HHsearch results for GI: 254780934 and protein with PDBid: 1jey_A
>1jey_A KU70; double-strand DNA break repair, non-homologous END-joining, protein/nucleic acid complex, alpha/beta domain, beta barrel; HET: DNA; 2.50A {Homo sapiens} SCOP: b.131.1.1 c.62.1.3 PDB: 1jeq_A*
Probab=97.54 E-value=0.0033 Score=36.39 Aligned_cols=147 Identities=13% Similarity=0.144 Sum_probs=78.6
Q ss_pred EEEEEEECCCCCCCCCCC-CCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCE----------EEEECCCCH
Q ss_conf 249999657864511313-531379999998876322100236656734899998268505----------610204786
Q gi|254780934|r 172 LDMMIVLDVSRSMESFFD-SSITKIDMAIKSINAMLEEVKLIPDVNNVVQSGLVTFSNKIE----------EFFLLEWGV 240 (374)
Q Consensus 172 ~di~~VlD~SgSM~~~~~-~~~~ki~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~t~~~ 240 (374)
=.|+|++|.|-||-...+ .....++.+...+..++...--. .....+|++-|++... ...++..-.
T Consensus 36 e~iiflID~s~sM~~~~~~~~~s~~~~al~~i~~l~~~kIi~---~~kD~vgvvl~gt~~t~n~~~~~ni~v~~~l~~p~ 112 (609)
T 1jey_A 36 DSLIFLVDASKAMFESQSEDELTPFDMSIQCIQSVYISKIIS---SDRDLLAVVFYGTEKDKNSVNFKNIYVLQELDNPG 112 (609)
T ss_dssp EEEEEEEECSGGGGCCCSSSSCCHHHHHHHHHHHHHHHHHHT---TCCCEEEEEEESCSSCBSTTCCTTEEEEEEEECCC
T ss_pred EEEEEEEECCHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCC---CCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCC
T ss_conf 589999989888868788888785999999999999844767---99984999997578988878988569960488889
Q ss_pred HHHHHHHHHCC------------CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCH--
Q ss_conf 89999986013------------3687744420367677643222333310257886564279998068778888806--
Q gi|254780934|r 241 SHLQRKIKYLS------------KFGVSTNSTPGLKYAYNQIFDMQGMRQHCNTEDANYKKIIVFMTDGENLSTKEDQ-- 306 (374)
Q Consensus 241 ~~~~~~i~~l~------------~~g~~T~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~k~iillTDG~~~~~~~~~-- 306 (374)
......+..+. ..+....+..++..+.+++... ......|.|+|+||+.+-...+..
T Consensus 113 ~~~ik~L~~l~~~~~~~~~~~~~~~~~~~~l~~aL~~~~~~f~~~---------~~k~~~krI~lfTd~d~P~~~d~~~~ 183 (609)
T 1jey_A 113 AKRILELDQFKGQQGQKRFQDMMGHGSDYSLSEVLWVCANLFSDV---------QFKMSHKRIMLFTNEDNPHGNDSAKA 183 (609)
T ss_dssp HHHHHHHHTTSHHHHHHHHHHHHCCSCCCCHHHHHHHHHHHHHTC---------SSCEEEEEEEEEESCSCTTTTCHHHH
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH---------CCCCCCCEEEEECCCCCCCCCCHHHH
T ss_conf 899999997641234310002567665446999999999999860---------20236757999868998788851779
Q ss_pred -HHHHHHHHHHHCCCEEEEEEECCC
Q ss_conf -899999999978987999992482
Q gi|254780934|r 307 -QSLYYCNEAKKRGAIVYAIGIRVI 330 (374)
Q Consensus 307 -~~~~~~~~~k~~gi~IytIg~~~~ 330 (374)
.....+..+++.||.|..+.++.+
T Consensus 184 ~~~~~~~~dl~~~gI~i~~~~i~~~ 208 (609)
T 1jey_A 184 SRARTKAGDLRDTGIFLDLMHLKKP 208 (609)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEBCCT
T ss_pred HHHHHHHHHHHHHCCEEEEECCCCC
T ss_conf 9999999999970905777335788