HHsearch alignment for GI: 254780934 and conserved domain: pfam00092

Probab=99.83  E-value=1.5e-18  Score=129.07  Aligned_cols=170  Identities=23%  Similarity=0.318  Sum_probs=129.3

Q ss_pred             EEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCEEEEECCCCH--HHHHHHH-HH
Q ss_conf             49999657864511313531379999998876322100236656734899998268505610204786--8999998-60
Q gi|254780934|r  173 DMMIVLDVSRSMESFFDSSITKIDMAIKSINAMLEEVKLIPDVNNVVQSGLVTFSNKIEEFFLLEWGV--SHLQRKI-KY  249 (374)
Q Consensus       173 di~~VlD~SgSM~~~~~~~~~ki~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~--~~~~~~i-~~  249 (374)
T Consensus         1 Di~fvlD~S~Sm~~~------~~~~~k~~~~~~i~~~~---~~~~~~rv~lv~f~~~~~~~~~l~~~~~~~~~~~~~~~~   71 (177)
T pfam00092         1 DIVFLLDGSGSIGEA------NFEKVKEFIKKLVENLD---IGPDGTRVGLVQYSSDVTTEFSLNDYKSKDDLLSAVLRN   71 (177)
T ss_pred             CEEEEEECCCCCCHH------HHHHHHHHHHHHHHHHC---CCCCCCEEEEEEECCCEEEEECCCCCCCHHHHHHHHHHH
T ss_conf             989999687998868------89999999999999836---588752899999458458996178868999999998643


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECC
Q ss_conf             13368774442036767764322233331025788656427999806877888880689999999997898799999248
Q gi|254780934|r  250 LSKFGVSTNSTPGLKYAYNQIFDMQGMRQHCNTEDANYKKIIVFMTDGENLSTKEDQQSLYYCNEAKKRGAIVYAIGIRV  329 (374)
Q Consensus       250 l~~~g~~T~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~k~iillTDG~~~~~~~~~~~~~~~~~~k~~gi~IytIg~~~  329 (374)
T Consensus        72 ~~~~~g~t~~~~al~~a~~~~~~~~-------~~r~~~~k~vvllTDG~~~~~~~~~~--~~~~~~~~~gI~v~~vG~g-  141 (177)
T pfam00092        72 IYYLGGGTNTGKALKYALENLFRSA-------GSRPNAPKVVILLTDGKSNDGGLVPA--AAAALRRKVGIIVFGVGVG-  141 (177)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHCC-------CCCCCCEEEEEEEECCCCCCCCCCHH--HHHHHHHHCCCEEEEEECC-
T ss_conf             1578995659999999999986354-------78878726899983698788864699--9999999789589999747-


Q ss_pred             CCCHHHHHHHCC----CCCEEEECCHHHHHHHHHHH
Q ss_conf             222788998238----98179838989999999999
Q gi|254780934|r  330 IRSHEFLRACAS----PNSFYLVENPHSMYDAFSHI  361 (374)
Q Consensus       330 ~~~~~~L~~~As----~~~~~~a~~~~~L~~~f~~I  361 (374)
T Consensus       142 ~~~~~~L~~ia~~~~~~~~~~~~~~~~~l~~~~~~i  177 (177)
T pfam00092       142 DVDEEELRLIASEPCSEGHVFYVTDFDALSDIQEEL  177 (177)
T ss_pred             CCCHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHC
T ss_conf             448999999968999898599958989999999619