PSIBLAST alignment of GI: 254780934 and protein with PDB id: 1n3y
>gi|28948724|pdb|1N3Y|A Chain A, Crystal Structure Of The Alpha-X Beta2 Integrin I Domain Length = 198
Score = 58.7 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 73/211 (34%), Gaps = 28/211 (13%)
Query: 164 VNSQTDARLDMMIVLDVSRSMESFFDSSITKIDMAIKSINAMLEEVKLIPDVNNVVQSGL 223
+ + D++ ++D S S I + + Q L
Sbjct: 2 SHMASRQEQDIVFLIDGSGS-----------ISSRNFATMMNFVRAVISQFQRPSTQFSL 50
Query: 224 VTFSNKIEEFFLLEWGV--SHLQRKIKYLSKFGVSTNSTPGLKYAYNQIFDMQGMRQHCN 281
+ FSNK + F E S+ + + + T + ++ +++F +
Sbjct: 51 MQFSNKFQTHFTFEEFRRSSNPLSLLASVHQLQGFTYTATAIQNVVHRLFHASYGARR-- 108
Query: 282 TEDANYKKIIVFMTDGENLSTKEDQQSLYYCNEAKKRGAIVYAIGIRVI----RSHEFLR 337
+ KI++ +TDG+ + A G I YAIG+ + S + L
Sbjct: 109 ----DAAKILIVITDGKKEG--DSLDYKDVIPMADAAGIIRYAIGVGLAFQNRNSWKELN 162
Query: 338 ACASP---NSFYLVENPHSMYDAFSHIGKDI 365
AS + VE+ ++ D + + + I
Sbjct: 163 DIASKPSQEHIFKVEDFDALKDIQNQLKEKI 193