HHsearch alignment for GI: 254780934 and conserved domain: cd01451
>cd01451 vWA_Magnesium_chelatase Magnesium chelatase: Mg-chelatase catalyses the insertion of Mg into protoporphyrin IX (Proto). In chlorophyll biosynthesis, insertion of Mg2+ into protoporphyrin IX is catalysed by magnesium chelatase in an ATP-dependent reaction. Magnesium chelatase is a three sub-unit (BchI, BchD and BchH) enzyme with a novel arrangement of domains: the C-terminal helical domain is located behind the nucleotide binding site. The BchD domain contains a AAA domain at its N-terminus and a VWA domain at its C-terminus. The VWA domain has been speculated to be involved in mediating protein-protein interactions.
Probab=99.86 E-value=1.3e-19 Score=135.46 Aligned_cols=166 Identities=19% Similarity=0.254 Sum_probs=129.8
Q ss_pred EEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEC-CCCEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 999965786451131353137999999887632210023665673489999826-8505610204786899999860133
Q gi|254780934|r 174 MMIVLDVSRSMESFFDSSITKIDMAIKSINAMLEEVKLIPDVNNVVQSGLVTFS-NKIEEFFLLEWGVSHLQRKIKYLSK 252 (374)
Q Consensus 174 i~~VlD~SgSM~~~~~~~~~ki~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~t~~~~~~~~~i~~l~~ 252 (374)
T Consensus 3 vvfvvD~SGSM~~~-----~rl~~aK~a~~~ll~d~-----~~~~D~v~lv~F~g~~a~~~lppT~~~~~~~~~l~~L~~ 72 (178)
T cd01451 3 VIFVVDASGSMAAR-----HRMAAAKGAVLSLLRDA-----YQRRDKVALIAFRGTEAEVLLPPTRSVELAKRRLARLPT 72 (178)
T ss_pred EEEEEECCCCCCCC-----CHHHHHHHHHHHHHHHH-----CCCCCEEEEEEECCCCCEEECCCCCCHHHHHHHHHCCCC
T ss_conf 99999898788875-----67999999999999974-----346788999997597555856887657999998721678
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCHH--HHHHHHHHHHCCCEEEEEEECCC
Q ss_conf 6877444203676776432223333102578865642799980687788888068--99999999978987999992482
Q gi|254780934|r 253 FGVSTNSTPGLKYAYNQIFDMQGMRQHCNTEDANYKKIIVFMTDGENLSTKEDQQ--SLYYCNEAKKRGAIVYAIGIRVI 330 (374)
Q Consensus 253 ~g~~T~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~k~iillTDG~~~~~~~~~~--~~~~~~~~k~~gi~IytIg~~~~ 330 (374)
T Consensus 73 gG-~T~l~~gL~~a~~~~~~~~--------~~~~~~~~iiLlTDG~~N~g~~~~~~~~~~~a~~~~~~gi~~~vId~~~~ 143 (178)
T cd01451 73 GG-GTPLAAGLLAAYELAAEQA--------RDPGQRPLIVVITDGRANVGPDPTADRALAAARKLRARGISALVIDTEGR 143 (178)
T ss_pred CC-CCCHHHHHHHHHHHHHHHC--------CCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCC
T ss_conf 89-8519999999999999850--------27898439999846986679995126999999999866997899979999
Q ss_pred C-CHHHHHHHC--CCCCEEEECCH--HHHHHHH
Q ss_conf 2-278899823--89817983898--9999999
Q gi|254780934|r 331 R-SHEFLRACA--SPNSFYLVENP--HSMYDAF 358 (374)
Q Consensus 331 ~-~~~~L~~~A--s~~~~~~a~~~--~~L~~~f 358 (374)
T Consensus 144 ~~~~~~~~~LA~~~~g~Y~~id~l~~~~i~~~v 176 (178)
T cd01451 144 PVRRGLAKDLARALGGQYVRLPDLSADAIASAV 176 (178)
T ss_pred CCCHHHHHHHHHHCCCCEEECCCCCHHHHHHHH
T ss_conf 767489999999429969989979988999987