HHsearch alignment for GI: 254780934 and conserved domain: cd01467

>cd01467 vWA_BatA_type VWA BatA type: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses. In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if
Probab=99.96  E-value=3.7e-27  Score=180.27  Aligned_cols=164  Identities=21%  Similarity=0.264  Sum_probs=136.7

Q ss_pred             CEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCEEEEECCCCHHHHHHHHHHC
Q ss_conf             72499996578645113135313799999988763221002366567348999982685056102047868999998601
Q gi|254780934|r  171 RLDMMIVLDVSRSMESFFDSSITKIDMAIKSINAMLEEVKLIPDVNNVVQSGLVTFSNKIEEFFLLEWGVSHLQRKIKYL  250 (374)
Q Consensus       171 ~~di~~VlD~SgSM~~~~~~~~~ki~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~i~~l  250 (374)
T Consensus         2 G~dvvlvlD~SgSM~~~d~~~~~rl~~ak~~~~~~i~~~~-------~drvglv~Fs~~a~~~~plT~d~~~~~~~l~~i   74 (180)
T cd01467           2 GRDIMIALDVSGSMLAQDFVKPSRLEAAKEVLSDFIDRRE-------NDRIGLVVFAGAAFTQAPLTLDRESLKELLEDI   74 (180)
T ss_pred             CCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC-------CCEEEEEEECCCCEEECCCCCCHHHHHHHHHCC
T ss_conf             6279999989847578666785899999999999997199-------975999997287367337665689999998622


Q ss_pred             CC--CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEC
Q ss_conf             33--6877444203676776432223333102578865642799980687788888068999999999789879999924
Q gi|254780934|r  251 SK--FGVSTNSTPGLKYAYNQIFDMQGMRQHCNTEDANYKKIIVFMTDGENLSTKEDQQSLYYCNEAKKRGAIVYAIGIR  328 (374)
Q Consensus       251 ~~--~g~~T~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~k~iillTDG~~~~~~~~~~~~~~~~~~k~~gi~IytIg~~  328 (374)
T Consensus        75 ~~~~~~ggT~i~~al~~a~~~l~~~-----------~~~~~~ivLlTDG~~n~g~~~--~~~~~~~a~~~gi~v~tIGvG  141 (180)
T cd01467          75 KIGLAGQGTAIGDAIGLAIKRLKNS-----------EAKERVIVLLTDGENNAGEID--PATAAELAKNKGVRIYTIGVG  141 (180)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHCC-----------CCCCCEEEEEECCCCCCCCCC--HHHHHHHHHHCCCEEEEEEEC
T ss_conf             4453236860899999999976424-----------766637999805886678769--999999999769989999977


Q ss_pred             CCC-----------CHHHHHHHC--CCCCEEEECCHHHH
Q ss_conf             822-----------278899823--89817983898999
Q gi|254780934|r  329 VIR-----------SHEFLRACA--SPNSFYLVENPHSM  354 (374)
Q Consensus       329 ~~~-----------~~~~L~~~A--s~~~~~~a~~~~~L  354 (374)
T Consensus       142 ~~~~~~~~~~~~~~d~~~L~~iA~~tgG~yy~a~~~~eL  180 (180)
T cd01467         142 KSGSGPKPDGSTILDEDSLVEIADKTGGRIFRALDGFEL  180 (180)
T ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCHHHC
T ss_conf             898887688876559999999999619979972874649