HHsearch alignment for GI: 254780934 and conserved domain: TIGR02877
>TIGR02877 spore_yhbH sporulation protein YhbH; InterPro: IPR014230 Proteins in this entry, typified by YhbH from Bacillus subtilis, are found in the genomes of nearly every endospore-forming bacterium, and in no other genomes. The gene in Bacillus subtilis was shown to be a member of the sigma-E regulon, with mutation leading to a sporulation defect ..
Probab=95.90 E-value=0.077 Score=29.55 Aligned_cols=163 Identities=15% Similarity=0.188 Sum_probs=85.8
Q ss_pred CEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf 72499996578645113135313799999988763221002366567348999982685056102047868999998601
Q gi|254780934|r 171 RLDMMIVLDVSRSMESFFDSSITKIDMAIKSINAMLEEVKLIPDVNNVVQSGLVTFSNKIEEFFLLEWGVSHLQRKIKYL 250 (374)
Q Consensus 171 ~~di~~VlD~SgSM~~~~~~~~~ki~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~i~~l 250 (374)
T Consensus 214 ~AVvi~mMDtSGSMg~~------kKYiARSfFFw~~kFlr~K---Y~~VeI~FisH~TeAkEV~Ee--------~FF~kg 276 (392)
T TIGR02877 214 KAVVIAMMDTSGSMGEF------KKYIARSFFFWMVKFLRTK---YENVEIVFISHHTEAKEVTEE--------EFFTKG 276 (392)
T ss_pred CEEEEEEECCCCCCCCC------HHHHHHHHHHHHHHHHHHE---EEEEEEEEEEECCCCEEECHH--------HCCCCC
T ss_conf 73777764478898873------1678888999999886320---014789997104521240166--------601325
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHH-HHCCC----EE---
Q ss_conf 33687744420367677643222333310257886564279998068778888806899999999-97898----79---
Q gi|254780934|r 251 SKFGVSTNSTPGLKYAYNQIFDMQGMRQHCNTEDANYKKIIVFMTDGENLSTKEDQQSLYYCNEA-KKRGA----IV--- 322 (374)
Q Consensus 251 ~~~g~~T~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~k~iillTDG~~~~~~~~~~~~~~~~~~-k~~gi----~I--- 322 (374)
T Consensus 277 --ESGGT~~SS~Y~~ALeiI~~RY--------nP~~yNiY~FHfSDGDNl~~Dn~Rlav~l~~~L~~~cNL~GYgEIEtq 346 (392)
T TIGR02877 277 --ESGGTRCSSAYKLALEIIDERY--------NPARYNIYAFHFSDGDNLSSDNERLAVKLVRKLLEVCNLFGYGEIETQ 346 (392)
T ss_pred --CCCCCCHHHHHHHHHHHHHCCC--------CCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECC
T ss_conf --6677430167889999974278--------831006565355337788988646899999999887611110566056
Q ss_pred ---EEEEECCCC--CHHHHHHHCCCCCE--EEECCHHHHHHHHHHH
Q ss_conf ---999924822--27889982389817--9838989999999999
Q gi|254780934|r 323 ---YAIGIRVIR--SHEFLRACASPNSF--YLVENPHSMYDAFSHI 361 (374)
Q Consensus 323 ---ytIg~~~~~--~~~~L~~~As~~~~--~~a~~~~~L~~~f~~I 361 (374)
T Consensus 347 Pqyls~~Y~y~~tL~~~f~~ei~-~~~Fv~~~I~~K~d~y~ALk~~ 391 (392)
T TIGR02877 347 PQYLSMPYGYSSTLKSKFKKEIK-DPNFVLLIIKDKEDVYPALKKF 391 (392)
T ss_pred CCEECCCCCCCHHHHHHHHHHHC-CCCCEEEEECCHHHHHHHHHHH
T ss_conf 51103788665577888887405-8883587650414689999983