HHsearch results for GI: 254780934 and protein with PDBid: 3k6s_B
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=98.65 E-value=3e-07 Score=60.47 Aligned_cols=186 Identities=15% Similarity=0.184 Sum_probs=110.5
Q ss_pred EECCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCE------------
Q ss_conf 31037787249999657864511313531379999998876322100236656734899998268505------------
Q gi|254780934|r 164 VNSQTDARLDMMIVLDVSRSMESFFDSSITKIDMAIKSINAMLEEVKLIPDVNNVVQSGLVTFSNKIE------------ 231 (374)
Q Consensus 164 ~~~~~~~~~di~~VlD~SgSM~~~~~~~~~ki~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 231 (374)
.+...+-|+|+++++|.|+||... ++.+|.-...+...+... ...+|+|+-.|.+++.
T Consensus 97 ~~~~~~~pvdly~lmd~s~sm~~d-------~~~~~~~~~~l~~~~~~~---t~~~~~g~g~fvdk~~~p~~~~~p~~~~ 166 (687)
T 3k6s_B 97 FRRAKGYPIDLYYLMDLSYSMLDD-------LRNVKKLGGDLLRALNEI---TESGRIGFGSFVDKTVLPFVNTHPDKLR 166 (687)
T ss_dssp ECCCCCCCCEEEEEEECSSTTHHH-------HHTTTTCCTTHHHHHHSS---CCSCEEEEEEECCCSSTTSSCCSSTTTT
T ss_pred EECCCCCCCEEEEEEECCCCHHHH-------HHHHHHHHHHHHHHHHHH---CCCCEEECCCCCCCCCCCCCCCCHHHHC
T ss_conf 752788982089998367417889-------999999999999999863---8562760010123565875678877702
Q ss_pred -----------------EEEECCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEE
Q ss_conf -----------------610204786899999860133687744420367677643222333310257886564279998
Q gi|254780934|r 232 -----------------EFFLLEWGVSHLQRKIKYLSKFGVSTNSTPGLKYAYNQIFDMQGMRQHCNTEDANYKKIIVFM 294 (374)
Q Consensus 232 -----------------~~~~~t~~~~~~~~~i~~l~~~g~~T~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~k~iill 294 (374)
...++|.+...+...++.....| +-+..+|---|..+..-- .....+.+ .+++|||.
T Consensus 167 ~pc~~~~~~c~~~~~~~~~~~lt~~~~~f~~~~~~~~~~~-n~d~pe~~~da~~q~~~c---~~~igwr~--~~~~~~~~ 240 (687)
T 3k6s_B 167 NPCPNKEKECQPPFAFRHVLKLTNNSNQFQTEVGKQLISG-NLDAPEGGLDAMMQVAAC---PEEIGWRN--VTRLLVFA 240 (687)
T ss_dssp CCCCSCCCCCCCCCSCEEEEEEESCSHHHHHHHHTSCCCC-CSSSSCCHHHHHHHHTTC---HHHHCCCS--SCCEEEEE
T ss_pred CCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHEEEEC-CCCCCCCHHHHHHHHHHC---CCCCCCCC--CEEEEEEE
T ss_conf 8887888776788341542256677899999875167035-776865016688887750---22236457--54899998
Q ss_pred ECCCCCCCC----------------------------CCHHHHHHHHHHHHCCCE-EEEEEECCCCCHHHHHHHCCCCCE
Q ss_conf 068778888----------------------------806899999999978987-999992482227889982389817
Q gi|254780934|r 295 TDGENLSTK----------------------------EDQQSLYYCNEAKKRGAI-VYAIGIRVIRSHEFLRACASPNSF 345 (374)
Q Consensus 295 TDG~~~~~~----------------------------~~~~~~~~~~~~k~~gi~-IytIg~~~~~~~~~L~~~As~~~~ 345 (374)
||...+... ++...-++...+++++|. ||+|.=....-.+.|...-.++.+
T Consensus 241 td~~~h~agdg~l~gi~~pnd~~chl~~~~y~~~~~~dyps~~~~~~~~~~~~i~~ifavt~~~~~~y~~l~~~~~~~~~ 320 (687)
T 3k6s_B 241 TDDGFHFAGDGKLGAILTPNDGRCHLEDNLYKRSNEFDYPSVGQLAHKLAENNIQPIFAVTSRMVKTYEKLTEIIPKSAV 320 (687)
T ss_dssp CSSCCCCTTGGGGGTCCCCCCSCCCCSSSBCSSGGGSCCCCGGGHHHHHHHTTCBCCEEECGGGHHHHHHHHHHSSSCCE
T ss_pred CCCCCCCCCCCCCCEECCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCEE
T ss_conf 16874426764231040478873170488303566667789899999998649259999766444368999975577504
Q ss_pred E-EECCHH---H-HHHHHHHHHHHH
Q ss_conf 9-838989---9-999999999842
Q gi|254780934|r 346 Y-LVENPH---S-MYDAFSHIGKDI 365 (374)
Q Consensus 346 ~-~a~~~~---~-L~~~f~~I~~~i 365 (374)
- .+.+.. + +.++|++|...+
T Consensus 321 ~~l~~ds~ni~~li~~~y~~i~s~v 345 (687)
T 3k6s_B 321 GELSEDSSNVVQLIKNAYNKLSSRV 345 (687)
T ss_dssp EECCTTCCSCGGGTTTHHHHHSSCC
T ss_pred EEECCCCHHHHHHHHHHHHHHHCEE
T ss_conf 7614664779999999998651379