HHsearch alignment for GI: 254780934 and conserved domain: cd01464

>cd01464 vWA_subfamily VWA subfamily: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if
Probab=99.88  E-value=2.9e-21  Score=145.17  Aligned_cols=173  Identities=18%  Similarity=0.205  Sum_probs=131.5

Q ss_pred             CEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf             72499996578645113135313799999988763221002366567348999982685056102047868999998601
Q gi|254780934|r  171 RLDMMIVLDVSRSMESFFDSSITKIDMAIKSINAMLEEVKLIPDVNNVVQSGLVTFSNKIEEFFLLEWGVSHLQRKIKYL  250 (374)
Q Consensus       171 ~~di~~VlD~SgSM~~~~~~~~~ki~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~i~~l  250 (374)
T Consensus         3 rlpvvlvlD~SGSM~G~------~i~~~k~al~~~~~~L~~d~~a~~~~~vsVItF~s~a~~~~pl~~~---~~~~~~~L   73 (176)
T cd01464           3 RLPIYLLLDTSGSMAGE------PIEALNQGLQMLQSELRQDPYALESVEISVITFDSAARVIVPLTPL---ESFQPPRL   73 (176)
T ss_pred             CCCEEEEEECCCCCCCH------HHHHHHHHHHHHHHHHHCCCCCHHEEEEEEEEECCCEEEECCCCCH---HHCCCCCC
T ss_conf             35789999789999984------7999999999999997118310113269999978951780586347---66475547


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCC
Q ss_conf             33687744420367677643222333310257886564279998068778888806899999999978987999992482
Q gi|254780934|r  251 SKFGVSTNSTPGLKYAYNQIFDMQGMRQHCNTEDANYKKIIVFMTDGENLSTKEDQQSLYYCNEAKKRGAIVYAIGIRVI  330 (374)
Q Consensus       251 ~~~g~~T~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~k~iillTDG~~~~~~~~~~~~~~~~~~k~~gi~IytIg~~~~  330 (374)
T Consensus        74 ~a~G-~T~~g~al~~a~~~l~~~~~~~~--~~~~~~~~P~I~LlTDG~PtD--~~~~~~~~~~~~~~~~~~i~a~giG~d  148 (176)
T cd01464          74 TASG-GTSMGAALELALDCIDRRVQRYR--ADQKGDWRPWVFLLTDGEPTD--DLTAAIERIKEARDSKGRIVACAVGPK  148 (176)
T ss_pred             CCCC-CCHHHHHHHHHHHHHHHHHHHCC--CCCCCCCCEEEEEECCCCCCC--CHHHHHHHHHHHHHCCCEEEEEEEECC
T ss_conf             7789-98199999999999998652236--556677531799966899887--589999999988863976999997387


Q ss_pred             CCHHHHHHHCCCCCEEEECCHHHHHHHHH
Q ss_conf             22788998238981798389899999999
Q gi|254780934|r  331 RSHEFLRACASPNSFYLVENPHSMYDAFS  359 (374)
Q Consensus       331 ~~~~~L~~~As~~~~~~a~~~~~L~~~f~  359 (374)
T Consensus       149 ad~~~L~~is~~--~~~~~~~~~f~~ff~  175 (176)
T cd01464         149 ADLDTLKQITEG--VPLLDDALSGLNFFK  175 (176)
T ss_pred             CCHHHHHHHHCC--CCCCCCHHHHHHHHC
T ss_conf             189999988577--745345345888508