HHsearch alignment for GI: 254780934 and conserved domain: pfam05762
>pfam05762 VWA_CoxE VWA domain containing CoxE-like protein. This family is annotated by SMART as containing a VWA type domain. The exact function of this family is unknown. It is found as part of a CO oxidising (Cox) system operon is several bacteria.
Probab=98.10 E-value=7.7e-05 Score=47.42 Aligned_cols=131 Identities=15% Similarity=0.198 Sum_probs=75.4
Q ss_pred CCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCEEEEECC--CCHHHHHHH
Q ss_conf 787249999657864511313531379999998876322100236656734899998268505610204--786899999
Q gi|254780934|r 169 DARLDMMIVLDVSRSMESFFDSSITKIDMAIKSINAMLEEVKLIPDVNNVVQSGLVTFSNKIEEFFLLE--WGVSHLQRK 246 (374)
Q Consensus 169 ~~~~di~~VlD~SgSM~~~~~~~~~ki~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t--~~~~~~~~~ 246 (374)
T Consensus 55 ~~p~~lVvl~DVSGSM~~ys-----~~--~L~~~~al~~~~---------~rv~~F~F~t~l~~vT~~l~~~d~~~al~~ 118 (223)
T pfam05762 55 RKPRRLVLLLDVSGSMADYS-----RI--FLALLHALLAGR---------PRTRLFAFGTRLTDLTRALRERDPAEALLR 118 (223)
T ss_pred CCCCCEEEEECCCCCCHHHH-----HH--HHHHHHHHHHCC---------CCCEEEEEECCHHHHHHHHHCCCHHHHHHH
T ss_conf 89875899973788749999-----99--999999998546---------861599983648988888712899999999
Q ss_pred HHHC-CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEEE
Q ss_conf 8601-336877444203676776432223333102578865642799980687788888068999999999789879999
Q gi|254780934|r 247 IKYL-SKFGVSTNSTPGLKYAYNQIFDMQGMRQHCNTEDANYKKIIVFMTDGENLSTKEDQQSLYYCNEAKKRGAIVYAI 325 (374)
Q Consensus 247 i~~l-~~~g~~T~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~k~iillTDG~~~~~~~~~~~~~~~~~~k~~gi~IytI 325 (374)
T Consensus 119 ~~~~~~~~~GgT~ig~al~~f~~~~~----------~~~l~~~t~ViilsDg~~~~~--~~~l~~~l~~L~~~~~rviWL 186 (223)
T pfam05762 119 VSARVEDWGGGTRIGAALAYFNELWT----------RPALSRGAVVVLVSDGLERGD--SEELLAEVARLVRSARRLVWL 186 (223)
T ss_pred HHHHHCCCCCCCCHHHHHHHHHHHCC----------CCCCCCCCEEEEEECCCCCCC--HHHHHHHHHHHHHHCCEEEEE
T ss_conf 99860366799749999999998503----------034678867999723010388--318999999999837879998
Q ss_pred EE
Q ss_conf 92
Q gi|254780934|r 326 GI 327 (374)
Q Consensus 326 g~ 327 (374)
T Consensus 187 NP 188 (223)
T pfam05762 187 NP 188 (223)
T ss_pred CC
T ss_conf 99