HHsearch alignment for GI: 254780936 and conserved domain: pfam04396
>pfam04396 consensus.
Probab=98.59 E-value=1.7e-06 Score=61.03 Aligned_cols=130 Identities=18% Similarity=0.221 Sum_probs=83.7
Q ss_pred CEEEEEEEHHHHHHHHHHCCCCCCHHHH----HHHHHHCC--EEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEE
Q ss_conf 7189998078999999850876798999----99985179--29999997306887314677757999889755956975
Q gi|254780936|r 6 EKIALFIDGANLYASSKALGFDIDYRKL----LKAFRSRA--IVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVA 79 (182)
Q Consensus 6 ~rvaIfID~~Nl~~~~~~~~~~~d~~~L----~~~l~~~~--~l~~~~~y~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~ 79 (182)
T Consensus 1 akv~VfWDiEnCpvP~-----g~~~~~V~~~I~~al~~~Gy~g~vsi~aygd~~~~~-------~~~~~~L~stGI~l~h 68 (149)
T pfam04396 1 AKTSVFWDIEDCPVPD-----GLDARDVAPNIKSALRKLGYRGPVSITAYGDLNKIP-------REILRALSSTGISLAH 68 (149)
T ss_pred CCEEEEECCCCCCCCC-----CCCHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCC-------HHHHHHHHHCCCEEEE
T ss_conf 9548996243688999-----989999999999999974999866999987468698-------8999999976986885
Q ss_pred EEEEEECCCCCCCCCCCCCHHHHHHHHHHHH---CCCCEEEEECCC-HHHHHHHHHH-HHCCCEEEEEEEECCCCCCCHH
Q ss_conf 3458953788865435653299999999942---115889998386-6589999999-9849889999831577654708
Q gi|254780936|r 80 KVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGD-GCFTTLVAAL-QRKVKKVTIVSTVLSDPSMASD 154 (182)
Q Consensus 80 ~~~~~~~~~~~~~~~kk~~Dv~laiD~~~~a---~~~d~~iLvSGD-~Df~pli~~l-r~~Gk~V~v~~~~~~~~~~~S~ 154 (182)
T Consensus 69 vp----------~g~k~aad~~m~~d~~~~a~~np~Pati~LISgd~~dfa~~l~~L~~~r~Y~vlLa~p----~~a~~~ 134 (149)
T pfam04396 69 VP----------AGAKDARDKKMLVDILLWALDNPPPANLMLISGDDRDFASALHDLLRKRGYNILLAQP----EKASSS 134 (149)
T ss_pred CC----------CCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHCCCCEEEEECC----CCCCHH
T ss_conf 78----------8775347889999999999709997079999577076799999998712855999748----978789
Q ss_pred HHHHHCC
Q ss_conf 9998521
Q gi|254780936|r 155 QLRRQAD 161 (182)
Q Consensus 155 ~L~~~ad 161 (182)
T Consensus 135 ~l~~a~~ 141 (149)
T pfam04396 135 PALLAAA 141 (149)
T ss_pred HHHHHHH
T ss_conf 9998763