HHSEARCH alignment of GI: 254780936 and SCOP domain: d1xo1a2

Alignment

Probab=96.22  E-value=0.019  Score=32.95  Aligned_cols=42  Identities=26%  Similarity=0.200  Sum_probs=28.0

Q ss_pred             CCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEE
Q ss_conf             653299999999942115889998386658999999998498899998
Q gi|254780936|r   96 SSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS  143 (182)
Q Consensus        96 k~~Dv~laiD~~~~a~~~d~~iLvSGD~Df~pli~~lr~~Gk~V~v~~  143 (182)
                      -.+|=-|+.=+-.....-+.++|+|||.||..|+.      .+|.++.
T Consensus       109 ~EADDiIa~l~~~~~~~~~~v~IvS~DkD~~QLv~------~~v~~~~  150 (167)
T d1xo1a2         109 VEADDMAAYIVKLIGHLYDHVWLISTDGDWDTLLT------DKVSRFS  150 (167)
T ss_dssp             BCHHHHHHHHHHHHGGGSSCEEEECSCGGGGGGCB------TTEEEEC
T ss_pred             CCCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHEE------CCEEEEE
T ss_conf             04366999999986338987999717865888400------9879995

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: PIN domain-like
superfamily: PIN domain-like
family: 5' to 3' exonuclease catalytic domain
domain: T5 5'-exonuclease
species: Bacteriophage T5 [TaxId: 10726]