HHsearch results for GI: 254780934 and protein with PDBid: 3eh1_A

>3eh1_A Protein transport protein SEC24B; copii coat protein, vesicle transport, transport signal sequence, cytoplasm, endoplasmic reticulum; 1.80A {Homo sapiens} PDB: 2nut_B 2nup_B 3egd_B 3egx_B
Probab=97.02  E-value=0.014  Score=32.75  Aligned_cols=175  Identities=12%  Similarity=0.099  Sum_probs=106.2

Q ss_pred             CCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCEE-----------------
Q ss_conf             872499996578645113135313799999988763221002366567348999982685056-----------------
Q gi|254780934|r  170 ARLDMMIVLDVSRSMESFFDSSITKIDMAIKSINAMLEEVKLIPDVNNVVQSGLVTFSNKIEE-----------------  232 (374)
Q Consensus       170 ~~~di~~VlD~SgSM~~~~~~~~~ki~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------  232 (374)
                      .+--++||+|.|.+....     ..++.+++++...++.+..    ....+++++.|+..+..                 
T Consensus       159 ~pp~~vfvID~S~~a~~~-----g~l~~~~~ai~~~l~~l~~----~~~~~VglItf~~~V~~~~~~~~~~~~~~~v~~d  229 (751)
T 3eh1_A          159 QPAVYLFVLDVSHNAVEA-----GYLTILCQSLLENLDKLPG----DSRTRIGFMTFDSTIHFYNLQEGLSQPQMLIVSD  229 (751)
T ss_dssp             CCCEEEEEEECSHHHHHH-----THHHHHHHHHHHHTTTSSC----CTTCEEEEEEESSSEEEEECCTTCSSCEEEEESC
T ss_pred             CCCEEEEEEECCHHHHHH-----HHHHHHHHHHHHHHHHCCC----CCCEEEEEEEECCEEEEEECCCCCCCCEEEEECC
T ss_conf             986899999896578661-----4999999999999974778----8760899999899789984689866532674148


Q ss_pred             ------------EEECCCCHHHHHHHHHHCCCC-----CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEE
Q ss_conf             ------------102047868999998601336-----877444203676776432223333102578865642799980
Q gi|254780934|r  233 ------------FFLLEWGVSHLQRKIKYLSKF-----GVSTNSTPGLKYAYNQIFDMQGMRQHCNTEDANYKKIIVFMT  295 (374)
Q Consensus       233 ------------~~~~t~~~~~~~~~i~~l~~~-----g~~T~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~k~iillT  295 (374)
                                  ..++...+..+...++.|...     ..++..+.++..+...+...              --.+++++
T Consensus       230 ~~~~~~p~~~~~l~~l~e~~~~i~~~L~~L~~~~~~~~~~~~~lg~Al~~a~~~l~~~--------------gG~i~~f~  295 (751)
T 3eh1_A          230 IDDVFLPTPDSLLVNLYESKELIKDLLNALPNMFTNTRETHSALGPALQAAFKLMSPT--------------GGRVSVFQ  295 (751)
T ss_dssp             TTCTTSCCGGGTSEETTTTHHHHHHHHHHGGGTSTTCSCCCCCHHHHHHHHHHHHTTT--------------CEEEEEEE
T ss_pred             CCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHC--------------CCEEEEEE
T ss_conf             6312467876468437998999999998545541488776410899999999988732--------------97599995


Q ss_pred             CCCCCCCC-----------------------CCHHHHHHHHHHHHCCCEEEEEEECCC-CCHHHHHHHC--CCCCEEEEC
Q ss_conf             68778888-----------------------806899999999978987999992482-2278899823--898179838
Q gi|254780934|r  296 DGENLSTK-----------------------EDQQSLYYCNEAKKRGAIVYAIGIRVI-RSHEFLRACA--SPNSFYLVE  349 (374)
Q Consensus       296 DG~~~~~~-----------------------~~~~~~~~~~~~k~~gi~IytIg~~~~-~~~~~L~~~A--s~~~~~~a~  349 (374)
                      +|.++.|.                       ...-...++..+.+.||.|.-+.+..+ .+-..|..++  |+|..|.-+
T Consensus       296 ~g~pt~GpG~l~~~~~~~~~~~~~~~~~~~~~~~fY~~la~~~~~~~isvdif~~s~~~~~l~~l~~l~~~TGG~v~~~~  375 (751)
T 3eh1_A          296 TQLPSLGAGLLQSREDPNQRSSTKVVQHLGPATDFYKKLALDCSGQQTAVDLFLLSSQYSDLASLACMSKYSAGCIYYYP  375 (751)
T ss_dssp             CSCCCSSTTCCCCCCCSCGGGGSSSCTTCSCSCSHHHHHHHHHHHTTEEEEEEECCSSCCCHHHHTHHHHTTTCCEEECT
T ss_pred             CCCCCCCCCCEECCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHCCCCEEEEEC
T ss_conf             67997889832126676667854567651405789999999999769479999945877787998889864786599936


Q ss_pred             C------HHHHHHHHHHHHHHHHE
Q ss_conf             9------89999999999984200
Q gi|254780934|r  350 N------PHSMYDAFSHIGKDIVT  367 (374)
Q Consensus       350 ~------~~~L~~~f~~I~~~i~~  367 (374)
                      +      ..++...++++.+.++.
T Consensus       376 ~f~~~~~~~~~~~l~~dl~~~l~~  399 (751)
T 3eh1_A          376 SFHYTHNPSQAEKLQKDLKRYLTR  399 (751)
T ss_dssp             TCBTTTBHHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf             866433657899999999987554