HHsearch results for GI: 254780934 and protein with PDBid: 2x5n_A
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=99.78 E-value=2.4e-17 Score=120.57 Aligned_cols=153 Identities=15% Similarity=0.149 Sum_probs=122.4
Q ss_pred EEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCC-EEEEECCCCHHHHHHHHHHC
Q ss_conf 24999965786451131353137999999887632210023665673489999826850-56102047868999998601
Q gi|254780934|r 172 LDMMIVLDVSRSMESFFDSSITKIDMAIKSINAMLEEVKLIPDVNNVVQSGLVTFSNKI-EEFFLLEWGVSHLQRKIKYL 250 (374)
Q Consensus 172 ~di~~VlD~SgSM~~~~~~~~~ki~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~t~~~~~~~~~i~~l 250 (374)
-.+++|+|.||||... +..+.|++.+|+++..+++.+....+ ..+++++.|.... ....+++.++..+...++.+
T Consensus 3 ea~viviD~S~SM~~~-D~~p~Rl~~ak~a~~~li~~~~~~~~---~~~vg~v~~~~~~~~~~~~~~~~~~~~~~~i~~l 78 (192)
T 2x5n_A 3 EATMILIDNSEWMING-DYIPTRFEAQKDTVHMIFNQKINDNP---ENMCGLMTIGDNSPQVLSTLTRDYGKFLSAMHDL 78 (192)
T ss_dssp EEEEEEECCSGGGGCT-TSSSCHHHHHHHHHHHHHHHHHHHCT---TCEEEEEECCTTSCCEEEEEESCHHHHHHHHTTC
T ss_pred EEEEEEEECCHHHCCC-CCCCCHHHHHHHHHHHHHHHHHHCCC---CCEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCC
T ss_conf 7999999898554378-98978999999999999998764597---7749998605764301478840899999874023
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCC
Q ss_conf 33687744420367677643222333310257886564279998068778888806899999999978987999992482
Q gi|254780934|r 251 SKFGVSTNSTPGLKYAYNQIFDMQGMRQHCNTEDANYKKIIVFMTDGENLSTKEDQQSLYYCNEAKKRGAIVYAIGIRVI 330 (374)
Q Consensus 251 ~~~g~~T~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~k~iillTDG~~~~~~~~~~~~~~~~~~k~~gi~IytIg~~~~ 330 (374)
.+.| +|+++.|+..|+..+... .....++.++++|||..+. +.......++.+++.||+||+||||.+
T Consensus 79 ~~~G-~T~l~~al~~A~~~l~~~---------~~~~~~~~iil~tdg~~~~--~~~~~~~~a~~~~~~~i~i~~Ig~G~~ 146 (192)
T 2x5n_A 79 PVRG-NAKFGDGIQIAQLALKHR---------ENKIQRQRIVAFVGSPIVE--DEKNLIRLAKRMKKNNVAIDIIHIGEL 146 (192)
T ss_dssp CCCS-CCCHHHHHHHHHHHHHTC---------SCTTSEEEEEEEECSCCSS--CHHHHHHHHHHHHHTTEEEEEEEESCC
T ss_pred CCCC-CCCCCHHHHHHHHHHHHH---------HHCCCCEEEEEEECCCCCC--CHHHHHHHHHHHCCCCCEEEEEEEECC
T ss_conf 4468-765227999999999862---------1104650699996889753--067899999985135750799997176
Q ss_pred CCHHHHHHHC
Q ss_conf 2278899823
Q gi|254780934|r 331 RSHEFLRACA 340 (374)
Q Consensus 331 ~~~~~L~~~A 340 (374)
.+.+.|+.++
T Consensus 147 ~~~~~l~~~~ 156 (192)
T 2x5n_A 147 QNESALQHFI 156 (192)
T ss_dssp ---CHHHHHH
T ss_pred CCHHHHHHHH
T ss_conf 7879999999