HHsearch results for GI: 254780936 and protein with PDBid: 2qip_A
>2qip_A Protein of unknown function VPA0982; APC85975, structural genomics, PSI-2, protein structure initiative; 1.48A {Vibrio parahaemolyticus rimd 2210633}
Probab=100.00 E-value=8.4e-33 Score=224.25 Aligned_cols=153 Identities=29% Similarity=0.456 Sum_probs=134.1
Q ss_pred CCCCEEEEEEEHHHHHHHHHH-CCCCCCHHHHHHHHHHCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf 788718999807899999985-0876798999999851792999999730688731467775799988975595697534
Q gi|254780936|r 3 DPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKV 81 (182)
Q Consensus 3 ~~~~rvaIfID~~Nl~~~~~~-~~~~~d~~~L~~~l~~~~~l~~~~~y~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~ 81 (182)
++++||||||||+|+|++++. .++++||.+|++++.+.+++.++++|.+++.+... ..+.+.+...|++++.++
T Consensus 7 ~~~~rvaIfID~~Nl~~~~k~~~~~~~d~~~l~~~~~~~~~v~~~~~y~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 81 (165)
T 2qip_A 7 DHKEKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATQEKEVVSAKAYAIASNDPKQ-----RQFHHILRGVGFEVMLKP 81 (165)
T ss_dssp CCCEEEEEEEEHHHHHHHHHHHHSSCBCHHHHHHHHTTTEEEEEEEEEECCCCCHHH-----HHHHHHHHHHTCEEEECC
T ss_pred CCCCEEEEEEEHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEEEEECCCCCHHH-----HHHHHHHHHCCCEEEEEC
T ss_conf 887709999956768999987437776799999999638908999998236771655-----445789997693688634
Q ss_pred EEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHH-CCCEEEEEEEECCCCCCCHHHHHHHC
Q ss_conf 58953788865435653299999999942115889998386658999999998-49889999831577654708999852
Q gi|254780936|r 82 AKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQR-KVKKVTIVSTVLSDPSMASDQLRRQA 160 (182)
Q Consensus 82 ~~~~~~~~~~~~~kk~~Dv~laiD~~~~a~~~d~~iLvSGD~Df~pli~~lr~-~Gk~V~v~~~~~~~~~~~S~~L~~~a 160 (182)
...+.++ ..++++|+.|++|+|.+++++|++|||||||||+|++++||+ .|++|+++++ ++.+|.+|+++|
T Consensus 82 ~~~~~~~----~~~~~~Dv~l~id~~~~~~~~d~~vLvSgDsDf~p~v~~lr~~~gk~V~v~~~----~~~~s~~L~~~a 153 (165)
T 2qip_A 82 YIQRRDG----SAKGDWDVGITLDAIEIAPDVDRVILVSGDGDFSLLVERIQQRYNKKVTVYGV----PRLTSQTLIDCA 153 (165)
T ss_dssp CCCCSSC----CCSCCCHHHHHHHHHHHGGGCSEEEEECCCGGGHHHHHHHHHHHCCEEEEEEC----GGGSCHHHHHHS
T ss_pred CEECCCC----CCCCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEEC----CCCCCHHHHHHC
T ss_conf 4651678----78861179999999962776898999957762899999999858978999978----998839999869
Q ss_pred CCCEEHHH
Q ss_conf 11151899
Q gi|254780936|r 161 DYFMDLAY 168 (182)
Q Consensus 161 d~fi~l~~ 168 (182)
|+|++|++
T Consensus 154 d~fi~id~ 161 (165)
T 2qip_A 154 DNFVAIDD 161 (165)
T ss_dssp SEEEECSG
T ss_pred CEEEECCC
T ss_conf 98899173