HHsearch alignment for GI: 254780934 and conserved domain: pfam05762

>pfam05762 VWA_CoxE VWA domain containing CoxE-like protein. This family is annotated by SMART as containing a VWA type domain. The exact function of this family is unknown. It is found as part of a CO oxidising (Cox) system operon is several bacteria.
Probab=98.10  E-value=7.7e-05  Score=47.42  Aligned_cols=131  Identities=15%  Similarity=0.198  Sum_probs=75.4

Q ss_pred             CCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCEEEEECC--CCHHHHHHH
Q ss_conf             787249999657864511313531379999998876322100236656734899998268505610204--786899999
Q gi|254780934|r  169 DARLDMMIVLDVSRSMESFFDSSITKIDMAIKSINAMLEEVKLIPDVNNVVQSGLVTFSNKIEEFFLLE--WGVSHLQRK  246 (374)
Q Consensus       169 ~~~~di~~VlD~SgSM~~~~~~~~~ki~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t--~~~~~~~~~  246 (374)
T Consensus        55 ~~p~~lVvl~DVSGSM~~ys-----~~--~L~~~~al~~~~---------~rv~~F~F~t~l~~vT~~l~~~d~~~al~~  118 (223)
T pfam05762        55 RKPRRLVLLLDVSGSMADYS-----RI--FLALLHALLAGR---------PRTRLFAFGTRLTDLTRALRERDPAEALLR  118 (223)
T ss_pred             CCCCCEEEEECCCCCCHHHH-----HH--HHHHHHHHHHCC---------CCCEEEEEECCHHHHHHHHHCCCHHHHHHH
T ss_conf             89875899973788749999-----99--999999998546---------861599983648988888712899999999


Q ss_pred             HHHC-CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEEE
Q ss_conf             8601-336877444203676776432223333102578865642799980687788888068999999999789879999
Q gi|254780934|r  247 IKYL-SKFGVSTNSTPGLKYAYNQIFDMQGMRQHCNTEDANYKKIIVFMTDGENLSTKEDQQSLYYCNEAKKRGAIVYAI  325 (374)
Q Consensus       247 i~~l-~~~g~~T~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~k~iillTDG~~~~~~~~~~~~~~~~~~k~~gi~IytI  325 (374)
T Consensus       119 ~~~~~~~~~GgT~ig~al~~f~~~~~----------~~~l~~~t~ViilsDg~~~~~--~~~l~~~l~~L~~~~~rviWL  186 (223)
T pfam05762       119 VSARVEDWGGGTRIGAALAYFNELWT----------RPALSRGAVVVLVSDGLERGD--SEELLAEVARLVRSARRLVWL  186 (223)
T ss_pred             HHHHHCCCCCCCCHHHHHHHHHHHCC----------CCCCCCCCEEEEEECCCCCCC--HHHHHHHHHHHHHHCCEEEEE
T ss_conf             99860366799749999999998503----------034678867999723010388--318999999999837879998


Q ss_pred             EE
Q ss_conf             92
Q gi|254780934|r  326 GI  327 (374)
Q Consensus       326 g~  327 (374)
T Consensus       187 NP  188 (223)
T pfam05762       187 NP  188 (223)
T ss_pred             CC
T ss_conf             99