BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780936|ref|YP_003065349.1| hypothetical protein
CLIBASIA_04175 [Candidatus Liberibacter asiaticus str. psy62]
(182 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254780936|ref|YP_003065349.1| hypothetical protein CLIBASIA_04175 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040613|gb|ACT57409.1| hypothetical protein CLIBASIA_04175 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 182
Score = 376 bits (966), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/182 (100%), Positives = 182/182 (100%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF
Sbjct: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS
Sbjct: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED
Sbjct: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
Query: 181 KK 182
KK
Sbjct: 181 KK 182
>gi|315122349|ref|YP_004062838.1| hypothetical protein CKC_03005 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495751|gb|ADR52350.1| hypothetical protein CKC_03005 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 205
Score = 318 bits (816), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 150/179 (83%), Positives = 169/179 (94%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFDPREKIALFIDGANLYA+SKALGFDIDYRKLLKAF++RA V+RAYYYTTV+GD +QQ+
Sbjct: 1 MFDPREKIALFIDGANLYAASKALGFDIDYRKLLKAFKARARVLRAYYYTTVLGDSDQQY 60
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SPLHPLLDWLHYNGF+VV+KVAKEFTE+CGRK++K+SMDVELAVDAFEQSEG++HLVIFS
Sbjct: 61 SPLHPLLDWLHYNGFKVVSKVAKEFTESCGRKKIKASMDVELAVDAFEQSEGIDHLVIFS 120
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F TLV ALQRK KKVTIVSTVLS+PSM SDQLRRQAD+F+DLAYLKNEI R+ E
Sbjct: 121 GDGDFATLVEALQRKSKKVTIVSTVLSNPSMVSDQLRRQADHFIDLAYLKNEIQRESCE 179
>gi|15964816|ref|NP_385169.1| hypothetical protein SMc02407 [Sinorhizobium meliloti 1021]
gi|307300886|ref|ZP_07580655.1| protein of unknown function DUF88 [Sinorhizobium meliloti BL225C]
gi|307320703|ref|ZP_07600115.1| protein of unknown function DUF88 [Sinorhizobium meliloti AK83]
gi|15073995|emb|CAC45642.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
gi|306893630|gb|EFN24404.1| protein of unknown function DUF88 [Sinorhizobium meliloti AK83]
gi|306903841|gb|EFN34427.1| protein of unknown function DUF88 [Sinorhizobium meliloti BL225C]
Length = 192
Score = 255 bits (651), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 151/179 (84%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++
Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS
Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSLGRRKIKGNMDIELAIDAMEQSESVDHLVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG FTTLV ALQRK +KV++VST+ + P M +D LRRQAD+F+DLA L+ EI R+P E
Sbjct: 119 GDGDFTTLVEALQRKGRKVSVVSTMSTQPPMIADDLRRQADHFIDLATLRGEIGREPSE 177
>gi|51102762|gb|AAT95984.1| RtsE [Sinorhizobium meliloti]
Length = 191
Score = 254 bits (650), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 151/179 (84%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++
Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS
Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSLGRRKIKGNMDIELAIDAMEQSESVDHLVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG FTTLV ALQRK +KV++VST+ + P M +D LRRQAD+F+DLA L+ EI R+P E
Sbjct: 119 GDGDFTTLVEALQRKGRKVSVVSTMSTQPPMIADDLRRQADHFIDLATLRGEIGREPSE 177
>gi|227821396|ref|YP_002825366.1| hypothetical protein NGR_c08220 [Sinorhizobium fredii NGR234]
gi|227340395|gb|ACP24613.1| hypothetical protein NGR_c08220 [Sinorhizobium fredii NGR234]
Length = 192
Score = 254 bits (650), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 151/179 (84%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++
Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS
Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSLGRRKIKGNMDIELAIDAMEQSETVDHLVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG FTTLV ALQRK +KV++VST+ + P M +D LRRQAD+F+DLA L+ EI R+P E
Sbjct: 119 GDGDFTTLVEALQRKGRKVSVVSTMSTQPPMIADDLRRQADHFIDLATLRGEIGREPSE 177
>gi|222148076|ref|YP_002549033.1| hypothetical protein Avi_1440 [Agrobacterium vitis S4]
gi|221735064|gb|ACM36027.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 192
Score = 254 bits (650), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 150/179 (83%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++
Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++V+ K AKEFT++ GR++VK +MD+ELA+DA EQSE ++HLVIFS
Sbjct: 59 SSIRPLIDWLDYNGYKVITKPAKEFTDSMGRRKVKGNMDIELAIDAMEQSETVDHLVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG FTTLV ALQRK +KV++VST+ + P M +D LRRQAD+F+DL LK EI RDP E
Sbjct: 119 GDGDFTTLVEALQRKGRKVSVVSTMSTQPPMIADDLRRQADHFIDLVSLKAEIGRDPSE 177
>gi|150395899|ref|YP_001326366.1| hypothetical protein Smed_0675 [Sinorhizobium medicae WSM419]
gi|150027414|gb|ABR59531.1| protein of unknown function DUF88 [Sinorhizobium medicae WSM419]
Length = 193
Score = 254 bits (650), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 151/179 (84%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++
Sbjct: 2 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 59
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS
Sbjct: 60 SSIRPLIDWLDYNGYKVVTKPAKEFTDSLGRRKIKGNMDIELAIDAMEQSESVDHLVIFS 119
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG FTTLV ALQRK +KV++VST+ + P M +D LRRQAD+F+DLA L+ EI R+P E
Sbjct: 120 GDGDFTTLVEALQRKGRKVSVVSTMATQPPMIADDLRRQADHFIDLASLRAEIGREPSE 178
>gi|159184584|ref|NP_354050.2| hypothetical protein Atu1028 [Agrobacterium tumefaciens str. C58]
gi|159139886|gb|AAK86835.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 189
Score = 253 bits (647), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 150/179 (83%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++
Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K AKEFT+ GR+++K +MD+ELAVDA EQSE ++HLV+FS
Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDALGRRKIKGNMDIELAVDAMEQSETVDHLVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG FTTLV ALQRK +KV++VST+ + P+M +D LRRQAD+F+DL LK EI RDP E
Sbjct: 119 GDGDFTTLVDALQRKGRKVSVVSTMATQPAMIADDLRRQADHFIDLMTLKAEIGRDPSE 177
>gi|325292407|ref|YP_004278271.1| hypothetical protein AGROH133_05017 [Agrobacterium sp. H13-3]
gi|325060260|gb|ADY63951.1| hypothetical protein AGROH133_05017 [Agrobacterium sp. H13-3]
Length = 189
Score = 252 bits (644), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 150/179 (83%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++
Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K AKEFT+ GR+++K +MD+ELAVDA EQSE ++HLV+FS
Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDALGRRKIKGNMDIELAVDAMEQSETVDHLVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG FT LV ALQRK +KV++VST+ + P+M +D LRRQAD+F+DL LK EI RDP+E
Sbjct: 119 GDGDFTKLVDALQRKGRKVSVVSTMATQPAMIADDLRRQADHFIDLMTLKAEIGRDPNE 177
>gi|227819053|ref|YP_002823024.1| hypothetical protein NGR_b08150 [Sinorhizobium fredii NGR234]
gi|227338052|gb|ACP22271.1| conserved hypothetical protein [Sinorhizobium fredii NGR234]
Length = 194
Score = 252 bits (643), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 149/179 (83%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFDPREKIALFIDGANL+A+SK LGFDIDYRKLL+AFRSRA ++RAYYYT ++ D E F
Sbjct: 1 MFDPREKIALFIDGANLFATSKTLGFDIDYRKLLEAFRSRAYLLRAYYYTALIEDLE--F 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG+ VV K AKEFT++ GR+++K SMD+ELA+DA E S+ ++H VIFS
Sbjct: 59 SSIRPLIDWLDYNGYTVVTKPAKEFTDSQGRRKIKGSMDIELAIDAMEHSQTVDHFVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG FT LV ALQRK +KV++VST+L+ P M +DQLRRQAD+F+DLA L++EI R P E
Sbjct: 119 GDGDFTPLVEALQRKGRKVSVVSTILTQPPMIADQLRRQADHFIDLATLRSEIGRHPRE 177
>gi|222085384|ref|YP_002543914.1| hypothetical protein Arad_1584 [Agrobacterium radiobacter K84]
gi|221722832|gb|ACM25988.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 194
Score = 251 bits (642), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 150/179 (83%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++
Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS
Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSMGRRKIKGNMDIELAIDAMEQSETVDHLVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG FTTLV ALQR+ +KV+++ST+ + P M +D LRRQAD+F+DL LK EI RDP +
Sbjct: 119 GDGDFTTLVEALQRRGRKVSVISTMATQPPMIADDLRRQADHFIDLVSLKAEIGRDPSD 177
>gi|116251270|ref|YP_767108.1| hypothetical protein RL1504 [Rhizobium leguminosarum bv. viciae
3841]
gi|115255918|emb|CAK06999.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 193
Score = 251 bits (641), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 149/179 (83%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++
Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS
Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSMGRRKIKGNMDIELAIDAMEQSETVDHLVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG FT LV ALQR+ +KV+++ST+ + P M +D LRRQAD+F+DL LK EI RDP E
Sbjct: 119 GDGDFTNLVEALQRRGRKVSVISTMATQPPMIADDLRRQADHFIDLLSLKAEIGRDPSE 177
>gi|241203882|ref|YP_002974978.1| hypothetical protein Rleg_1144 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240857772|gb|ACS55439.1| protein of unknown function DUF88 [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 193
Score = 251 bits (641), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 149/179 (83%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++
Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS
Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSMGRRKIKGNMDIELAIDAMEQSETVDHLVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG FT LV ALQR+ +KV+++ST+ + P M +D LRRQAD+F+DL LK EI RDP E
Sbjct: 119 GDGDFTNLVEALQRRGRKVSVISTMATQPPMIADDLRRQADHFIDLLSLKAEIGRDPSE 177
>gi|190891066|ref|YP_001977608.1| hypothetical protein RHECIAT_CH0001451 [Rhizobium etli CIAT 652]
gi|218508406|ref|ZP_03506284.1| hypothetical protein RetlB5_12894 [Rhizobium etli Brasil 5]
gi|190696345|gb|ACE90430.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
gi|327191317|gb|EGE58350.1| hypothetical protein RHECNPAF_32006 [Rhizobium etli CNPAF512]
Length = 193
Score = 251 bits (640), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 149/179 (83%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++
Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS
Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSMGRRKIKGNMDIELAIDAMEQSETVDHLVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG FT LV ALQR+ +KV+++ST+ + P M +D LRRQAD+F+DL LK EI RDP E
Sbjct: 119 GDGDFTNLVEALQRRGRKVSVISTMATQPPMIADDLRRQADHFIDLLSLKAEIGRDPSE 177
>gi|218678619|ref|ZP_03526516.1| hypothetical protein RetlC8_06939 [Rhizobium etli CIAT 894]
Length = 193
Score = 250 bits (639), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 149/179 (83%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++
Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS
Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSMGRRKIKGNMDIELAIDAMEQSETVDHLVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG FT LV ALQR+ +KV+++ST+ + P M +D LRRQAD+F+DL LK EI RDP E
Sbjct: 119 GDGDFTNLVEALQRRGRKVSVISTMATQPPMIADDLRRQADHFIDLLSLKAEIGRDPAE 177
>gi|86357021|ref|YP_468913.1| hypothetical protein RHE_CH01383 [Rhizobium etli CFN 42]
gi|86281123|gb|ABC90186.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 193
Score = 250 bits (639), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 149/179 (83%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++
Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS
Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSMGRRKIKGNMDIELAIDAMEQSETVDHLVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG FT LV ALQR+ +KV+++ST+ + P M +D LRRQAD+F+DL LK EI RDP E
Sbjct: 119 GDGDFTNLVEALQRRGRKVSVISTMATQPPMIADDLRRQADHFIDLLSLKAEIGRDPAE 177
>gi|209548594|ref|YP_002280511.1| hypothetical protein Rleg2_0991 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209534350|gb|ACI54285.1| protein of unknown function DUF88 [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 195
Score = 250 bits (638), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 149/179 (83%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++
Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS
Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSMGRRKIKGNMDIELAIDAMEQSETVDHLVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG FT LV ALQR+ +KV+++ST+ + P M +D LRRQAD+F+DL LK EI RDP E
Sbjct: 119 GDGDFTNLVEALQRRGRKVSVISTMSTQPPMIADDLRRQADHFIDLLSLKAEIGRDPAE 177
>gi|163760601|ref|ZP_02167682.1| hypothetical protein HPDFL43_11921 [Hoeflea phototrophica DFL-43]
gi|162282216|gb|EDQ32506.1| hypothetical protein HPDFL43_11921 [Hoeflea phototrophica DFL-43]
Length = 196
Score = 247 bits (630), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 115/179 (64%), Positives = 150/179 (83%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFDPREKIALFIDGANLYA+SK+L FDIDYRKLLK+F+ R ++RAYYYT ++ D Q++
Sbjct: 1 MFDPREKIALFIDGANLYAASKSLNFDIDYRKLLKSFQGRGYLLRAYYYTALIED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+ELA+DA EQ+E ++HLVIFS
Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSMGRRKVKGNMDIELAIDAMEQAEVVDHLVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG FT+LV ALQRK +KVT+VS++ + P M +D LRRQADYF+DL+ LK+EI R+ E
Sbjct: 119 GDGDFTSLVEALQRKGRKVTVVSSLSTQPPMIADDLRRQADYFLDLSTLKSEIGRESSE 177
>gi|13476434|ref|NP_108004.1| hypothetical protein mll7752 [Mesorhizobium loti MAFF303099]
gi|319784512|ref|YP_004143988.1| hypothetical protein Mesci_4829 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|14027195|dbj|BAB54149.1| mll7752 [Mesorhizobium loti MAFF303099]
gi|317170400|gb|ADV13938.1| hypothetical protein Mesci_4829 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 193
Score = 246 bits (629), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 146/179 (81%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFDPREKIALFIDGANLYA+S+ALGFDIDYRKLL +F+ R ++RAYYYT +V D Q++
Sbjct: 1 MFDPREKIALFIDGANLYATSRALGFDIDYRKLLSSFQKRGYLLRAYYYTALVED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNGF+VV K AKEFT++ GR+++K +MD+EL VDA E ++ ++H VIFS
Sbjct: 59 SSIRPLIDWLDYNGFKVVTKPAKEFTDSTGRRKIKGNMDIELTVDALELADVVDHYVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F TLV ALQR+ +KV+IVST+ S P M SD LRRQAD+F+DL LKNE+ RDP E
Sbjct: 119 GDGDFRTLVEALQRRGRKVSIVSTMASQPPMISDDLRRQADHFIDLTTLKNEVGRDPSE 177
>gi|260462331|ref|ZP_05810539.1| protein of unknown function DUF88 [Mesorhizobium opportunistum
WSM2075]
gi|259031825|gb|EEW33093.1| protein of unknown function DUF88 [Mesorhizobium opportunistum
WSM2075]
Length = 193
Score = 246 bits (628), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 116/179 (64%), Positives = 146/179 (81%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFDPREKIALFIDGANLYA+S+ALGFDIDYRKLL +F+ R ++RAYYYT +V D Q++
Sbjct: 1 MFDPREKIALFIDGANLYATSRALGFDIDYRKLLSSFQKRGYLLRAYYYTALVED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNGF+VV K AKEFT++ GR+++K +MD+EL VDA E ++ ++H VIFS
Sbjct: 59 SSIRPLIDWLDYNGFKVVTKPAKEFTDSTGRRKIKGNMDIELTVDALELADVVDHYVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F TLV ALQR+ +KV+IVST+ S P M SD LRRQAD+F+DL LKNE+ RDP E
Sbjct: 119 GDGDFRTLVEALQRRGRKVSIVSTMASQPPMISDDLRRQADHFIDLVTLKNEVGRDPSE 177
>gi|256060778|ref|ZP_05450940.1| hypothetical protein Bneo5_10505 [Brucella neotomae 5K33]
gi|256369087|ref|YP_003106595.1| hypothetical protein BMI_I648 [Brucella microti CCM 4915]
gi|261324768|ref|ZP_05963965.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|306842086|ref|ZP_07474758.1| cytoplasmic protein [Brucella sp. BO2]
gi|306845250|ref|ZP_07477826.1| cytoplasmic protein [Brucella sp. BO1]
gi|255999247|gb|ACU47646.1| hypothetical protein BMI_I648 [Brucella microti CCM 4915]
gi|261300748|gb|EEY04245.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|306274409|gb|EFM56216.1| cytoplasmic protein [Brucella sp. BO1]
gi|306287836|gb|EFM59259.1| cytoplasmic protein [Brucella sp. BO2]
Length = 191
Score = 244 bits (622), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 146/179 (81%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFD REKIALFIDGANLYA+SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++
Sbjct: 1 MFDSREKIALFIDGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS
Sbjct: 59 SSIRPLIDWLDYNGYKVVTKAAKEFTDSTGRRKVKGNMDIELTVDAMQLTDTVDHFVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E
Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSE 177
>gi|62289609|ref|YP_221402.1| hypothetical protein BruAb1_0666 [Brucella abortus bv. 1 str.
9-941]
gi|82699537|ref|YP_414111.1| hypothetical protein BAB1_0669 [Brucella melitensis biovar Abortus
2308]
gi|189023863|ref|YP_001934631.1| hypothetical protein BAbS19_I06260 [Brucella abortus S19]
gi|237815104|ref|ZP_04594102.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|254688926|ref|ZP_05152180.1| hypothetical protein Babob68_01821 [Brucella abortus bv. 6 str.
870]
gi|254693408|ref|ZP_05155236.1| hypothetical protein Babob3T_01839 [Brucella abortus bv. 3 str.
Tulya]
gi|254697060|ref|ZP_05158888.1| hypothetical protein Babob28_04920 [Brucella abortus bv. 2 str.
86/8/59]
gi|254729957|ref|ZP_05188535.1| hypothetical protein Babob42_01839 [Brucella abortus bv. 4 str.
292]
gi|256257174|ref|ZP_05462710.1| hypothetical protein Babob9C_07408 [Brucella abortus bv. 9 str.
C68]
gi|260545634|ref|ZP_05821375.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260754412|ref|ZP_05866760.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260757631|ref|ZP_05869979.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260761458|ref|ZP_05873801.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260883440|ref|ZP_05895054.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|261213658|ref|ZP_05927939.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|297248021|ref|ZP_06931739.1| conserved hypothetical protein [Brucella abortus bv. 5 str. B3196]
gi|62195741|gb|AAX74041.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82615638|emb|CAJ10625.1| Protein of unknown function DUF88 [Brucella melitensis biovar
Abortus 2308]
gi|189019435|gb|ACD72157.1| Protein of unknown function DUF88 [Brucella abortus S19]
gi|237789941|gb|EEP64151.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|260097041|gb|EEW80916.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260667949|gb|EEX54889.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260671890|gb|EEX58711.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260674520|gb|EEX61341.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260872968|gb|EEX80037.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|260915265|gb|EEX82126.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|297175190|gb|EFH34537.1| conserved hypothetical protein [Brucella abortus bv. 5 str. B3196]
Length = 191
Score = 243 bits (619), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 113/179 (63%), Positives = 146/179 (81%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFD REKIALFIDGANLYA+SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++
Sbjct: 1 MFDSREKIALFIDGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K A+EFT++ GR++VK +MD+EL VDA + ++ ++H VIFS
Sbjct: 59 SSIRPLIDWLDYNGYKVVTKAAREFTDSTGRRKVKGNMDIELTVDAMQLTDTVDHFVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E
Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSE 177
>gi|254713779|ref|ZP_05175590.1| hypothetical protein BcetM6_10570 [Brucella ceti M644/93/1]
gi|254717164|ref|ZP_05178975.1| hypothetical protein BcetM_12234 [Brucella ceti M13/05/1]
gi|261218981|ref|ZP_05933262.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261321520|ref|ZP_05960717.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|260924070|gb|EEX90638.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261294210|gb|EEX97706.1| conserved hypothetical protein [Brucella ceti M644/93/1]
Length = 191
Score = 242 bits (618), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 114/179 (63%), Positives = 146/179 (81%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFD REKIALFIDGANLYA+SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++
Sbjct: 1 MFDSREKIALFIDGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS
Sbjct: 59 SSIRPLIDWLDYNGYKVVTKAAKEFTDSTGRRKVKGNMDIELTVDAKQLTDTVDHFVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E
Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSE 177
>gi|254718792|ref|ZP_05180603.1| hypothetical protein Bru83_04498 [Brucella sp. 83/13]
gi|265983772|ref|ZP_06096507.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306837511|ref|ZP_07470386.1| cytoplasmic protein [Brucella sp. NF 2653]
gi|264662364|gb|EEZ32625.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306407403|gb|EFM63607.1| cytoplasmic protein [Brucella sp. NF 2653]
Length = 202
Score = 242 bits (618), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 113/179 (63%), Positives = 145/179 (81%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFD REKI LFIDGANLYA+SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++
Sbjct: 1 MFDSREKIVLFIDGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS
Sbjct: 59 SSIRPLIDWLDYNGYKVVTKAAKEFTDSTGRRKVKGNMDIELTVDAMQLTDTVDHFVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E
Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSE 177
>gi|23501536|ref|NP_697663.1| hypothetical protein BR0649 [Brucella suis 1330]
gi|161618620|ref|YP_001592507.1| hypothetical protein BCAN_A0662 [Brucella canis ATCC 23365]
gi|163842921|ref|YP_001627325.1| hypothetical protein BSUIS_A0677 [Brucella suis ATCC 23445]
gi|254703984|ref|ZP_05165812.1| hypothetical protein Bsuib36_08664 [Brucella suis bv. 3 str. 686]
gi|260566769|ref|ZP_05837239.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|261754636|ref|ZP_05998345.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|23347446|gb|AAN29578.1| conserved hypothetical protein [Brucella suis 1330]
gi|161335431|gb|ABX61736.1| Hypothetical protein BCAN_A0662 [Brucella canis ATCC 23365]
gi|163673644|gb|ABY37755.1| Hypothetical protein BSUIS_A0677 [Brucella suis ATCC 23445]
gi|260156287|gb|EEW91367.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|261744389|gb|EEY32315.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
Length = 191
Score = 242 bits (618), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 113/179 (63%), Positives = 146/179 (81%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFD REKIALFI+GANLYA+SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++
Sbjct: 1 MFDSREKIALFINGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS
Sbjct: 59 SSIRPLIDWLDYNGYKVVTKAAKEFTDSTGRRKVKGNMDIELTVDAMQLTDTVDHFVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E
Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSE 177
>gi|153009965|ref|YP_001371180.1| hypothetical protein Oant_2638 [Ochrobactrum anthropi ATCC 49188]
gi|151561853|gb|ABS15351.1| protein of unknown function DUF88 [Ochrobactrum anthropi ATCC
49188]
Length = 191
Score = 242 bits (617), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 113/179 (63%), Positives = 145/179 (81%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFD REKIALFIDGANLYA+SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++
Sbjct: 1 MFDSREKIALFIDGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS
Sbjct: 59 SSIRPLIDWLDYNGYKVVTKAAKEFTDSTGRRKVKGNMDIELTVDAMQLTDTVDHFVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F +L ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E
Sbjct: 119 GDGDFRSLAEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSE 177
>gi|239831485|ref|ZP_04679814.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239823752|gb|EEQ95320.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 191
Score = 242 bits (617), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 113/179 (63%), Positives = 145/179 (81%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFD REKIALFIDGANLYA+SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++
Sbjct: 1 MFDSREKIALFIDGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS
Sbjct: 59 SSIRPLIDWLDYNGYKVVTKAAKEFTDSTGRRKVKGNMDIELTVDAMQLTDTVDHFVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F +L ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E
Sbjct: 119 GDGDFRSLAEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSE 177
>gi|307322278|ref|ZP_07601643.1| protein of unknown function DUF88 [Sinorhizobium meliloti AK83]
gi|306892060|gb|EFN22881.1| protein of unknown function DUF88 [Sinorhizobium meliloti AK83]
Length = 196
Score = 241 bits (615), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 115/177 (64%), Positives = 146/177 (82%), Gaps = 2/177 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFDPREKIALFIDGANL+A+SK+LGFDIDY KLL+AFR+RA ++RAYYYT ++ D E F
Sbjct: 1 MFDPREKIALFIDGANLFAASKSLGFDIDYCKLLQAFRNRAYLLRAYYYTAIIEDLE--F 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG+ VV K AKEFT+ GR+++K +MD+ELA+DA EQS +HLVIFS
Sbjct: 59 SSIRPLIDWLDYNGYTVVTKPAKEFTDAQGRRKIKGNMDIELAIDAMEQSRTADHLVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
GDG FTTLV LQRK +KV++VST+ + P M +D+LRRQAD+F+DLA L++EI R P
Sbjct: 119 GDGDFTTLVETLQRKGRKVSVVSTMSTQPPMIADELRRQADHFIDLASLRSEIDRHP 175
>gi|307313917|ref|ZP_07593532.1| protein of unknown function DUF88 [Sinorhizobium meliloti BL225C]
gi|306899191|gb|EFN29829.1| protein of unknown function DUF88 [Sinorhizobium meliloti BL225C]
Length = 196
Score = 241 bits (615), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 115/177 (64%), Positives = 146/177 (82%), Gaps = 2/177 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFDPREKIALFIDGANL+A+SK+LGFDIDY KLL+AFR+RA ++RAYYYT ++ D E F
Sbjct: 1 MFDPREKIALFIDGANLFAASKSLGFDIDYCKLLEAFRNRAYLLRAYYYTAIIEDLE--F 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG+ VV K AKEFT+ GR+++K +MD+ELA+DA EQS +HLVIFS
Sbjct: 59 SSIRPLIDWLDYNGYTVVTKPAKEFTDAQGRRKIKGNMDIELAIDAMEQSRTADHLVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
GDG FTTLV LQRK +KV++VST+ + P M +D+LRRQAD+F+DLA L++EI R P
Sbjct: 119 GDGDFTTLVETLQRKGRKVSVVSTMSTQPPMIADELRRQADHFIDLASLRSEIDRHP 175
>gi|227820632|ref|YP_002824602.1| hypothetical protein NGR_c00450 [Sinorhizobium fredii NGR234]
gi|227339631|gb|ACP23849.1| conserved hypothetical protein [Sinorhizobium fredii NGR234]
Length = 191
Score = 241 bits (614), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 115/177 (64%), Positives = 144/177 (81%), Gaps = 2/177 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFD REKIALFIDGANLYA+SK+LGFDIDYRKLL AF+ RA ++RAYYYT ++ D E F
Sbjct: 1 MFDSREKIALFIDGANLYATSKSLGFDIDYRKLLSAFQKRAYLVRAYYYTALIEDLE--F 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG+ VV K AKEFT+ GR+++K SMDVELA+DA EQ + ++H V+FS
Sbjct: 59 SSIRPLIDWLDYNGYTVVTKPAKEFTDALGRRKIKGSMDVELAIDALEQRQVVDHYVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
GDG FTTLVAALQR +KVT+VST+ + P M +D+LRRQAD+F+DL L++EI R P
Sbjct: 119 GDGNFTTLVAALQRNGRKVTVVSTLSTQPPMIADELRRQADHFIDLIALRSEIDRHP 175
>gi|254701438|ref|ZP_05163266.1| hypothetical protein Bsuib55_11349 [Brucella suis bv. 5 str. 513]
gi|261751977|ref|ZP_05995686.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261741730|gb|EEY29656.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
Length = 191
Score = 239 bits (611), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 112/179 (62%), Positives = 145/179 (81%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFD REKIALFI+GANLY +SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++
Sbjct: 1 MFDSREKIALFINGANLYTASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS
Sbjct: 59 SSIRPLIDWLDYNGYKVVTKAAKEFTDSTGRRKVKGNMDLELTVDAMQLTDTVDHFVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E
Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSE 177
>gi|225627151|ref|ZP_03785189.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|254707641|ref|ZP_05169469.1| hypothetical protein BpinM_11896 [Brucella pinnipedialis
M163/99/10]
gi|254709777|ref|ZP_05171588.1| hypothetical protein BpinB_05796 [Brucella pinnipedialis B2/94]
gi|256031267|ref|ZP_05444881.1| hypothetical protein BpinM2_11548 [Brucella pinnipedialis
M292/94/1]
gi|260168403|ref|ZP_05755214.1| hypothetical protein BruF5_08553 [Brucella sp. F5/99]
gi|261315135|ref|ZP_05954332.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261317309|ref|ZP_05956506.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261757864|ref|ZP_06001573.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|265988348|ref|ZP_06100905.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|225617986|gb|EEH15030.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|261296532|gb|EEY00029.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261304161|gb|EEY07658.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261737848|gb|EEY25844.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|264660545|gb|EEZ30806.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
Length = 191
Score = 239 bits (611), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 113/179 (63%), Positives = 145/179 (81%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFD REKIALFIDGANLYA+SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++
Sbjct: 1 MFDSREKIALFIDGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++V K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS
Sbjct: 59 SSIRPLIDWLDYNGYKVGTKAAKEFTDSTGRRKVKGNMDIELTVDAKQLTDTVDHFVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E
Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSE 177
>gi|110633298|ref|YP_673506.1| hypothetical protein Meso_0944 [Mesorhizobium sp. BNC1]
gi|110284282|gb|ABG62341.1| protein of unknown function DUF88 [Chelativorans sp. BNC1]
Length = 194
Score = 239 bits (610), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 111/179 (62%), Positives = 146/179 (81%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFDPREKIA+FIDGANLYA+S++LGFDIDYRKLL +F+ RA ++RAYYYT +V D Q++
Sbjct: 1 MFDPREKIAMFIDGANLYATSRSLGFDIDYRKLLASFQKRAYLLRAYYYTALVED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+EL +DA + ++H VIFS
Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSTGRRKIKGNMDIELTIDALGLVDVVDHYVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F TLV ALQR+ +KV+IVST+ S P M SD+LRRQAD+F+DLA L+ E+ RDP E
Sbjct: 119 GDGDFRTLVEALQRRGRKVSIVSTIQSQPPMISDELRRQADHFIDLATLQTEVGRDPSE 177
>gi|17987581|ref|NP_540215.1| putative cytoplasmic protein [Brucella melitensis bv. 1 str. 16M]
gi|225852170|ref|YP_002732403.1| hypothetical protein BMEA_A0686 [Brucella melitensis ATCC 23457]
gi|256044347|ref|ZP_05447251.1| hypothetical protein Bmelb1R_07603 [Brucella melitensis bv. 1 str.
Rev.1]
gi|256113190|ref|ZP_05454058.1| hypothetical protein Bmelb3E_10777 [Brucella melitensis bv. 3 str.
Ether]
gi|256264318|ref|ZP_05466850.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|260563699|ref|ZP_05834185.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|265990761|ref|ZP_06103318.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|265994597|ref|ZP_06107154.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|17983287|gb|AAL52479.1| hypothetical cytosolic protein [Brucella melitensis bv. 1 str. 16M]
gi|225640535|gb|ACO00449.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457]
gi|260153715|gb|EEW88807.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|262765710|gb|EEZ11499.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|263001545|gb|EEZ14120.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|263094592|gb|EEZ18390.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|326408671|gb|ADZ65736.1| putative cytoplasmic protein [Brucella melitensis M28]
gi|326538396|gb|ADZ86611.1| conserved hypothetical protein [Brucella melitensis M5-90]
Length = 191
Score = 239 bits (609), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 112/179 (62%), Positives = 145/179 (81%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFD REKIALFIDGANLYA+SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++
Sbjct: 1 MFDSREKIALFIDGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K A+EFT++ GR++VK +MD+EL VDA + ++ ++H VIFS
Sbjct: 59 SSIRPLIDWLDYNGYKVVTKAAREFTDSTGRRKVKGNMDIELTVDAMQLTDTVDHFVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
G G F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E
Sbjct: 119 GYGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSE 177
>gi|256159377|ref|ZP_05457159.1| hypothetical protein BcetM4_10523 [Brucella ceti M490/95/1]
gi|256254675|ref|ZP_05460211.1| hypothetical protein BcetB_10340 [Brucella ceti B1/94]
gi|261221851|ref|ZP_05936132.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|265997815|ref|ZP_06110372.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|260920435|gb|EEX87088.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|262552283|gb|EEZ08273.1| conserved hypothetical protein [Brucella ceti M490/95/1]
Length = 191
Score = 238 bits (606), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 112/179 (62%), Positives = 144/179 (80%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFD REKIALFIDGANLYA+SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++
Sbjct: 1 MFDSREKIALFIDGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + P +DWL YNG++V K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS
Sbjct: 59 SSIRPFIDWLDYNGYKVGTKAAKEFTDSTGRRKVKGNMDIELTVDAKQLTDTVDHFVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E
Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSE 177
>gi|294852014|ref|ZP_06792687.1| hypothetical protein BAZG_00929 [Brucella sp. NVSL 07-0026]
gi|294820603|gb|EFG37602.1| hypothetical protein BAZG_00929 [Brucella sp. NVSL 07-0026]
Length = 191
Score = 238 bits (606), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 112/179 (62%), Positives = 144/179 (80%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF REKIALFID ANLYA+SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++
Sbjct: 1 MFGSREKIALFIDDANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS
Sbjct: 59 SSIRPLIDWLDYNGYKVVTKAAKEFTDSTGRRKVKGNMDIELTVDAMQLTDTVDHFVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E
Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSE 177
>gi|90420856|ref|ZP_01228761.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90334831|gb|EAS48603.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 201
Score = 234 bits (596), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 110/177 (62%), Positives = 143/177 (80%), Gaps = 2/177 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFD REKIALFIDGANLYA+S+ LGFDIDY+K+L++F +R ++RAYYYT +V D E +
Sbjct: 1 MFDQREKIALFIDGANLYAASRGLGFDIDYKKMLRSFEARGYLLRAYYYTALVEDNE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K A+EFT+ GR+R+K +MD+ELAVDA E + ++H V+FS
Sbjct: 59 SSIRPLIDWLDYNGYRVVTKPAREFTDASGRRRIKGNMDIELAVDAMELVDTVDHFVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
GDG F +LVAALQRK +KV++VST+ S P M SD LRRQAD+F++LA LK EI RDP
Sbjct: 119 GDGDFRSLVAALQRKGRKVSVVSTLTSSPPMISDDLRRQADHFIELANLKAEIGRDP 175
>gi|254504996|ref|ZP_05117147.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
gi|222441067|gb|EEE47746.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
Length = 196
Score = 231 bits (588), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 105/179 (58%), Positives = 145/179 (81%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFD REK+ALFIDGANLY+++KA+GFDIDY++LLK F+ +A ++RAYYYT ++ D Q++
Sbjct: 1 MFDAREKVALFIDGANLYSTAKAIGFDIDYKRLLKEFQGQAYLLRAYYYTALIED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++V+ K KEF ++ GR++VK +MD+ELAVDA E E ++H+V+FS
Sbjct: 59 SSIRPLIDWLDYNGYKVITKPVKEFVDSAGRRKVKGNMDIELAVDAMELVESVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F +LV ALQRK +KV++VST+ + P M +D LRRQAD+F+DLA L N+I RDP E
Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLKTQPPMIADDLRRQADHFIDLASLANKIGRDPSE 177
>gi|307946592|ref|ZP_07661927.1| RtsE [Roseibium sp. TrichSKD4]
gi|307770256|gb|EFO29482.1| RtsE [Roseibium sp. TrichSKD4]
Length = 194
Score = 231 bits (588), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 104/179 (58%), Positives = 146/179 (81%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFD REK+ALFIDGANLY+++KA+GFDIDY++LLK F+ +A ++RAYYYT ++ D Q++
Sbjct: 1 MFDAREKVALFIDGANLYSTAKAIGFDIDYKRLLKEFQGQAYLLRAYYYTALIED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++V+ K KEF ++ GR++VK +MD+ELAVDA +Q E ++H+V+FS
Sbjct: 59 SSIRPLIDWLDYNGYKVITKPVKEFVDSTGRRKVKGNMDIELAVDAMQQVEHVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F +LV ALQR+ +KV++VST+ + P M +D LRRQAD+F+DLA L N+I RDP E
Sbjct: 119 GDGDFRSLVEALQRRGRKVSVVSTLKTQPPMIADDLRRQADHFIDLASLANKIGRDPSE 177
>gi|114706254|ref|ZP_01439156.1| hypothetical protein FP2506_00680 [Fulvimarina pelagi HTCC2506]
gi|114538115|gb|EAU41237.1| hypothetical protein FP2506_00680 [Fulvimarina pelagi HTCC2506]
Length = 199
Score = 229 bits (583), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 108/179 (60%), Positives = 141/179 (78%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFD REKIALFIDGANLYA+S+ LGFDIDY+K+L F +A ++RAYYYT ++ D Q++
Sbjct: 1 MFDQREKIALFIDGANLYAASRNLGFDIDYKKMLTFFEKKAYLLRAYYYTALIED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K AKEFT+ GR++VK +MD+ELA+DA E S+ ++H V+FS
Sbjct: 59 SSIRPLIDWLDYNGYRVVTKPAKEFTDQTGRRKVKGNMDIELAIDAMELSDTVDHFVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F +LV ALQRK +KV++VST+ + P M SD LRRQAD+F+DL LKNEI R E
Sbjct: 119 GDGDFRSLVDALQRKGRKVSVVSTLATQPPMISDDLRRQADHFIDLTSLKNEIGRSQAE 177
>gi|254469949|ref|ZP_05083354.1| DUF88 [Pseudovibrio sp. JE062]
gi|211961784|gb|EEA96979.1| DUF88 [Pseudovibrio sp. JE062]
Length = 194
Score = 226 bits (575), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 101/179 (56%), Positives = 145/179 (81%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFDPREKIALFIDGANLY+++KA+GFDIDY++LLK F+S+ ++RAYYYT +V EQ++
Sbjct: 1 MFDPREKIALFIDGANLYSTAKAIGFDIDYKRLLKEFQSKGYLLRAYYYTALV--EEQEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K KEF ++ GR+++K +MD+ELAVDA + + ++H+V+FS
Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPVKEFVDSAGRRKIKGNMDIELAVDAMQLIDHVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F +LV ALQR+ +KV++VST+ + P M +D LRRQAD+F++L+ L + RDP+E
Sbjct: 119 GDGDFRSLVEALQRRGRKVSVVSTLQTQPPMIADDLRRQADHFIELSTLMQRVGRDPNE 177
>gi|304392073|ref|ZP_07374015.1| hypothetical protein R2A130_0742 [Ahrensia sp. R2A130]
gi|303296302|gb|EFL90660.1| hypothetical protein R2A130_0742 [Ahrensia sp. R2A130]
Length = 199
Score = 224 bits (570), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 105/175 (60%), Positives = 139/175 (79%), Gaps = 2/175 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFD REKIAL IDGANLYA+S+ALGFDIDYR++L AF+ R V+RAYYYT +V D Q++
Sbjct: 1 MFDEREKIALMIDGANLYATSRALGFDIDYRQMLVAFQKRGYVLRAYYYTALVED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++V+ K AKEFT+ GR++VK +MD+ELAVDA + ++ ++H V+FS
Sbjct: 59 SAIRPLIDWLDYNGYRVITKPAKEFTDASGRRKVKGNMDIELAVDALDLADTVDHFVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
GDG F LV +LQRK ++VT+VST S P M +D+LRRQAD F+DL L++EI R
Sbjct: 119 GDGDFRALVESLQRKGRRVTVVSTTSSQPPMIADELRRQADVFIDLKSLQDEIGR 173
>gi|158422876|ref|YP_001524168.1| hypothetical protein AZC_1252 [Azorhizobium caulinodans ORS 571]
gi|158329765|dbj|BAF87250.1| uncharacterized conserved protein [Azorhizobium caulinodans ORS
571]
Length = 201
Score = 222 bits (565), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 104/174 (59%), Positives = 141/174 (81%), Gaps = 2/174 (1%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
EKIALFIDGANLY+++KALGFDIDY++LLK F+SR ++RA+YYTT+V D Q++S + P
Sbjct: 5 EKIALFIDGANLYSATKALGFDIDYKRLLKEFQSRGYLLRAFYYTTLVED--QEYSSIRP 62
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
LLDWL YNG+ VV K+A+EFT++ GR+RV+ +MD+E+AVDA E + L+H+V+FSGDG F
Sbjct: 63 LLDWLDYNGYSVVTKLAREFTDSQGRRRVRGNMDIEIAVDAMELAGSLDHIVLFSGDGDF 122
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
+LV ALQRK +V++VST+ + P + SD LRRQAD F+DL L+ +I RDP E
Sbjct: 123 RSLVEALQRKGVRVSVVSTISTQPPLISDDLRRQADVFIDLVDLQAKIGRDPAE 176
>gi|328543520|ref|YP_004303629.1| RtsE [polymorphum gilvum SL003B-26A1]
gi|326413264|gb|ADZ70327.1| RtsE [Polymorphum gilvum SL003B-26A1]
Length = 195
Score = 220 bits (561), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 100/177 (56%), Positives = 140/177 (79%), Gaps = 2/177 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFD REKIALFIDGANLY+++KA+GFDIDY+ LLK F+ + ++RAYYYT ++ D Q++
Sbjct: 1 MFDSREKIALFIDGANLYSTAKAIGFDIDYKMLLKEFQGKGYLLRAYYYTAIIED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++V+ K KEF + GR++VK +MD+ELAVDA + + ++H+V+FS
Sbjct: 59 SSIRPLIDWLDYNGYKVITKPVKEFVDASGRRKVKGNMDIELAVDAMQIVDHVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
GDG F +LV ALQRK +KV++VST+ + P M +D LRRQAD+F+DLA L ++ RDP
Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLQTQPPMIADDLRRQADHFIDLATLAAKVGRDP 175
>gi|154247759|ref|YP_001418717.1| hypothetical protein Xaut_3836 [Xanthobacter autotrophicus Py2]
gi|154161844|gb|ABS69060.1| protein of unknown function DUF88 [Xanthobacter autotrophicus Py2]
Length = 202
Score = 218 bits (556), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 101/174 (58%), Positives = 141/174 (81%), Gaps = 2/174 (1%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
EKIAL IDGANLY+++KALGFDIDY++LLK F+SR ++RA+YYTT++ D Q++S + P
Sbjct: 5 EKIALLIDGANLYSATKALGFDIDYKRLLKEFQSRGYLLRAFYYTTLIED--QEYSSIRP 62
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
LLDWL YNG+ VV K+A+EFT++ GR+RV+ +MD+E+AVDA E +E ++H+V+FSGDG F
Sbjct: 63 LLDWLDYNGYAVVTKLAREFTDSQGRRRVRGNMDIEIAVDAMELAEHVDHIVLFSGDGDF 122
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
+LV ALQRK +V++VST+ + P + +D LRRQAD F+DL L+ +I RDP E
Sbjct: 123 RSLVEALQRKGVRVSVVSTISTQPPLIADDLRRQADVFIDLVDLQPKIGRDPSE 176
>gi|296444871|ref|ZP_06886833.1| protein of unknown function DUF88 [Methylosinus trichosporium OB3b]
gi|296257539|gb|EFH04604.1| protein of unknown function DUF88 [Methylosinus trichosporium OB3b]
Length = 202
Score = 218 bits (555), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 101/179 (56%), Positives = 142/179 (79%), Gaps = 3/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
M DP E+IALFIDGANLYA++K+LGFDIDY++LL+ F+SR +IRA+YYT ++ D Q++
Sbjct: 1 MADP-ERIALFIDGANLYATAKSLGFDIDYKRLLREFQSRGRLIRAFYYTALIED--QEY 57
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG+ VV K KEF ++ GR++VK +MD+ELAVDA E +E ++HLV+FS
Sbjct: 58 SSIRPLIDWLDYNGYAVVTKPTKEFVDSLGRRKVKGNMDIELAVDAMEMAEHIDHLVLFS 117
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F +LV A+QRK +V+++ST+ + P M +D+LRRQ+D F+DL +L +I RDP E
Sbjct: 118 GDGDFRSLVEAVQRKGVRVSVISTITTQPPMIADELRRQSDEFVDLIHLVGKIGRDPGE 176
>gi|299135108|ref|ZP_07028299.1| protein of unknown function DUF88 [Afipia sp. 1NLS2]
gi|298590085|gb|EFI50289.1| protein of unknown function DUF88 [Afipia sp. 1NLS2]
Length = 212
Score = 218 bits (555), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 99/179 (55%), Positives = 137/179 (76%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
M P KIALFIDGANLYA++K LGFDIDY++LL F++R ++RA+YYT ++ D Q++
Sbjct: 1 MTSPSHKIALFIDGANLYATAKTLGFDIDYKRLLLEFQNRGTLVRAFYYTAIIED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++H+V+FS
Sbjct: 59 SSIRPLIDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDHMVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F +LV A+QR+ +VT+VST+ S P M +D+LRRQAD F DL L++++ RDP E
Sbjct: 119 GDGDFRSLVEAVQRRGVRVTVVSTISSQPPMIADELRRQADVFTDLVQLQSKLGRDPGE 177
>gi|154253305|ref|YP_001414129.1| hypothetical protein Plav_2865 [Parvibaculum lavamentivorans DS-1]
gi|154157255|gb|ABS64472.1| protein of unknown function DUF88 [Parvibaculum lavamentivorans
DS-1]
Length = 206
Score = 218 bits (555), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 99/175 (56%), Positives = 140/175 (80%), Gaps = 2/175 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+F P E+IALFIDGANLY++++ LGFDIDY++LL FRS+ +++RA+YYT ++ D Q++
Sbjct: 2 IFYPNERIALFIDGANLYSAARGLGFDIDYKRLLDHFRSKGVLVRAFYYTALLED--QEY 59
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SPL PL+DWL YNG+ VV K AKEFT+ GR+R+K +MD+ELA+DA E ++ L+HLV+FS
Sbjct: 60 SPLRPLIDWLDYNGYAVVTKPAKEFTDATGRRRIKGNMDIELAIDALEIADKLDHLVLFS 119
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
GDG F LV A+QRK K+VT+VST+ S P M +D+LRRQAD +++L +++ I R
Sbjct: 120 GDGDFRRLVDAVQRKGKRVTVVSTMRSQPPMIADELRRQADQYVELESMRDAIGR 174
>gi|27380178|ref|NP_771707.1| hypothetical protein blr5067 [Bradyrhizobium japonicum USDA 110]
gi|27353332|dbj|BAC50332.1| blr5067 [Bradyrhizobium japonicum USDA 110]
Length = 214
Score = 217 bits (552), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 99/176 (56%), Positives = 136/176 (77%), Gaps = 2/176 (1%)
Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
P KIALFIDGANLYA++K LGFDIDY++LLK F+SR ++RA+YYT ++ D Q++S +
Sbjct: 5 PTNKIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLLRAFYYTAIIED--QEYSSI 62
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
PL+DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FSGDG
Sbjct: 63 RPLIDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFSGDG 122
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
F +LV A+QR+ +VT+VST+ S P M +D+LRRQAD F DL L++++ RDP E
Sbjct: 123 DFRSLVEAVQRRGVRVTVVSTIASQPPMIADELRRQADVFTDLVELQSKLGRDPSE 178
>gi|163852608|ref|YP_001640651.1| hypothetical protein Mext_3193 [Methylobacterium extorquens PA1]
gi|218531449|ref|YP_002422265.1| hypothetical protein Mchl_3517 [Methylobacterium chloromethanicum
CM4]
gi|254562365|ref|YP_003069460.1| hypothetical protein METDI3980 [Methylobacterium extorquens DM4]
gi|163664213|gb|ABY31580.1| protein of unknown function DUF88 [Methylobacterium extorquens PA1]
gi|218523752|gb|ACK84337.1| protein of unknown function DUF88 [Methylobacterium
chloromethanicum CM4]
gi|254269643|emb|CAX25615.1| conserved hypothethical protein (DUF88) [Methylobacterium
extorquens DM4]
Length = 218
Score = 215 bits (547), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 96/175 (54%), Positives = 141/175 (80%), Gaps = 2/175 (1%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
+++ A+FIDGANLYA++KALGFDIDY++LLK F+SR +IRA+YYT ++ D Q++S +
Sbjct: 4 KQRTAVFIDGANLYATTKALGFDIDYKRLLKDFQSRDNLIRAFYYTAMIED--QEYSSIR 61
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
PL+DWL YNG++VV K KEFT++ GR+++K +MD+ELA+DA E + ++H+V+FSGDG
Sbjct: 62 PLIDWLDYNGYRVVTKPVKEFTDSAGRRKIKGNMDIELAIDALELAPHIDHMVLFSGDGD 121
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
F +LV A+QR+ +V++VST+ + P+M +D LRRQAD F+DLA+L + I RDP E
Sbjct: 122 FRSLVEAIQRRGVRVSVVSTIQTQPAMIADDLRRQADEFIDLAHLASRIGRDPSE 176
>gi|217977184|ref|YP_002361331.1| protein of unknown function DUF88 [Methylocella silvestris BL2]
gi|217502560|gb|ACK49969.1| protein of unknown function DUF88 [Methylocella silvestris BL2]
Length = 205
Score = 215 bits (547), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 99/172 (57%), Positives = 139/172 (80%), Gaps = 2/172 (1%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
+E+IALFIDGANLYA++K+LGFDIDY++LLK F+SR +IRA+YYT +V D Q++S +
Sbjct: 4 QERIALFIDGANLYATAKSLGFDIDYKRLLKEFQSRGKLIRAFYYTALVED--QEYSSIR 61
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
PL+DWL YNG+ VV K KEF ++ GR++VK +MD+ELAVDA E +E L+H+V+FSGDG
Sbjct: 62 PLVDWLDYNGYSVVTKPTKEFVDSLGRRKVKGNMDIELAVDAMEMAEHLDHIVLFSGDGD 121
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
F +LV A+QRK +V++VST + P+M +D+LRRQAD F+D+ +L ++I RD
Sbjct: 122 FRSLVEAIQRKGVRVSVVSTNATQPAMVADELRRQADEFIDIIHLASKIGRD 173
>gi|323137551|ref|ZP_08072628.1| protein of unknown function DUF88 [Methylocystis sp. ATCC 49242]
gi|322397177|gb|EFX99701.1| protein of unknown function DUF88 [Methylocystis sp. ATCC 49242]
Length = 203
Score = 214 bits (546), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 96/174 (55%), Positives = 139/174 (79%), Gaps = 2/174 (1%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
E+IALFIDGANLYA++K+LGFDIDY++LL+ F+ + +IRA+YYT ++ D Q++S + P
Sbjct: 5 ERIALFIDGANLYATAKSLGFDIDYKRLLREFQGKGRLIRAFYYTALIED--QEYSSIRP 62
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
L+DWL YNG+ VV K KEF ++ GR++VK +MD+ELAVDA E +E ++H+V+FSGDG F
Sbjct: 63 LIDWLDYNGYAVVTKPTKEFVDSLGRRKVKGNMDIELAVDAMEMAEHIDHMVLFSGDGDF 122
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
+LV A+QRK +V+++ST+ + P M +D+LRRQAD F+DL +L ++I RDP E
Sbjct: 123 RSLVEAVQRKGVRVSVISTITTQPPMIADELRRQADEFIDLIHLVSKIGRDPGE 176
>gi|118587968|ref|ZP_01545378.1| hypothetical protein SIAM614_10343 [Stappia aggregata IAM 12614]
gi|118439590|gb|EAV46221.1| hypothetical protein SIAM614_10343 [Stappia aggregata IAM 12614]
Length = 188
Score = 214 bits (546), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 97/170 (57%), Positives = 137/170 (80%), Gaps = 2/170 (1%)
Query: 10 LFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDW 69
+FIDGANLY+++KA+GFDIDY++LLK F+ +A ++RAYYYT ++ D Q++S + PL+DW
Sbjct: 1 MFIDGANLYSTAKAIGFDIDYKRLLKEFQGQAYLLRAYYYTALIED--QEYSSIRPLIDW 58
Query: 70 LHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLV 129
L YNG++V+ K KEF ++ GR++VK +MD+ELAVDA E E ++H+V+FSGDG F +LV
Sbjct: 59 LDYNGYKVITKPVKEFVDSAGRRKVKGNMDIELAVDAMELVESVDHVVLFSGDGDFRSLV 118
Query: 130 AALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
ALQRK +KV++VST+ + P M +D LRRQAD+F+DLA L N+I RDP E
Sbjct: 119 EALQRKGRKVSVVSTLKTQPPMIADDLRRQADHFIDLASLANKIGRDPSE 168
>gi|188582630|ref|YP_001926075.1| hypothetical protein Mpop_3389 [Methylobacterium populi BJ001]
gi|179346128|gb|ACB81540.1| protein of unknown function DUF88 [Methylobacterium populi BJ001]
Length = 217
Score = 214 bits (546), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 97/175 (55%), Positives = 140/175 (80%), Gaps = 2/175 (1%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
+++ A+FIDGANLYA++KALGFDIDY++LLK F+SR +IRA+YYT ++ D Q++S +
Sbjct: 4 KQRTAVFIDGANLYATTKALGFDIDYKRLLKDFQSRDNLIRAFYYTAMIED--QEYSSIR 61
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
PL+DWL YNG++VV K KEFT++ GR++VK +MD+ELA+DA E + ++H+V+FSGDG
Sbjct: 62 PLIDWLDYNGYRVVTKPVKEFTDSAGRRKVKGNMDIELAIDALELAPYIDHMVLFSGDGD 121
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
F +LV A+QR+ +V++VST+ + P+M +D LRRQAD F+DLA+L I RDP E
Sbjct: 122 FRSLVEAIQRRGVRVSVVSTIQTQPAMIADDLRRQADEFIDLAHLAGRIGRDPSE 176
>gi|298291613|ref|YP_003693552.1| hypothetical protein Snov_1628 [Starkeya novella DSM 506]
gi|296928124|gb|ADH88933.1| protein of unknown function DUF88 [Starkeya novella DSM 506]
Length = 203
Score = 214 bits (546), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 99/172 (57%), Positives = 137/172 (79%), Gaps = 2/172 (1%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
EKIALFIDGANLY+++K+LGFDIDY++LLK F+ R V+RA+YYTT+V D E +S + P
Sbjct: 2 EKIALFIDGANLYSATKSLGFDIDYKRLLKEFQGRGYVLRAFYYTTLVEDSE--YSSIRP 59
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
LLDWL YNG+ VV K A+EFT++ GR+RV+ +MD+ELAV+A E + ++H+V+FSGDG F
Sbjct: 60 LLDWLDYNGYSVVTKPAREFTDSQGRRRVRGNMDIELAVNAMELAGHVDHIVLFSGDGDF 119
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
+LV A+QRK +VT+VS++ + P M +D+LRRQAD F+DL L+ + RDP
Sbjct: 120 RSLVEAIQRKGVRVTVVSSIHTQPPMIADELRRQADVFLDLVDLQGRVGRDP 171
>gi|146341383|ref|YP_001206431.1| hypothetical protein BRADO4470 [Bradyrhizobium sp. ORS278]
gi|146194189|emb|CAL78210.1| conserved hypothetical protein with DNA-binding domain (DUF88)
[Bradyrhizobium sp. ORS278]
Length = 216
Score = 214 bits (546), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 97/173 (56%), Positives = 135/173 (78%), Gaps = 2/173 (1%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
KIALFIDGANLYA++K LGFDIDY++LLK F+SR ++RA+YYT ++ D Q++S + PL
Sbjct: 7 KIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLLRAFYYTAIIED--QEYSSIRPL 64
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126
+DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FSGDG F
Sbjct: 65 IDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFSGDGDFR 124
Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
+LV A+QR+ +VT++ST+ S P M +D+LRRQAD F DL L++++ RDP E
Sbjct: 125 SLVEAMQRRGVRVTVISTISSQPPMIADELRRQADVFTDLVELQSKLGRDPSE 177
>gi|170748311|ref|YP_001754571.1| hypothetical protein Mrad2831_1893 [Methylobacterium radiotolerans
JCM 2831]
gi|170654833|gb|ACB23888.1| protein of unknown function DUF88 [Methylobacterium radiotolerans
JCM 2831]
Length = 213
Score = 214 bits (546), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 97/174 (55%), Positives = 138/174 (79%), Gaps = 2/174 (1%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
++ A+FIDGANLYA++KALGFDIDY+KLLK F+SR ++RA+YYT ++ D Q++S + P
Sbjct: 5 QRSAIFIDGANLYATTKALGFDIDYKKLLKEFQSRENLLRAFYYTAMIED--QEYSSIRP 62
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
L+DWL YNG++VV K KEFT++ GR++ K +MD+ELA+DA E S ++H+++FSGDG F
Sbjct: 63 LIDWLDYNGYRVVTKPVKEFTDSMGRRKYKGNMDIELAIDALELSPHIDHMILFSGDGDF 122
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
+LV A+QR+ KVT++ST+ + P+M SD+LRRQAD F+DLA L I R+P E
Sbjct: 123 RSLVEAMQRRGVKVTVISTIQTQPAMISDELRRQADEFVDLASLAGRIGREPGE 176
>gi|182679399|ref|YP_001833545.1| hypothetical protein Bind_2447 [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182635282|gb|ACB96056.1| protein of unknown function DUF88 [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 203
Score = 214 bits (546), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 99/174 (56%), Positives = 140/174 (80%), Gaps = 2/174 (1%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
E+IALFIDGANLYA++K+LGFDIDY++LLK F+S+ +IRA+YYT +V D Q++S + P
Sbjct: 5 ERIALFIDGANLYATAKSLGFDIDYKRLLKEFQSKGKLIRAFYYTALVED--QEYSSIRP 62
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
L+DWL YNG+ VV K KEF ++ GR++VK +MD+ELAVDA E +E L+H+V+FSGDG F
Sbjct: 63 LIDWLDYNGYSVVTKPTKEFVDSLGRRKVKGNMDIELAVDAMEMAEHLDHIVLFSGDGDF 122
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
+LV A+QRK +V++VST + P+M +D+LRRQAD F+DL +L ++I R+ +E
Sbjct: 123 RSLVEAVQRKGVRVSVVSTNTTQPAMVADELRRQADEFIDLIHLASKIGREQNE 176
>gi|90424132|ref|YP_532502.1| hypothetical protein RPC_2633 [Rhodopseudomonas palustris BisB18]
gi|90106146|gb|ABD88183.1| protein of unknown function DUF88 [Rhodopseudomonas palustris
BisB18]
Length = 208
Score = 214 bits (545), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 97/173 (56%), Positives = 135/173 (78%), Gaps = 2/173 (1%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
KIALFIDGANLYA++K LGFDIDY++LLK F+SR ++RA+YYT ++ D Q++S + PL
Sbjct: 7 KIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLVRAFYYTAIIED--QEYSSIRPL 64
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126
+DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FSGDG F
Sbjct: 65 IDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFSGDGDFR 124
Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
+LV A+QR+ +VT++ST+ S P M +D+LRRQAD F DL L++++ RDP E
Sbjct: 125 SLVEAVQRRGVRVTVISTISSQPPMIADELRRQADVFTDLVELQSKLGRDPAE 177
>gi|148256038|ref|YP_001240623.1| hypothetical protein BBta_4689 [Bradyrhizobium sp. BTAi1]
gi|146408211|gb|ABQ36717.1| hypothetical protein BBta_4689 [Bradyrhizobium sp. BTAi1]
Length = 217
Score = 214 bits (545), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 97/173 (56%), Positives = 135/173 (78%), Gaps = 2/173 (1%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
KIALFIDGANLYA++K LGFDIDY++LLK F+SR ++RA+YYT ++ D Q++S + PL
Sbjct: 7 KIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLLRAFYYTAIIED--QEYSSIRPL 64
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126
+DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FSGDG F
Sbjct: 65 IDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFSGDGDFR 124
Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
+LV A+QR+ +VT++ST+ S P M +D+LRRQAD F DL L++++ RDP E
Sbjct: 125 SLVEAMQRRGVRVTVISTISSQPPMIADELRRQADVFTDLVELQSKLGRDPSE 177
>gi|312114934|ref|YP_004012530.1| hypothetical protein Rvan_2206 [Rhodomicrobium vannielii ATCC
17100]
gi|311220063|gb|ADP71431.1| hypothetical protein Rvan_2206 [Rhodomicrobium vannielii ATCC
17100]
Length = 210
Score = 214 bits (544), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 99/174 (56%), Positives = 136/174 (78%), Gaps = 2/174 (1%)
Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
F E+IALFIDGANLYA++KALGFDIDY++LL FR++ +++RA YYT + EQ++S
Sbjct: 3 FYTTERIALFIDGANLYATAKALGFDIDYKRLLNLFRNKGVLLRALYYTALA--EEQEYS 60
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
+ PL+DWL YNG+ +V K KEFT+ GR+++K +MD+ELAVDA E SE L+H+++FSG
Sbjct: 61 SIRPLIDWLDYNGYSMVTKPTKEFTDASGRRKIKGNMDIELAVDAMELSEHLDHIILFSG 120
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
DG F TLV ALQ K K+V++VST+ + P M +D+LRRQAD F+DLA L+ +I R
Sbjct: 121 DGDFRTLVEALQHKGKRVSVVSTLTTQPPMVADELRRQADQFIDLADLQKDICR 174
>gi|91977116|ref|YP_569775.1| hypothetical protein RPD_2645 [Rhodopseudomonas palustris BisB5]
gi|91683572|gb|ABE39874.1| protein of unknown function DUF88 [Rhodopseudomonas palustris
BisB5]
Length = 228
Score = 214 bits (544), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 98/171 (57%), Positives = 134/171 (78%), Gaps = 2/171 (1%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
KIALFIDGANLYA++K LGFDIDY++LLK F+SR +IRA+YYT ++ D Q++S + PL
Sbjct: 27 KIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLIRAFYYTAIIED--QEYSSIRPL 84
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126
+DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FSGDG F
Sbjct: 85 IDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFSGDGDFR 144
Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
+LV A+QR+ +VT++ST+ S P M +D+LRRQAD F DL L+++I RDP
Sbjct: 145 SLVEAVQRRGVRVTVISTISSQPPMIADELRRQADTFTDLVELQSKIGRDP 195
>gi|86749724|ref|YP_486220.1| hypothetical protein RPB_2606 [Rhodopseudomonas palustris HaA2]
gi|86572752|gb|ABD07309.1| Protein of unknown function DUF88 [Rhodopseudomonas palustris HaA2]
Length = 209
Score = 214 bits (544), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 98/171 (57%), Positives = 133/171 (77%), Gaps = 2/171 (1%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
KIALFIDGANLYA++K LGFDIDY++LLK F SR +IRA+YYT ++ D Q++S + PL
Sbjct: 8 KIALFIDGANLYATAKTLGFDIDYKRLLKEFHSRGTLIRAFYYTAIIED--QEYSSIRPL 65
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126
+DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FSGDG F
Sbjct: 66 IDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFSGDGDFR 125
Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
+LV A+QR+ +VT++ST+ S P M +D+LRRQAD F DL L+++I RDP
Sbjct: 126 SLVEAVQRRGVRVTVISTISSQPPMIADELRRQADVFTDLVELQSKIGRDP 176
>gi|85715063|ref|ZP_01046047.1| hypothetical protein NB311A_00725 [Nitrobacter sp. Nb-311A]
gi|85697978|gb|EAQ35851.1| hypothetical protein NB311A_00725 [Nitrobacter sp. Nb-311A]
Length = 205
Score = 214 bits (544), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 98/173 (56%), Positives = 134/173 (77%), Gaps = 2/173 (1%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
KIALFIDGANLYA++K LGFDIDY++LLK F+SR ++RA+YYT ++ D Q++S + PL
Sbjct: 7 KIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLVRAFYYTAIIED--QEYSSIRPL 64
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126
+DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FSGDG F
Sbjct: 65 IDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHVDQIVLFSGDGDFR 124
Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
+LV A+QR+ +VT+VST+ S P M +D+LRRQAD F DL L+ ++ RDP E
Sbjct: 125 SLVEAVQRRGVRVTVVSTIASQPPMIADELRRQADVFTDLVELQPKLGRDPSE 177
>gi|92117780|ref|YP_577509.1| hypothetical protein Nham_2257 [Nitrobacter hamburgensis X14]
gi|91800674|gb|ABE63049.1| protein of unknown function DUF88 [Nitrobacter hamburgensis X14]
Length = 206
Score = 213 bits (543), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 99/179 (55%), Positives = 135/179 (75%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
M KIALFIDGANLYA++K LGFDIDY++LLK F+SR ++RA+YYT ++ D Q++
Sbjct: 1 MSSASNKIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLVRAFYYTAIIED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FS
Sbjct: 59 SSIRPLIDWLDYNGYTVVTKATKEFVDASGRRKVKGNMDIELAVDAMELAEHVDQIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F +LV A+QR+ +VT+VST+ S P M +D+LRRQAD F DL L+ ++ RDP E
Sbjct: 119 GDGDFRSLVEAVQRRGVRVTVVSTISSQPPMIADELRRQADVFTDLVELQPKLGRDPSE 177
>gi|75676115|ref|YP_318536.1| hypothetical protein Nwi_1924 [Nitrobacter winogradskyi Nb-255]
gi|74420985|gb|ABA05184.1| Protein of unknown function DUF88 [Nitrobacter winogradskyi Nb-255]
Length = 205
Score = 213 bits (542), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 98/173 (56%), Positives = 134/173 (77%), Gaps = 2/173 (1%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
KIALFIDGANLYA++K LGFDIDY++LLK F+SR ++RA+YYT ++ D Q++S + PL
Sbjct: 7 KIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLVRAFYYTAIIED--QEYSSIRPL 64
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126
+DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FSGDG F
Sbjct: 65 IDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHVDQIVLFSGDGDFR 124
Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
+LV A+QR+ +VT+VST+ S P M +D+LRRQAD F DL L+ ++ RDP E
Sbjct: 125 SLVEAVQRRGVRVTVVSTIASQPPMIADELRRQADVFTDLVELQPKLGRDPSE 177
>gi|115525034|ref|YP_781945.1| hypothetical protein RPE_3028 [Rhodopseudomonas palustris BisA53]
gi|115518981|gb|ABJ06965.1| protein of unknown function DUF88 [Rhodopseudomonas palustris
BisA53]
Length = 209
Score = 213 bits (542), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 97/173 (56%), Positives = 135/173 (78%), Gaps = 2/173 (1%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
KIALFIDGANLYA++K LGFDIDY++LLK F+SR ++RA+YYT ++ D Q++S + PL
Sbjct: 6 KIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLVRAFYYTAIIED--QEYSSIRPL 63
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126
+DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FSGDG F
Sbjct: 64 IDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHVDQIVLFSGDGDFR 123
Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
+LV A+QR+ +VT++ST+ S P M +D+LRRQAD F DL L++++ RDP E
Sbjct: 124 SLVEAVQRRGVRVTVISTISSQPPMIADELRRQADVFTDLVELQSKLGRDPAE 176
>gi|209884968|ref|YP_002288825.1| DUF88 [Oligotropha carboxidovorans OM5]
gi|209873164|gb|ACI92960.1| DUF88 [Oligotropha carboxidovorans OM5]
Length = 213
Score = 213 bits (542), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 98/173 (56%), Positives = 134/173 (77%), Gaps = 2/173 (1%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
KIALFIDGANLYA++K LGFDIDY++LL F+SR ++RA+YYT ++ D Q++S + PL
Sbjct: 8 KIALFIDGANLYATAKTLGFDIDYKRLLLEFQSRGSLVRAFYYTAIIED--QEYSSIRPL 65
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126
+DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FSGDG F
Sbjct: 66 IDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFSGDGDFR 125
Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
+LV A+QR+ +VT+VST+ S P M +D+LRRQAD F DL L+++I RDP E
Sbjct: 126 SLVEAVQRRGVRVTVVSTIASQPPMIADELRRQADVFTDLVQLQSKIGRDPGE 178
>gi|39935757|ref|NP_948033.1| hypothetical protein RPA2691 [Rhodopseudomonas palustris CGA009]
gi|192291344|ref|YP_001991949.1| hypothetical protein Rpal_2966 [Rhodopseudomonas palustris TIE-1]
gi|39649610|emb|CAE28132.1| DUF88 [Rhodopseudomonas palustris CGA009]
gi|192285093|gb|ACF01474.1| protein of unknown function DUF88 [Rhodopseudomonas palustris
TIE-1]
Length = 216
Score = 213 bits (541), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 97/171 (56%), Positives = 134/171 (78%), Gaps = 2/171 (1%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
KIALFIDGANLYA++K LGFDIDY++LLK F+SR ++RA+YYT ++ D Q++S + PL
Sbjct: 8 KIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGNLVRAFYYTAIIED--QEYSSIRPL 65
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126
+DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FSGDG F
Sbjct: 66 IDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFSGDGDFR 125
Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
+LV A+QR+ +VT++ST+ S P M +D+LRRQAD F DL L+++I RDP
Sbjct: 126 SLVEAVQRRGVRVTVISTISSQPPMIADELRRQADIFTDLVELQSKIGRDP 176
>gi|295690031|ref|YP_003593724.1| hypothetical protein Cseg_2656 [Caulobacter segnis ATCC 21756]
gi|295431934|gb|ADG11106.1| protein of unknown function DUF88 [Caulobacter segnis ATCC 21756]
Length = 198
Score = 212 bits (540), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 101/174 (58%), Positives = 132/174 (75%), Gaps = 2/174 (1%)
Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
F P ++IALFIDGANLY+++KALGFDIDYRKLL F+ R ++IRAYYYT + + + +S
Sbjct: 3 FYPTDRIALFIDGANLYSAAKALGFDIDYRKLLDEFKKRGVLIRAYYYTAIAENDD--YS 60
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
P+ PL+DWL YNGF +V K A+EFT++ GRKR + MD+E+AVD + +E +HLV+FSG
Sbjct: 61 PIRPLVDWLDYNGFTLVTKPAREFTDSQGRKRWRGDMDIEIAVDMLQMAETADHLVLFSG 120
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
DG F LV A+QRK ++VT+VST+ S P M SD LRRQAD F+DLA L I R
Sbjct: 121 DGDFRALVEAVQRKGRRVTVVSTMKSQPPMTSDDLRRQADNFVDLADLGGIIGR 174
>gi|16125797|ref|NP_420361.1| hypothetical protein CC_1550 [Caulobacter crescentus CB15]
gi|221234556|ref|YP_002516992.1| cytosolic protein [Caulobacter crescentus NA1000]
gi|13422935|gb|AAK23529.1| conserved hypothetical protein [Caulobacter crescentus CB15]
gi|220963728|gb|ACL95084.1| hypothetical cytosolic protein [Caulobacter crescentus NA1000]
Length = 198
Score = 212 bits (540), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 101/174 (58%), Positives = 133/174 (76%), Gaps = 2/174 (1%)
Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
F P +++ALFIDGANLY+++KALGFDIDYRKLL F+ R ++IRAYYYT + + + +S
Sbjct: 3 FYPTDRLALFIDGANLYSAAKALGFDIDYRKLLDEFKKRGVLIRAYYYTAIAENDD--YS 60
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
P+ PL+DWL YNGF +V K A+EFT++ GRKR + MD+E+AVD + +E +HLV+FSG
Sbjct: 61 PIRPLVDWLDYNGFTLVTKPAREFTDSQGRKRWRGDMDIEIAVDMLQIAETADHLVLFSG 120
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
DG F LV A+QRK ++VT+VST+ S P M SD LRRQAD F+DLA L N I R
Sbjct: 121 DGDFRALVEAVQRKGRRVTVVSTMKSQPPMTSDDLRRQADNFVDLADLGNIIGR 174
>gi|316934150|ref|YP_004109132.1| hypothetical protein Rpdx1_2816 [Rhodopseudomonas palustris DX-1]
gi|315601864|gb|ADU44399.1| hypothetical protein Rpdx1_2816 [Rhodopseudomonas palustris DX-1]
Length = 213
Score = 211 bits (538), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 96/171 (56%), Positives = 133/171 (77%), Gaps = 2/171 (1%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
KIALFIDGANLYA++K LGFDIDY++LLK F+ R ++RA+YYT ++ D Q++S + PL
Sbjct: 8 KIALFIDGANLYATAKTLGFDIDYKRLLKEFQGRGNLVRAFYYTAIIED--QEYSSIRPL 65
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126
+DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FSGDG F
Sbjct: 66 IDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFSGDGDFR 125
Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
+LV A+QR+ +VT++ST+ S P M +D+LRRQAD F DL L+++I RDP
Sbjct: 126 SLVEAVQRRGVRVTVISTISSQPPMIADELRRQADIFTDLVELQSKIGRDP 176
>gi|170738400|ref|YP_001767055.1| hypothetical protein M446_0033 [Methylobacterium sp. 4-46]
gi|168192674|gb|ACA14621.1| protein of unknown function DUF88 [Methylobacterium sp. 4-46]
Length = 216
Score = 211 bits (538), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 98/171 (57%), Positives = 134/171 (78%), Gaps = 2/171 (1%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
++ ALFIDGAN+YA++KALGFDIDYRKLL FRSR +IRA+YYT ++ D Q++S + P
Sbjct: 4 QRSALFIDGANVYATTKALGFDIDYRKLLADFRSRENLIRAFYYTALIED--QEYSSIRP 61
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
L+DWL YNG++VV K AKEFT++ GR+++K +MD+EL +DA E S ++H+V+FSGDG F
Sbjct: 62 LIDWLDYNGYRVVTKPAKEFTDSTGRRKIKGNMDIELTIDALELSPYIDHMVLFSGDGDF 121
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
LVAA+QR+ +VT+VST+ + P M SD LRRQAD F+D+ +L I RD
Sbjct: 122 KPLVAAMQRRGVRVTVVSTIQTQPPMVSDDLRRQADDFVDIVHLIPRIGRD 172
>gi|27377446|ref|NP_768975.1| hypothetical protein bll2335 [Bradyrhizobium japonicum USDA 110]
gi|27350590|dbj|BAC47600.1| bll2335 [Bradyrhizobium japonicum USDA 110]
Length = 203
Score = 211 bits (537), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 101/173 (58%), Positives = 137/173 (79%), Gaps = 3/173 (1%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
EKIALFIDG+NL+A+SKALGFDIDYR+LL F+SR ++RA+YYTT++ D Q++S + P
Sbjct: 5 EKIALFIDGSNLHATSKALGFDIDYRRLLGEFQSRGALLRAFYYTTLIED--QEYSSIRP 62
Query: 66 LLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
L+DWL YNG+ VV K KEF + GR++VK SMDV+LAV+A E +E ++ +V+FSGDG
Sbjct: 63 LIDWLDYNGYTVVTKFTKEFVDAITGRRKVKGSMDVDLAVNAMELAEHVDQIVLFSGDGN 122
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
F +LV ALQR+ +VT+VST+ + P+M +D LRRQAD F+DLA LK ++ RDP
Sbjct: 123 FRSLVEALQRRGVRVTVVSTLCTQPAMVADDLRRQADVFIDLAELKPKVGRDP 175
>gi|197105347|ref|YP_002130724.1| hypothetical protein PHZ_c1884 [Phenylobacterium zucineum HLK1]
gi|196478767|gb|ACG78295.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
Length = 195
Score = 211 bits (536), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 100/174 (57%), Positives = 135/174 (77%), Gaps = 2/174 (1%)
Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
F P +++ALFIDGANLY+++K LGFDIDYRKLL+ FR R++++RAYYYT +V + E +S
Sbjct: 3 FYPTDRLALFIDGANLYSAAKNLGFDIDYRKLLEEFRKRSVLVRAYYYTALVENEE--YS 60
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
P+ PL+DWL YNG+++V K A+E+T++ GRKR + MDVE+AVD E + +HLV+FSG
Sbjct: 61 PIRPLVDWLDYNGYRLVTKSAREYTDSQGRKRWRGDMDVEIAVDMLEMAAHADHLVLFSG 120
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
DG F LV A+QRK +VT+VST+ S P M SD+LRRQAD F+DLA L + I R
Sbjct: 121 DGDFRALVEAVQRKGSRVTVVSTLKSQPPMVSDELRRQADSFVDLADLADIIGR 174
>gi|163793037|ref|ZP_02187013.1| hypothetical protein BAL199_24649 [alpha proteobacterium BAL199]
gi|159181683|gb|EDP66195.1| hypothetical protein BAL199_24649 [alpha proteobacterium BAL199]
Length = 218
Score = 211 bits (536), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 98/175 (56%), Positives = 137/175 (78%), Gaps = 2/175 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+F P EK+ALFIDGANLY++++ALGFDIDY++LL F S+A +IRA+YYT ++ D Q++
Sbjct: 2 LFYPHEKVALFIDGANLYSAARALGFDIDYKRLLVLFGSKANLIRAFYYTALLED--QEY 59
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWL YNG+ +V K AKEFT++ GR+R+K +MD+ELAVD E + L+H+V+FS
Sbjct: 60 SPIRPLVDWLDYNGYSLVTKPAKEFTDSQGRRRIKGNMDIELAVDMMEMVDRLDHVVLFS 119
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
GDG F +L+ A+QRK + T+VST+ S P M +D+LRRQAD F+DL L +I R
Sbjct: 120 GDGDFRSLIEAVQRKGVRATVVSTIRSSPPMIADELRRQADQFIDLDQLAGDIER 174
>gi|300023756|ref|YP_003756367.1| hypothetical protein Hden_2248 [Hyphomicrobium denitrificans ATCC
51888]
gi|299525577|gb|ADJ24046.1| protein of unknown function DUF88 [Hyphomicrobium denitrificans
ATCC 51888]
Length = 213
Score = 210 bits (534), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 97/174 (55%), Positives = 136/174 (78%), Gaps = 2/174 (1%)
Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
F P E+IALFIDGANLYA++K+LGFDIDY++LL FR + ++RA YYT + EQ++S
Sbjct: 3 FYPTERIALFIDGANLYATAKSLGFDIDYKRLLGLFRQKGQLVRALYYTALA--EEQEYS 60
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
+ PL+DWL YNGF +V K KEFT+ GR++VK +MD+EL VDA ++ L+H+VIFSG
Sbjct: 61 SIRPLIDWLDYNGFSMVTKPTKEFTDATGRRKVKGNMDIELTVDAMLLADSLDHIVIFSG 120
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
DG F +LVAALQ+K K+V+++ST+ + P M +D+LRRQAD F+DLA L++++ R
Sbjct: 121 DGDFRSLVAALQQKGKRVSVISTLQTQPPMVADELRRQADQFIDLADLEDQVGR 174
>gi|167645687|ref|YP_001683350.1| hypothetical protein Caul_1723 [Caulobacter sp. K31]
gi|167348117|gb|ABZ70852.1| protein of unknown function DUF88 [Caulobacter sp. K31]
Length = 207
Score = 209 bits (532), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 98/174 (56%), Positives = 133/174 (76%), Gaps = 2/174 (1%)
Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
F P E++ALFIDGAN ++++K+LGFDIDYRKLL FR R +++RAYYYT + + +++S
Sbjct: 3 FYPTERLALFIDGANFFSAAKSLGFDIDYRKLLDEFRKRGLLVRAYYYTAIAEN--EEYS 60
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
P+ PL+DWL YNGF +V K A+EFT++ GRKR + MD+E+AVD E + ++HLV+FSG
Sbjct: 61 PIRPLVDWLDYNGFTLVTKPAREFTDSQGRKRWRGDMDIEIAVDMLEMAATVDHLVLFSG 120
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
DG F V A+QRK ++VT+VST+ S P MASD LRRQAD F+DLA L + I R
Sbjct: 121 DGDFRAAVEAVQRKGRRVTVVSTMKSQPPMASDDLRRQADNFVDLADLGSIIGR 174
>gi|83593194|ref|YP_426946.1| hypothetical protein Rru_A1859 [Rhodospirillum rubrum ATCC 11170]
gi|83576108|gb|ABC22659.1| Protein of unknown function DUF88 [Rhodospirillum rubrum ATCC
11170]
Length = 214
Score = 209 bits (531), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 97/177 (54%), Positives = 137/177 (77%), Gaps = 2/177 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+F P+E+I LFIDG+NLYA+++ALGFDIDY++LL+ F ++ +IRA+YYT +V D Q++
Sbjct: 2 IFYPQERIGLFIDGSNLYAAARALGFDIDYKRLLELFAAKGRLIRAFYYTALVED--QEY 59
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWL YNG+ +V K KEFT+ GR+++K +MD+ELA+D E + L+H+V+FS
Sbjct: 60 SPIRPLVDWLDYNGYTMVTKPTKEFTDATGRRKIKGNMDIELAIDVMEMAPHLDHIVLFS 119
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
GDG F LV A+QRK +VT+VSTV S P M +D+LRRQAD F++L L+ IAR P
Sbjct: 120 GDGDFRRLVDAVQRKGLRVTVVSTVRSQPPMVADELRRQADTFIELLDLEPSIARAP 176
>gi|307322655|ref|ZP_07601988.1| protein of unknown function DUF88 [Sinorhizobium meliloti AK83]
gi|306891701|gb|EFN22554.1| protein of unknown function DUF88 [Sinorhizobium meliloti AK83]
Length = 200
Score = 208 bits (530), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 97/179 (54%), Positives = 138/179 (77%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFD REKIALFIDG +L+++S++LGF+IDYR++L+AFR R ++R Y YT V+ D +
Sbjct: 1 MFDSREKIALFIDGPSLFSASRSLGFEIDYRRVLEAFRRRGYLLRVYLYTAVIEDDAHK- 59
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
+ +DWL YNG+QVV KVA +FT+ G++++K +M +ELA+DA EQ+ ++HLVI +
Sbjct: 60 -SMRSWIDWLDYNGYQVVTKVAVKFTDFAGQQKIKGNMALELAIDAMEQASNVDHLVIVT 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GD F LV A+QRK +KV+IVST+LS P M +D LRRQAD+F+DLA L++EIAR+P +
Sbjct: 119 GDSVFLALVEAIQRKGRKVSIVSTMLSRPPMVADDLRRQADHFIDLATLQHEIAREPSK 177
>gi|220920088|ref|YP_002495389.1| hypothetical protein Mnod_0035 [Methylobacterium nodulans ORS 2060]
gi|219944694|gb|ACL55086.1| protein of unknown function DUF88 [Methylobacterium nodulans ORS
2060]
Length = 219
Score = 208 bits (530), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 97/171 (56%), Positives = 134/171 (78%), Gaps = 2/171 (1%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
++ ALFIDGAN+YA++KALGFDIDYRKLL F++R +IRA+YYT +V D Q++S + P
Sbjct: 4 QRSALFIDGANVYATTKALGFDIDYRKLLADFKARENLIRAFYYTALVED--QEYSSIRP 61
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
L+DWL YNG++VV K AKEFT++ GR++VK +MD+EL +DA E S ++H+V+FSGDG F
Sbjct: 62 LIDWLDYNGYRVVTKPAKEFTDSSGRRKVKGNMDIELTIDALELSPYIDHMVLFSGDGDF 121
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
LVAA+QR+ +VT+VST+ + P M +D LRRQAD F+D+ +L I RD
Sbjct: 122 KPLVAAMQRRGVRVTVVSTIQTQPPMVADDLRRQADDFVDIVHLIPRIGRD 172
>gi|315499955|ref|YP_004088758.1| hypothetical protein Astex_2970 [Asticcacaulis excentricus CB 48]
gi|315417967|gb|ADU14607.1| hypothetical protein Astex_2970 [Asticcacaulis excentricus CB 48]
Length = 189
Score = 207 bits (527), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 103/175 (58%), Positives = 131/175 (74%), Gaps = 4/175 (2%)
Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVV-GDPEQQF 60
F P +KIALFIDGANLY+++KAL FDIDYRKLL FR R I++RAYYYT +V GD +
Sbjct: 3 FYPTDKIALFIDGANLYSAAKALNFDIDYRKLLDEFRKRGILLRAYYYTALVEGD---DY 59
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWL YNGF ++ K AKE+T+ GRKR + MD+E+A D E +E +HLV+FS
Sbjct: 60 SPIRPLVDWLDYNGFALITKTAKEYTDAQGRKRWRGDMDIEIACDMMEIAEHADHLVLFS 119
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
GDG F L+ A+QRK +VT+VSTV S P M SD+LRRQAD F+DLA L + + R
Sbjct: 120 GDGDFRRLIEAVQRKGCRVTVVSTVKSQPPMTSDELRRQADTFVDLADLASVVGR 174
>gi|86137266|ref|ZP_01055844.1| hypothetical protein MED193_16367 [Roseobacter sp. MED193]
gi|85826590|gb|EAQ46787.1| hypothetical protein MED193_16367 [Roseobacter sp. MED193]
Length = 190
Score = 207 bits (526), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 98/179 (54%), Positives = 138/179 (77%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + E +
Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+ELAVDA E + ++H+V+FS
Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELAVDAMELAPRVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F L+A+LQR+ +V++VST+ S P M SD+LRRQAD F++L LK+ I R P E
Sbjct: 119 GDGDFRPLIASLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELEELKDVIGRPPRE 177
>gi|99082408|ref|YP_614562.1| hypothetical protein TM1040_2568 [Ruegeria sp. TM1040]
gi|99038688|gb|ABF65300.1| protein of unknown function DUF88 [Ruegeria sp. TM1040]
Length = 189
Score = 206 bits (525), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 97/179 (54%), Positives = 137/179 (76%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYAS+KALGFDIDY+ L + F R ++RA+YYT ++ + E +
Sbjct: 1 MFYKDERLALFIDGSNLYASAKALGFDIDYKLLRQEFMRRGKLVRAFYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS
Sbjct: 59 SPIRPLVDWLHYNGFSMVTKPAKEYTDSMGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F L+A+LQR+ +V++VST+ S P M SD+LRRQAD F++L L++ I R P E
Sbjct: 119 GDGDFRPLIASLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELEELRDVIGRPPRE 177
>gi|163738230|ref|ZP_02145646.1| hypothetical protein RGBS107_07449 [Phaeobacter gallaeciensis
BS107]
gi|163740168|ref|ZP_02147562.1| hypothetical protein RG210_08712 [Phaeobacter gallaeciensis 2.10]
gi|161386026|gb|EDQ10401.1| hypothetical protein RG210_08712 [Phaeobacter gallaeciensis 2.10]
gi|161388846|gb|EDQ13199.1| hypothetical protein RGBS107_07449 [Phaeobacter gallaeciensis
BS107]
Length = 189
Score = 205 bits (522), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 97/179 (54%), Positives = 137/179 (76%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + E +
Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS
Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F L+A+LQR+ +V++VST+ S P M SD+LRRQAD F++L LK+ I R P E
Sbjct: 119 GDGDFRPLIASLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELEELKDVIGRPPRE 177
>gi|259417563|ref|ZP_05741482.1| hypothetical protein SCH4B_2747 [Silicibacter sp. TrichCH4B]
gi|259346469|gb|EEW58283.1| hypothetical protein SCH4B_2747 [Silicibacter sp. TrichCH4B]
Length = 189
Score = 205 bits (522), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 96/177 (54%), Positives = 136/177 (76%), Gaps = 2/177 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYAS+KALGFDIDY+ L + F R ++RA+YYT ++ + E +
Sbjct: 1 MFYKDERLALFIDGSNLYASAKALGFDIDYKLLRQEFMRRGKLVRAFYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS
Sbjct: 59 SPIRPLVDWLHYNGFSMVTKPAKEYTDSMGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
GDG F L+A+LQR+ +V++VST+ S P M SD+LRRQAD F++L L++ I R P
Sbjct: 119 GDGDFRPLIASLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELEELRDVIGRPP 175
>gi|56698038|ref|YP_168409.1| hypothetical protein SPO3206 [Ruegeria pomeroyi DSS-3]
gi|56679775|gb|AAV96441.1| conserved hypothetical protein [Ruegeria pomeroyi DSS-3]
Length = 190
Score = 204 bits (519), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 97/179 (54%), Positives = 136/179 (75%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + E +
Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKMLRAFYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS
Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F LVA+LQR+ +V++VST+ S P M SD+LRRQAD F++L L+ I R P E
Sbjct: 119 GDGDFRPLVASLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELEELREVIGRPPRE 177
>gi|254477746|ref|ZP_05091132.1| DUF88 [Ruegeria sp. R11]
gi|214031989|gb|EEB72824.1| DUF88 [Ruegeria sp. R11]
Length = 189
Score = 204 bits (518), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 97/179 (54%), Positives = 136/179 (75%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + E +
Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS
Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F LV +LQR+ +V++VST+ S P M SD+LRRQAD F++L LK+ I R P E
Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELEELKDVIGRPPRE 177
>gi|254511909|ref|ZP_05123976.1| hypothetical protein RKLH11_2451 [Rhodobacteraceae bacterium KLH11]
gi|221535620|gb|EEE38608.1| hypothetical protein RKLH11_2451 [Rhodobacteraceae bacterium KLH11]
Length = 191
Score = 204 bits (518), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 96/179 (53%), Positives = 137/179 (76%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + E +
Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS
Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F L+A+LQR+ +V++VST+ S P M SD+LRRQAD F++L L++ I R P E
Sbjct: 119 GDGDFRPLIASLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELEDLRDVIGRPPRE 177
>gi|254465558|ref|ZP_05078969.1| hypothetical protein RBY4I_2165 [Rhodobacterales bacterium Y4I]
gi|206686466|gb|EDZ46948.1| hypothetical protein RBY4I_2165 [Rhodobacterales bacterium Y4I]
Length = 189
Score = 203 bits (517), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 96/179 (53%), Positives = 136/179 (75%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + E +
Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS
Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEYTDSLGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F L+A+LQR+ +V++VST+ S P M SD LRRQAD F++L L++ I R P E
Sbjct: 119 GDGDFRPLIASLQRQGVRVSVVSTIRSQPPMISDDLRRQADNFIELEELRDVIGRPPRE 177
>gi|126739732|ref|ZP_01755424.1| hypothetical protein RSK20926_05732 [Roseobacter sp. SK209-2-6]
gi|126719378|gb|EBA16088.1| hypothetical protein RSK20926_05732 [Roseobacter sp. SK209-2-6]
Length = 190
Score = 203 bits (516), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 95/180 (52%), Positives = 138/180 (76%), Gaps = 2/180 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA++K+LGFDIDY+ L + F R ++RA+YYT ++ + E +
Sbjct: 1 MFYKDERLALFIDGSNLYAAAKSLGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS
Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG F L+A+LQR+ +V++VST+ S P M SD+LRRQAD F++L LK+ I R P ++
Sbjct: 119 GDGDFRPLIASLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELEELKDVIGRPPRDN 178
>gi|84684017|ref|ZP_01011919.1| hypothetical protein 1099457000262_RB2654_16251 [Maritimibacter
alkaliphilus HTCC2654]
gi|84667770|gb|EAQ14238.1| hypothetical protein RB2654_16251 [Rhodobacterales bacterium
HTCC2654]
Length = 191
Score = 202 bits (515), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 96/181 (53%), Positives = 135/181 (74%), Gaps = 2/181 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA++K+LGFDIDY+ L + F R ++RA+YYT ++ + +
Sbjct: 1 MFYKDERLALFIDGSNLYAAAKSLGFDIDYKLLRQEFMRRGKLLRAFYYTALLEN--DDY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWLHYNGF +V K AKEFT++ GR++VK +MD+EL VDA E + ++H+V+FS
Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEFTDSMGRRKVKGNMDIELTVDAMEIAPHVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG F LV LQRK +V++VST+ S P M +D+LRRQAD F++L LK I R P +D
Sbjct: 119 GDGDFRPLVEGLQRKGVRVSVVSTIRSQPPMIADELRRQADNFIELDELKEVIGRPPRDD 178
Query: 181 K 181
+
Sbjct: 179 R 179
>gi|323139351|ref|ZP_08074403.1| protein of unknown function DUF88 [Methylocystis sp. ATCC 49242]
gi|322395417|gb|EFX97966.1| protein of unknown function DUF88 [Methylocystis sp. ATCC 49242]
Length = 215
Score = 202 bits (514), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 96/175 (54%), Positives = 131/175 (74%), Gaps = 2/175 (1%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
+E+IALFIDGANLY ++K FDIDYR+LL F R +IRA+YYT V+ D E FS +
Sbjct: 4 QERIALFIDGANLYQAAKTQSFDIDYRRLLSEFEQRGRLIRAFYYTAVIEDEE--FSSIR 61
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
PL+DWL YNG+ VV K AK F + G +++K +MDVELAVDA ++ ++H+ +FSGDG
Sbjct: 62 PLIDWLDYNGYAVVTKPAKAFVDATGHRKIKGNMDVELAVDAMGMADHIDHMWLFSGDGD 121
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
F +LVAA+QRK +V++VST+ + PSM +D+LRRQAD +DLA L ++I RDP+E
Sbjct: 122 FCSLVAAVQRKGVRVSVVSTITTRPSMLADELRRQADEVIDLADLADKIGRDPNE 176
>gi|83951635|ref|ZP_00960367.1| hypothetical protein ISM_13770 [Roseovarius nubinhibens ISM]
gi|83836641|gb|EAP75938.1| hypothetical protein ISM_13770 [Roseovarius nubinhibens ISM]
Length = 191
Score = 202 bits (513), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 97/177 (54%), Positives = 134/177 (75%), Gaps = 2/177 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA+ KALGFDIDY+ L F R ++RA+YYT ++ + E +
Sbjct: 1 MFYKDERLALFIDGSNLYAAGKALGFDIDYKLLRSEFMRRGKLLRAFYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+ELAVDA E + ++H+V+FS
Sbjct: 59 SPIRPLVDWLHYNGFSMVTKPAKEYTDSQGRRKVKGNMDIELAVDAMELAPHVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
GDG F LV +LQR+ +V++VST+ S P M SD+LRRQAD F++L LK+ I R P
Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELDDLKDVIGRPP 175
>gi|294678836|ref|YP_003579451.1| hypothetical protein RCAP_rcc03320 [Rhodobacter capsulatus SB 1003]
gi|294477656|gb|ADE87044.1| protein of unknown function DUF88 [Rhodobacter capsulatus SB 1003]
Length = 193
Score = 202 bits (513), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 95/182 (52%), Positives = 137/182 (75%), Gaps = 2/182 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + +++
Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFERRGKLVRAFYYTALLEN--EEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWLHYNG+ +V K AKE+T++ GR++VK +MD+ELAV+A E + L+H V+FS
Sbjct: 59 SPIRPLVDWLHYNGYAMVTKPAKEYTDSMGRRKVKGNMDIELAVNAMELAPRLDHAVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG F LV ALQR +V++VST+ S P M +D+LRRQAD F++L L+ I R P E
Sbjct: 119 GDGDFRPLVEALQRMGVRVSVVSTIRSQPPMIADELRRQADNFIELDALREVIGRPPREP 178
Query: 181 KK 182
++
Sbjct: 179 RE 180
>gi|126726103|ref|ZP_01741945.1| hypothetical protein RB2150_07843 [Rhodobacterales bacterium
HTCC2150]
gi|126705307|gb|EBA04398.1| hypothetical protein RB2150_07843 [Rhodobacterales bacterium
HTCC2150]
Length = 191
Score = 202 bits (513), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 94/179 (52%), Positives = 137/179 (76%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA++K+LGFDIDY+ L F R ++RA+YYT ++ + E +
Sbjct: 1 MFYRDERLALFIDGSNLYAAAKSLGFDIDYKLLRTEFMRRGKLLRAFYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS
Sbjct: 59 SPIRPLVDWLHYNGFNMVTKPAKEYTDSQGRRKVKGNMDIELTVDALELAPHVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F ++AA+QR+ +V++VST+ S+P M SD+LRRQAD F++L LK+ + R P E
Sbjct: 119 GDGDFRPMIAAVQRQGVRVSVVSTIRSNPPMISDELRRQADNFIELDELKDVVGRPPRE 177
>gi|85705102|ref|ZP_01036202.1| hypothetical protein ROS217_04305 [Roseovarius sp. 217]
gi|85670424|gb|EAQ25285.1| hypothetical protein ROS217_04305 [Roseovarius sp. 217]
Length = 190
Score = 202 bits (513), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 96/177 (54%), Positives = 134/177 (75%), Gaps = 2/177 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA+ KALGFDIDY+ L F R ++RA+YYT ++ + E +
Sbjct: 1 MFYKDERLALFIDGSNLYAAGKALGFDIDYKLLRSEFMRRGKLLRAFYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWLHYNG+ +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS
Sbjct: 59 SPIRPLVDWLHYNGYSMVTKPAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
GDG F LV +LQR+ +V++VST+ S P M SD+LRRQAD F++LA LK+ I R P
Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELADLKDVIGRPP 175
>gi|255263963|ref|ZP_05343305.1| hypothetical protein TR2A62_2961 [Thalassiobium sp. R2A62]
gi|255106298|gb|EET48972.1| hypothetical protein TR2A62_2961 [Thalassiobium sp. R2A62]
Length = 192
Score = 201 bits (512), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 96/179 (53%), Positives = 136/179 (75%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA++KALGFDIDY+ L F R ++RA+YYT ++ + E +
Sbjct: 1 MFYRDERLALFIDGSNLYAAAKALGFDIDYKLLRTEFMRRGKMLRAFYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWL+YNGF +V K AKEFT++ GR+++K +MD+ELAVDA E + ++H+VIFS
Sbjct: 59 SPIRPLVDWLNYNGFTMVTKPAKEFTDSIGRRKIKGNMDIELAVDAMELAPHVDHIVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F LV A+QRK +V++VST+ S P M +D+LRRQAD F++L L++ + R P E
Sbjct: 119 GDGDFRPLVEAIQRKGVRVSVVSTIRSQPPMIADELRRQADNFIELDELRDVVGRPPRE 177
>gi|89070109|ref|ZP_01157439.1| hypothetical protein OG2516_09048 [Oceanicola granulosus HTCC2516]
gi|89044330|gb|EAR50473.1| hypothetical protein OG2516_09048 [Oceanicola granulosus HTCC2516]
Length = 193
Score = 201 bits (511), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 95/181 (52%), Positives = 135/181 (74%), Gaps = 2/181 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA++K+LGFDIDY+ L + F R ++RA+YYT ++ + +
Sbjct: 1 MFYRDERLALFIDGSNLYAAAKSLGFDIDYKLLRQEFMRRGKLLRAFYYTALLEN--DDY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWLHYNGF +V K AKEFT++ GR++VK +MD+EL VDA E + ++H+V+FS
Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEFTDSQGRRKVKGNMDIELTVDAMEIASHVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG F LV ALQRK +V++ ST+ S P M +D+LRRQAD F++L L+ + R P ED
Sbjct: 119 GDGDFRPLVEALQRKGVRVSVCSTIRSQPPMIADELRRQADNFIELDELREVVGRPPRED 178
Query: 181 K 181
+
Sbjct: 179 R 179
>gi|126728513|ref|ZP_01744329.1| hypothetical protein SSE37_21022 [Sagittula stellata E-37]
gi|126711478|gb|EBA10528.1| hypothetical protein SSE37_21022 [Sagittula stellata E-37]
Length = 195
Score = 201 bits (511), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 95/181 (52%), Positives = 136/181 (75%), Gaps = 2/181 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + E +
Sbjct: 6 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFARRGKMVRAFYYTALLENDE--Y 63
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS
Sbjct: 64 SPIRPLVDWLHYNGFTMVTKPAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 123
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG F LV +LQR+ +V++VST+ S P M +D+LRRQAD F++L L+ I R P E
Sbjct: 124 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMIADELRRQADNFIELDELREVIGRPPREQ 183
Query: 181 K 181
+
Sbjct: 184 Q 184
>gi|84515155|ref|ZP_01002518.1| hypothetical protein SKA53_13063 [Loktanella vestfoldensis SKA53]
gi|84511314|gb|EAQ07768.1| hypothetical protein SKA53_13063 [Loktanella vestfoldensis SKA53]
Length = 187
Score = 201 bits (511), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 98/183 (53%), Positives = 138/183 (75%), Gaps = 5/183 (2%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA+++ALGFDIDY+ L + F R ++RA+YYT ++ + E +
Sbjct: 1 MFYRDERLALFIDGSNLYAAARALGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWLHYNG+ ++ K AKEFT++ GR++VK +MD+ELAVDA E + L+H VIFS
Sbjct: 59 SPIRPLVDWLHYNGYSMITKPAKEFTDSLGRRKVKGNMDIELAVDAMELTPYLDHAVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI---ARDP 177
GDG F L+ ALQRK +V++VST+ S P M +D+LRRQAD F++L L++ I AR+P
Sbjct: 119 GDGDFRPLIEALQRKGVRVSVVSTIRSQPPMIADELRRQADNFIELEELRDVIGRPAREP 178
Query: 178 DED 180
D
Sbjct: 179 RTD 181
>gi|260432747|ref|ZP_05786718.1| RtsE [Silicibacter lacuscaerulensis ITI-1157]
gi|260416575|gb|EEX09834.1| RtsE [Silicibacter lacuscaerulensis ITI-1157]
Length = 190
Score = 201 bits (510), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 95/179 (53%), Positives = 137/179 (76%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + E +
Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWL+YNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS
Sbjct: 59 SPIRPLVDWLNYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F L+A+LQR+ +V++VST+ S P M SD+LRRQAD F++L L++ I R P E
Sbjct: 119 GDGDFRPLIASLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELDDLRDVIGRPPRE 177
>gi|84500570|ref|ZP_00998819.1| hypothetical protein OB2597_11446 [Oceanicola batsensis HTCC2597]
gi|84391523|gb|EAQ03855.1| hypothetical protein OB2597_11446 [Oceanicola batsensis HTCC2597]
Length = 190
Score = 201 bits (510), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 95/179 (53%), Positives = 136/179 (75%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + E +
Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS
Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F LV +LQR+ +V++VST+ S P M +D+LRRQAD F++L L++ I R P E
Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMIADELRRQADNFIELDDLRDVIGRPPRE 177
>gi|260428353|ref|ZP_05782332.1| RtsE [Citreicella sp. SE45]
gi|260422845|gb|EEX16096.1| RtsE [Citreicella sp. SE45]
Length = 191
Score = 200 bits (509), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 95/181 (52%), Positives = 136/181 (75%), Gaps = 2/181 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + E +
Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFVRRGKMVRAFYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS
Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG F LV +LQR+ +V++VST+ S P M +D+LRRQAD F++L L+ I R P E
Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMIADELRRQADNFIELDELREVIGRPPREQ 178
Query: 181 K 181
+
Sbjct: 179 Q 179
>gi|83855035|ref|ZP_00948565.1| hypothetical protein NAS141_09906 [Sulfitobacter sp. NAS-14.1]
gi|83941558|ref|ZP_00954020.1| hypothetical protein EE36_04978 [Sulfitobacter sp. EE-36]
gi|83842878|gb|EAP82045.1| hypothetical protein NAS141_09906 [Sulfitobacter sp. NAS-14.1]
gi|83847378|gb|EAP85253.1| hypothetical protein EE36_04978 [Sulfitobacter sp. EE-36]
Length = 181
Score = 200 bits (509), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 96/179 (53%), Positives = 135/179 (75%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA++K LGFDIDY+ L + F R ++RA+YYT ++ + E +
Sbjct: 1 MFYKDERLALFIDGSNLYAAAKNLGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWL+YNGF +V K AKE+T++ GR++VK +MD+ELAVDA E + L+H+VIFS
Sbjct: 59 SPIRPLVDWLNYNGFSMVTKPAKEYTDSMGRRKVKGNMDIELAVDAMELAPHLDHIVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F LV +LQR+ +V++VST+ S P M SD+LRRQ D F++L L++ I R P E
Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMISDELRRQVDNFIELEDLRDVIGRPPRE 177
>gi|149200815|ref|ZP_01877790.1| hypothetical protein RTM1035_14357 [Roseovarius sp. TM1035]
gi|149145148|gb|EDM33174.1| hypothetical protein RTM1035_14357 [Roseovarius sp. TM1035]
Length = 190
Score = 200 bits (509), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 96/177 (54%), Positives = 133/177 (75%), Gaps = 2/177 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA+ KALGFDIDY+ L F R ++RA+YYT ++ + E +
Sbjct: 1 MFYKDERLALFIDGSNLYAAGKALGFDIDYKLLRSEFMRRGKLLRAFYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWLHYNG+ +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS
Sbjct: 59 SPIRPLVDWLHYNGYSMVTKPAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHVVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
GDG F LV +LQR+ +V++VST+ S P M SD LRRQAD F++LA LK+ I R P
Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMISDDLRRQADNFIELADLKDVIGRPP 175
>gi|163733871|ref|ZP_02141313.1| hypothetical protein RLO149_06148 [Roseobacter litoralis Och 149]
gi|161392982|gb|EDQ17309.1| hypothetical protein RLO149_06148 [Roseobacter litoralis Och 149]
Length = 182
Score = 200 bits (508), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 95/179 (53%), Positives = 136/179 (75%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA++K+LGFDIDY+ L + F R ++RA+YYT ++ + E +
Sbjct: 1 MFYKDERLALFIDGSNLYAAAKSLGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWL+YNGF +V K AKE+T++ GR++VK +MD+ELAVDA E + ++H+V+FS
Sbjct: 59 SPIRPLVDWLNYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELAVDAMELAPRVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F L+ +LQR +V++VST+ S P M SD+LRRQAD F++L LK+ I R P E
Sbjct: 119 GDGDFRPLIESLQRSGVRVSVVSTIRSQPPMISDELRRQADNFIELDELKDVIGRPPRE 177
>gi|254439991|ref|ZP_05053485.1| conserved hypothetical protein [Octadecabacter antarcticus 307]
gi|198255437|gb|EDY79751.1| conserved hypothetical protein [Octadecabacter antarcticus 307]
Length = 195
Score = 199 bits (507), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/175 (54%), Positives = 133/175 (76%), Gaps = 2/175 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF EK+ALFIDG+NLYAS+K+LGFDIDY+ L F R ++RAYYYT ++ + E +
Sbjct: 1 MFYRDEKLALFIDGSNLYASAKSLGFDIDYKLLRAEFMRRGKMLRAYYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWL+YNGF +V K AKEFT++ GR+++K +MD+ELAVDA E + ++H+VIFS
Sbjct: 59 SPIRPLVDWLNYNGFTMVTKPAKEFTDSMGRRKIKGNMDIELAVDALELAPHVDHIVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
GDG F LV +LQRK +V++VST+ S P M +D+LRRQ D F++L L++ I R
Sbjct: 119 GDGDFRPLVESLQRKGVRVSVVSTIRSQPPMIADELRRQCDNFIELDELRDVIGR 173
>gi|163744864|ref|ZP_02152224.1| hypothetical protein OIHEL45_04735 [Oceanibulbus indolifex HEL-45]
gi|161381682|gb|EDQ06091.1| hypothetical protein OIHEL45_04735 [Oceanibulbus indolifex HEL-45]
Length = 184
Score = 199 bits (506), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/177 (54%), Positives = 134/177 (75%), Gaps = 2/177 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + E +
Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWL+YNGF +V K AKE+T++ GR++VK MD+ELAVDA E + ++H+VIFS
Sbjct: 59 SPIRPLVDWLNYNGFSMVTKPAKEYTDSMGRRKVKGDMDIELAVDAMELAPRVDHIVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
GDG F LV +LQR+ +V++VST+ S P M SD LRRQAD F++L L++ I R P
Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMISDDLRRQADNFIELDDLRDVIGRPP 175
>gi|260576279|ref|ZP_05844271.1| protein of unknown function DUF88 [Rhodobacter sp. SW2]
gi|259021547|gb|EEW24851.1| protein of unknown function DUF88 [Rhodobacter sp. SW2]
Length = 190
Score = 199 bits (506), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 94/181 (51%), Positives = 137/181 (75%), Gaps = 2/181 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF +++ALFIDG+NLYA++KALGFDIDYR L + F R ++RA+YYT ++ + E +
Sbjct: 1 MFYKDDRLALFIDGSNLYAAAKALGFDIDYRLLRQEFMRRGKLLRAFYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL V+A E + ++H+V+FS
Sbjct: 59 SPIRPLVDWLHYNGFSMVTKPAKEYTDSQGRRKVKGNMDIELTVNAMELAPHVDHVVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG F LV +LQR+ +V++VST+ S P M +D+LRRQAD F++L L++ I R P E
Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMIADELRRQADNFIELDELRDVIGRPPREP 178
Query: 181 K 181
+
Sbjct: 179 R 179
>gi|146278613|ref|YP_001168772.1| hypothetical protein Rsph17025_2579 [Rhodobacter sphaeroides ATCC
17025]
gi|145556854|gb|ABP71467.1| protein of unknown function DUF88 [Rhodobacter sphaeroides ATCC
17025]
Length = 190
Score = 199 bits (506), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 94/181 (51%), Positives = 135/181 (74%), Gaps = 2/181 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + +
Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLEN--DDY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS
Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG F LV +LQR+ +V++VST+ S P M +D+LRRQAD F++L L+ I R P E
Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMIADELRRQADNFIELDELREVIGRPPREP 178
Query: 181 K 181
+
Sbjct: 179 R 179
>gi|77462212|ref|YP_351716.1| hypothetical protein RSP_1667 [Rhodobacter sphaeroides 2.4.1]
gi|126461074|ref|YP_001042188.1| hypothetical protein Rsph17029_0300 [Rhodobacter sphaeroides ATCC
17029]
gi|221641166|ref|YP_002527428.1| hypothetical protein RSKD131_3067 [Rhodobacter sphaeroides KD131]
gi|332560093|ref|ZP_08414415.1| hypothetical protein RSWS8N_13570 [Rhodobacter sphaeroides WS8N]
gi|77386630|gb|ABA77815.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1]
gi|126102738|gb|ABN75416.1| protein of unknown function DUF88 [Rhodobacter sphaeroides ATCC
17029]
gi|221161947|gb|ACM02927.1| Hypothetical Protein RSKD131_3067 [Rhodobacter sphaeroides KD131]
gi|332277805|gb|EGJ23120.1| hypothetical protein RSWS8N_13570 [Rhodobacter sphaeroides WS8N]
Length = 190
Score = 199 bits (506), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 94/181 (51%), Positives = 135/181 (74%), Gaps = 2/181 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + +
Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLEN--DDY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS
Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG F LV +LQR+ +V++VST+ S P M +D+LRRQAD F++L L+ I R P E
Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMIADELRRQADNFIELDELREVIGRPPREP 178
Query: 181 K 181
+
Sbjct: 179 R 179
>gi|209964804|ref|YP_002297719.1| hypothetical protein RC1_1502 [Rhodospirillum centenum SW]
gi|209958270|gb|ACI98906.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 233
Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 90/175 (51%), Positives = 133/175 (76%), Gaps = 2/175 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+F E++A+FIDGANLYA++++LGFDIDY++LL+ F R ++RA+YYT +V D Q++
Sbjct: 5 IFYQEERLAMFIDGANLYAAARSLGFDIDYKRLLELFAGRGRLVRAFYYTALVED--QEY 62
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWL YNG+ +V K KE+T+ GR+++K +MD+ELA+D E +E ++H+++FS
Sbjct: 63 SPIRPLVDWLDYNGYTMVTKPTKEYTDASGRRKIKGNMDIELAIDVMEMAEHVDHILLFS 122
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
GDG F LV A+QRK +VT++STV S P M +D+LRRQAD F++L L I R
Sbjct: 123 GDGDFRRLVEAVQRKGVRVTVISTVRSTPPMVADELRRQADNFLELQDLSPNIMR 177
>gi|110678677|ref|YP_681684.1| hypothetical protein RD1_1356 [Roseobacter denitrificans OCh 114]
gi|109454793|gb|ABG30998.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114]
Length = 182
Score = 199 bits (505), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 94/179 (52%), Positives = 135/179 (75%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA++K+LGFDIDY+ L + F R ++RA+YYT ++ + E +
Sbjct: 1 MFYKDERLALFIDGSNLYAAAKSLGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWL+YNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS
Sbjct: 59 SPIRPLVDWLNYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F L+ +LQR +V++VST+ S P M SD+LRRQAD F++L LK+ I R P E
Sbjct: 119 GDGDFRPLIESLQRSGVRVSVVSTIRSQPPMISDELRRQADNFIELDELKDVIGRPPRE 177
>gi|83311350|ref|YP_421614.1| hypothetical protein amb2251 [Magnetospirillum magneticum AMB-1]
gi|82946191|dbj|BAE51055.1| Uncharacterized conserved protein [Magnetospirillum magneticum
AMB-1]
Length = 187
Score = 198 bits (504), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 90/170 (52%), Positives = 132/170 (77%), Gaps = 2/170 (1%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
E++ LFIDG+NLY++++ALGFDIDY+KLL F + +IRA+YYT ++ D Q++SP+ P
Sbjct: 7 ERLGLFIDGSNLYSAARALGFDIDYKKLLNLFAGKGRLIRAFYYTALMED--QEYSPIRP 64
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
L+DWL YNG+ +V K KEFT+ GR+++K +MD+ELA+D E + L+H+V+FSGDG F
Sbjct: 65 LVDWLDYNGYTMVTKPTKEFTDAMGRRKIKGNMDIELAIDVMEMCQYLDHVVLFSGDGDF 124
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
LV A+QRK +V++VST+ S P M +D+LRRQAD F++L L+++IAR
Sbjct: 125 RRLVEAVQRKGVRVSVVSTIRSQPPMVADELRRQADVFIELQDLESQIAR 174
>gi|83858189|ref|ZP_00951711.1| hypothetical protein OA2633_01781 [Oceanicaulis alexandrii
HTCC2633]
gi|83853012|gb|EAP90864.1| hypothetical protein OA2633_01781 [Oceanicaulis alexandrii
HTCC2633]
Length = 190
Score = 198 bits (504), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 90/175 (51%), Positives = 132/175 (75%), Gaps = 2/175 (1%)
Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
F P EK+ LFIDGANLY++++ L FDIDY++LL+ FR R +IRA YYT ++ ++++
Sbjct: 3 FYPNEKLGLFIDGANLYSAARNLDFDIDYKRLLEEFRKRGRLIRANYYTALI--ESEEYT 60
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
P+ PL+DWL YNGF+V+ K AKE+T++ GR+R+K MDV+LA+D E ++ L+H+V+FSG
Sbjct: 61 PIRPLIDWLDYNGFKVITKAAKEYTDDSGRRRIKGDMDVDLAIDVMEAADYLDHIVLFSG 120
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
DG F +V A+QRK +V++VST+ S P MA+D LRRQAD F++L L + R+
Sbjct: 121 DGDFKKVVEAVQRKGVRVSVVSTLKSSPPMAADDLRRQADTFIELQDLGKLVGRE 175
>gi|254453678|ref|ZP_05067115.1| DUF88 [Octadecabacter antarcticus 238]
gi|198268084|gb|EDY92354.1| DUF88 [Octadecabacter antarcticus 238]
Length = 194
Score = 198 bits (504), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 95/175 (54%), Positives = 133/175 (76%), Gaps = 2/175 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF EK+ALFIDG+NLYA++KALGFDIDY+ L F R ++RA+YYT ++ + E +
Sbjct: 1 MFYRDEKLALFIDGSNLYAAAKALGFDIDYKLLRSEFMRRGKMLRAFYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWL+YNGF +V K AKEFT++ GR+++K +MD+ELAVDA E + ++H+VIFS
Sbjct: 59 SPIRPLVDWLNYNGFTMVTKPAKEFTDSMGRRKIKGNMDIELAVDALELAPHVDHIVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
GDG F LV +LQRK +V++VST+ S P M +D+LRRQ D F++L L++ I R
Sbjct: 119 GDGDFRPLVESLQRKGVRVSVVSTIRSQPPMIADELRRQCDNFIELDELRDVIGR 173
>gi|254460504|ref|ZP_05073920.1| hypothetical protein RB2083_1094 [Rhodobacterales bacterium
HTCC2083]
gi|206677093|gb|EDZ41580.1| hypothetical protein RB2083_1094 [Rhodobacteraceae bacterium
HTCC2083]
Length = 190
Score = 197 bits (501), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 95/179 (53%), Positives = 134/179 (74%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG NLYA++KALGFDIDY+ L F R ++RA+YYT ++ + E +
Sbjct: 1 MFYKDERLALFIDGLNLYAAAKALGFDIDYKLLRTEFMRRGKMLRAFYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWL+YNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS
Sbjct: 59 SPIRPLVDWLNYNGFTMVTKQAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F LV +LQR+ +V++VST+ S P M SD+LRRQAD F++L LK+ + R P E
Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELDELKDVLGRPPRE 177
>gi|46201864|ref|ZP_00208280.1| COG1432: Uncharacterized conserved protein [Magnetospirillum
magnetotacticum MS-1]
Length = 187
Score = 197 bits (501), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 89/170 (52%), Positives = 132/170 (77%), Gaps = 2/170 (1%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
E++ LFIDG+NLY+++++LGFDIDY+KLL F + +IRA+YYT ++ D Q++SP+ P
Sbjct: 7 ERLGLFIDGSNLYSAARSLGFDIDYKKLLNLFAGKGRLIRAFYYTALMED--QEYSPIRP 64
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
L+DWL YNG+ +V K KEFT+ GR+++K +MD+ELA+D E + L+H+V+FSGDG F
Sbjct: 65 LVDWLDYNGYTMVTKPTKEFTDAMGRRKIKGNMDIELAIDVMEMCQYLDHVVLFSGDGDF 124
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
LV A+QRK +V++VST+ S P M +D+LRRQAD F++L L+++IAR
Sbjct: 125 RRLVEAVQRKGVRVSVVSTIRSQPPMVADELRRQADVFIELQDLESQIAR 174
>gi|254487193|ref|ZP_05100398.1| DUF88 [Roseobacter sp. GAI101]
gi|214044062|gb|EEB84700.1| DUF88 [Roseobacter sp. GAI101]
Length = 181
Score = 197 bits (500), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 93/175 (53%), Positives = 134/175 (76%), Gaps = 2/175 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA++K+LGFDIDY+ L + F R ++RA+YYT ++ + +++
Sbjct: 1 MFYKDERLALFIDGSNLYAAAKSLGFDIDYKLLRQEFMRRGKLLRAFYYTALLEN--EEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWL+YNGF +V K AKE+T++ GR++VK +MD+ELAVDA E + L+H+VIFS
Sbjct: 59 SPIRPLVDWLNYNGFSMVTKPAKEYTDSMGRRKVKGNMDIELAVDAMELAPHLDHIVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
GDG F LV +LQR+ +V++VST+ S P M SD LRRQ D F++L L++ I R
Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMISDDLRRQVDNFIELEDLRDVIGR 173
>gi|149913459|ref|ZP_01901992.1| hypothetical protein RAZWK3B_09161 [Roseobacter sp. AzwK-3b]
gi|149812579|gb|EDM72408.1| hypothetical protein RAZWK3B_09161 [Roseobacter sp. AzwK-3b]
Length = 190
Score = 197 bits (500), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 94/177 (53%), Positives = 134/177 (75%), Gaps = 2/177 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA+++ALGFDIDY+ L F R ++RA+YYT ++ + E +
Sbjct: 1 MFYKDERLALFIDGSNLYAAARALGFDIDYKLLRAEFMRRGKLLRAFYYTAMLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWL+YNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS
Sbjct: 59 SPIRPLVDWLNYNGFSMVTKPAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
GDG F LV +LQR+ +V++VST+ S P M SD+LRRQAD F++L LK+ I R P
Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELDDLKDVIGRPP 175
>gi|148259544|ref|YP_001233671.1| hypothetical protein Acry_0528 [Acidiphilium cryptum JF-5]
gi|326402750|ref|YP_004282831.1| hypothetical protein ACMV_06020 [Acidiphilium multivorum AIU301]
gi|146401225|gb|ABQ29752.1| protein of unknown function DUF88 [Acidiphilium cryptum JF-5]
gi|325049611|dbj|BAJ79949.1| hypothetical protein ACMV_06020 [Acidiphilium multivorum AIU301]
Length = 190
Score = 197 bits (500), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 92/178 (51%), Positives = 131/178 (73%), Gaps = 3/178 (1%)
Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
P+EK ALFIDGANLYA+S+ALGFD+DYR+LL F R ++RAYYY+ ++ +++SPL
Sbjct: 5 PQEKTALFIDGANLYAASRALGFDVDYRRLLDFF-DRVNLVRAYYYSALLD--TEEYSPL 61
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
PL DWL YNG+ +V K AKEFT+ GR+RVK +MD+ELA+D E + ++H ++FSGD
Sbjct: 62 KPLTDWLAYNGYTLVTKPAKEFTDGAGRRRVKGNMDIELAIDMLEMAPHIDHAILFSGDS 121
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
F LV A+QR+ +V+++ST+ + P M +D+LRRQ+D F+DLA + NE R E +
Sbjct: 122 DFRRLVEAVQRRGVRVSVISTIKTSPPMIADELRRQSDQFVDLADIANEFTRRQTEPR 179
>gi|119384144|ref|YP_915200.1| hypothetical protein Pden_1403 [Paracoccus denitrificans PD1222]
gi|119373911|gb|ABL69504.1| protein of unknown function DUF88 [Paracoccus denitrificans PD1222]
Length = 183
Score = 197 bits (500), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 93/179 (51%), Positives = 134/179 (74%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF +++ALFIDG+NLYA++K+LGFDIDY+ L + F R +IRAYYYT ++ + + +
Sbjct: 1 MFYKDDRLALFIDGSNLYAAAKSLGFDIDYKLLRQEFERRGKLIRAYYYTALLEN--EDY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWLHYNG+ +V K A+E+T+ GR++VK +MDVEL ++A E + L+H V+FS
Sbjct: 59 SPIRPLVDWLHYNGYSMVTKPAREYTDALGRRKVKGNMDVELVINAMELAPRLDHAVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F LV ALQR+ +V++VST+ S P M +D+LRRQAD F++L L++ I R P E
Sbjct: 119 GDGDFRPLVEALQRQGVRVSVVSTMRSQPPMIADELRRQADNFIELDALRDIIGRPPRE 177
>gi|114327650|ref|YP_744807.1| putative cytoplasmic protein [Granulibacter bethesdensis CGDNIH1]
gi|114315824|gb|ABI61884.1| hypothetical cytosolic protein [Granulibacter bethesdensis CGDNIH1]
Length = 195
Score = 196 bits (498), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 89/166 (53%), Positives = 128/166 (77%), Gaps = 2/166 (1%)
Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
F P E+IALFIDGANLY++S+ LGF++DYR LL FRSR+ ++RAYYY+ V+ +++S
Sbjct: 3 FLPTERIALFIDGANLYSASRNLGFEVDYRNLLSTFRSRSQLVRAYYYSAVL--ETEEYS 60
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
PL PL DWL YNG+ +V K A+EFT++ GR+R+K +MD+ELAVD E ++ ++H V+FSG
Sbjct: 61 PLKPLTDWLAYNGYNLVTKPAREFTDSSGRRRIKGNMDIELAVDMMEIADRIDHAVLFSG 120
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
D F +V A+QRK +V++VS++ + P M +D LRRQAD F++LA
Sbjct: 121 DADFRRVVEAVQRKGVRVSVVSSIRTSPPMIADDLRRQADEFLELA 166
>gi|114770098|ref|ZP_01447636.1| hypothetical protein OM2255_10695 [alpha proteobacterium HTCC2255]
gi|114548935|gb|EAU51818.1| hypothetical protein OM2255_10695 [alpha proteobacterium HTCC2255]
Length = 174
Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 90/171 (52%), Positives = 131/171 (76%), Gaps = 2/171 (1%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
E+ ALFIDG+NL+AS+KAL +IDY+KL F R ++RAYYYT ++ + E SPL P
Sbjct: 6 ERTALFIDGSNLHASAKALNLEIDYKKLKNEFIKRGKLLRAYYYTALIENEEN--SPLRP 63
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
L+DWL YNG+ +V+K AKEFT++ G+KR+K +MD+ELA+DA E + +EH++IFSGDG F
Sbjct: 64 LVDWLTYNGYTIVSKPAKEFTDSAGQKRIKGNMDIELAIDAMELAPNVEHIIIFSGDGDF 123
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
+LV +LQR+ +V++VST S P M +D+LRRQAD ++DL L++ I+++
Sbjct: 124 QSLVKSLQRQGVRVSVVSTTRSHPPMIADELRRQADNYIDLEELRDVISQN 174
>gi|159042747|ref|YP_001531541.1| hypothetical protein Dshi_0191 [Dinoroseobacter shibae DFL 12]
gi|157910507|gb|ABV91940.1| protein of unknown function DUF88 [Dinoroseobacter shibae DFL 12]
Length = 190
Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 93/174 (53%), Positives = 132/174 (75%), Gaps = 2/174 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF +++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + E +
Sbjct: 1 MFYKDDRLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+ELAVDA E + ++H V+FS
Sbjct: 59 SPIRPLVDWLHYNGFSMVTKPAKEYTDSQGRRKVKGNMDIELAVDAMELAPHMDHAVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
GDG F L+ +LQR+ +V++VST+ S P M SD+LRRQAD F++L LK I
Sbjct: 119 GDGDFRPLIESLQRRGVRVSVVSTIRSHPPMISDELRRQADNFIELDELKEIIG 172
>gi|126733749|ref|ZP_01749496.1| hypothetical protein RCCS2_06319 [Roseobacter sp. CCS2]
gi|126716615|gb|EBA13479.1| hypothetical protein RCCS2_06319 [Roseobacter sp. CCS2]
Length = 193
Score = 195 bits (495), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 93/181 (51%), Positives = 137/181 (75%), Gaps = 2/181 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA++K+LGFDIDY+ L + F R ++RA+YYT ++ + E +
Sbjct: 1 MFYRDERLALFIDGSNLYAAAKSLGFDIDYKLLRQEFMRRGKMLRAFYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWL+YNGF +V K AKE+T++ GR++VK +MD+ELAVDA E + ++H+V+FS
Sbjct: 59 SPIRPLVDWLNYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELAVDAMELAPYVDHVVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG F LV +LQRK +V++VST+ S P M +D+LRRQAD F++L L++ + R E
Sbjct: 119 GDGDFRPLVESLQRKGVRVSVVSTIRSQPPMIADELRRQADNFIELDELRDVVGRPTREP 178
Query: 181 K 181
+
Sbjct: 179 R 179
>gi|288958017|ref|YP_003448358.1| hypothetical protein AZL_011760 [Azospirillum sp. B510]
gi|288910325|dbj|BAI71814.1| hypothetical protein AZL_011760 [Azospirillum sp. B510]
Length = 200
Score = 194 bits (493), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 90/175 (51%), Positives = 130/175 (74%), Gaps = 2/175 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDGANLYA++++LGFDIDY++L F ++RA+YYT +V D Q++
Sbjct: 1 MFYKEERLALFIDGANLYAAARSLGFDIDYKRLRDGFAGEGRLVRAFYYTALVED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWL YNG+ +V K KEFT+ GR+++K +MD+ELA+D E ++ ++H+++FS
Sbjct: 59 SPIRPLVDWLDYNGYTMVTKPTKEFTDASGRRKIKGNMDIELAIDVMEMADHVDHILLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
GDG F LV A+QRK + ++VSTV S P M +D+LRRQAD F++L L IAR
Sbjct: 119 GDGDFRRLVEAVQRKGVRFSVVSTVRSQPPMVADELRRQADNFIELQELAPFIAR 173
>gi|239787551|emb|CAX84020.1| conserved uncharacterized protein [uncultured bacterium]
Length = 206
Score = 194 bits (492), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 97/175 (55%), Positives = 136/175 (77%), Gaps = 2/175 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+F P+E++ALFIDG+NLYA+++ALGFDIDY++LL+ F + +IRA+YYT +V D Q++
Sbjct: 2 VFYPQERVALFIDGSNLYAAARALGFDIDYKRLLQMFAGKGRLIRAFYYTALVED--QEY 59
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWL YNG+ +V K KEFT+ GR+++K +MD+ELA+D E SE L+H+V+FS
Sbjct: 60 SPIRPLVDWLDYNGYTMVTKPTKEFTDASGRRKIKGNMDIELAIDVMEMSEHLDHIVLFS 119
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
GDG F LV A+QRK +VT+VSTV S P M +D+LRRQAD F++L L+ I R
Sbjct: 120 GDGDFRRLVDAVQRKGVRVTVVSTVRSQPPMVADELRRQADNFVELQDLQPSIER 174
>gi|89053002|ref|YP_508453.1| hypothetical protein Jann_0511 [Jannaschia sp. CCS1]
gi|88862551|gb|ABD53428.1| protein of unknown function DUF88 [Jannaschia sp. CCS1]
Length = 191
Score = 192 bits (489), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 94/174 (54%), Positives = 128/174 (73%), Gaps = 2/174 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA++KALGFDIDY+ L F R ++RA YYT ++ + + +
Sbjct: 1 MFYRDERLALFIDGSNLYAAAKALGFDIDYKLLRSEFMQRGKLLRANYYTALLENDD--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWLHYNGF +V K AKEF ++ GR++VK +MD+ELAVDA E + ++H+VIFS
Sbjct: 59 SPIRPLVDWLHYNGFNMVTKPAKEFVDSQGRRKVKGNMDIELAVDAMETAPHVDHIVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
GDG F LV +LQRK +V++VST+ S P M +D LRRQ D F++L LK I
Sbjct: 119 GDGDFRPLVESLQRKGCRVSVVSTIRSQPPMIADDLRRQCDNFIELLDLKEAIG 172
>gi|254293927|ref|YP_003059950.1| hypothetical protein Hbal_1565 [Hirschia baltica ATCC 49814]
gi|254042458|gb|ACT59253.1| protein of unknown function DUF88 [Hirschia baltica ATCC 49814]
Length = 184
Score = 189 bits (480), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 89/170 (52%), Positives = 123/170 (72%), Gaps = 2/170 (1%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
E+IALFIDGANLY+++K L ++DYR+LL FR + ++RAYYYT ++ +++SP+ P
Sbjct: 7 ERIALFIDGANLYSAAKTLNVELDYRRLLSEFRKKGRLLRAYYYTALI--ENEEYSPIRP 64
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
L+DWL YNG+ VV K AKEFT+ GR+RVK MDVE+AVD ++ L+H ++FSGDG
Sbjct: 65 LVDWLQYNGYNVVTKPAKEFTDAAGRRRVKGDMDVEIAVDMLTLADKLDHAILFSGDGDL 124
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
T LV ALQ + +V++VS+V + P M SD LRR AD F+DL+ L I R
Sbjct: 125 TVLVKALQNRGLRVSVVSSVKTQPPMISDDLRRSADNFIDLSDLVKIIGR 174
>gi|310815107|ref|YP_003963071.1| hypothetical protein EIO_0609 [Ketogulonicigenium vulgare Y25]
gi|308753842|gb|ADO41771.1| conserved hypothetical protein [Ketogulonicigenium vulgare Y25]
Length = 196
Score = 185 bits (470), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/182 (52%), Positives = 134/182 (73%), Gaps = 2/182 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E+IALFIDGANLYA+SK+LGFDIDY+ L F R +IRA+YYT ++ + +++
Sbjct: 1 MFYRDERIALFIDGANLYAASKSLGFDIDYKLLRSEFMRRGRLIRAFYYTALLEN--EEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWLHYNGF + K AKEF + GR+++K +MD+EL VDA E + ++H+V+FS
Sbjct: 59 SPIRPLVDWLHYNGFSMRTKPAKEFQDAQGRRKIKGNMDIELTVDAMELAPHVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG F L+ ALQR+ +V++VSTV S P M +D+LRRQAD F++L L++ + R P D
Sbjct: 119 GDGDFRPLIEALQRRGVRVSVVSTVRSQPPMIADELRRQADNFIELDELRDVLGRPPRPD 178
Query: 181 KK 182
+
Sbjct: 179 AR 180
>gi|144899867|emb|CAM76731.1| protein containing DUF88 [Magnetospirillum gryphiswaldense MSR-1]
Length = 193
Score = 184 bits (468), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 93/170 (54%), Positives = 131/170 (77%), Gaps = 2/170 (1%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
E++ LFIDG+NLYA++KALGFDIDY++LL F ++ +IRA+YYT +V D Q++SP+ P
Sbjct: 12 ERVGLFIDGSNLYAAAKALGFDIDYKRLLDHFATKGRLIRAFYYTALVED--QEYSPIRP 69
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
L+DWL YNG+ +V K KEFT+ GR+++K +MD+ELA+D E + L+H+V+FSGDG F
Sbjct: 70 LVDWLDYNGYTMVTKPTKEFTDAAGRRKIKGNMDIELAIDVMEMAPHLDHVVLFSGDGDF 129
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
LV A+QRK +VT+VSTV S P M +D+LRRQAD F++L L++ I R
Sbjct: 130 RRLVEAIQRKGVRVTVVSTVRSQPPMVADELRRQADSFLELLDLESIIGR 179
>gi|114800400|ref|YP_759598.1| hypothetical protein HNE_0871 [Hyphomonas neptunium ATCC 15444]
gi|114740574|gb|ABI78699.1| conserved hypothetical protein [Hyphomonas neptunium ATCC 15444]
Length = 189
Score = 184 bits (466), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 127/170 (74%), Gaps = 2/170 (1%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
E++ALFIDGANLY++++A+G +ID+RKLLK F+SR ++RA YYT +V ++SP+ P
Sbjct: 7 ERLALFIDGANLYSAARAVGLEIDFRKLLKEFQSRGRLVRASYYTALV--ESDEYSPIRP 64
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
L+DWL YNGF VV K A+EF + GRKRV+ +MDVELAVD E + +H+V+FSG+G F
Sbjct: 65 LVDWLAYNGFNVVKKPAREFVDREGRKRVRGNMDVELAVDMLEAAAYCDHIVLFSGNGDF 124
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
LV A++ + +V++VST+ + P M SD LRR+AD F++L L + +AR
Sbjct: 125 RRLVEAVKARGVRVSVVSTMNATPPMISDDLRREADTFIELTDLGDLVAR 174
>gi|304321225|ref|YP_003854868.1| hypothetical protein PB2503_08354 [Parvularcula bermudensis
HTCC2503]
gi|303300127|gb|ADM09726.1| hypothetical protein PB2503_08354 [Parvularcula bermudensis
HTCC2503]
Length = 206
Score = 184 bits (466), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 84/174 (48%), Positives = 125/174 (71%)
Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
DP +K A+FIDGANLY +++ LGFDIDY++LL+ R+ ++RAYYYT + + EQ +S
Sbjct: 3 LDPDDKTAIFIDGANLYKTARNLGFDIDYKRLLQKTRAETRLVRAYYYTAMPEEREQDYS 62
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
PL PL+DWL YNG+ ++ K A+EFT++ GRKR + S+D++LA+D E ++ ++ LV+F+G
Sbjct: 63 PLRPLVDWLDYNGYTMMTKAAREFTDSQGRKRFRGSVDIDLALDFVEMADKVDCLVLFTG 122
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
+G F +A Q + +V VST + P MASD +RRQAD F+DL L++ I R
Sbjct: 123 NGDFRPAIAKAQSRGCRVICVSTTATQPPMASDDIRRQADQFVDLTSLEDVIGR 176
>gi|209542561|ref|YP_002274790.1| hypothetical protein Gdia_0379 [Gluconacetobacter diazotrophicus
PAl 5]
gi|209530238|gb|ACI50175.1| protein of unknown function DUF88 [Gluconacetobacter diazotrophicus
PAl 5]
Length = 203
Score = 184 bits (466), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 83/174 (47%), Positives = 125/174 (71%), Gaps = 2/174 (1%)
Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
F P E++ LFIDGA+LY++S+ LGFD+DYR LL FRS+ VIRAYYY+ ++ +++S
Sbjct: 3 FQPNERVCLFIDGASLYSASRHLGFDVDYRNLLTFFRSKCHVIRAYYYSAIL--ESEEYS 60
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
PL PL DWL YNG+ +V K A+EF ++ GR+RVK +MD+ELAVD E + ++H V+FSG
Sbjct: 61 PLKPLTDWLVYNGYFLVTKTAREFVDHNGRRRVKGNMDIELAVDMMEMAPRIDHAVLFSG 120
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
D F L+ +QR+ + +++S++ + P + D+LRRQAD F++LA + + R
Sbjct: 121 DADFRRLLETVQRQGVRTSVISSIRTSPPLIGDELRRQADQFIELADIAPQFTR 174
>gi|162147943|ref|YP_001602404.1| hypothetical protein GDI_2159 [Gluconacetobacter diazotrophicus PAl
5]
gi|161786520|emb|CAP56102.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
PAl 5]
Length = 210
Score = 183 bits (465), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 83/174 (47%), Positives = 125/174 (71%), Gaps = 2/174 (1%)
Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
F P E++ LFIDGA+LY++S+ LGFD+DYR LL FRS+ VIRAYYY+ ++ +++S
Sbjct: 10 FQPNERVCLFIDGASLYSASRHLGFDVDYRNLLTFFRSKCHVIRAYYYSAIL--ESEEYS 67
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
PL PL DWL YNG+ +V K A+EF ++ GR+RVK +MD+ELAVD E + ++H V+FSG
Sbjct: 68 PLKPLTDWLVYNGYFLVTKTAREFVDHNGRRRVKGNMDIELAVDMMEMAPRIDHAVLFSG 127
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
D F L+ +QR+ + +++S++ + P + D+LRRQAD F++LA + + R
Sbjct: 128 DADFRRLLETVQRQGVRTSVISSIRTSPPLIGDELRRQADQFIELADIAPQFTR 181
>gi|296115034|ref|ZP_06833676.1| hypothetical protein GXY_04609 [Gluconacetobacter hansenii ATCC
23769]
gi|295978371|gb|EFG85107.1| hypothetical protein GXY_04609 [Gluconacetobacter hansenii ATCC
23769]
Length = 204
Score = 183 bits (464), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 83/180 (46%), Positives = 131/180 (72%), Gaps = 2/180 (1%)
Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
F P+E++ LFIDG +LY++S+ LGF++DYRKLL FRS++ V+RAYYY+ V+ +++S
Sbjct: 3 FQPQERLCLFIDGTSLYSASRNLGFEVDYRKLLSFFRSKSNVLRAYYYSAVLE--TEEYS 60
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
PL PL DWL YNG+ +V K A+E+T++ GR+RVK +MD+ELAVD E + ++H V+FSG
Sbjct: 61 PLKPLTDWLVYNGYFLVTKTAREYTDHTGRRRVKGNMDIELAVDMLEMAPRIDHAVLFSG 120
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
D L+ A+QR+ + T+++++ + P + D+LRRQAD F++LA + + R E++
Sbjct: 121 DADSRRLLEAVQRQGVRTTVIASIKTSPPLIGDELRRQADQFIELADIASHFTRRQIENR 180
>gi|114570128|ref|YP_756808.1| hypothetical protein Mmar10_1578 [Maricaulis maris MCS10]
gi|114340590|gb|ABI65870.1| protein of unknown function DUF88 [Maricaulis maris MCS10]
Length = 179
Score = 182 bits (462), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/176 (49%), Positives = 130/176 (73%), Gaps = 2/176 (1%)
Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
F P E+I LFIDGANL++++KAL FDID+++LL+ FR R +IRA YYT ++ ++++
Sbjct: 3 FYPDERIGLFIDGANLFSTTKALDFDIDFKRLLEEFRKRGKLIRANYYTALL--EHEEYN 60
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
PL PL+DWL YNGF V+ K AKE+T++ GR+R+K MD+ELAVD E + L+H+++F+G
Sbjct: 61 PLRPLVDWLDYNGFSVITKPAKEYTDDHGRRRIKGDMDIELAVDMLEAATYLDHIILFTG 120
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
DG F +AA + K ++++VS++ + PSM SD LRR+AD F++L L+ I R P
Sbjct: 121 DGDFRYALAAARAKGARISVVSSLKTSPSMISDDLRREADAFIELDDLRAMIGRAP 176
>gi|117925174|ref|YP_865791.1| hypothetical protein Mmc1_1877 [Magnetococcus sp. MC-1]
gi|117608930|gb|ABK44385.1| protein of unknown function DUF88 [Magnetococcus sp. MC-1]
Length = 194
Score = 181 bits (458), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 87/177 (49%), Positives = 130/177 (73%), Gaps = 3/177 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+F E++ +FIDG+NLYA+ ++LGFD DY+KLL+ FRS+A +IRAYY+T + GD +Q++
Sbjct: 10 IFRQDERVMVFIDGSNLYAAIRSLGFDFDYKKLLRYFRSQANLIRAYYFTAL-GD-DQEY 67
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119
SP+ PL+DWL YNG+ VV K KE+ + G KR K +MD+E+AVD + + +H V+F
Sbjct: 68 SPIRPLVDWLAYNGYAVVTKPIKEYVDPVTGHKRTKGNMDIEIAVDMMKLAPYYDHAVLF 127
Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
SGDG F ++V Q + K VT+VS++++ P M +D+LRRQADYF++L +K + RD
Sbjct: 128 SGDGDFRSVVEVAQGQGKVVTVVSSLMTQPPMIADELRRQADYFIELNRIKEHLQRD 184
>gi|330993366|ref|ZP_08317301.1| hypothetical protein SXCC_03264 [Gluconacetobacter sp. SXCC-1]
gi|329759396|gb|EGG75905.1| hypothetical protein SXCC_03264 [Gluconacetobacter sp. SXCC-1]
Length = 202
Score = 179 bits (455), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 126/174 (72%), Gaps = 2/174 (1%)
Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
F P+E++ LFIDG +LY++S+ LGF++DYRKLL+ FR+++ V+RAYYY+ V+ +++S
Sbjct: 3 FQPQERLCLFIDGTSLYSASRNLGFEVDYRKLLQFFRAKSNVLRAYYYSAVLD--TEEYS 60
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
PL PL DWL YNG+ +V K A+EF ++ GR+RV+ +MDVEL VD E + ++H V+FSG
Sbjct: 61 PLKPLTDWLVYNGYTLVTKNAREFIDHNGRRRVRGNMDVELTVDMMEMAPHIDHAVLFSG 120
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
D F L+ ++QR+ + T+V ++ + P + D+LRRQAD F++LA + R
Sbjct: 121 DSDFRRLLESVQRQGVRTTVVGSIKTTPPLIGDELRRQADQFIELADISANFMR 174
>gi|258541738|ref|YP_003187171.1| hypothetical protein APA01_06420 [Acetobacter pasteurianus IFO
3283-01]
gi|256632816|dbj|BAH98791.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01]
gi|256635873|dbj|BAI01842.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03]
gi|256638928|dbj|BAI04890.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07]
gi|256641982|dbj|BAI07937.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22]
gi|256645037|dbj|BAI10985.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26]
gi|256648092|dbj|BAI14033.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32]
gi|256651145|dbj|BAI17079.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256654136|dbj|BAI20063.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12]
Length = 207
Score = 178 bits (452), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 125/177 (70%), Gaps = 2/177 (1%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
EK LFIDG++LY++S++LGFD+DY+KLL F ++ +IRAYYY ++ + +SPL P
Sbjct: 7 EKTCLFIDGSSLYSTSRSLGFDVDYKKLLDFFAAKTHIIRAYYYAAILD--TEDYSPLKP 64
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
L DWL YNG+ +V K A+EFT++ G++RVK +MD+E+AVD E + ++H ++FSGD F
Sbjct: 65 LTDWLSYNGYFLVTKPAREFTDSTGKRRVKGNMDIEIAVDMMEMAPHIDHAILFSGDSDF 124
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182
+V A+QR+ +V++VS++ S P + D LRRQAD F++L+ L R E+ +
Sbjct: 125 RRVVEAVQRQGTRVSVVSSMRSTPPLIGDDLRRQADQFLELSALAGNFTRRQTENPR 181
>gi|329114476|ref|ZP_08243238.1| Hypothetical protein APO_1273 [Acetobacter pomorum DM001]
gi|326696552|gb|EGE48231.1| Hypothetical protein APO_1273 [Acetobacter pomorum DM001]
Length = 207
Score = 178 bits (452), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 125/177 (70%), Gaps = 2/177 (1%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
EK LFIDG++LY++S++LGFD+DY+KLL F ++ +IRAYYY ++ + +SPL P
Sbjct: 7 EKTCLFIDGSSLYSTSRSLGFDVDYKKLLDFFAAKTHIIRAYYYAAILD--TEDYSPLKP 64
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
L DWL YNG+ +V K A+EFT++ G++RVK +MD+E+AVD E + ++H ++FSGD F
Sbjct: 65 LTDWLSYNGYFLVTKPAREFTDSTGKRRVKGNMDIEIAVDMLEMAPHIDHAILFSGDSDF 124
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182
+V A+QR+ +V++VS++ S P + D LRRQAD F++L+ L R E+ +
Sbjct: 125 RRVVEAVQRQGTRVSVVSSMRSTPPLIGDDLRRQADQFLELSALAGNFTRRQTENPR 181
>gi|329890088|ref|ZP_08268431.1| hypothetical protein BDIM_17840 [Brevundimonas diminuta ATCC 11568]
gi|328845389|gb|EGF94953.1| hypothetical protein BDIM_17840 [Brevundimonas diminuta ATCC 11568]
Length = 193
Score = 178 bits (452), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 88/172 (51%), Positives = 119/172 (69%), Gaps = 2/172 (1%)
Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
P ++IALFIDGANLY++++AL D+D++KL F +IRAYYYT ++ ++FSP+
Sbjct: 5 PDDRIALFIDGANLYSAARALNCDLDFKKLSTWFVGEGRLIRAYYYTAII--EGEEFSPV 62
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
PL+DWL YNGF VV K K FT+ G R K +MD+E+AVD E + L+ V+FSGDG
Sbjct: 63 RPLVDWLDYNGFTVVTKPVKRFTDAQGHSRTKGNMDMEIAVDMLELAPRLDQAVLFSGDG 122
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
F +V ALQ K +VT+VSTV S P SD LRRQAD F+DLA + N++ +
Sbjct: 123 DFRRVVQALQAKGVRVTVVSTVKSQPPQISDDLRRQADAFVDLADIMNQVGK 174
>gi|254418577|ref|ZP_05032301.1| conserved hypothetical protein [Brevundimonas sp. BAL3]
gi|196184754|gb|EDX79730.1| conserved hypothetical protein [Brevundimonas sp. BAL3]
Length = 180
Score = 177 bits (449), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 86/175 (49%), Positives = 122/175 (69%), Gaps = 2/175 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF +++A+FIDG+NLY++++AL D+D++++L FR ++I+ RAYYYT VV ++F
Sbjct: 1 MFHSTDRLAIFIDGSNLYSAARALQHDMDFKRMLDWFREKSILTRAYYYTAVV--EGEEF 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWL YNGF VV K K FT+ G R+K +MD+E+AVD E + L+H V+FS
Sbjct: 59 SPVKPLVDWLDYNGFSVVTKPVKRFTDGQGHSRIKGNMDIEIAVDMLELAPRLDHAVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
GDG F LV A+Q +VT+VST + P +D+LRRQAD F+DL L E R
Sbjct: 119 GDGDFRRLVQAVQALGVRVTVVSTQKTQPPHIADELRRQADAFLDLNDLMAEFCR 173
>gi|218514126|ref|ZP_03510966.1| hypothetical protein Retl8_10672 [Rhizobium etli 8C-3]
Length = 149
Score = 177 bits (448), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 80/135 (59%), Positives = 108/135 (80%), Gaps = 2/135 (1%)
Query: 45 RAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAV 104
RAYYYT ++ D Q++S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+
Sbjct: 1 RAYYYTALIED--QEYSSIRPLIDWLDYNGYKVVTKPAKEFTDSMGRRKIKGNMDIELAI 58
Query: 105 DAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
DA EQSE ++HLVIFSGDG FT LV ALQR+ +KV+++ST+ + P M +D LRRQAD+F+
Sbjct: 59 DAMEQSETVDHLVIFSGDGDFTNLVEALQRRGRKVSVISTMATQPPMIADDLRRQADHFI 118
Query: 165 DLAYLKNEIARDPDE 179
DL LK EI RDP E
Sbjct: 119 DLLSLKAEIGRDPSE 133
>gi|6136304|gb|AAF04325.1| unknown [Bradyrhizobium japonicum]
Length = 149
Score = 174 bits (442), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 83/150 (55%), Positives = 113/150 (75%), Gaps = 7/150 (4%)
Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
P KIALFIDGANLYA++K LGFDIDY++LLK F+SR ++RA+YYT ++ D Q++S +
Sbjct: 5 PTNKIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLLRAFYYTAIIED--QEYSSI 62
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
PL+DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FSGDG
Sbjct: 63 RPLIDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFSGDG 122
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMAS 153
F +LV A+QR+ +VT+ S PS AS
Sbjct: 123 DFRSLVEAVQRRGVRVTV-----SRPSPAS 147
>gi|312114148|ref|YP_004011744.1| hypothetical protein Rvan_1386 [Rhodomicrobium vannielii ATCC
17100]
gi|311219277|gb|ADP70645.1| hypothetical protein Rvan_1386 [Rhodomicrobium vannielii ATCC
17100]
Length = 178
Score = 170 bits (431), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 82/172 (47%), Positives = 117/172 (68%), Gaps = 2/172 (1%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
E++ LF+DG NL+A+++ LGF IDY LL+ FR+ +IR YY + D SPL
Sbjct: 7 ERLGLFLDGPNLFAAARTLGFMIDYGSLLRLFRNSGQLIRVNYYLPIADDFAT--SPLRG 64
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
+ DWL YNG+ V+ K AK++ + GR+++KS MD+ELAVDA + L+H+V+FSG G F
Sbjct: 65 VSDWLQYNGYTVITKPAKDYVDANGRRKIKSGMDIELAVDALSLANSLDHIVLFSGLGDF 124
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
LV+ALQR+ ++VT+VST+ + P + +D LRR AD F+DLA L I R P
Sbjct: 125 CGLVSALQRRGRRVTVVSTIRTQPPIVADDLRRMADQFIDLADLAPMIGRAP 176
>gi|240141795|ref|YP_002966303.1| hypothetical protein MexAM1_META2p0024 [Methylobacterium extorquens
AM1]
gi|240011737|gb|ACS42962.1| hypothetical protein DUF88 [Methylobacterium extorquens AM1]
Length = 185
Score = 170 bits (431), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 85/169 (50%), Positives = 127/169 (75%), Gaps = 3/169 (1%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
+ A+FIDGANLY+++KA+GFDIDY+KLL ++ R ++R YYT + D E +S L PL
Sbjct: 5 RTAVFIDGANLYSTTKAIGFDIDYKKLLAHYK-RDGLLRINYYTALYDDGE--YSSLRPL 61
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126
LDWL YNG++V++K AKE+T++ GR++ K ++D+E+AVDA E + ++ +V+FSGDG F
Sbjct: 62 LDWLDYNGYRVISKPAKEWTDSAGRRKTKGNLDIEIAVDALELAPHIDRMVLFSGDGDFR 121
Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
LV A+QR+ +V +VST+ + P+M SD+LRRQAD F+DLA + I +
Sbjct: 122 YLVEAMQRRGVRVVVVSTIQTQPAMVSDELRRQADEFVDLAKMMETIGQ 170
>gi|58040236|ref|YP_192200.1| hypothetical protein GOX1805 [Gluconobacter oxydans 621H]
gi|58002650|gb|AAW61544.1| Hypothetical protein GOX1805 [Gluconobacter oxydans 621H]
Length = 202
Score = 162 bits (409), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 80/171 (46%), Positives = 114/171 (66%), Gaps = 4/171 (2%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ-FSPLH 64
E+ ALFIDGA+L+ +++ LGF++D+R L F S+ + RA+YY + PE +SPL
Sbjct: 7 ERTALFIDGASLHHAARNLGFEVDFRSLRNLFESQCLFQRAFYYAAM---PETDDYSPLR 63
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
PL DWL YNG+ +V K A+EFT++ GR+R+K +MDVEL VD EQ+ L+H VI SGD
Sbjct: 64 PLTDWLAYNGYHLVLKNAREFTDHSGRRRIKGNMDVELTVDLLEQASRLDHAVIVSGDSD 123
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
V A+Q + +VT++S++ S P M D LRRQAD F++LA + R
Sbjct: 124 LRRAVEAVQARGVRVTVISSMRSTPLMIGDDLRRQADLFVELADIAPSFTR 174
>gi|294084108|ref|YP_003550866.1| hypothetical protein SAR116_0539 [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292663681|gb|ADE38782.1| Protein of unknown function DUF88 [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 183
Score = 159 bits (403), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 117/171 (68%), Gaps = 3/171 (1%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
+K ALFIDG+N YA+++AL DID+ ++ F +IRAYYYT + D Q+FS L P
Sbjct: 2 DKTALFIDGSNFYAAARALNLDIDFARMRTHFAKDTNLIRAYYYTAIPED--QEFSSLRP 59
Query: 66 LLDWLHYNGFQVVAKVAKEFT-ENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
L+DWL YNG+ VV+K+ +EF E GR+R+K +MD+ELA+D + + ++H ++FSGDG
Sbjct: 60 LVDWLDYNGYAVVSKLTREFIDEETGRRRLKGNMDMELALDMLKLAPHIDHAILFSGDGD 119
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
F L+ +Q + T+VST + P M +DQLRR AD ++D+A + +I++
Sbjct: 120 FCRLLEDVQALGVRTTVVSTNKTSPPMVADQLRRMADVYIDMADIAADISK 170
>gi|240139942|ref|YP_002964419.1| hypothetical protein MexAM1_META1p3405 [Methylobacterium extorquens
AM1]
gi|240009916|gb|ACS41142.1| Conserved hypothetical protein (DUF88) [Methylobacterium extorquens
AM1]
Length = 168
Score = 151 bits (382), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 64/123 (52%), Positives = 97/123 (78%)
Query: 57 EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHL 116
+Q++S + PL+DWL YNG++VV K KEFT++ GR+++K +MD+ELA+DA E + ++H+
Sbjct: 4 DQEYSSIRPLIDWLDYNGYRVVTKPVKEFTDSAGRRKIKGNMDIELAIDALELAPHIDHM 63
Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
V+FSGDG F +LV A+QR+ +V++VST+ + P+M +D LRRQAD F+DLA+L + I RD
Sbjct: 64 VLFSGDGDFRSLVEAIQRRGVRVSVVSTIQTQPAMIADDLRRQADEFIDLAHLASRIGRD 123
Query: 177 PDE 179
P E
Sbjct: 124 PSE 126
>gi|254461881|ref|ZP_05075297.1| hypothetical protein RB2083_2472 [Rhodobacterales bacterium
HTCC2083]
gi|206678470|gb|EDZ42957.1| hypothetical protein RB2083_2472 [Rhodobacteraceae bacterium
HTCC2083]
Length = 200
Score = 151 bits (382), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 73/175 (41%), Positives = 115/175 (65%), Gaps = 2/175 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E+IA+FIDG +L+A SKALGFDID++ K F R + + Y+TT+V ++F
Sbjct: 1 MFYKDERIAVFIDGKSLFACSKALGFDIDFKLFRKEFSQRGKLNKLSYFTTLVD--SEEF 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG+ V K KE+ + GR++VK ++ VE+ + + ++H++I +
Sbjct: 59 SSVKPLVDWLSYNGYNTVTKPVKEYVDTAGRRKVKGNISVEMTIAVLDMVPFVDHIIIVT 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
GD F LV A+Q++ +V++VS++ P M SD LRRQAD F++L L++ I +
Sbjct: 119 GDKDFKPLVEAVQQRGTRVSVVSSIRVQPPMLSDDLRRQADNFIELDELRSVIEK 173
>gi|193782651|ref|NP_435936.2| hypothetical protein SMa1264 [Sinorhizobium meliloti 1021]
gi|46403700|gb|AAS92906.1| hypothetical protein [Sinorhizobium meliloti]
gi|193073107|gb|AAK65348.2| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
Length = 177
Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/145 (50%), Positives = 103/145 (71%), Gaps = 2/145 (1%)
Query: 35 KAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRV 94
+ F S I YY +V D Q+ + L+DWL YNG+Q+V K +EFT+ GR+R+
Sbjct: 18 RLFGSAPICCGGNYYAPLVED--QETPTIRLLIDWLDYNGYQMVTKPIREFTDTLGRRRI 75
Query: 95 KSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASD 154
K +MD++LA+DA E ++ +HLVIFSGDG FT++VAALQRK +VT+VST+ + P M S
Sbjct: 76 KGNMDIDLAIDAIELAKTADHLVIFSGDGNFTSVVAALQRKGCRVTVVSTMATRPPMISG 135
Query: 155 QLRRQADYFMDLAYLKNEIARDPDE 179
+LRR+AD+F+DLA L+ EIAR+ E
Sbjct: 136 ELRREADHFIDLAKLRGEIAREHAE 160
>gi|254510985|ref|ZP_05123052.1| hypothetical protein RKLH11_1520 [Rhodobacteraceae bacterium KLH11]
gi|221534696|gb|EEE37684.1| hypothetical protein RKLH11_1520 [Rhodobacteraceae bacterium KLH11]
Length = 183
Score = 143 bits (361), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 115/178 (64%), Gaps = 3/178 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E A+F+DG NL+ S+KALGFD+DY +L + ++RA Y+T ++ ++
Sbjct: 3 MFHQNETTAIFVDGYNLHHSAKALGFDVDYERLKSMVEKQCHLLRATYFTMLI--ERDEY 60
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
PL+D+L YNG+ V AK A+EF GR R K ++V+LA+ A + + H V+F+
Sbjct: 61 IATRPLVDFLQYNGWTVTAKDAREFVHGDGRSRFKGRIEVDLALAAARITPHINHAVLFT 120
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
G F LV LQ + +V++VST+ ++P +ASDQLRR+AD F++LA +++ IAR PD
Sbjct: 121 GSQDFCPLVEYLQDQGVRVSVVSTIKTEPILASDQLRRKADKFIELADIRDVIAR-PD 177
>gi|94985935|ref|YP_605299.1| hypothetical protein Dgeo_1835 [Deinococcus geothermalis DSM 11300]
gi|94556216|gb|ABF46130.1| protein of unknown function DUF88 [Deinococcus geothermalis DSM
11300]
Length = 194
Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 102/173 (58%), Gaps = 13/173 (7%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTV---VGDPEQQFSP 62
E+IALFIDGAN+YA++K LG++ D+RK+L+ FRS + A+YYT V + D +++F
Sbjct: 3 ERIALFIDGANVYAAAKRLGWNFDHRKMLEFFRSYGSLHNAFYYTAVPLPMDDKQKRF-- 60
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
+D L Y G+ V + +E T+ G ++S+D+E+ D S+ + V+ +GD
Sbjct: 61 ----IDALTYMGYTVRTRPLRESTDEHGDTHRRASLDIEIVTDLLTTSDRFDTAVLLTGD 116
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
G F V L+ + K+V + S P M S +LR AD ++DL ++ ++ R
Sbjct: 117 GDFERPVEVLRARGKRVVVASI----PEMTSYELRNAADEYVDLGAIREQVER 165
>gi|114766684|ref|ZP_01445623.1| hypothetical protein 1100011001297_R2601_11634 [Pelagibaca
bermudensis HTCC2601]
gi|114541074|gb|EAU44129.1| hypothetical protein R2601_11634 [Roseovarius sp. HTCC2601]
Length = 117
Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 76/103 (73%)
Query: 77 VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKV 136
+V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FSGDG F LV +LQR+
Sbjct: 1 MVTKPAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHIVLFSGDGDFRPLVESLQRQG 60
Query: 137 KKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
+V++VST+ S P M +D+LRRQAD F++L L+ I R P E
Sbjct: 61 VRVSVVSTIRSQPPMIADELRRQADNFIELDELREVIGRPPRE 103
>gi|15807658|ref|NP_295720.1| hypothetical protein DR_1997m [Deinococcus radiodurans R1]
gi|970086|dbj|BAA09936.1| ORF1 [Deinococcus radiodurans]
Length = 200
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 99/173 (57%), Gaps = 13/173 (7%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTV---VGDPEQQFSP 62
E+IALFIDGAN+YA++K LG++ D+RK+L+ F + A+YYT V V D +++F
Sbjct: 2 ERIALFIDGANVYAAAKRLGWNFDHRKILEHFAGLGALYNAFYYTAVPWPVDDKQKRF-- 59
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
+D L Y G+ V + +E T+ G ++S+D+EL D + V+ SGD
Sbjct: 60 ----VDALTYMGYTVRTRPLRENTDENGDTSRRASLDIELVTDLLTTESRYDVAVLLSGD 115
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
G F V L+ + KKV + S P M S +LR AD ++DLA ++ ++ R
Sbjct: 116 GDFERPVEVLRARGKKVIVASI----PEMTSAELRNAADEYVDLASIREQVER 164
>gi|23009928|ref|ZP_00050797.1| COG1432: Uncharacterized conserved protein [Magnetospirillum
magnetotacticum MS-1]
Length = 110
Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 74/94 (78%)
Query: 78 VAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVK 137
+ K KEFT++ GR+++K +MD+ELA+DA E + ++H+V+FSGDG F +LV A+QR+
Sbjct: 1 MTKPVKEFTDSAGRRKIKGNMDIELAIDALELAPYIDHMVLFSGDGDFRSLVEAIQRRGV 60
Query: 138 KVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
+V++VST+ + P+M +D LRRQAD F+DLA+L N
Sbjct: 61 RVSVVSTIQTQPAMIADDLRRQADEFVDLAHLAN 94
>gi|6459785|gb|AAF11547.1|AE002037_8 conserved hypothetical protein [Deinococcus radiodurans R1]
Length = 263
Score = 108 bits (271), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 99/173 (57%), Gaps = 13/173 (7%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTV---VGDPEQQFSP 62
E+IALFIDGAN+YA++K LG++ D+RK+L+ F + A+YYT V V D +++F
Sbjct: 65 ERIALFIDGANVYAAAKRLGWNFDHRKILEHFAGLGALYNAFYYTAVPWPVDDKQKRF-- 122
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
+D L Y G+ V + +E T+ G ++S+D+EL D + V+ SGD
Sbjct: 123 ----VDALTYMGYTVRTRPLRENTDENGDTSRRASLDIELVTDLLTTESRYDVAVLLSGD 178
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
G F V L+ + KKV + S P M S +LR AD ++DLA ++ ++ R
Sbjct: 179 GDFERPVEVLRARGKKVIVASI----PEMTSAELRNAADEYVDLASIREQVER 227
>gi|86607727|ref|YP_476489.1| hypothetical protein CYB_0228 [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86556269|gb|ABD01226.1| conserved hypothetical protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 200
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 100/173 (57%), Gaps = 12/173 (6%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
D R ++A+FIDG+NL+ ++ LG +IDY +LLK R+ ++R+++YT V + E+Q
Sbjct: 18 DNRGRVAIFIDGSNLFYAALQLGIEIDYTRLLKTLSGRSPLLRSFFYTGVDRNNEKQ--- 74
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
L W+ NG++VV K + + G KR +++DVE+AVD E V+ SGD
Sbjct: 75 -QGFLLWMRRNGYRVVTKELTQLPD--GSKR--ANLDVEIAVDMLSLVRWYETAVLVSGD 129
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
G V A+ + +V +VS SM SDQL AD ++DL +K++I +
Sbjct: 130 GDLAYAVNAVSYQGARVEVVSL----RSMTSDQLINLADRYIDLESIKDQIKK 178
>gi|86605182|ref|YP_473945.1| hypothetical protein CYA_0464 [Synechococcus sp. JA-3-3Ab]
gi|86553724|gb|ABC98682.1| conserved hypothetical protein [Synechococcus sp. JA-3-3Ab]
Length = 198
Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 100/173 (57%), Gaps = 12/173 (6%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
D R ++A+FIDG+NL+ ++ +G +IDY +LLK R+ ++R+++YT V + E+Q
Sbjct: 18 DDRGRVAIFIDGSNLFYAALQMGIEIDYTRLLKTLTGRSPLLRSFFYTGVDRNNEKQ--- 74
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
L W+ NG++VV K + + G KR +++DVE+AVD E V+ SGD
Sbjct: 75 -QGFLLWMRRNGYRVVTKELTQLPD--GSKR--ANLDVEIAVDMLSLVRWYETAVLVSGD 129
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
G V A+ + +V +VS SM SDQL AD ++DL +K++I +
Sbjct: 130 GDLAYAVNAVSYQGARVEVVSLR----SMTSDQLINLADRYIDLESIKDQIKK 178
>gi|320335491|ref|YP_004172202.1| hypothetical protein Deima_2908 [Deinococcus maricopensis DSM
21211]
gi|319756780|gb|ADV68537.1| Domain of unknown function DUF88 [Deinococcus maricopensis DSM
21211]
Length = 192
Score = 101 bits (251), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 98/173 (56%), Gaps = 13/173 (7%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTV---VGDPEQQFSP 62
E+I LFIDGAN+YA++K LG++ D+RK+L+ F + A+YYT V V D +++F
Sbjct: 2 ERIGLFIDGANVYAAAKRLGWNFDHRKILEHFAGYGRLYNAFYYTAVPTPVDDKQKRF-- 59
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
+D L Y G+ V K+ +E T+ G ++++D+ L D ++ + ++ +GD
Sbjct: 60 ----IDALTYMGYTVRTKMLRENTDEHGDTHRRANLDILLVTDLLATADLYDTAILLTGD 115
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
G F V L+ K K+V + S P M S +LR AD ++D ++ ++ R
Sbjct: 116 GDFERPVEVLRAKGKRVIVASI----PEMTSYELRNAADAYVDFKDIRGDVER 164
>gi|226356860|ref|YP_002786600.1| hypothetical protein Deide_18580 [Deinococcus deserti VCD115]
gi|226318850|gb|ACO46846.1| Conserved hypothetical protein [Deinococcus deserti VCD115]
Length = 197
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 99/173 (57%), Gaps = 13/173 (7%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTV---VGDPEQQFSP 62
E+IALFIDGAN+YA++K LG++ D+RK+L+ F ++ + A+YYT V + D +++F+
Sbjct: 2 ERIALFIDGANVYAAAKRLGWNFDHRKILEHFAAQGRLYNAFYYTAVPMPIDDKQKRFT- 60
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
D L Y G+ V + +E T+ G ++++DVE+ D ++ + V+ +GD
Sbjct: 61 -----DALTYMGYTVRTRPLRESTDEHGDTSRRANLDVEIVTDLLTTADRYDTAVLLTGD 115
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
G F V L+ + K+V + S M S +LR AD ++D ++ + R
Sbjct: 116 GDFERPVEVLRARGKRVVVASIA----EMTSYELRNAADEYVDFKDIRVHVER 164
>gi|325282672|ref|YP_004255213.1| hypothetical protein Deipr_0426 [Deinococcus proteolyticus MRP]
gi|324314481|gb|ADY25596.1| Domain of unknown function DUF88 [Deinococcus proteolyticus MRP]
Length = 214
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 96/173 (55%), Gaps = 13/173 (7%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVG---DPEQQFSP 62
++IALF+DGA++Y+++K LG++ D+RK+L+ FR R + A+YYT + D +++F+
Sbjct: 4 QRIALFVDGASIYSAAKRLGWNFDHRKVLEYFRERGRLHNAFYYTALPAQFDDKQKRFT- 62
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
D L Y G+ V + +E + G ++S+D+EL D + + V+ SG
Sbjct: 63 -----DALTYMGYTVRTQPLRETVDESGVSYRQTSLDIELVTDLLTGLDHFDAAVLMSGG 117
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
G F + L+ + K+ +VS P M S +LR AD ++DL L+ R
Sbjct: 118 GGFERPLEVLRARGKRTVVVSI----PEMTSYELRNAADEYLDLRDLRQRFER 166
>gi|149913285|ref|ZP_01901818.1| hypothetical protein RAZWK3B_08291 [Roseobacter sp. AzwK-3b]
gi|149812405|gb|EDM72234.1| hypothetical protein RAZWK3B_08291 [Roseobacter sp. AzwK-3b]
Length = 186
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 97/174 (55%), Gaps = 3/174 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
M +K+A+ IDG L + LG IDYR+L F + + YY V D ++
Sbjct: 6 MLYSTDKLAILIDGQALTSLGFGLGMKIDYRRLKSRFARVSKLTTVKYYAIV--DADKVE 63
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
+P LLDWL YNG+Q+ K+A+ F + G RVK S+ +L+VD ++ ++H+++
Sbjct: 64 NPYVKLLDWLDYNGYQIHRKMARVFDDVDG-ARVKGSITADLSVDIIMMAKQVDHILLIG 122
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
G + + +R +VT++S++ ++ +D LRR D F++L L+NEIA
Sbjct: 123 GHTDYCYAIQQAKRFGARVTLLSSLKAEGFRPADDLRRIVDDFIELEDLRNEIA 176
>gi|284052456|ref|ZP_06382666.1| hypothetical protein AplaP_13393 [Arthrospira platensis str.
Paraca]
gi|291571487|dbj|BAI93759.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 205
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 99/177 (55%), Gaps = 12/177 (6%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ + R ++A+FIDG+NL+ ++ LG +IDY KLL S + ++R+++YT V E+Q
Sbjct: 18 ILENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTSGSRLLRSFFYTGVDRTNEKQ- 76
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L W+ NG++VVAK + + G K K+++DVE+AVD + V+ S
Sbjct: 77 ---QGFLLWMRRNGYRVVAKDLVQLPD--GSK--KANLDVEIAVDMIALVGAYDTAVLVS 129
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
GDG V + + +V ++S SM SD L AD ++DL +K+EI + P
Sbjct: 130 GDGDLAYAVDCVSYRGVRVEVISL----RSMTSDSLINVADRYIDLEAIKDEIQKTP 182
>gi|16331574|ref|NP_442302.1| hypothetical protein slr0650 [Synechocystis sp. PCC 6803]
gi|1001641|dbj|BAA10372.1| slr0650 [Synechocystis sp. PCC 6803]
Length = 201
Score = 94.7 bits (234), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 97/177 (54%), Gaps = 12/177 (6%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++RA++YT V E+Q
Sbjct: 16 LLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLHCLTGGSRLLRAFFYTGVDRSNEKQ- 74
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L W+ NG++V+AK + + G K K+++DVE+AVD + V+ S
Sbjct: 75 ---QGFLLWMRRNGYRVIAKDLVQLPD--GSK--KANLDVEIAVDLMSLVGSYDTAVVVS 127
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
GDG A+ + ++ +VS SM SD L +D ++DL +K EI + P
Sbjct: 128 GDGDLAYAADAVSYRGARIEVVSL----RSMTSDSLINVSDRYVDLDSIKEEIQKQP 180
>gi|56750416|ref|YP_171117.1| hypothetical protein syc0407_c [Synechococcus elongatus PCC 6301]
gi|81299952|ref|YP_400160.1| hypothetical protein Synpcc7942_1143 [Synechococcus elongatus PCC
7942]
gi|56685375|dbj|BAD78597.1| hypothetical protein [Synechococcus elongatus PCC 6301]
gi|81168833|gb|ABB57173.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942]
Length = 198
Score = 94.0 bits (232), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 99/179 (55%), Gaps = 12/179 (6%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ + R +IA+FIDG+NL+ ++ LG +IDY KLL + + ++R+++YT V E+Q
Sbjct: 16 ILENRGRIAIFIDGSNLFYAALQLGIEIDYTKLLACLTNGSRLLRSFFYTGVDRSNEKQ- 74
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L W+ NG++VVAK + + G K K+++DVE+AVD + + V+ S
Sbjct: 75 ---QGFLLWMRRNGYRVVAKDLIQLPD--GTK--KANLDVEIAVDMLALAGTYDTAVLVS 127
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG V + + +V +VS SM SD L AD ++DL LK I + P +
Sbjct: 128 GDGDLAYAVEVVGYRGVRVEVVSL----RSMTSDNLINVADRYIDLESLKASIQKLPRQ 182
>gi|119487031|ref|ZP_01620903.1| hypothetical protein L8106_18981 [Lyngbya sp. PCC 8106]
gi|119455960|gb|EAW37094.1| hypothetical protein L8106_18981 [Lyngbya sp. PCC 8106]
Length = 205
Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 98/177 (55%), Gaps = 12/177 (6%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++R+++YT V E+Q
Sbjct: 16 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRSFFYTGVDRTNEKQ- 74
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L W+ NG++V+AK + + G K K+++DVE+AVD + V+ S
Sbjct: 75 ---QGFLLWMRRNGYRVIAKDLVQLPD--GSK--KANLDVEIAVDMLALVGSYDTAVLVS 127
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
GDG V + + +V +VS SM SD L AD ++DL +K EI ++P
Sbjct: 128 GDGDLAYAVDCVSYRGVRVEVVSL----RSMTSDSLINVADRYIDLENVKEEIQKNP 180
>gi|119512208|ref|ZP_01631298.1| hypothetical protein N9414_13695 [Nodularia spumigena CCY9414]
gi|119463174|gb|EAW44121.1| hypothetical protein N9414_13695 [Nodularia spumigena CCY9414]
Length = 209
Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 100/177 (56%), Gaps = 12/177 (6%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++R+++YT V E+Q
Sbjct: 16 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRSFFYTGVDRTNEKQ- 74
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L W+ NG++V+AK + + G K K+++DVE+AVD + + V+ S
Sbjct: 75 ---QGFLLWMRRNGYRVIAKDLVQLPD--GSK--KANLDVEIAVDMMALVDSYDTAVLVS 127
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
GDG V ++ + +V +VS SM SD L +D ++DL +K +I ++P
Sbjct: 128 GDGDLAYAVNSVSYRGVRVEVVSL----RSMTSDSLINVSDRYIDLEAIKEDIQKNP 180
>gi|220908708|ref|YP_002484019.1| hypothetical protein Cyan7425_3333 [Cyanothece sp. PCC 7425]
gi|219865319|gb|ACL45658.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7425]
Length = 207
Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 99/177 (55%), Gaps = 12/177 (6%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ + R ++A+FIDG+NL+ ++ LG +IDY KLL S + ++R+++YT V E+Q
Sbjct: 15 VLENRGRVAIFIDGSNLFYAALQLGIEIDYSKLLCRLTSGSRLLRSFFYTGVDPTNEKQ- 73
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L W+ NG++V+AK + + G K K+++DVE+AVD + V+ S
Sbjct: 74 ---QGFLLWMRRNGYRVIAKDLVQLPD--GSK--KANLDVEIAVDMMSLVGSYDTGVLVS 126
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
GDG V A+ + +V +VS SM SD L AD ++DL +K +I + P
Sbjct: 127 GDGDLAYAVDAVSYRGVRVEVVSL----RSMTSDSLINVADRYIDLDSIKEDIQKAP 179
>gi|298492951|ref|YP_003723128.1| hypothetical protein Aazo_4859 ['Nostoc azollae' 0708]
gi|298234869|gb|ADI66005.1| protein of unknown function DUF88 ['Nostoc azollae' 0708]
Length = 210
Score = 93.2 bits (230), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 99/177 (55%), Gaps = 12/177 (6%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++RA++YT V E+Q
Sbjct: 17 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRAFFYTGVDRTNEKQ- 75
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L W+ NG++V+AK + + G K K+++DVE+AVD + + V+ S
Sbjct: 76 ---QGFLLWMRRNGYRVIAKDLVQLPD--GSK--KANLDVEIAVDMMALVDSYDTAVLVS 128
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
GDG V ++ + +V +VS SM SD L +D ++DL +K +I + P
Sbjct: 129 GDGDLAYAVNSVSYRGVRVEVVSL----RSMTSDSLINVSDRYIDLEAIKEDIQKTP 181
>gi|17227728|ref|NP_484276.1| hypothetical protein all0232 [Nostoc sp. PCC 7120]
gi|75908934|ref|YP_323230.1| hypothetical protein Ava_2722 [Anabaena variabilis ATCC 29413]
gi|17135210|dbj|BAB77756.1| all0232 [Nostoc sp. PCC 7120]
gi|75702659|gb|ABA22335.1| Protein of unknown function DUF88 [Anabaena variabilis ATCC 29413]
Length = 209
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 99/177 (55%), Gaps = 12/177 (6%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++RA++YT V E+Q
Sbjct: 16 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRAFFYTGVDRTNEKQ- 74
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L W+ NG++V+AK + + G K K+++DVE+AVD + + V+ S
Sbjct: 75 ---QGFLLWMRRNGYRVIAKDLVQLPD--GSK--KANLDVEIAVDMMALVDSYDTAVLVS 127
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
GDG V ++ + +V +VS SM SD L +D ++DL +K +I + P
Sbjct: 128 GDGDLAYAVNSVSYRGVRVEVVSL----RSMTSDSLINVSDRYIDLEAIKEDIQKTP 180
>gi|218248715|ref|YP_002374086.1| hypothetical protein PCC8801_3991 [Cyanothece sp. PCC 8801]
gi|257061778|ref|YP_003139666.1| hypothetical protein Cyan8802_4033 [Cyanothece sp. PCC 8802]
gi|218169193|gb|ACK67930.1| protein of unknown function DUF88 [Cyanothece sp. PCC 8801]
gi|256591944|gb|ACV02831.1| protein of unknown function DUF88 [Cyanothece sp. PCC 8802]
Length = 226
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 97/177 (54%), Gaps = 12/177 (6%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++RA++YT V E+Q
Sbjct: 41 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRAFFYTGVDRTNEKQ- 99
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L W+ NG++V+AK + + G K K+++DVE+AVD + VI S
Sbjct: 100 ---QGFLLWMRRNGYRVIAKDLVQLPD--GSK--KANLDVEIAVDLMALVGSYDTAVIVS 152
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
GDG A+ + ++ +VS SM SD L AD ++DL +K +I + P
Sbjct: 153 GDGDLAYAADAVSYRGSRIEVVSL----RSMTSDSLINVADRYIDLDQIKEDIQKSP 205
>gi|282896531|ref|ZP_06304551.1| Protein of unknown function DUF88 [Raphidiopsis brookii D9]
gi|281198637|gb|EFA73518.1| Protein of unknown function DUF88 [Raphidiopsis brookii D9]
Length = 248
Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 99/177 (55%), Gaps = 12/177 (6%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++RA++YT V E+Q
Sbjct: 55 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRAFFYTGVDRTNEKQ- 113
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L W+ NG++V+AK + + G K K+++DVE+AVD + + V+ S
Sbjct: 114 ---QGFLLWMRRNGYRVIAKDLVQLPD--GSK--KANLDVEIAVDMMALVDSYDTAVLVS 166
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
GDG V ++ + +V +VS SM SD L +D ++DL ++ +I + P
Sbjct: 167 GDGDLAYAVNSVSYRGVRVEVVSL----RSMTSDSLINVSDRYIDLEAIREDIQKTP 219
>gi|37522591|ref|NP_925968.1| hypothetical protein gll3022 [Gloeobacter violaceus PCC 7421]
gi|35213592|dbj|BAC90963.1| gll3022 [Gloeobacter violaceus PCC 7421]
Length = 216
Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 98/176 (55%), Gaps = 12/176 (6%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
R ++A+FIDG+NL+ ++ LG +IDY KLL + + ++R+++YT V E+Q
Sbjct: 19 RGRVAIFIDGSNLFYAALQLGIEIDYTKLLNRLTNGSRLLRSFFYTGVDRANEKQ----Q 74
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
L W+ NG++V+ K + + G K K+++DVE+AVD + + ++ SGDG
Sbjct: 75 GFLLWMRRNGYRVITKDLVQLPD--GSK--KANLDVEIAVDMLSLAGSYDTAILVSGDGD 130
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
V A K +V +VS SM SD L AD ++DL +K +I + P ++
Sbjct: 131 LAYAVNAASYKGVRVEVVSL----RSMTSDYLINVADRYIDLEQIKEDIQKAPRQN 182
>gi|282900793|ref|ZP_06308733.1| protein of unknown function DUF88 [Cylindrospermopsis raciborskii
CS-505]
gi|281194323|gb|EFA69280.1| protein of unknown function DUF88 [Cylindrospermopsis raciborskii
CS-505]
Length = 251
Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 99/177 (55%), Gaps = 12/177 (6%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++RA++YT V E+Q
Sbjct: 58 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRAFFYTGVDRTNEKQ- 116
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L W+ NG++V+AK + + G K K+++DVE+AVD + + V+ S
Sbjct: 117 ---QGFLLWMRRNGYRVIAKDLVQLPD--GSK--KANLDVEIAVDMMALVDSYDTAVLVS 169
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
GDG V ++ + +V +VS SM SD L +D ++DL ++ +I + P
Sbjct: 170 GDGDLAYAVNSVSYRGVRVEVVSL----RSMTSDSLINVSDRYIDLEAIREDIQKTP 222
>gi|269837665|ref|YP_003319893.1| hypothetical protein Sthe_1637 [Sphaerobacter thermophilus DSM
20745]
gi|269786928|gb|ACZ39071.1| protein of unknown function DUF88 [Sphaerobacter thermophilus DSM
20745]
Length = 201
Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 83/161 (51%), Gaps = 12/161 (7%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
+K+A+F D +NLY +++ LG IDY +LL + RAY Y V D P
Sbjct: 8 DKVAVFFDMSNLYFAARDLGIKIDYTRLLDFIVGGRRLHRAYAYMAVAPDDNTAV----P 63
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
L WL NGF+V+ K + +++ K +D+ELAVD Q+ ++ VI SGDG F
Sbjct: 64 FLTWLRRNGFRVITKTLRRYSDGTS----KGDLDMELAVDLLSQAPYIDVAVIVSGDGDF 119
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
T LV QR +V I ST P + L AD ++DL
Sbjct: 120 TYLVDRAQRLGLRVEIAST----PRYTATDLMEIADRYIDL 156
>gi|186686260|ref|YP_001869456.1| hypothetical protein Npun_R6229 [Nostoc punctiforme PCC 73102]
gi|186468712|gb|ACC84513.1| protein of unknown function DUF88 [Nostoc punctiforme PCC 73102]
Length = 231
Score = 91.7 bits (226), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 95/174 (54%), Gaps = 12/174 (6%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
R ++A+FIDG NL+ ++ LG +IDY KLL + + ++RA++YT V E+Q
Sbjct: 57 RGRVAIFIDGLNLFHTALQLGIEIDYVKLLCHLTNGSRLLRAFFYTGVDNSNEKQ----Q 112
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
L W+ NG++VVAK + EN KS+++VE+AVD + + V+ SGDG
Sbjct: 113 GFLLWMRRNGYRVVAKDIMQPAENFK----KSNLNVEIAVDMITLAPYYDTAVLVSGDGD 168
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
V A+ R +V +VS + S+ L AD F+DL +K I +D +
Sbjct: 169 LAYAVNAVSRMGVRVEVVSL----QTTTSESLIDVADCFIDLDSIKAHIQKDSN 218
>gi|186680639|ref|YP_001863835.1| hypothetical protein Npun_R0091 [Nostoc punctiforme PCC 73102]
gi|186463091|gb|ACC78892.1| protein of unknown function DUF88 [Nostoc punctiforme PCC 73102]
Length = 210
Score = 91.7 bits (226), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 99/177 (55%), Gaps = 12/177 (6%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++R+++YT V E+Q
Sbjct: 17 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRSFFYTGVDRTNEKQ- 75
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L W+ NG++V+AK + + G K K+++DVE+AVD + + V+ S
Sbjct: 76 ---QGFLLWMRRNGYRVIAKDLVQLPD--GSK--KANLDVEIAVDMMALVDSYDTAVLVS 128
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
GDG V ++ + +V +VS SM SD L +D ++DL +K +I + P
Sbjct: 129 GDGDLAYAVNSVSYRGVRVEVVSL----RSMTSDSLINVSDRYIDLEAIKEDIQKTP 181
>gi|284929296|ref|YP_003421818.1| hypothetical protein UCYN_07430 [cyanobacterium UCYN-A]
gi|284809740|gb|ADB95437.1| uncharacterized conserved protein [cyanobacterium UCYN-A]
Length = 227
Score = 91.7 bits (226), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 97/175 (55%), Gaps = 12/175 (6%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
M + R ++A+FIDG+NL+ ++ LG +IDY +LL + ++RA++YT V E+Q
Sbjct: 42 MLENRGRVAIFIDGSNLFYAALQLGIEIDYTRLLYRLTEGSRLLRAFFYTGVDRTNEKQ- 100
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L W+ NG++V+AK + + G K K+++DVE+AVD + +I S
Sbjct: 101 ---QGFLLWMRRNGYRVIAKDLVQLPD--GSK--KANLDVEIAVDLMALVGSYDTAIIVS 153
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
GDG ++ + +V +VS SM SD L AD+++DL +K +I +
Sbjct: 154 GDGDLAYAANSVSYRGARVEVVSL----RSMTSDSLINVADHYIDLDQIKEDIQK 204
>gi|218437105|ref|YP_002375434.1| hypothetical protein PCC7424_0096 [Cyanothece sp. PCC 7424]
gi|218169833|gb|ACK68566.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7424]
Length = 201
Score = 91.3 bits (225), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 97/175 (55%), Gaps = 12/175 (6%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ + R ++A+FIDG+NL+ ++ LG +IDY KLL + + ++RA++YT V E+Q
Sbjct: 16 ILENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLYRLTNGSKLLRAFFYTGVDRSNEKQ- 74
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L W+ NG++V+AK + + G K K+++DVE+AVD + VI S
Sbjct: 75 ---QGFLLWMRRNGYRVIAKDLVQLPD--GSK--KANLDVEIAVDLMSLVGSYDTAVIVS 127
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
GDG A+ + +V +VS SM SD L AD ++DL +K +I +
Sbjct: 128 GDGDLAYAANAVSYQGARVEVVSL----RSMTSDSLINVADRYVDLDQIKEDIQK 178
>gi|307151237|ref|YP_003886621.1| hypothetical protein Cyan7822_1345 [Cyanothece sp. PCC 7822]
gi|306981465|gb|ADN13346.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7822]
Length = 222
Score = 90.9 bits (224), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 97/175 (55%), Gaps = 12/175 (6%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ + R ++A+FIDG+NL+ ++ LG +IDY KLL + + ++RA++YT V E+Q
Sbjct: 37 ILENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLFRLTNGSKLLRAFFYTGVDRSNEKQ- 95
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L W+ NG++V+AK + + G K K+++DVE+AVD + VI S
Sbjct: 96 ---QGFLLWMRRNGYRVIAKDLVQLPD--GSK--KANLDVEIAVDLMSLVGSYDTAVIVS 148
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
GDG A+ + +V +VS SM SD L AD ++DL +K +I +
Sbjct: 149 GDGDLAYAANAVSYRGARVEVVSL----RSMTSDSLINVADRYVDLDQIKEDIQK 199
>gi|189347490|ref|YP_001944019.1| hypothetical protein Clim_2008 [Chlorobium limicola DSM 245]
gi|189341637|gb|ACD91040.1| protein of unknown function DUF88 [Chlorobium limicola DSM 245]
Length = 304
Score = 90.9 bits (224), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 81/146 (55%), Gaps = 16/146 (10%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
+K ALFIDGANL+ + + LG+ ID+ +L+ F +R V+ A YY SP P
Sbjct: 31 QKAALFIDGANLFYTQRHLGWQIDFSRLMLYFTNRYTVVSARYYVP---------SPDPP 81
Query: 66 LLDWLHYN------GFQVVAK-VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVI 118
D + +N GF++++K V K + G +K ++D+ELAVDA E V+
Sbjct: 82 SEDQVAFNRVLITHGFEIISKPVKKIVNRDTGEIIMKGNLDIELAVDAMLTEHQFEVFVL 141
Query: 119 FSGDGCFTTLVAALQRKVKKVTIVST 144
FSGD F L+ A+Q K K V++ ST
Sbjct: 142 FSGDSDFLPLIMAMQMKGKTVSVFST 167
>gi|159029235|emb|CAO87595.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 201
Score = 90.5 bits (223), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 97/175 (55%), Gaps = 12/175 (6%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ + R ++A+FIDG+NL+ ++ LG +IDY KLL + + ++RA++YT V E+Q
Sbjct: 16 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTAGSRLLRAFFYTGVDRTNEKQ- 74
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L W+ NG++V+AK + + G K K+++DVE+AVD + VI S
Sbjct: 75 ---QGFLLWMRRNGYRVIAKDLVQLPD--GSK--KANLDVEIAVDLMALVGSYDTAVIVS 127
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
GDG ++ + +V +VS SM SD L AD ++DL +K EI +
Sbjct: 128 GDGDLAYAADSVSYRGARVEVVSL----RSMTSDSLINVADRYVDLDQIKEEIQK 178
>gi|166367025|ref|YP_001659298.1| hypothetical protein MAE_42840 [Microcystis aeruginosa NIES-843]
gi|166089398|dbj|BAG04106.1| hypothetical protein MAE_42840 [Microcystis aeruginosa NIES-843]
Length = 201
Score = 90.5 bits (223), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 97/175 (55%), Gaps = 12/175 (6%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ + R ++A+FIDG+NL+ ++ LG +IDY KLL + + ++RA++YT V E+Q
Sbjct: 16 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTAGSRLLRAFFYTGVDRTNEKQ- 74
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L W+ NG++V+AK + + G K K+++DVE+AVD + VI S
Sbjct: 75 ---QGFLLWMRRNGYRVIAKDLVQLPD--GSK--KANLDVEIAVDLMALVGSYDTAVIVS 127
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
GDG ++ + +V +VS SM SD L AD ++DL +K EI +
Sbjct: 128 GDGDLAYAADSVSYRGARVEVVSL----RSMTSDSLINVADRYVDLDQIKEEIQK 178
>gi|332707287|ref|ZP_08427340.1| hypothetical protein LYNGBM3L_34690 [Lyngbya majuscula 3L]
gi|332354021|gb|EGJ33508.1| hypothetical protein LYNGBM3L_34690 [Lyngbya majuscula 3L]
Length = 200
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 100/180 (55%), Gaps = 12/180 (6%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ + R ++A+FIDG+NL+ ++ LG +IDY KLL + + ++R+++YT V E+Q
Sbjct: 16 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTAGSRLLRSFFYTGVDRTNEKQ- 74
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L W+ NG++V+AK + + G K K+++DVE+AVD + V+ S
Sbjct: 75 ---QGFLLWMRRNGYRVIAKDLVQLPD--GSK--KANLDVEIAVDMMALVGSYDTAVLVS 127
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG V ++ + +V +VS SM SD L AD ++DL ++ I + P ++
Sbjct: 128 GDGDLAYAVDSVSYRGVRVEVVSL----RSMTSDSLINVADRYIDLDTIQESIQKTPKQN 183
>gi|22298293|ref|NP_681540.1| hypothetical protein tlr0751 [Thermosynechococcus elongatus BP-1]
gi|22294472|dbj|BAC08302.1| tlr0751 [Thermosynechococcus elongatus BP-1]
Length = 227
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 95/173 (54%), Gaps = 12/173 (6%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
R ++A+FIDG+NL+ ++ LG +IDY KLL + + R+++YT V E+Q
Sbjct: 19 RGRVAIFIDGSNLFYAALQLGIEIDYSKLLCHLTQGSRLFRSFFYTGVDPTNEKQ----Q 74
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
L W+ NG++VV+K + + G K K+++DVE+AVD + ++ SGDG
Sbjct: 75 GFLLWMRRNGYRVVSKELVQLPD--GSK--KANLDVEIAVDMMALVGCYDTAILVSGDGD 130
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
V A+ + +V +VS SM SD L AD ++DL ++ EI + P
Sbjct: 131 LAYAVDAVSYRGARVEVVSLR----SMTSDSLINVADRYIDLESIREEIQKAP 179
>gi|37521016|ref|NP_924393.1| hypothetical protein glr1447 [Gloeobacter violaceus PCC 7421]
gi|35212012|dbj|BAC89388.1| glr1447 [Gloeobacter violaceus PCC 7421]
Length = 190
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 92/167 (55%), Gaps = 10/167 (5%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
++++++FIDG N++ + ++ G+ D RK+L+ F ++ A++YT + DP+ Q
Sbjct: 7 QDRVSIFIDGNNMFYAQRSNGWFFDPRKVLEYFNRHEALVNAFWYTGI-RDPQDQ----R 61
Query: 65 PLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
D L GF V K KE+ + G K+++D+E+ VD F H V+FSGDG
Sbjct: 62 GFRDALIAMGFTVREKFLKEYYDRLSGEMTQKANLDIEIVVDMFNTVAQYNHAVLFSGDG 121
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
F V L+ K ++T+VST M + +LR AD ++DL L+
Sbjct: 122 DFERAVELLRSKDTRITVVST----EGMIARELRNAADRYIDLNDLR 164
>gi|221633438|ref|YP_002522663.1| hypothetical protein trd_1460 [Thermomicrobium roseum DSM 5159]
gi|221157206|gb|ACM06333.1| Protein of unknown function superfamily [Thermomicrobium roseum DSM
5159]
Length = 198
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 90/161 (55%), Gaps = 12/161 (7%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
+++A+F D +NLY ++ LG IDY +LL+ + ++ AY Y T+ G+ S P
Sbjct: 8 DRVAVFFDMSNLYFVARDLGVRIDYARLLEFLVAGRRLVCAYAYVTLAGEE----SSAVP 63
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
L WL NGF+VV + + ++ ++ +D+E+AVD Q+ ++ +V+ +GDG +
Sbjct: 64 FLTWLRRNGFRVVTRTLRRGSDGA----LRGDLDLEMAVDVLLQTPHVDVIVLVTGDGEY 119
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
LV +QR ++V I S P + +L ADY++DL
Sbjct: 120 CYLVETVQRLGRRVEIASA----PRNTAVELMELADYYVDL 156
>gi|300867847|ref|ZP_07112489.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
gi|300334178|emb|CBN57665.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
Length = 201
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 98/175 (56%), Gaps = 12/175 (6%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ + R ++A+FIDG+NL+ ++ LG +IDY KLL + + ++R+++YT V E+Q
Sbjct: 16 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTAGSRLLRSFFYTGVDRTNEKQ- 74
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L W+ NG++V++K + + G K K+++DVE+AVD + V+ S
Sbjct: 75 ---QGFLLWMRRNGYRVISKDLVQLPD--GSK--KANLDVEIAVDMMALVGSYDTAVLVS 127
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
GDG V A+ + +V +VS SM SD L AD ++DL +K +I +
Sbjct: 128 GDGDLAYAVDAVSYRGVRVEVVSL----RSMTSDSLINVADRYIDLESIKEDIQK 178
>gi|254424426|ref|ZP_05038144.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
gi|196191915|gb|EDX86879.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
Length = 211
Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 96/175 (54%), Gaps = 12/175 (6%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ + R ++A+FIDG+NL+ ++ LG +IDY KLL S + + R+++YT V E+Q
Sbjct: 19 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLSRLTSGSRLFRSFFYTGVDRSNEKQ- 77
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L W+ NG++V+AK + + G K K+++DVE+AVD + V+ S
Sbjct: 78 ---QGFLLWMRRNGYRVIAKDLVQLPD--GSK--KANLDVEIAVDMMALVGCYDTAVLVS 130
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
GDG V A K +V +VS +M SD L +D ++DL +K +I +
Sbjct: 131 GDGDLAYAVDAASYKGVRVEVVSL----RAMTSDSLINVSDRYIDLDSIKEDICK 181
>gi|170079300|ref|YP_001735938.1| hypothetical protein SYNPCC7002_A2707 [Synechococcus sp. PCC 7002]
gi|169886969|gb|ACB00683.1| conserved hypothetical protein [Synechococcus sp. PCC 7002]
Length = 204
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 97/175 (55%), Gaps = 12/175 (6%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++R+++YT V E+Q
Sbjct: 16 VLENRGRVAIFIDGSNLFYAALQLGIEIDYSKLLYRLTGGSRLLRSFFYTGVDRANEKQ- 74
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L W+ NG++V+AK + + G K K+++DVE+AVD + V+ S
Sbjct: 75 ---QGFLLWMRRNGYRVIAKDLVQLPD--GSK--KANLDVEIAVDMMALVGSYDTAVLVS 127
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
GDG V A+ + +V +VS SM SD L AD ++DL ++ +I +
Sbjct: 128 GDGDLAYAVDAVSYRGARVEVVSL----RSMTSDSLINVADRYIDLEQIQTDIQK 178
>gi|254421306|ref|ZP_05035024.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
gi|196188795|gb|EDX83759.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
Length = 328
Score = 89.0 bits (219), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 93/168 (55%), Gaps = 12/168 (7%)
Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
I +FIDG+NL+ ++ L ++DYR+LL + ++RAY+YT V E+Q L
Sbjct: 173 ITIFIDGSNLFYAASHLNIEVDYRRLLTSLVRGRRLLRAYFYTGVDPQNEKQ----RGFL 228
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTT 127
WL+ +G +V V+KE T N K++M VE+AVD SE ++ + GDG
Sbjct: 229 LWLNRHGHRV---VSKELT-NLPDGSRKANMHVEMAVDMMRISEYCSNITLLGGDG---N 281
Query: 128 LVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
L ALQ ++ T + V+S SM SD L AD + DLA L++ I R
Sbjct: 282 LAYALQVLSQRGTFIE-VVSLQSMTSDSLIDIADSYTDLADLRDRIKR 328
>gi|158335465|ref|YP_001516637.1| hypothetical protein AM1_2313 [Acaryochloris marina MBIC11017]
gi|158305706|gb|ABW27323.1| conserved hypothetical protein [Acaryochloris marina MBIC11017]
Length = 210
Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 96/175 (54%), Gaps = 12/175 (6%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ + R +IA+FIDG+NL+ ++ LG +IDY KLL + ++R+++YT V E+Q
Sbjct: 18 VLENRGRIAIFIDGSNLFYAALQLGIEIDYTKLLCRLTCGSRLLRSFFYTGVDPTNEKQ- 76
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L W+ NG++V+ K + + G K K+++DVE+AVD + ++ S
Sbjct: 77 ---QGFLLWMRRNGYRVITKELVQLPD--GSK--KANLDVEIAVDMMSLVGCYDTAILVS 129
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
GDG V A+ + +V +VS SM SD L AD ++DL +K +I +
Sbjct: 130 GDGDLAYAVDAVSYRGIRVEVVSL----RSMTSDSLINVADRYIDLEGIKGDIQK 180
>gi|75908331|ref|YP_322627.1| hypothetical protein Ava_2110 [Anabaena variabilis ATCC 29413]
gi|75702056|gb|ABA21732.1| Protein of unknown function DUF88 [Anabaena variabilis ATCC 29413]
Length = 173
Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 99/179 (55%), Gaps = 13/179 (7%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFR---SRAIVIRAYYYTTVVGDPE 57
M P ++++F+DG N++ + + G+ D R++L+ F+ S +I A++YT + DP+
Sbjct: 1 MGSPMNRLSIFVDGNNMFYAQQKNGWFFDPRRVLEYFKNEQSETTLINAFWYTGL-KDPQ 59
Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHL 116
Q D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +
Sbjct: 60 DQ----RGFRDALISLGYTVRTKILKEYYDDSSGRYSQKANLDIEIVVDMFNTVDQYDRV 115
Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
V+FSGDG F + L+ K +T+VST M + +LR D ++DL +++ I +
Sbjct: 116 VLFSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDRIEK 170
>gi|282896757|ref|ZP_06304763.1| Protein of unknown function DUF88 [Raphidiopsis brookii D9]
gi|281198166|gb|EFA73056.1| Protein of unknown function DUF88 [Raphidiopsis brookii D9]
Length = 173
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 100/179 (55%), Gaps = 13/179 (7%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSR---AIVIRAYYYTTVVGDPE 57
M P ++++F+DG N++ + + G+ D R++L+ F++ +I A++YT + DP+
Sbjct: 1 MVLPMSRLSIFVDGNNMFYAQQKNGWFFDPRRVLEYFKNEQPETTLINAFWYTGL-KDPQ 59
Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHL 116
Q D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +
Sbjct: 60 DQ----RGFRDALISLGYTVRTKILKEYYDDVSGRYSQKANLDIEIVVDMFNTVDQYDRV 115
Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
V+FSGDG F + L+ K +T+VST M + +LR D ++DL +K++I +
Sbjct: 116 VLFSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIKDQIEK 170
>gi|172036862|ref|YP_001803363.1| hypothetical protein cce_1947 [Cyanothece sp. ATCC 51142]
gi|171698316|gb|ACB51297.1| unknown [Cyanothece sp. ATCC 51142]
Length = 225
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 96/175 (54%), Gaps = 12/175 (6%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++RA++YT V E+Q
Sbjct: 41 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLYRLTEGSRLLRAFFYTGVDRTNEKQ- 99
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L W+ NG++V+AK + + G K K+++DVE+AVD + +I S
Sbjct: 100 ---QGFLLWMRRNGYRVIAKDLVQLPD--GSK--KANLDVEIAVDLMALVGSYDTAIIVS 152
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
GDG ++ + ++ +VS SM SD L AD ++DL +K +I +
Sbjct: 153 GDGDLAYAADSVSYRGARIEVVSL----RSMTSDSLINVADRYIDLDQIKEDIQK 203
>gi|126656216|ref|ZP_01727600.1| hypothetical protein CY0110_03999 [Cyanothece sp. CCY0110]
gi|126622496|gb|EAZ93202.1| hypothetical protein CY0110_03999 [Cyanothece sp. CCY0110]
Length = 225
Score = 88.2 bits (217), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 96/175 (54%), Gaps = 12/175 (6%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++RA++YT V E+Q
Sbjct: 41 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLYRLTEGSRLLRAFFYTGVDRTNEKQ- 99
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L W+ NG++V+AK + + G K K+++DVE+AVD + +I S
Sbjct: 100 ---QGFLLWMRRNGYRVIAKDLVQLPD--GSK--KANLDVEIAVDLMALVGSYDTAIIVS 152
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
GDG ++ + ++ +VS SM SD L AD ++DL +K +I +
Sbjct: 153 GDGDLAYAADSVSYRGARIEVVSL----RSMTSDSLINVADRYIDLDQIKEDIQK 203
>gi|282901769|ref|ZP_06309684.1| protein of unknown function DUF88 [Cylindrospermopsis raciborskii
CS-505]
gi|281193386|gb|EFA68368.1| protein of unknown function DUF88 [Cylindrospermopsis raciborskii
CS-505]
Length = 173
Score = 87.4 bits (215), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 100/179 (55%), Gaps = 13/179 (7%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSR---AIVIRAYYYTTVVGDPE 57
M P ++++F+DG N++ + + G+ D R++L+ F++ +I A++YT + DP+
Sbjct: 1 MVLPMSRLSIFVDGNNMFYAQQKNGWFFDPRRVLEYFKNEQPETTLINAFWYTGL-KDPQ 59
Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHL 116
Q D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +
Sbjct: 60 DQ----RGFRDALISLGYTVRTKILKEYYDDVSGRYSQKANLDIEIVVDMFNTVDQYDRV 115
Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
V+FSGDG F + L+ K +T+VST M + +LR D ++DL ++++I +
Sbjct: 116 VLFSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDQIEK 170
>gi|119511234|ref|ZP_01630350.1| hypothetical protein N9414_18593 [Nodularia spumigena CCY9414]
gi|119464112|gb|EAW45033.1| hypothetical protein N9414_18593 [Nodularia spumigena CCY9414]
Length = 173
Score = 87.4 bits (215), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 98/179 (54%), Gaps = 13/179 (7%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFR---SRAIVIRAYYYTTVVGDPE 57
M P ++++F+DG N++ + + G+ D R++L F+ S +I A++YT + DP+
Sbjct: 1 MGSPMNRLSIFVDGNNMFYAQQKNGWFFDPRRVLDYFKHEQSDTTLINAFWYTGL-KDPQ 59
Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHL 116
Q D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +
Sbjct: 60 DQ----RGFRDALISLGYTVRTKILKEYYDDSSGRYSQKANLDIEIVVDMFNTVDQYDRV 115
Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
V+FSGDG F + L+ K +T+VST M + +LR D ++DL +++ I +
Sbjct: 116 VLFSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDSIEK 170
>gi|282899662|ref|ZP_06307626.1| protein of unknown function DUF88 [Cylindrospermopsis raciborskii
CS-505]
gi|281195541|gb|EFA70474.1| protein of unknown function DUF88 [Cylindrospermopsis raciborskii
CS-505]
Length = 230
Score = 87.0 bits (214), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 92/172 (53%), Gaps = 12/172 (6%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
R ++A+FIDG NL+ ++ +G +IDY KLL + ++RA++YT V E+Q
Sbjct: 56 RGRVAIFIDGLNLFHAALQIGIEIDYVKLLCRLTQTSRLLRAFFYTGVDTSKEKQ----Q 111
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
L W+ NG++VV K TE+ G+ K +++VE+AVD + + V+ SGDG
Sbjct: 112 GFLLWMRRNGYRVVTKDIIALTES-GK---KPNLNVEIAVDMITLAPYYDTAVLVSGDGD 167
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
V A+ +V ++ +M SD L ADYF+D +K I +D
Sbjct: 168 LAYAVNAVTSLGSRVEVIGL----QTMTSDSLIDVADYFIDFDSIKQYIQKD 215
>gi|298491324|ref|YP_003721501.1| hypothetical protein Aazo_2466 ['Nostoc azollae' 0708]
gi|298233242|gb|ADI64378.1| protein of unknown function DUF88 ['Nostoc azollae' 0708]
Length = 228
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 90/172 (52%), Gaps = 12/172 (6%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
R ++A+FIDG NL+ ++ LG +IDY KLL + ++RA++YT V E+Q
Sbjct: 54 RGRVAIFIDGLNLFHAALQLGIEIDYVKLLCRLTQSSRLLRAFFYTGVDASKEKQ----Q 109
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
L W+ NG++VV K EN G+ K +++VE+A+D + + V+ SGDG
Sbjct: 110 GFLLWMRRNGYRVVTKDILAVAEN-GK---KPNLNVEIAIDMITLAPYYDTAVLVSGDGD 165
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
V A+ +V ++ + SD L ADYF+D +K I +D
Sbjct: 166 LAYAVNAVSSLGSRVEVIGL----QTTTSDTLINVADYFIDFDSVKQHIQKD 213
>gi|209528287|ref|ZP_03276748.1| protein of unknown function DUF88 [Arthrospira maxima CS-328]
gi|284053607|ref|ZP_06383817.1| hypothetical protein AplaP_19301 [Arthrospira platensis str.
Paraca]
gi|209491273|gb|EDZ91667.1| protein of unknown function DUF88 [Arthrospira maxima CS-328]
gi|291565674|dbj|BAI87946.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 173
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 99/179 (55%), Gaps = 13/179 (7%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA---IVIRAYYYTTVVGDPE 57
M + R ++++F+DG N++ + + G+ D R++L F+ I I A++YT + DP+
Sbjct: 1 MPNLRNRLSIFVDGNNMFYAQQKNGWFFDPRRVLDYFKHEQADLIFINAFWYTGL-KDPQ 59
Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHL 116
Q D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +
Sbjct: 60 DQ----RGFRDALISLGYTVRTKILKEYYDDSSGRYSQKANLDIEIVVDMFNTVDQYDRV 115
Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
V+FSGDG F + L+ K +T+VST M + +LR D ++DL ++++I +
Sbjct: 116 VLFSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDQIEK 170
>gi|17232221|ref|NP_488769.1| hypothetical protein all4729 [Nostoc sp. PCC 7120]
gi|75908164|ref|YP_322460.1| hypothetical protein Ava_1943 [Anabaena variabilis ATCC 29413]
gi|17133866|dbj|BAB76428.1| all4729 [Nostoc sp. PCC 7120]
gi|75701889|gb|ABA21565.1| Protein of unknown function DUF88 [Anabaena variabilis ATCC 29413]
Length = 236
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 96/183 (52%), Gaps = 26/183 (14%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTV-----------V 53
R ++A+FIDGANL+ ++ LG +IDY KLL + + ++RA++YT V
Sbjct: 54 RGRVAIFIDGANLFQAALQLGIEIDYLKLLCRLTAGSRLLRAFFYTGVDMSRPTPTRQRT 113
Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGL 113
D +Q F L W+ NG++VV K + T+N K +++VE+AVD +
Sbjct: 114 NDKQQGF------LFWMRRNGYRVVTK-ELQVTDN----NKKPNLNVEIAVDMITLAPHY 162
Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
+ V+ SGDG V A+ +V +VS +M +D L ADYF+DL +K I
Sbjct: 163 DTAVLVSGDGDLAYAVNAVSSTGVRVEVVSL----RTMTNDCLIDVADYFIDLDSIKQYI 218
Query: 174 ARD 176
+D
Sbjct: 219 QKD 221
>gi|113475474|ref|YP_721535.1| hypothetical protein Tery_1805 [Trichodesmium erythraeum IMS101]
gi|110166522|gb|ABG51062.1| protein of unknown function DUF88 [Trichodesmium erythraeum IMS101]
Length = 204
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 97/175 (55%), Gaps = 12/175 (6%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++R+++YT V E+Q
Sbjct: 20 ILENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRSFFYTGVDRTNEKQ- 78
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L W+ NG++V++K + + G K K+++DVE+AVD + ++ S
Sbjct: 79 ---QGFLLWMRRNGYRVISKDLVQLPD--GSK--KANLDVEIAVDMMALVGSYDTAILVS 131
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
GDG V A+ + +V +VS +M SD L +D ++DL +K +I +
Sbjct: 132 GDGDLAYAVDAVSYRGVRVEVVSL----RAMTSDSLINVSDRYIDLEQIKEDIQK 182
>gi|186681406|ref|YP_001864602.1| hypothetical protein Npun_F0925 [Nostoc punctiforme PCC 73102]
gi|186463858|gb|ACC79659.1| protein of unknown function DUF88 [Nostoc punctiforme PCC 73102]
Length = 169
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 98/173 (56%), Gaps = 13/173 (7%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFR---SRAIVIRAYYYTTVVGDPEQQFSPL 63
++++F+DG N++ + + G+ D R++L+ F+ S +I A++YT + DP+ Q
Sbjct: 3 RLSIFVDGNNMFYAQQKNGWFFDPRRVLEYFKHEQSETTLINAFWYTGL-KDPQDQ---- 57
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +V+FSGD
Sbjct: 58 RGFRDALISLGYTVRTKILKEYYDDTSGRYSQKANLDIEIVVDMFNTVDQYDRVVLFSGD 117
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
G F + L+ K +T+VST M + +LR D ++DL ++++I +
Sbjct: 118 GDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDQIEK 166
>gi|220910043|ref|YP_002485354.1| hypothetical protein Cyan7425_4688 [Cyanothece sp. PCC 7425]
gi|219866654|gb|ACL46993.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7425]
Length = 172
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 95/172 (55%), Gaps = 12/172 (6%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIV--IRAYYYTTVVGDPEQQFSPLH 64
++++F+DG N++ + + G+ D R++L F S V + A++YT + DP+ Q
Sbjct: 7 RVSIFVDGNNMFYAQQKNGWFFDPRRVLDYFTSEPSVTLVNAFWYTGL-KDPQDQ----R 61
Query: 65 PLLDWLHYNGFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
D L G+ V K+ KE+ +N GR K+++D+E+ VD F E + +++FSGDG
Sbjct: 62 GFRDALISLGYTVRTKILKEYYDDNSGRYSQKANLDIEIVVDMFNTVEQYDRVILFSGDG 121
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
F + L+ K +T+VST M + +LR D ++DL ++ +I +
Sbjct: 122 DFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRPKIEK 169
>gi|218440568|ref|YP_002378897.1| hypothetical protein PCC7424_3645 [Cyanothece sp. PCC 7424]
gi|218173296|gb|ACK72029.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7424]
Length = 180
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 98/175 (56%), Gaps = 12/175 (6%)
Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIV--IRAYYYTTVVGDPEQQFS 61
P++++++F+DG N++ + + G+ D R++L+ F + V I A++YT + +Q+
Sbjct: 12 PKDRLSIFVDGNNMFYAQQKNGWFFDPRRVLEYFTNDPTVNLINAFWYTGLKDSQDQR-- 69
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +++FS
Sbjct: 70 ---GFRDALISLGYTVRTKILKEYYDDSSGRYSQKANLDIEIVVDMFNTVDQYDRVILFS 126
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
GDG F + L+ K +T+VST M + +LR D ++DL ++N I +
Sbjct: 127 GDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRNFIEK 177
>gi|166368642|ref|YP_001660915.1| hypothetical protein MAE_59010 [Microcystis aeruginosa NIES-843]
gi|159030407|emb|CAO91305.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|166091015|dbj|BAG05723.1| hypothetical protein MAE_59010 [Microcystis aeruginosa NIES-843]
Length = 183
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 98/175 (56%), Gaps = 12/175 (6%)
Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRS--RAIVIRAYYYTTVVGDPEQQFS 61
P++++++F+DG N++ + + G+ D RK+L F + ++I A++YT + +Q+
Sbjct: 15 PKDRLSIFVDGNNMFYAQQKNGWFFDPRKVLNYFTNDPNIMLINAFWYTGLKDSQDQR-- 72
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +++FS
Sbjct: 73 ---GFRDALISLGYTVRTKILKEYYDDSSGRFSQKANLDIEIVVDMFNTVDQYDRVILFS 129
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
GDG F + L+ K +T+VST M + +LR D ++DL ++ +I +
Sbjct: 130 GDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRKDIEK 180
>gi|332711770|ref|ZP_08431701.1| hypothetical protein LYNGBM3L_65720 [Lyngbya majuscula 3L]
gi|332349748|gb|EGJ29357.1| hypothetical protein LYNGBM3L_65720 [Lyngbya majuscula 3L]
Length = 165
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 96/171 (56%), Gaps = 12/171 (7%)
Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRA--IVIRAYYYTTVVGDPEQQFSPLHP 65
+++F+DG N++ + + G+ D R++L F++ ++ A++YT + DP+ Q
Sbjct: 1 MSIFVDGNNMFYAQQKNGWFFDPRRVLDYFKNEPGITLVNAFWYTGL-KDPQDQ----RG 55
Query: 66 LLDWLHYNGFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
D L G+ V K+ KE+ +N GR K+++D+E+ VD F E + +++FSGDG
Sbjct: 56 FRDALISLGYTVRTKILKEYYDDNSGRYSQKANLDIEIVVDMFNTVEQYDKVILFSGDGD 115
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
F + L+ K +T+VST M + +LR D ++DL ++++I +
Sbjct: 116 FERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDVRDQIEK 162
>gi|254413060|ref|ZP_05026832.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
gi|196180224|gb|EDX75216.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
Length = 172
Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 97/173 (56%), Gaps = 12/173 (6%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA--IVIRAYYYTTVVGDPEQQFSPL 63
+I++F+DG N++ + + G+ D +++L+ FR +++ A++YT + DP+ Q
Sbjct: 6 NRISIFVDGNNMFYAQQKNGWFFDPKRVLEYFRKEPHIVLVNAFWYTGL-KDPQDQ---- 60
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
D L G+ V K+ KE+ ++ GR K+++D+E+ VD F E + +++FSGD
Sbjct: 61 RGFRDALISLGYTVRTKILKEYYDDSSGRYSQKANLDIEIVVDMFNTVEQYDRVILFSGD 120
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
G F + L+ K +T+VST M + +LR D ++DL +++ I +
Sbjct: 121 GDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDYIEK 169
>gi|298492621|ref|YP_003722798.1| hypothetical protein Aazo_4322 ['Nostoc azollae' 0708]
gi|298234539|gb|ADI65675.1| protein of unknown function DUF88 ['Nostoc azollae' 0708]
Length = 173
Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 98/173 (56%), Gaps = 13/173 (7%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSR---AIVIRAYYYTTVVGDPEQQFSPL 63
++++F+DG N++ + + G+ D R++L+ F++ +I A++YT + DP+ Q
Sbjct: 7 RLSIFVDGNNMFYAQQKNGWFFDPRRVLEYFKNEQPETTLINAFWYTGL-KDPQDQ---- 61
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +V+FSGD
Sbjct: 62 RGFRDALISLGYTVRTKILKEYYDDVSGRYSQKANLDIEIVVDMFNTVDQYDRVVLFSGD 121
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
G F + L+ K +T+VST M + +LR D ++DL ++++I +
Sbjct: 122 GDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDQIEK 170
>gi|56752213|ref|YP_172914.1| hypothetical protein syc2204_c [Synechococcus elongatus PCC 6301]
gi|81300700|ref|YP_400908.1| hypothetical protein Synpcc7942_1891 [Synechococcus elongatus PCC
7942]
gi|56687172|dbj|BAD80394.1| hypothetical protein [Synechococcus elongatus PCC 6301]
gi|81169581|gb|ABB57921.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942]
gi|121309776|dbj|BAF44194.1| LabA [Synechococcus elongatus PCC 7942]
Length = 186
Score = 84.3 bits (207), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 95/173 (54%), Gaps = 13/173 (7%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIV--IRAYYYTTVVGDPEQQFSPLH 64
++A+FIDG N++ + + G+ D R++L F +R + + AY+YT + DP+ Q
Sbjct: 7 RLAIFIDGNNMFYAQQKNGWFFDPRRVLNYFANRPEIELVNAYWYTGL-KDPQDQ----R 61
Query: 65 PLLDWLHYNGFQVVAKVAKEFTE--NCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
D L G+ V K+ KEF + N R ++++D+E+ +D F E + +V+FSGD
Sbjct: 62 GFRDALVSLGYTVRTKMLKEFHDESNGNRYFQRANLDIEIVIDMFNTVEQYDEIVLFSGD 121
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
G F + L+ K +T+VST M + +LR D ++DL +++ I +
Sbjct: 122 GDFERAIELLRAKQTHITVVST----DGMIARELRNATDRYIDLNDIRSFIEK 170
>gi|157273336|gb|ABV27235.1| RtsE [Candidatus Chloracidobacterium thermophilum]
Length = 332
Score = 84.0 bits (206), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 94/173 (54%), Gaps = 12/173 (6%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
R ++A+FIDG NL+ ++++ G +IDY KLL R ++RA++YT V +QQ
Sbjct: 22 RGRVAIFIDGNNLFHAARSAGVEIDYAKLLAYLRGDDPLLRAFFYTGV----DQQAERQQ 77
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
L W+ NG++VV K K F + G K K+++DVE+AVD ++ + ++ SGD
Sbjct: 78 GFLLWMRRNGYRVVQKELKTFPD--GTK--KANLDVEIAVDMLSLADKYDTAILVSGDED 133
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
FT + + K +V + + S +L AD F +L + EI++ P
Sbjct: 134 FTYALNVIAYKGVRVEVAGFRAN----TSPRLIDVADRFHELDSVLAEISKSP 182
>gi|86607567|ref|YP_476329.1| hypothetical protein CYB_0065 [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86556109|gb|ABD01066.1| conserved hypothetical protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 175
Score = 84.0 bits (206), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 91/167 (54%), Gaps = 13/167 (7%)
Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAF-RSRAIV--IRAYYYTTVVGDPEQQF 60
P ++++FIDG N++ + + G+ D R++L F RS+ V + A++YT + DP Q
Sbjct: 6 PVTRVSIFIDGNNMFYAQQKNGWFFDPRRVLDYFVRSQPNVELVNAFWYTGI-KDPHDQ- 63
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFT-ENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119
D L GF V K+ KE+ E+ GR K+++D+E+ +D F + +++F
Sbjct: 64 ---RAFRDALISMGFTVRTKILKEYRDEDSGRYSQKANLDIEIVIDMFNTVGQYDRIILF 120
Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
SGDG F V L+ K +T+VST M + +LR D ++DL
Sbjct: 121 SGDGDFERAVELLRSKNTLITVVST----EGMIARELRNATDRYIDL 163
>gi|86605299|ref|YP_474062.1| hypothetical protein CYA_0583 [Synechococcus sp. JA-3-3Ab]
gi|86553841|gb|ABC98799.1| conserved hypothetical protein [Synechococcus sp. JA-3-3Ab]
Length = 174
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 91/167 (54%), Gaps = 13/167 (7%)
Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAF-RSRAIV--IRAYYYTTVVGDPEQQF 60
P ++++FIDG N++ + + G+ D R++L F RS+ V + A++YT + DP Q
Sbjct: 5 PVTRVSIFIDGNNMFYAQQKNGWFFDPRRVLDYFVRSQPNVELVNAFWYTGI-KDPNDQ- 62
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFT-ENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119
D L GF V K+ KE+ E+ GR K+++D+E+ +D F + +++F
Sbjct: 63 ---RAFRDALISLGFTVRTKILKEYRDEDSGRYSQKANLDIEIVIDMFNTVGQYDRIILF 119
Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
SGDG F V L+ K +T+VST M + +LR D ++DL
Sbjct: 120 SGDGDFERAVELLRSKNTLITVVST----EGMIARELRNATDRYIDL 162
>gi|113477728|ref|YP_723789.1| hypothetical protein Tery_4322 [Trichodesmium erythraeum IMS101]
gi|110168776|gb|ABG53316.1| protein of unknown function DUF88 [Trichodesmium erythraeum IMS101]
Length = 171
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 96/171 (56%), Gaps = 11/171 (6%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAI-VIRAYYYTTVVGDPEQQFSPLHP 65
++++F+DG N++ + + G+ D R++L+ F + +I A++YT + DP+ Q
Sbjct: 7 RLSIFVDGNNMFYAQQKNGWFFDPRRVLEYFNKPEVKLINAFWYTGL-KDPQDQ----RG 61
Query: 66 LLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +V+FSGDG
Sbjct: 62 FRDALISLGYTVRTKILKEYYDDVSGRYSQKANLDIEIVVDMFNTVDQYDEVVLFSGDGD 121
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
F + L+ K +T+VST M + +LR D ++DL ++ +I +
Sbjct: 122 FERAIELLRSKNTHITVVST----EGMIARELRNATDQYVDLNDIRYQIEK 168
>gi|307153372|ref|YP_003888756.1| hypothetical protein Cyan7822_3539 [Cyanothece sp. PCC 7822]
gi|306983600|gb|ADN15481.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7822]
Length = 180
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 96/175 (54%), Gaps = 12/175 (6%)
Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIV--IRAYYYTTVVGDPEQQFS 61
P++++++F+DG N++ + + G+ D R++L F + V I A++YT + +Q+
Sbjct: 12 PKDRLSIFVDGNNMFYAQQKNGWFFDPRRVLDHFTNDPTVTLINAFWYTGLKDSQDQR-- 69
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +++FS
Sbjct: 70 ---GFRDALISLGYTVRTKILKEYYDDSSGRYSQKANLDIEIVVDMFNTVDQYDRVILFS 126
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
GDG F + L+ K +T+VST M + +LR D ++DL ++ I +
Sbjct: 127 GDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRTFIEK 177
>gi|67925984|ref|ZP_00519254.1| Protein of unknown function DUF88 [Crocosphaera watsonii WH 8501]
gi|67852173|gb|EAM47662.1| Protein of unknown function DUF88 [Crocosphaera watsonii WH 8501]
Length = 178
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 96/174 (55%), Gaps = 12/174 (6%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRS--RAIVIRAYYYTTVVGDPEQQFSP 62
+E++++F+DG N++ + + G+ D R++L F + +I A++YT + +Q+
Sbjct: 11 KERLSIFVDGNNMFYAQQKNGWFFDPRRVLDYFTNDPHVSLINAFWYTGLKDSQDQR--- 67
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +++FSG
Sbjct: 68 --GFRDALISLGYTVRTKILKEYYDDTSGRYSQKANLDIEIVVDMFNTVDQYDRVILFSG 125
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
DG F + L+ K +T+VST M + +LR D ++DL +K+ I +
Sbjct: 126 DGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIKDSIEK 175
>gi|172038230|ref|YP_001804731.1| hypothetical protein cce_3317 [Cyanothece sp. ATCC 51142]
gi|171699684|gb|ACB52665.1| unknown [Cyanothece sp. ATCC 51142]
Length = 178
Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 96/174 (55%), Gaps = 12/174 (6%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRS--RAIVIRAYYYTTVVGDPEQQFSP 62
+E++++F+DG N++ + + G+ D R++L F + +I A++YT + +Q+
Sbjct: 11 KERLSIFVDGNNMFYAQQKNGWFFDPRRVLDYFTNDPHVSLINAFWYTGLKDSQDQR--- 67
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +++FSG
Sbjct: 68 --GFRDALISLGYTVRTKILKEYYDDTSGRYSQKANLDIEIVVDMFNTVDQYDRVILFSG 125
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
DG F + L+ K +T+VST M + +LR D ++DL +K+ I +
Sbjct: 126 DGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIKDSIEK 175
>gi|218246675|ref|YP_002372046.1| hypothetical protein PCC8801_1847 [Cyanothece sp. PCC 8801]
gi|257059717|ref|YP_003137605.1| hypothetical protein Cyan8802_1873 [Cyanothece sp. PCC 8802]
gi|218167153|gb|ACK65890.1| protein of unknown function DUF88 [Cyanothece sp. PCC 8801]
gi|256589883|gb|ACV00770.1| protein of unknown function DUF88 [Cyanothece sp. PCC 8802]
Length = 178
Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 96/175 (54%), Gaps = 12/175 (6%)
Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIV--IRAYYYTTVVGDPEQQFS 61
P+E++++F+DG N++ + + + D R++L+ F + + + A++YT + +Q+
Sbjct: 10 PKERLSIFVDGNNMFYAQQKNSWFFDPRRVLEYFTNDPTITLVNAFWYTGLKDSQDQR-- 67
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +++FS
Sbjct: 68 ---GFRDALISLGYTVRTKILKEYYDDTSGRYSQKANLDIEIVVDMFNTVDQYDRVILFS 124
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
GDG F + L+ K +T+VST M + +LR D ++DL ++ I +
Sbjct: 125 GDGDFERAIELLRSKSTHITVVST----EGMIARELRNATDRYIDLNDIRPHIEK 175
>gi|22298340|ref|NP_681587.1| hypothetical protein tll0798 [Thermosynechococcus elongatus BP-1]
gi|22294519|dbj|BAC08349.1| tll0798 [Thermosynechococcus elongatus BP-1]
Length = 176
Score = 80.5 bits (197), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 98/176 (55%), Gaps = 16/176 (9%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRS--RAIVIRAYYYTTVVGDPEQ 58
M +E++++FIDG N++ + + G+ D R++L+ F + +++ A++YT + D +
Sbjct: 1 MLPAQERLSIFIDGNNMFYAQQKNGWFFDPRRVLEFFTRDPKIVLVNAFWYTGL-KDMQD 59
Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHLV 117
Q S L++ G+ V K+ KE+ E+ G+ K+++D+E+ +D F + +V
Sbjct: 60 QRSFRDALINL----GYTVRTKLLKEYYDESLGKYYQKANLDIEIVIDMFNTVGQYDRVV 115
Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
+FSGDG F + L+ K +T+VST M + +LR D ++DL NEI
Sbjct: 116 LFSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDL----NEI 163
>gi|170077971|ref|YP_001734609.1| hypothetical protein SYNPCC7002_A1357 [Synechococcus sp. PCC 7002]
gi|169885640|gb|ACA99353.1| Protein of unknown function (PF01936) [Synechococcus sp. PCC 7002]
Length = 172
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 93/174 (53%), Gaps = 12/174 (6%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIV--IRAYYYTTVVGDPEQQFSP 62
+ ++++F+DG N++ + + + D R++L F V I A++YT + +Q+
Sbjct: 5 QRRLSIFVDGNNMFYAQQKNNWFFDPRRVLDYFTCDPTVRLINAFWYTGLKDSQDQR--- 61
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +++FSG
Sbjct: 62 --GFRDALISLGYTVRTKILKEYYDDVSGRYSQKANLDIEIVVDMFNTVDQYDQVILFSG 119
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
DG F + L+ K +T+VST M + +LR D ++DL L+ EI +
Sbjct: 120 DGDFERAIELLRSKNTHITVVST----EGMIARELRNATDCYIDLNNLRAEIEK 169
>gi|218290176|ref|ZP_03494335.1| protein of unknown function DUF88 [Alicyclobacillus acidocaldarius
LAA1]
gi|258512267|ref|YP_003185701.1| hypothetical protein Aaci_2303 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|218239771|gb|EED06961.1| protein of unknown function DUF88 [Alicyclobacillus acidocaldarius
LAA1]
gi|257478993|gb|ACV59312.1| protein of unknown function DUF88 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 168
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 92/171 (53%), Gaps = 9/171 (5%)
Query: 7 KIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
+++LF+DGAN Y + L + ID +KLL+ +S+ ++ A+YY +G
Sbjct: 2 RVSLFVDGANYYYMQRDKLKWTIDAQKLLEWAKSKGELVDAFYY---IGRSSPSDVREQK 58
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
LD L Y+G+ +V K KE + G K+++D+E+ +D F E + ++ SGDG F
Sbjct: 59 YLDMLAYSGYSIVTKDIKEIVQEDGSITRKANLDIEIVLDMFNTIENYDMAILVSGDGDF 118
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD-YFMDLAYLKNEIAR 175
+ L+ + KK ++ST + +LR A +F+D+ L++++ R
Sbjct: 119 ERALQLLRARGKKFIVLST----AGFIASELRMVAGMHFIDVNTLRDQLER 165
>gi|158333892|ref|YP_001515064.1| hypothetical protein AM1_0704 [Acaryochloris marina MBIC11017]
gi|158304133|gb|ABW25750.1| conserved hypothetical protein [Acaryochloris marina MBIC11017]
Length = 172
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 92/173 (53%), Gaps = 12/173 (6%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIV--IRAYYYTTVVGDPEQQFSPL 63
+ ++F+DG N++ + + G+ D R++L F V I A++YT + DP+ Q
Sbjct: 6 NRTSIFVDGNNMFYAQQKNGWFFDPRRILNYFTEPTDVRLINAFWYTGL-KDPQDQ---- 60
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
D L G+ V K+ KE+ ++ GR K+++D+E+ +D F + + +++ SGD
Sbjct: 61 RGFRDALISLGYTVRTKILKEYYDDSSGRYSQKANLDIEIVIDMFNTVDQYDQVILLSGD 120
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
G F + L+ K +T+VST M + +LR D ++DL +++ I +
Sbjct: 121 GDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNKIRDRIEK 169
>gi|194335638|ref|YP_002017432.1| protein of unknown function DUF88 [Pelodictyon phaeoclathratiforme
BU-1]
gi|194308115|gb|ACF42815.1| protein of unknown function DUF88 [Pelodictyon phaeoclathratiforme
BU-1]
Length = 287
Score = 78.2 bits (191), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 92/178 (51%), Gaps = 27/178 (15%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTV---VGDPEQQFSPL 63
+ A+FIDGANL+ + + LG+ ID+ +L+ F S + A YY V + F+ +
Sbjct: 10 RAAVFIDGANLFYTQRHLGWQIDFSRLMAFFISGYATVEANYYVPASEPVSEENAAFTRV 69
Query: 64 HPLLDWLHYNGFQVVAK-VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
L +G+ + +K V K + G +K ++DVEL VDA +++ + ++FSGD
Sbjct: 70 ------LMAHGYHITSKPVKKIVNKETGVIVMKGNLDVELVVDALSRADQYDTFILFSGD 123
Query: 123 GCFTTLVAALQRKVKKVTIVST-------VLSDPSMASDQLRRQADYFMDLAYLKNEI 173
F L+ AL+ K K+V + ST +L++P +A + DLA LK I
Sbjct: 124 SDFIPLLRALKEKGKEVLVYSTQGLSARELLAEPGIA----------YHDLALLKERI 171
>gi|16332216|ref|NP_442944.1| hypothetical protein slr0755 [Synechocystis sp. PCC 6803]
gi|1653846|dbj|BAA18756.1| slr0755 [Synechocystis sp. PCC 6803]
Length = 185
Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 94/174 (54%), Gaps = 12/174 (6%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIV--IRAYYYTTVVGDPEQQFSP 62
R+++++F+DG N++ + + G+ D R++L F V + A++YT + +Q+
Sbjct: 11 RDRLSIFVDGNNMFYAQQKNGWFFDPRRVLSFFTEDPSVKLVNAFWYTGLKDTQDQR--- 67
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
D L G+ V K+ KE+ ++ G+ K+++D+E+ VD F + + +V+FSG
Sbjct: 68 --GFRDALISLGYTVRTKILKEYYDDISGKYSQKANLDIEIVVDMFNTVDQYDRVVLFSG 125
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
DG F + L+ K +T+VST M + +LR D ++DL ++ I +
Sbjct: 126 DGDFERAIELLRSKSTHITVVST----EGMIARELRNATDRYIDLNDIRPAIEK 175
>gi|110597861|ref|ZP_01386144.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031]
gi|110340586|gb|EAT59069.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031]
Length = 280
Score = 77.4 bits (189), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 94/174 (54%), Gaps = 15/174 (8%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTV---VGDPEQQFSPL 63
+ A+FIDGANL+ + + LG+ ID+ +L+ F + + A YY V + F+ +
Sbjct: 3 RAAVFIDGANLFYTQRHLGWQIDFSRLMAFFMTGYASVEANYYVPASEPVSEENAAFTRV 62
Query: 64 HPLLDWLHYNGFQVVAK-VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
L +G+++++K V K + G +K ++DVEL VDA SE + ++FSGD
Sbjct: 63 ------LTAHGYRIISKPVKKIVNKETGEVIMKGNLDVELVVDALIGSEHYDTFILFSGD 116
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY-FMDLAYLKNEIAR 175
F L+ AL+ K K+V + ST +++ +L + + + DL+ L++ I
Sbjct: 117 SDFLPLLRALKEKGKEVIVYST----QGLSARELLAEPNVTYFDLSLLRDRIGH 166
>gi|119356319|ref|YP_910963.1| hypothetical protein Cpha266_0482 [Chlorobium phaeobacteroides DSM
266]
gi|119353668|gb|ABL64539.1| protein of unknown function DUF88 [Chlorobium phaeobacteroides DSM
266]
Length = 287
Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 90/171 (52%), Gaps = 7/171 (4%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
++ A++IDGANL+ + ++LG+ ID+ +L+ F R + A YY V ++ +
Sbjct: 4 KRAAVYIDGANLFFTQRSLGWQIDFSRLITFFLDRYASVEARYYVPVSEPASEEQAAFTR 63
Query: 66 LLDWLHYNGFQVVAK-VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
+L +G+ + +K V K + G +K ++DVELAVDA + ++FSGD
Sbjct: 64 VLA---AHGYILTSKPVKKIVNKTTGEIIIKGNLDVELAVDALVGEIAYDTFILFSGDSD 120
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
F L+ AL+ K K+V + ST + A + L F DLA L++ I
Sbjct: 121 FLPLLRALKEKGKEVLVYST---EGISAWELLIEPGIDFHDLAGLRDRIGH 168
>gi|307305137|ref|ZP_07584886.1| protein of unknown function DUF88 [Sinorhizobium meliloti BL225C]
gi|306902477|gb|EFN33072.1| protein of unknown function DUF88 [Sinorhizobium meliloti BL225C]
Length = 92
Score = 74.7 bits (182), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 54/87 (62%), Gaps = 4/87 (4%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFD REKIAL +DG NLYA+SKALGFDIDY KLL+AFR RA ++R T P
Sbjct: 1 MFDHREKIALLMDGPNLYAASKALGFDIDYCKLLEAFRKRAYLLRGQLLRTFGRRPGNAD 60
Query: 61 SPL-HPL--LDWLHYNGFQVVAKVAKE 84
PL H L L W+ +G Q ++ +
Sbjct: 61 DPLAHRLARLQWI-PDGHQADQRIHRH 86
>gi|319959094|gb|ADV90711.1| LabA [Nostoc linckia NK105]
Length = 160
Score = 73.9 bits (180), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 82/154 (53%), Gaps = 12/154 (7%)
Query: 24 LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAK 83
LG +IDY KLL + ++RA++YT V E+Q L W+ NG++V+AK
Sbjct: 3 LGIEIDYTKLLCRLTGGSRLLRAFFYTGVDRTNEKQ----QGFLLWMRRNGYRVIAKDLV 58
Query: 84 EFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS 143
+ + G K K+++DVE+AVD + + V+ SGDG V ++ + +V +VS
Sbjct: 59 QLPD--GSK--KANLDVEIAVDMMALVDSYDTAVLVSGDGDLAYAVNSVSYRGVRVEVVS 114
Query: 144 TVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
SM SD L +D ++DL +K +I + P
Sbjct: 115 L----RSMTSDSLINVSDRYLDLEAIKEDIQKTP 144
>gi|254787275|ref|YP_003074704.1| hypothetical protein TERTU_3357 [Teredinibacter turnerae T7901]
gi|237685617|gb|ACR12881.1| conserved hypothetical protein [Teredinibacter turnerae T7901]
Length = 258
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 89/178 (50%), Gaps = 15/178 (8%)
Query: 7 KIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE----QQFS 61
K +F+D NL + + FD+ RKL++A V+RA Y V E +
Sbjct: 3 KAGIFLDMENLNMNGGWGMRFDV-IRKLVEA--QGTTVLRANVYIAVDNAREKYDFEYRE 59
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
D + GF +V K + FT G + +K++ D++LAVDA Q+E L+++++ +G
Sbjct: 60 KAQARRDKMRLAGFHIVEKEIRRFTNADGTQNIKANADLDLAVDAMLQAENLDYILLGTG 119
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN--EIARDP 177
DG F LV ALQ K K+V V+ S +LRR+ DY+ A + I DP
Sbjct: 120 DGDFLRLVRALQSKGKRVDAVAI-----HNVSGELRREVDYYFHGATIPGLLPIKNDP 172
>gi|319959046|gb|ADV90687.1| LabA [Nostoc linckia EC102]
gi|319959048|gb|ADV90688.1| LabA [Nostoc linckia EC105]
gi|319959050|gb|ADV90689.1| LabA [Nostoc linckia EC106]
gi|319959052|gb|ADV90690.1| LabA [Nostoc linckia EC109]
gi|319959054|gb|ADV90691.1| LabA [Nostoc linckia EC113]
gi|319959056|gb|ADV90692.1| LabA [Nostoc linckia EC119]
gi|319959058|gb|ADV90693.1| LabA [Nostoc linckia EC121]
gi|319959060|gb|ADV90694.1| LabA [Nostoc linckia EC205]
gi|319959062|gb|ADV90695.1| LabA [Nostoc linckia EC206]
gi|319959064|gb|ADV90696.1| LabA [Nostoc linckia EC220]
gi|319959066|gb|ADV90697.1| LabA [Nostoc linckia EC221]
gi|319959068|gb|ADV90698.1| LabA [Nostoc linckia EC222]
gi|319959070|gb|ADV90699.1| LabA [Nostoc linckia EC326]
gi|319959072|gb|ADV90700.1| LabA [Nostoc linckia NK217]
gi|319959074|gb|ADV90701.1| LabA [Nostoc linckia EC501]
gi|319959076|gb|ADV90702.1| LabA [Nostoc linckia EC505]
gi|319959078|gb|ADV90703.1| LabA [Nostoc linckia EC519]
gi|319959080|gb|ADV90704.1| LabA [Nostoc linckia EC521]
gi|319959082|gb|ADV90705.1| LabA [Nostoc linckia EC602]
gi|319959084|gb|ADV90706.1| LabA [Nostoc linckia EC724]
gi|319959086|gb|ADV90707.1| LabA [Nostoc linckia EC204]
gi|319959090|gb|ADV90709.1| LabA [Nostoc linckia EC210]
gi|319959092|gb|ADV90710.1| LabA [Nostoc linckia EC322]
gi|319959096|gb|ADV90712.1| LabA [Nostoc linckia NK207]
gi|319959098|gb|ADV90713.1| LabA [Nostoc linckia EC703]
gi|319959100|gb|ADV90714.1| LabA [Nostoc linckia EC720]
Length = 173
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 82/154 (53%), Gaps = 12/154 (7%)
Query: 24 LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAK 83
LG +IDY KLL + ++RA++YT V E+Q L W+ NG++V+AK
Sbjct: 3 LGIEIDYTKLLCRLTGGSRLLRAFFYTGVDRTNEKQ----QGFLLWMRRNGYRVIAKDLV 58
Query: 84 EFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS 143
+ + G K K+++DVE+AVD + + V+ SGDG V ++ + +V +VS
Sbjct: 59 QLPD--GSK--KANLDVEIAVDMMALVDSYDTAVLVSGDGDLAYAVNSVSYRGVRVEVVS 114
Query: 144 TVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
SM SD L +D ++DL +K +I + P
Sbjct: 115 L----RSMTSDSLINVSDRYIDLEAIKEDIQKTP 144
>gi|119493449|ref|ZP_01624118.1| hypothetical protein L8106_08531 [Lyngbya sp. PCC 8106]
gi|119452693|gb|EAW33872.1| hypothetical protein L8106_08531 [Lyngbya sp. PCC 8106]
Length = 157
Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 88/163 (53%), Gaps = 14/163 (8%)
Query: 17 LYASSKALGFDIDYRKLLKAFR---SRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYN 73
YA K G+ D R++L F+ S I++ A++YT + DP+ Q D L
Sbjct: 2 FYAQQKN-GWFFDPRRVLTYFKHEQSDVILVNAFWYTGL-KDPQDQ----RGFRDALISL 55
Query: 74 GFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAAL 132
G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +V+FSGDG F + L
Sbjct: 56 GYTVRTKILKEYYDDSSGRYSQKANLDIEIVVDMFNTVDQYDRVVLFSGDGDFERAIELL 115
Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
+ K +T+VST M + +LR D ++DL ++++I +
Sbjct: 116 RSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDQIEK 154
>gi|17232331|ref|NP_488879.1| hypothetical protein alr4839 [Nostoc sp. PCC 7120]
gi|17133976|dbj|BAB76538.1| alr4839 [Nostoc sp. PCC 7120]
Length = 157
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 87/163 (53%), Gaps = 14/163 (8%)
Query: 17 LYASSKALGFDIDYRKLLKAFR---SRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYN 73
YA K G+ D R++L+ F+ S +I A++YT + DP+ Q D L
Sbjct: 2 FYAQQKN-GWFFDPRRVLEYFKNEQSETTLINAFWYTGL-KDPQDQ----RGFRDALISL 55
Query: 74 GFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAAL 132
G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +V+FSGDG F + L
Sbjct: 56 GYTVRTKILKEYCDDSSGRYSQKANLDIEIVVDMFNTVDQYDRVVLFSGDGDFERAIELL 115
Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
+ K +T+VST M + +LR D ++DL +++ I +
Sbjct: 116 RSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDRIEK 154
>gi|300866267|ref|ZP_07110978.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
gi|300335738|emb|CBN56138.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
Length = 157
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 87/163 (53%), Gaps = 14/163 (8%)
Query: 17 LYASSKALGFDIDYRKLLKAFRS---RAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYN 73
YA K G+ D R++L+ F++ ++I A++YT + DP+ Q D L
Sbjct: 2 FYAQQKN-GWFFDPRRVLEYFKNAQQNVMLINAFWYTGL-KDPQDQ----RGFRDALISL 55
Query: 74 GFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAAL 132
G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +V+FSGDG F + L
Sbjct: 56 GYTVRTKILKEYYDDASGRYSQKANLDIEIVVDMFNTVDQYDQVVLFSGDGDFERAIELL 115
Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
+ K +T+VST M + +LR D ++DL ++ I +
Sbjct: 116 RSKNTHITVVST----EGMIARELRNATDRYIDLNEIREHIEK 154
>gi|119509873|ref|ZP_01629016.1| hypothetical protein N9414_11729 [Nodularia spumigena CCY9414]
gi|119465482|gb|EAW46376.1| hypothetical protein N9414_11729 [Nodularia spumigena CCY9414]
Length = 236
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 87/180 (48%), Gaps = 14/180 (7%)
Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
+ R ++A+FIDG +L+ ++ LG +IDY KLL + ++RA++YT +
Sbjct: 51 LENRGRVAIFIDGVSLFHTALQLGIEIDYLKLLCHLTGGSRLLRAFFYTAIDTSRPNAAR 110
Query: 62 P-----LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHL 116
P L W+ NG++VV K + K +++VE+AVD + +
Sbjct: 111 PRPNEKQQGFLFWMRRNGYRVVTKEVQ-----LADHTKKHNLNVEIAVDMITLAPYYDTA 165
Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
++ SGD V A+ +V +VS ++ SD L AD F+DL +K I +D
Sbjct: 166 ILVSGDRDLAYAVNAVSATGSRVEVVSL----RALTSDSLIDVADEFIDLDRIKQYIQKD 221
>gi|194333277|ref|YP_002015137.1| hypothetical protein Paes_0433 [Prosthecochloris aestuarii DSM 271]
gi|194311095|gb|ACF45490.1| protein of unknown function DUF88 [Prosthecochloris aestuarii DSM
271]
Length = 294
Score = 70.5 bits (171), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 73/139 (52%), Gaps = 4/139 (2%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
K +FIDGANL+ + + +G+ ID+ +L+ F + A YY G Q+ + +
Sbjct: 8 KAGVFIDGANLFFTQRHMGWQIDFSRLIAFFMQCFDSVEARYYVPESGALSQEQVAFNRM 67
Query: 67 LDWLHYNGFQVVAK-VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
L+ NG+ + +K V K + G +K ++DVEL VDA + + ++ SGD F
Sbjct: 68 LE---ANGYTITSKPVKKIVNKETGEVVMKGNLDVELVVDALTTASRYDSFILVSGDSDF 124
Query: 126 TTLVAALQRKVKKVTIVST 144
L+ AL+ + K + + ST
Sbjct: 125 LPLIRALRSRGKDIQVYST 143
>gi|662866|emb|CAA87004.1| orf1 [Nostoc sp. PCC 7120]
Length = 157
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 82/151 (54%), Gaps = 13/151 (8%)
Query: 29 DYRKLLKAFR---SRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEF 85
D R++L+ F+ S +I A++YT + DP+ Q D L G+ V K+ KE+
Sbjct: 13 DPRRVLEYFKNEQSETTLINAFWYTGL-KDPQDQ----RGFRDALISLGYTVRTKILKEY 67
Query: 86 TENC-GRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVST 144
++ GR K+++D+E+ VD F + + +V+FSGDG F + L+ K +T+VST
Sbjct: 68 CDDSSGRYSQKANLDIEIVVDMFNTVDQYDRVVLFSGDGDFERAIELLRSKNTHITVVST 127
Query: 145 VLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
M + +LR D ++DL +++ I +
Sbjct: 128 ----EGMIARELRNATDRYIDLNDIRDRIEK 154
>gi|220910751|ref|YP_002486061.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7425]
gi|219867523|gb|ACL47860.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7425]
Length = 343
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 85/166 (51%), Gaps = 14/166 (8%)
Query: 9 ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYT-TVVGDPEQQFSPLHPLL 67
A+FID ANL S++ L +DY+K+ + R ++YT GD Q+ L
Sbjct: 171 AIFIDAANLEYSARDLNLQLDYQKIYRFLTKGMKQPRVFFYTGERPGDARQKKQ-----L 225
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTT 127
DWL G+Q+V K K + G + K+++DVELA+D + ++ L V+ SGDG FT
Sbjct: 226 DWLTGIGYQLVTK--KIVRQPGGTE--KANLDVELALDMYRLADTLSRAVLVSGDGDFTQ 281
Query: 128 LVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
+ L K+ I V+S S S L + A+ ++DL EI
Sbjct: 282 ALQLL----KQQGIAVDVISFRSCTSKALIKAANRYIDLEQRTAEI 323
>gi|218295249|ref|ZP_03496085.1| protein of unknown function DUF88 [Thermus aquaticus Y51MC23]
gi|218244452|gb|EED10977.1| protein of unknown function DUF88 [Thermus aquaticus Y51MC23]
Length = 180
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 87/171 (50%), Gaps = 17/171 (9%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
+IALFIDG+ +Y ++K LG+++D+R+++ F + + A+YY + DPE +
Sbjct: 2 RIALFIDGSYMYQAAKRLGWNVDHRRVITQFATPEQLYNAFYYVPIT-DPEDERQ--QRF 58
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126
+D L + G+ V +++ + G R ++ M A D + + V+ SG G
Sbjct: 59 IDALVFMGYTVRSRLVR------GEARFEAMM----ATDLLTTAPRWDRAVVASGSGELA 108
Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
AL+ K+V + L +A +LR QAD F++LA + + R P
Sbjct: 109 HAFQALRAMGKEVHL----LGVHELADLELRNQADRFLNLAEWREVLERTP 155
>gi|291297150|ref|YP_003508548.1| hypothetical protein Mrub_2781 [Meiothermus ruber DSM 1279]
gi|290472109|gb|ADD29528.1| protein of unknown function DUF88 [Meiothermus ruber DSM 1279]
Length = 190
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 86/171 (50%), Gaps = 21/171 (12%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVV--GDPEQQFSPLH 64
K ALFIDG+ +Y ++K LG++ID+RK + F + A+YY V D QQ
Sbjct: 2 KTALFIDGSYMYDAAKRLGWNIDHRKAIGVFSKPEDLYNAFYYAPVTDSNDERQQ----- 56
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
LD L + G+ V ++ E G R ++ + +L V A E V+ SG G
Sbjct: 57 KFLDALVFMGYTVRSR------ETHGDPRFEAMIATDLLVTAPR----WERAVVASGSGD 106
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
++AL+ + K++ ++ P + +LR Q+D ++DL L+ ++ R
Sbjct: 107 LAHTLSALRAQGKEIHLLGV----PELTDLELRNQSDRYLDLRELQAQLER 153
>gi|150378220|ref|YP_001314815.1| hypothetical protein Smed_6284 [Sinorhizobium medicae WSM419]
gi|150032767|gb|ABR64882.1| conserved hypothetical protein [Sinorhizobium medicae WSM419]
Length = 48
Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 33/45 (73%), Positives = 38/45 (84%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIR 45
MFD REKIAL IDGANL+A+SKALGF+ID+ KLL AFR RA + R
Sbjct: 1 MFDQREKIALLIDGANLHAASKALGFEIDFCKLLSAFRRRASLPR 45
>gi|318040287|ref|ZP_07972243.1| hypothetical protein SCB01_01212 [Synechococcus sp. CB0101]
Length = 175
Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 87/171 (50%), Gaps = 10/171 (5%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLK-AFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
++AL +DG +++ + LG+ D R+LL A + + I + ++ T + DP Q P
Sbjct: 2 QLALAVDGHSMFYVQQKLGWFFDPRRLLAYATATPGVEISSAFWYTGLKDPTDQ----RP 57
Query: 66 LLDWLHYNGFQVVAKVAKEFT-ENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
D L GF V K +E E R+ ++++DVE+A+D + + + + SG
Sbjct: 58 FRDALTSLGFTVRTKPLREVGGEADQRQFARANLDVEVAIDLLAVAHRTDEVWLLSGSRD 117
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
LV L+ K KV +VST M +LR AD F+DLA L+ ++ +
Sbjct: 118 LERLVEVLRIKGLKVVLVST----DGMVPRELRNAADRFLDLAELRPQLEK 164
>gi|114764533|ref|ZP_01443758.1| hypothetical protein 1100011001295_R2601_11629 [Pelagibaca
bermudensis HTCC2601]
gi|114543100|gb|EAU46119.1| hypothetical protein R2601_11629 [Roseovarius sp. HTCC2601]
Length = 60
Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 45/59 (76%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + E +
Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFVRRGKMVRAFYYTALLENDEYR 59
>gi|330984094|gb|EGH82197.1| hypothetical protein PLA107_03594 [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 282
Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 86/161 (53%), Gaps = 14/161 (8%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLK-AFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
E++ ++ID AN+ A+ GF++DY L + A R A + Y++ ++ H
Sbjct: 4 ERVGVYIDQANVNANQ---GFEMDYSVLREFALRGGARGVHLNVYSSTNPAKAERDPAWH 60
Query: 65 PLL----DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L + G+ + K AKE+ E R VK++ DV++AVD E + L+ +++ S
Sbjct: 61 SRLKAYQSQIRSMGYHINLKEAKEYGEG-DRLVVKANADVDIAVDVLESASKLDRILLVS 119
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
GDG F++LVAA +R+ +V +++ S+QLR +D
Sbjct: 120 GDGDFSSLVAAARRQGARVEVLAF-----DHCSEQLRGASD 155
>gi|328951205|ref|YP_004368540.1| Domain of unknown function DUF88 [Marinithermus hydrothermalis DSM
14884]
gi|328451529|gb|AEB12430.1| Domain of unknown function DUF88 [Marinithermus hydrothermalis DSM
14884]
Length = 186
Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 85/174 (48%), Gaps = 20/174 (11%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP--EQQFSPL 63
E+I LFIDG+ +Y+++K +G+++D+R++L+ FR + A+YY + DP E+Q
Sbjct: 2 ERIGLFIDGSYIYSAAKRMGWNVDHRRVLEHFRGDRALYNAFYYAPIT-DPNDERQLK-- 58
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
LD L + G+ V + + + N G V L D + E +I SG
Sbjct: 59 --FLDALVFMGYTVRSHEVRGESPNLG---------VYLVTDLLLTAPRWEVALISSGAR 107
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
V A++ K+V + L P + +LR +D F+D+ + + R P
Sbjct: 108 EIAPAVEAVRAMGKEVRL----LGLPELTDLELRSSSDRFIDIREYREVLERQP 157
>gi|254424011|ref|ZP_05037729.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
gi|196191500|gb|EDX86464.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
Length = 157
Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 84/163 (51%), Gaps = 14/163 (8%)
Query: 17 LYASSKALGFDIDYRKLLKAFRSR---AIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYN 73
YA K G+ D +++L+ F ++ A++YT + DP+ Q D L
Sbjct: 2 FYAQQKN-GWFFDPKRVLEYFLKEIEGNVLGNAFWYTGL-KDPQDQ----RAFRDALISL 55
Query: 74 GFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAAL 132
G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +V+FSGDG F + L
Sbjct: 56 GYTVRTKILKEYYDDASGRYSQKANLDIEIVVDMFNTVDQYDRVVLFSGDGDFERAIELL 115
Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
+ K +T+VST M + +LR D ++DL ++ I +
Sbjct: 116 RSKSTHITVVST----EGMIARELRNVTDRYIDLNSIRRRIEK 154
>gi|83646130|ref|YP_434565.1| hypothetical protein HCH_03390 [Hahella chejuensis KCTC 2396]
gi|83634173|gb|ABC30140.1| uncharacterized conserved protein [Hahella chejuensis KCTC 2396]
Length = 303
Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 78/151 (51%), Gaps = 12/151 (7%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA-IVIRAYYYTTVVGDPEQQFSPLH- 64
K +FID NL G +DY ++K +VIRA Y V D EQ+ +
Sbjct: 7 KAGIFIDNDNLIYGQDREG--LDYSAIIKFVEDLGMLVIRANTYMAVDEDREQKDAKYRQ 64
Query: 65 ---PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
+ GF+V K K++ + G K ++D+ELAVDA Q++ L+++++ SG
Sbjct: 65 EQRKHRSDIRNAGFRVFEKPLKKYQQEDGTVYAKGNVDLELAVDALLQTDNLDYVLLGSG 124
Query: 122 DGCFTTLVAALQRKVKKVTI-----VSTVLS 147
DG F+ +V+ALQ K KKV +ST LS
Sbjct: 125 DGDFSRVVSALQHKGKKVEAFAFDNISTELS 155
>gi|254417286|ref|ZP_05031030.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
gi|196175939|gb|EDX70959.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
Length = 110
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 64/103 (62%), Gaps = 8/103 (7%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ + R ++A+FIDG+NL+ ++ LG +IDY KLL + + ++R+++YT V E+Q
Sbjct: 16 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLVRLTAGSRLLRSFFYTGVDRTNEKQ- 74
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELA 103
L W+ NG++V+AK + + G K K+++DVE+A
Sbjct: 75 ---QGFLLWMRRNGYRVIAKDLVQLPD--GSK--KANLDVEIA 110
>gi|320451037|ref|YP_004203133.1| hypothetical protein TSC_c19750 [Thermus scotoductus SA-01]
gi|320151206|gb|ADW22584.1| hypothetical protein TSC_c19750 [Thermus scotoductus SA-01]
Length = 182
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 85/169 (50%), Gaps = 17/169 (10%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
++ALFIDG+ +Y ++K LG+++D+R++L F + + A+YY + DPE +
Sbjct: 2 RVALFIDGSYMYLATKRLGWNVDHRRVLTQFATPEQLYNAFYYVPIT-DPEDERQ--QRF 58
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126
+D L + G+ V +++ + G R ++ M A D + + ++ SG G
Sbjct: 59 IDALVFMGYTVRSRLVR------GEARFEAMM----ATDLLTTAPRWDRAIVASGSGELA 108
Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
+ L+ K++ + L +A +LR QAD F++L + + R
Sbjct: 109 HTFSTLRAMGKEIHL----LGVHELADLELRNQADRFLNLPEWREVLER 153
>gi|126655888|ref|ZP_01727327.1| hypothetical protein CY0110_19792 [Cyanothece sp. CCY0110]
gi|126623367|gb|EAZ94072.1| hypothetical protein CY0110_19792 [Cyanothece sp. CCY0110]
Length = 103
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 59/103 (57%), Gaps = 5/103 (4%)
Query: 74 GFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAAL 132
G+ V K+ KE+ ++ GR K+++D+E+ VD F E + +++FSGDG F + L
Sbjct: 2 GYTVRTKILKEYYDDTSGRYSQKANLDIEIVVDMFNTVEQYDRVILFSGDGDFERAIELL 61
Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
+ K +T+VST M + +LR D ++DL +K+ I +
Sbjct: 62 RSKNTHITVVST----EGMIARELRNATDRYIDLNDIKDSIEK 100
>gi|313127027|ref|YP_004037297.1| hypothetical protein Hbor_22910 [Halogeometricum borinquense DSM
11551]
gi|312293392|gb|ADQ67852.1| uncharacterized conserved protein [Halogeometricum borinquense DSM
11551]
Length = 165
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 83/165 (50%), Gaps = 14/165 (8%)
Query: 4 PREKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
P +++A+ D NLY S+++L +IDY LL+ S + RA Y PE++
Sbjct: 6 PGQRVAILADAQNLYHSAQSLYSRNIDYSSLLEKGVSDRTLTRAIAYVVRADSPEEE--- 62
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
D L GF+ K K F G K+ DV +++DA + ++ +V+ +GD
Sbjct: 63 --SFFDALVEIGFETKIKDIKTF----GDGSKKADWDVGMSLDAVTLANHVDTVVLCTGD 116
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
G F+ L + L+ + +V +++ S +D+L AD F+D++
Sbjct: 117 GDFSRLCSHLRHEGVRVEVIAFKES----TADELIEAADTFLDMS 157
>gi|328952819|ref|YP_004370153.1| Domain of unknown function DUF88 [Desulfobacca acetoxidans DSM
11109]
gi|328453143|gb|AEB08972.1| Domain of unknown function DUF88 [Desulfobacca acetoxidans DSM
11109]
Length = 297
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 83/164 (50%), Gaps = 16/164 (9%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLK-AFRSRAIVIRAYYYTT-----VVGDPEQQF 60
KI +++D N+ + G+ + Y L + A R+ ++R Y V DP +
Sbjct: 30 KIGVYVDSMNIVRNG---GYGMRYEVLRRFATRNGGQIVRLNAYVALDEERVGADP--NY 84
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
+ + L GF+V+ K + FT+ GR K++ D+++A+D QS+ L+ +++ +
Sbjct: 85 NATLNFISTLRDLGFKVIEKPIRWFTDESGRTYGKANADMDMALDIISQSDRLDMVLLLT 144
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
GDG F +V +Q K +V +V+ + S LRR+ D F+
Sbjct: 145 GDGDFCNVVTMVQNKGCRVELVAF-----ANVSSWLRREVDLFV 183
>gi|282895638|ref|ZP_06303763.1| Protein of unknown function DUF88 [Raphidiopsis brookii D9]
gi|281199332|gb|EFA74197.1| Protein of unknown function DUF88 [Raphidiopsis brookii D9]
Length = 156
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 5/88 (5%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
R ++A+FIDG NL+ ++ +G +IDY KLL + ++RA++YT V E+Q
Sbjct: 56 RGRVAIFIDGLNLFHAALQIGIEIDYVKLLCRLTQTSRLLRAFFYTGVDTSKEKQ----Q 111
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRK 92
L W+ NG++VV K TEN G+K
Sbjct: 112 GFLLWMRRNGYRVVTKDIIALTEN-GKK 138
>gi|317050842|ref|YP_004111958.1| hypothetical protein Selin_0654 [Desulfurispirillum indicum S5]
gi|316945926|gb|ADU65402.1| hypothetical protein Selin_0654 [Desulfurispirillum indicum S5]
Length = 290
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 88/163 (53%), Gaps = 13/163 (7%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLK-AFRSRAIVIRAYYYTTVVGDPEQQFSP--- 62
K+ +++D ANL + G+ + Y L + A R A ++R Y + D + +P
Sbjct: 20 KVGVYVDVANLVRNG---GYGMRYEVLREFACRDGAELVRLNAYVSFDVDRASKDAPYKY 76
Query: 63 -LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
+ L G++V+ K K + + G + K++ D+++AVDA QSE L+ +++ +G
Sbjct: 77 KMTNFYAILRDFGYKVIEKPVKWYVDESGNRFGKANADLDMAVDALLQSENLDRVLLVTG 136
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
DG F +V ALQ K +V ++ +++SD L++++D FM
Sbjct: 137 DGDFVQVVRALQNKGCRVETMAF----QNISSD-LKKESDMFM 174
>gi|113474390|ref|YP_720451.1| hypothetical protein Tery_0526 [Trichodesmium erythraeum IMS101]
gi|110165438|gb|ABG49978.1| protein of unknown function DUF88 [Trichodesmium erythraeum IMS101]
Length = 295
Score = 61.2 bits (147), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 81/170 (47%), Gaps = 13/170 (7%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
+ + L ID ANL ++K+L +DY +L + + A Y + +Q
Sbjct: 137 QRRTLLAIDSANLDGAAKSLNMKVDYERLKRYVNVHFGSLEARIYVGKYDNSSRQ----K 192
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
++L NG+ V K + VK+++DV+LA+D E +++V+ SGDG
Sbjct: 193 LWFNYLEKNGYVVKTKPVTVYGNT-----VKANVDVDLALDIREHGVNFKNVVLCSGDGD 247
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
+ LV LQ + I VL+ P + L+RQAD ++ L + EI+
Sbjct: 248 YLPLVEQLQ----GLGIKVIVLASPGHTNHFLQRQADEYISLIDIMGEIS 293
>gi|317970442|ref|ZP_07971832.1| hypothetical protein SCB02_12967 [Synechococcus sp. CB0205]
Length = 168
Score = 60.8 bits (146), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 90/172 (52%), Gaps = 12/172 (6%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLK--AFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
++AL +DG +++ + LG+ D R+LL+ +S + A++YT + +Q+
Sbjct: 2 QLALAVDGHSMFYVQQKLGWFFDPRRLLEYATAQSGVELGSAFWYTGLKDATDQR----- 56
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKR-VKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
P D L GF V K +E + +++ ++++DVE+A+D + ++ + + SG
Sbjct: 57 PFRDALTSLGFTVRTKPLREVGHDSDQRQFARANLDVEIAIDLMAVAHRIDEVWVMSGSR 116
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
L+ L+ + KV ++ST M +LR AD F+DL+ LK ++ +
Sbjct: 117 DLERLLEVLRIRGLKVVLMST----EGMVPRELRNAADRFVDLSSLKPQLEK 164
>gi|219883176|ref|YP_002478338.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7425]
gi|219867301|gb|ACL47639.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7425]
Length = 356
Score = 60.5 bits (145), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 79/160 (49%), Gaps = 14/160 (8%)
Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTV-VGDPEQQFSPLHPL 66
+A+ +D AN+Y LG ++Y +L+ ++ + ++YT + GD QQ
Sbjct: 188 LAILVDAANIYHCGNELGVKVNYDQLIPGLQAGFESSQVWFYTGLKSGDFRQQ-----RF 242
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126
L L G+QVV K + + K+++DVELA++ + +E +++ SGDG
Sbjct: 243 LASLRQQGYQVVTKRVVRHEDG----KEKANLDVELALEMVKLAERYSDILLLSGDGDLA 298
Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
V A ++K +V ++S S S L R AD F DL
Sbjct: 299 CAVRAARQKGARVEVISF----RSRTSQDLIRAADDFRDL 334
>gi|225851407|ref|YP_002731641.1| hypothetical protein PERMA_1879 [Persephonella marina EX-H1]
gi|225645689|gb|ACO03875.1| conserved hypothetical protein [Persephonella marina EX-H1]
Length = 224
Score = 60.5 bits (145), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 81/175 (46%), Gaps = 15/175 (8%)
Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVG-----DPEQ 58
P EK+A+FIDG N++ + + I+Y+KL+ R ++RAY+YT + D +
Sbjct: 19 PNEKVAIFIDGGNMFHACNYMQIKINYKKLIDILRKDRWLLRAYFYTGIPSGDLPRDVRE 78
Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHL 116
Q L+ L G +V K+ E ++ +D+ LA D + +
Sbjct: 79 QLRKQQGFLNELQNLGIKVKTMPLKKTPEGY----IEKGIDILLATDMVSLAFRNAYDTA 134
Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
++ SGD + +V +Q K+V S +S +LR+ D F+ L +K+
Sbjct: 135 ILVSGDSDYVPVVKEIQELGKRVENASF----KRTSSYELRKVCDEFILLDNIKH 185
>gi|320160886|ref|YP_004174110.1| hypothetical protein ANT_14820 [Anaerolinea thermophila UNI-1]
gi|319994739|dbj|BAJ63510.1| hypothetical protein ANT_14820 [Anaerolinea thermophila UNI-1]
Length = 302
Score = 60.5 bits (145), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 83/159 (52%), Gaps = 9/159 (5%)
Query: 9 ALFIDGANLYASS-KALGFDIDYRKLLKAFRSRAIVIRAY--YYTTVVGDPEQQFSPLHP 65
+F+D AN+Y + + + +D+ R+ + AI + AY Y D E+
Sbjct: 34 GVFVDVANIYLNGGQRMQYDV-LREFACRDHAEAIRLNAYVTYDVERAEDDEEYRKGAQN 92
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
L G++V+ K +T+ G + K++ D+++AVDA QS+ L+ ++I SGDG F
Sbjct: 93 FHGALRDLGYKVIVKDIHWYTDVNGIRVAKANADLDMAVDALTQSDYLDRVLIASGDGDF 152
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
+V ALQ K +V +V S++L+ +AD+F+
Sbjct: 153 VQVVRALQNKGCRVEVVGL-----DNVSNRLKAEADFFI 186
>gi|289582398|ref|YP_003480864.1| hypothetical protein Nmag_2746 [Natrialba magadii ATCC 43099]
gi|289531951|gb|ADD06302.1| protein of unknown function DUF88 [Natrialba magadii ATCC 43099]
Length = 165
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 87/165 (52%), Gaps = 16/165 (9%)
Query: 4 PREKIALFIDGANLYASSKAL-GFDIDYRKLL-KAFRSRAIVIRAYYYTTVVGDPEQQFS 61
P +++A+ +D NLY S+++L +IDY LL KA + R + RA Y PE++
Sbjct: 6 PGQRVAVLVDAQNLYHSAQSLHSRNIDYSALLSKAVQDRQLT-RAIAYVIRADAPEEE-- 62
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
D L GF+ K K F++ G K K+ DV +++DA + ++ +V+ +G
Sbjct: 63 ---SFFDALVDIGFETKIKDIKTFSD--GTK--KADWDVGMSLDAVTLANHVDTVVLCTG 115
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
DG F+ L + L+ + +V V++ S +D+L D F+DL
Sbjct: 116 DGDFSRLCSHLRHEGVRV----EVMAFESSTADELIDATDTFLDL 156
>gi|297567250|ref|YP_003686222.1| hypothetical protein Mesil_2873 [Meiothermus silvanus DSM 9946]
gi|296851699|gb|ADH64714.1| protein of unknown function DUF88 [Meiothermus silvanus DSM 9946]
Length = 213
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 82/169 (48%), Gaps = 17/169 (10%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
+IALFIDG+ +Y ++K LG+++D+R+++ F + + A+YY + D E +
Sbjct: 6 RIALFIDGSYMYNAAKRLGWNVDHRRVIGQFATPEELYNAFYYAPIT-DSEDERQ--QKF 62
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126
LD L + G+ V ++ R + + +A D + + V+ SG G
Sbjct: 63 LDALVFMGYTVRSREV----------RGEPRFEALIATDMLITAPRWDRAVVASGAGELA 112
Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
+ AL+ + K++ +V + LR QAD F+DL ++ + R
Sbjct: 113 HALGALRAQGKELYLVGVA----ELTDLWLRNQADRFLDLRDMREGLER 157
>gi|5441510|emb|CAB46751.1| hypothetical protein [Synechococcus elongatus]
Length = 142
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 73/135 (54%), Gaps = 14/135 (10%)
Query: 40 RAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEF-TENCGRKRVKSSM 98
+ +++ A++YT + D + Q S L++ G+ V K+ KE+ E+ G+ K+++
Sbjct: 8 KIVLVNAFWYTGL-KDMQDQRSFRDALINL----GYTVRTKLLKEYYDESLGKYYQKANL 62
Query: 99 DVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRR 158
D+E+ +D F + +V+FSGDG F + L+ K +T+VST M + +LR
Sbjct: 63 DIEIVIDMFNTVGQYDRVVLFSGDGDFERAIELLRSKNTHITVVST----EGMIARELRN 118
Query: 159 QADYFMDLAYLKNEI 173
D ++DL NEI
Sbjct: 119 ATDRYIDL----NEI 129
>gi|300712124|ref|YP_003737938.1| hypothetical protein HacjB3_13825 [Halalkalicoccus jeotgali B3]
gi|299125807|gb|ADJ16146.1| hypothetical protein HacjB3_13825 [Halalkalicoccus jeotgali B3]
Length = 165
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 84/164 (51%), Gaps = 14/164 (8%)
Query: 4 PREKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
P +++A+ +D NLY S+ +L +IDY LL+ ++RA Y PE++ S
Sbjct: 6 PNQRVAVLVDSQNLYHSAHSLYSRNIDYSALLEEAVGGRELVRAIAYVIRADSPEEE-SF 64
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
L+D GF+ K K F G K+ DV +++DA + ++ +V+ +GD
Sbjct: 65 FEALIDI----GFETKIKDIKTF----GDGSKKADWDVGMSLDAVTLASHVDTVVLCTGD 116
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
G F+ L + L+ + +V +++ PS A ++L D F+DL
Sbjct: 117 GDFSRLCSHLRHQGVRVEVMAL---GPSTA-EELIEATDSFVDL 156
>gi|51244756|ref|YP_064640.1| hypothetical protein DP0904 [Desulfotalea psychrophila LSv54]
gi|50875793|emb|CAG35633.1| hypothetical protein DP0904 [Desulfotalea psychrophila LSv54]
Length = 258
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 13/169 (7%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLK-AFRSRAIVIRAYYYTTV----VGD 55
M++ K +++D N+ G+ + Y L++ A A ++RA Y D
Sbjct: 1 MYNDMLKTGIYVDAENIRMCG---GYGMRYDVLVELAGSGNAALLRANSYVAEDRERTKD 57
Query: 56 PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEH 115
+ L+ D L GF+V+ K K F ++ G K++ D++LA+DA Q+ L+
Sbjct: 58 DAEYRHKLYRYHDVLRQCGFKVIKKFVKHFVDDEGILTTKANADMDLAIDALLQARNLDR 117
Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
+++ +GD F L+ ALQ +V +++ S +L+ AD F+
Sbjct: 118 IILLTGDSDFIRLILALQNMGCRVEVIAF-----KHVSQELKECADNFL 161
>gi|195953568|ref|YP_002121858.1| protein of unknown function DUF88 [Hydrogenobaculum sp. Y04AAS1]
gi|195933180|gb|ACG57880.1| protein of unknown function DUF88 [Hydrogenobaculum sp. Y04AAS1]
Length = 176
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 13/165 (7%)
Query: 3 DPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
+ R+ +FIDG NLY K L F +D KL++ F + + ++Y + E+Q
Sbjct: 6 NSRKIAGIFIDGTNLYFVQKQFLDFKVDILKLVRYFANYFAIYNTFFYLAYKEEEEKQ-- 63
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
+ L + G V+ K K+ + +K ++DV+LA+D + + ++ +G
Sbjct: 64 --NKFYRMLTFGGVTVIKKAVKQLKDGS----MKGNLDVDLAMDCLLTKDNYDVAILVTG 117
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
D F L+ L+ K++ +VST D S S +L D F++L
Sbjct: 118 DSDFEKLINILRTFGKQIIVVST--KDSS--SIELVNICDLFVEL 158
>gi|87302148|ref|ZP_01084973.1| hypothetical protein WH5701_08104 [Synechococcus sp. WH 5701]
gi|87283073|gb|EAQ75029.1| hypothetical protein WH5701_08104 [Synechococcus sp. WH 5701]
Length = 260
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 82/166 (49%), Gaps = 10/166 (6%)
Query: 10 LFIDGANLYASSKALGFDIDYRKLLK-AFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68
+ +DG ++ + + LG+ D R+LL+ A + + Y+ T + DP Q P D
Sbjct: 54 VIVDGHGMFYAQQKLGWFFDPRRLLELATADPGVELDGAYWYTGLKDPADQ----RPFRD 109
Query: 69 WLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTT 127
L G+ V +K +EF + R+ ++++DVE+ +D + L+ + + SG
Sbjct: 110 ALTSLGYTVRSKPLREFGADPEHRQFARANLDVEICLDLMMVAHRLDEVWLLSGSRDLER 169
Query: 128 LVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
LV L+ K ++T+ L+ M +LR D F+DLA + ++
Sbjct: 170 LVETLRAKGIRITL----LNADGMVPRELRNAVDVFLDLAGRRKQL 211
>gi|284164086|ref|YP_003402365.1| hypothetical protein Htur_0796 [Haloterrigena turkmenica DSM 5511]
gi|284013741|gb|ADB59692.1| protein of unknown function DUF88 [Haloterrigena turkmenica DSM
5511]
Length = 165
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 90/166 (54%), Gaps = 16/166 (9%)
Query: 4 PREKIALFIDGANLYASSKAL-GFDIDYRKLL-KAFRSRAIVIRAYYYTTVVGDPEQQFS 61
P +++A+ +D NLY ++++L +IDY LL KA + R + RA Y PE++ S
Sbjct: 6 PGQRVAVLVDAQNLYHTAQSLHSRNIDYSALLDKAVQDRQLT-RAIAYVIRADSPEEE-S 63
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
L+D GF+ K K F++ G K K+ DV +++DA + ++ +V+ +G
Sbjct: 64 FFEALIDI----GFEPKIKDIKTFSD--GTK--KADWDVGMSLDAVTLANHVDTVVLCTG 115
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
DG F+ L + L+ + +V V++ S +++L AD F+DL
Sbjct: 116 DGDFSRLCSHLRHEGVRV----EVMAFESSTAEELIAAADSFVDLG 157
>gi|320352193|ref|YP_004193532.1| hypothetical protein Despr_0047 [Desulfobulbus propionicus DSM
2032]
gi|320120695|gb|ADW16241.1| hypothetical protein Despr_0047 [Desulfobulbus propionicus DSM
2032]
Length = 258
Score = 57.4 bits (137), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 73/145 (50%), Gaps = 14/145 (9%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLK-AFRSRAIVIRAYYY-------TTVVGDPEQ 58
K A+++D N+ S G+ + Y L+ A + ++++RA Y T + Q
Sbjct: 3 KTAIYVDAENIKMSG---GYGMRYDVLVDLANNTNSVMLRANCYLAEDHERTQRDAEYRQ 59
Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVI 118
+ H +L GF+++ K + F + G K++ D++LA+DA Q+ L+ +++
Sbjct: 60 KVYSYHNILRQC---GFKIIKKYVRRFKDEDGNITTKANADMDLAIDALLQARNLDRIIL 116
Query: 119 FSGDGCFTTLVAALQRKVKKVTIVS 143
+GDG F L+ ALQ +V ++
Sbjct: 117 LTGDGDFLRLIIALQNMGCRVEVIG 141
>gi|222479108|ref|YP_002565345.1| protein of unknown function DUF88 [Halorubrum lacusprofundi ATCC
49239]
gi|222452010|gb|ACM56275.1| protein of unknown function DUF88 [Halorubrum lacusprofundi ATCC
49239]
Length = 165
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 14/165 (8%)
Query: 4 PREKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
P +++A+ D NLY S++++ +IDY LL+ + ++RA Y PE++
Sbjct: 6 PDQRVAVLADSQNLYHSAQSVYSRNIDYSGLLEEAVNDRSLVRAIAYVIRADSPEEE--- 62
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
+ L GF+ K K F + G K K+ D+ +++DA + ++ +VI +GD
Sbjct: 63 --SFFEALRDIGFETKIKEIKTFAD--GSK--KADWDLGMSLDAVSLASHVDTVVICTGD 116
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
G F L + L+ + +V + + A+D+L AD F+DLA
Sbjct: 117 GDFARLCSHLRHEGVRV----EAMGFGNSAADELIDAADDFVDLA 157
>gi|288818569|ref|YP_003432917.1| hypothetical protein HTH_1263 [Hydrogenobacter thermophilus TK-6]
gi|288787969|dbj|BAI69716.1| hypothetical protein HTH_1263 [Hydrogenobacter thermophilus TK-6]
gi|308752160|gb|ADO45643.1| protein of unknown function DUF88 [Hydrogenobacter thermophilus
TK-6]
Length = 165
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 13/164 (7%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+++ +FIDGAN Y K L ID KL++ F+ + ++Y E+Q
Sbjct: 2 KKRAGIFIDGANFYFIQKHILHQKIDLIKLVEYFKRDYTIYNTFFYLAYREGDEKQ---- 57
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
+ L ++G VV K K+ + K S+DV++A+D + + V+ SGD
Sbjct: 58 ENFIKLLAFSGITVVKKPIKQLKDGT----YKGSLDVDMALDVLLTKDNYDVAVLCSGDS 113
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
F LV L+ K+V VST +S +L D ++DLA
Sbjct: 114 DFERLVWVLRDFSKEVICVST----KESSSVELVNACDRYIDLA 153
>gi|195953366|ref|YP_002121656.1| protein of unknown function DUF88 [Hydrogenobaculum sp. Y04AAS1]
gi|195932978|gb|ACG57678.1| protein of unknown function DUF88 [Hydrogenobaculum sp. Y04AAS1]
Length = 195
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 84/174 (48%), Gaps = 23/174 (13%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE------Q 58
+EK+ +FIDG+N++ K F +DY KL++ ++RAY+Y+ + D + +
Sbjct: 3 KEKLVIFIDGSNVFHGLKNETFRLDYLKLIEFLTGDRYLVRAYFYSALPSDKDVDKQSKE 62
Query: 59 QFSPLHPLLDWLHYNGFQV-VAKVAKEFTENCGRKRVKSSMDVELAVD--AFEQSEGLEH 115
F+ L+ L + G +V +AK+ K N K V D+ LA D + +
Sbjct: 63 GFNKQKKFLEDLAFMGIKVKLAKLRKLPDGNFLEKEV----DIMLATDMLSLAYKNAYDS 118
Query: 116 LVIFSGDGCFTTLVAALQ---RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
V+ SGD F+ V A+Q ++V+ T T +S LRR D F+ L
Sbjct: 119 CVLVSGDSDFSYTVEAVQFLGKRVENATFKKT-------SSYSLRRLCDKFIYL 165
>gi|254481697|ref|ZP_05094940.1| conserved hypothetical protein [marine gamma proteobacterium
HTCC2148]
gi|214037826|gb|EEB78490.1| conserved hypothetical protein [marine gamma proteobacterium
HTCC2148]
Length = 200
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 15/161 (9%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ-QFSPL 63
EKI +F+D N+Y + + G + DY K ++ AY Y T GD +Q QF +
Sbjct: 44 EKITIFVDVQNIYYTCRQTYGRNFDYNKFWAEVTQNRELVGAYAYATDRGDAKQMQFQSI 103
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
LH GF V K + + K+ D+ +A+D +E ++ + +V+ +GDG
Sbjct: 104 ------LHAIGFTVKLKPVLKRRDG----STKADWDIGIALDVYEAAQQCDTVVLLTGDG 153
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F L+ ++R+ V V P++ SD L A F+
Sbjct: 154 DFGLLLDRIKRRFDTNCEVYGV---PALTSDILISAASRFV 191
>gi|260901483|ref|ZP_05909878.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ4037]
gi|308107667|gb|EFO45207.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ4037]
Length = 162
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 77/163 (47%), Gaps = 13/163 (7%)
Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
D +EKIA+ +D N+Y + + A + DY + V+ A Y DP+Q+
Sbjct: 4 DHKEKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATQEKEVVSAKAYAIASNDPKQR-- 61
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
H +L + GF+V+ K + + K DV + +DA E + ++ +++ SG
Sbjct: 62 QFHHILRGV---GFEVMLKPYIQRRDGSA----KGDWDVGITLDAIEIAPDVDRVILVSG 114
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
DG F+ LV +Q++ K TV P + S L AD F+
Sbjct: 115 DGDFSLLVERIQQRYNKKV---TVYGAPRLTSQTLIDCADNFV 154
>gi|153836889|ref|ZP_01989556.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810]
gi|149749847|gb|EDM60592.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810]
Length = 162
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 79/164 (48%), Gaps = 15/164 (9%)
Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
D +EKIA+ +D N+Y + + A + DY + V+ A Y DP+Q+
Sbjct: 4 DHKEKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATQEKEVVSAKAYAIASNDPKQR-- 61
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
H +L + GF+V+ K + + K DV + +DA E + ++ +++ SG
Sbjct: 62 QFHHILRGV---GFEVMLKPYIQRRDGSA----KGDWDVGITLDAIEITPDVDRVILVSG 114
Query: 122 DGCFTTLVAALQRKV-KKVTIVSTVLSDPSMASDQLRRQADYFM 164
DG F+ LV +Q++ KKVT+ P + S L AD F+
Sbjct: 115 DGDFSLLVERIQQRYNKKVTVYGV----PRLTSQTLIDCADNFV 154
>gi|114319473|ref|YP_741156.1| hypothetical protein Mlg_0311 [Alkalilimnicola ehrlichii MLHE-1]
gi|114225867|gb|ABI55666.1| protein of unknown function DUF88 [Alkalilimnicola ehrlichii
MLHE-1]
Length = 274
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 83/162 (51%), Gaps = 13/162 (8%)
Query: 8 IALFIDGANLYASSKALGFDIDYRKLLK-AFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
+ +++D AN+ + GF + Y L + A R+ A IR Y T ++ H
Sbjct: 8 VGIYVDAANIQMNG---GFGMQYDVLREFACRTGAEPIRLNAYVTYDEQRAERDRGYHQR 64
Query: 67 LDWLHYN----GFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
++ + G++V+ K + + + G K++ D+++AVDA QS+ L +++ +GD
Sbjct: 65 VNNFFQSIREFGYKVIIKKYRWYRDEEGNAYAKANADLDMAVDALLQSQSLTRVMMVTGD 124
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
G F +V ALQ + +V +++ S +LRR+AD F+
Sbjct: 125 GDFVQVVRALQNQGCRVELLAF-----DNISSELRREADVFV 161
>gi|237755695|ref|ZP_04584304.1| RtsE [Sulfurihydrogenibium yellowstonense SS-5]
gi|237692145|gb|EEP61144.1| RtsE [Sulfurihydrogenibium yellowstonense SS-5]
Length = 174
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 83/173 (47%), Gaps = 14/173 (8%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
+++A+F+D NLY S++ +++ +L I++RA+ Y + +Q+
Sbjct: 9 QRVAIFVDIQNLYYSARDTFNRKVNFESILYKTLGDRILVRAFAYIVKLQGVDQK----- 63
Query: 65 PLLDWLHYNGFQVVAKVAKEFT----ENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
++ L + G+QV K K F E +K+ D+ +A+DA SE ++ ++ +
Sbjct: 64 GFINTLKHIGYQVREKEPKIFKRLDEEGNLWTTIKADWDMGIAIDAIALSEKIDVAILTT 123
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
GDG F LV LQ K KV I + + +L AD F+DL +I
Sbjct: 124 GDGDFKDLVKYLQTKGVKVEIAAF----KQTTAKELIEVADEFIDLTTFGEDI 172
>gi|110667467|ref|YP_657278.1| hypothetical protein HQ1506A [Haloquadratum walsbyi DSM 16790]
gi|109625214|emb|CAJ51634.1| conserved hypothetical protein [Haloquadratum walsbyi DSM 16790]
Length = 165
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 14/165 (8%)
Query: 4 PREKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
P +++A+ D NLY ++++L IDY LLK S + RA Y PE++ +
Sbjct: 6 PGQRVAVLADAQNLYHTAQSLYSQKIDYGSLLKKGVSGRELTRAIAYVIQADAPEEE-TF 64
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
L+D GF+ K K F G K+ DV +++DA + ++ +V+ +GD
Sbjct: 65 FEALVDI----GFEPKIKQIKTF----GDGTKKADWDVGMSLDAVTLANHVDTVVLCTGD 116
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
G F+ L + L+ + +V ++S S +D+L AD F+DL+
Sbjct: 117 GDFSRLCSHLRHEGVRVEVMSFRES----TADELVDAADTFIDLS 157
>gi|28900837|ref|NP_800492.1| hypothetical protein VPA0982 [Vibrio parahaemolyticus RIMD 2210633]
gi|260362550|ref|ZP_05775470.1| conserved hypothetical protein [Vibrio parahaemolyticus K5030]
gi|260879204|ref|ZP_05891559.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034]
gi|260896739|ref|ZP_05905235.1| conserved hypothetical protein [Vibrio parahaemolyticus Peru-466]
gi|13506637|gb|AAK08637.1| hypothetical protein [Vibrio parahaemolyticus]
gi|28809283|dbj|BAC62325.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
2210633]
gi|308087322|gb|EFO37017.1| conserved hypothetical protein [Vibrio parahaemolyticus Peru-466]
gi|308094054|gb|EFO43749.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034]
gi|308115257|gb|EFO52797.1| conserved hypothetical protein [Vibrio parahaemolyticus K5030]
gi|328470741|gb|EGF41652.1| hypothetical protein VP10329_08072 [Vibrio parahaemolyticus 10329]
Length = 162
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 79/164 (48%), Gaps = 15/164 (9%)
Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
D +EKIA+ +D N+Y + + A + DY + V+ A Y DP+Q+
Sbjct: 4 DHKEKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATQEKEVVSAKAYAIASNDPKQR-- 61
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
H +L + GF+V+ K + + K DV + +DA E + ++ +++ SG
Sbjct: 62 QFHHILRGV---GFEVMLKPYIQRRDGSA----KGDWDVGITLDAIEIAPDVDRVILVSG 114
Query: 122 DGCFTTLVAALQRKV-KKVTIVSTVLSDPSMASDQLRRQADYFM 164
DG F+ LV +Q++ KKVT+ P + S L AD F+
Sbjct: 115 DGDFSLLVERIQQRYNKKVTVYGV----PRLTSQTLIDCADNFV 154
>gi|149190237|ref|ZP_01868512.1| hypothetical protein VSAK1_15107 [Vibrio shilonii AK1]
gi|148835984|gb|EDL52946.1| hypothetical protein VSAK1_15107 [Vibrio shilonii AK1]
Length = 174
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 82/164 (50%), Gaps = 17/164 (10%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRS--RAIVIRAYYYTTVVGDPEQQFSP 62
E IA+F+D N+Y +++ A G DY L R + RAY ++ DP+Q+
Sbjct: 17 ESIAIFVDVQNVYYTTRQAFGRRFDYNALWAKLSQSYRIDIARAYAISST--DPKQR--Q 72
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
H +L + +N Q+ K F + K DV LA+D +E + ++ +V+ SGD
Sbjct: 73 FHHILRGIGFN-VQL-----KPFIQRLD-GSAKGDWDVGLALDVYETANSVDRIVLISGD 125
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
G F LV +Q++ V+ V S+ ++ L + AD ++++
Sbjct: 126 GDFQVLVERIQQRFNTKVTVAGV---RSLTANNLIQAADDYIEI 166
>gi|327482342|gb|AEA85652.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166]
Length = 158
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 16/163 (9%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPL 63
+KIALF D NLY + + A G DY L R ++ AY Y GDP +QQF +
Sbjct: 2 KKIALFADVQNLYYTVRQAHGCHFDYSALWADVSRRGSIVEAYAYAIERGDPRQQQFQQI 61
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF V K + ++ K DV + +D + + ++ +V+ SGDG
Sbjct: 62 ------LRKLGFTVKLKPYIQRSDGS----AKGDWDVGITIDVLDAAARVDEVVLASGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
F L+ +V+ + +T P + + L R A ++ +
Sbjct: 112 DFDLLL----ERVRAAGVEATAYGVPGLTAQSLIRAATRYVPI 150
>gi|163782630|ref|ZP_02177627.1| hypothetical protein HG1285_17140 [Hydrogenivirga sp. 128-5-R1-1]
gi|159882203|gb|EDP75710.1| hypothetical protein HG1285_17140 [Hydrogenivirga sp. 128-5-R1-1]
Length = 198
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 83/178 (46%), Gaps = 31/178 (17%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTV-------VGDPE- 57
E++ +FIDG+NL+ + L IDY +L+ R ++RAY+YT V G PE
Sbjct: 4 ERLMIFIDGSNLFHGIRYLNIKIDYGRLVDFLRESRRLVRAYFYTAVPQDRDVKKGTPEW 63
Query: 58 QQFSPLHPLLDWLHYNGFQV-VAKVAK----EFTENCGRKRVKSSMDVELAVD----AFE 108
+ LD L +G +V +AK+ K EF E +D+ LA D AF+
Sbjct: 64 ESLIRQKRFLDELALSGIKVKLAKLRKLPSGEFIE--------KEVDIMLATDMLSLAFQ 115
Query: 109 QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
+ + V+ SGD F V +QR K+V + +S LR+ D F+ L
Sbjct: 116 NA--YDTAVLVSGDSDFIYTVEEIQRIGKRVENATF----KKTSSYNLRKTCDRFVLL 167
>gi|149911940|ref|ZP_01900538.1| hypothetical protein PE36_11027 [Moritella sp. PE36]
gi|149804987|gb|EDM65016.1| hypothetical protein PE36_11027 [Moritella sp. PE36]
Length = 157
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 78/159 (49%), Gaps = 13/159 (8%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
+KIA+F+D N+Y +++ G +YRKL + + V+ AY Y GD +Q+
Sbjct: 2 QKIAVFVDVQNIYYTTRQTYGRQFNYRKLWQHLLLQGDVVTAYAYAIDKGDDQQR----- 56
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
D L + GF V K + ++ K DV + +D + +E ++ +V+ SGDG
Sbjct: 57 KFQDALKHIGFDVKLKPFIQRSDGSA----KGDWDVGITIDVLQVAESVDTVVLLSGDGD 112
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163
F L+ ++ + + + + V P++ ++ L A F
Sbjct: 113 FAILLDTIKARHQ---VRAEVYGVPALTANALINSATVF 148
>gi|157835942|pdb|2QIP|A Chain A, Crystal Structure Of A Protein Of Unknown Function Vpa0982
From Vibrio Parahaemolyticus Rimd 2210633
Length = 165
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 15/164 (9%)
Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
D +EKIA+ +D N+Y + + A + DY + V+ A Y DP+Q+
Sbjct: 7 DHKEKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATQEKEVVSAKAYAIASNDPKQR-- 64
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
H +L + GF+V K + + K DV + +DA E + ++ +++ SG
Sbjct: 65 QFHHILRGV---GFEVXLKPYIQRRDGSA----KGDWDVGITLDAIEIAPDVDRVILVSG 117
Query: 122 DGCFTTLVAALQRKV-KKVTIVSTVLSDPSMASDQLRRQADYFM 164
DG F+ LV +Q++ KKVT+ P + S L AD F+
Sbjct: 118 DGDFSLLVERIQQRYNKKVTVYGV----PRLTSQTLIDCADNFV 157
>gi|325283309|ref|YP_004255850.1| hypothetical protein Deipr_1081 [Deinococcus proteolyticus MRP]
gi|324315118|gb|ADY26233.1| Domain of unknown function DUF88 [Deinococcus proteolyticus MRP]
Length = 186
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 70/142 (49%), Gaps = 6/142 (4%)
Query: 4 PREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
P+ ++ +FID NLY S++ L +++ LL A ++ A YT + S
Sbjct: 6 PKPRVGIFIDTQNLYHSARDLLERTVNFETLLHAGADGRELVHAIAYTV----ERENEST 61
Query: 63 LHPLLDWLHYNGFQVV-AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
P + L G++V + FT + GR + + D+ + D + L+ +V+ SG
Sbjct: 62 ARPFIYKLSTLGYKVRRMNLTLHFTSDSGRPIYEGNWDMGMVADMVRLMDHLDIVVLGSG 121
Query: 122 DGCFTTLVAALQRKVKKVTIVS 143
DG FT +V LQ + K+V +++
Sbjct: 122 DGDFTDIVEVLQERGKRVEVLA 143
>gi|49081554|gb|AAT50177.1| PA3951 [synthetic construct]
Length = 168
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 76/163 (46%), Gaps = 15/163 (9%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPL 63
+KIA+F D NLY + + A G ++Y L ++ AY Y GDP +QQF +
Sbjct: 10 KKIAVFADVQNLYYTVRQAYGCHLNYAALWADIARGGSIVEAYAYAIDRGDPRQQQFQQI 69
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF V K + + K DV + +D + + ++ +V+ SGDG
Sbjct: 70 ------LRNLGFTVKLKPYIQRADGS----AKGDWDVGITIDVLDAAPRVDEVVLLSGDG 119
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
F L L++ ++ +V+T P + ++ L R A ++ +
Sbjct: 120 DFDLL---LEKVIRAHGVVATAYGVPGLTANALIRAASRYVPI 159
>gi|15599146|ref|NP_252640.1| hypothetical protein PA3951 [Pseudomonas aeruginosa PAO1]
gi|107103468|ref|ZP_01367386.1| hypothetical protein PaerPA_01004538 [Pseudomonas aeruginosa PACS2]
gi|116051991|ref|YP_789166.1| hypothetical protein PA14_12750 [Pseudomonas aeruginosa UCBPP-PA14]
gi|218889766|ref|YP_002438630.1| hypothetical protein PLES_10241 [Pseudomonas aeruginosa LESB58]
gi|254242637|ref|ZP_04935959.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|296387523|ref|ZP_06876998.1| hypothetical protein PaerPAb_05192 [Pseudomonas aeruginosa PAb1]
gi|313109387|ref|ZP_07795349.1| hypothetical protein PA39016_001770011 [Pseudomonas aeruginosa
39016]
gi|9950139|gb|AAG07338.1|AE004813_5 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
gi|115587212|gb|ABJ13227.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|126196015|gb|EAZ60078.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|218769989|emb|CAW25751.1| conserved hypothetical protein [Pseudomonas aeruginosa LESB58]
gi|310881851|gb|EFQ40445.1| hypothetical protein PA39016_001770011 [Pseudomonas aeruginosa
39016]
Length = 167
Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 76/163 (46%), Gaps = 15/163 (9%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPL 63
+KIA+F D NLY + + A G ++Y L ++ AY Y GDP +QQF +
Sbjct: 10 KKIAVFADVQNLYYTVRQAYGCHLNYAALWADIARGGSIVEAYAYAIDRGDPRQQQFQQI 69
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF V K + + K DV + +D + + ++ +V+ SGDG
Sbjct: 70 ------LRNLGFTVKLKPYIQRADGS----AKGDWDVGITIDVLDAAPRVDEVVLLSGDG 119
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
F L L++ ++ +V+T P + ++ L R A ++ +
Sbjct: 120 DFDLL---LEKVIRAHGVVATAYGVPGLTANALIRAASRYVPI 159
>gi|120598045|ref|YP_962619.1| hypothetical protein Sputw3181_1222 [Shewanella sp. W3-18-1]
gi|120558138|gb|ABM24065.1| protein of unknown function DUF88 [Shewanella sp. W3-18-1]
Length = 157
Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 13/159 (8%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
+KIALF+D N+Y + + A G +YRKL + ++ A Y GD Q
Sbjct: 2 KKIALFVDVQNIYYTCREAYGRQFNYRKLWQHLGYEGDIVLAVAYAIHKGDDGQL----- 56
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
D L + GF+V K + ++ K DV + +D E + ++ +++ SGDG
Sbjct: 57 KFQDALKHIGFEVKLKPFIQRSDGS----AKGDWDVGITIDIMEAASEVDTVILLSGDGD 112
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163
F L LQ+ +K + + V P++ + LR A F
Sbjct: 113 FDLL---LQKIYQKYGVETQVYGVPTLTAKSLRDAASQF 148
>gi|15605762|ref|NP_213139.1| hypothetical protein aq_200 [Aquifex aeolicus VF5]
gi|2982933|gb|AAC06550.1| hypothetical protein aq_200 [Aquifex aeolicus VF5]
Length = 208
Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 23/174 (13%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTV-------VGDPE- 57
E++ +FIDG+NL+ + L +DY KL++ R ++RAY+YT V G PE
Sbjct: 3 ERLMIFIDGSNLFHGIRYLNIKVDYSKLVEFLREGRYLVRAYFYTAVPQEKDIKKGTPEW 62
Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEH 115
LD L + G +V ++ + ++ +D+ LA D + +
Sbjct: 63 DSLQRQKRFLDELSFMGIKVKTAHLRKLPSG---EYLEKEVDIMLATDMLSLAYRNAYDT 119
Query: 116 LVIFSGDGCFTTLVAALQ---RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
V+ SGD F V A+Q ++V+ T T +S LR+ D F+ L
Sbjct: 120 AVLVSGDSDFIHTVEAVQSLGKRVENATFKKT-------SSYNLRKVCDRFILL 166
>gi|269967719|ref|ZP_06181767.1| hypothetical protein VMC_31970 [Vibrio alginolyticus 40B]
gi|269827625|gb|EEZ81911.1| hypothetical protein VMC_31970 [Vibrio alginolyticus 40B]
Length = 162
Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 13/163 (7%)
Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
+ ++KIA+ +D N+Y + + A + DY + V+ A Y DP+Q+
Sbjct: 4 ESKQKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATQGKEVVSARAYAIASNDPKQR-- 61
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
H +L + GF+V+ K + + K DV + +DA E + +E +++ SG
Sbjct: 62 QFHHILRGV---GFEVMLKPYIQRRDGSS----KGDWDVGITLDAIEIAPEVEEVILVSG 114
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
DG F+ LV +Q++ K TV P + S L AD F+
Sbjct: 115 DGDFSLLVERIQQRFNKTV---TVYGVPKLTSQTLIDCADNFV 154
>gi|225848799|ref|YP_002728963.1| RtsE [Sulfurihydrogenibium azorense Az-Fu1]
gi|225644319|gb|ACN99369.1| RtsE [Sulfurihydrogenibium azorense Az-Fu1]
Length = 174
Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 82/166 (49%), Gaps = 14/166 (8%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
+++A+F+D NLY S++ +++ +L+ I++RA+ Y + +Q+
Sbjct: 9 QRVAVFVDIQNLYYSARDTFNRKVNFESILQKTVGDRILVRAFAYIVKLHGVDQK----- 63
Query: 65 PLLDWLHYNGFQVVAKVAKEFT----ENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
++ L + G+QV K K F E +K+ D+ +A+DA ++ ++ V+ +
Sbjct: 64 GFINTLKHIGYQVREKEPKIFKRLDEEGNLWTTIKADWDMGIAIDAISLADKIDVAVLTT 123
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
GDG F LV LQ K KV I + + +L AD F+DL
Sbjct: 124 GDGDFKDLVKYLQTKGVKVEIAAF----KQTTAKELIEAADEFIDL 165
>gi|262395374|ref|YP_003287227.1| hypothetical protein VEA_000074 [Vibrio sp. Ex25]
gi|262338968|gb|ACY52762.1| hypothetical protein VEA_000074 [Vibrio sp. Ex25]
Length = 162
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
++KIA+ +D N+Y + + A + DY + V+ A Y DP+Q+
Sbjct: 6 KQKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATQGKEVVSARAYAIASNDPKQR--QF 63
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
H +L + GF+V+ K + + K DV + +DA E + +E +++ SGDG
Sbjct: 64 HHILRGV---GFEVMLKPYIQRRDGSS----KGDWDVGITLDAIEIAPEVEEVILVSGDG 116
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F+ LV +Q++ K TV P + S L AD F+
Sbjct: 117 DFSLLVERIQQRFNKTV---TVYGVPKLTSQTLIDCADNFV 154
>gi|255020942|ref|ZP_05292998.1| hypothetical protein ACA_1164 [Acidithiobacillus caldus ATCC 51756]
gi|254969733|gb|EET27239.1| hypothetical protein ACA_1164 [Acidithiobacillus caldus ATCC 51756]
Length = 336
Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 74/147 (50%), Gaps = 13/147 (8%)
Query: 5 REKIALFIDGANL-YASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
R+ I +++D N+ Y A+ +D+ L+ F R R T + E++
Sbjct: 6 RQGIGVYVDAENIRYNGGYAMRYDV-----LRRFAGRGDDARLLRLNTYMAIDEERLRRD 60
Query: 64 HPLLDWLH-YN------GFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHL 116
D + Y G++++ K + FT+ G + K++ D++LAVD QSE L+ +
Sbjct: 61 PDYRDGIRGYQQAVRDLGWKIIEKPVRWFTDEEGNRLSKANADLDLAVDVMLQSERLDQV 120
Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVS 143
++ +GDG F +V ALQ + +V +++
Sbjct: 121 LLVTGDGDFLQVVRALQNRGCRVEVLA 147
>gi|27366806|ref|NP_762333.1| hypothetical protein VV2_0365 [Vibrio vulnificus CMCP6]
gi|320158689|ref|YP_004191067.1| hypothetical protein VVM_01748 [Vibrio vulnificus MO6-24/O]
gi|27358373|gb|AAO07323.1| hypothetical protein VV2_0365 [Vibrio vulnificus CMCP6]
gi|319934001|gb|ADV88864.1| hypothetical protein VVMO6_03842 [Vibrio vulnificus MO6-24/O]
Length = 162
Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 15/162 (9%)
Query: 7 KIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
K+A+F+D N+Y + K DY + ++ V+ A+ Y DP Q+ H
Sbjct: 7 KVAIFVDVQNIYYTCKEKYRKHFDYNRFWQSATQGKQVVVAHAYAISSKDPGQR--QFHH 64
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
+L + GF V K + + K DV LA+DAFE + ++ +++ SGDG F
Sbjct: 65 ILRGI---GFDVKLKPFIQRWDGSA----KGDWDVGLALDAFEHAPMVDEVILLSGDGDF 117
Query: 126 TTLVAALQRKV-KKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
LV +Q+K KKVT+ P + + L+ D ++ +
Sbjct: 118 EILVERIQQKFGKKVTVYGV----PGLTAQNLQAVVDKYIPI 155
>gi|37676581|ref|NP_936977.1| hypothetical protein VVA0921 [Vibrio vulnificus YJ016]
gi|37201124|dbj|BAC96947.1| uncharacterized conserved protein [Vibrio vulnificus YJ016]
Length = 162
Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 15/162 (9%)
Query: 7 KIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
K+A+F+D N+Y + K DY + ++ V+ A+ Y DP Q+ H
Sbjct: 7 KVAIFVDVQNIYYTCKEKYRKHFDYNRFWQSATQDKQVVVAHAYAISSKDPGQR--QFHH 64
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
+L + GF V K + + K DV LA+DAFE + ++ +++ SGDG F
Sbjct: 65 ILRGI---GFDVKLKPFIQRWDGSA----KGDWDVGLALDAFEHAPMVDEVILLSGDGDF 117
Query: 126 TTLVAALQRKV-KKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
LV +Q+K KKVT+ P + + L+ D ++ +
Sbjct: 118 EILVERIQQKFGKKVTVYGV----PGLTAQNLQAVVDKYIPI 155
>gi|146293884|ref|YP_001184308.1| hypothetical protein Sputcn32_2790 [Shewanella putrefaciens CN-32]
gi|145565574|gb|ABP76509.1| protein of unknown function DUF88 [Shewanella putrefaciens CN-32]
Length = 157
Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 13/159 (8%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
+KIALF+D N+Y + + A G +YRKL + ++ A Y GD Q
Sbjct: 2 KKIALFVDVQNIYYTCREAYGRQFNYRKLWQHLGYEGDIVLAVAYAIHKGDDGQL----- 56
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
D L + GF+V K + ++ K DV + +D E + ++ +++ SGDG
Sbjct: 57 KFQDALKHIGFEVKLKPFIQRSDGS----AKGDWDVGITIDIMEAASEVDTVILLSGDGD 112
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163
F L LQ+ +K + + V P++ + LR A F
Sbjct: 113 FDLL---LQKIHQKYGVETQVYGVPTLTAKSLRDAASQF 148
>gi|319427256|gb|ADV55330.1| conserved hypothetical protein [Shewanella putrefaciens 200]
Length = 157
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 13/159 (8%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
+KIALF+D N+Y + + A G +YRKL + ++ A Y GD Q
Sbjct: 2 KKIALFVDVQNIYYTCREAYGRQFNYRKLWQHLGYEGDIVLAVAYAIHKGDDGQL----- 56
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
D L + GF+V K + ++ K DV + +D E + ++ +++ SGDG
Sbjct: 57 KFQDALKHIGFEVKLKPFIQRSDGSA----KGDWDVGITIDIMEAASEVDTVILLSGDGD 112
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163
F L LQ+ +K + + V P++ + LR A F
Sbjct: 113 FDLL---LQKIHQKYWVETQVYGVPTLTAKSLRDAASQF 148
>gi|89092681|ref|ZP_01165634.1| hypothetical protein MED92_15283 [Oceanospirillum sp. MED92]
gi|89083193|gb|EAR62412.1| hypothetical protein MED92_15283 [Oceanospirillum sp. MED92]
Length = 160
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Query: 7 KIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
KIA+F+D N+Y +++ A G +YRK +A ++ ++ A Y D Q+
Sbjct: 3 KIAIFVDVQNIYYTTRQAFGGSFNYRKFWQAISTQGEIVEANAYAIERADDGQK-----K 57
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
D L + GF V K + + K DV + +D EQ+ ++ +++ SGDG F
Sbjct: 58 FQDALRHIGFNVKLKPFIQRKDGTA----KGDWDVGITIDVLEQAAHVDKVILLSGDGDF 113
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
L+ + R KVT + V S ++ + L D++ +
Sbjct: 114 DLLLKKI-RSTYKVT--TEVYSIEALTAKSLISATDHYHSI 151
>gi|262274163|ref|ZP_06051975.1| hypothetical protein VHA_001139 [Grimontia hollisae CIP 101886]
gi|262221973|gb|EEY73286.1| hypothetical protein VHA_001139 [Grimontia hollisae CIP 101886]
Length = 161
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 79/162 (48%), Gaps = 13/162 (8%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
+KIA+F D N+Y +++ A G +YRKL + + V+ A Y + D +QQ
Sbjct: 6 KKIAVFADVQNVYYTTRQAYGRQFNYRKLWQRLQEMGDVVCANAYA-IRRDDDQQIK--- 61
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
D L + GF+V K + ++ K DV +A+D E + ++ +V+ SGDG
Sbjct: 62 -FQDALRHIGFEVKLKPYIQRSDGS----TKGDWDVGIAIDVMEMAPEVDTVVLLSGDGD 116
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
F L+ ++ + K IV V P + ++ L D F+ +
Sbjct: 117 FDLLMNKVRERYGKEAIVFGV---PMLTANSLINSVDRFIGI 155
>gi|269962746|ref|ZP_06177088.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269832501|gb|EEZ86618.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 163
Score = 53.9 bits (128), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 79/162 (48%), Gaps = 15/162 (9%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
++KIA+ +D N+Y + + A + DY + V+ A Y DP+Q+
Sbjct: 7 KQKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATQGKEVVSARAYAIASNDPKQR--QF 64
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
H +L + GF+V+ K + + K DV + +DA E + ++ +++ SGDG
Sbjct: 65 HHILRGV---GFEVMLKPYIQRRDGSA----KGDWDVGITLDAIEIAPEVDEVILVSGDG 117
Query: 124 CFTTLVAALQRKV-KKVTIVSTVLSDPSMASDQLRRQADYFM 164
F+ LV +Q++ KKVT+ P + S L AD+F+
Sbjct: 118 DFSLLVERIQQRFNKKVTVYGV----PRLTSQTLIDCADHFV 155
>gi|292655260|ref|YP_003535157.1| hypothetical protein HVO_1102 [Haloferax volcanii DS2]
gi|291371756|gb|ADE03983.1| Uncharacterized conserved protein [Haloferax volcanii DS2]
Length = 165
Score = 53.9 bits (128), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 83/169 (49%), Gaps = 14/169 (8%)
Query: 4 PREKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
P +++A+ D NLY ++++L +IDY LL+ + + RA Y + D + S
Sbjct: 6 PDQRVAILADAQNLYHTAQSLYSRNIDYSSLLQKGTAGRALTRAIAYV-IRADSPDEVSF 64
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
L+D GF+ K K F G K+ D+ +A+DA ++ ++ +V+ SGD
Sbjct: 65 FDALVDI----GFETKIKDIKTF----GDGSKKADWDLGIALDAVSLADHVDTVVLCSGD 116
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
G F L L+ + +V V++ +++L AD F+DL+ K
Sbjct: 117 GDFERLCTHLRHEGVRV----EVMAFKESTAEELVAAADTFIDLSERKE 161
>gi|152985348|ref|YP_001346543.1| hypothetical protein PSPA7_1157 [Pseudomonas aeruginosa PA7]
gi|150960506|gb|ABR82531.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
Length = 167
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 76/163 (46%), Gaps = 15/163 (9%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPL 63
+KIA+F D NLY + + A G ++Y L R ++ AY Y GDP +QQF +
Sbjct: 10 KKIAVFADVQNLYYTVRQAYGCHLNYAALWADIARRGRIVEAYAYAIDRGDPRQQQFQRI 69
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF V K + + K DV + +D + + ++ +V+ SGDG
Sbjct: 70 ------LRNLGFTVKLKPYIQRADGS----AKGDWDVGITIDVLDAAPRVDEVVLLSGDG 119
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
F L L++ ++ + ++ P + ++ L R A ++ +
Sbjct: 120 DFDLL---LEKVIRAHGVEASAYGVPGLTANALIRAASRYVPI 159
>gi|15605927|ref|NP_213304.1| hypothetical protein aq_430 [Aquifex aeolicus VF5]
gi|2983099|gb|AAC06705.1| hypothetical protein aq_430 [Aquifex aeolicus VF5]
Length = 183
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 13/159 (8%)
Query: 9 ALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
A+F+DG NLY K L ID K + F+ + ++Y + E+Q
Sbjct: 27 AIFVDGTNLYFIQKNFLNAKIDIVKFVNYFKQFYDIYNTFFYLAYKEEDEKQ----ERFF 82
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTT 127
L ++G VV K K+ + +K +DV++A+D + + ++ SGD F
Sbjct: 83 KLLAFSGITVVKKPVKQLKDG----SLKGDVDVDIAIDMLLTKDNYDTAILCSGDSDFER 138
Query: 128 LVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
LV L+ K+V VST +S +L D ++DL
Sbjct: 139 LVYVLRNFGKEVICVST----KESSSIELVNACDRYIDL 173
>gi|254432040|ref|ZP_05045743.1| DUF88 [Cyanobium sp. PCC 7001]
gi|197626493|gb|EDY39052.1| DUF88 [Cyanobium sp. PCC 7001]
Length = 219
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 37/198 (18%)
Query: 2 FDPREK-IALFIDGANLYASSKALGFDIDYRKLLKAFRSR-AIVIRAYYYTTVVGDPEQQ 59
F PR + + + +DG +++ + + LG+ D R+LL+ S+ + + ++ + DP Q
Sbjct: 13 FQPRPRQLVVAVDGHSMFYAQQKLGWFFDPRRLLRHASSQPGLELAGAFWYAGLKDPSDQ 72
Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCG---------------------------RK 92
P D L GF V + +E R
Sbjct: 73 ----RPFRDALTSLGFTVRTRPLRELAPPASNGSTQAADGEHRHPEPPRPTDQRPADQRH 128
Query: 93 RVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMA 152
V++++DVE+AVD + + + + SG LV L+ + ++T+++T M
Sbjct: 129 FVRANLDVEVAVDLMMVAPRTDEVWLLSGSRDLDRLVEVLRAQGVRITLMTTE----GMV 184
Query: 153 SDQLRRQADYFMDLAYLK 170
+ +LR AD F+DLA L+
Sbjct: 185 ARELRNAADGFVDLASLR 202
>gi|163803423|ref|ZP_02197297.1| hypothetical protein 1103602000421_AND4_08566 [Vibrio sp. AND4]
gi|159172772|gb|EDP57618.1| hypothetical protein AND4_08566 [Vibrio sp. AND4]
Length = 162
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 79/164 (48%), Gaps = 15/164 (9%)
Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
+ ++KIA+ +D N+Y + + A + DY + + V A Y DP+Q+
Sbjct: 4 ESKQKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATNGKEVASARAYAIASNDPKQR-- 61
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
H +L + GF+V+ K + + K DV + +DA E + ++ +++ SG
Sbjct: 62 QFHHILRGV---GFEVMLKPYIQRRDGSA----KGDWDVGITLDAIEAAAEVDEIILVSG 114
Query: 122 DGCFTTLVAALQRKV-KKVTIVSTVLSDPSMASDQLRRQADYFM 164
DG F+ LV +Q++ KKVT+ P + S L AD F+
Sbjct: 115 DGDFSMLVERIQQRFNKKVTVYGV----PKLTSQNLIDCADNFV 154
>gi|298246249|ref|ZP_06970055.1| protein of unknown function DUF88 [Ktedonobacter racemifer DSM
44963]
gi|297553730|gb|EFH87595.1| protein of unknown function DUF88 [Ktedonobacter racemifer DSM
44963]
Length = 933
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 48/173 (27%), Positives = 86/173 (49%), Gaps = 18/173 (10%)
Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYY--TTVVGDPEQQ 59
F E++ +F+D ANL S++ L +D+ KLL R ++RA Y T+ EQ
Sbjct: 771 FPSTERVGVFVDVANLLYSARTLRMSVDFGKLLDFLRGNRRLVRAQAYCPTSPQAGDEQM 830
Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLV 117
F L + G+++ K K F+ G K K+ +D++L +D EG ++ +V
Sbjct: 831 F------LQAVKGLGYRITTKNYKTFSS--GAK--KADLDLDLCMDVVRLVEGRAVDCIV 880
Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
+ SGD F ++ +V + + D +M++ LR+ D F++L+ L+
Sbjct: 881 LVSGDSDFMPMLDYCSDHGVRVEVAAF---DEAMSA-TLRQSCDLFVNLSLLE 929
>gi|229592764|ref|YP_002874883.1| hypothetical protein PFLU5385 [Pseudomonas fluorescens SBW25]
gi|229364630|emb|CAY52542.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
Length = 158
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 15/161 (9%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPL 63
+KIA+F D NLY + + A G +Y L SR ++ AY Y GD +QQF +
Sbjct: 2 KKIAVFADVQNLYYTVRQAYGCHFNYAALWADISSRGQIVEAYAYAIDRGDSKQQQFQQI 61
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF V K + ++ K DV + +D + ++ ++ +V+ SGDG
Sbjct: 62 ------LRNLGFTVKLKPYIQRSDGS----AKGDWDVGITIDIMDAADHVDEIVLASGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F L L R + K + + P + ++ L R A ++
Sbjct: 112 DFDML---LDRIINKHGVEAVAYGVPGLTANSLIRAASRYV 149
>gi|91224643|ref|ZP_01259904.1| hypothetical protein V12G01_07878 [Vibrio alginolyticus 12G01]
gi|91190531|gb|EAS76799.1| hypothetical protein V12G01_07878 [Vibrio alginolyticus 12G01]
Length = 162
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 76/163 (46%), Gaps = 13/163 (7%)
Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
+ ++KIA+ +D N+Y + + A + DY + V+ A Y DP+Q+
Sbjct: 4 ESKQKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATQGKEVVSARAYAIASNDPKQR-- 61
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
H +L + GF+V+ K + + K DV + +DA E + +E +++ SG
Sbjct: 62 QFHHILRGV---GFEVMLKPYIQRRDGSS----KGDWDVGITLDAIEIAPEVEEVILVSG 114
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
DG F+ LV +Q++ TV P + S L AD F+
Sbjct: 115 DGDFSLLVERIQQRFNNTV---TVYGVPKLTSQTLIDCADNFV 154
>gi|108805593|ref|YP_645530.1| hypothetical protein Rxyl_2805 [Rubrobacter xylanophilus DSM 9941]
gi|108766836|gb|ABG05718.1| protein of unknown function DUF88 [Rubrobacter xylanophilus DSM
9941]
Length = 189
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 72/134 (53%), Gaps = 6/134 (4%)
Query: 6 EKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF-SPL 63
E++A+F+DGANLY S K+ G +DY +LL+A + ++RA +Y + ++Q S
Sbjct: 7 ERVAVFVDGANLYHSIKSYYGGVLDYGRLLEAAVAGRRLLRATFYLVEKQEADEQVASST 66
Query: 64 HPLLDWLHYNGFQVVAK-VAKEFTENCGRKRV---KSSMDVELAVDAFEQSEGLEHLVIF 119
+ L+ G++V +K + T G +RV K DV + VD ++ + V+
Sbjct: 67 RSFVYNLNRFGYKVRSKPLTVHETTTPGVERVVSHKGDWDVGIVVDMIRLADHADTYVLV 126
Query: 120 SGDGCFTTLVAALQ 133
SGDG + +V LQ
Sbjct: 127 SGDGDYVEVVDYLQ 140
>gi|153001687|ref|YP_001367368.1| hypothetical protein Shew185_3175 [Shewanella baltica OS185]
gi|160876425|ref|YP_001555741.1| hypothetical protein Sbal195_3319 [Shewanella baltica OS195]
gi|217972380|ref|YP_002357131.1| hypothetical protein Sbal223_1195 [Shewanella baltica OS223]
gi|151366305|gb|ABS09305.1| protein of unknown function DUF88 [Shewanella baltica OS185]
gi|160861947|gb|ABX50481.1| protein of unknown function DUF88 [Shewanella baltica OS195]
gi|217497515|gb|ACK45708.1| protein of unknown function DUF88 [Shewanella baltica OS223]
gi|315268615|gb|ADT95468.1| hypothetical protein Sbal678_3326 [Shewanella baltica OS678]
Length = 157
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 73/159 (45%), Gaps = 13/159 (8%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
+KIALF+D N+Y + + A G +YRKL + + A Y GD Q
Sbjct: 2 KKIALFVDVQNIYYTCREAYGRQFNYRKLWQHLGYEGDIALAVAYAIHKGDDGQL----- 56
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
D L + GF+V K + ++ K DV + +D E + ++ +++ SGDG
Sbjct: 57 KFQDALKHIGFEVKLKPFIQRSDGS----AKGDWDVGITIDIMEAASEVDTVILLSGDGD 112
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163
F L LQ+ +K + + V P++ + LR A F
Sbjct: 113 FDLL---LQKIHQKYGVETQVYGVPTLTAKSLRDAASQF 148
>gi|225850534|ref|YP_002730768.1| RtsE [Persephonella marina EX-H1]
gi|225645811|gb|ACO03997.1| RtsE [Persephonella marina EX-H1]
Length = 179
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 85/175 (48%), Gaps = 14/175 (8%)
Query: 4 PREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
+++A+F+D NLY S++ + +++ +L + +++RA Y + +Q+
Sbjct: 12 KNQRVAVFLDIQNLYYSARDSFNRKVNFESVLDKVLNGRVLVRAIAYLVKLQGVDQK--- 68
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFT--ENCGR--KRVKSSMDVELAVDAFEQSEGLEHLVI 118
++ L + G+QV K K F + G +K+ D+ +A+DA +E ++ V+
Sbjct: 69 --GFINTLKHIGYQVRVKEPKIFKRLDEYGNLWTTIKADWDMGIAMDAISLAEKIDVAVL 126
Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
SGDG F LV L K KV I + A+ +L AD F+DL E+
Sbjct: 127 ASGDGDFADLVRYLHTKGVKVEIAAF----KQTAAKELIEVADEFIDLTAFGEEV 177
>gi|126175377|ref|YP_001051526.1| hypothetical protein Sbal_3176 [Shewanella baltica OS155]
gi|304410207|ref|ZP_07391826.1| hypothetical protein Sbal183DRAFT_1664 [Shewanella baltica OS183]
gi|307302082|ref|ZP_07581840.1| hypothetical protein Sbal175DRAFT_0340 [Shewanella baltica BA175]
gi|125998582|gb|ABN62657.1| protein of unknown function DUF88 [Shewanella baltica OS155]
gi|304351616|gb|EFM16015.1| hypothetical protein Sbal183DRAFT_1664 [Shewanella baltica OS183]
gi|306914120|gb|EFN44541.1| hypothetical protein Sbal175DRAFT_0340 [Shewanella baltica BA175]
Length = 157
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 73/159 (45%), Gaps = 13/159 (8%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
+KIALF+D N+Y + + A G +YRKL + + A Y GD Q
Sbjct: 2 KKIALFVDVQNIYYTCREAYGRQFNYRKLWQHLGYEGDIALAVAYAIHKGDDGQL----- 56
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
D L + GF+V K + ++ K DV + +D E + ++ +++ SGDG
Sbjct: 57 KFQDALKHIGFEVKLKPFIQRSDGS----AKGDWDVGITIDIMEAASEVDTVILLSGDGD 112
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163
F L LQ+ +K + + V P++ + LR A F
Sbjct: 113 FDLL---LQKIHQKYGVETQVYGVPTLTAKSLRDAASQF 148
>gi|163785396|ref|ZP_02180018.1| hypothetical protein HG1285_09231 [Hydrogenivirga sp. 128-5-R1-1]
gi|159879334|gb|EDP73216.1| hypothetical protein HG1285_09231 [Hydrogenivirga sp. 128-5-R1-1]
Length = 186
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 15/168 (8%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-----EQQF 60
EKIA+FID N++ +S I+Y+KL++ R ++RAY+YT V ++Q+
Sbjct: 22 EKIAIFIDAGNMFHASNYYKIKINYKKLVEFLRRDRWLLRAYFYTGVPTQDLDKSLKEQW 81
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVI 118
L+ L G +V K+ E ++ +DV LA D + + ++
Sbjct: 82 KKQKGFLNELQNLGIKVKTMPLKKTPEGF----IEKGVDVLLATDMVSLAFRNAYDTAIL 137
Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
SGD + +V +Q K+V S +S +LR+ D F+ L
Sbjct: 138 VSGDSDYVPVVEEIQELGKRVENASF----KRTSSFELRKVCDRFILL 181
>gi|262404166|ref|ZP_06080721.1| hypothetical protein VOA_002156 [Vibrio sp. RC586]
gi|262349198|gb|EEY98336.1| hypothetical protein VOA_002156 [Vibrio sp. RC586]
Length = 157
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 83/165 (50%), Gaps = 15/165 (9%)
Query: 6 EKIALFIDGANLYASSKA-LGFDIDYRKLL-KAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
EKIA+ +D N+Y + + G DY + +A + RA+V +A Y DP+Q+
Sbjct: 2 EKIAILVDVQNVYYTCRERYGRHFDYNQFWSQATQGRAVV-KANAYAIASKDPQQR--QF 58
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
H +L + GF+V+ K + ++ K DV +A+D +E ++ ++ +V+ SGDG
Sbjct: 59 HHILRGI---GFEVMLKPFIQRSDGSA----KGDWDVGIALDGYELAQEVDTVVLVSGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
F LV +Q++ + + V P + + L A+ F + +
Sbjct: 112 DFEPLVTRIQQRFQ---VKVEVYGVPKLTAQNLIDVANQFHPIEH 153
>gi|119946864|ref|YP_944544.1| hypothetical protein Ping_3258 [Psychromonas ingrahamii 37]
gi|119865468|gb|ABM04945.1| hypothetical protein DUF88 [Psychromonas ingrahamii 37]
Length = 157
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 10/123 (8%)
Query: 7 KIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
KIA+F D N+Y +++ A G +YRKL + + ++ AY Y GD +Q+
Sbjct: 3 KIAVFADVQNIYYTTRQAYGKQFNYRKLWQQLEQQGDIVSAYAYAIERGDNQQK-----K 57
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
D L + GF+V K + ++ K DV + +D E + ++ +++ SGDG F
Sbjct: 58 FQDVLTHLGFEVKLKPFIQRSDGTA----KGDWDVGITIDIMETAPQVDTIILLSGDGDF 113
Query: 126 TTL 128
L
Sbjct: 114 AIL 116
>gi|313680485|ref|YP_004058224.1| hypothetical protein Ocepr_1598 [Oceanithermus profundus DSM 14977]
gi|313153200|gb|ADR37051.1| protein of unknown function DUF88 [Oceanithermus profundus DSM
14977]
Length = 189
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 80/173 (46%), Gaps = 20/173 (11%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVV--GDPEQQFSPL 63
+++ALFIDG+ +Y +K +G+++D+RK+++ F S + A+YY + D QQ
Sbjct: 2 DRLALFIDGSFVYNCAKRMGWNVDHRKVIEHFPSGFALFNAFYYAPITDWNDERQQ---- 57
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
LD L + G+ V ++ + S + +A D + + ++ SG
Sbjct: 58 -KFLDALIFMGYSVRSREVRG---------EAPSFEAHIATDLLITAPRWDVALLASGAA 107
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
V A++ K+V + L P + +R D F+DL + + R+
Sbjct: 108 QLVPAVEAVRTMGKEVHL----LGIPELVDLDIRSATDRFIDLKEYRELLERE 156
>gi|297567046|ref|YP_003686018.1| hypothetical protein Mesil_2661 [Meiothermus silvanus DSM 9946]
gi|296851495|gb|ADH64510.1| protein of unknown function DUF88 [Meiothermus silvanus DSM 9946]
Length = 181
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 87/175 (49%), Gaps = 12/175 (6%)
Query: 6 EKIALFIDGANLY---ASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
E++A+FIDG+NLY SS + + +D+ + ++ + ++RAYYY + +
Sbjct: 2 ERVAVFIDGSNLYKGLVSSLSSDYRLDFVQFIETLVAGRKLLRAYYYNAPLPVEDPAAKA 61
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFS 120
L++L + V ++ + E G V+ +D+++A+D + + + V+ S
Sbjct: 62 HQSFLNYLKRVPY-VAVRLGR--LERRGEGFVEKGVDIQIAIDLLKLAYANAYDVAVLVS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
GDG F +V +Q K+V + +++S +L +QAD F L L E R
Sbjct: 119 GDGDFADVVKVIQDMGKQVENSTF----QALSSHRLAQQADRFFPLDELPWERLR 169
>gi|15789664|ref|NP_279488.1| hypothetical protein VNG0419C [Halobacterium sp. NRC-1]
gi|169235378|ref|YP_001688578.1| hypothetical protein OE1626F [Halobacterium salinarum R1]
gi|10580028|gb|AAG18968.1| conserved hypothetical protein [Halobacterium sp. NRC-1]
gi|167726444|emb|CAP13229.1| conserved hypothetical protein [Halobacterium salinarum R1]
Length = 165
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 82/166 (49%), Gaps = 16/166 (9%)
Query: 4 PREKIALFIDGANLYASSKAL-GFDIDYRKLL-KAFRSRAIVIRAYYYTTVVGDPEQQFS 61
P +++A+ D NLY S++++ +IDY LL K + R + Y + E +F
Sbjct: 6 PAQRVAVLADSQNLYHSAQSVYSQNIDYAALLDKGVQDRELTRAIAYVIRAQSEDEDRF- 64
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
D L GF+ K K F G K+ DV +++DA ++ ++ +V+ +G
Sbjct: 65 -----FDALRDIGFETKIKAIKTF----GDGSKKADWDVGMSLDAVSLADHIDTIVLCTG 115
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
DG F+ L L+ + +V +++ S A+ +L AD F+DL+
Sbjct: 116 DGDFSRLCRHLRHEGVRVEVMAFEES----AATELVDAADSFVDLS 157
>gi|153832763|ref|ZP_01985430.1| protein of unknown function [Vibrio harveyi HY01]
gi|156976905|ref|YP_001447811.1| hypothetical protein VIBHAR_05689 [Vibrio harveyi ATCC BAA-1116]
gi|148870897|gb|EDL69787.1| protein of unknown function [Vibrio harveyi HY01]
gi|156528499|gb|ABU73584.1| hypothetical protein VIBHAR_05689 [Vibrio harveyi ATCC BAA-1116]
Length = 162
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 79/164 (48%), Gaps = 15/164 (9%)
Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
+ ++KIA+ +D N+Y + + A + DY + V+ A Y DP+Q+
Sbjct: 4 ESKQKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATQGKEVVSARAYAIASNDPKQR-- 61
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
H +L + GF+V+ K + + K DV + +DA E + ++ +++ SG
Sbjct: 62 QFHHILRGV---GFEVMLKPYIQRRDGSA----KGDWDVGITLDAIEIAPEVDEVILVSG 114
Query: 122 DGCFTTLVAALQRKV-KKVTIVSTVLSDPSMASDQLRRQADYFM 164
DG F+ LV +Q++ KKVT+ P + S L AD F+
Sbjct: 115 DGDFSLLVERIQQRFNKKVTVYGV----PKLTSQTLIDCADNFV 154
>gi|117919529|ref|YP_868721.1| hypothetical protein Shewana3_1080 [Shewanella sp. ANA-3]
gi|117611861|gb|ABK47315.1| protein of unknown function DUF88 [Shewanella sp. ANA-3]
Length = 170
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 15/162 (9%)
Query: 4 PREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ-QFS 61
P +KIALF+D N+Y + + A +YRKL + ++ ++ A Y GD Q +F
Sbjct: 13 PLKKIALFVDVQNIYYTCREAYQRQFNYRKLWQQLSAQGEIVSAIAYAIHRGDDGQLKFQ 72
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
D L + GF++ K + ++ K DV + +D E + ++ +++ SG
Sbjct: 73 ------DALRHIGFELKLKPFIQRSDGSA----KGDWDVGITIDVLEMAPEVDTVILLSG 122
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163
DG F L+ ++ +K I + V PS+ + L A F
Sbjct: 123 DGDFALLLDKIR---QKYAIEAEVYGVPSLTAKSLMDAATRF 161
>gi|146284019|ref|YP_001174172.1| hypothetical protein PST_3707 [Pseudomonas stutzeri A1501]
gi|145572224|gb|ABP81330.1| conserved hypothetical protein [Pseudomonas stutzeri A1501]
Length = 197
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 72/161 (44%), Gaps = 16/161 (9%)
Query: 6 EKIALFIDGANLYAS-SKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPL 63
+KIALF D NLY + +A G +Y L R ++ AY Y GDP +QQF +
Sbjct: 41 KKIALFADVQNLYYTVRQAHGCHFNYSALWADVSRRGTIVEAYAYAIERGDPRQQQFQQI 100
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF V K + ++ K DV + +D + + ++ +V+ SGDG
Sbjct: 101 ------LRKLGFTVKLKPYIQRSDGS----AKGDWDVGITIDVLDAAARVDEVVLASGDG 150
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F L+ +V+ +T P + + L R A ++
Sbjct: 151 DFDLLL----ERVRAGGAEATAYGVPGLTAQSLIRAATRYV 187
>gi|257051312|ref|YP_003129145.1| protein of unknown function DUF88 [Halorhabdus utahensis DSM 12940]
gi|256690075|gb|ACV10412.1| protein of unknown function DUF88 [Halorhabdus utahensis DSM 12940]
Length = 165
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 83/166 (50%), Gaps = 16/166 (9%)
Query: 4 PREKIALFIDGANLYASSKAL-GFDIDYRKLLKA-FRSRAIVIRAYYYTTVVGDPEQQFS 61
P +++A+ D NLY ++++L +IDY +LL A R R + Y D E++F
Sbjct: 6 PGQRVAVLADSQNLYHTAQSLYQQNIDYGELLDAAVRDRQLTRAIAYVIRADADDEERF- 64
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
D L GF+ AK K F + G K K+ DV +++DA + ++ + + +G
Sbjct: 65 -----FDALEDIGFETKAKDIKTFAD--GSK--KADWDVGMSLDAVTLAPHVDTIALCTG 115
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
DG F LV ++ + +V VLS S++L A+ + DL+
Sbjct: 116 DGDFARLVTHVRHEGVRV----EVLSFGESTSEELLDVAEDYTDLS 157
>gi|153214272|ref|ZP_01949289.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|229515202|ref|ZP_04404662.1| hypothetical protein VCB_002859 [Vibrio cholerae TMA 21]
gi|297579334|ref|ZP_06941262.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|124115420|gb|EAY34240.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|229347907|gb|EEO12866.1| hypothetical protein VCB_002859 [Vibrio cholerae TMA 21]
gi|297536928|gb|EFH75761.1| conserved hypothetical protein [Vibrio cholerae RC385]
Length = 157
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 13/164 (7%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
EKIA+ +D N+Y + + G DY + V++A Y DP+Q+ H
Sbjct: 2 EKIAILVDVQNVYYTCREQYGRHFDYNQFWSQVTQNRTVVKANAYAIASKDPQQR--QFH 59
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
+L + GF+V+ K + ++ K DV +A+D +E ++ ++ +V+ SGDG
Sbjct: 60 HILRGI---GFEVMLKPFIQRSDGSA----KGDWDVGIALDGYELAQEVDTVVLVSGDGD 112
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
F LV R ++ + V P + + L A F + +
Sbjct: 113 FEPLVT---RIAQRFQVKVEVYGVPKLTAQHLIDVASQFHPIEH 153
>gi|15641813|ref|NP_231445.1| hypothetical protein VC1811 [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121585837|ref|ZP_01675631.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|121727642|ref|ZP_01680745.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|147673789|ref|YP_001217351.1| hypothetical protein VC0395_A1407 [Vibrio cholerae O395]
gi|153817839|ref|ZP_01970506.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|153821111|ref|ZP_01973778.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|153828564|ref|ZP_01981231.1| conserved hypothetical protein [Vibrio cholerae 623-39]
gi|227081940|ref|YP_002810491.1| hypothetical protein VCM66_1734 [Vibrio cholerae M66-2]
gi|229508089|ref|ZP_04397594.1| hypothetical protein VCF_003323 [Vibrio cholerae BX 330286]
gi|229511672|ref|ZP_04401151.1| hypothetical protein VCE_003081 [Vibrio cholerae B33]
gi|229518811|ref|ZP_04408254.1| hypothetical protein VCC_002836 [Vibrio cholerae RC9]
gi|229520283|ref|ZP_04409709.1| hypothetical protein VIF_000801 [Vibrio cholerae TM 11079-80]
gi|229607650|ref|YP_002878298.1| hypothetical protein VCD_002562 [Vibrio cholerae MJ-1236]
gi|254285238|ref|ZP_04960203.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|254848901|ref|ZP_05238251.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|255745423|ref|ZP_05419372.1| hypothetical protein VCH_001771 [Vibrio cholera CIRS 101]
gi|262147203|ref|ZP_06028007.1| hypothetical protein VIG_000056 [Vibrio cholerae INDRE 91/1]
gi|262169804|ref|ZP_06037495.1| hypothetical protein VIJ_003057 [Vibrio cholerae RC27]
gi|9656336|gb|AAF94959.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121549975|gb|EAX59993.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|121630029|gb|EAX62436.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|126511659|gb|EAZ74253.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|126521307|gb|EAZ78530.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|146315672|gb|ABQ20211.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|148875959|gb|EDL74094.1| conserved hypothetical protein [Vibrio cholerae 623-39]
gi|150424510|gb|EDN16446.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|227009828|gb|ACP06040.1| conserved hypothetical protein [Vibrio cholerae M66-2]
gi|227013710|gb|ACP09920.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|229342649|gb|EEO07641.1| hypothetical protein VIF_000801 [Vibrio cholerae TM 11079-80]
gi|229343500|gb|EEO08475.1| hypothetical protein VCC_002836 [Vibrio cholerae RC9]
gi|229351637|gb|EEO16578.1| hypothetical protein VCE_003081 [Vibrio cholerae B33]
gi|229355594|gb|EEO20515.1| hypothetical protein VCF_003323 [Vibrio cholerae BX 330286]
gi|229370305|gb|ACQ60728.1| hypothetical protein VCD_002562 [Vibrio cholerae MJ-1236]
gi|254844606|gb|EET23020.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|255737253|gb|EET92649.1| hypothetical protein VCH_001771 [Vibrio cholera CIRS 101]
gi|262022038|gb|EEY40748.1| hypothetical protein VIJ_003057 [Vibrio cholerae RC27]
gi|262031360|gb|EEY49970.1| hypothetical protein VIG_000056 [Vibrio cholerae INDRE 91/1]
gi|327484370|gb|AEA78777.1| hypothetical protein VCLMA_A1565 [Vibrio cholerae LMA3894-4]
Length = 157
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 13/164 (7%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
EKIA+ +D N+Y + + G DY + V++A Y DP+Q+ H
Sbjct: 2 EKIAILVDVQNVYYTCREQYGRHFDYNQFWSQVTQNRTVVKANAYAIASKDPQQR--QFH 59
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
+L + GF+V+ K + ++ K DV +A+D +E ++ ++ +V+ SGDG
Sbjct: 60 HILRGI---GFEVMLKPFIQRSDGSA----KGDWDVGIALDGYELAQEVDTVVLVSGDGD 112
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
F LV R ++ + V P + + L A F + +
Sbjct: 113 FEPLVT---RIAQRFQVKVEVYGVPKLTAQHLIDVASQFHPIEH 153
>gi|153800465|ref|ZP_01955051.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
gi|124124091|gb|EAY42834.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
Length = 157
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 13/164 (7%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
EKIA+ +D N+Y + + G DY + V++A Y DP+Q+ H
Sbjct: 2 EKIAILVDVQNVYYTCREQYGRHFDYNQFWSQVTQNRTVVKANAYAIASKDPQQR--QFH 59
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
+L + GF+V+ K + ++ K DV +A+D +E ++ ++ +V+ SGDG
Sbjct: 60 HILRGI---GFEVMLKPFIQRSDGSA----KGDWDVGIALDGYELAQEVDTVVLVSGDGD 112
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
F LV R ++ + V P + + L A F + +
Sbjct: 113 FEPLVT---RIAQRFQVKVEVYGVPKLTAQHLIDVASQFHPIEH 153
>gi|90408478|ref|ZP_01216637.1| hypothetical protein PCNPT3_03246 [Psychromonas sp. CNPT3]
gi|90310410|gb|EAS38536.1| hypothetical protein PCNPT3_03246 [Psychromonas sp. CNPT3]
Length = 157
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 10/141 (7%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
+KIA+F D N+Y +S+ A +YRKL + + + + A+ Y GD +QQ
Sbjct: 2 KKIAIFADVQNIYYTSRDAYKKSFNYRKLWQQIKEQGDICYAFAYAIDKGDRQQQ----- 56
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
D L + GF++ K + + C K DV + +D + + ++ +++ SGDG
Sbjct: 57 KFQDVLRHLGFEI---KLKPYIQRCD-GSAKGDWDVGITIDIMQIAPRVDCIILLSGDGD 112
Query: 125 FTTLVAALQRKVKKVTIVSTV 145
F L+ + ++ K T V V
Sbjct: 113 FAILLETVNKRDKVETQVYGV 133
>gi|198282948|ref|YP_002219269.1| hypothetical protein Lferr_0812 [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218667530|ref|YP_002425151.1| hypothetical protein AFE_0663 [Acidithiobacillus ferrooxidans ATCC
23270]
gi|198247469|gb|ACH83062.1| protein of unknown function DUF88 [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218519743|gb|ACK80329.1| conserved hypothetical protein [Acidithiobacillus ferrooxidans ATCC
23270]
Length = 318
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 72/144 (50%), Gaps = 13/144 (9%)
Query: 8 IALFIDGANL-YASSKALGFDIDYRKLLKAFRSR---AIVIRAYYYTTVVGDPEQQFSPL 63
I +++D N+ Y A+ +D+ L+ F R A ++R Y V G+ ++
Sbjct: 8 IGVYVDAENIRYNGGYAMRYDV-----LRRFAGREEEARLLRLNTYMAVDGERMKRDREY 62
Query: 64 HPLLDWLHYN----GFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119
+ G++++ K + F + G K++ D++LAVD QSE L+ +++
Sbjct: 63 RERIRGYQQAVRDLGWKIIEKPVRWFVDEEGNSMSKANADLDLAVDVMLQSERLDQVLLV 122
Query: 120 SGDGCFTTLVAALQRKVKKVTIVS 143
+GDG F +V ALQ K +V +++
Sbjct: 123 TGDGDFLQVVRALQNKGCRVEVLA 146
>gi|288939925|ref|YP_003442165.1| hypothetical protein Alvin_0164 [Allochromatium vinosum DSM 180]
gi|288895297|gb|ADC61133.1| protein of unknown function DUF88 [Allochromatium vinosum DSM 180]
Length = 277
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 70/144 (48%), Gaps = 12/144 (8%)
Query: 7 KIALFIDGANL-YASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS---- 61
++ +F+D N+ Y + +DI L+ F +R + T + D E+
Sbjct: 6 RVGVFVDAENVRYNGGYQMRYDI-----LRRFAAREGGVLQRLNTYMAYDAERAREDYEY 60
Query: 62 --PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119
H + G+++ AK + +T++ G K++ D+++AVDA Q+ L+ +++
Sbjct: 61 KKKAHAYQQMVRDFGWKITAKTVRRYTDDNGNVTTKANADLDMAVDAMLQANRLDQVLLV 120
Query: 120 SGDGCFTTLVAALQRKVKKVTIVS 143
+GDG F +V ALQ +V ++
Sbjct: 121 TGDGDFLQVVEALQNTGCRVELIG 144
>gi|330504961|ref|YP_004381830.1| hypothetical protein MDS_4047 [Pseudomonas mendocina NK-01]
gi|328919247|gb|AEB60078.1| hypothetical protein MDS_4047 [Pseudomonas mendocina NK-01]
Length = 159
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 71/161 (44%), Gaps = 16/161 (9%)
Query: 6 EKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPL 63
+KIA+F D NLY + + + G DY L R +++ AY Y GD +QQF +
Sbjct: 2 KKIAVFADVQNLYYTVRQVHGCHFDYSVLWAEVSRRGVIVEAYAYAIDRGDAKQQQFQQI 61
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF V K + + K DV + +D + E ++ +V+ SGDG
Sbjct: 62 ------LRKLGFTVKLKPYIQRADGSA----KGDWDVGITIDVLDAVERVDEIVLASGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F L+ +V+ + + P + + L R A ++
Sbjct: 112 DFDLLL----ERVRSRGVEAIAFGAPGLTAQSLIRAASLYV 148
>gi|163782049|ref|ZP_02177048.1| hypothetical protein HG1285_17989 [Hydrogenivirga sp. 128-5-R1-1]
gi|159882581|gb|EDP76086.1| hypothetical protein HG1285_17989 [Hydrogenivirga sp. 128-5-R1-1]
Length = 165
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 79/169 (46%), Gaps = 13/169 (7%)
Query: 6 EKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
++ +FIDG NLY K L ID KL++ F+ + ++Y + ++Q
Sbjct: 2 KRAGIFIDGTNLYFVQKNFLHRKIDIVKLVEYFKRFYSIYNVFFYLAYREEDDKQ----E 57
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
L ++G VV K K + +K ++DVE+ +D + + V+ SGD
Sbjct: 58 KFYRMLAFSGITVVRKPLKHLPDGS----LKGNLDVEIVIDMLLTKDNYDVAVLCSGDSD 113
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
F L+ L+ K+V VST D S S ++ AD ++DL + EI
Sbjct: 114 FEKLINVLRSFGKEVVCVST--RDSS--SIEVVNAADRYIDLRDIIEEI 158
>gi|91791739|ref|YP_561390.1| hypothetical protein Sden_0372 [Shewanella denitrificans OS217]
gi|91713741|gb|ABE53667.1| protein of unknown function DUF88 [Shewanella denitrificans OS217]
Length = 184
Score = 51.2 bits (121), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 15/167 (8%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
+KIALF+D N+Y + + A G +YRKL + + +++A Y GD Q
Sbjct: 29 KKIALFVDVQNIYYTCREAYGRQFNYRKLWQLVSQQGEIVQAVAYAIHKGDDGQL----- 83
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
D L + GF+V K F + K DV + +D E + + +++ SGDG
Sbjct: 84 KFQDALKHIGFEV---KLKPFIQRA-DGSAKGDWDVGITIDVMEAAADVNTVILLSGDGD 139
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF--MDLAYL 169
F L+ + +K T V V PS+ + L A F +D ++L
Sbjct: 140 FDRLLVKIYQKHGVDTQVYGV---PSLTAKSLMDSAGQFHPIDASWL 183
>gi|312963199|ref|ZP_07777683.1| protein of unknown function DUF88 [Pseudomonas fluorescens WH6]
gi|311282465|gb|EFQ61062.1| protein of unknown function DUF88 [Pseudomonas fluorescens WH6]
Length = 158
Score = 51.2 bits (121), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 15/161 (9%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPL 63
+KIA+F D NLY + + A G +Y L +R ++ AY Y GD +QQF +
Sbjct: 2 KKIAVFADVQNLYYTVRQAYGCHFNYAALWADISARGQIVEAYAYAIDRGDSKQQQFQQI 61
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF V K + + K DV + +D + ++ ++ +V+ SGDG
Sbjct: 62 ------LRNLGFTVKLKPYIQRADGS----AKGDWDVGITLDIMDAADHVDEVVLASGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F L L+R + K + + P + ++ L R A ++
Sbjct: 112 DFDML---LERIIHKHGVHAVAYGVPGLTANSLIRAASRYV 149
>gi|115360984|ref|YP_778121.1| hypothetical protein Bamb_6243 [Burkholderia ambifaria AMMD]
gi|115286312|gb|ABI91787.1| protein of unknown function DUF88 [Burkholderia ambifaria AMMD]
Length = 272
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 77/146 (52%), Gaps = 16/146 (10%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLK-AFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
++ +++DG+++ A+ L + Y L A R+ A + R + Y + +++ + P
Sbjct: 6 RVGVYVDGSSMDANGGHL---MRYEVLRSLAGRAGATIQRLHAYLSF----DERRAARSP 58
Query: 66 LLDW--------LHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLV 117
D L GF+V K + + ++ G + VKS+ D+ +A+DA +S+ L+ ++
Sbjct: 59 DYDARIKGYQAALRDKGFRVTIKPLRHYADDDGTETVKSNSDLGMAIDALSESDRLDTVL 118
Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVS 143
I + DG F +V ALQ+K +V ++
Sbjct: 119 IATSDGDFVEVVRALQKKGCRVEVLG 144
>gi|330976912|gb|EGH76935.1| hypothetical protein PSYAP_09660 [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 158
Score = 50.8 bits (120), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 15/163 (9%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPL 63
+KIA+F D NLY + + A G +Y L R R ++ A+ Y GD +QQF +
Sbjct: 2 KKIAVFADVQNLYYTVRQAHGCHFNYAALWADIRKRGEIVHAFAYAIDRGDSKQQQFQQI 61
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF V K + ++ K DV + +D + + ++ +V+ SGDG
Sbjct: 62 ------LRNLGFTVRLKPYIQRSDGS----AKGDWDVGITIDIMDFAPQVDEIVLASGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
F L L+R + K + + P + ++ L R A ++ +
Sbjct: 112 DFDML---LERVISKHGVEAVAYGVPGLTANSLIRAASRYVPI 151
>gi|46200099|ref|YP_005766.1| hypothetical protein TTC1797 [Thermus thermophilus HB27]
gi|55980158|ref|YP_143455.1| hypothetical protein TTHA0189 [Thermus thermophilus HB8]
gi|46197727|gb|AAS82139.1| hypothetical conserved protein [Thermus thermophilus HB27]
gi|55771571|dbj|BAD70012.1| conserved hypothetical protein [Thermus thermophilus HB8]
Length = 181
Score = 50.8 bits (120), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 87/170 (51%), Gaps = 20/170 (11%)
Query: 6 EKIALFIDGANLYAS-SKALGFD-----IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
E++A+FIDG+NLY + LG D +++ LL A R ++RAYYY + PE
Sbjct: 2 ERVAIFIDGSNLYKGLVQHLGSDYRLNFVEFITLLTAGRK---LLRAYYYNAPL-PPEDP 57
Query: 60 FSPLH-PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHL 116
+ H L++L + V ++ + E V+ +D+++AVD + +
Sbjct: 58 AAKAHQSFLNYLKRVPY-VTVRLGR--LERRADGFVEKGVDIQIAVDMLRLAFVNAYDIA 114
Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
V+ SGDG F +V +Q K+V +T +++S +L +QAD+F L
Sbjct: 115 VLVSGDGDFAEVVRVVQDLGKQVE--NTTFH--ALSSHRLAQQADHFYPL 160
>gi|114046654|ref|YP_737204.1| hypothetical protein Shewmr7_1148 [Shewanella sp. MR-7]
gi|113888096|gb|ABI42147.1| protein of unknown function DUF88 [Shewanella sp. MR-7]
Length = 157
Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 76/161 (47%), Gaps = 15/161 (9%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ-QFSPL 63
+KIALF+D N+Y + + A +YRKL + ++ ++ A Y GD Q +F
Sbjct: 2 KKIALFVDVQNIYYTCREAYQRQFNYRKLWQQLSTQGEIVSAIAYAIHRGDDGQLKFQ-- 59
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
D L + GF++ K + ++ K DV + +D E + ++ +++ SGDG
Sbjct: 60 ----DALRHIGFELKLKPFIQRSDGSA----KGDWDVGITIDVLEMAPEVDTVILLSGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F L L + +K + + V PS+ + L A F+
Sbjct: 112 DFALL---LDKIRQKYAVEAEVYGVPSLTAKSLMDAATQFI 149
>gi|257389218|ref|YP_003178991.1| hypothetical protein Hmuk_3179 [Halomicrobium mukohataei DSM 12286]
gi|257171525|gb|ACV49284.1| protein of unknown function DUF88 [Halomicrobium mukohataei DSM
12286]
Length = 165
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 16/166 (9%)
Query: 4 PREKIALFIDGANLYASSKALGF-DIDYRKLL-KAFRSRAIVIRAYYYTTVVGDPEQQFS 61
P +++ + D NLY ++++L +IDY LL +A RA+ RA Y P+++
Sbjct: 6 PGQRVGVLADAQNLYHTARSLHTRNIDYEALLDEAVNDRALT-RAIAYVIRANSPDEE-- 62
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
+ L GF+ K K F G K+ DV +++DA + ++ +V+ +G
Sbjct: 63 ---SFFEALEDIGFETRIKDIKTF----GDGSKKADWDVGMSLDAVSLAPHVDTVVLITG 115
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
DG F L L+ + K V T+ + S A ++L AD+F +L+
Sbjct: 116 DGDFARLCRYLRHEGVK---VETMGFEESTA-EELVEAADHFRNLS 157
>gi|153826226|ref|ZP_01978893.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|149739991|gb|EDM54166.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
Length = 157
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 13/164 (7%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
EKIA+ +D N+Y + + G +Y + V++A Y DP+Q+ H
Sbjct: 2 EKIAILVDVQNVYYTCREQYGRHFEYNQFWSQVTQNRTVVKANAYAIASKDPQQR--QFH 59
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
+L + GF+V+ K + ++ K DV +A+D +E ++ ++ +V+ SGDG
Sbjct: 60 HILRGI---GFEVMLKPFIQRSDGSA----KGDWDVGIALDGYELAQEVDTVVLVSGDGD 112
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
F LV R ++ + V P + + L A F + +
Sbjct: 113 FEPLVT---RIAQRFQVKVEVYGVPKLTAQHLIDVASQFHPIEH 153
>gi|288817663|ref|YP_003432010.1| hypothetical protein HTH_0343 [Hydrogenobacter thermophilus TK-6]
gi|288787062|dbj|BAI68809.1| hypothetical protein HTH_0343 [Hydrogenobacter thermophilus TK-6]
gi|308751261|gb|ADO44744.1| protein of unknown function DUF88 [Hydrogenobacter thermophilus
TK-6]
Length = 199
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 17/171 (9%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGD-------PE- 57
E++ +FIDG+NL+ + + L IDY+KL+ +IRAY+Y + + PE
Sbjct: 4 ERVIIFIDGSNLFHAIRYLNIRIDYQKLVDFLTEGRRLIRAYFYGAMPHEKDVKKNTPEW 63
Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEH 115
+ L+ L G +V K+ + V+ +D+ LA D + +
Sbjct: 64 ESLLRQKRFLEELSLMGIKVKTAHLKKLPSG---EYVEKEVDIMLATDMLSMAYMNTYDT 120
Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
V+ SGD ++ V +QR KKV S +S QLR+ D F+ L
Sbjct: 121 AVLISGDSDYSYTVEEVQRIGKKVENASF----KRTSSYQLRKACDRFILL 167
>gi|332306977|ref|YP_004434828.1| hypothetical protein Glaag_2619 [Glaciecola agarilytica
4H-3-7+YE-5]
gi|332174306|gb|AEE23560.1| hypothetical protein Glaag_2619 [Glaciecola agarilytica
4H-3-7+YE-5]
Length = 158
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Query: 7 KIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
KIA+F+D N+Y +++ + +YRK + ++ ++ A Y T D +QQ
Sbjct: 4 KIAVFVDVQNIYYTTRDSYQKQFNYRKFWQHLSAQGDIVIANAYATERHDTQQQ-----K 58
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
L + GF V K + ++ K DV + +D + + ++ +V+ SGDG F
Sbjct: 59 FQSALKHIGFNVKLKPFIQRSDGSA----KGDWDVGITIDVLDAAPHVDTVVLLSGDGDF 114
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
L+ A + K K T V V P++ + L D F+++
Sbjct: 115 DLLLKAAKDKYKVGTKVYGV---PALTASSLMNACDEFIEI 152
>gi|86608534|ref|YP_477296.1| hypothetical protein CYB_1055 [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557076|gb|ABD02033.1| conserved hypothetical protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 382
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 77/164 (46%), Gaps = 14/164 (8%)
Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
PR+ + +FID ANL+AS++ G +DY LL + + Y+ V ++
Sbjct: 211 PRKALGVFIDAANLHASAQQWGSHLDYPSLLSWLAQGRSEMEVHVYSGV----DRHNLAQ 266
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L L G++VV K + K+++D EL VD E +++ SGDG
Sbjct: 267 RRFLRELRKQGYRVVTKPVVIHADGSR----KANLDGELIVDLMALHSHYETVLLLSGDG 322
Query: 124 CFTTLVAALQRKVKKVTIVS-TVLSDPSMASDQLRRQADYFMDL 166
F + ++R+ ++ + + ++P++ R AD F+DL
Sbjct: 323 DFVPALKHIRRQGCRLEVAAYRPNTNPALI-----RIADQFVDL 361
>gi|261211879|ref|ZP_05926166.1| hypothetical protein VCJ_002142 [Vibrio sp. RC341]
gi|260839229|gb|EEX65861.1| hypothetical protein VCJ_002142 [Vibrio sp. RC341]
Length = 157
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 79/165 (47%), Gaps = 15/165 (9%)
Query: 6 EKIALFIDGANLYASSKA-LGFDIDYRKLL-KAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
EKIA+ +D N+Y + + G DY + +A + RA+V +A Y DP+Q+
Sbjct: 2 EKIAILVDVQNVYYTCRERYGRHFDYNQFWSQATQGRAVV-KANAYAIASKDPQQR--QF 58
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
H +L + GF+V+ K + ++ K DV +A+D +E ++ + +V+ SGDG
Sbjct: 59 HHILRGI---GFEVMLKPFIQRSDGSA----KGDWDVGIALDGYELAQEVNTVVLVSGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
F LV R ++ + V P + + L A F + +
Sbjct: 112 DFEPLVT---RIAQRFQVKVEVYGVPKLTAQHLIDVASQFHPIEH 153
>gi|113969424|ref|YP_733217.1| hypothetical protein Shewmr4_1080 [Shewanella sp. MR-4]
gi|113884108|gb|ABI38160.1| protein of unknown function DUF88 [Shewanella sp. MR-4]
Length = 184
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 76/163 (46%), Gaps = 15/163 (9%)
Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ-QF 60
+P ++IALF+D N+Y + + A +Y KL + ++ ++ A Y GD Q +F
Sbjct: 26 NPLKRIALFVDVQNIYYTCREAYQRQFNYCKLWQQLSAQGEIVSAIAYAIHRGDDGQLKF 85
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
D L + GF++ K + ++ K DV + +D E + ++ +++ S
Sbjct: 86 Q------DALRHIGFELKLKPFIQRSDG----SAKGDWDVGITIDVLEMAPEVDTVILLS 135
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163
GDG F L L + +K I + V PS+ + L A F
Sbjct: 136 GDGDFALL---LDKIRQKYAIEAEVYGVPSLTAKSLMEAASCF 175
>gi|67921188|ref|ZP_00514707.1| Protein of unknown function DUF88 [Crocosphaera watsonii WH 8501]
gi|67857305|gb|EAM52545.1| Protein of unknown function DUF88 [Crocosphaera watsonii WH 8501]
Length = 134
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 8/107 (7%)
Query: 69 WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTL 128
W+ NG++V+AK + + G K K+++DVE+AVD + +I SGDG
Sbjct: 14 WMRRNGYRVIAKDLVQLPD--GSK--KANLDVEIAVDLMALVGSYDTAIIVSGDGDLAYA 69
Query: 129 VAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
++ + ++ +VS SM SD L AD ++DL +K +I +
Sbjct: 70 ADSVSYRGARIEVVSL----RSMTSDSLINVADRYIDLDQIKEDIQK 112
>gi|218296000|ref|ZP_03496780.1| protein of unknown function DUF88 [Thermus aquaticus Y51MC23]
gi|218243738|gb|EED10266.1| protein of unknown function DUF88 [Thermus aquaticus Y51MC23]
Length = 181
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 87/170 (51%), Gaps = 20/170 (11%)
Query: 6 EKIALFIDGANLYAS-SKALGFD-----IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
E++A+FIDG+NLY + LG D +++ LL A R ++RAYYY + PE
Sbjct: 2 ERVAIFIDGSNLYKGLVQHLGSDYRLNFVEFITLLTAGRK---LLRAYYYNAPL-PPEDP 57
Query: 60 FSPLH-PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHL 116
+ H L++L + V ++ + E V+ +D+++A+D ++ +
Sbjct: 58 AAKAHQSFLNYLKRVPY-VAVRLGR--LERRAEGFVEKGVDIQIAIDILRLAYADAYDIA 114
Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
++ SGDG F +V +Q K+V +T +++S +L +QAD F L
Sbjct: 115 ILVSGDGDFAEVVRVVQDMGKQVE--NTTFH--ALSSHRLAQQADRFYPL 160
>gi|104783731|ref|YP_610229.1| hypothetical protein PSEEN4789 [Pseudomonas entomophila L48]
gi|95112718|emb|CAK17446.1| conserved hypothetical protein [Pseudomonas entomophila L48]
Length = 167
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 73/163 (44%), Gaps = 15/163 (9%)
Query: 6 EKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPL 63
+KIALF D NLY + + + G +Y L ++ A Y GD +QQF +
Sbjct: 10 KKIALFADVQNLYYTVRQVHGCHFNYTTLWAEVSREGQIVEAVAYAIDRGDSKQQQFQQI 69
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF+V K + + K DV + +D E +E ++ +V+ SGDG
Sbjct: 70 ------LRNLGFEVRLKPYIQRADGSA----KGDWDVGITLDVIEAAERVDQVVLASGDG 119
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
F L L+R K+ + + V P + + L R A ++ +
Sbjct: 120 DFDLL---LERAAKRHGVETVVYGVPGLTALSLIRSASRYVPI 159
>gi|157960982|ref|YP_001501016.1| hypothetical protein Spea_1154 [Shewanella pealeana ATCC 700345]
gi|157845982|gb|ABV86481.1| protein of unknown function DUF88 [Shewanella pealeana ATCC 700345]
Length = 157
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 75/162 (46%), Gaps = 13/162 (8%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
++IALF+D N+Y + + A G +YRKL + V +A Y GD Q
Sbjct: 2 KRIALFVDVQNIYYTCRQAYGKQFNYRKLWQHLGYEGDVSQATAYAIHRGDDGQL----- 56
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
D L + GF+V K + ++ K DV + +D E + ++ +++ SGDG
Sbjct: 57 KFQDALKHIGFEVKLKPFIQRSDGS----AKGDWDVGITIDIMEAASEVDCVILLSGDGD 112
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
F L +QR +K + + V P++ + L + F ++
Sbjct: 113 FDLL---MQRIHQKYGVETQVYGVPTLTAKSLIDSVNQFHEI 151
>gi|320449117|ref|YP_004201213.1| hypothetical protein TSC_c00110 [Thermus scotoductus SA-01]
gi|320149286|gb|ADW20664.1| hypothetical protein TSC_c00110 [Thermus scotoductus SA-01]
Length = 181
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 87/170 (51%), Gaps = 20/170 (11%)
Query: 6 EKIALFIDGANLYAS-SKALGFD-----IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
E++A+FIDG+NLY + LG D +++ LL A R ++RAYYY + PE
Sbjct: 2 ERVAIFIDGSNLYKGLVQHLGPDYRLNFVEFISLLTAGRR---LLRAYYYNAPL-PPEDP 57
Query: 60 FSPLH-PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHL 116
+ H L++L + V ++ + E V+ +D+++A+D ++ +
Sbjct: 58 AAKAHQSFLNYLKRVPY-VAVRLGR--LERRADGFVEKGVDIQIAIDILRLAYADAYDVA 114
Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
V+ SGDG F +V +Q K+V +T +++S +L +QAD F L
Sbjct: 115 VLVSGDGDFAEVVKVVQDMGKQVE--NTTFH--ALSSHRLAQQADRFYPL 160
>gi|167623131|ref|YP_001673425.1| hypothetical protein Shal_1197 [Shewanella halifaxensis HAW-EB4]
gi|167353153|gb|ABZ75766.1| protein of unknown function DUF88 [Shewanella halifaxensis HAW-EB4]
Length = 172
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 13/162 (8%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
+KIALF+D N+Y + + A G +YRKL + + A Y GD Q
Sbjct: 17 KKIALFVDVQNIYYTCRQAYGRQFNYRKLWQHLGYEGNISAATAYAIHRGDDGQL----- 71
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
D L + GF+V K + ++ K DV + +D E + ++ +++ SGDG
Sbjct: 72 KFQDALKHIGFEVKLKPFIQRSDG----SAKGDWDVGITIDIMEAASEVDCVILLSGDGD 127
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
F L +Q+ +K I + V PS+ + L + F ++
Sbjct: 128 FDLL---MQKIKQKYGIETQVYGVPSLTAKSLIDSVEQFHEI 166
>gi|323497755|ref|ZP_08102770.1| hypothetical protein VISI1226_04395 [Vibrio sinaloensis DSM 21326]
gi|323317231|gb|EGA70227.1| hypothetical protein VISI1226_04395 [Vibrio sinaloensis DSM 21326]
Length = 160
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 13/160 (8%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
EKIA+F+D N+Y +++ + DY + V+ A Y DP+Q+ H
Sbjct: 2 EKIAIFVDVQNIYYTTRDKYRANFDYNQFWYVATEGQQVVSASAYAIASTDPKQR--QFH 59
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
+L + GF V K + ++ K DV +A+D +E + ++ +++ SGDG
Sbjct: 60 HILRGI---GFDVKLKPYIQRSDGS----TKGDWDVGIALDVYELASQVDRVILLSGDGD 112
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F LV +Q++ V V P + + L D F+
Sbjct: 113 FEMLVTRIQQRFATKVDVYAV---PGLTAQNLIDVCDKFI 149
>gi|55377125|ref|YP_134975.1| hypothetical protein rrnAC0208 [Haloarcula marismortui ATCC 43049]
gi|55229850|gb|AAV45269.1| unknown [Haloarcula marismortui ATCC 43049]
Length = 165
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 82/165 (49%), Gaps = 14/165 (8%)
Query: 4 PREKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
P +++A+ D NLY ++++L +IDY LL+ + RA Y PE++ S
Sbjct: 6 PGQRVAVLADAQNLYHTARSLYSRNIDYEALLEEAVDGRELTRAIAYVIRADSPEEE-SF 64
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
L+D GF+ K K F + G K K+ DV +++DA + ++ +V+ +GD
Sbjct: 65 FEALVDI----GFETRIKDIKTFQD--GSK--KADWDVGMSLDAVSLANHVDTVVLCTGD 116
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
G F + L+ + +V + S +S+ L+ D F+D++
Sbjct: 117 GDFARVCRYLRHEGCRVEAMGFEES----SSEDLKAAVDGFIDMS 157
>gi|319959088|gb|ADV90708.1| LabA [Nostoc linckia EC108]
Length = 127
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 57/105 (54%), Gaps = 8/105 (7%)
Query: 73 NGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAAL 132
NG++V+AK + + G K K+++DVE+AVD + + V+ SGDG V ++
Sbjct: 2 NGYRVIAKDLVQLPD--GSK--KANLDVEIAVDMMALVDSYDTAVLVSGDGDLAYAVNSV 57
Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
+ +V +VS SM SD L +D ++DL +K +I + P
Sbjct: 58 SYRGVRVEVVSL----RSMTSDSLINVSDRYIDLEAIKEDIQKTP 98
>gi|323492730|ref|ZP_08097874.1| hypothetical protein VIBR0546_00630 [Vibrio brasiliensis LMG 20546]
gi|323313105|gb|EGA66225.1| hypothetical protein VIBR0546_00630 [Vibrio brasiliensis LMG 20546]
Length = 160
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 62/131 (47%), Gaps = 10/131 (7%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
EK+A+F+D N+Y +++ + DY + V+ A Y DP+Q+ H
Sbjct: 2 EKVAIFVDVQNIYYTTRDKYRANFDYNQFWYIATEGREVVSANAYAIASHDPKQR--QFH 59
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
+L + +N ++ N G K DV LA+D FE + ++ +++ SGDG
Sbjct: 60 HILRGIGFN-----VQLKPFIQRNDGS--AKGDWDVGLALDVFETASQVDRVILLSGDGD 112
Query: 125 FTTLVAALQRK 135
F LV +Q +
Sbjct: 113 FDVLVDRIQSR 123
>gi|77461146|ref|YP_350653.1| hypothetical protein Pfl01_4925 [Pseudomonas fluorescens Pf0-1]
gi|77385149|gb|ABA76662.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
Length = 159
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 15/161 (9%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPL 63
+KIA+F D NLY + + A G +Y L ++ AY Y GD +QQF +
Sbjct: 2 KKIAVFADVQNLYYTVRQAYGCHFNYAALWADVSQHGQIVEAYAYAIDRGDSKQQQFQQI 61
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF V K + ++ K DV + +D + ++ ++ +V+ SGDG
Sbjct: 62 ------LRNLGFTVKLKPYIQRSDGS----AKGDWDVGITLDIMDAADHVDEIVLASGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F L L+R + K + + P + ++ L R A ++
Sbjct: 112 DFDML---LERIINKHGVQAVAYGVPGLTANSLIRAASRYV 149
>gi|163783881|ref|ZP_02178857.1| hypothetical protein HG1285_05285 [Hydrogenivirga sp. 128-5-R1-1]
gi|159880844|gb|EDP74372.1| hypothetical protein HG1285_05285 [Hydrogenivirga sp. 128-5-R1-1]
Length = 174
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 81/175 (46%), Gaps = 14/175 (8%)
Query: 4 PREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
+++A+F+D NLY S++ +D+ K+L + +IRA Y + +Q+
Sbjct: 7 KNQRVAVFLDVQNLYYSARDVFNRKVDFEKVLFKILNGRQLIRALAYIIKLQGVDQK--- 63
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFT----ENCGRKRVKSSMDVELAVDAFEQSEGLEHLVI 118
+ L + G+++ K K + E +K+ D+ +A+DA +E ++ V+
Sbjct: 64 --GFISSLKHIGYEIKEKEPKIYKRLDEEGNLITTIKADWDMGIAMDAISIAEKIDVAVL 121
Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
+GDG F LV L K KV I + + +L D F+DL + EI
Sbjct: 122 TTGDGDFADLVKYLHTKGVKVEIAAF----KQTTAKELIEVCDEFIDLTHFGEEI 172
>gi|322369896|ref|ZP_08044458.1| hypothetical protein ZOD2009_10415 [Haladaptatus paucihalophilus
DX253]
gi|320550232|gb|EFW91884.1| hypothetical protein ZOD2009_10415 [Haladaptatus paucihalophilus
DX253]
Length = 165
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 16/166 (9%)
Query: 4 PREKIALFIDGANLYASSKAL-GFDIDYRKLL-KAFRSRAIVIRAYYYTTVVGDPEQQFS 61
P +++ + D NLY +++++ +IDY LL KA + R + RA Y P++
Sbjct: 6 PGQRVTVLADAQNLYHTAQSVYSRNIDYSSLLSKAAQDRELT-RAIAYVIQADSPDED-- 62
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
D L GF+ K K F G K+ DV + +DA + ++ +V+ +G
Sbjct: 63 ---RFFDALTDIGFEAKIKAIKTF----GDGSKKADWDVGICLDAITLAPKVDTVVLCTG 115
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
DG F L L+ + +V ++ S +++L AD F+DL+
Sbjct: 116 DGDFAQLATHLRHEGVRVEVMGFQES----TAEELIAAADSFIDLS 157
>gi|146308745|ref|YP_001189210.1| hypothetical protein Pmen_3730 [Pseudomonas mendocina ymp]
gi|145576946|gb|ABP86478.1| protein of unknown function DUF88 [Pseudomonas mendocina ymp]
Length = 159
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 16/161 (9%)
Query: 6 EKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPL 63
+KIA+F D NLY + + + G DY L R ++ AY Y GD +QQF +
Sbjct: 2 KKIAVFADVQNLYYTVRQVHGCHFDYSVLWAEVSRRGVIAEAYAYAIDRGDAKQQQFQQI 61
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF V K + + K DV + +D + E ++ +V+ SGDG
Sbjct: 62 ------LRKLGFTVKLKPYIQRADGSA----KGDWDVGITIDVLDALERVDEIVLASGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F L+ +V+ + + P + + L R A ++
Sbjct: 112 DFDLLL----ERVRSRGVEAIAFGVPGLTAQSLIRAASLYV 148
>gi|260773921|ref|ZP_05882836.1| hypothetical protein VIB_002400 [Vibrio metschnikovii CIP 69.14]
gi|260610882|gb|EEX36086.1| hypothetical protein VIB_002400 [Vibrio metschnikovii CIP 69.14]
Length = 157
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 10/133 (7%)
Query: 6 EKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
EKIA+ +D N+Y + + G +Y + + V +A Y +P+Q+ H
Sbjct: 2 EKIAILVDVQNVYYTCRERYGRHFNYNQFWQQVTQGRHVFKANAYAIASKEPQQR--QFH 59
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
+L + GF+V+ K + ++ K DV +A+DA+E ++ ++ +V+ SGDG
Sbjct: 60 HILRGV---GFEVMLKPFIQRSDGSA----KGDWDVGIALDAYELAQQVDTVVLVSGDGD 112
Query: 125 FTTLVAALQRKVK 137
F LV +Q++ +
Sbjct: 113 FEPLVERIQQRFQ 125
>gi|229523840|ref|ZP_04413245.1| hypothetical protein VCA_001419 [Vibrio cholerae bv. albensis
VL426]
gi|229337421|gb|EEO02438.1| hypothetical protein VCA_001419 [Vibrio cholerae bv. albensis
VL426]
Length = 157
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 13/164 (7%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
EKIA+ +D N+Y + + G DY + V++A Y P+Q+ H
Sbjct: 2 EKIAILVDVQNVYYTCREQYGRHFDYNQFWSQVTQNRTVVKANAYAIASKAPQQR--QFH 59
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
+L + GF+V+ K + ++ K DV +A+D +E ++ ++ +V+ SGDG
Sbjct: 60 HILRGI---GFEVMLKPFIQRSDGSA----KGDWDVGIALDGYELAQEVDTVVLVSGDGD 112
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
F LV R ++ + V P + + L A F + +
Sbjct: 113 FEPLVT---RIAQRFQVKVEVYGVPKLTAQHLIDVASQFHPIEH 153
>gi|229529164|ref|ZP_04418554.1| hypothetical protein VCG_002257 [Vibrio cholerae 12129(1)]
gi|229332938|gb|EEN98424.1| hypothetical protein VCG_002257 [Vibrio cholerae 12129(1)]
Length = 157
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 13/164 (7%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
EKIA+ +D N+Y + + G DY + V++A Y P+Q+ H
Sbjct: 2 EKIAILVDVQNVYYTCREQYGRHFDYNQFWSQVTQNRTVVKANAYAIASKAPQQR--QFH 59
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
+L + GF+V+ K + ++ K DV +A+D +E ++ ++ +V+ SGDG
Sbjct: 60 HILRGI---GFEVMLKPFIQRSDGSA----KGDWDVGIALDGYELAQEVDTVVLVSGDGD 112
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
F LV R ++ + V P + + L A F + +
Sbjct: 113 FEPLVT---RIAQRFQVKVEVYGVPKLTAQHLIDVASQFHPIEH 153
>gi|163751027|ref|ZP_02158258.1| hypothetical protein KT99_04722 [Shewanella benthica KT99]
gi|161329188|gb|EDQ00187.1| hypothetical protein KT99_04722 [Shewanella benthica KT99]
Length = 159
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 13/164 (7%)
Query: 4 PREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
+KIA+F+D N+Y + + A G +YRKL + + ++ A Y GD Q
Sbjct: 2 TNKKIAIFVDVQNIYYTCRQAYGRQFNYRKLWQHIGHKGDIVSATAYAIHKGDEGQL--- 58
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
D L + GF + K + ++ K DV +A+D E + ++ +++ SGD
Sbjct: 59 --KFQDALKHIGFDIKLKPFIQRSDG----SAKGDWDVGIAIDVMEAAAEVDTIILLSGD 112
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
G F L+ + +K T V V P++ + L + F+++
Sbjct: 113 GDFDLLMLKIYQKYGVDTQVYGV---PALTAKSLIDASCKFIEI 153
>gi|330969505|gb|EGH69571.1| hypothetical protein PSYAR_03309 [Pseudomonas syringae pv. aceris
str. M302273PT]
Length = 158
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 15/163 (9%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPL 63
+KIA+F D NLY + + A G +Y L R ++ A+ Y GD +QQF +
Sbjct: 2 KKIAVFADVQNLYYTVRQAHGCHFNYAALWADISKRGEIVHAFAYAIDRGDSKQQQFQQI 61
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF V K + ++ K DV + +D + + ++ +V+ SGDG
Sbjct: 62 ------LRNLGFTVRLKPYIQRSDGS----AKGDWDVGITIDIMDYAPQVDEIVLASGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
F L L+R + K + + P + ++ L R A ++ +
Sbjct: 112 DFDML---LERVISKHGVEAVAYGVPGLTANSLIRAASRYVPI 151
>gi|330811889|ref|YP_004356351.1| hypothetical protein PSEBR_a4925 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327379997|gb|AEA71347.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 159
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 15/161 (9%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPL 63
+KIA+F D NLY + + A G +Y L + ++ AY Y GD +QQF +
Sbjct: 2 KKIAVFADVQNLYYTVRQAYGCHFNYAALWADVSKQGQIVEAYAYAIDRGDSKQQQFQQI 61
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF V K + ++ K DV + +D + ++ ++ +V+ SGDG
Sbjct: 62 ------LRNLGFIVKLKPYIQRSDGS----AKGDWDVGITLDIMDAADHVDEVVLASGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F L L+R ++K + + P + ++ L R A ++
Sbjct: 112 DFDML---LERIIQKHGVQAVAYGVPGLTANSLIRAASRYV 149
>gi|70732718|ref|YP_262481.1| hypothetical protein PFL_5413 [Pseudomonas fluorescens Pf-5]
gi|68347017|gb|AAY94623.1| conserved hypothetical protein [Pseudomonas fluorescens Pf-5]
Length = 159
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 15/161 (9%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPL 63
+KIA+F D NLY + + A G +Y L + ++ AY Y GD +QQF +
Sbjct: 2 KKIAVFADVQNLYYTVRQAYGCHFNYAALWADISKQGQIVEAYAYAIDRGDSKQQQFQQI 61
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF V K + ++ K DV + +D + + ++ +V+ SGDG
Sbjct: 62 ------LRNLGFTVKLKPYIQRSDGS----AKGDWDVGITIDIMDAAAHVDEVVLASGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F L L+R + K + + P + ++ L R A ++
Sbjct: 112 DFDLL---LERIIHKHGVSAVAYGVPGLTANSLIRAATRYV 149
>gi|261253046|ref|ZP_05945619.1| hypothetical protein VIA_003071 [Vibrio orientalis CIP 102891]
gi|260936437|gb|EEX92426.1| hypothetical protein VIA_003071 [Vibrio orientalis CIP 102891]
Length = 160
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 72/160 (45%), Gaps = 13/160 (8%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
E +A+F+D N+Y +++ + DY + + +A Y DP+Q+ H
Sbjct: 2 ETVAIFVDVQNIYYTTRDKYRANFDYNQFWYIATEGKQIEQANAYAISSHDPKQR--QFH 59
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
+L + GF V K + + K DV +A+D FE +E ++ +++ SGDG
Sbjct: 60 HILRGI---GFNVNLKPFIQRMDGSA----KGDWDVGIALDVFEAAEKVDRVILLSGDGD 112
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F LV +Q K V V P + + L +D F+
Sbjct: 113 FEILVQRIQEKFNTKVDVYGV---PGLTAQSLIDASDRFI 149
>gi|313679213|ref|YP_004056952.1| hypothetical protein Ocepr_0319 [Oceanithermus profundus DSM 14977]
gi|313151928|gb|ADR35779.1| protein of unknown function DUF88 [Oceanithermus profundus DSM
14977]
Length = 173
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 81/166 (48%), Gaps = 12/166 (7%)
Query: 6 EKIALFIDGANLY---ASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
E++A+FIDG+NLY S+ + +D+ K ++ + ++RAYYY + +
Sbjct: 2 ERVAIFIDGSNLYKGLVSTLGSEYRLDFVKFIETLVAGRKLLRAYYYNAPLPTEDAASRA 61
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFS 120
L++L + V ++ + E G V+ +D+++AVD + + V+ S
Sbjct: 62 HQSFLNYLKRVPY-VSVRLGR--LERRGDTFVEKGVDIQIAVDMLRLAYARAYDVGVLVS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
GDG F +V +Q +V + +++S +L +QAD F L
Sbjct: 119 GDGDFAEVVRVIQDMGMQVENATF----HALSSYRLAQQADRFYPL 160
>gi|289548415|ref|YP_003473403.1| hypothetical protein Thal_0643 [Thermocrinis albus DSM 14484]
gi|289182032|gb|ADC89276.1| protein of unknown function DUF88 [Thermocrinis albus DSM 14484]
Length = 196
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 13/144 (9%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGD-------PE- 57
E++ +FIDG+NL+ + + L IDY KL++ R ++RAY+Y V + PE
Sbjct: 2 ERVVIFIDGSNLFHAIRYLNIKIDYSKLVEFLREDRKLVRAYFYGAVPQERDVKRNTPEW 61
Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEH 115
+ L+ L G +V ++ + ++ +D+ LA D + +
Sbjct: 62 ESLLRQRRFLEELSLMGIKVKTAPLRKLPTG---EYLEKEVDIMLATDMLSMAYMNVYDT 118
Query: 116 LVIFSGDGCFTTLVAALQRKVKKV 139
++ SGD F+ V +QR K+V
Sbjct: 119 AILVSGDSDFSYTVEEVQRIGKRV 142
>gi|127512105|ref|YP_001093302.1| hypothetical protein Shew_1173 [Shewanella loihica PV-4]
gi|126637400|gb|ABO23043.1| protein of unknown function DUF88 [Shewanella loihica PV-4]
Length = 157
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 73/160 (45%), Gaps = 15/160 (9%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ-QFSPL 63
++IALF+D N+Y + + A G +Y + + + ++ A Y GD Q +F
Sbjct: 2 KRIALFVDVQNIYYTCRQAYGRQFNYHAMWQRLNEQGEIVTALAYAIDRGDDGQIKFQ-- 59
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
D L + GF+V K + ++ K DV + +D E + ++ +V+ SGDG
Sbjct: 60 ----DALKHIGFEVKLKPYIQRSDGS----AKGDWDVGITIDIMEHAPEVDTVVLLSGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163
F L+ + RK T V V P +++ L A F
Sbjct: 112 DFALLLEHIGRKYSLETEVYGV---PELSAKALMDAATQF 148
>gi|171315862|ref|ZP_02905092.1| protein of unknown function DUF88 [Burkholderia ambifaria MEX-5]
gi|171098958|gb|EDT43746.1| protein of unknown function DUF88 [Burkholderia ambifaria MEX-5]
Length = 131
Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 70 LHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLV 129
L GF+V K + + + G + VKS+ D+ +A+DA +S+ L+ ++I + DG F +V
Sbjct: 56 LRDKGFRVTIKPLRHYADEDGTETVKSNSDLGMAIDALSESDRLDTVLIATSDGDFVEVV 115
Query: 130 AALQRK 135
ALQ+K
Sbjct: 116 RALQKK 121
>gi|328949646|ref|YP_004366981.1| Domain of unknown function DUF88 [Marinithermus hydrothermalis DSM
14884]
gi|328449970|gb|AEB10871.1| Domain of unknown function DUF88 [Marinithermus hydrothermalis DSM
14884]
Length = 174
Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 6 EKIALFIDGANLY---ASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
++IA+F+DG+NLY S+ + +D+ + +++ + ++RAYYY + +
Sbjct: 2 DRIAIFMDGSNLYKGLVSTLGPDYRLDFVRFIESLVAGRKLLRAYYYNAPLPSEDPASKA 61
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFS 120
L++L + V ++ + E G V+ +D+++AVD + + V+ S
Sbjct: 62 HQSFLNYLKRVPY-VAVRLGR--LERRGDTFVEKGVDIQIAVDMLRLAYARAYDVAVLVS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
GDG F +V +Q +V +T +++S +L +QAD F L
Sbjct: 119 GDGDFAEVVRVVQDMGMQVE--NTTFQ--ALSSYRLAQQADRFYPL 160
>gi|330446321|ref|ZP_08309973.1| putative uncharacterized protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328490512|dbj|GAA04470.1| putative uncharacterized protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 159
Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 15/163 (9%)
Query: 6 EKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ-QFSPL 63
EK+A+F+D N+Y + + + DY +I AY Y GD +Q QF +
Sbjct: 2 EKVAIFVDVQNIYYTVREKYHANFDYNAFWSEVSQDREIIAAYAYAIHKGDEKQRQFQNI 61
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF V K + ++ K DV + +D E + ++ +++ SGDG
Sbjct: 62 ------LRAIGFDVKLKPFIQRSDGSA----KGDWDVGITLDVIEHAPEVDRIILLSGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
F LV +Q K + V V P + + L A ++ ++
Sbjct: 112 DFDLLVEKVQTKYNAIVEVYGV---PGLTAASLINSATHYREI 151
>gi|330895533|gb|EGH27843.1| hypothetical protein PSYJA_01969 [Pseudomonas syringae pv. japonica
str. M301072PT]
gi|330938177|gb|EGH41874.1| hypothetical protein PSYPI_05358 [Pseudomonas syringae pv. pisi
str. 1704B]
gi|330961649|gb|EGH61909.1| hypothetical protein PMA4326_24166 [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 158
Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 15/163 (9%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPL 63
+KIA+F D NLY + + A G +Y L R ++ A+ Y GD +QQF +
Sbjct: 2 KKIAVFADVQNLYYTVRQAHGCHFNYAALWADISKRGEIVHAFAYAIDRGDSKQQQFQQI 61
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF V K + ++ K DV + +D + + ++ +V+ SGDG
Sbjct: 62 ------LRNLGFTVRLKPYIQRSDGS----AKGDWDVGITIDIMDFAPQVDEIVLASGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
F L L+R + K + + P + ++ L R A ++ +
Sbjct: 112 DFDML---LERVISKHGVEAVAYGVPGLTANSLIRAASRYVPI 151
>gi|66047528|ref|YP_237369.1| hypothetical protein Psyr_4301 [Pseudomonas syringae pv. syringae
B728a]
gi|302184786|ref|ZP_07261459.1| hypothetical protein Psyrps6_00540 [Pseudomonas syringae pv.
syringae 642]
gi|63258235|gb|AAY39331.1| Protein of unknown function DUF88 [Pseudomonas syringae pv.
syringae B728a]
Length = 158
Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 15/163 (9%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPL 63
+KIA+F D NLY + + A G +Y L R ++ A+ Y GD +QQF +
Sbjct: 2 KKIAVFADVQNLYYTVRQAHGCHFNYAALWADISKRGEIVHAFAYAIDRGDSKQQQFQQI 61
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF V K + ++ K DV + +D + + ++ +V+ SGDG
Sbjct: 62 ------LRNLGFTVRLKPYIQRSDGS----AKGDWDVGITIDIMDFAPQVDEIVLASGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
F L L+R + K + + P + ++ L R A ++ +
Sbjct: 112 DFDML---LERVISKHGVEAVAYGVPGLTANSLIRAASRYVPI 151
>gi|254507966|ref|ZP_05120094.1| conserved hypothetical protein [Vibrio parahaemolyticus 16]
gi|219549074|gb|EED26071.1| conserved hypothetical protein [Vibrio parahaemolyticus 16]
Length = 161
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 63/131 (48%), Gaps = 10/131 (7%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
EKIA+F+D N+Y +++ + DY + V+ A Y DP+Q+ H
Sbjct: 2 EKIAIFVDVQNIYYTTRDKYRANFDYNEFWYLATEGKEVVEAKAYAIASTDPKQR--QFH 59
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
+L + GF V K + + K DV +A+D +E + ++ +++ SGDG
Sbjct: 60 HILRGI---GFDVKLKPYIQRADGS----TKGDWDVGIALDVYEAANKVDRVILLSGDGD 112
Query: 125 FTTLVAALQRK 135
F LV +Q++
Sbjct: 113 FEILVERIQQR 123
>gi|332139998|ref|YP_004425736.1| hypothetical protein MADE_1002950 [Alteromonas macleodii str. 'Deep
ecotype']
gi|327550020|gb|AEA96738.1| hypothetical protein MADE_1002950 [Alteromonas macleodii str. 'Deep
ecotype']
Length = 156
Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
+K L +D N+Y + + A + +Y + + + A+ Y GD +Q+
Sbjct: 2 KKALLLVDVQNVYYTCRQAYKRNFNYNRFWRELSYNLDIEHAFAYAIDKGDSKQR----- 56
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
+ L GF+V K + + K DV + VDA E + ++ +++ SGDG
Sbjct: 57 EFQNILRAIGFEVKLKPFIQRADGSA----KGDWDVGITVDALEHASQVDEIILVSGDGD 112
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F LV AL+ K K VT+ P++ ++ +++ A ++
Sbjct: 113 FDILVNALKEKGKTVTVYGV----PALTAESIQKVATRYV 148
>gi|110834666|ref|YP_693525.1| hypothetical protein ABO_1805 [Alcanivorax borkumensis SK2]
gi|110647777|emb|CAL17253.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
Length = 160
Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 12/130 (9%)
Query: 1 MFDPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
M+ PR IA+F D N+Y +++ A G +YR L + ++ ++ A Y T GD Q
Sbjct: 1 MYMPR--IAVFADVQNIYYTTRQAFGRPFNYRALWQLLSAQGEIVHALAYATHRGDDGQT 58
Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119
D L + GF V K + ++ K DV +AVD + ++ +V+
Sbjct: 59 -----KFQDALKHIGFTVKLKPYIQRSDGSS----KGDWDVGIAVDVMTLAPEVDTVVLL 109
Query: 120 SGDGCFTTLV 129
SGDG F L+
Sbjct: 110 SGDGDFDVLL 119
>gi|237801480|ref|ZP_04589941.1| hypothetical protein POR16_21831 [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331024339|gb|EGI04396.1| hypothetical protein POR16_21831 [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 158
Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 15/163 (9%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPL 63
+KIA+F D NLY + + A G +Y L R ++ A+ Y GD +QQF +
Sbjct: 2 KKIAVFADVQNLYYTVRQAHGCHFNYAALWADISKRGEIVHAFAYAIDRGDSKQQQFQQI 61
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF V K + ++ K DV + +D + + ++ +V+ SGDG
Sbjct: 62 ------LRNLGFTVRLKPYIQRSDGS----AKGDWDVGITIDIMDFAPQVDEVVLASGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
F L L R + K + + P + ++ L R A ++ +
Sbjct: 112 DFDML---LDRVISKHGVAAVAYGVPGLTANSLIRAASRYVPI 151
>gi|71736408|ref|YP_276474.1| hypothetical protein PSPPH_4358 [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|257482175|ref|ZP_05636216.1| hypothetical protein PsyrptA_02837 [Pseudomonas syringae pv. tabaci
ATCC 11528]
gi|289675840|ref|ZP_06496730.1| hypothetical protein PsyrpsF_21381 [Pseudomonas syringae pv.
syringae FF5]
gi|298488862|ref|ZP_07006887.1| hypothetical protein PSA3335_4345 [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|71556961|gb|AAZ36172.1| uncharacterized conserved protein [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|298156615|gb|EFH97710.1| hypothetical protein PSA3335_4345 [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|320322652|gb|EFW78745.1| hypothetical protein PsgB076_22027 [Pseudomonas syringae pv.
glycinea str. B076]
gi|320330563|gb|EFW86542.1| hypothetical protein PsgRace4_08595 [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330873569|gb|EGH07718.1| hypothetical protein Pgy4_04537 [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330888791|gb|EGH21452.1| hypothetical protein PSYMO_08069 [Pseudomonas syringae pv. mori
str. 301020]
gi|330987664|gb|EGH85767.1| hypothetical protein PLA107_21753 [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|331011359|gb|EGH91415.1| hypothetical protein PSYTB_17135 [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 158
Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 15/163 (9%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPL 63
+KIA+F D NLY + + A G +Y L R ++ A+ Y GD +QQF +
Sbjct: 2 KKIAVFADVQNLYYTVRQAHGCHFNYAALWADISKRGEIVHAFAYAIDRGDSKQQQFQQI 61
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF V K + ++ K DV + +D + + ++ +V+ SGDG
Sbjct: 62 ------LRNLGFTVRLKPYIQRSDGS----AKGDWDVGITIDIMDFAPQVDEVVLASGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
F L L+R + K + + P + ++ L R A ++ +
Sbjct: 112 DFDML---LERVISKHGVEAVAYGVPGLTANSLIRAASRYVPI 151
>gi|89072963|ref|ZP_01159510.1| hypothetical protein SKA34_12125 [Photobacterium sp. SKA34]
gi|90578998|ref|ZP_01234808.1| hypothetical protein VAS14_04813 [Vibrio angustum S14]
gi|89051181|gb|EAR56637.1| hypothetical protein SKA34_12125 [Photobacterium sp. SKA34]
gi|90439831|gb|EAS65012.1| hypothetical protein VAS14_04813 [Vibrio angustum S14]
Length = 159
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 71/163 (43%), Gaps = 15/163 (9%)
Query: 6 EKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ-QFSPL 63
EK+A+F+D N+Y + K + DY +I AY Y GD +Q QF +
Sbjct: 2 EKVAIFVDVQNIYYTVKEKYRANFDYNAFWAEVSQDREIIAAYAYAIHKGDEKQRQFQNI 61
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF+V K + ++ K DV + +D E ++ + +++ SGDG
Sbjct: 62 ------LRAIGFEVKLKPFIQRSDGSA----KGDWDVGITLDVIEHAQDADRIILLSGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
F LV +Q K V V P + + L A ++ ++
Sbjct: 112 DFDLLVDKVQTKYNTKVEVYGV---PGLTATSLINTATHYREI 151
>gi|289627587|ref|ZP_06460541.1| hypothetical protein PsyrpaN_21062 [Pseudomonas syringae pv.
aesculi str. NCPPB3681]
gi|289649838|ref|ZP_06481181.1| hypothetical protein Psyrpa2_19118 [Pseudomonas syringae pv.
aesculi str. 2250]
gi|330870428|gb|EGH05137.1| hypothetical protein PSYAE_24882 [Pseudomonas syringae pv. aesculi
str. 0893_23]
Length = 158
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 15/163 (9%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPL 63
+KIA+F D NLY + + A G +Y L R ++ A+ Y GD +QQF +
Sbjct: 2 KKIAVFADVQNLYYTVRQAHGCHFNYAALWADISKRGEIVHAFAYAIDRGDSKQQQFQQI 61
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF V K + ++ K DV + +D + + ++ +V+ SGDG
Sbjct: 62 ------LRNLGFTVRLKPYIQRSDGSA----KGDWDVGITIDIMDFAPQVDEVVLASGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
F L L+R + K + + P + ++ L R A ++ +
Sbjct: 112 DFDML---LERVISKHDVEAVAYGVPGLTANSLIRAASRYVPI 151
>gi|291295060|ref|YP_003506458.1| hypothetical protein Mrub_0671 [Meiothermus ruber DSM 1279]
gi|290470019|gb|ADD27438.1| protein of unknown function DUF88 [Meiothermus ruber DSM 1279]
Length = 192
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 84/173 (48%), Gaps = 12/173 (6%)
Query: 2 FDPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ P++++ LF+D NLY S++ G ++++ L++ + ++RA Y V + E
Sbjct: 11 WSPQQRVGLFVDTQNLYHSARDYYGQNVNFESLMRYAVANRQLVRATAY---VVEREHDT 67
Query: 61 SPLHPLLDWLHYNGFQV--VAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVI 118
S P + L GF+V + KE T+ G+ + + D+ +A D L+ +V+
Sbjct: 68 SAW-PFIYKLSTIGFRVRRMNLTLKETTDE-GKPIYEGNWDMGIAADMVRLMHTLDVVVL 125
Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
SGDG F +V L + +V +++ S +L D F+ L ++N
Sbjct: 126 GSGDGDFVDIVEVLMERGIRVEVIAF----KETTSQKLIDAVDRFIHLPEIEN 174
>gi|119776250|ref|YP_928990.1| hypothetical protein Sama_3118 [Shewanella amazonensis SB2B]
gi|119768750|gb|ABM01321.1| conserved hypothetical protein [Shewanella amazonensis SB2B]
Length = 157
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 13/159 (8%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
+KIALF+D N+Y + + A +YRKL + S ++ A Y D Q
Sbjct: 2 KKIALFVDVQNIYYTCREAYQRQFNYRKLWQQLCSEGEIVSATAYAIHRSDDGQL----- 56
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
D L + GF++ K + ++ K DV + +D E + ++ +++ SGDG
Sbjct: 57 KFQDALRHIGFELKLKPFIQRSDGSA----KGDWDVGITIDVLETAPEVDTVILLSGDGD 112
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163
F L+ ++ +K + + V PS+ + L A F
Sbjct: 113 FALLLDKIR---QKYAVEAEVYGVPSLTAKSLMEAASRF 148
>gi|24374996|ref|NP_719039.1| hypothetical protein SO_3490 [Shewanella oneidensis MR-1]
gi|24349728|gb|AAN56483.1|AE015785_6 conserved hypothetical protein [Shewanella oneidensis MR-1]
Length = 157
Score = 47.4 bits (111), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 70/152 (46%), Gaps = 13/152 (8%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
KIALF+D N+Y + + A +YRKL + ++ ++ A Y GD Q
Sbjct: 2 NKIALFVDVQNIYYTCREAYQRQFNYRKLWQHLSTQGEIVSAVAYAIHRGDDGQL----- 56
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
D L + GF++ K + ++ K DV + +D + + ++ +++ SGDG
Sbjct: 57 KFQDALRHIGFELKLKPFIQRSDGSA----KGDWDVGITIDVLDAAPNVDTVILLSGDGD 112
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
F L L++ +K + + V P + + L
Sbjct: 113 FAIL---LEKITQKYGVKAEVYGVPQLTAKAL 141
>gi|15806586|ref|NP_295301.1| hypothetical protein DR_1578 [Deinococcus radiodurans R1]
gi|6459341|gb|AAF11139.1|AE002001_5 conserved hypothetical protein [Deinococcus radiodurans R1]
Length = 185
Score = 47.4 bits (111), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 68/141 (48%), Gaps = 6/141 (4%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
R ++ +FID NLY S++ L +++ +L+ ++ A YT + +
Sbjct: 7 RPRVGVFIDTQNLYHSARDLLERTVNFETILQVATEGRELVHAISYTV----EREGEATS 62
Query: 64 HPLLDWLHYNGFQVV-AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
P + L GF+V + + G+ + + D+ + D F + L+ +V+ SGD
Sbjct: 63 RPFIYKLSTLGFKVRRMNLTLHHVTDGGKPIYEGNWDMGIVADMFRLMDHLDVIVLGSGD 122
Query: 123 GCFTTLVAALQRKVKKVTIVS 143
G FT +V LQ + K+V +++
Sbjct: 123 GDFTDIVEVLQERGKRVEVIA 143
>gi|170725723|ref|YP_001759749.1| hypothetical protein Swoo_1362 [Shewanella woodyi ATCC 51908]
gi|169811070|gb|ACA85654.1| protein of unknown function DUF88 [Shewanella woodyi ATCC 51908]
Length = 157
Score = 47.4 bits (111), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 67/152 (44%), Gaps = 13/152 (8%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
+KIALF+D N+Y + + A G +YRKL + ++ A Y GD Q
Sbjct: 2 KKIALFVDVQNIYYTCRQAHGRQFNYRKLWQHISHEGEIVSATAYAIHKGDDGQL----- 56
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
D L + GF V K F + K DV + +D E + ++ +++ SGDG
Sbjct: 57 KFQDALKHIGFDV---KLKPFIQRA-DGSAKGDWDVGITIDIMEAASEVDSIILLSGDGD 112
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
F L+ + +K I + V P + + L
Sbjct: 113 FDLLMLKI---YQKYGIETQVYGVPGLTAKSL 141
>gi|260778792|ref|ZP_05887684.1| hypothetical protein VIC_004198 [Vibrio coralliilyticus ATCC
BAA-450]
gi|260604956|gb|EEX31251.1| hypothetical protein VIC_004198 [Vibrio coralliilyticus ATCC
BAA-450]
Length = 160
Score = 47.4 bits (111), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 13/160 (8%)
Query: 6 EKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
EK+A+F+D N+Y +++ + DY + V A+ Y DP+Q+ H
Sbjct: 2 EKVAIFVDVQNIYYTTREKYRANFDYNEFWYVATEGRDVTEAHAYAIASHDPKQR--QFH 59
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
+L + GF V K + + K DV +A+D +E + ++ +++ SGDG
Sbjct: 60 HILRGI---GFNVKLKPFIQRQDGSA----KGDWDVGIALDVYEAASKVDRVILLSGDGD 112
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F LV +Q + V V P +++ L D F+
Sbjct: 113 FDVLVKRVQERFGTKVDVFGV---PGLSAQSLIDVCDKFI 149
>gi|239996208|ref|ZP_04716732.1| hypothetical protein AmacA2_17270 [Alteromonas macleodii ATCC
27126]
Length = 153
Score = 47.4 bits (111), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
K + +D N+Y + + A + +Y + + + A+ Y GD +Q+
Sbjct: 2 NKALVLVDVQNVYYTCRQAYKRNFNYNQFWRELTYNLDIAHAFAYAIDRGDSKQR----- 56
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
+ L GF+V K + + K DV + VDA E ++ ++ +++ SGDG
Sbjct: 57 EFQNILRAIGFEVKLKPFIQRADGSA----KGDWDVGITVDALEHADDVDEIILVSGDGD 112
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F LV AL+ K K VT+ P++ ++ +++ A ++
Sbjct: 113 FDILVNALKAKGKTVTVYGV----PALTAESIQKVASKYV 148
>gi|28871798|ref|NP_794417.1| hypothetical protein PSPTO_4666 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|28855050|gb|AAO58112.1| conserved protein of unknown function [Pseudomonas syringae pv.
tomato str. DC3000]
Length = 158
Score = 47.4 bits (111), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 15/163 (9%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPL 63
+KIA+F D NLY + + A G +Y L R ++ A+ Y GD +QQF +
Sbjct: 2 KKIAVFADVQNLYYTVRQAYGCHFNYAALWADISKRGEIVHAFAYAIDRGDSKQQQFQQI 61
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF V K + ++ K DV + +D + + ++ +V+ SGDG
Sbjct: 62 ------LRNLGFTVRLKPYIQRSDGS----AKGEWDVGITIDIMDFAPQVDEVVLASGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
F L L R + K + + P + ++ L R A ++ +
Sbjct: 112 DFDML---LDRVISKHGVEAVAYGVPGLTANSLIRAASRYVPI 151
>gi|119476672|ref|ZP_01616982.1| hypothetical protein GP2143_03548 [marine gamma proteobacterium
HTCC2143]
gi|119449928|gb|EAW31164.1| hypothetical protein GP2143_03548 [marine gamma proteobacterium
HTCC2143]
Length = 158
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 65/130 (50%), Gaps = 12/130 (9%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKL-LKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
EK+A+F+D N+Y +++ + DY K LKA SR V++A Y T GD +Q
Sbjct: 2 EKVAIFVDVQNVYYTTRQTFRKNFDYNKFWLKACSSRE-VVKAIAYATDRGDQKQ----- 55
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
H + L GF+V K + ++ K DV + +D E ++ + +++ SGDG
Sbjct: 56 HEFQNILRAIGFEVKLKPFIQRSDGSA----KGDWDVGITIDIMECADDVAVVILVSGDG 111
Query: 124 CFTTLVAALQ 133
F L ++
Sbjct: 112 DFDLLAQKIR 121
>gi|213966787|ref|ZP_03394938.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
gi|301383296|ref|ZP_07231714.1| hypothetical protein PsyrptM_11692 [Pseudomonas syringae pv. tomato
Max13]
gi|302062465|ref|ZP_07254006.1| hypothetical protein PsyrptK_20968 [Pseudomonas syringae pv. tomato
K40]
gi|302133447|ref|ZP_07259437.1| hypothetical protein PsyrptN_18744 [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|213928637|gb|EEB62181.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
gi|330873520|gb|EGH07669.1| hypothetical protein PSYMP_03990 [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
gi|330967689|gb|EGH67949.1| hypothetical protein PSYAC_24213 [Pseudomonas syringae pv.
actinidiae str. M302091]
gi|331018942|gb|EGH98998.1| hypothetical protein PLA106_23133 [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 158
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 15/163 (9%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPL 63
+KIA+F D NLY + + A G +Y L R ++ A+ Y GD +QQF +
Sbjct: 2 KKIAVFADVQNLYYTVRQAYGCHFNYAALWADISKRGEIVHAFAYAIDRGDSKQQQFQQI 61
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF V K + ++ K DV + +D + + ++ +V+ SGDG
Sbjct: 62 ------LRNLGFTVRLKPYIQRSDGS----AKGDWDVGITIDIMDFAPQVDEVVLASGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
F L L R + K + + P + ++ L R A ++ +
Sbjct: 112 DFDML---LDRVISKHGVEAVAYGVPGLTANSLIRAASRYVPI 151
>gi|294139934|ref|YP_003555912.1| hypothetical protein SVI_1163 [Shewanella violacea DSS12]
gi|293326403|dbj|BAJ01134.1| conserved hypothetical protein [Shewanella violacea DSS12]
Length = 159
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 10/133 (7%)
Query: 4 PREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
+KIA+F+D N+Y + + A G +YRKL + ++ A Y GD Q
Sbjct: 2 TNKKIAIFVDVQNIYYTCRQAYGRQFNYRKLWQHIIHEGDIVSATAYAIHKGDDGQL--- 58
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
D L + GF + K + ++ K DV +A+D E + ++ +++ SGD
Sbjct: 59 --KFQDALKHIGFDIKLKPFIQRSDGSA----KGDWDVGIAIDVMEAATEVDTIILLSGD 112
Query: 123 GCFTTLVAALQRK 135
G F L+ + +K
Sbjct: 113 GDFDLLMLKVYQK 125
>gi|148977299|ref|ZP_01813913.1| hypothetical protein VSWAT3_11922 [Vibrionales bacterium SWAT-3]
gi|145963412|gb|EDK28676.1| hypothetical protein VSWAT3_11922 [Vibrionales bacterium SWAT-3]
Length = 157
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 15/161 (9%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
E IA+ +D N+Y +++ + DY + V+ A+ Y DP+Q+ H
Sbjct: 2 ENIAILVDVQNVYYTTRDKYRSNFDYNQFWYVATEGRNVVAAHAYAISSQDPKQR--QFH 59
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
+L + GF V K + + K DV +A+DA E +E ++ +V+ SGDG
Sbjct: 60 HILRGV---GFDVKLKPFIQRRDGSA----KGDWDVGIALDAIELAENVDTIVLVSGDGD 112
Query: 125 FTTLVAAL-QRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F LV + QR KKV + P + + L A F+
Sbjct: 113 FEILVERIKQRFGKKVEVYGV----PGLTAQNLIDSASKFV 149
>gi|157374400|ref|YP_001473000.1| hypothetical protein Ssed_1261 [Shewanella sediminis HAW-EB3]
gi|157316774|gb|ABV35872.1| protein of unknown function DUF88 [Shewanella sediminis HAW-EB3]
Length = 159
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
+KIA+F+D N+Y + + A G +YRKL + + A Y GD Q
Sbjct: 4 KKIAIFVDVQNIYYTCRQAYGRQFNYRKLWQHINHEGEISSATAYAIHRGDDGQL----- 58
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
D L + GF V K + ++ K DV + +D E + ++ +++ SGDG
Sbjct: 59 KFQDALKHIGFDVKLKPFIQRSDG----SAKGDWDVGITIDIMEAASEVDSIILLSGDGD 114
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
F L+ + + K I + V P++ + L
Sbjct: 115 FGLLMLKIHQ---KYGIDTQVYGVPTLTAKSL 143
>gi|297622586|ref|YP_003704020.1| hypothetical protein Trad_0338 [Truepera radiovictrix DSM 17093]
gi|297163766|gb|ADI13477.1| protein of unknown function DUF88 [Truepera radiovictrix DSM 17093]
Length = 198
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 82/167 (49%), Gaps = 12/167 (7%)
Query: 4 PREKIALFIDGANLYASSKAL-GFDIDYRKLLK-AFRSRAIVIRAYYYTTVVGDPEQQFS 61
P +++ LF+D NLY +++ + +DY +LK + RSR +V Y G+ +
Sbjct: 34 PEQRVGLFVDTQNLYYAARDIYSRHVDYAVMLKLSERSRHLVHATAYVVEREGE-----A 88
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
+ + L G++V + + ++ GR ++ D+ +A D + L+ +V+ S
Sbjct: 89 TAYGFVTKLSALGYRVRRRKVRVHRADSGGRPVLEGDWDMGIAADIVRAWDYLDVIVLAS 148
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
GDG F ++ Q++ K+V VL+ AS L AD FM LA
Sbjct: 149 GDGDFAPMLELAQQRGKRV----EVLAFREAASQNLLDLADAFMGLA 191
>gi|54308491|ref|YP_129511.1| hypothetical protein PBPRA1298 [Photobacterium profundum SS9]
gi|46912920|emb|CAG19709.1| conserved hypothetical protein [Photobacterium profundum SS9]
Length = 159
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 71/163 (43%), Gaps = 15/163 (9%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ-QFSPL 63
EK+A+F+D N+Y + K + DY V+ AY Y GD +Q QF +
Sbjct: 2 EKVAIFVDVQNIYYTVKDKYKCNFDYNAFWAEATQGREVVAAYAYAIHRGDEKQGQFQNI 61
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF+V K + ++ K DV + +D E + ++ +++ SGDG
Sbjct: 62 ------LRGIGFEVKLKPFIQRSDGS----AKGDWDVGITLDVIEHAADVDRVILLSGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
F LV +Q K + V P + + L A Y+ ++
Sbjct: 112 DFDLLVDKVQ---TKYGVDVEVYGVPGLTATSLINTAHYYREI 151
>gi|90414813|ref|ZP_01222781.1| hypothetical protein P3TCK_17379 [Photobacterium profundum 3TCK]
gi|90324118|gb|EAS40703.1| hypothetical protein P3TCK_17379 [Photobacterium profundum 3TCK]
Length = 159
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 71/163 (43%), Gaps = 15/163 (9%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ-QFSPL 63
EK+A+F+D N+Y + K + DY V+ AY Y GD +Q QF +
Sbjct: 2 EKVAIFVDVQNIYYTVKDKYKCNFDYNAFWAEATQGREVVAAYAYAIHRGDEKQGQFQNI 61
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF+V K + ++ K DV + +D E + ++ +++ SGDG
Sbjct: 62 ------LRGIGFEVKLKPFIQRSDGS----AKGDWDVGITLDVIEHAGDVDRVILLSGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
F LV +Q K + V P + + L A Y+ ++
Sbjct: 112 DFDLLVDKVQ---TKYGVDVEVYGVPGLTATSLINTAHYYREI 151
>gi|88796999|ref|ZP_01112589.1| hypothetical protein MED297_19237 [Reinekea sp. MED297]
gi|88779868|gb|EAR11053.1| hypothetical protein MED297_19237 [Reinekea sp. MED297]
Length = 159
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 15/159 (9%)
Query: 8 IALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ-QFSPLHP 65
+A+ +D N+Y +++ A + DY + + ++ A Y GD +Q QF +
Sbjct: 4 VAILVDVQNVYYTTRHAFRRNFDYNRFWAQVSEQGTIVLANAYAVDRGDEKQKQFQNI-- 61
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
L GF V K + + K DV + +DA + ++ + +V+ +GDG F
Sbjct: 62 ----LRAIGFNVKLKPFIQRADGSA----KGDWDVGITIDALDAAQLADTVVLVTGDGDF 113
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
T LV L+ + + V V PS+ + L AD F+
Sbjct: 114 TILVDKLRNDLDRRVEVYGV---PSLTAKSLMDAADAFI 149
>gi|212634169|ref|YP_002310694.1| hypothetical protein swp_1319 [Shewanella piezotolerans WP3]
gi|212555653|gb|ACJ28107.1| Conserved hypothetical protein [Shewanella piezotolerans WP3]
Length = 157
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 13/162 (8%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
+KIALF+D N+Y + + A G +YRKL + + A Y GD Q
Sbjct: 2 KKIALFVDVQNIYYTCRQAYGRQFNYRKLWQHLGYEGEITSATAYAIHRGDDGQL----- 56
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
D L + GF V K + ++ K DV + +D E + ++ +++ SGDG
Sbjct: 57 KFQDALKHIGFDVKLKPFIQRSDG----SAKGDWDVGITIDIMEAASEVDCVILLSGDGD 112
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
F L+ + +K T V V P + + L A + ++
Sbjct: 113 FDLLMLKIYQKYGVETQVYGV---PGLTAKSLIDSASQYHEI 151
>gi|294495612|ref|YP_003542105.1| hypothetical protein Mmah_0940 [Methanohalophilus mahii DSM 5219]
gi|292666611|gb|ADE36460.1| protein of unknown function DUF88 [Methanohalophilus mahii DSM
5219]
Length = 161
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 64/129 (49%), Gaps = 10/129 (7%)
Query: 6 EKIALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
+K+A+F+D N++ S++ + + +DY KLL+A + RA Y D +Q
Sbjct: 5 QKLAVFVDVQNMFYSARNIHYGRLDYEKLLRAVVMERKLTRAIAYLVETPDIDQS----- 59
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
++ G++V +K K + K D+ +A+DA + ++ +V+ SGDG
Sbjct: 60 GFKSFIGSIGWEVKSKALKVRPDGS----TKGDWDMGIAIDAISIAPKVDTIVLVSGDGD 115
Query: 125 FTTLVAALQ 133
F L+ L+
Sbjct: 116 FVDLINHLK 124
>gi|269925423|ref|YP_003322046.1| protein of unknown function DUF88 [Thermobaculum terrenum ATCC
BAA-798]
gi|269789083|gb|ACZ41224.1| protein of unknown function DUF88 [Thermobaculum terrenum ATCC
BAA-798]
Length = 408
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 81/183 (44%), Gaps = 26/183 (14%)
Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRS---RAIVIRAYYYTTVVGDPEQQFSPLH 64
+AL+ID N+ S + LK S R +V RAY + + Q P
Sbjct: 20 VALYIDWENIKYSLWNKDSRVPNATALKEAASKFGRVVVARAY---ANWQEHQHQLDP-- 74
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRK---RVKSSMDVELAVDAFE---QSEGLEHLVI 118
+ L+ G + + + +T K R K+S+DV+L VDA + + + V+
Sbjct: 75 ---NDLYSAGIEPIYVPTRTYTSTDAVKTNNRRKNSVDVKLTVDAVDFCLSNPNIHTFVL 131
Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
+GDG F LV AL+ + ++V ++ S S QL ADYF+ +I DP
Sbjct: 132 VTGDGDFIHLVNALRSRGREVVVIGCSWS----TSWQLTSMADYFIPY-----DIEVDPI 182
Query: 179 EDK 181
DK
Sbjct: 183 YDK 185
>gi|86146656|ref|ZP_01064977.1| hypothetical protein MED222_07105 [Vibrio sp. MED222]
gi|218676438|ref|YP_002395257.1| hypothetical protein VS_II0673 [Vibrio splendidus LGP32]
gi|85835503|gb|EAQ53640.1| hypothetical protein MED222_07105 [Vibrio sp. MED222]
gi|218324706|emb|CAV26328.1| Conserved hypothetical protein [Vibrio splendidus LGP32]
Length = 157
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 13/162 (8%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
E IA+ +D N+Y +++ + DY + V+ A Y DP+Q+ H
Sbjct: 2 ENIAILVDVQNVYYTTRDKYRSNFDYNQFWYVATEGRNVVEANAYAISSQDPKQR--QFH 59
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
+L + GF V K + + K DV +A+DA E +E ++ +V+ SGDG
Sbjct: 60 HILRGV---GFNVKLKPFIQRRDGSA----KGDWDVGIALDAIELAETVDTIVLVSGDGD 112
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
F LV ++ + K V V P + + L A F+ +
Sbjct: 113 FEILVERIKERFGKPVEVYGV---PGLTAQNLIDSASKFVPI 151
>gi|87121768|ref|ZP_01077655.1| hypothetical protein MED121_19509 [Marinomonas sp. MED121]
gi|86163019|gb|EAQ64297.1| hypothetical protein MED121_19509 [Marinomonas sp. MED121]
Length = 163
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 12/137 (8%)
Query: 1 MFDPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ- 58
+ D KIA+F+D N+Y +S+ +Y+K ++ +++AY Y GD +Q
Sbjct: 3 VIDSAPKIAIFVDVQNIYYTSRHTFARHFNYQKFWDEIAAQGEIVQAYAYAIDKGDSKQA 62
Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVI 118
QF + L GF+V K + + K DV + +D + ++ +V+
Sbjct: 63 QFQQI------LRGIGFEVKLKPFIQRRDGSA----KGDWDVGITIDVLAAAPDVDIIVL 112
Query: 119 FSGDGCFTTLVAALQRK 135
SGDG F L+ A + K
Sbjct: 113 ASGDGDFALLLDAARTK 129
>gi|108802863|ref|YP_642800.1| hypothetical protein Rxyl_0007 [Rubrobacter xylanophilus DSM 9941]
gi|108764106|gb|ABG02988.1| protein of unknown function DUF88 [Rubrobacter xylanophilus DSM
9941]
Length = 487
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 14/168 (8%)
Query: 6 EKIALFIDGANLYASS-KALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
E +A+FID N+Y S+ G + +L+ R ++ A Y + +F
Sbjct: 102 EDLAIFIDWENIYISTVSEYGAKPNVSAILEKAREYGRIVSATAYADWT---DGEFRDAP 158
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELA---VDAFEQSEGLEHLVIFSG 121
P L+ NG A+ F +KR +S+DV LA VD ++ V+ +G
Sbjct: 159 PT---LYSNGISPRYISARYFPGGKSQKRRTNSIDVMLAVECVDFLHNHPQVDTYVLVTG 215
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
DG F LV L+ + K V ++ S L AD+F+ A L
Sbjct: 216 DGDFIPLVNLLRSRGKVVVVIGVS----EATSYHLIESADHFISYASL 259
>gi|196234013|ref|ZP_03132849.1| protein of unknown function DUF88 [Chthoniobacter flavus Ellin428]
gi|196221952|gb|EDY16486.1| protein of unknown function DUF88 [Chthoniobacter flavus Ellin428]
Length = 180
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 76/171 (44%), Gaps = 13/171 (7%)
Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAF-RSRAIVIRAYYYTTVVGDPEQQFS- 61
P+ ++ + +D +N+ +++K +D+ KL R ++ Y PE Q
Sbjct: 10 PQRRVLILVDESNVTSAAKVTNRKLDWLKLRDHLVNGRELLEMVVYVGLPPAMPEWQAER 69
Query: 62 -PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEH--LVI 118
+ + WL NGF VV+K E+ K+++DV +A+D E S ++ +++
Sbjct: 70 DKKNKFVFWLRSNGFLVVSKDGSPADES----HYKANVDVLMAIDGVELSTEMQPDVVIL 125
Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
+GD F L L+R+ +V S L+ A+ +DL L
Sbjct: 126 VTGDADFAELALRLRRRGIRVEAASVA----HTLGAGLKTSANGIIDLGPL 172
>gi|84393278|ref|ZP_00992039.1| hypothetical protein V12B01_14530 [Vibrio splendidus 12B01]
gi|84376103|gb|EAP92990.1| hypothetical protein V12B01_14530 [Vibrio splendidus 12B01]
Length = 157
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 13/162 (8%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
E IA+ +D N+Y +++ + DY + V+ A Y DP+Q+ H
Sbjct: 2 ENIAILVDVQNVYYTTRDKYRSNFDYNQFWYVATEGRNVVAANAYAISSQDPKQR--QFH 59
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
+L + GF V K + + K DV +A+DA E +E ++ +V+ SGDG
Sbjct: 60 HILRGV---GFNVKLKPFIQRRDGSA----KGDWDVGIALDAIELAETVDTIVLVSGDGD 112
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
F LV ++ + K V V P + + L A F+ +
Sbjct: 113 FEILVERIKERFGKPVEVYGV---PGLTAQNLIDSASKFVPI 151
>gi|91201953|emb|CAJ75013.1| conserved hypothetical protein [Candidatus Kuenenia
stuttgartiensis]
Length = 177
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 10/139 (7%)
Query: 6 EKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
++I +F+D N++ S+KAL IDY KLL ++RA Y D +Q
Sbjct: 11 QRIGVFVDVQNMFYSAKALHQSKIDYSKLLLEIVGGRNLVRAIAYIVQKPDVDQS----- 65
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
D L G+++ K + + K D+ +A+D + L+ +V+ +GDG
Sbjct: 66 SFTDALCRLGYEIKTKDLRLRPDGTA----KGDWDMGIAIDTISIASKLDTVVLVTGDGD 121
Query: 125 FTTLVAALQRKVKKVTIVS 143
F LV L+ +V VS
Sbjct: 122 FVPLVELLKYHGCRVETVS 140
>gi|152994925|ref|YP_001339760.1| hypothetical protein Mmwyl1_0893 [Marinomonas sp. MWYL1]
gi|150835849|gb|ABR69825.1| protein of unknown function DUF88 [Marinomonas sp. MWYL1]
Length = 158
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 69/163 (42%), Gaps = 15/163 (9%)
Query: 7 KIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ-QFSPLH 64
+ + +D N+Y +++ A G DY + V++A Y GD +Q QF +
Sbjct: 3 NVTILVDVQNVYYTTRQAFGRSFDYNTFWQQATEGRNVVKAIAYAIDRGDEKQRQFQNI- 61
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
L GF+V K + ++ K DV +A+D E + + LV+ SGDG
Sbjct: 62 -----LRAIGFEVKLKPFIQRSDGS----AKGDWDVGIAIDGIEHGKDSDVLVLLSGDGD 112
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
F L L+ K + V V S+ + L AD F +
Sbjct: 113 FDILAKTLREKYQTRVEVYGV---ESLTAQSLINAADSFTAIG 152
>gi|26991450|ref|NP_746875.1| hypothetical protein PP_4769 [Pseudomonas putida KT2440]
gi|148549846|ref|YP_001269948.1| hypothetical protein Pput_4644 [Pseudomonas putida F1]
gi|24986525|gb|AAN70339.1|AE016675_9 conserved hypothetical protein [Pseudomonas putida KT2440]
gi|148513904|gb|ABQ80764.1| protein of unknown function DUF88 [Pseudomonas putida F1]
Length = 159
Score = 43.9 bits (102), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 72/161 (44%), Gaps = 15/161 (9%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPL 63
+KIALF D NLY + + A G +Y L ++ A Y GD +QQF +
Sbjct: 2 KKIALFADVQNLYYTVRQAHGCHFNYTALWADVSREGQIVEAVAYAIDRGDSKQQQFQQI 61
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF+V K + ++ K DV + +D + + ++ +V+ SGDG
Sbjct: 62 ------LRNLGFEVRLKPFIQRSDGSA----KGDWDVGITLDVIDAASRVDQVVLASGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F L L+R +++ + V P + + L R A ++
Sbjct: 112 DFDLL---LERVIQRHGTEAVVYGVPGLTALSLIRAATRYV 149
>gi|170719838|ref|YP_001747526.1| hypothetical protein PputW619_0652 [Pseudomonas putida W619]
gi|169757841|gb|ACA71157.1| protein of unknown function DUF88 [Pseudomonas putida W619]
Length = 159
Score = 43.9 bits (102), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 71/161 (44%), Gaps = 15/161 (9%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPL 63
+KIALF D NLY + + A G +Y L ++ A Y GD +QQF +
Sbjct: 2 KKIALFADVQNLYYTVRQAHGCHFNYTALWSEVSREGEIVEAVAYAIDRGDSKQQQFQQI 61
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF V K + ++ K DV + +D + + ++ +V+ SGDG
Sbjct: 62 ------LRNLGFDVRLKPFIQRSDGSA----KGDWDVGITLDVIDAASRVDQVVLASGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F L L+R +++ + V P + + L R A ++
Sbjct: 112 DFDLL---LERVIQRHGAEAVVYGVPGLTAMSLIRAASRYV 149
>gi|297566075|ref|YP_003685047.1| hypothetical protein Mesil_1654 [Meiothermus silvanus DSM 9946]
gi|296850524|gb|ADH63539.1| protein of unknown function DUF88 [Meiothermus silvanus DSM 9946]
Length = 195
Score = 43.5 bits (101), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 10/146 (6%)
Query: 2 FDPREKIALFIDGANLYASSK-ALGFDIDYRKLLK-AFRSRAIVIRAYYYTTVVGDPEQQ 59
+ P +++ LF+D NLY S++ ++++ LLK A R +V Y GD
Sbjct: 14 YSPMQRVGLFVDTQNLYHSARDYYEKNVNFESLLKHAVSGRQLVRATAYVVEREGD---- 69
Query: 60 FSPLHPLLDWLHYNGFQV--VAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLV 117
+ P + L G++V + KE T+ G+ + + D+ +A D L+ +V
Sbjct: 70 -TSAWPFIYKLSTIGYRVRRMNLTLKETTDE-GKPIYEGNWDMGIAADMVRLMHTLDVVV 127
Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVS 143
+ SGDG F ++ L + +V +V+
Sbjct: 128 LGSGDGDFVDIIEVLMERGIRVEVVA 153
>gi|226356465|ref|YP_002786205.1| hypothetical protein Deide_14960 [Deinococcus deserti VCD115]
gi|226318455|gb|ACO46451.1| conserved hypothetical protein [Deinococcus deserti VCD115]
Length = 193
Score = 43.5 bits (101), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 77/171 (45%), Gaps = 10/171 (5%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
R ++ LF+D NLY S++ L +++ +L ++ A YT + +
Sbjct: 7 RPRVGLFVDTQNLYHSARDLLERTVNFETILNVATEGRELVHAISYTV----EREGEATA 62
Query: 64 HPLLDWLHYNGFQVV-AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
P + L G++V + + G+ + + D+ + D + L+ +V+ SGD
Sbjct: 63 RPFIYKLSALGYKVRRMNLTLHHVTDGGKAIYEGNWDMGIVADMVRLMDHLDIVVLGSGD 122
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
G +T +V LQ + K+V +++ + +L AD FM L L+ +
Sbjct: 123 GDYTEIVEVLQERGKRVEVIAF----REHTAQKLIDAADRFMHLPDLEGAL 169
>gi|85859964|ref|YP_462166.1| putative cytoplasmic protein [Syntrophus aciditrophicus SB]
gi|85723055|gb|ABC77998.1| hypothetical cytosolic protein [Syntrophus aciditrophicus SB]
Length = 196
Score = 43.5 bits (101), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 28/183 (15%)
Query: 10 LFIDGANLYASSKALGFDIDYRKLLK--------------AFRSRAIVIRAYYYTTVVGD 55
+F+DG NL KA D K + + VIR YYYT V GD
Sbjct: 19 VFVDGENLAIRYKAGLADAPPEKHVDFLQDVYVWSHFANIPYHVHCDVIRKYYYTAVQGD 78
Query: 56 PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGR--KRVKSSMDVELAVDAFEQSEGL 113
P ++ + + + + F + GR KRV ++ E+ A + +
Sbjct: 79 --------DPKIEDVETQLKNIGIEAPRVFKKKKGRPTKRVDITIATEMLTHAHRGNYDI 130
Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
LV +GD + LV A+Q + ++V ++ DP + S +L ADYF D++Y E
Sbjct: 131 AILV--AGDEDYVPLVKAVQDEGRRV-VLWFFEGDPGL-SKKLEMAADYFFDISYFLCEP 186
Query: 174 ARD 176
A +
Sbjct: 187 AEN 189
>gi|254236844|ref|ZP_04930167.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|126168775|gb|EAZ54286.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
Length = 164
Score = 43.5 bits (101), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 62/140 (44%), Gaps = 14/140 (10%)
Query: 28 IDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPLHPLLDWLHYNGFQVVAKVAKEFT 86
++Y L ++ AY Y GDP +QQF + L GF V K +
Sbjct: 30 LNYAALWADIARGGSIVEAYAYAIDRGDPRQQQFQQI------LRNLGFTVKLKPYIQRA 83
Query: 87 ENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVL 146
+ K DV + +D + + ++ +V+ SGDG F L L++ ++ +V+T
Sbjct: 84 DGS----AKGDWDVGITIDVLDAAPRVDEVVLLSGDGDFDLL---LEKVIRAHGVVATAY 136
Query: 147 SDPSMASDQLRRQADYFMDL 166
P + ++ L R A ++ +
Sbjct: 137 GVPGLTANALIRAASRYVPI 156
>gi|303325412|ref|ZP_07355855.1| conserved hypothetical protein [Desulfovibrio sp. 3_1_syn3]
gi|302863328|gb|EFL86259.1| conserved hypothetical protein [Desulfovibrio sp. 3_1_syn3]
Length = 228
Score = 43.5 bits (101), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 92 KRVKSSMDVELAVDAFE---QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSD 148
R K+S D+ L +D + S + +I SGD FT L+ LQ ++ ++S S
Sbjct: 112 SRGKTSTDIHLVMDCMDDLSHSTHFDEFIILSGDADFTPLLIRLQEHARRTLVLSVGYSS 171
Query: 149 PS-MASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182
P+ A+ R + D+F+ A LK++ R DED +
Sbjct: 172 PAYTAAASWRIREDWFLQQA-LKDD--RSDDEDTE 203
>gi|312881670|ref|ZP_07741448.1| hypothetical protein VIBC2010_10472 [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309370733|gb|EFP98207.1| hypothetical protein VIBC2010_10472 [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 158
Score = 43.5 bits (101), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 74/162 (45%), Gaps = 19/162 (11%)
Query: 6 EKIALFIDGANLYASSKA---LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
EKIA+F+D N+Y +++ FD ++ + A +V AY + ++
Sbjct: 2 EKIAIFVDVQNIYYTTREKYRAHFDYNHFWHVVATEKEVVVANAY----AIASKHEKQRQ 57
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
H +L + GF+V K + + K D+ +A+D ++ S+ ++ +++ SGD
Sbjct: 58 FHHILRGI---GFEVKLKPFLQRKDGTA----KGDWDIGIALDIYDISKEVDRVILLSGD 110
Query: 123 GCFTTLVAALQRKVKKVTIVS-TVLSDPSMASDQLRRQADYF 163
G F LV +VKK + V PS+ S L D F
Sbjct: 111 GDFEVLV----DRVKKTSNAKFDVFGVPSLTSQSLIDVCDNF 148
>gi|237808056|ref|YP_002892496.1| hypothetical protein Tola_1293 [Tolumonas auensis DSM 9187]
gi|237500317|gb|ACQ92910.1| protein of unknown function DUF88 [Tolumonas auensis DSM 9187]
Length = 162
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 12/131 (9%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ-QFSPL 63
E++ + +D N+Y ++K A + DY K + V++A Y GD +Q QF +
Sbjct: 2 ERVVVLVDVQNIYYTTKQAYNCNFDYNAFWKKVTANRQVVKAIAYAIDRGDEKQRQFQNI 61
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF+V K + + K + D+ + +DA E ++ + +V+ SGDG
Sbjct: 62 ------LRAIGFEVKLKPLIQRVDGTA----KGNWDIGITLDAMEYAKESDIVVLASGDG 111
Query: 124 CFTTLVAALQR 134
F L+ + +
Sbjct: 112 DFDLLINKIHK 122
>gi|156744317|ref|YP_001434446.1| hypothetical protein Rcas_4412 [Roseiflexus castenholzii DSM 13941]
gi|156235645|gb|ABU60428.1| protein of unknown function DUF88 [Roseiflexus castenholzii DSM
13941]
Length = 787
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 78/179 (43%), Gaps = 40/179 (22%)
Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLK--AFRSRAIVIRAYYYTTVVGDPEQQ 59
+PR +A+FID N+Y S + L + ++ ++ A R ++ RAY
Sbjct: 5 NPRLDVAVFIDFENVYVSVRDKLDVNPNFEIIMDRVADLGRVVIARAY------------ 52
Query: 60 FSPLHPLLDWLHY---------NGFQVVAKVAKEFTENCGR--KRVKSSMDVELAVDAFE 108
DW Y NG + + + + GR + +K+S+D+ L +DA +
Sbjct: 53 -------ADWYRYPRVTSALYANGIEPMYVPTYYYDRDLGRTGRAIKNSVDMNLCIDAMK 105
Query: 109 ---QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
+ + V+ +GD F LV A+++ K+V I+ AS L + AD F+
Sbjct: 106 TLYTNPNIGKFVLATGDRDFIPLVNAIRQHGKEVIIIGVG----GAASGHLAQSADEFI 160
>gi|307824132|ref|ZP_07654359.1| protein of unknown function DUF88 [Methylobacter tundripaludum
SV96]
gi|307734916|gb|EFO05766.1| protein of unknown function DUF88 [Methylobacter tundripaludum
SV96]
Length = 157
Score = 43.1 bits (100), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 25/166 (15%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLK--AFRSRAI----VIRAYYYTTVVGDPEQQ 59
EK+A+F+D N+Y ++K YR+ AF S+A VI A+ Y GD +QQ
Sbjct: 2 EKVAIFVDVQNIYYTTKQ-----SYRRHFNYTAFWSQATADREVIAAFAYAIDKGDCKQQ 56
Query: 60 -FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVI 118
F + L GF+V K + ++ K DV + +DA + + ++ +++
Sbjct: 57 GFQQV------LRNIGFEVKLKPYIQRSDGSA----KGDWDVGITLDAIDYAAKVDVIIL 106
Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
SGDG F L+ R + VT + V P++ + L A F+
Sbjct: 107 LSGDGDFDLLLDK-ARNIYGVT--TEVYGVPALTAPSLINSAGRFI 149
>gi|167035773|ref|YP_001671004.1| hypothetical protein PputGB1_4782 [Pseudomonas putida GB-1]
gi|166862261|gb|ABZ00669.1| protein of unknown function DUF88 [Pseudomonas putida GB-1]
Length = 159
Score = 43.1 bits (100), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 71/161 (44%), Gaps = 15/161 (9%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPL 63
+KIALF D NLY + + A G +Y L ++ A Y GD +QQF +
Sbjct: 2 KKIALFADVQNLYYTVRQAHGCHFNYTALWADVSREGQIVEAVAYAIDRGDAKQQQFQQI 61
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF V K + ++ K DV + +D + + ++ +V+ SGDG
Sbjct: 62 ------LRNLGFDVRLKPFIQRSDGSA----KGDWDVGITLDVIDAASRVDQVVLASGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F L L+R +++ + V P + + L R A ++
Sbjct: 112 DFDLL---LERVIQRHGTEAVVYGVPGLTALSLIRAATRYV 149
>gi|158336589|ref|YP_001517763.1| hypothetical protein AM1_3453 [Acaryochloris marina MBIC11017]
gi|158306830|gb|ABW28447.1| conserved domain protein [Acaryochloris marina MBIC11017]
Length = 459
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 95 KSSMDVELAVDAFE---QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151
++++DV+L VD Q + H +I +GD F LV AL+ K+VT++ +
Sbjct: 164 ENAVDVKLTVDCLNTAYQYPDVGHFIIVTGDRDFVPLVNALKTLEKQVTLIGRA----EV 219
Query: 152 ASDQLRRQADYFMDLAYLKNE 172
AS+QL AD F+DL L E
Sbjct: 220 ASNQLLLSADEFIDLEKLDTE 240
>gi|313500724|gb|ADR62090.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
Length = 159
Score = 42.7 bits (99), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 71/161 (44%), Gaps = 15/161 (9%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPL 63
+KIALF D NLY + + A G +Y L ++ A Y GD +QQF +
Sbjct: 2 KKIALFADVQNLYYTVRQAHGCHFNYTALWADVSREGQIVEAVAYAIDRGDSKQQQFQQI 61
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF V K + ++ K DV + +D + + ++ +V+ SGDG
Sbjct: 62 ------LRNLGFDVRLKPFIQRSDGSA----KGDWDVGITLDVIDAASRVDQVVLASGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F L L+R +++ + V P + + L R A ++
Sbjct: 112 DFDLL---LERVIQRHGTEAVVYGVPGLTALSLIRAATRYV 149
>gi|297623823|ref|YP_003705257.1| hypothetical protein Trad_1595 [Truepera radiovictrix DSM 17093]
gi|297165003|gb|ADI14714.1| protein of unknown function DUF88 [Truepera radiovictrix DSM 17093]
Length = 173
Score = 42.7 bits (99), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 69/144 (47%), Gaps = 16/144 (11%)
Query: 6 EKIALFIDGANLYASSK--ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGD-------- 55
E++A+FIDG+NLY + G ++ ++ + + ++R YYY + D
Sbjct: 3 ERVAVFIDGSNLYNGMRDNLTGTRVNLQEFVAQLVCKRHLVRTYYYNAPLTDDYDTERRE 62
Query: 56 PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEH 115
+Q+F + ++ + ++ + F K V ++ VE A+E + +
Sbjct: 63 GQQRFFESLSRIPYVTVR----LGRLHRRFDGTLVEKGVDVAIAVESLSLAYENA--YDT 116
Query: 116 LVIFSGDGCFTTLVAALQRKVKKV 139
+++ SGDG + LV A++RK K V
Sbjct: 117 VLLVSGDGDYVQLVEAIKRKGKHV 140
>gi|148657548|ref|YP_001277753.1| hypothetical protein RoseRS_3445 [Roseiflexus sp. RS-1]
gi|148569658|gb|ABQ91803.1| protein of unknown function DUF88 [Roseiflexus sp. RS-1]
Length = 842
Score = 42.7 bits (99), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 78/179 (43%), Gaps = 40/179 (22%)
Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLK--AFRSRAIVIRAYYYTTVVGDPEQQ 59
+PR +A+FID N+Y S + L + ++ ++ A R ++ RAY
Sbjct: 36 NPRLDVAVFIDFENVYVSVRDKLDVNPNFEIIMDRVADLGRVVIARAY------------ 83
Query: 60 FSPLHPLLDWLHY---------NGFQVVAKVAKEFTENCGR--KRVKSSMDVELAVDAFE 108
DW Y NG + + + + GR + +K+S+D+ L +DA +
Sbjct: 84 -------ADWYRYPRVTSALYANGIEPMYVPTYYYDRDLGRTGRAIKNSVDMNLCIDAMK 136
Query: 109 ---QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
+ + V+ +GD F LV A+++ K+V I+ AS L + AD F+
Sbjct: 137 TLYTNPNIAKFVLATGDRDFIPLVNAIRQHGKEVIIIGVG----GAASGHLAQSADEFI 191
>gi|94985051|ref|YP_604415.1| hypothetical protein Dgeo_0945 [Deinococcus geothermalis DSM 11300]
gi|94555332|gb|ABF45246.1| protein of unknown function DUF88 [Deinococcus geothermalis DSM
11300]
Length = 181
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 67/141 (47%), Gaps = 6/141 (4%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
R ++ +FID NLY S++ L +++ +L++ ++ A YT + +
Sbjct: 7 RPRVGVFIDTQNLYHSARDLLERTVNFETILRSATEGRELVHAIAYTV----EREGEATA 62
Query: 64 HPLLDWLHYNGFQVV-AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
P + L G++V + G+ + + D+ + D + L+ +V+ SGD
Sbjct: 63 RPFIYKLSALGYKVRRMNLTLHHVTEGGKAIYEGNWDMGIVADMVRLIDHLDIVVLGSGD 122
Query: 123 GCFTTLVAALQRKVKKVTIVS 143
G FT +V LQ + K+V +++
Sbjct: 123 GDFTDVVEVLQERGKRVEVIA 143
>gi|212705003|ref|ZP_03313131.1| hypothetical protein DESPIG_03071 [Desulfovibrio piger ATCC 29098]
gi|212671555|gb|EEB32038.1| hypothetical protein DESPIG_03071 [Desulfovibrio piger ATCC 29098]
Length = 229
Score = 42.4 bits (98), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 93 RVKSSMDVELAVDAFEQSEGLEHL---VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDP 149
R K+S D+ L +D + H +I SGD FT L+ LQ ++ I+S S P
Sbjct: 99 RGKTSTDIHLVMDCMDDLSHPTHFDEFIILSGDADFTPLLIRLQEHARRTLILSVGYSSP 158
Query: 150 S-MASDQLRRQADYFMDLAYLKNE 172
+ A+ R + D+F+ A LK+E
Sbjct: 159 AYTAAASWRIREDWFLQQA-LKDE 181
>gi|254428823|ref|ZP_05042530.1| conserved hypothetical protein [Alcanivorax sp. DG881]
gi|196194992|gb|EDX89951.1| conserved hypothetical protein [Alcanivorax sp. DG881]
Length = 157
Score = 42.4 bits (98), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 72/161 (44%), Gaps = 15/161 (9%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
+ + + +D N+Y +++ A DY + + V++A Y GD +Q+
Sbjct: 2 KTVLILVDVQNVYYTTRQAFNRRFDYNQFWSTVTAEGQVVKAIAYAIDRGDKKQR----- 56
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
+ L GF+V K + ++ K DV +A+DA E + ++ +V+ SGDG
Sbjct: 57 EFQNILRAIGFEVKLKPFIQRSDGSA----KGDWDVGIAIDALEYAAEVDSVVLVSGDGD 112
Query: 125 FTTLVAALQ-RKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F LV L+ K K V + + +D L R A F+
Sbjct: 113 FDLLVDKLRVDKGKHVDVYGV----APLTADSLARAASRFV 149
>gi|325271797|ref|ZP_08138266.1| hypothetical protein G1E_03075 [Pseudomonas sp. TJI-51]
gi|324103068|gb|EGC00446.1| hypothetical protein G1E_03075 [Pseudomonas sp. TJI-51]
Length = 159
Score = 42.4 bits (98), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 71/161 (44%), Gaps = 15/161 (9%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-EQQFSPL 63
+KIALF D NLY + + A G +Y L ++ A Y GD +QQF +
Sbjct: 2 KKIALFADVQNLYYTVRQAHGCHFNYTALWADVCREGQIVEAVAYAIDRGDSKQQQFQQI 61
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF V K + ++ K DV + +D + + ++ +V+ SGDG
Sbjct: 62 ------LRNLGFDVRLKPFIQRSDGSA----KGDWDVGITLDVIDAASRVDQVVLASGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F L L+R +++ + V P + + L R A ++
Sbjct: 112 DFDLL---LERVIQRHGTEAVVYGVPGLTALSLIRAASRYV 149
>gi|220903862|ref|YP_002479174.1| hypothetical protein Ddes_0587 [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219868161|gb|ACL48496.1| protein of unknown function DUF88 [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 240
Score = 42.0 bits (97), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 92 KRVKSSMDVELAVDAFE---QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSD 148
R K+S D+ L +D + S + +I SGD FT L+ LQ ++ ++S S
Sbjct: 98 SRGKTSTDIHLVMDCMDDLSHSTKFDEFIILSGDADFTPLLIRLQEHARRTLVLSVGYSS 157
Query: 149 PS-MASDQLRRQADYFMDLA 167
P+ A+ R + D+F+ A
Sbjct: 158 PAYTAAASWRIREDWFLQQA 177
>gi|71278570|ref|YP_266902.1| hypothetical protein CPS_0134 [Colwellia psychrerythraea 34H]
gi|71144310|gb|AAZ24783.1| conserved hypothetical protein [Colwellia psychrerythraea 34H]
Length = 157
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 15/158 (9%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
+KIA+F+D N+Y +++ +YR L + ++ + A Y D +Q H
Sbjct: 2 KKIAVFVDVQNIYYTTRDTYAKQFNYRLLWQELMAQGEITIANAYAIQRSDDQQ-----H 56
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
L + GF V K + ++ K DV + +D E + ++ +++ SGDG
Sbjct: 57 KFQKALKHIGFDVKLKPYIQRSDGSA----KGDWDVGITIDIMEAAAEVDTVILLSGDGD 112
Query: 125 FTTLVAALQRKVKKVTIVST-VLSDPSMASDQLRRQAD 161
F L+ RKV++ VST V S + + L AD
Sbjct: 113 FDLLL----RKVREKYGVSTEVYSVEKLTAKSLVEAAD 146
>gi|90415555|ref|ZP_01223489.1| hypothetical protein GB2207_09566 [marine gamma proteobacterium
HTCC2207]
gi|90332878|gb|EAS48048.1| hypothetical protein GB2207_09566 [marine gamma proteobacterium
HTCC2207]
Length = 161
Score = 41.6 bits (96), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 18/163 (11%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ-FSPL 63
+KIA+F+D N+Y + K G +YR+L + + +++A Y D Q+ F +
Sbjct: 2 KKIAVFVDVQNIYYTVKEQFGCYFNYRELWRQLGEQGEIVQATAYAIERNDAGQRGFQQV 61
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE---QSEGLEHLVIFS 120
L GF+V K + ++ K DV +A+D + + E +V+ S
Sbjct: 62 ------LRDIGFEVKLKPFIQRSDGSA----KGDWDVGIAIDIMDCAATTNPPEEIVLLS 111
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163
GDG F L+A R ++ + ++V ++ + L AD+F
Sbjct: 112 GDGDFDLLLA---RVSQRYAVSTSVFGVAALTAASLIDAADHF 151
>gi|76802672|ref|YP_330767.1| hypothetical protein NP4076A [Natronomonas pharaonis DSM 2160]
gi|76558537|emb|CAI50129.1| conserved hypothetical protein [Natronomonas pharaonis DSM 2160]
Length = 165
Score = 41.6 bits (96), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 77/165 (46%), Gaps = 18/165 (10%)
Query: 6 EKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP--EQQFSP 62
+++A+ D NLY ++ + + DY +LL A +IRA Y + DP EQ+F
Sbjct: 8 QRVAVLADSQNLYHTAHSYYSRNPDYTELLSAAVRDRELIRAIAYV-IRADPPTEQEF-- 64
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
+ L GF+ K K F + K++ D+ + +DA + ++ V+ SGD
Sbjct: 65 ----FEALRDIGFETKIKDIKTFADGTQ----KANWDLGMCLDAVTLAPKIDTFVLASGD 116
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
G F L L+ + + + V +++L AD ++D++
Sbjct: 117 GDFARLCTHLRHE----GVRTEVFGFGDSTAEELIDAADSYVDMS 157
>gi|254417369|ref|ZP_05031111.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
gi|196175804|gb|EDX70826.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
Length = 302
Score = 41.6 bits (96), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 3 DPREKIALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
DP ++A+FID AN+Y S+ LGFD DY LL + + +A++YT + QQ
Sbjct: 184 DP-NRVAIFIDAANIYHSALQLGFDPPDYADLLAFLKRQYSSYQAFFYTGLDSTNRQQKR 242
Query: 62 PLHPLLDWLHYNGFQVVAK 80
LL L G+++++K
Sbjct: 243 ----LLFRLQNLGYKIISK 257
>gi|57234893|ref|YP_181094.1| hypothetical protein DET0347 [Dehalococcoides ethenogenes 195]
gi|57225341|gb|AAW40398.1| conserved hypothetical protein [Dehalococcoides ethenogenes 195]
Length = 194
Score = 41.6 bits (96), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 72/180 (40%), Gaps = 35/180 (19%)
Query: 1 MFDPREKIALFIDGANLYASSKA--LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVG---D 55
M D E++ +FIDG+N+Y K+ DID+ R ++R YYY VG +
Sbjct: 1 MTDTLERVMIFIDGSNMYHYLKSHFQRTDIDFGCFCSKIAGRRRLVRIYYYNAEVGRKEE 60
Query: 56 PE------------QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELA 103
PE ++ S + L L Y+G+ K +DV L+
Sbjct: 61 PERFNDQKKFFSSPEKISYMELRLGRLVYSGWPSTPPYEK-------------GVDVLLS 107
Query: 104 VDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
D + ++ +GD F + + A++ K V + L S +LR+ AD
Sbjct: 108 TDMLSHGFKNNFDTAILVAGDSDFVSALQAVKDNGKNVEV---ALFGKETTSMELRKVAD 164
>gi|219850544|ref|YP_002464977.1| hypothetical protein Cagg_3705 [Chloroflexus aggregans DSM 9485]
gi|219544803|gb|ACL26541.1| protein of unknown function DUF88 [Chloroflexus aggregans DSM 9485]
Length = 600
Score = 41.2 bits (95), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 80/191 (41%), Gaps = 43/191 (22%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFR--SRAIVIRAYYYTTVVGDPEQQFS 61
R +A+FID N+Y S + L ++ ++ R ++ RAY
Sbjct: 6 RPDVAVFIDFENIYVSVRDKLNATPNFEAIMDRCNDLGRVVISRAY-------------- 51
Query: 62 PLHPLLDWLHY---------NGFQVVAKVAKEFTENCGR--KRVKSSMDVELAVDAFE-- 108
DW Y N + + + ++ GR + +K+S+D+ L +DA +
Sbjct: 52 -----ADWYRYPRITSALYANAIEPIYVATYYYDKDAGRTGRAIKNSVDMNLCIDAMKTL 106
Query: 109 -QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
+ + V+ +GD F LV ++++ K+V I+ AS L + AD F+
Sbjct: 107 YTNPNISRFVLVTGDRDFIPLVHSIRQHGKEVYIIGIG----GAASTHLAQSADEFV--- 159
Query: 168 YLKNEIARDPD 178
+ + I R P+
Sbjct: 160 FYEQLIGRQPN 170
>gi|332993345|gb|AEF03400.1| hypothetical protein ambt_09370 [Alteromonas sp. SN2]
Length = 157
Score = 40.8 bits (94), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 63/137 (45%), Gaps = 10/137 (7%)
Query: 6 EKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
+ +ALF+D N+Y +++ + + DY + V++A Y GD +Q+
Sbjct: 2 DNVALFVDVQNIYYTTRQIHKCNFDYNHFWRLATEGRNVVKAVAYAIERGDTKQR----- 56
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
+ L GF+V K + + K DV + +DA E ++ + +V +GDG
Sbjct: 57 EFQNILRGIGFEVKLKPFIQRADGSA----KGDWDVGITIDAMEYADLADTIVFATGDGD 112
Query: 125 FTTLVAALQRKVKKVTI 141
F L + L K K+V +
Sbjct: 113 FDILASKLVDKGKEVEV 129
>gi|262189634|ref|ZP_06048020.1| hypothetical protein VIH_000054 [Vibrio cholerae CT 5369-93]
gi|262034486|gb|EEY52840.1| hypothetical protein VIH_000054 [Vibrio cholerae CT 5369-93]
Length = 145
Score = 40.8 bits (94), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 64/151 (42%), Gaps = 12/151 (7%)
Query: 18 YASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQV 77
Y + G DY + V++A Y DP+Q+ H +L + G +V
Sbjct: 3 YTCREQYGRHFDYNQFWSQVTQNRTVVKANAYAIASKDPQQR--QFHHILRGI---GLEV 57
Query: 78 VAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVK 137
+ K + ++ K DV +A+D +E ++ ++ +V+ SGDG F LV R +
Sbjct: 58 MLKPFIQRSDGSA----KGDWDVGIALDGYELAQEVDTVVLVSGDGDFEPLVT---RIAQ 110
Query: 138 KVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
+ + V P + + L A F + +
Sbjct: 111 RFQVKVEVYGVPKLTAQHLIDVASQFHPIEH 141
>gi|270307718|ref|YP_003329776.1| hypothetical protein DhcVS_287 [Dehalococcoides sp. VS]
gi|270153610|gb|ACZ61448.1| hypothetical protein DhcVS_287 [Dehalococcoides sp. VS]
Length = 194
Score = 40.8 bits (94), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 72/180 (40%), Gaps = 35/180 (19%)
Query: 1 MFDPREKIALFIDGANLYASSKA--LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVG---D 55
M D E++ +FIDG+N+Y K+ DID+ R ++R YYY VG +
Sbjct: 1 MTDTLERVMIFIDGSNMYHYLKSHFQRTDIDFGCFCSKIAGRRRLVRIYYYNAEVGRKEE 60
Query: 56 PE------------QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELA 103
PE ++ S + L L Y+G+ K +DV L+
Sbjct: 61 PERFNDQRKFFTSLEKISYMELRLGRLVYSGWPSTPPYEK-------------GVDVLLS 107
Query: 104 VDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
D + ++ +GD F + + A++ K V + L S +LR+ AD
Sbjct: 108 TDMLSHGFKNNFDTAILVAGDSDFVSALQAVKDNGKNVEV---ALFGKERTSMELRKVAD 164
>gi|313679721|ref|YP_004057460.1| hypothetical protein Ocepr_0830 [Oceanithermus profundus DSM 14977]
gi|313152436|gb|ADR36287.1| protein of unknown function DUF88 [Oceanithermus profundus DSM
14977]
Length = 184
Score = 40.8 bits (94), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 73/145 (50%), Gaps = 8/145 (5%)
Query: 2 FDPREKIALFIDGANLYASSK-ALGFDIDYRKLLK-AFRSRAIVIRAYYYTTVVGDPEQQ 59
++ +++ LF+D NLY S++ +++ LLK A + R +V RA T V + E
Sbjct: 7 WNAMQRVGLFVDTQNLYHSARDYYERTVNFESLLKRAVQGRQLV-RA---TAYVVEREND 62
Query: 60 FSPLHPLLDWLHYNGFQV-VAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVI 118
S P + L G++V ++ T + G+ + + D+ +A D + L+ +V+
Sbjct: 63 TSAW-PFIYKLSTMGYRVRRMNLSVHHTTDEGKPIYEGNWDMGIAADMVRLMDALDVVVL 121
Query: 119 FSGDGCFTTLVAALQRKVKKVTIVS 143
SGDG F ++ L K +V +++
Sbjct: 122 GSGDGDFVDILEVLMEKGIRVEVIA 146
>gi|92112887|ref|YP_572815.1| hypothetical protein Csal_0758 [Chromohalobacter salexigens DSM
3043]
gi|91795977|gb|ABE58116.1| protein of unknown function DUF88 [Chromohalobacter salexigens DSM
3043]
Length = 158
Score = 40.8 bits (94), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 70/161 (43%), Gaps = 13/161 (8%)
Query: 7 KIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
++A+F+D N+Y + + A G DYR+ + V+ Y T GD +Q+
Sbjct: 3 RVAIFVDTQNVYYTVREAYGKHFDYRRFWARATANREVLTVRCYATDKGDAKQR-----E 57
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
+ L GF+V K + + K DV + +DA E + + +V+ SGDG F
Sbjct: 58 FQNILRSIGFEVRLKPFIQRADGSA----KGDWDVGITLDAIEYAAQADVVVLVSGDGDF 113
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
L ++ K V V P + ++ L A F+ +
Sbjct: 114 DLLAEKIREVHGKRVEVYGV---PKLTANSLINAASQFIPI 151
>gi|325525773|gb|EGD03507.1| hypothetical protein B1M_16120 [Burkholderia sp. TJI49]
Length = 287
Score = 40.4 bits (93), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122
DW Y GF+ A E E R+ K+S D+ L VDA + H+ VI SGD
Sbjct: 45 DWDRYKGFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGD 104
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F+ LV+ L+ KKV V S SD L D F+
Sbjct: 105 SDFSPLVSKLRENAKKVIGVGVKKS----TSDLLVANCDEFI 142
>gi|218888135|ref|YP_002437456.1| hypothetical protein DvMF_3051 [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218759089|gb|ACL09988.1| protein of unknown function DUF88 [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 418
Score = 40.4 bits (93), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 95 KSSMDVEL---AVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS- 150
K+S D+ L +DA S + +I SGD FT L+ LQ ++ ++S + P+
Sbjct: 101 KTSADIHLVMDCMDALNHSTRFDEFIILSGDADFTPLLIRLQEHARRPLVLSVGYTSPAY 160
Query: 151 MASDQLRRQADYFMDLAYLKNEIARDP 177
A+ R + D+F+ A L++E +P
Sbjct: 161 TAAASWRIREDWFVQQA-LEDERPAEP 186
>gi|209694823|ref|YP_002262751.1| hypothetical protein VSAL_I1288 [Aliivibrio salmonicida LFI1238]
gi|208008774|emb|CAQ78973.1| conserved hypothetical protein [Aliivibrio salmonicida LFI1238]
Length = 157
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 72/161 (44%), Gaps = 15/161 (9%)
Query: 6 EKIALFIDGANLYASSKAL-GFDIDYRKLL-KAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+ +A+ +D N+Y +++ + DY L K R +V Y D ++QF
Sbjct: 2 KTVAILVDVQNIYYTTRDVYQRHFDYNALWAKVTDGRKVVGANAYAIARSDDKQKQF--- 58
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
H +L + GF V K + + K DV +A+DA E +E + +VI SGDG
Sbjct: 59 HNILRGI---GFDVKLKPFIQRRDGSA----KGDWDVGIALDAIELAEQADIVVILSGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F LV +Q + K V V + ++ L AD F+
Sbjct: 112 DFELLVQRIQSRFNKEVEVYGV---ADLTANALIDAADRFI 149
>gi|260769223|ref|ZP_05878156.1| hypothetical protein VFA_002281 [Vibrio furnissii CIP 102972]
gi|260614561|gb|EEX39747.1| hypothetical protein VFA_002281 [Vibrio furnissii CIP 102972]
gi|315181763|gb|ADT88676.1| hypothetical protein vfu_B00438 [Vibrio furnissii NCTC 11218]
Length = 157
Score = 40.0 bits (92), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 13/162 (8%)
Query: 6 EKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
E IA+ +D N+Y + K +Y + + V++A Y D Q+ H
Sbjct: 2 ETIAILVDVQNVYYTCKERYQRHFNYNHFWQQVTNGRHVVKANAYAIASNDSRQR--QFH 59
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
+L + GF+V+ K + ++ K DV + +DA E + ++ +V+ SGDG
Sbjct: 60 HILRGI---GFEVMLKPYIQRSDGSA----KGDWDVGITLDAIELAPDVDTVVLVSGDGD 112
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
F L +Q K K V V P + + L A+ ++ +
Sbjct: 113 FDILAKRIQDKYGKQVEVYGV---PGLTARSLVDAANRYVTI 151
>gi|134295221|ref|YP_001118956.1| hypothetical protein Bcep1808_1110 [Burkholderia vietnamiensis G4]
gi|134138378|gb|ABO54121.1| protein of unknown function DUF88 [Burkholderia vietnamiensis G4]
Length = 507
Score = 40.0 bits (92), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122
DW Y GF+ A E E R+ K+S D+ L VDA + H+ VI SGD
Sbjct: 54 DWERYKGFKASMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGD 113
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F+ LV+ L+ KKV V S SD L D F+
Sbjct: 114 SDFSPLVSKLRENAKKVIGVGVKKS----TSDLLVANCDEFI 151
>gi|309789837|ref|ZP_07684416.1| hypothetical protein OSCT_0367 [Oscillochloris trichoides DG6]
gi|308228141|gb|EFO81790.1| hypothetical protein OSCT_0367 [Oscillochloris trichoides DG6]
Length = 635
Score = 40.0 bits (92), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 76/177 (42%), Gaps = 40/177 (22%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLK--AFRSRAIVIRAYYYTTVVGDPEQQFS 61
R +A+FID N+Y S + L + ++ ++ R ++ RAY
Sbjct: 7 RPDVAVFIDFENVYVSVRDKLNANPNFEAIMDRCGDLGRVVISRAY-------------- 52
Query: 62 PLHPLLDWLHY---------NGFQVVAKVAKEFTENCGR--KRVKSSMDVELAVDAFE-- 108
DW Y N + + + ++ GR + +K+S+D+ L +DA +
Sbjct: 53 -----ADWYRYPRVTSALYANAIEPIYVATYYYDKDMGRTGRAIKNSVDMNLCIDAMKTL 107
Query: 109 -QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
+ + V+ +GD F LV +++++ K+V I+ AS L + AD F+
Sbjct: 108 FTNTNISRFVLVTGDRDFIPLVNSIRQQGKEVYIIGIG----GAASTHLAQSADEFV 160
>gi|75909290|ref|YP_323586.1| hypothetical protein Ava_3082 [Anabaena variabilis ATCC 29413]
gi|75703015|gb|ABA22691.1| Protein of unknown function DUF88 [Anabaena variabilis ATCC 29413]
Length = 261
Score = 40.0 bits (92), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 94 VKSSMDVELAVDAFEQSEGL--EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151
+K+S D +L VD + + L + +I SGDG FTTL+ LQ+ K+V V+++
Sbjct: 83 LKNSADNQLIVDCLQVNNNLSPDIFIIVSGDGDFTTLINPLQKLGKQV----IVIAEAGN 138
Query: 152 ASDQLRRQADYFMDLAYLKNEIARD 176
+L+ AD F + L +I ++
Sbjct: 139 VKQKLKELADEFYFIEELSQKIQQE 163
>gi|241766896|ref|ZP_04764705.1| protein of unknown function DUF88 [Acidovorax delafieldii 2AN]
gi|241362653|gb|EER58487.1| protein of unknown function DUF88 [Acidovorax delafieldii 2AN]
Length = 316
Score = 40.0 bits (92), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122
DW Y GF+ A E E R+ K+S D+ L VDA + H+ VI SGD
Sbjct: 54 DWERYKGFKATMHEANFELIEIPHVRQSGKNSADIRLVVDALDLCYTKSHVNTFVIISGD 113
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F+ LV+ L+ K+V V S SD L D F+
Sbjct: 114 SDFSPLVSKLRENAKQVIGVGVKQS----TSDLLIANCDEFI 151
>gi|186475309|ref|YP_001856779.1| hypothetical protein Bphy_0541 [Burkholderia phymatum STM815]
gi|184191768|gb|ACC69733.1| protein of unknown function DUF88 [Burkholderia phymatum STM815]
Length = 440
Score = 39.7 bits (91), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122
DW Y GF+ A E E R+ K+S D+ L VDA + H+ VI SGD
Sbjct: 54 DWDRYKGFKAAMHEANFELIEIPHVRQSGKNSADIRLVVDALDLCYTKSHVNTFVIISGD 113
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F+ LV+ L+ K+V V S SD L D F+
Sbjct: 114 SDFSPLVSKLRENAKQVIGVGVQRS----TSDLLTANCDEFI 151
>gi|206559459|ref|YP_002230220.1| hypothetical protein BCAL1072 [Burkholderia cenocepacia J2315]
gi|198035497|emb|CAR51375.1| conserved hypothetical protein [Burkholderia cenocepacia J2315]
Length = 491
Score = 39.7 bits (91), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122
DW Y GF+ A E E R+ K+S D+ L VDA + H+ VI SGD
Sbjct: 54 DWDRYKGFKASMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGD 113
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F+ LV+ L+ KKV V S SD L D F+
Sbjct: 114 SDFSPLVSKLRENAKKVIGVGVKKS----TSDLLVANCDEFI 151
>gi|161525283|ref|YP_001580295.1| hypothetical protein Bmul_2113 [Burkholderia multivorans ATCC
17616]
gi|189349979|ref|YP_001945607.1| hypothetical protein BMULJ_01131 [Burkholderia multivorans ATCC
17616]
gi|160342712|gb|ABX15798.1| protein of unknown function DUF88 [Burkholderia multivorans ATCC
17616]
gi|189334001|dbj|BAG43071.1| conserved hypothetical protein [Burkholderia multivorans ATCC
17616]
Length = 508
Score = 39.7 bits (91), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122
DW Y GF+ A E E R+ K+S D+ L VDA + H+ VI SGD
Sbjct: 54 DWDRYKGFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKSHVDTFVIVSGD 113
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F+ LV+ L+ KKV V S SD L D F+
Sbjct: 114 SDFSPLVSKLRENAKKVIGVGVKKS----TSDLLVANCDEFI 151
>gi|167589253|ref|ZP_02381641.1| hypothetical protein BuboB_28211 [Burkholderia ubonensis Bu]
Length = 280
Score = 39.7 bits (91), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122
DW Y GF+ A E E R+ K+S D+ L VDA + H+ VI SGD
Sbjct: 45 DWDRYKGFKASMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGD 104
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F+ LV+ L+ KKV V S SD L D F+
Sbjct: 105 SDFSPLVSKLRENAKKVIGVGVKQS----TSDLLVANCDEFI 142
>gi|171317829|ref|ZP_02907008.1| protein of unknown function DUF88 [Burkholderia ambifaria MEX-5]
gi|171096994|gb|EDT41862.1| protein of unknown function DUF88 [Burkholderia ambifaria MEX-5]
Length = 643
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 67 LDWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSG 121
DW Y GF+ A E E R+ K+S D+ L VDA + H+ VI SG
Sbjct: 53 CDWERYKGFKASMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKSHVDTFVIISG 112
Query: 122 DGCFTTLVAALQRKVKKVTIV 142
D F+ LV+ L+ KKV V
Sbjct: 113 DSDFSPLVSKLRENAKKVIGV 133
>gi|119898953|ref|YP_934166.1| hypothetical protein azo2662 [Azoarcus sp. BH72]
gi|119671366|emb|CAL95279.1| conserved hypothetical protein [Azoarcus sp. BH72]
Length = 481
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122
DW Y GF+ A E E R+ K+S D+ L VDA + H+ VI SGD
Sbjct: 54 DWERYKGFKAAMHEANFELIEIPHVRQSGKNSADIRLVVDALDLCYTKAHVNTFVIISGD 113
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F+ LV+ L+ K+V V S SD L D F+
Sbjct: 114 SDFSPLVSKLRENAKQVIGVGVKQS----TSDLLIANCDEFI 151
>gi|107022270|ref|YP_620597.1| hypothetical protein Bcen_0714 [Burkholderia cenocepacia AU 1054]
gi|116689215|ref|YP_834838.1| hypothetical protein Bcen2424_1193 [Burkholderia cenocepacia
HI2424]
gi|105892459|gb|ABF75624.1| protein of unknown function DUF88 [Burkholderia cenocepacia AU
1054]
gi|116647304|gb|ABK07945.1| protein of unknown function DUF88 [Burkholderia cenocepacia HI2424]
Length = 498
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122
DW Y GF+ A E E R+ K+S D+ L VDA + H+ VI SGD
Sbjct: 54 DWDRYKGFKASMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGD 113
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F+ LV+ L+ KKV V S SD L D F+
Sbjct: 114 SDFSPLVSKLRENAKKVIGVGVKKS----TSDLLVANCDEFI 151
>gi|221201416|ref|ZP_03574455.1| protein of unknown function DUF88 [Burkholderia multivorans CGD2M]
gi|221208028|ref|ZP_03581034.1| protein of unknown function DUF88 [Burkholderia multivorans CGD2]
gi|221172213|gb|EEE04654.1| protein of unknown function DUF88 [Burkholderia multivorans CGD2]
gi|221178684|gb|EEE11092.1| protein of unknown function DUF88 [Burkholderia multivorans CGD2M]
Length = 479
Score = 39.3 bits (90), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122
DW Y GF+ A E E R+ K+S D+ L VDA + H+ VI SGD
Sbjct: 45 DWDRYKGFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKSHVDTFVIVSGD 104
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F+ LV+ L+ KKV V S SD L D F+
Sbjct: 105 SDFSPLVSKLRENAKKVIGVGVKKS----TSDLLVANCDEFI 142
>gi|170732518|ref|YP_001764465.1| hypothetical protein Bcenmc03_1168 [Burkholderia cenocepacia MC0-3]
gi|169815760|gb|ACA90343.1| protein of unknown function DUF88 [Burkholderia cenocepacia MC0-3]
Length = 498
Score = 39.3 bits (90), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122
DW Y GF+ A E E R+ K+S D+ L VDA + H+ VI SGD
Sbjct: 54 DWDRYKGFKASMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGD 113
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F+ LV+ L+ KKV V S SD L D F+
Sbjct: 114 SDFSPLVSKLRENAKKVIGVGVKKS----TSDLLVANCDEFI 151
>gi|254245848|ref|ZP_04939169.1| hypothetical protein BCPG_00568 [Burkholderia cenocepacia PC184]
gi|124870624|gb|EAY62340.1| hypothetical protein BCPG_00568 [Burkholderia cenocepacia PC184]
Length = 500
Score = 39.3 bits (90), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122
DW Y GF+ A E E R+ K+S D+ L VDA + H+ VI SGD
Sbjct: 54 DWDRYKGFKASMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGD 113
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F+ LV+ L+ KKV V S SD L D F+
Sbjct: 114 SDFSPLVSKLRENAKKVIGVGVKKS----TSDLLVANCDEFI 151
>gi|221214025|ref|ZP_03586998.1| protein of unknown function DUF88 [Burkholderia multivorans CGD1]
gi|221166202|gb|EED98675.1| protein of unknown function DUF88 [Burkholderia multivorans CGD1]
Length = 479
Score = 39.3 bits (90), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122
DW Y GF+ A E E R+ K+S D+ L VDA + H+ VI SGD
Sbjct: 45 DWDRYKGFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKSHVDTFVIVSGD 104
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F+ LV+ L+ KKV V S SD L D F+
Sbjct: 105 SDFSPLVSKLRENAKKVIGVGVKKS----TSDLLVANCDEFI 142
>gi|56477068|ref|YP_158657.1| hypothetical protein ebA2897 [Aromatoleum aromaticum EbN1]
gi|56313111|emb|CAI07756.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
Length = 510
Score = 39.3 bits (90), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 71/178 (39%), Gaps = 41/178 (23%)
Query: 1 MFDPRE--KIALFIDGANLYASSKALGF-DIDYRK------LLKAFRSRAIVIRAYYYTT 51
M P E +ALF D N+ ALG D +Y K L + +IV++ Y
Sbjct: 1 MASPHETASMALFCDFENV-----ALGVRDANYEKFDIKRVLERLLLKGSIVVKKAY--- 52
Query: 52 VVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQ 109
DW Y GF+ A E E R+ K+S D+ L VDA +
Sbjct: 53 ---------------CDWDRYKGFKATMHEANFELIEIPHVRQSGKNSADIRLVVDALDL 97
Query: 110 SEGLEHL---VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
H+ VI SGD F+ LV+ L+ K+V V S SD L D F+
Sbjct: 98 CYTKSHVNTFVIISGDSDFSPLVSKLRENAKQVIGVGVKQS----TSDLLIANCDEFI 151
>gi|320334669|ref|YP_004171380.1| hypothetical protein Deima_2072 [Deinococcus maricopensis DSM
21211]
gi|319755958|gb|ADV67715.1| Domain of unknown function DUF88 [Deinococcus maricopensis DSM
21211]
Length = 182
Score = 39.3 bits (90), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 64/139 (46%), Gaps = 6/139 (4%)
Query: 7 KIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
++ +FID NLY S++ L +++ +LL+ ++RA Y + P
Sbjct: 9 RVGVFIDTQNLYHSARDLYERTVNFERLLQYATEGRELVRAVSYVV----EREGEGTARP 64
Query: 66 LLDWLHYNGFQVVAKVAK-EFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
+ L G++V + T G+ + + D+ + D + L+ +V+ SGDG
Sbjct: 65 FIYKLSTIGYKVRRMTLQLHHTNEQGKAIWEGNWDMGIVADMTRLLDHLDVIVLGSGDGD 124
Query: 125 FTTLVAALQRKVKKVTIVS 143
FT +V Q + +V +++
Sbjct: 125 FTDMVEVFQERGVRVEVIA 143
>gi|67921187|ref|ZP_00514706.1| hypothetical protein CwatDRAFT_5542 [Crocosphaera watsonii WH
8501]
gi|67857304|gb|EAM52544.1| hypothetical protein CwatDRAFT_5542 [Crocosphaera watsonii WH
8501]
Length = 76
Score = 39.3 bits (90), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 26/34 (76%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLL 34
+ + R ++A+FIDG+NL+ ++ LG +IDY KLL
Sbjct: 41 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLL 74
>gi|78065774|ref|YP_368543.1| hypothetical protein Bcep18194_A4302 [Burkholderia sp. 383]
gi|77966519|gb|ABB07899.1| protein of unknown function DUF88 [Burkholderia sp. 383]
Length = 496
Score = 39.3 bits (90), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122
DW Y GF+ A E E R+ K+S D+ L VDA + H+ VI SGD
Sbjct: 54 DWDRYKGFKASMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGD 113
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F+ LV+ L+ KKV V S SD L D F+
Sbjct: 114 SDFSPLVSKLRENAKKVIGVGVKKS----TSDLLVANCDEFI 151
>gi|282895639|ref|ZP_06303764.1| hypothetical protein CRD_00263 [Raphidiopsis brookii D9]
gi|281199333|gb|EFA74198.1| hypothetical protein CRD_00263 [Raphidiopsis brookii D9]
Length = 96
Score = 38.9 bits (89), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 97 SMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
+++VE+AVD + + V+ SGDG V A+ +V ++ +M SD L
Sbjct: 6 NLNVEIAVDMITLAPYYDTAVLVSGDGDLAYAVNAVTSLGSRVEVIGL----QTMTSDSL 61
Query: 157 RRQADYFMDLAYLKNEIARD 176
ADYF+D +K I +D
Sbjct: 62 IDVADYFIDFDSIKQYIQKD 81
>gi|172060127|ref|YP_001807779.1| hypothetical protein BamMC406_1072 [Burkholderia ambifaria MC40-6]
gi|171992644|gb|ACB63563.1| protein of unknown function DUF88 [Burkholderia ambifaria MC40-6]
Length = 501
Score = 38.9 bits (89), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122
DW Y GF+ A E E R+ K+S D+ L VDA + H+ VI SGD
Sbjct: 54 DWERYKGFKASMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGD 113
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F+ LV+ L+ KKV V S SD L D F+
Sbjct: 114 SDFSPLVSKLRENAKKVIGVGVKKS----TSDLLVANCDEFI 151
>gi|222526169|ref|YP_002570640.1| hypothetical protein Chy400_2928 [Chloroflexus sp. Y-400-fl]
gi|222450048|gb|ACM54314.1| protein of unknown function DUF88 [Chloroflexus sp. Y-400-fl]
Length = 652
Score = 38.9 bits (89), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 79/190 (41%), Gaps = 43/190 (22%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFR--SRAIVIRAYYYTTVVGDPEQQFS 61
R +A+FID N+Y S + L ++ ++ R ++ RAY
Sbjct: 6 RPDVAVFIDFENIYVSVRDKLNATPNFEAIMDRCNDLGRVVISRAY-------------- 51
Query: 62 PLHPLLDWLHY---------NGFQVVAKVAKEFTENCGR--KRVKSSMDVELAVDAFE-- 108
DW Y N + + + ++ GR + +K+S+D+ L +DA +
Sbjct: 52 -----ADWYRYPRITSALYANAIEPIYVATYYYDKDAGRTGRAIKNSVDMNLCIDAMKTL 106
Query: 109 -QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
+ + V+ +GD F LV ++++ K+V I+ AS L + AD F+
Sbjct: 107 YTNPNVARFVLVTGDRDFIPLVHSIRQHGKEVYIIGIG----GAASTHLAQSADEFV--- 159
Query: 168 YLKNEIARDP 177
+ + I R P
Sbjct: 160 FYEQLIGRQP 169
>gi|163848259|ref|YP_001636303.1| hypothetical protein Caur_2709 [Chloroflexus aurantiacus J-10-fl]
gi|163669548|gb|ABY35914.1| protein of unknown function DUF88 [Chloroflexus aurantiacus
J-10-fl]
Length = 669
Score = 38.9 bits (89), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 79/190 (41%), Gaps = 43/190 (22%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFR--SRAIVIRAYYYTTVVGDPEQQFS 61
R +A+FID N+Y S + L ++ ++ R ++ RAY
Sbjct: 23 RPDVAVFIDFENIYVSVRDKLNATPNFEAIMDRCNDLGRVVISRAY-------------- 68
Query: 62 PLHPLLDWLHY---------NGFQVVAKVAKEFTENCGR--KRVKSSMDVELAVDAFE-- 108
DW Y N + + + ++ GR + +K+S+D+ L +DA +
Sbjct: 69 -----ADWYRYPRITSALYANAIEPIYVATYYYDKDAGRTGRAIKNSVDMNLCIDAMKTL 123
Query: 109 -QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
+ + V+ +GD F LV ++++ K+V I+ AS L + AD F+
Sbjct: 124 YTNPNVARFVLVTGDRDFIPLVHSIRQHGKEVYIIGIG----GAASTHLAQSADEFV--- 176
Query: 168 YLKNEIARDP 177
+ + I R P
Sbjct: 177 FYEQLIGRQP 186
>gi|320450466|ref|YP_004202562.1| hypothetical protein TSC_c13940 [Thermus scotoductus SA-01]
gi|320150635|gb|ADW22013.1| hypothetical protein TSC_c13940 [Thermus scotoductus SA-01]
Length = 178
Score = 38.9 bits (89), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 68/144 (47%), Gaps = 10/144 (6%)
Query: 4 PREKIALFIDGANLYASSK-ALGFDIDYRKLLK-AFRSRAIVIRAYYYTTVVGDPEQQFS 61
P +++ +F+D NLY S++ ++++ LL+ A R +V Y GD +
Sbjct: 7 PDQRVGVFVDTQNLYHSARDYYERNVNFESLLRFAVGGRRLVRATAYVVEKEGD-----T 61
Query: 62 PLHPLLDWLHYNGFQV--VAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119
P + L G++V + KE E G+ + + D+ +A D L+ +V+
Sbjct: 62 SAWPFIYKLSTIGYRVRRMYLTVKELGEG-GKPIYEGNWDMGIAADMVRLMPHLDVVVLG 120
Query: 120 SGDGCFTTLVAALQRKVKKVTIVS 143
SGDG F ++ L + +V +++
Sbjct: 121 SGDGDFVEILEVLMERGIRVEVIA 144
>gi|73748197|ref|YP_307436.1| hypothetical protein cbdb_A289 [Dehalococcoides sp. CBDB1]
gi|147668972|ref|YP_001213790.1| hypothetical protein DehaBAV1_0326 [Dehalococcoides sp. BAV1]
gi|289432247|ref|YP_003462120.1| hypothetical protein DehalGT_0297 [Dehalococcoides sp. GT]
gi|73659913|emb|CAI82520.1| conserved hypothetical protein [Dehalococcoides sp. CBDB1]
gi|146269920|gb|ABQ16912.1| protein of unknown function DUF88 [Dehalococcoides sp. BAV1]
gi|288945967|gb|ADC73664.1| protein of unknown function DUF88 [Dehalococcoides sp. GT]
Length = 194
Score = 38.9 bits (89), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 70/180 (38%), Gaps = 35/180 (19%)
Query: 1 MFDPREKIALFIDGANLYASSKA--LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58
M D E++ +FIDG+N+Y K+ DID+ ++R YYY VG E+
Sbjct: 1 MTDTLERVMIFIDGSNMYHYLKSHFQRTDIDFGCFCSKIAGHRRLVRIYYYNAEVGRKEE 60
Query: 59 Q---------FSPLHPL------LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELA 103
F+ L + L L Y+G+ K +DV L+
Sbjct: 61 PERFNDQKKFFTSLEKIPYMELRLGRLVYSGWPATPPYEK-------------GVDVLLS 107
Query: 104 VDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
D + ++ +GD F + + A++ K V + L S +LR+ AD
Sbjct: 108 TDMLSHGFKNNFDTAILVAGDSDFVSALQAVKDNGKNVEV---ALFGKESTSVELRKVAD 164
>gi|78357527|ref|YP_388976.1| hypothetical protein Dde_2484 [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78219932|gb|ABB39281.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 439
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 92 KRVKSSMDVEL---AVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSD 148
K+ K+S D+ L A+DA + +I SGD FT L+ L+ +K ++S +
Sbjct: 98 KQGKTSADIHLVIDALDALSHPTYFDEFIILSGDADFTPLLIRLREHARKTLVLSVGFTS 157
Query: 149 PSMAS 153
P+ A+
Sbjct: 158 PAYAA 162
>gi|115351126|ref|YP_772965.1| hypothetical protein Bamb_1072 [Burkholderia ambifaria AMMD]
gi|115281114|gb|ABI86631.1| protein of unknown function DUF88 [Burkholderia ambifaria AMMD]
Length = 507
Score = 38.5 bits (88), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122
DW Y GF+ A E E R+ K+S D+ L VDA + H+ VI SGD
Sbjct: 54 DWERYKGFKASMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGD 113
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F+ LV+ L+ KKV V S SD L D F+
Sbjct: 114 SDFSPLVSKLRENAKKVIGVGVKKS----TSDLLVANCDEFI 151
>gi|302325583|gb|ADL24784.1| conserved domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 253
Score = 38.5 bits (88), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 24/141 (17%)
Query: 9 ALFIDGANLYASSKALGFDIDYRKLLKAFRSRA-IVIRAYYYTTVVGDPEQQFSP-LHPL 66
A+F+D NL ++ L+K+ +S+ +VIR Y + SP L PL
Sbjct: 24 AVFVDAENL----TFWAYNNGVHDLMKSLQSQGPVVIRKAY--------GKWTSPQLSPL 71
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGC 124
+ NGF+++ + + G K+S D+++ VDA E + L+ +V+ +GD
Sbjct: 72 QQEFNINGFELI----QTYHPITG----KNSADIKMVVDAMEAATNPCLQTIVLATGDSD 123
Query: 125 FTTLVAALQRKVKKVTIVSTV 145
F+ L L+ KKV V +
Sbjct: 124 FSPLFRKLREMGKKVIGVGPL 144
>gi|197335397|ref|YP_002155926.1| hypothetical protein VFMJ11_1205 [Vibrio fischeri MJ11]
gi|197316887|gb|ACH66334.1| conserved hypothetical protein [Vibrio fischeri MJ11]
Length = 157
Score = 38.5 bits (88), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 15/161 (9%)
Query: 6 EKIALFIDGANLYASSKAL-GFDIDYRKLL-KAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+ +A+ +D N+Y +++ + DY L K R +V Y D ++QF
Sbjct: 2 KTVAILVDVQNIYYTTRDVYQRHFDYNALWAKVTEGRTVVGANAYAIARSDDKQKQF--- 58
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
H +L + GF V K + + K DV + +DA E +E + +V+ SGDG
Sbjct: 59 HNILRGI---GFDVKLKPFIQRRDGSA----KGDWDVGITLDAIELAEQADIVVLLSGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F L+ +Q + K V V + ++ L AD F+
Sbjct: 112 DFDLLIKRIQSRFNKEVEVYGV---ADLTANSLIDAADRFI 149
>gi|300087254|ref|YP_003757776.1| hypothetical protein Dehly_0124 [Dehalogenimonas
lykanthroporepellens BL-DC-9]
gi|299526987|gb|ADJ25455.1| protein of unknown function DUF88 [Dehalogenimonas
lykanthroporepellens BL-DC-9]
Length = 227
Score = 38.5 bits (88), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 6 EKIALFIDGANLYASSKALGF--DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58
+++ +FIDG+N+Y S KA DID K +IR YYY VG E+
Sbjct: 6 DRVMIFIDGSNMYHSLKAHWHRSDIDLSKFCAKLVGERRLIRIYYYNVEVGQREE 60
>gi|261414502|ref|YP_003248185.1| protein of unknown function DUF88 [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261370958|gb|ACX73703.1| protein of unknown function DUF88 [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 235
Score = 38.1 bits (87), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 24/141 (17%)
Query: 9 ALFIDGANLYASSKALGFDIDYRKLLKAFRSRA-IVIRAYYYTTVVGDPEQQFSP-LHPL 66
A+F+D NL ++ L+K+ +S+ +VIR Y + SP L PL
Sbjct: 6 AVFVDAENL----TFWAYNNGVHDLMKSLQSQGPVVIRKAY--------GKWTSPQLSPL 53
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGC 124
+ NGF+++ + + G K+S D+++ VDA E + L+ +V+ +GD
Sbjct: 54 QQEFNINGFELI----QTYHPITG----KNSADIKMVVDAMEAATNPCLQTIVLATGDSD 105
Query: 125 FTTLVAALQRKVKKVTIVSTV 145
F+ L L+ KKV V +
Sbjct: 106 FSPLFRKLREMGKKVIGVGPL 126
>gi|294666831|ref|ZP_06732064.1| carboxylesterase [Xanthomonas fuscans subsp. aurantifolii str. ICPB
10535]
gi|292603415|gb|EFF46833.1| carboxylesterase [Xanthomonas fuscans subsp. aurantifolii str. ICPB
10535]
Length = 222
Score = 38.1 bits (87), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 81 VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGL-EHLVIFSG--DGCFTTLVAALQRKVK 137
V +F E + + SM A+ A EQS G+ ++ +G G TL LQR V
Sbjct: 73 VGMDFAERADKAGIAESMAQVEALIAREQSRGIAPERILLAGFSQGGAVTLAVGLQRSVP 132
Query: 138 KVTIV--STVLSDPSMASDQLRRQA 160
++ ST L DP+ A+ QL+ A
Sbjct: 133 LAGLIAMSTYLPDPAAAASQLQPAA 157
>gi|221195605|ref|ZP_03568659.1| conserved hypothetical protein [Atopobium rimae ATCC 49626]
gi|221184371|gb|EEE16764.1| conserved hypothetical protein [Atopobium rimae ATCC 49626]
Length = 256
Score = 38.1 bits (87), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 24/141 (17%)
Query: 4 PREKIALFIDGANLYASSKAL--GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
P+ IA+FID N S + + +L+ + R + RAY +S
Sbjct: 7 PQSSIAVFIDYENFPVGSNGSRGALKLVFERLVD--KGRITIKRAYC----------DWS 54
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHL---VI 118
+ LH G +++ E +N ++ K+S D+ LAVDA E +H+ I
Sbjct: 55 RHEAVKPALHELGVELI-----EIPDNS--QKGKNSADIHLAVDALEACLTKDHIDTFAI 107
Query: 119 FSGDGCFTTLVAALQRKVKKV 139
SGD F+ LVA L+ K V
Sbjct: 108 LSGDSDFSPLVAKLKEYDKTV 128
>gi|258593302|emb|CBE69641.1| conserved protein of unknown function [NC10 bacterium 'Dutch
sediment']
Length = 251
Score = 38.1 bits (87), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 5/54 (9%)
Query: 91 RKRV--KSSMDVELAVDAFEQSEGLEHL---VIFSGDGCFTTLVAALQRKVKKV 139
+KR+ K+S D+ LAVDA + + EHL VI SGD F+ LV+ L+ K+V
Sbjct: 74 QKRISGKNSADIRLAVDAMDMAYSKEHLDTFVIVSGDSDFSPLVSKLRENNKEV 127
>gi|59711738|ref|YP_204514.1| hypothetical protein VF_1131 [Vibrio fischeri ES114]
gi|59479839|gb|AAW85626.1| conserved protein [Vibrio fischeri ES114]
Length = 159
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 12/135 (8%)
Query: 6 EKIALFIDGANLYASSKAL-GFDIDYRKLL-KAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+ +A+ +D N+Y +++ + DY L K R +V Y D ++QF
Sbjct: 4 KTVAILVDVQNIYYTTRDVYQRHFDYNALWAKVTEGRTVVGANAYAIARSDDKQKQF--- 60
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
H +L + GF V K + + K DV + +DA E +E + +V+ SGDG
Sbjct: 61 HNILRGI---GFDVKLKPFIQRRDGSA----KGDWDVGITLDAIELAEQADIVVLLSGDG 113
Query: 124 CFTTLVAALQRKVKK 138
F L+ +Q + K
Sbjct: 114 DFDLLIKRIQSRFNK 128
>gi|328950408|ref|YP_004367743.1| Domain of unknown function DUF88 [Marinithermus hydrothermalis DSM
14884]
gi|328450732|gb|AEB11633.1| Domain of unknown function DUF88 [Marinithermus hydrothermalis DSM
14884]
Length = 186
Score = 37.7 bits (86), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 66/145 (45%), Gaps = 8/145 (5%)
Query: 2 FDPREKIALFIDGANLYASSK-ALGFDIDYRKLLK-AFRSRAIVIRAYYYTTVVGDPEQQ 59
+ P +++ +F+D NLY S++ +++ LL A R +V Y GD
Sbjct: 7 WHPTQRVGVFVDTQNLYHSARDYYERTVNFASLLNYAVAGRQLVRATAYVVERDGD---- 62
Query: 60 FSPLHPLLDWLHYNGFQVVAKVAK-EFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVI 118
+ P + L G++V + T + G+ + + D+ +A D L+ +V+
Sbjct: 63 -TSAWPFIYKLSTIGYRVRRMTLQLHHTTDDGKPIYEGNWDMGIAADMVRLMHTLDVVVL 121
Query: 119 FSGDGCFTTLVAALQRKVKKVTIVS 143
SGDG F ++ L + +V +V+
Sbjct: 122 GSGDGDFVEILEVLMERGIRVEVVA 146
>gi|238059538|ref|ZP_04604247.1| hypothetical protein MCAG_00504 [Micromonospora sp. ATCC 39149]
gi|237881349|gb|EEP70177.1| hypothetical protein MCAG_00504 [Micromonospora sp. ATCC 39149]
Length = 367
Score = 37.7 bits (86), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 64/148 (43%), Gaps = 23/148 (15%)
Query: 3 DPREKIALFIDGANLYASSKAL--GFDIDYRKLLKAF--RSRAIVIRAYYYTTVVGDPEQ 58
D ++IALF+D NL ++ G D R + A R R +V RAY + + +
Sbjct: 5 DHEDRIALFLDYENLALGAREHLGGMAFDLRPIADALAERGRVVVRRAYADWSFFDEDRR 64
Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE---QSEGLEH 115
+ H L E + G R K++ D+++AVDA E + +
Sbjct: 65 MLTRSHVEL---------------IEMPQRMGASR-KNAADIKMAVDAVELAFERAYVST 108
Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVS 143
VI +GD FT LV L+ K+V V
Sbjct: 109 FVICTGDSDFTPLVHKLRELNKRVIGVG 136
>gi|302867482|ref|YP_003836119.1| hypothetical protein Micau_3012 [Micromonospora aurantiaca ATCC
27029]
gi|315506110|ref|YP_004084997.1| hypothetical protein ML5_5375 [Micromonospora sp. L5]
gi|302570341|gb|ADL46543.1| protein of unknown function DUF88 [Micromonospora aurantiaca ATCC
27029]
gi|315412729|gb|ADU10846.1| protein of unknown function DUF88 [Micromonospora sp. L5]
Length = 356
Score = 37.7 bits (86), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 66/153 (43%), Gaps = 31/153 (20%)
Query: 2 FDPREKIALFIDGANLYASSK--ALGFDIDYRKLLKAF--RSRAIVIRAYYYTTVVGDPE 57
D ++IALF+D NL + G D+R + A R R +V RAY
Sbjct: 1 MDHEDRIALFLDYENLALGVRDHHGGRPFDFRPIADALAERGRVVVRRAY---------- 50
Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAK----EFTENCGRKRVKSSMDVELAVDAFE---QS 110
DW +++ + + + E + G R K++ D+++AVDA E +
Sbjct: 51 ---------ADWSYFDEDRRMLTRSHVELIEIPQRMGASR-KNAADIKMAVDAVELAFER 100
Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS 143
+ VI +GD FT LV L+ K+V V
Sbjct: 101 GYISTFVICTGDSDFTPLVHKLRELNKRVIGVG 133
>gi|331005219|ref|ZP_08328612.1| hypothetical protein IMCC1989_1379 [gamma proteobacterium IMCC1989]
gi|330420962|gb|EGG95235.1| hypothetical protein IMCC1989_1379 [gamma proteobacterium IMCC1989]
Length = 170
Score = 37.7 bits (86), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 68/146 (46%), Gaps = 16/146 (10%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ-QF-S 61
R+KIA+F+D N+Y +++ +YR L + +++ ++ A Y GD +Q QF S
Sbjct: 11 RKKIAVFVDVQNIYYTTRDRYNKPFNYRHLWQRLQAQGDIVIANAYAIHRGDDKQLQFQS 70
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIF 119
L + GF + K + + K DV +A+D + S + +++
Sbjct: 71 ALKSI-------GFTMKLKPYIQRKDGSA----KGDWDVGIAIDVMDVAASGTADTIILL 119
Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTV 145
SGDG F L+ +++ T V V
Sbjct: 120 SGDGDFDLLLEKVKKDYHMTTEVYGV 145
>gi|46580394|ref|YP_011202.1| hypothetical protein DVU1985 [Desulfovibrio vulgaris str.
Hildenborough]
gi|120602234|ref|YP_966634.1| hypothetical protein Dvul_1187 [Desulfovibrio vulgaris DP4]
gi|46449811|gb|AAS96461.1| conserved domain protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|120562463|gb|ABM28207.1| conserved hypothetical protein [Desulfovibrio vulgaris DP4]
gi|311233631|gb|ADP86485.1| hypothetical protein Deval_1329 [Desulfovibrio vulgaris RCH1]
Length = 418
Score = 37.7 bits (86), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 95 KSSMDVEL---AVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS- 150
K+S D+ L +DA + + +I SGD FT L+ +Q ++ ++S + P+
Sbjct: 101 KTSADIHLVMDCMDALSHTTRFDEFIILSGDADFTPLLIRIQEHARRSLVLSVGYTSPAY 160
Query: 151 MASDQLRRQADYFMDLAYLKNEIARDPDE 179
A+ R + D+F+ A + DP E
Sbjct: 161 AAAASWRIREDWFVAQA-----VEEDPQE 184
>gi|293605834|ref|ZP_06688205.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
gi|292815747|gb|EFF74857.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
Length = 673
Score = 37.4 bits (85), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 75/186 (40%), Gaps = 29/186 (15%)
Query: 1 MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
M P E + ALF D N+ ALG D Y+K F R ++ R ++V
Sbjct: 10 MTTPNENVSMALFCDFENV-----ALGVRDTKYQK----FDIRPVLERLLLKGSIV---- 56
Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEH 115
DW Y F+ A E E R+ K+S D+ L VDA + H
Sbjct: 57 ----VKKAYCDWERYKEFKAPMHEANFELIEIPHVRQSGKNSADIRLVVDALDFCYTKSH 112
Query: 116 L---VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
+ VI SGD F+ LV+ L+ KKV V S SD L D F+ L E
Sbjct: 113 VNTFVIISGDSDFSPLVSKLRENNKKVIGVGVKQS----TSDLLIANCDEFIFYDDLARE 168
Query: 173 IARDPD 178
I R D
Sbjct: 169 IQRTAD 174
>gi|159899759|ref|YP_001546006.1| hypothetical protein Haur_3241 [Herpetosiphon aurantiacus ATCC
23779]
gi|159892798|gb|ABX05878.1| protein of unknown function DUF88 [Herpetosiphon aurantiacus ATCC
23779]
Length = 789
Score = 37.4 bits (85), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 75/182 (41%), Gaps = 42/182 (23%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDI--DYRKLLKAFR--SRAIVIRAYYYTTVVGDP 56
M P++ +A+FID N+Y S + FD ++ L++ R +V RAY
Sbjct: 29 MNKPKQDVAVFIDFENIYVSVRE-KFDATPNFEALMERCEDYGRVVVARAY--------- 78
Query: 57 EQQFSPLHPLLDWLHY---------NGFQVVAKVAKEFTENCGR--KRVKSSMDVELAVD 105
DW Y N + + + ++ GR + +K+S+D+ + +D
Sbjct: 79 ----------ADWYRYPRITSALFANNIEPMYVPTYYYDKDEGRMGRPIKNSVDMHMCID 128
Query: 106 AFE---QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162
A + + +GD F LV ++++ K V IV AS L + AD
Sbjct: 129 AMRTLYTRTNIGSYIFITGDRDFIALVNCVRQEGKDVIIVGIG----GAASSHLAQSADE 184
Query: 163 FM 164
F+
Sbjct: 185 FL 186
>gi|220907876|ref|YP_002483187.1| hypothetical protein Cyan7425_2469 [Cyanothece sp. PCC 7425]
gi|219864487|gb|ACL44826.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7425]
Length = 629
Score = 37.4 bits (85), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 15/96 (15%)
Query: 90 GRKRVKSSMDVELAVDAFEQSE---GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVL 146
R+R K++ D++L +DA + ++ VI SGDG F +L L KKV +
Sbjct: 106 SRERTKNAADIQLVIDAINLANLRPSIDTFVIVSGDGGFASLAKYLHECGKKVICCAY-- 163
Query: 147 SDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182
S AS + D F+++ +PD D++
Sbjct: 164 --KSSASKTFQSVCDGFVEIV--------EPDVDRR 189
>gi|257094026|ref|YP_003167667.1| hypothetical protein CAP2UW1_2449 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257046550|gb|ACV35738.1| protein of unknown function DUF88 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 460
Score = 37.4 bits (85), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 45/102 (44%), Gaps = 9/102 (8%)
Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122
DW Y GF+ A E E R+ K+S D+ L VDA + H+ VI SGD
Sbjct: 54 DWERYKGFKSTMHEASFELIEIPHLRQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGD 113
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F+ LV+ L+ K V V S SD L D F+
Sbjct: 114 SDFSPLVSKLRENAKYVIGVGVKQS----TSDLLIGNCDEFI 151
>gi|71908802|ref|YP_286389.1| hypothetical protein Daro_3189 [Dechloromonas aromatica RCB]
gi|71848423|gb|AAZ47919.1| Protein of unknown function DUF88 [Dechloromonas aromatica RCB]
Length = 421
Score = 37.4 bits (85), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 68/164 (41%), Gaps = 29/164 (17%)
Query: 8 IALFIDGANLYASSKALGFD-IDYRKLLKAFRSR-AIVIRAYYYTTVVGDPEQQFSPLHP 65
+ALF D N+ + ++ D R +L+ ++ +IV++ Y
Sbjct: 10 MALFCDFENIALGVRDAQYEKFDIRPVLERLLAKGSIVVKKAY----------------- 52
Query: 66 LLDWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFS 120
DW Y F+ A E E R+ K+S D+ + VDA + H+ VI S
Sbjct: 53 -CDWDRYKAFKAAMHEANFELIEIPHVRQSGKNSADIRMVVDALDLCYTKAHVDTFVIIS 111
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
GD F+ LV+ L+ K+V V S SD L D F+
Sbjct: 112 GDSDFSPLVSKLRENAKRVIGVGVKQS----CSDLLVTNCDEFI 151
>gi|82703323|ref|YP_412889.1| hypothetical protein Nmul_A2205 [Nitrosospira multiformis ATCC
25196]
gi|82411388|gb|ABB75497.1| Protein of unknown function DUF88 [Nitrosospira multiformis ATCC
25196]
Length = 381
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 49/113 (43%), Gaps = 9/113 (7%)
Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122
DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD
Sbjct: 54 DWDRYKTFKTALHEANFELIEIPHIRQSGKNSADIRLVVDALDLCYTKSHVNTFVIISGD 113
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
F+ LV+ L+ K+V V S SD L D F+ L EI R
Sbjct: 114 SDFSPLVSKLRENAKQVIGVGVKKS----TSDLLIANCDEFIFYDDLVREIQR 162
>gi|168703228|ref|ZP_02735505.1| hypothetical protein GobsU_27096 [Gemmata obscuriglobus UQM 2246]
Length = 532
Score = 37.0 bits (84), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 7/73 (9%)
Query: 95 KSSMDVELAVDAFEQSEGLEHL---VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151
K+S D+ L VDA + + +H+ VI SGD F+ LV+ L+ K V + LSD
Sbjct: 85 KNSADIRLVVDAIDLAYSKDHIDTFVIVSGDSDFSPLVSKLKELGKHV--IGLGLSD--A 140
Query: 152 ASDQLRRQADYFM 164
SD LR D F+
Sbjct: 141 TSDLLRDNCDEFI 153
>gi|218295524|ref|ZP_03496337.1| protein of unknown function DUF88 [Thermus aquaticus Y51MC23]
gi|218244156|gb|EED10682.1| protein of unknown function DUF88 [Thermus aquaticus Y51MC23]
Length = 179
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 67/142 (47%), Gaps = 10/142 (7%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLK-AFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+++ +F+D NLY S++ ++++ LL+ A R +V Y GD +
Sbjct: 10 QRVGVFVDTQNLYHSARDYYERNVNFESLLRFAVGGRRLVRATAYVVEKEGD-----TSA 64
Query: 64 HPLLDWLHYNGFQV--VAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
P + L G++V + KE T GR + + D+ +A D L+ +V+ SG
Sbjct: 65 WPFIYKLSTIGYRVRRMYLTVKE-TGEGGRPIYEGNWDMGIAADMVRLMPYLDVVVLGSG 123
Query: 122 DGCFTTLVAALQRKVKKVTIVS 143
DG F ++ L + +V +++
Sbjct: 124 DGDFVEILEVLMERGIRVEVIA 145
>gi|294495770|ref|YP_003542263.1| hypothetical protein Mmah_1111 [Methanohalophilus mahii DSM 5219]
gi|292666769|gb|ADE36618.1| protein of unknown function DUF88 [Methanohalophilus mahii DSM
5219]
Length = 206
Score = 36.6 bits (83), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 71/159 (44%), Gaps = 29/159 (18%)
Query: 7 KIALFIDGANL-------YASSKALGFDIDYRKLLKAFRSRAIV-------IRAYYYTTV 52
++ +FIDG NL + K + + K + + ++V IRA YYT +
Sbjct: 23 RMMVFIDGENLVFNYLSLLKNGKVPNDPVQHEKDVFVWHINSVVNPQFHEIIRANYYTYI 82
Query: 53 VGDPE------QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA 106
G E ++ + P L +N + VV K K+ ++ G +D+++ VD
Sbjct: 83 TGSDETIIDQIKKLAYARPPRSKLPHNLYPVVFKKPKKRAQSKG-------VDIQMTVDI 135
Query: 107 FEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS 143
Q + ++ + +F+GDG + ++ R K+V + +
Sbjct: 136 LSQVYNNNIDTVYLFAGDGDYLPVINEAIRMGKQVYLAA 174
>gi|288561663|ref|YP_003429069.1| hypothetical protein BpOF4_20909 [Bacillus pseudofirmus OF4]
gi|288548295|gb|ADC52177.1| hypothetical protein BpOF4_20909 [Bacillus pseudofirmus OF4]
Length = 191
Score = 36.6 bits (83), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 95 KSSMDVELAVDAFEQS-EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMAS 153
+ +DVELA+D ++++ EG E L++FSGD + LV A++R T V VL D A+
Sbjct: 97 EKGVDVELALDIYQKALEGYELLIVFSGD---SDLVPAIERAKALGTKVVAVLGDNQPAT 153
>gi|116671994|ref|YP_832927.1| hypothetical protein Arth_3452 [Arthrobacter sp. FB24]
gi|116612103|gb|ABK04827.1| protein of unknown function DUF88 [Arthrobacter sp. FB24]
Length = 282
Score = 36.6 bits (83), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 95 KSSMDVELAVDAFEQSEGL---EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151
K++ D+EL VDA E + + E V+ SGDG F L+ L K+ + +T +
Sbjct: 90 KNAADIELVVDALEVAADMPWIELFVVVSGDGDFVPLLRRLHALGKRSLVATTSQPKAGV 149
Query: 152 ASDQLRRQADYF 163
+ L+ AD+F
Sbjct: 150 VNKVLQSVADHF 161
>gi|320101761|ref|YP_004177352.1| hypothetical protein Isop_0206 [Isosphaera pallida ATCC 43644]
gi|319749043|gb|ADV60803.1| hypothetical protein Isop_0206 [Isosphaera pallida ATCC 43644]
Length = 493
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 15/95 (15%)
Query: 91 RKRVKSSMDVELAVDAFEQSE---GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLS 147
R K++ D+++A+DA + + GLE VI SGDG F+ L L K T++
Sbjct: 83 RDSRKNAADIQMAIDAIDLAHTRPGLEIFVIVSGDGGFSALARKLHEYGK--TVIGCAYQ 140
Query: 148 DPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182
S A+ R D F+ LA DP E+++
Sbjct: 141 --SAANRTFRAVCDEFVWLA--------DPIEEER 165
>gi|46199000|ref|YP_004667.1| hypothetical protein TTC0692 [Thermus thermophilus HB27]
gi|46196624|gb|AAS81040.1| hypothetical conserved protein [Thermus thermophilus HB27]
Length = 180
Score = 36.2 bits (82), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 66/142 (46%), Gaps = 10/142 (7%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLK-AFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+++ +F+D NLY S++ ++++ LL+ A R +V Y GD +
Sbjct: 11 QRVGVFVDTQNLYHSARDYYERNVNFESLLRFAVGGRRLVRATAYVVEKEGD-----TSA 65
Query: 64 HPLLDWLHYNGFQV--VAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
P + L G++V + KE T GR + D+ +A D L+ +V+ SG
Sbjct: 66 WPFIYKLSTIGYKVRRMYLTVKE-TGEGGRPIYSGNWDMGIAADMVRLMPYLDVVVLGSG 124
Query: 122 DGCFTTLVAALQRKVKKVTIVS 143
DG F ++ L + +V +++
Sbjct: 125 DGDFVEILEVLMERGIRVEVIA 146
>gi|88810791|ref|ZP_01126048.1| hypothetical protein NB231_16963 [Nitrococcus mobilis Nb-231]
gi|88792421|gb|EAR23531.1| hypothetical protein NB231_16963 [Nitrococcus mobilis Nb-231]
Length = 196
Score = 36.2 bits (82), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 74/188 (39%), Gaps = 31/188 (16%)
Query: 11 FIDGANLYASS-KALG--FDIDYRKLLKAFRSR-AIVIRAYYYTTVVGDPEQQFSPLHPL 66
IDG+ ++A++ + G +DY +L + ++ R YY +V D H
Sbjct: 6 LIDGSYIHANNIQRFGPHTRVDYLRLRRLIEEHLGVLWRGYYLNSVQSDAHSARERFHSW 65
Query: 67 LDWLHYNGFQVVAK--------VAKEFTENCGRK----------------RVKSSMDVEL 102
L NG ++ K V F +CG K + + +DV L
Sbjct: 66 LQSAAPNGPHLIVKLYGLKNERVENAFCVDCGTKIEVCCPHGGPDHHLVNQRQMGVDVGL 125
Query: 103 AVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIV---STVLSDPSMASDQLRRQ 159
A A E + LV+ SGDG V L K++ + + V +D +D++
Sbjct: 126 ATLALAHKERYDCLVLSSGDGDLLDAVEHLCENGKRIELAVFSTGVSTDLQARADRVLWI 185
Query: 160 ADYFMDLA 167
D+ +LA
Sbjct: 186 DDHMDELA 193
>gi|55981026|ref|YP_144323.1| hypothetical protein TTHA1057 [Thermus thermophilus HB8]
gi|55772439|dbj|BAD70880.1| conserved hypothetical protein [Thermus thermophilus HB8]
Length = 180
Score = 36.2 bits (82), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 66/142 (46%), Gaps = 10/142 (7%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLK-AFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+++ +F+D NLY S++ ++++ LL+ A R +V Y GD +
Sbjct: 11 QRVGVFVDTQNLYHSARDYYERNVNFESLLRFAVGGRRLVRATAYVVEKEGD-----TSA 65
Query: 64 HPLLDWLHYNGFQV--VAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
P + L G++V + KE T GR + D+ +A D L+ +V+ SG
Sbjct: 66 WPFIYKLSTIGYKVRRMYLTVKE-TGEGGRPIYSGNWDMGIAADMVRLMPYLDVVVLGSG 124
Query: 122 DGCFTTLVAALQRKVKKVTIVS 143
DG F ++ L + +V +++
Sbjct: 125 DGDFVEILEVLMERGIRVEVIA 146
>gi|217970117|ref|YP_002355351.1| hypothetical protein Tmz1t_1700 [Thauera sp. MZ1T]
gi|217507444|gb|ACK54455.1| protein of unknown function DUF88 [Thauera sp. MZ1T]
Length = 564
Score = 36.2 bits (82), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 9/102 (8%)
Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122
DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD
Sbjct: 54 DWDRYKSFKAAMHEANFELIEIPHVRQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGD 113
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F+ LV+ L+ K+V V S SD L D F+
Sbjct: 114 SDFSPLVSKLRENAKQVIGVGVKQS----TSDLLIANCDEFI 151
>gi|331700009|ref|YP_004336248.1| hypothetical protein Psed_6296 [Pseudonocardia dioxanivorans
CB1190]
gi|326954698|gb|AEA28395.1| Domain of unknown function DUF88 [Pseudonocardia dioxanivorans
CB1190]
Length = 367
Score = 36.2 bits (82), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 67/155 (43%), Gaps = 31/155 (20%)
Query: 1 MFDPREKIALFIDGANL-YASSKALGFD-IDYRKLLKAF--RSRAIVIRAYYYTTVVGDP 56
M E+IALF+D NL + + LG D+ + A R R + RAY
Sbjct: 1 MISDDERIALFLDYENLAIGAREGLGVSPFDFGPIADALAERGRVVARRAYA-------- 52
Query: 57 EQQFSPLHPLLDWLHY-NGFQVVAKVAKEFTE---NCGRKRVKSSMDVELAVDAFE---Q 109
DW ++ + +++A+ E E G R K++ D++LAVDA E +
Sbjct: 53 -----------DWSYFDDDRRLLARAQVELIEIPQRLGGSR-KNAADIKLAVDAIELAYE 100
Query: 110 SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVST 144
+ I +GD FT LV L+ K+V +
Sbjct: 101 RGFVTTFAIGTGDSDFTPLVHKLREMDKRVIGIGV 135
>gi|134282577|ref|ZP_01769281.1| conserved hypothetical protein [Burkholderia pseudomallei 305]
gi|134246134|gb|EBA46224.1| conserved hypothetical protein [Burkholderia pseudomallei 305]
Length = 622
Score = 35.8 bits (81), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
Query: 67 LDWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSG 121
DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SG
Sbjct: 196 CDWDRYKTFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKAHVDTFVIISG 255
Query: 122 DGCFTTLVAALQRKVKKVTIV 142
D F+ LV+ L+ K+V V
Sbjct: 256 DSDFSPLVSKLRENAKRVIGV 276
>gi|320103701|ref|YP_004179292.1| hypothetical protein Isop_2164 [Isosphaera pallida ATCC 43644]
gi|319750983|gb|ADV62743.1| hypothetical protein Isop_2164 [Isosphaera pallida ATCC 43644]
Length = 294
Score = 35.8 bits (81), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 71/167 (42%), Gaps = 35/167 (20%)
Query: 8 IALFIDGANL---YASSKALGFDIDYRKLLKAF--RSRAIVIRAYYYTTVVGDPEQQFSP 62
+A+F+D NL + + K F+I K+L+ + + IV +AY
Sbjct: 10 LAVFVDLENLAMGFQNQKKARFEI--HKVLERLVEKGKLIVKKAY--------------- 52
Query: 63 LHPLLDWLHYNGFQV-VAKVAKEFTENCGRKRV-KSSMDVELAVDAFEQSEGLEHL---V 117
DW Y + + A E E R + K+S D+ L VDA + + H+ V
Sbjct: 53 ----ADWNRYQAYTAPFHEAAIELIEIPRRSQTGKNSADIRLVVDAMDLAWSKPHVDTFV 108
Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
I SGD F+ LV+ L+ K V + S S+ LR D F+
Sbjct: 109 IVSGDSDFSPLVSKLKENGKHVIGLGMKGS----TSELLRDNCDEFI 151
>gi|83717296|ref|YP_439296.1| hypothetical protein BTH_II1099 [Burkholderia thailandensis E264]
gi|83651121|gb|ABC35185.1| Protein of unknown function family [Burkholderia thailandensis
E264]
Length = 472
Score = 35.8 bits (81), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 9/102 (8%)
Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122
DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD
Sbjct: 54 DWDRYKTFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGD 113
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F+ LV+ L+ K+V V S SD L D F+
Sbjct: 114 SDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFI 151
>gi|167839964|ref|ZP_02466648.1| hypothetical protein Bpse38_25044 [Burkholderia thailandensis
MSMB43]
Length = 445
Score = 35.8 bits (81), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 69/170 (40%), Gaps = 32/170 (18%)
Query: 8 IALFIDGANLYASSKALGFD-IDYRKLL-KAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
+ALF D N+ + F+ D R +L K +IV++ Y
Sbjct: 1 MALFCDFENIALGVRDTKFEKFDIRPVLEKLLLKGSIVVKKAY----------------- 43
Query: 66 LLDWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFS 120
DW Y F+ A E E R+ K+S D+ L VDA + H+ VI S
Sbjct: 44 -CDWDRYKTFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKAHVDTFVIIS 102
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM---DLA 167
GD F+ LV+ L+ K+V V S SD L D F+ DLA
Sbjct: 103 GDSDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLA 148
>gi|167820046|ref|ZP_02451726.1| hypothetical protein Bpse9_33267 [Burkholderia pseudomallei 91]
Length = 460
Score = 35.8 bits (81), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 9/102 (8%)
Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122
DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD
Sbjct: 45 DWDRYKTFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGD 104
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F+ LV+ L+ K+V V S SD L D F+
Sbjct: 105 SDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFI 142
>gi|126456340|ref|YP_001075832.1| hypothetical protein BURPS1106A_A1798 [Burkholderia pseudomallei
1106a]
gi|242312308|ref|ZP_04811325.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b]
gi|126230108|gb|ABN93521.1| conserved hypothetical protein [Burkholderia pseudomallei 1106a]
gi|242135547|gb|EES21950.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b]
Length = 483
Score = 35.8 bits (81), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 9/102 (8%)
Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122
DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD
Sbjct: 54 DWDRYKTFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGD 113
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F+ LV+ L+ K+V V S SD L D F+
Sbjct: 114 SDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFI 151
>gi|53722351|ref|YP_111336.1| hypothetical protein BPSS1326 [Burkholderia pseudomallei K96243]
gi|52212765|emb|CAH38797.1| conserved hypothetical protein [Burkholderia pseudomallei K96243]
Length = 483
Score = 35.8 bits (81), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 9/102 (8%)
Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122
DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD
Sbjct: 54 DWDRYKTFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGD 113
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F+ LV+ L+ K+V V S SD L D F+
Sbjct: 114 SDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFI 151
>gi|167577696|ref|ZP_02370570.1| hypothetical protein BthaT_06146 [Burkholderia thailandensis TXDOH]
Length = 463
Score = 35.8 bits (81), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 9/102 (8%)
Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122
DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD
Sbjct: 45 DWDRYKTFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGD 104
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F+ LV+ L+ K+V V S SD L D F+
Sbjct: 105 SDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFI 142
>gi|217418449|ref|ZP_03449956.1| conserved hypothetical protein [Burkholderia pseudomallei 576]
gi|217397753|gb|EEC37768.1| conserved hypothetical protein [Burkholderia pseudomallei 576]
Length = 500
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 9/102 (8%)
Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122
DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD
Sbjct: 71 DWDRYKTFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGD 130
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F+ LV+ L+ K+V V S SD L D F+
Sbjct: 131 SDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFI 168
>gi|167898481|ref|ZP_02485882.1| hypothetical protein Bpse7_32411 [Burkholderia pseudomallei 7894]
Length = 456
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 9/102 (8%)
Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122
DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD
Sbjct: 45 DWDRYKTFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGD 104
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F+ LV+ L+ K+V V S SD L D F+
Sbjct: 105 SDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFI 142
>gi|167615822|ref|ZP_02384457.1| hypothetical protein BthaB_05981 [Burkholderia thailandensis Bt4]
gi|257142413|ref|ZP_05590675.1| hypothetical protein BthaA_24818 [Burkholderia thailandensis E264]
Length = 463
Score = 35.4 bits (80), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 9/102 (8%)
Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122
DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD
Sbjct: 45 DWDRYKTFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGD 104
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F+ LV+ L+ K+V V S SD L D F+
Sbjct: 105 SDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFI 142
>gi|254174034|ref|ZP_04880697.1| protein of unknown function [Burkholderia mallei ATCC 10399]
gi|254356680|ref|ZP_04972955.1| protein of unknown function [Burkholderia mallei 2002721280]
gi|148025707|gb|EDK83830.1| protein of unknown function [Burkholderia mallei 2002721280]
gi|160695081|gb|EDP85051.1| protein of unknown function [Burkholderia mallei ATCC 10399]
Length = 477
Score = 35.4 bits (80), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 9/102 (8%)
Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122
DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD
Sbjct: 45 DWDRYKTFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGD 104
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F+ LV+ L+ K+V V S SD L D F+
Sbjct: 105 SDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFI 142
>gi|167923021|ref|ZP_02510112.1| hypothetical protein BpseBC_30982 [Burkholderia pseudomallei
BCC215]
Length = 477
Score = 35.4 bits (80), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 9/102 (8%)
Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122
DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD
Sbjct: 45 DWDRYKTFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGD 104
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F+ LV+ L+ K+V V S SD L D F+
Sbjct: 105 SDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFI 142
>gi|226198540|ref|ZP_03794107.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan
9]
gi|225929463|gb|EEH25483.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan
9]
Length = 486
Score = 35.4 bits (80), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 9/102 (8%)
Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122
DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD
Sbjct: 54 DWDRYKTFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGD 113
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F+ LV+ L+ K+V V S SD L D F+
Sbjct: 114 SDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFI 151
>gi|126442572|ref|YP_001062878.1| hypothetical protein BURPS668_A1883 [Burkholderia pseudomallei 668]
gi|126222063|gb|ABN85568.1| conserved hypothetical protein [Burkholderia pseudomallei 668]
Length = 477
Score = 35.4 bits (80), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 9/102 (8%)
Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122
DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD
Sbjct: 45 DWDRYKTFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGD 104
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F+ LV+ L+ K+V V S SD L D F+
Sbjct: 105 SDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFI 142
>gi|167828427|ref|ZP_02459898.1| hypothetical protein Bpseu9_32389 [Burkholderia pseudomallei 9]
Length = 469
Score = 35.4 bits (80), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 9/102 (8%)
Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122
DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD
Sbjct: 45 DWDRYKTFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGD 104
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F+ LV+ L+ K+V V S SD L D F+
Sbjct: 105 SDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFI 142
>gi|167723901|ref|ZP_02407137.1| hypothetical protein BpseD_33095 [Burkholderia pseudomallei DM98]
Length = 474
Score = 35.4 bits (80), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 9/102 (8%)
Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122
DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD
Sbjct: 45 DWDRYKTFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGD 104
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F+ LV+ L+ K+V V S SD L D F+
Sbjct: 105 SDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFI 142
>gi|167629267|ref|YP_001679766.1| hypothetical protein HM1_0800 [Heliobacterium modesticaldum Ice1]
gi|167592007|gb|ABZ83755.1| hypothetical protein HM1_0800 [Heliobacterium modesticaldum Ice1]
Length = 214
Score = 35.4 bits (80), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 70/177 (39%), Gaps = 30/177 (16%)
Query: 6 EKIALFIDGANL-------YASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTV------ 52
+K A+FIDG L + S + +DY KL K + R YYY +
Sbjct: 21 DKCAIFIDGGYLDKVFQDEFGSPR-----VDYLKLSKWLSRGTSIFRTYYYNCLPYQSNP 75
Query: 53 -VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCG-------RKRVKSSMDVELAV 104
+ Q+FS L V EF N +KRV + V+LA+
Sbjct: 76 PTTEESQRFSKKQAFYGRLKQLERYEVRLGKLEFRGNRQDGTPIFVQKRVDILLGVDLAL 135
Query: 105 DAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
A + + H IF+GD F ++ + + +T+ S+P D L R+AD
Sbjct: 136 LAAKNR--ITHATIFAGDSDFLPAISVAKNEGVLITLAHGGASNP--PHDDLWREAD 188
>gi|254417374|ref|ZP_05031116.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
gi|196175809|gb|EDX70831.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
Length = 99
Score = 35.4 bits (80), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 4/69 (5%)
Query: 98 MDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLR 157
+DVELA+D E ++ + ++ SGDG F + +Q+ ++V +VS + S +L
Sbjct: 25 LDVELALDLVELADTYDTAILVSGDGDFVPAIERIQQLSRRVEVVSY----RATTSQKLM 80
Query: 158 RQADYFMDL 166
+ AD +++L
Sbjct: 81 QLADNYLNL 89
>gi|167915186|ref|ZP_02502277.1| hypothetical protein Bpse112_32216 [Burkholderia pseudomallei 112]
Length = 474
Score = 35.4 bits (80), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 9/102 (8%)
Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122
DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD
Sbjct: 45 DWDRYKTFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGD 104
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F+ LV+ L+ K+V V S SD L D F+
Sbjct: 105 SDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFI 142
>gi|76819463|ref|YP_335506.1| hypothetical protein BURPS1710b_A0347 [Burkholderia pseudomallei
1710b]
gi|254262408|ref|ZP_04953273.1| conserved hypothetical protein [Burkholderia pseudomallei 1710a]
gi|76583936|gb|ABA53410.1| Protein of unknown function family [Burkholderia pseudomallei
1710b]
gi|254213410|gb|EET02795.1| conserved hypothetical protein [Burkholderia pseudomallei 1710a]
Length = 483
Score = 35.4 bits (80), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 9/102 (8%)
Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122
DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD
Sbjct: 54 DWDRYKTFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGD 113
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F+ LV+ L+ K+V V S SD L D F+
Sbjct: 114 SDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFI 151
>gi|237509073|ref|ZP_04521788.1| conserved hypothetical protein [Burkholderia pseudomallei MSHR346]
gi|235001278|gb|EEP50702.1| conserved hypothetical protein [Burkholderia pseudomallei MSHR346]
Length = 480
Score = 35.4 bits (80), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 9/102 (8%)
Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122
DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD
Sbjct: 54 DWDRYKTFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGD 113
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F+ LV+ L+ K+V V S SD L D F+
Sbjct: 114 SDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFI 151
>gi|167906832|ref|ZP_02494037.1| hypothetical protein BpseN_31680 [Burkholderia pseudomallei NCTC
13177]
Length = 470
Score = 35.4 bits (80), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 9/102 (8%)
Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122
DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD
Sbjct: 45 DWDRYKTFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGD 104
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F+ LV+ L+ K+V V S SD L D F+
Sbjct: 105 SDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFI 142
>gi|167849880|ref|ZP_02475388.1| hypothetical protein BpseB_31835 [Burkholderia pseudomallei B7210]
Length = 474
Score = 35.4 bits (80), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 9/102 (8%)
Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122
DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD
Sbjct: 45 DWDRYKTFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGD 104
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F+ LV+ L+ K+V V S SD L D F+
Sbjct: 105 SDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFI 142
>gi|254183703|ref|ZP_04890295.1| conserved hypothetical protein [Burkholderia pseudomallei 1655]
gi|184214236|gb|EDU11279.1| conserved hypothetical protein [Burkholderia pseudomallei 1655]
Length = 474
Score = 35.4 bits (80), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 9/102 (8%)
Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122
DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD
Sbjct: 45 DWDRYKTFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGD 104
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F+ LV+ L+ K+V V S SD L D F+
Sbjct: 105 SDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFI 142
>gi|311106775|ref|YP_003979628.1| hypothetical protein AXYL_03593 [Achromobacter xylosoxidans A8]
gi|310761464|gb|ADP16913.1| hypothetical protein AXYL_03593 [Achromobacter xylosoxidans A8]
Length = 576
Score = 35.4 bits (80), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 73/178 (41%), Gaps = 32/178 (17%)
Query: 1 MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
M P E + ALF D N+ ALG D Y+K F R ++ R ++V
Sbjct: 1 MNTPNENVSMALFCDFENV-----ALGVRDTKYQK----FDIRPVLERLLLKGSIVVK-- 49
Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEH 115
DW Y F+ A E E R+ K+S D+ L VDA + H
Sbjct: 50 ------KAYCDWERYKEFKAPMHEANFELIEIPHVRQSGKNSADIRLVVDALDFCYTKSH 103
Query: 116 L---VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM---DLA 167
+ VI SGD F+ LV+ L+ KKV V S SD L D F+ DLA
Sbjct: 104 VNTFVIISGDSDFSPLVSKLRENNKKVIGVGVKQS----TSDLLIANCDEFIFYDDLA 157
>gi|257784783|ref|YP_003180000.1| hypothetical protein Apar_0980 [Atopobium parvulum DSM 20469]
gi|257473290|gb|ACV51409.1| protein of unknown function DUF88 [Atopobium parvulum DSM 20469]
Length = 260
Score = 35.4 bits (80), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 68 DWLHY-NGFQVVAKVAKEFTENCGRKRV-KSSMDVELAVDAFEQSEGLEHL---VIFSGD 122
DW + N + ++ E E R K+S D+ LAVDA E +H+ + SGD
Sbjct: 62 DWQRFPNAITPLHELGIELIEIPDRAYTGKNSADIRLAVDAVEMCLTKDHIDTFAVLSGD 121
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASD 154
F+ LVA L+ K V V S S+ ++
Sbjct: 122 SDFSPLVAKLKEAGKTVIGVGMKESTSSLLAE 153
>gi|300123317|emb|CBK24590.2| unnamed protein product [Blastocystis hominis]
Length = 1738
Score = 35.4 bits (80), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 62/136 (45%), Gaps = 16/136 (11%)
Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGD--PEQQ 59
FD + KIA + A LY S+ +L D+D +K +I+ + +G+ EQ
Sbjct: 579 FD-KPKIAELCERAGLYQSALSLYTDLD---AIKRVVVNTHMIKPEFLVQYIGELPAEQA 634
Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119
L L+ + N ++V +VA+++++N G VE + FE+ E L F
Sbjct: 635 IEVLRTLMSYNSSN-VRLVVQVAQKYSQNIG---------VEPLIALFEEFSSTEGLFYF 684
Query: 120 SGDGCFTTLVAALQRK 135
G FT+ +Q K
Sbjct: 685 LGAIAFTSTDGNVQLK 700
>gi|167742874|ref|ZP_02415648.1| hypothetical protein Bpse14_32667 [Burkholderia pseudomallei 14]
gi|254191183|ref|ZP_04897688.1| conserved hypothetical protein [Burkholderia pseudomallei Pasteur
52237]
gi|157938856|gb|EDO94526.1| conserved hypothetical protein [Burkholderia pseudomallei Pasteur
52237]
Length = 474
Score = 35.4 bits (80), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 9/102 (8%)
Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122
DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD
Sbjct: 45 DWDRYKTFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGD 104
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F+ LV+ L+ K+V V S SD L D F+
Sbjct: 105 SDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFI 142
>gi|302336205|ref|YP_003801412.1| protein of unknown function DUF88 [Olsenella uli DSM 7084]
gi|301320045|gb|ADK68532.1| protein of unknown function DUF88 [Olsenella uli DSM 7084]
Length = 258
Score = 35.0 bits (79), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 70 LHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGDGCFT 126
LH G +++ + FT K+S D+ LAVDA E +H+ I SGD F+
Sbjct: 71 LHELGIELIEIPDRAFTG-------KNSADIRLAVDAMEMCLTKDHIDTFAILSGDSDFS 123
Query: 127 TLVAALQRKVKKVTIVS 143
LVA L+ K V V
Sbjct: 124 PLVAKLKEFGKTVIGVG 140
>gi|229541784|ref|ZP_04430844.1| protein of unknown function DUF88 [Bacillus coagulans 36D1]
gi|229326204|gb|EEN91879.1| protein of unknown function DUF88 [Bacillus coagulans 36D1]
Length = 179
Score = 35.0 bits (79), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 11/128 (8%)
Query: 6 EKIALFIDGANLYASSKALGFD---IDYRKLLK--AFRSRAIVIRAYYYTTVVGDPEQQF 60
+++ +FIDG N A+ AL +DY KL + A R I+ R YYYT V +++
Sbjct: 2 KRVMVFIDGNNFEAALTALYGSQQRLDYLKLAEYVAARRDGILQRIYYYTAVGSLDKEKA 61
Query: 61 SPLHPLLDWLHYNGFQVVAKVA--KEFTENCGRKRV--KSSMDVELAVD--AFEQSEGLE 114
+ +D L+ + +AK+ N K + + DV +AVD + + G +
Sbjct: 62 AATKLFIDHLNKKVPKCIAKLGYLSVVGINALGKPIFTEKGTDVNIAVDLVSLAFNNGYD 121
Query: 115 HLVIFSGD 122
++FS D
Sbjct: 122 EAILFSAD 129
>gi|154250322|ref|YP_001411147.1| hypothetical protein Fnod_1655 [Fervidobacterium nodosum Rt17-B1]
gi|154154258|gb|ABS61490.1| protein of unknown function DUF88 [Fervidobacterium nodosum
Rt17-B1]
Length = 432
Score = 35.0 bits (79), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 56/134 (41%), Gaps = 15/134 (11%)
Query: 49 YTTVVGDPEQQFSPLHPLLDWLHYN-GFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAF 107
Y +VG H + ++ YN G +++ EF N K D+ LAVD
Sbjct: 34 YGRIVGGKAYGSWSKHKMPSFVLYNYGIELIEIPEAEFLPN------KKGNDIRLAVDCV 87
Query: 108 E---QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
E + ++ + +GD FT LV L+ KKV L+ AS +L D F+
Sbjct: 88 EIALHNNVIDTFFLVTGDADFTALVYKLKSYGKKV----IALARTKSASYELVSAVDLFI 143
Query: 165 DLA-YLKNEIARDP 177
+KNE DP
Sbjct: 144 PYEDIVKNEKLADP 157
>gi|330820543|ref|YP_004349405.1| hypothetical protein bgla_2g14470 [Burkholderia gladioli BSR3]
gi|327372538|gb|AEA63893.1| hypothetical protein bgla_2g14470 [Burkholderia gladioli BSR3]
Length = 525
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 49/113 (43%), Gaps = 9/113 (7%)
Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122
DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD
Sbjct: 54 DWDRYKTFKGAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGD 113
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
F+ LV+ L+ K+V V S SD L D F+ L E+ R
Sbjct: 114 SDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLARELQR 162
>gi|329906041|ref|ZP_08274342.1| hypothetical protein IMCC9480_2751 [Oxalobacteraceae bacterium
IMCC9480]
gi|327547373|gb|EGF32203.1| hypothetical protein IMCC9480_2751 [Oxalobacteraceae bacterium
IMCC9480]
Length = 284
Score = 34.7 bits (78), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 70/167 (41%), Gaps = 35/167 (20%)
Query: 8 IALFIDGANL---YASSKALGFDIDYRKLLKAF--RSRAIVIRAYYYTTVVGDPEQQFSP 62
+ALF D N+ +K FDI RK+L+ + +V +AY
Sbjct: 10 MALFCDFENVALGVRDAKYAAFDI--RKVLERLLLKGNIVVKKAY--------------- 52
Query: 63 LHPLLDWLHYNGFQV-VAKVAKEFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---V 117
DW Y F+ + + A E E R+ K+S D+ + VDA + H+ V
Sbjct: 53 ----CDWDRYKDFKAAMHEAAFELIEIPHVRQSGKNSADIRMVVDALDLCYTKAHVDTFV 108
Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
I SGD F+ LV+ L+ K+V V S SD L D F+
Sbjct: 109 ILSGDSDFSPLVSKLRENNKRVIGVGVKDS----TSDLLSANCDEFI 151
>gi|317407351|gb|EFV87317.1| hypothetical protein HMPREF0005_05421 [Achromobacter xylosoxidans
C54]
Length = 170
Score = 34.7 bits (78), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 45/102 (44%), Gaps = 9/102 (8%)
Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122
DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD
Sbjct: 54 DWERYKEFKAPMHEANFELIEIPHVRQSGKNSADIRLVVDALDFCYTKSHVNTFVIISGD 113
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F+ LV+ L+ KKV V S SD L D F+
Sbjct: 114 SDFSPLVSKLRENDKKVIGVGVKQS----TSDLLIANCDEFI 151
>gi|149239965|ref|XP_001525858.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449981|gb|EDK44237.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 321
Score = 34.7 bits (78), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 10/96 (10%)
Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVI 118
SP+ LL W + GF V+ K TEN KR+K ++D+ +A ++++GLE V
Sbjct: 233 NISPIELLLKWSYLQGFIVLVK-----TENP--KRIKENLDI--LPEAVKENDGLEETVR 283
Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASD 154
L+ AL + K +++ DP++ D
Sbjct: 284 LGKIDLDVDLLEALNKPDSK-EVLTWGGVDPTLYKD 318
>gi|167566002|ref|ZP_02358918.1| hypothetical protein BoklE_25814 [Burkholderia oklahomensis EO147]
Length = 524
Score = 34.7 bits (78), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 45/103 (43%), Gaps = 9/103 (8%)
Query: 67 LDWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSG 121
DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SG
Sbjct: 44 CDWDRYKTFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKAHVDTFVIISG 103
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
D F+ LV+ L+ K+V V S SD L D F+
Sbjct: 104 DSDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFI 142
>gi|187925165|ref|YP_001896807.1| hypothetical protein Bphyt_3191 [Burkholderia phytofirmans PsJN]
gi|187716359|gb|ACD17583.1| protein of unknown function DUF88 [Burkholderia phytofirmans PsJN]
Length = 478
Score = 34.7 bits (78), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122
DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD
Sbjct: 54 DWDRYKSFKGAMHEANFELIEIPHVRQSGKNSADIRLVVDALDLCYTKSHVNTFVIISGD 113
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLS 147
F+ LV+ L+ K+V V S
Sbjct: 114 SDFSPLVSKLRENAKQVIGVGVQQS 138
>gi|153004596|ref|YP_001378921.1| hypothetical protein Anae109_1734 [Anaeromyxobacter sp. Fw109-5]
gi|152028169|gb|ABS25937.1| protein of unknown function DUF88 [Anaeromyxobacter sp. Fw109-5]
Length = 249
Score = 34.7 bits (78), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 57/139 (41%), Gaps = 22/139 (15%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVI--RAYYYTTVVGDPEQQFSPL 63
++IALFID NL + D + L A + V+ RAY T + Q+
Sbjct: 9 QRIALFIDFENLVTRTGLSAETFDLQPALDALLEKGKVVFRRAYADWTRFAEATQR---- 64
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHL---VIFS 120
LH G ++V + G K+ DV L +DA E + EH+ VI S
Sbjct: 65 ------LHDKGVELVDVPP---STRAG----KNGADVRLVIDALELAYLREHIDTFVIAS 111
Query: 121 GDGCFTTLVAALQRKVKKV 139
GD F L L+ + V
Sbjct: 112 GDSDFCPLAYKLRENDRNV 130
>gi|238024602|ref|YP_002908834.1| hypothetical protein bglu_2g12170 [Burkholderia glumae BGR1]
gi|237879267|gb|ACR31599.1| Hypothetical protein bglu_2g12170 [Burkholderia glumae BGR1]
Length = 538
Score = 34.7 bits (78), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 9/102 (8%)
Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122
DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD
Sbjct: 54 DWDRYKTFKGAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGD 113
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F+ LV+ L+ K+V V S SD L D F+
Sbjct: 114 SDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFI 151
>gi|167573079|ref|ZP_02365953.1| hypothetical protein BoklC_24798 [Burkholderia oklahomensis C6786]
Length = 468
Score = 34.7 bits (78), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 9/102 (8%)
Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122
DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD
Sbjct: 45 DWDRYKTFKAAMHEASFELIEIPHVRQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGD 104
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F+ LV+ L+ K+V V S SD L D F+
Sbjct: 105 SDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFI 142
>gi|91785005|ref|YP_560211.1| hypothetical protein Bxe_A0775 [Burkholderia xenovorans LB400]
gi|91688959|gb|ABE32159.1| Conserved hypothetical protein [Burkholderia xenovorans LB400]
Length = 480
Score = 34.3 bits (77), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122
DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD
Sbjct: 54 DWDRYKSFKGAMHEANFELIEIPHVRQSGKNSADIRLVVDALDLCYTKSHVNTFVIISGD 113
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLS 147
F+ LV+ L+ K+V V S
Sbjct: 114 SDFSPLVSKLRENAKQVIGVGVQQS 138
>gi|301109108|ref|XP_002903635.1| sterol 3-beta-glucosyltransferase, putative [Phytophthora infestans
T30-4]
gi|262097359|gb|EEY55411.1| sterol 3-beta-glucosyltransferase, putative [Phytophthora infestans
T30-4]
Length = 1401
Score = 34.3 bits (77), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIV---IRAYYYTTVVGDPEQ 58
F+P + + +D + +A+ D+D RKL + F S+ I+ + AY V D +
Sbjct: 1216 FEPERAVNVAVDSFYSHLPLEAMVCDVDPRKLARVFDSQHIMKLSLEAYLAVEPVRDESK 1275
Query: 59 QFSPLHPLLDWLHYNGFQ 76
F P P L Y+GF+
Sbjct: 1276 GFVPYKP----LQYDGFR 1289
>gi|296157195|ref|ZP_06840031.1| protein of unknown function DUF88 [Burkholderia sp. Ch1-1]
gi|295892531|gb|EFG72313.1| protein of unknown function DUF88 [Burkholderia sp. Ch1-1]
Length = 479
Score = 34.3 bits (77), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122
DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD
Sbjct: 54 DWDRYKSFKGAMHEANFELIEIPHVRQSGKNSADIRLVVDALDLCYTKSHVNTFVIISGD 113
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLS 147
F+ LV+ L+ K+V V S
Sbjct: 114 SDFSPLVSKLRENAKQVIGVGVQQS 138
>gi|307730797|ref|YP_003908021.1| hypothetical protein BC1003_2777 [Burkholderia sp. CCGE1003]
gi|307585332|gb|ADN58730.1| protein of unknown function DUF88 [Burkholderia sp. CCGE1003]
Length = 562
Score = 34.3 bits (77), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122
DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD
Sbjct: 54 DWDRYKSFKGAMHEANFELIEIPHVRQSGKNSADIRLVVDALDLCYTKSHVNTFVIISGD 113
Query: 123 GCFTTLVAALQRKVKKVTIV 142
F+ LV+ L+ K+V V
Sbjct: 114 SDFSPLVSKLRENAKQVIGV 133
>gi|323527162|ref|YP_004229315.1| hypothetical protein BC1001_2841 [Burkholderia sp. CCGE1001]
gi|323384164|gb|ADX56255.1| hypothetical protein BC1001_2841 [Burkholderia sp. CCGE1001]
Length = 534
Score = 34.3 bits (77), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122
DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD
Sbjct: 54 DWDRYKSFKGAMHEANFELIEIPHVRQSGKNSADIRLVVDALDLCYTKSHVNTFVIISGD 113
Query: 123 GCFTTLVAALQRKVKKVTIV 142
F+ LV+ L+ K+V V
Sbjct: 114 SDFSPLVSKLRENAKQVIGV 133
>gi|116672106|ref|YP_833039.1| hypothetical protein Arth_3564 [Arthrobacter sp. FB24]
gi|116612215|gb|ABK04939.1| hypothetical protein Arth_3564 [Arthrobacter sp. FB24]
Length = 415
Score = 33.9 bits (76), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 92 KRVKSSMDVEL---AVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS 143
+R KSS D+ L A+DA S G++ I S D FT+L+ + K T+++
Sbjct: 96 QRGKSSTDINLVLDAMDALSGSAGIDEFFIASADADFTSLIQRFRAADKMTTVIA 150
>gi|303232840|ref|ZP_07319524.1| conserved hypothetical protein [Atopobium vaginae PB189-T1-4]
gi|302481030|gb|EFL44106.1| conserved hypothetical protein [Atopobium vaginae PB189-T1-4]
Length = 260
Score = 33.9 bits (76), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 95 KSSMDVELAVDAFEQSEGLEHL---VIFSGDGCFTTLVAALQRKVKKV 139
K+S D+ LAVDA E EH+ I SGD F+ LVA L+ K V
Sbjct: 90 KNSADIRLAVDATEMCLTKEHIDTFAILSGDSDFSPLVAKLKEFGKTV 137
>gi|295677487|ref|YP_003606011.1| protein of unknown function DUF88 [Burkholderia sp. CCGE1002]
gi|295437330|gb|ADG16500.1| protein of unknown function DUF88 [Burkholderia sp. CCGE1002]
Length = 515
Score = 33.9 bits (76), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
Query: 68 DWLHYNGFQVVAKVAK-EFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHL---VIFSGD 122
DW Y F+ A E E R+ K+S D+ L VDA + H+ VI SGD
Sbjct: 54 DWDRYKSFKGAMHEANFELIEIPHVRQSGKNSADIRLVVDALDLCYTKSHVNTFVIISGD 113
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLS 147
F+ LV+ L+ K+V V S
Sbjct: 114 SDFSPLVSKLRENAKQVIGVGVQQS 138
Searching..................................................done
Results from round 2
>gi|222148076|ref|YP_002549033.1| hypothetical protein Avi_1440 [Agrobacterium vitis S4]
gi|221735064|gb|ACM36027.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 192
Score = 264 bits (676), Expect = 3e-69, Method: Composition-based stats.
Identities = 119/181 (65%), Positives = 150/181 (82%), Gaps = 2/181 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++
Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++V+ K AKEFT++ GR++VK +MD+ELA+DA EQSE ++HLVIFS
Sbjct: 59 SSIRPLIDWLDYNGYKVITKPAKEFTDSMGRRKVKGNMDIELAIDAMEQSETVDHLVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG FTTLV ALQRK +KV++VST+ + P M +D LRRQAD+F+DL LK EI RDP E
Sbjct: 119 GDGDFTTLVEALQRKGRKVSVVSTMSTQPPMIADDLRRQADHFIDLVSLKAEIGRDPSER 178
Query: 181 K 181
Sbjct: 179 P 179
>gi|227821396|ref|YP_002825366.1| hypothetical protein NGR_c08220 [Sinorhizobium fredii NGR234]
gi|227340395|gb|ACP24613.1| hypothetical protein NGR_c08220 [Sinorhizobium fredii NGR234]
Length = 192
Score = 264 bits (675), Expect = 4e-69, Method: Composition-based stats.
Identities = 118/179 (65%), Positives = 151/179 (84%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++
Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS
Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSLGRRKIKGNMDIELAIDAMEQSETVDHLVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG FTTLV ALQRK +KV++VST+ + P M +D LRRQAD+F+DLA L+ EI R+P E
Sbjct: 119 GDGDFTTLVEALQRKGRKVSVVSTMSTQPPMIADDLRRQADHFIDLATLRGEIGREPSE 177
>gi|254477746|ref|ZP_05091132.1| DUF88 [Ruegeria sp. R11]
gi|214031989|gb|EEB72824.1| DUF88 [Ruegeria sp. R11]
Length = 189
Score = 263 bits (674), Expect = 6e-69, Method: Composition-based stats.
Identities = 97/182 (53%), Positives = 137/182 (75%), Gaps = 2/182 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + E +
Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS
Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG F LV +LQR+ +V++VST+ S P M SD+LRRQAD F++L LK+ I R P E
Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELEELKDVIGRPPREQ 178
Query: 181 KK 182
+
Sbjct: 179 GE 180
>gi|51102762|gb|AAT95984.1| RtsE [Sinorhizobium meliloti]
Length = 191
Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats.
Identities = 118/179 (65%), Positives = 151/179 (84%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++
Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS
Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSLGRRKIKGNMDIELAIDAMEQSESVDHLVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG FTTLV ALQRK +KV++VST+ + P M +D LRRQAD+F+DLA L+ EI R+P E
Sbjct: 119 GDGDFTTLVEALQRKGRKVSVVSTMSTQPPMIADDLRRQADHFIDLATLRGEIGREPSE 177
>gi|15964816|ref|NP_385169.1| hypothetical protein SMc02407 [Sinorhizobium meliloti 1021]
gi|307300886|ref|ZP_07580655.1| protein of unknown function DUF88 [Sinorhizobium meliloti BL225C]
gi|307320703|ref|ZP_07600115.1| protein of unknown function DUF88 [Sinorhizobium meliloti AK83]
gi|15073995|emb|CAC45642.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
gi|306893630|gb|EFN24404.1| protein of unknown function DUF88 [Sinorhizobium meliloti AK83]
gi|306903841|gb|EFN34427.1| protein of unknown function DUF88 [Sinorhizobium meliloti BL225C]
Length = 192
Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats.
Identities = 118/179 (65%), Positives = 151/179 (84%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++
Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS
Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSLGRRKIKGNMDIELAIDAMEQSESVDHLVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG FTTLV ALQRK +KV++VST+ + P M +D LRRQAD+F+DLA L+ EI R+P E
Sbjct: 119 GDGDFTTLVEALQRKGRKVSVVSTMSTQPPMIADDLRRQADHFIDLATLRGEIGREPSE 177
>gi|150395899|ref|YP_001326366.1| hypothetical protein Smed_0675 [Sinorhizobium medicae WSM419]
gi|150027414|gb|ABR59531.1| protein of unknown function DUF88 [Sinorhizobium medicae WSM419]
Length = 193
Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats.
Identities = 118/179 (65%), Positives = 151/179 (84%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++
Sbjct: 2 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 59
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS
Sbjct: 60 SSIRPLIDWLDYNGYKVVTKPAKEFTDSLGRRKIKGNMDIELAIDAMEQSESVDHLVIFS 119
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG FTTLV ALQRK +KV++VST+ + P M +D LRRQAD+F+DLA L+ EI R+P E
Sbjct: 120 GDGDFTTLVEALQRKGRKVSVVSTMATQPPMIADDLRRQADHFIDLASLRAEIGREPSE 178
>gi|294678836|ref|YP_003579451.1| hypothetical protein RCAP_rcc03320 [Rhodobacter capsulatus SB 1003]
gi|294477656|gb|ADE87044.1| protein of unknown function DUF88 [Rhodobacter capsulatus SB 1003]
Length = 193
Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats.
Identities = 96/182 (52%), Positives = 136/182 (74%), Gaps = 2/182 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + E +
Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFERRGKLVRAFYYTALLENEE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWLHYNG+ +V K AKE+T++ GR++VK +MD+ELAV+A E + L+H V+FS
Sbjct: 59 SPIRPLVDWLHYNGYAMVTKPAKEYTDSMGRRKVKGNMDIELAVNAMELAPRLDHAVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG F LV ALQR +V++VST+ S P M +D+LRRQAD F++L L+ I R P E
Sbjct: 119 GDGDFRPLVEALQRMGVRVSVVSTIRSQPPMIADELRRQADNFIELDALREVIGRPPREP 178
Query: 181 KK 182
++
Sbjct: 179 RE 180
>gi|126728513|ref|ZP_01744329.1| hypothetical protein SSE37_21022 [Sagittula stellata E-37]
gi|126711478|gb|EBA10528.1| hypothetical protein SSE37_21022 [Sagittula stellata E-37]
Length = 195
Score = 262 bits (671), Expect = 1e-68, Method: Composition-based stats.
Identities = 95/181 (52%), Positives = 136/181 (75%), Gaps = 2/181 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + E +
Sbjct: 6 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFARRGKMVRAFYYTALLENDE--Y 63
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS
Sbjct: 64 SPIRPLVDWLHYNGFTMVTKPAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 123
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG F LV +LQR+ +V++VST+ S P M +D+LRRQAD F++L L+ I R P E
Sbjct: 124 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMIADELRRQADNFIELDELREVIGRPPREQ 183
Query: 181 K 181
+
Sbjct: 184 Q 184
>gi|146278613|ref|YP_001168772.1| hypothetical protein Rsph17025_2579 [Rhodobacter sphaeroides ATCC
17025]
gi|145556854|gb|ABP71467.1| protein of unknown function DUF88 [Rhodobacter sphaeroides ATCC
17025]
Length = 190
Score = 262 bits (670), Expect = 1e-68, Method: Composition-based stats.
Identities = 94/181 (51%), Positives = 136/181 (75%), Gaps = 2/181 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + + +
Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDD--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS
Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG F LV +LQR+ +V++VST+ S P M +D+LRRQAD F++L L+ I R P E
Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMIADELRRQADNFIELDELREVIGRPPREP 178
Query: 181 K 181
+
Sbjct: 179 R 179
>gi|77462212|ref|YP_351716.1| hypothetical protein RSP_1667 [Rhodobacter sphaeroides 2.4.1]
gi|126461074|ref|YP_001042188.1| hypothetical protein Rsph17029_0300 [Rhodobacter sphaeroides ATCC
17029]
gi|221641166|ref|YP_002527428.1| hypothetical protein RSKD131_3067 [Rhodobacter sphaeroides KD131]
gi|332560093|ref|ZP_08414415.1| hypothetical protein RSWS8N_13570 [Rhodobacter sphaeroides WS8N]
gi|77386630|gb|ABA77815.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1]
gi|126102738|gb|ABN75416.1| protein of unknown function DUF88 [Rhodobacter sphaeroides ATCC
17029]
gi|221161947|gb|ACM02927.1| Hypothetical Protein RSKD131_3067 [Rhodobacter sphaeroides KD131]
gi|332277805|gb|EGJ23120.1| hypothetical protein RSWS8N_13570 [Rhodobacter sphaeroides WS8N]
Length = 190
Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats.
Identities = 94/181 (51%), Positives = 136/181 (75%), Gaps = 2/181 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + + +
Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDD--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS
Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG F LV +LQR+ +V++VST+ S P M +D+LRRQAD F++L L+ I R P E
Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMIADELRRQADNFIELDELREVIGRPPREP 178
Query: 181 K 181
+
Sbjct: 179 R 179
>gi|190891066|ref|YP_001977608.1| hypothetical protein RHECIAT_CH0001451 [Rhizobium etli CIAT 652]
gi|218508406|ref|ZP_03506284.1| hypothetical protein RetlB5_12894 [Rhizobium etli Brasil 5]
gi|190696345|gb|ACE90430.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
gi|327191317|gb|EGE58350.1| hypothetical protein RHECNPAF_32006 [Rhizobium etli CNPAF512]
Length = 193
Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats.
Identities = 116/179 (64%), Positives = 149/179 (83%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++
Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS
Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSMGRRKIKGNMDIELAIDAMEQSETVDHLVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG FT LV ALQR+ +KV+++ST+ + P M +D LRRQAD+F+DL LK EI RDP E
Sbjct: 119 GDGDFTNLVEALQRRGRKVSVISTMATQPPMIADDLRRQADHFIDLLSLKAEIGRDPSE 177
>gi|260428353|ref|ZP_05782332.1| RtsE [Citreicella sp. SE45]
gi|260422845|gb|EEX16096.1| RtsE [Citreicella sp. SE45]
Length = 191
Score = 261 bits (667), Expect = 3e-68, Method: Composition-based stats.
Identities = 95/181 (52%), Positives = 136/181 (75%), Gaps = 2/181 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + E +
Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFVRRGKMVRAFYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS
Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG F LV +LQR+ +V++VST+ S P M +D+LRRQAD F++L L+ I R P E
Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMIADELRRQADNFIELDELREVIGRPPREQ 178
Query: 181 K 181
+
Sbjct: 179 Q 179
>gi|159184584|ref|NP_354050.2| hypothetical protein Atu1028 [Agrobacterium tumefaciens str. C58]
gi|159139886|gb|AAK86835.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 189
Score = 260 bits (666), Expect = 4e-68, Method: Composition-based stats.
Identities = 119/181 (65%), Positives = 150/181 (82%), Gaps = 2/181 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++
Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K AKEFT+ GR+++K +MD+ELAVDA EQSE ++HLV+FS
Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDALGRRKIKGNMDIELAVDAMEQSETVDHLVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG FTTLV ALQRK +KV++VST+ + P+M +D LRRQAD+F+DL LK EI RDP E
Sbjct: 119 GDGDFTTLVDALQRKGRKVSVVSTMATQPAMIADDLRRQADHFIDLMTLKAEIGRDPSER 178
Query: 181 K 181
Sbjct: 179 P 179
>gi|84500570|ref|ZP_00998819.1| hypothetical protein OB2597_11446 [Oceanicola batsensis HTCC2597]
gi|84391523|gb|EAQ03855.1| hypothetical protein OB2597_11446 [Oceanicola batsensis HTCC2597]
Length = 190
Score = 260 bits (666), Expect = 5e-68, Method: Composition-based stats.
Identities = 95/181 (52%), Positives = 137/181 (75%), Gaps = 2/181 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + E +
Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS
Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG F LV +LQR+ +V++VST+ S P M +D+LRRQAD F++L L++ I R P E
Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMIADELRRQADNFIELDDLRDVIGRPPRET 178
Query: 181 K 181
+
Sbjct: 179 Q 179
>gi|325292407|ref|YP_004278271.1| hypothetical protein AGROH133_05017 [Agrobacterium sp. H13-3]
gi|325060260|gb|ADY63951.1| hypothetical protein AGROH133_05017 [Agrobacterium sp. H13-3]
Length = 189
Score = 260 bits (666), Expect = 5e-68, Method: Composition-based stats.
Identities = 118/181 (65%), Positives = 150/181 (82%), Gaps = 2/181 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++
Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K AKEFT+ GR+++K +MD+ELAVDA EQSE ++HLV+FS
Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDALGRRKIKGNMDIELAVDAMEQSETVDHLVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG FT LV ALQRK +KV++VST+ + P+M +D LRRQAD+F+DL LK EI RDP+E
Sbjct: 119 GDGDFTKLVDALQRKGRKVSVVSTMATQPAMIADDLRRQADHFIDLMTLKAEIGRDPNER 178
Query: 181 K 181
Sbjct: 179 P 179
>gi|56698038|ref|YP_168409.1| hypothetical protein SPO3206 [Ruegeria pomeroyi DSS-3]
gi|56679775|gb|AAV96441.1| conserved hypothetical protein [Ruegeria pomeroyi DSS-3]
Length = 190
Score = 260 bits (666), Expect = 5e-68, Method: Composition-based stats.
Identities = 97/179 (54%), Positives = 136/179 (75%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + E +
Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKMLRAFYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS
Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F LVA+LQR+ +V++VST+ S P M SD+LRRQAD F++L L+ I R P E
Sbjct: 119 GDGDFRPLVASLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELEELREVIGRPPRE 177
>gi|315122349|ref|YP_004062838.1| hypothetical protein CKC_03005 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495751|gb|ADR52350.1| hypothetical protein CKC_03005 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 205
Score = 260 bits (665), Expect = 6e-68, Method: Composition-based stats.
Identities = 150/179 (83%), Positives = 169/179 (94%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFDPREKIALFIDGANLYA+SKALGFDIDYRKLLKAF++RA V+RAYYYTTV+GD +QQ+
Sbjct: 1 MFDPREKIALFIDGANLYAASKALGFDIDYRKLLKAFKARARVLRAYYYTTVLGDSDQQY 60
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SPLHPLLDWLHYNGF+VV+KVAKEFTE+CGRK++K+SMDVELAVDAFEQSEG++HLVIFS
Sbjct: 61 SPLHPLLDWLHYNGFKVVSKVAKEFTESCGRKKIKASMDVELAVDAFEQSEGIDHLVIFS 120
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F TLV ALQRK KKVTIVSTVLS+PSM SDQLRRQAD+F+DLAYLKNEI R+ E
Sbjct: 121 GDGDFATLVEALQRKSKKVTIVSTVLSNPSMVSDQLRRQADHFIDLAYLKNEIQRESCE 179
>gi|116251270|ref|YP_767108.1| hypothetical protein RL1504 [Rhizobium leguminosarum bv. viciae
3841]
gi|115255918|emb|CAK06999.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 193
Score = 260 bits (665), Expect = 6e-68, Method: Composition-based stats.
Identities = 116/179 (64%), Positives = 149/179 (83%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++
Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS
Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSMGRRKIKGNMDIELAIDAMEQSETVDHLVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG FT LV ALQR+ +KV+++ST+ + P M +D LRRQAD+F+DL LK EI RDP E
Sbjct: 119 GDGDFTNLVEALQRRGRKVSVISTMATQPPMIADDLRRQADHFIDLLSLKAEIGRDPSE 177
>gi|241203882|ref|YP_002974978.1| hypothetical protein Rleg_1144 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240857772|gb|ACS55439.1| protein of unknown function DUF88 [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 193
Score = 260 bits (665), Expect = 6e-68, Method: Composition-based stats.
Identities = 116/179 (64%), Positives = 149/179 (83%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++
Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS
Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSMGRRKIKGNMDIELAIDAMEQSETVDHLVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG FT LV ALQR+ +KV+++ST+ + P M +D LRRQAD+F+DL LK EI RDP E
Sbjct: 119 GDGDFTNLVEALQRRGRKVSVISTMATQPPMIADDLRRQADHFIDLLSLKAEIGRDPSE 177
>gi|89070109|ref|ZP_01157439.1| hypothetical protein OG2516_09048 [Oceanicola granulosus HTCC2516]
gi|89044330|gb|EAR50473.1| hypothetical protein OG2516_09048 [Oceanicola granulosus HTCC2516]
Length = 193
Score = 260 bits (665), Expect = 7e-68, Method: Composition-based stats.
Identities = 95/181 (52%), Positives = 136/181 (75%), Gaps = 2/181 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA++K+LGFDIDY+ L + F R ++RA+YYT ++ + + +
Sbjct: 1 MFYRDERLALFIDGSNLYAAAKSLGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDD--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWLHYNGF +V K AKEFT++ GR++VK +MD+EL VDA E + ++H+V+FS
Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEFTDSQGRRKVKGNMDIELTVDAMEIASHVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG F LV ALQRK +V++ ST+ S P M +D+LRRQAD F++L L+ + R P ED
Sbjct: 119 GDGDFRPLVEALQRKGVRVSVCSTIRSQPPMIADELRRQADNFIELDELREVVGRPPRED 178
Query: 181 K 181
+
Sbjct: 179 R 179
>gi|126739732|ref|ZP_01755424.1| hypothetical protein RSK20926_05732 [Roseobacter sp. SK209-2-6]
gi|126719378|gb|EBA16088.1| hypothetical protein RSK20926_05732 [Roseobacter sp. SK209-2-6]
Length = 190
Score = 260 bits (665), Expect = 7e-68, Method: Composition-based stats.
Identities = 95/181 (52%), Positives = 138/181 (76%), Gaps = 2/181 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA++K+LGFDIDY+ L + F R ++RA+YYT ++ + E +
Sbjct: 1 MFYKDERLALFIDGSNLYAAAKSLGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS
Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG F L+A+LQR+ +V++VST+ S P M SD+LRRQAD F++L LK+ I R P ++
Sbjct: 119 GDGDFRPLIASLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELEELKDVIGRPPRDN 178
Query: 181 K 181
Sbjct: 179 P 179
>gi|86137266|ref|ZP_01055844.1| hypothetical protein MED193_16367 [Roseobacter sp. MED193]
gi|85826590|gb|EAQ46787.1| hypothetical protein MED193_16367 [Roseobacter sp. MED193]
Length = 190
Score = 260 bits (664), Expect = 7e-68, Method: Composition-based stats.
Identities = 98/181 (54%), Positives = 138/181 (76%), Gaps = 2/181 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + E +
Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+ELAVDA E + ++H+V+FS
Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELAVDAMELAPRVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG F L+A+LQR+ +V++VST+ S P M SD+LRRQAD F++L LK+ I R P E
Sbjct: 119 GDGDFRPLIASLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELEELKDVIGRPPREH 178
Query: 181 K 181
Sbjct: 179 P 179
>gi|254504996|ref|ZP_05117147.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
gi|222441067|gb|EEE47746.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
Length = 196
Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats.
Identities = 105/182 (57%), Positives = 146/182 (80%), Gaps = 2/182 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFD REK+ALFIDGANLY+++KA+GFDIDY++LLK F+ +A ++RAYYYT ++ D Q++
Sbjct: 1 MFDAREKVALFIDGANLYSTAKAIGFDIDYKRLLKEFQGQAYLLRAYYYTALIED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++V+ K KEF ++ GR++VK +MD+ELAVDA E E ++H+V+FS
Sbjct: 59 SSIRPLIDWLDYNGYKVITKPVKEFVDSAGRRKVKGNMDIELAVDAMELVESVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG F +LV ALQRK +KV++VST+ + P M +D LRRQAD+F+DLA L N+I RDP E
Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLKTQPPMIADDLRRQADHFIDLASLANKIGRDPSER 178
Query: 181 KK 182
+
Sbjct: 179 PQ 180
>gi|83951635|ref|ZP_00960367.1| hypothetical protein ISM_13770 [Roseovarius nubinhibens ISM]
gi|83836641|gb|EAP75938.1| hypothetical protein ISM_13770 [Roseovarius nubinhibens ISM]
Length = 191
Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats.
Identities = 97/180 (53%), Positives = 136/180 (75%), Gaps = 2/180 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA+ KALGFDIDY+ L F R ++RA+YYT ++ + E +
Sbjct: 1 MFYKDERLALFIDGSNLYAAGKALGFDIDYKLLRSEFMRRGKLLRAFYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+ELAVDA E + ++H+V+FS
Sbjct: 59 SPIRPLVDWLHYNGFSMVTKPAKEYTDSQGRRKVKGNMDIELAVDAMELAPHVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG F LV +LQR+ +V++VST+ S P M SD+LRRQAD F++L LK+ I R P ++
Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELDDLKDVIGRPPRDN 178
>gi|86357021|ref|YP_468913.1| hypothetical protein RHE_CH01383 [Rhizobium etli CFN 42]
gi|86281123|gb|ABC90186.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 193
Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats.
Identities = 116/179 (64%), Positives = 149/179 (83%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++
Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS
Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSMGRRKIKGNMDIELAIDAMEQSETVDHLVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG FT LV ALQR+ +KV+++ST+ + P M +D LRRQAD+F+DL LK EI RDP E
Sbjct: 119 GDGDFTNLVEALQRRGRKVSVISTMATQPPMIADDLRRQADHFIDLLSLKAEIGRDPAE 177
>gi|209548594|ref|YP_002280511.1| hypothetical protein Rleg2_0991 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209534350|gb|ACI54285.1| protein of unknown function DUF88 [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 195
Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats.
Identities = 116/179 (64%), Positives = 149/179 (83%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++
Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS
Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSMGRRKIKGNMDIELAIDAMEQSETVDHLVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG FT LV ALQR+ +KV+++ST+ + P M +D LRRQAD+F+DL LK EI RDP E
Sbjct: 119 GDGDFTNLVEALQRRGRKVSVISTMSTQPPMIADDLRRQADHFIDLLSLKAEIGRDPAE 177
>gi|84684017|ref|ZP_01011919.1| hypothetical protein 1099457000262_RB2654_16251 [Maritimibacter
alkaliphilus HTCC2654]
gi|84667770|gb|EAQ14238.1| hypothetical protein RB2654_16251 [Rhodobacterales bacterium
HTCC2654]
Length = 191
Score = 259 bits (662), Expect = 1e-67, Method: Composition-based stats.
Identities = 96/181 (53%), Positives = 136/181 (75%), Gaps = 2/181 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA++K+LGFDIDY+ L + F R ++RA+YYT ++ + + +
Sbjct: 1 MFYKDERLALFIDGSNLYAAAKSLGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDD--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWLHYNGF +V K AKEFT++ GR++VK +MD+EL VDA E + ++H+V+FS
Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEFTDSMGRRKVKGNMDIELTVDAMEIAPHVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG F LV LQRK +V++VST+ S P M +D+LRRQAD F++L LK I R P +D
Sbjct: 119 GDGDFRPLVEGLQRKGVRVSVVSTIRSQPPMIADELRRQADNFIELDELKEVIGRPPRDD 178
Query: 181 K 181
+
Sbjct: 179 R 179
>gi|254511909|ref|ZP_05123976.1| hypothetical protein RKLH11_2451 [Rhodobacteraceae bacterium KLH11]
gi|221535620|gb|EEE38608.1| hypothetical protein RKLH11_2451 [Rhodobacteraceae bacterium KLH11]
Length = 191
Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats.
Identities = 96/179 (53%), Positives = 137/179 (76%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + E +
Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS
Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F L+A+LQR+ +V++VST+ S P M SD+LRRQAD F++L L++ I R P E
Sbjct: 119 GDGDFRPLIASLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELEDLRDVIGRPPRE 177
>gi|163738230|ref|ZP_02145646.1| hypothetical protein RGBS107_07449 [Phaeobacter gallaeciensis
BS107]
gi|163740168|ref|ZP_02147562.1| hypothetical protein RG210_08712 [Phaeobacter gallaeciensis 2.10]
gi|161386026|gb|EDQ10401.1| hypothetical protein RG210_08712 [Phaeobacter gallaeciensis 2.10]
gi|161388846|gb|EDQ13199.1| hypothetical protein RGBS107_07449 [Phaeobacter gallaeciensis
BS107]
Length = 189
Score = 258 bits (661), Expect = 2e-67, Method: Composition-based stats.
Identities = 97/180 (53%), Positives = 137/180 (76%), Gaps = 2/180 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + E +
Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS
Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG F L+A+LQR+ +V++VST+ S P M SD+LRRQAD F++L LK+ I R P E
Sbjct: 119 GDGDFRPLIASLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELEELKDVIGRPPREQ 178
>gi|83593194|ref|YP_426946.1| hypothetical protein Rru_A1859 [Rhodospirillum rubrum ATCC 11170]
gi|83576108|gb|ABC22659.1| Protein of unknown function DUF88 [Rhodospirillum rubrum ATCC
11170]
Length = 214
Score = 258 bits (661), Expect = 2e-67, Method: Composition-based stats.
Identities = 98/183 (53%), Positives = 138/183 (75%), Gaps = 4/183 (2%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+F P+E+I LFIDG+NLYA+++ALGFDIDY++LL+ F ++ +IRA+YYT +V D Q++
Sbjct: 2 IFYPQERIGLFIDGSNLYAAARALGFDIDYKRLLELFAAKGRLIRAFYYTALVED--QEY 59
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWL YNG+ +V K KEFT+ GR+++K +MD+ELA+D E + L+H+V+FS
Sbjct: 60 SPIRPLVDWLDYNGYTMVTKPTKEFTDATGRRKIKGNMDIELAIDVMEMAPHLDHIVLFS 119
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP--D 178
GDG F LV A+QRK +VT+VSTV S P M +D+LRRQAD F++L L+ IAR P
Sbjct: 120 GDGDFRRLVDAVQRKGLRVTVVSTVRSQPPMVADELRRQADTFIELLDLEPSIARAPLHR 179
Query: 179 EDK 181
E
Sbjct: 180 EPP 182
>gi|163733871|ref|ZP_02141313.1| hypothetical protein RLO149_06148 [Roseobacter litoralis Och 149]
gi|161392982|gb|EDQ17309.1| hypothetical protein RLO149_06148 [Roseobacter litoralis Och 149]
Length = 182
Score = 258 bits (661), Expect = 2e-67, Method: Composition-based stats.
Identities = 95/179 (53%), Positives = 136/179 (75%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA++K+LGFDIDY+ L + F R ++RA+YYT ++ + E +
Sbjct: 1 MFYKDERLALFIDGSNLYAAAKSLGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWL+YNGF +V K AKE+T++ GR++VK +MD+ELAVDA E + ++H+V+FS
Sbjct: 59 SPIRPLVDWLNYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELAVDAMELAPRVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F L+ +LQR +V++VST+ S P M SD+LRRQAD F++L LK+ I R P E
Sbjct: 119 GDGDFRPLIESLQRSGVRVSVVSTIRSQPPMISDELRRQADNFIELDELKDVIGRPPRE 177
>gi|218678619|ref|ZP_03526516.1| hypothetical protein RetlC8_06939 [Rhizobium etli CIAT 894]
Length = 193
Score = 258 bits (661), Expect = 2e-67, Method: Composition-based stats.
Identities = 116/179 (64%), Positives = 149/179 (83%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++
Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS
Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSMGRRKIKGNMDIELAIDAMEQSETVDHLVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG FT LV ALQR+ +KV+++ST+ + P M +D LRRQAD+F+DL LK EI RDP E
Sbjct: 119 GDGDFTNLVEALQRRGRKVSVISTMATQPPMIADDLRRQADHFIDLLSLKAEIGRDPAE 177
>gi|222085384|ref|YP_002543914.1| hypothetical protein Arad_1584 [Agrobacterium radiobacter K84]
gi|221722832|gb|ACM25988.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 194
Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats.
Identities = 116/182 (63%), Positives = 151/182 (82%), Gaps = 2/182 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++
Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS
Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSMGRRKIKGNMDIELAIDAMEQSETVDHLVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG FTTLV ALQR+ +KV+++ST+ + P M +D LRRQAD+F+DL LK EI RDP +
Sbjct: 119 GDGDFTTLVEALQRRGRKVSVISTMATQPPMIADDLRRQADHFIDLVSLKAEIGRDPSDR 178
Query: 181 KK 182
+
Sbjct: 179 PQ 180
>gi|254453678|ref|ZP_05067115.1| DUF88 [Octadecabacter antarcticus 238]
gi|198268084|gb|EDY92354.1| DUF88 [Octadecabacter antarcticus 238]
Length = 194
Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats.
Identities = 96/182 (52%), Positives = 135/182 (74%), Gaps = 2/182 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF EK+ALFIDG+NLYA++KALGFDIDY+ L F R ++RA+YYT ++ + E +
Sbjct: 1 MFYRDEKLALFIDGSNLYAAAKALGFDIDYKLLRSEFMRRGKMLRAFYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWL+YNGF +V K AKEFT++ GR+++K +MD+ELAVDA E + ++H+VIFS
Sbjct: 59 SPIRPLVDWLNYNGFTMVTKPAKEFTDSMGRRKIKGNMDIELAVDALELAPHVDHIVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG F LV +LQRK +V++VST+ S P M +D+LRRQ D F++L L++ I R E
Sbjct: 119 GDGDFRPLVESLQRKGVRVSVVSTIRSQPPMIADELRRQCDNFIELDELRDVIGRPTREA 178
Query: 181 KK 182
+
Sbjct: 179 PR 180
>gi|227819053|ref|YP_002823024.1| hypothetical protein NGR_b08150 [Sinorhizobium fredii NGR234]
gi|227338052|gb|ACP22271.1| conserved hypothetical protein [Sinorhizobium fredii NGR234]
Length = 194
Score = 258 bits (660), Expect = 2e-67, Method: Composition-based stats.
Identities = 119/179 (66%), Positives = 149/179 (83%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFDPREKIALFIDGANL+A+SK LGFDIDYRKLL+AFRSRA ++RAYYYT ++ D E F
Sbjct: 1 MFDPREKIALFIDGANLFATSKTLGFDIDYRKLLEAFRSRAYLLRAYYYTALIEDLE--F 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG+ VV K AKEFT++ GR+++K SMD+ELA+DA E S+ ++H VIFS
Sbjct: 59 SSIRPLIDWLDYNGYTVVTKPAKEFTDSQGRRKIKGSMDIELAIDAMEHSQTVDHFVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG FT LV ALQRK +KV++VST+L+ P M +DQLRRQAD+F+DLA L++EI R P E
Sbjct: 119 GDGDFTPLVEALQRKGRKVSVVSTILTQPPMIADQLRRQADHFIDLATLRSEIGRHPRE 177
>gi|99082408|ref|YP_614562.1| hypothetical protein TM1040_2568 [Ruegeria sp. TM1040]
gi|99038688|gb|ABF65300.1| protein of unknown function DUF88 [Ruegeria sp. TM1040]
Length = 189
Score = 258 bits (659), Expect = 3e-67, Method: Composition-based stats.
Identities = 97/179 (54%), Positives = 137/179 (76%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYAS+KALGFDIDY+ L + F R ++RA+YYT ++ + E +
Sbjct: 1 MFYKDERLALFIDGSNLYASAKALGFDIDYKLLRQEFMRRGKLVRAFYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS
Sbjct: 59 SPIRPLVDWLHYNGFSMVTKPAKEYTDSMGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F L+A+LQR+ +V++VST+ S P M SD+LRRQAD F++L L++ I R P E
Sbjct: 119 GDGDFRPLIASLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELEELRDVIGRPPRE 177
>gi|149913459|ref|ZP_01901992.1| hypothetical protein RAZWK3B_09161 [Roseobacter sp. AzwK-3b]
gi|149812579|gb|EDM72408.1| hypothetical protein RAZWK3B_09161 [Roseobacter sp. AzwK-3b]
Length = 190
Score = 258 bits (659), Expect = 3e-67, Method: Composition-based stats.
Identities = 94/180 (52%), Positives = 135/180 (75%), Gaps = 2/180 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA+++ALGFDIDY+ L F R ++RA+YYT ++ + E +
Sbjct: 1 MFYKDERLALFIDGSNLYAAARALGFDIDYKLLRAEFMRRGKLLRAFYYTAMLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWL+YNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS
Sbjct: 59 SPIRPLVDWLNYNGFSMVTKPAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG F LV +LQR+ +V++VST+ S P M SD+LRRQAD F++L LK+ I R P +
Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELDDLKDVIGRPPRDP 178
>gi|255263963|ref|ZP_05343305.1| hypothetical protein TR2A62_2961 [Thalassiobium sp. R2A62]
gi|255106298|gb|EET48972.1| hypothetical protein TR2A62_2961 [Thalassiobium sp. R2A62]
Length = 192
Score = 258 bits (659), Expect = 3e-67, Method: Composition-based stats.
Identities = 96/179 (53%), Positives = 136/179 (75%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA++KALGFDIDY+ L F R ++RA+YYT ++ + E +
Sbjct: 1 MFYRDERLALFIDGSNLYAAAKALGFDIDYKLLRTEFMRRGKMLRAFYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWL+YNGF +V K AKEFT++ GR+++K +MD+ELAVDA E + ++H+VIFS
Sbjct: 59 SPIRPLVDWLNYNGFTMVTKPAKEFTDSIGRRKIKGNMDIELAVDAMELAPHVDHIVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F LV A+QRK +V++VST+ S P M +D+LRRQAD F++L L++ + R P E
Sbjct: 119 GDGDFRPLVEAIQRKGVRVSVVSTIRSQPPMIADELRRQADNFIELDELRDVVGRPPRE 177
>gi|83855035|ref|ZP_00948565.1| hypothetical protein NAS141_09906 [Sulfitobacter sp. NAS-14.1]
gi|83941558|ref|ZP_00954020.1| hypothetical protein EE36_04978 [Sulfitobacter sp. EE-36]
gi|83842878|gb|EAP82045.1| hypothetical protein NAS141_09906 [Sulfitobacter sp. NAS-14.1]
gi|83847378|gb|EAP85253.1| hypothetical protein EE36_04978 [Sulfitobacter sp. EE-36]
Length = 181
Score = 258 bits (659), Expect = 3e-67, Method: Composition-based stats.
Identities = 96/179 (53%), Positives = 135/179 (75%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA++K LGFDIDY+ L + F R ++RA+YYT ++ + E +
Sbjct: 1 MFYKDERLALFIDGSNLYAAAKNLGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWL+YNGF +V K AKE+T++ GR++VK +MD+ELAVDA E + L+H+VIFS
Sbjct: 59 SPIRPLVDWLNYNGFSMVTKPAKEYTDSMGRRKVKGNMDIELAVDAMELAPHLDHIVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F LV +LQR+ +V++VST+ S P M SD+LRRQ D F++L L++ I R P E
Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMISDELRRQVDNFIELEDLRDVIGRPPRE 177
>gi|254469949|ref|ZP_05083354.1| DUF88 [Pseudovibrio sp. JE062]
gi|211961784|gb|EEA96979.1| DUF88 [Pseudovibrio sp. JE062]
Length = 194
Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats.
Identities = 101/181 (55%), Positives = 145/181 (80%), Gaps = 2/181 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFDPREKIALFIDGANLY+++KA+GFDIDY++LLK F+S+ ++RAYYYT +V EQ++
Sbjct: 1 MFDPREKIALFIDGANLYSTAKAIGFDIDYKRLLKEFQSKGYLLRAYYYTALVE--EQEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K KEF ++ GR+++K +MD+ELAVDA + + ++H+V+FS
Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPVKEFVDSAGRRKIKGNMDIELAVDAMQLIDHVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG F +LV ALQR+ +KV++VST+ + P M +D LRRQAD+F++L+ L + RDP+E
Sbjct: 119 GDGDFRSLVEALQRRGRKVSVVSTLQTQPPMIADDLRRQADHFIELSTLMQRVGRDPNER 178
Query: 181 K 181
Sbjct: 179 P 179
>gi|110678677|ref|YP_681684.1| hypothetical protein RD1_1356 [Roseobacter denitrificans OCh 114]
gi|109454793|gb|ABG30998.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114]
Length = 182
Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats.
Identities = 94/179 (52%), Positives = 135/179 (75%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA++K+LGFDIDY+ L + F R ++RA+YYT ++ + E +
Sbjct: 1 MFYKDERLALFIDGSNLYAAAKSLGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWL+YNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS
Sbjct: 59 SPIRPLVDWLNYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F L+ +LQR +V++VST+ S P M SD+LRRQAD F++L LK+ I R P E
Sbjct: 119 GDGDFRPLIESLQRSGVRVSVVSTIRSQPPMISDELRRQADNFIELDELKDVIGRPPRE 177
>gi|260576279|ref|ZP_05844271.1| protein of unknown function DUF88 [Rhodobacter sp. SW2]
gi|259021547|gb|EEW24851.1| protein of unknown function DUF88 [Rhodobacter sp. SW2]
Length = 190
Score = 256 bits (655), Expect = 8e-67, Method: Composition-based stats.
Identities = 94/181 (51%), Positives = 137/181 (75%), Gaps = 2/181 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF +++ALFIDG+NLYA++KALGFDIDYR L + F R ++RA+YYT ++ + E +
Sbjct: 1 MFYKDDRLALFIDGSNLYAAAKALGFDIDYRLLRQEFMRRGKLLRAFYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL V+A E + ++H+V+FS
Sbjct: 59 SPIRPLVDWLHYNGFSMVTKPAKEYTDSQGRRKVKGNMDIELTVNAMELAPHVDHVVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG F LV +LQR+ +V++VST+ S P M +D+LRRQAD F++L L++ I R P E
Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMIADELRRQADNFIELDELRDVIGRPPREP 178
Query: 181 K 181
+
Sbjct: 179 R 179
>gi|85705102|ref|ZP_01036202.1| hypothetical protein ROS217_04305 [Roseovarius sp. 217]
gi|85670424|gb|EAQ25285.1| hypothetical protein ROS217_04305 [Roseovarius sp. 217]
Length = 190
Score = 256 bits (655), Expect = 9e-67, Method: Composition-based stats.
Identities = 96/179 (53%), Positives = 135/179 (75%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA+ KALGFDIDY+ L F R ++RA+YYT ++ + E +
Sbjct: 1 MFYKDERLALFIDGSNLYAAGKALGFDIDYKLLRSEFMRRGKLLRAFYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWLHYNG+ +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS
Sbjct: 59 SPIRPLVDWLHYNGYSMVTKPAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F LV +LQR+ +V++VST+ S P M SD+LRRQAD F++LA LK+ I R P +
Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELADLKDVIGRPPRD 177
>gi|163760601|ref|ZP_02167682.1| hypothetical protein HPDFL43_11921 [Hoeflea phototrophica DFL-43]
gi|162282216|gb|EDQ32506.1| hypothetical protein HPDFL43_11921 [Hoeflea phototrophica DFL-43]
Length = 196
Score = 256 bits (655), Expect = 9e-67, Method: Composition-based stats.
Identities = 115/182 (63%), Positives = 151/182 (82%), Gaps = 2/182 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFDPREKIALFIDGANLYA+SK+L FDIDYRKLLK+F+ R ++RAYYYT ++ D Q++
Sbjct: 1 MFDPREKIALFIDGANLYAASKSLNFDIDYRKLLKSFQGRGYLLRAYYYTALIED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+ELA+DA EQ+E ++HLVIFS
Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSMGRRKVKGNMDIELAIDAMEQAEVVDHLVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG FT+LV ALQRK +KVT+VS++ + P M +D LRRQADYF+DL+ LK+EI R+ E
Sbjct: 119 GDGDFTSLVEALQRKGRKVTVVSSLSTQPPMIADDLRRQADYFLDLSTLKSEIGRESSER 178
Query: 181 KK 182
+
Sbjct: 179 PQ 180
>gi|260432747|ref|ZP_05786718.1| RtsE [Silicibacter lacuscaerulensis ITI-1157]
gi|260416575|gb|EEX09834.1| RtsE [Silicibacter lacuscaerulensis ITI-1157]
Length = 190
Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats.
Identities = 95/179 (53%), Positives = 137/179 (76%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + E +
Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWL+YNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS
Sbjct: 59 SPIRPLVDWLNYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F L+A+LQR+ +V++VST+ S P M SD+LRRQAD F++L L++ I R P E
Sbjct: 119 GDGDFRPLIASLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELDDLRDVIGRPPRE 177
>gi|254465558|ref|ZP_05078969.1| hypothetical protein RBY4I_2165 [Rhodobacterales bacterium Y4I]
gi|206686466|gb|EDZ46948.1| hypothetical protein RBY4I_2165 [Rhodobacterales bacterium Y4I]
Length = 189
Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats.
Identities = 96/180 (53%), Positives = 136/180 (75%), Gaps = 2/180 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + E +
Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS
Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEYTDSLGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG F L+A+LQR+ +V++VST+ S P M SD LRRQAD F++L L++ I R P E
Sbjct: 119 GDGDFRPLIASLQRQGVRVSVVSTIRSQPPMISDDLRRQADNFIELEELRDVIGRPPREQ 178
>gi|307946592|ref|ZP_07661927.1| RtsE [Roseibium sp. TrichSKD4]
gi|307770256|gb|EFO29482.1| RtsE [Roseibium sp. TrichSKD4]
Length = 194
Score = 256 bits (654), Expect = 1e-66, Method: Composition-based stats.
Identities = 104/181 (57%), Positives = 146/181 (80%), Gaps = 2/181 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFD REK+ALFIDGANLY+++KA+GFDIDY++LLK F+ +A ++RAYYYT ++ D Q++
Sbjct: 1 MFDAREKVALFIDGANLYSTAKAIGFDIDYKRLLKEFQGQAYLLRAYYYTALIED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++V+ K KEF ++ GR++VK +MD+ELAVDA +Q E ++H+V+FS
Sbjct: 59 SSIRPLIDWLDYNGYKVITKPVKEFVDSTGRRKVKGNMDIELAVDAMQQVEHVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG F +LV ALQR+ +KV++VST+ + P M +D LRRQAD+F+DLA L N+I RDP E
Sbjct: 119 GDGDFRSLVEALQRRGRKVSVVSTLKTQPPMIADDLRRQADHFIDLASLANKIGRDPSER 178
Query: 181 K 181
Sbjct: 179 P 179
>gi|170748311|ref|YP_001754571.1| hypothetical protein Mrad2831_1893 [Methylobacterium radiotolerans
JCM 2831]
gi|170654833|gb|ACB23888.1| protein of unknown function DUF88 [Methylobacterium radiotolerans
JCM 2831]
Length = 213
Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 97/177 (54%), Positives = 138/177 (77%), Gaps = 2/177 (1%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
++ A+FIDGANLYA++KALGFDIDY+KLLK F+SR ++RA+YYT ++ D Q++S +
Sbjct: 4 TQRSAIFIDGANLYATTKALGFDIDYKKLLKEFQSRENLLRAFYYTAMIED--QEYSSIR 61
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
PL+DWL YNG++VV K KEFT++ GR++ K +MD+ELA+DA E S ++H+++FSGDG
Sbjct: 62 PLIDWLDYNGYRVVTKPVKEFTDSMGRRKYKGNMDIELAIDALELSPHIDHMILFSGDGD 121
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
F +LV A+QR+ KVT++ST+ + P+M SD+LRRQAD F+DLA L I R+P E
Sbjct: 122 FRSLVEAMQRRGVKVTVISTIQTQPAMISDELRRQADEFVDLASLAGRIGREPGERP 178
>gi|126733749|ref|ZP_01749496.1| hypothetical protein RCCS2_06319 [Roseobacter sp. CCS2]
gi|126716615|gb|EBA13479.1| hypothetical protein RCCS2_06319 [Roseobacter sp. CCS2]
Length = 193
Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 93/181 (51%), Positives = 137/181 (75%), Gaps = 2/181 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA++K+LGFDIDY+ L + F R ++RA+YYT ++ + E +
Sbjct: 1 MFYRDERLALFIDGSNLYAAAKSLGFDIDYKLLRQEFMRRGKMLRAFYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWL+YNGF +V K AKE+T++ GR++VK +MD+ELAVDA E + ++H+V+FS
Sbjct: 59 SPIRPLVDWLNYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELAVDAMELAPYVDHVVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG F LV +LQRK +V++VST+ S P M +D+LRRQAD F++L L++ + R E
Sbjct: 119 GDGDFRPLVESLQRKGVRVSVVSTIRSQPPMIADELRRQADNFIELDELRDVVGRPTREP 178
Query: 181 K 181
+
Sbjct: 179 R 179
>gi|254460504|ref|ZP_05073920.1| hypothetical protein RB2083_1094 [Rhodobacterales bacterium
HTCC2083]
gi|206677093|gb|EDZ41580.1| hypothetical protein RB2083_1094 [Rhodobacteraceae bacterium
HTCC2083]
Length = 190
Score = 255 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 95/182 (52%), Positives = 135/182 (74%), Gaps = 2/182 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG NLYA++KALGFDIDY+ L F R ++RA+YYT ++ + E +
Sbjct: 1 MFYKDERLALFIDGLNLYAAAKALGFDIDYKLLRTEFMRRGKMLRAFYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWL+YNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS
Sbjct: 59 SPIRPLVDWLNYNGFTMVTKQAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG F LV +LQR+ +V++VST+ S P M SD+LRRQAD F++L LK+ + R P E
Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELDELKDVLGRPPREP 178
Query: 181 KK 182
+
Sbjct: 179 ME 180
>gi|259417563|ref|ZP_05741482.1| hypothetical protein SCH4B_2747 [Silicibacter sp. TrichCH4B]
gi|259346469|gb|EEW58283.1| hypothetical protein SCH4B_2747 [Silicibacter sp. TrichCH4B]
Length = 189
Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats.
Identities = 96/179 (53%), Positives = 137/179 (76%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYAS+KALGFDIDY+ L + F R ++RA+YYT ++ + E +
Sbjct: 1 MFYKDERLALFIDGSNLYASAKALGFDIDYKLLRQEFMRRGKLVRAFYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS
Sbjct: 59 SPIRPLVDWLHYNGFSMVTKPAKEYTDSMGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F L+A+LQR+ +V++VST+ S P M SD+LRRQAD F++L L++ I R P +
Sbjct: 119 GDGDFRPLIASLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELEELRDVIGRPPRD 177
>gi|13476434|ref|NP_108004.1| hypothetical protein mll7752 [Mesorhizobium loti MAFF303099]
gi|319784512|ref|YP_004143988.1| hypothetical protein Mesci_4829 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|14027195|dbj|BAB54149.1| mll7752 [Mesorhizobium loti MAFF303099]
gi|317170400|gb|ADV13938.1| hypothetical protein Mesci_4829 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 193
Score = 255 bits (652), Expect = 2e-66, Method: Composition-based stats.
Identities = 116/181 (64%), Positives = 146/181 (80%), Gaps = 2/181 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFDPREKIALFIDGANLYA+S+ALGFDIDYRKLL +F+ R ++RAYYYT +V D Q++
Sbjct: 1 MFDPREKIALFIDGANLYATSRALGFDIDYRKLLSSFQKRGYLLRAYYYTALVED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNGF+VV K AKEFT++ GR+++K +MD+EL VDA E ++ ++H VIFS
Sbjct: 59 SSIRPLIDWLDYNGFKVVTKPAKEFTDSTGRRKIKGNMDIELTVDALELADVVDHYVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG F TLV ALQR+ +KV+IVST+ S P M SD LRRQAD+F+DL LKNE+ RDP E
Sbjct: 119 GDGDFRTLVEALQRRGRKVSIVSTMASQPPMISDDLRRQADHFIDLTTLKNEVGRDPSER 178
Query: 181 K 181
Sbjct: 179 P 179
>gi|84515155|ref|ZP_01002518.1| hypothetical protein SKA53_13063 [Loktanella vestfoldensis SKA53]
gi|84511314|gb|EAQ07768.1| hypothetical protein SKA53_13063 [Loktanella vestfoldensis SKA53]
Length = 187
Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats.
Identities = 96/181 (53%), Positives = 136/181 (75%), Gaps = 2/181 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA+++ALGFDIDY+ L + F R ++RA+YYT ++ + E +
Sbjct: 1 MFYRDERLALFIDGSNLYAAARALGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWLHYNG+ ++ K AKEFT++ GR++VK +MD+ELAVDA E + L+H VIFS
Sbjct: 59 SPIRPLVDWLHYNGYSMITKPAKEFTDSLGRRKVKGNMDIELAVDAMELTPYLDHAVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG F L+ ALQRK +V++VST+ S P M +D+LRRQAD F++L L++ I R E
Sbjct: 119 GDGDFRPLIEALQRKGVRVSVVSTIRSQPPMIADELRRQADNFIELEELRDVIGRPAREP 178
Query: 181 K 181
+
Sbjct: 179 R 179
>gi|299135108|ref|ZP_07028299.1| protein of unknown function DUF88 [Afipia sp. 1NLS2]
gi|298590085|gb|EFI50289.1| protein of unknown function DUF88 [Afipia sp. 1NLS2]
Length = 212
Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats.
Identities = 99/179 (55%), Positives = 137/179 (76%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
M P KIALFIDGANLYA++K LGFDIDY++LL F++R ++RA+YYT ++ D Q++
Sbjct: 1 MTSPSHKIALFIDGANLYATAKTLGFDIDYKRLLLEFQNRGTLVRAFYYTAIIED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++H+V+FS
Sbjct: 59 SSIRPLIDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDHMVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F +LV A+QR+ +VT+VST+ S P M +D+LRRQAD F DL L++++ RDP E
Sbjct: 119 GDGDFRSLVEAVQRRGVRVTVVSTISSQPPMIADELRRQADVFTDLVQLQSKLGRDPGE 177
>gi|126726103|ref|ZP_01741945.1| hypothetical protein RB2150_07843 [Rhodobacterales bacterium
HTCC2150]
gi|126705307|gb|EBA04398.1| hypothetical protein RB2150_07843 [Rhodobacterales bacterium
HTCC2150]
Length = 191
Score = 254 bits (650), Expect = 4e-66, Method: Composition-based stats.
Identities = 94/182 (51%), Positives = 138/182 (75%), Gaps = 2/182 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA++K+LGFDIDY+ L F R ++RA+YYT ++ + E +
Sbjct: 1 MFYRDERLALFIDGSNLYAAAKSLGFDIDYKLLRTEFMRRGKLLRAFYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS
Sbjct: 59 SPIRPLVDWLHYNGFNMVTKPAKEYTDSQGRRKVKGNMDIELTVDALELAPHVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG F ++AA+QR+ +V++VST+ S+P M SD+LRRQAD F++L LK+ + R P E
Sbjct: 119 GDGDFRPMIAAVQRQGVRVSVVSTIRSNPPMISDELRRQADNFIELDELKDVVGRPPREM 178
Query: 181 KK 182
+
Sbjct: 179 PE 180
>gi|149200815|ref|ZP_01877790.1| hypothetical protein RTM1035_14357 [Roseovarius sp. TM1035]
gi|149145148|gb|EDM33174.1| hypothetical protein RTM1035_14357 [Roseovarius sp. TM1035]
Length = 190
Score = 254 bits (650), Expect = 4e-66, Method: Composition-based stats.
Identities = 96/179 (53%), Positives = 134/179 (74%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA+ KALGFDIDY+ L F R ++RA+YYT ++ + E +
Sbjct: 1 MFYKDERLALFIDGSNLYAAGKALGFDIDYKLLRSEFMRRGKLLRAFYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWLHYNG+ +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS
Sbjct: 59 SPIRPLVDWLHYNGYSMVTKPAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHVVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F LV +LQR+ +V++VST+ S P M SD LRRQAD F++LA LK+ I R P +
Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMISDDLRRQADNFIELADLKDVIGRPPRD 177
>gi|260462331|ref|ZP_05810539.1| protein of unknown function DUF88 [Mesorhizobium opportunistum
WSM2075]
gi|259031825|gb|EEW33093.1| protein of unknown function DUF88 [Mesorhizobium opportunistum
WSM2075]
Length = 193
Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats.
Identities = 116/181 (64%), Positives = 146/181 (80%), Gaps = 2/181 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFDPREKIALFIDGANLYA+S+ALGFDIDYRKLL +F+ R ++RAYYYT +V D Q++
Sbjct: 1 MFDPREKIALFIDGANLYATSRALGFDIDYRKLLSSFQKRGYLLRAYYYTALVED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNGF+VV K AKEFT++ GR+++K +MD+EL VDA E ++ ++H VIFS
Sbjct: 59 SSIRPLIDWLDYNGFKVVTKPAKEFTDSTGRRKIKGNMDIELTVDALELADVVDHYVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG F TLV ALQR+ +KV+IVST+ S P M SD LRRQAD+F+DL LKNE+ RDP E
Sbjct: 119 GDGDFRTLVEALQRRGRKVSIVSTMASQPPMISDDLRRQADHFIDLVTLKNEVGRDPSER 178
Query: 181 K 181
Sbjct: 179 P 179
>gi|182679399|ref|YP_001833545.1| hypothetical protein Bind_2447 [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182635282|gb|ACB96056.1| protein of unknown function DUF88 [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 203
Score = 254 bits (649), Expect = 4e-66, Method: Composition-based stats.
Identities = 101/179 (56%), Positives = 142/179 (79%), Gaps = 3/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
M P E+IALFIDGANLYA++K+LGFDIDY++LLK F+S+ +IRA+YYT +V D Q++
Sbjct: 1 MSHP-ERIALFIDGANLYATAKSLGFDIDYKRLLKEFQSKGKLIRAFYYTALVED--QEY 57
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG+ VV K KEF ++ GR++VK +MD+ELAVDA E +E L+H+V+FS
Sbjct: 58 SSIRPLIDWLDYNGYSVVTKPTKEFVDSLGRRKVKGNMDIELAVDAMEMAEHLDHIVLFS 117
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F +LV A+QRK +V++VST + P+M +D+LRRQAD F+DL +L ++I R+ +E
Sbjct: 118 GDGDFRSLVEAVQRKGVRVSVVSTNTTQPAMVADELRRQADEFIDLIHLASKIGREQNE 176
>gi|163744864|ref|ZP_02152224.1| hypothetical protein OIHEL45_04735 [Oceanibulbus indolifex HEL-45]
gi|161381682|gb|EDQ06091.1| hypothetical protein OIHEL45_04735 [Oceanibulbus indolifex HEL-45]
Length = 184
Score = 254 bits (649), Expect = 5e-66, Method: Composition-based stats.
Identities = 96/180 (53%), Positives = 135/180 (75%), Gaps = 2/180 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + E +
Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWL+YNGF +V K AKE+T++ GR++VK MD+ELAVDA E + ++H+VIFS
Sbjct: 59 SPIRPLVDWLNYNGFSMVTKPAKEYTDSMGRRKVKGDMDIELAVDAMELAPRVDHIVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG F LV +LQR+ +V++VST+ S P M SD LRRQAD F++L L++ I R P +
Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMISDDLRRQADNFIELDDLRDVIGRPPRDP 178
>gi|254439991|ref|ZP_05053485.1| conserved hypothetical protein [Octadecabacter antarcticus 307]
gi|198255437|gb|EDY79751.1| conserved hypothetical protein [Octadecabacter antarcticus 307]
Length = 195
Score = 253 bits (647), Expect = 8e-66, Method: Composition-based stats.
Identities = 97/182 (53%), Positives = 135/182 (74%), Gaps = 2/182 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF EK+ALFIDG+NLYAS+K+LGFDIDY+ L F R ++RAYYYT ++ + E +
Sbjct: 1 MFYRDEKLALFIDGSNLYASAKSLGFDIDYKLLRAEFMRRGKMLRAYYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWL+YNGF +V K AKEFT++ GR+++K +MD+ELAVDA E + ++H+VIFS
Sbjct: 59 SPIRPLVDWLNYNGFTMVTKPAKEFTDSMGRRKIKGNMDIELAVDALELAPHVDHIVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG F LV +LQRK +V++VST+ S P M +D+LRRQ D F++L L++ I R E
Sbjct: 119 GDGDFRPLVESLQRKGVRVSVVSTIRSQPPMIADELRRQCDNFIELDELRDVIGRPVREA 178
Query: 181 KK 182
+
Sbjct: 179 PR 180
>gi|323137551|ref|ZP_08072628.1| protein of unknown function DUF88 [Methylocystis sp. ATCC 49242]
gi|322397177|gb|EFX99701.1| protein of unknown function DUF88 [Methylocystis sp. ATCC 49242]
Length = 203
Score = 253 bits (647), Expect = 8e-66, Method: Composition-based stats.
Identities = 96/177 (54%), Positives = 140/177 (79%), Gaps = 2/177 (1%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
E+IALFIDGANLYA++K+LGFDIDY++LL+ F+ + +IRA+YYT ++ D Q++S + P
Sbjct: 5 ERIALFIDGANLYATAKSLGFDIDYKRLLREFQGKGRLIRAFYYTALIED--QEYSSIRP 62
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
L+DWL YNG+ VV K KEF ++ GR++VK +MD+ELAVDA E +E ++H+V+FSGDG F
Sbjct: 63 LIDWLDYNGYAVVTKPTKEFVDSLGRRKVKGNMDIELAVDAMEMAEHIDHMVLFSGDGDF 122
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182
+LV A+QRK +V+++ST+ + P M +D+LRRQAD F+DL +L ++I RDP E +
Sbjct: 123 RSLVEAVQRKGVRVSVISTITTQPPMIADELRRQADEFIDLIHLVSKIGRDPGERAE 179
>gi|307322278|ref|ZP_07601643.1| protein of unknown function DUF88 [Sinorhizobium meliloti AK83]
gi|306892060|gb|EFN22881.1| protein of unknown function DUF88 [Sinorhizobium meliloti AK83]
Length = 196
Score = 253 bits (646), Expect = 9e-66, Method: Composition-based stats.
Identities = 115/179 (64%), Positives = 147/179 (82%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFDPREKIALFIDGANL+A+SK+LGFDIDY KLL+AFR+RA ++RAYYYT ++ D E F
Sbjct: 1 MFDPREKIALFIDGANLFAASKSLGFDIDYCKLLQAFRNRAYLLRAYYYTAIIEDLE--F 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG+ VV K AKEFT+ GR+++K +MD+ELA+DA EQS +HLVIFS
Sbjct: 59 SSIRPLIDWLDYNGYTVVTKPAKEFTDAQGRRKIKGNMDIELAIDAMEQSRTADHLVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG FTTLV LQRK +KV++VST+ + P M +D+LRRQAD+F+DLA L++EI R P +
Sbjct: 119 GDGDFTTLVETLQRKGRKVSVVSTMSTQPPMIADELRRQADHFIDLASLRSEIDRHPRD 177
>gi|163852608|ref|YP_001640651.1| hypothetical protein Mext_3193 [Methylobacterium extorquens PA1]
gi|218531449|ref|YP_002422265.1| hypothetical protein Mchl_3517 [Methylobacterium chloromethanicum
CM4]
gi|254562365|ref|YP_003069460.1| hypothetical protein METDI3980 [Methylobacterium extorquens DM4]
gi|163664213|gb|ABY31580.1| protein of unknown function DUF88 [Methylobacterium extorquens PA1]
gi|218523752|gb|ACK84337.1| protein of unknown function DUF88 [Methylobacterium
chloromethanicum CM4]
gi|254269643|emb|CAX25615.1| conserved hypothethical protein (DUF88) [Methylobacterium
extorquens DM4]
Length = 218
Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats.
Identities = 96/177 (54%), Positives = 141/177 (79%), Gaps = 2/177 (1%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
+++ A+FIDGANLYA++KALGFDIDY++LLK F+SR +IRA+YYT ++ D Q++S
Sbjct: 2 SDKQRTAVFIDGANLYATTKALGFDIDYKRLLKDFQSRDNLIRAFYYTAMIED--QEYSS 59
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
+ PL+DWL YNG++VV K KEFT++ GR+++K +MD+ELA+DA E + ++H+V+FSGD
Sbjct: 60 IRPLIDWLDYNGYRVVTKPVKEFTDSAGRRKIKGNMDIELAIDALELAPHIDHMVLFSGD 119
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
G F +LV A+QR+ +V++VST+ + P+M +D LRRQAD F+DLA+L + I RDP E
Sbjct: 120 GDFRSLVEAIQRRGVRVSVVSTIQTQPAMIADDLRRQADEFIDLAHLASRIGRDPSE 176
>gi|307313917|ref|ZP_07593532.1| protein of unknown function DUF88 [Sinorhizobium meliloti BL225C]
gi|306899191|gb|EFN29829.1| protein of unknown function DUF88 [Sinorhizobium meliloti BL225C]
Length = 196
Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats.
Identities = 115/179 (64%), Positives = 147/179 (82%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFDPREKIALFIDGANL+A+SK+LGFDIDY KLL+AFR+RA ++RAYYYT ++ D E F
Sbjct: 1 MFDPREKIALFIDGANLFAASKSLGFDIDYCKLLEAFRNRAYLLRAYYYTAIIEDLE--F 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG+ VV K AKEFT+ GR+++K +MD+ELA+DA EQS +HLVIFS
Sbjct: 59 SSIRPLIDWLDYNGYTVVTKPAKEFTDAQGRRKIKGNMDIELAIDAMEQSRTADHLVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG FTTLV LQRK +KV++VST+ + P M +D+LRRQAD+F+DLA L++EI R P +
Sbjct: 119 GDGDFTTLVETLQRKGRKVSVVSTMSTQPPMIADELRRQADHFIDLASLRSEIDRHPRD 177
>gi|256060778|ref|ZP_05450940.1| hypothetical protein Bneo5_10505 [Brucella neotomae 5K33]
gi|256369087|ref|YP_003106595.1| hypothetical protein BMI_I648 [Brucella microti CCM 4915]
gi|261324768|ref|ZP_05963965.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|306842086|ref|ZP_07474758.1| cytoplasmic protein [Brucella sp. BO2]
gi|306845250|ref|ZP_07477826.1| cytoplasmic protein [Brucella sp. BO1]
gi|255999247|gb|ACU47646.1| hypothetical protein BMI_I648 [Brucella microti CCM 4915]
gi|261300748|gb|EEY04245.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|306274409|gb|EFM56216.1| cytoplasmic protein [Brucella sp. BO1]
gi|306287836|gb|EFM59259.1| cytoplasmic protein [Brucella sp. BO2]
Length = 191
Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats.
Identities = 114/179 (63%), Positives = 146/179 (81%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFD REKIALFIDGANLYA+SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++
Sbjct: 1 MFDSREKIALFIDGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS
Sbjct: 59 SSIRPLIDWLDYNGYKVVTKAAKEFTDSTGRRKVKGNMDIELTVDAMQLTDTVDHFVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E
Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSE 177
>gi|254780936|ref|YP_003065349.1| hypothetical protein CLIBASIA_04175 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040613|gb|ACT57409.1| hypothetical protein CLIBASIA_04175 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 182
Score = 252 bits (645), Expect = 1e-65, Method: Composition-based stats.
Identities = 182/182 (100%), Positives = 182/182 (100%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF
Sbjct: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS
Sbjct: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED
Sbjct: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
Query: 181 KK 182
KK
Sbjct: 181 KK 182
>gi|296444871|ref|ZP_06886833.1| protein of unknown function DUF88 [Methylosinus trichosporium OB3b]
gi|296257539|gb|EFH04604.1| protein of unknown function DUF88 [Methylosinus trichosporium OB3b]
Length = 202
Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats.
Identities = 101/182 (55%), Positives = 143/182 (78%), Gaps = 3/182 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
M DP E+IALFIDGANLYA++K+LGFDIDY++LL+ F+SR +IRA+YYT ++ D Q++
Sbjct: 1 MADP-ERIALFIDGANLYATAKSLGFDIDYKRLLREFQSRGRLIRAFYYTALIED--QEY 57
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG+ VV K KEF ++ GR++VK +MD+ELAVDA E +E ++HLV+FS
Sbjct: 58 SSIRPLIDWLDYNGYAVVTKPTKEFVDSLGRRKVKGNMDIELAVDAMEMAEHIDHLVLFS 117
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG F +LV A+QRK +V+++ST+ + P M +D+LRRQ+D F+DL +L +I RDP E
Sbjct: 118 GDGDFRSLVEAVQRKGVRVSVISTITTQPPMIADELRRQSDEFVDLIHLVGKIGRDPGER 177
Query: 181 KK 182
+
Sbjct: 178 AE 179
>gi|27380178|ref|NP_771707.1| hypothetical protein blr5067 [Bradyrhizobium japonicum USDA 110]
gi|27353332|dbj|BAC50332.1| blr5067 [Bradyrhizobium japonicum USDA 110]
Length = 214
Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats.
Identities = 99/179 (55%), Positives = 136/179 (75%), Gaps = 2/179 (1%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
P KIALFIDGANLYA++K LGFDIDY++LLK F+SR ++RA+YYT ++ D Q++S
Sbjct: 4 SPTNKIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLLRAFYYTAIIED--QEYSS 61
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
+ PL+DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FSGD
Sbjct: 62 IRPLIDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFSGD 121
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
G F +LV A+QR+ +VT+VST+ S P M +D+LRRQAD F DL L++++ RDP E
Sbjct: 122 GDFRSLVEAVQRRGVRVTVVSTIASQPPMIADELRRQADVFTDLVELQSKLGRDPSERP 180
>gi|110633298|ref|YP_673506.1| hypothetical protein Meso_0944 [Mesorhizobium sp. BNC1]
gi|110284282|gb|ABG62341.1| protein of unknown function DUF88 [Chelativorans sp. BNC1]
Length = 194
Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats.
Identities = 111/181 (61%), Positives = 146/181 (80%), Gaps = 2/181 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFDPREKIA+FIDGANLYA+S++LGFDIDYRKLL +F+ RA ++RAYYYT +V D Q++
Sbjct: 1 MFDPREKIAMFIDGANLYATSRSLGFDIDYRKLLASFQKRAYLLRAYYYTALVED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+EL +DA + ++H VIFS
Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSTGRRKIKGNMDIELTIDALGLVDVVDHYVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG F TLV ALQR+ +KV+IVST+ S P M SD+LRRQAD+F+DLA L+ E+ RDP E
Sbjct: 119 GDGDFRTLVEALQRRGRKVSIVSTIQSQPPMISDELRRQADHFIDLATLQTEVGRDPSER 178
Query: 181 K 181
Sbjct: 179 P 179
>gi|62289609|ref|YP_221402.1| hypothetical protein BruAb1_0666 [Brucella abortus bv. 1 str.
9-941]
gi|82699537|ref|YP_414111.1| hypothetical protein BAB1_0669 [Brucella melitensis biovar Abortus
2308]
gi|189023863|ref|YP_001934631.1| hypothetical protein BAbS19_I06260 [Brucella abortus S19]
gi|237815104|ref|ZP_04594102.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|254688926|ref|ZP_05152180.1| hypothetical protein Babob68_01821 [Brucella abortus bv. 6 str.
870]
gi|254693408|ref|ZP_05155236.1| hypothetical protein Babob3T_01839 [Brucella abortus bv. 3 str.
Tulya]
gi|254697060|ref|ZP_05158888.1| hypothetical protein Babob28_04920 [Brucella abortus bv. 2 str.
86/8/59]
gi|254729957|ref|ZP_05188535.1| hypothetical protein Babob42_01839 [Brucella abortus bv. 4 str.
292]
gi|256257174|ref|ZP_05462710.1| hypothetical protein Babob9C_07408 [Brucella abortus bv. 9 str.
C68]
gi|260545634|ref|ZP_05821375.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260754412|ref|ZP_05866760.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260757631|ref|ZP_05869979.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260761458|ref|ZP_05873801.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260883440|ref|ZP_05895054.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|261213658|ref|ZP_05927939.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|297248021|ref|ZP_06931739.1| conserved hypothetical protein [Brucella abortus bv. 5 str. B3196]
gi|62195741|gb|AAX74041.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82615638|emb|CAJ10625.1| Protein of unknown function DUF88 [Brucella melitensis biovar
Abortus 2308]
gi|189019435|gb|ACD72157.1| Protein of unknown function DUF88 [Brucella abortus S19]
gi|237789941|gb|EEP64151.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|260097041|gb|EEW80916.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260667949|gb|EEX54889.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260671890|gb|EEX58711.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260674520|gb|EEX61341.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260872968|gb|EEX80037.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|260915265|gb|EEX82126.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|297175190|gb|EFH34537.1| conserved hypothetical protein [Brucella abortus bv. 5 str. B3196]
Length = 191
Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats.
Identities = 113/179 (63%), Positives = 146/179 (81%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFD REKIALFIDGANLYA+SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++
Sbjct: 1 MFDSREKIALFIDGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K A+EFT++ GR++VK +MD+EL VDA + ++ ++H VIFS
Sbjct: 59 SSIRPLIDWLDYNGYKVVTKAAREFTDSTGRRKVKGNMDIELTVDAMQLTDTVDHFVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E
Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSE 177
>gi|188582630|ref|YP_001926075.1| hypothetical protein Mpop_3389 [Methylobacterium populi BJ001]
gi|179346128|gb|ACB81540.1| protein of unknown function DUF88 [Methylobacterium populi BJ001]
Length = 217
Score = 251 bits (643), Expect = 2e-65, Method: Composition-based stats.
Identities = 97/179 (54%), Positives = 140/179 (78%), Gaps = 2/179 (1%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
+++ A+FIDGANLYA++KALGFDIDY++LLK F+SR +IRA+YYT ++ D Q++S
Sbjct: 2 SDKQRTAVFIDGANLYATTKALGFDIDYKRLLKDFQSRDNLIRAFYYTAMIED--QEYSS 59
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
+ PL+DWL YNG++VV K KEFT++ GR++VK +MD+ELA+DA E + ++H+V+FSGD
Sbjct: 60 IRPLIDWLDYNGYRVVTKPVKEFTDSAGRRKVKGNMDIELAIDALELAPYIDHMVLFSGD 119
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
G F +LV A+QR+ +V++VST+ + P+M +D LRRQAD F+DLA+L I RDP E
Sbjct: 120 GDFRSLVEAIQRRGVRVSVVSTIQTQPAMIADDLRRQADEFIDLAHLAGRIGRDPSERP 178
>gi|146341383|ref|YP_001206431.1| hypothetical protein BRADO4470 [Bradyrhizobium sp. ORS278]
gi|146194189|emb|CAL78210.1| conserved hypothetical protein with DNA-binding domain (DUF88)
[Bradyrhizobium sp. ORS278]
Length = 216
Score = 251 bits (643), Expect = 3e-65, Method: Composition-based stats.
Identities = 98/181 (54%), Positives = 136/181 (75%), Gaps = 2/181 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
M KIALFIDGANLYA++K LGFDIDY++LLK F+SR ++RA+YYT ++ D Q++
Sbjct: 1 MSSSTNKIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLLRAFYYTAIIED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FS
Sbjct: 59 SSIRPLIDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG F +LV A+QR+ +VT++ST+ S P M +D+LRRQAD F DL L++++ RDP E
Sbjct: 119 GDGDFRSLVEAMQRRGVRVTVISTISSQPPMIADELRRQADVFTDLVELQSKLGRDPSER 178
Query: 181 K 181
Sbjct: 179 P 179
>gi|254718792|ref|ZP_05180603.1| hypothetical protein Bru83_04498 [Brucella sp. 83/13]
gi|265983772|ref|ZP_06096507.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306837511|ref|ZP_07470386.1| cytoplasmic protein [Brucella sp. NF 2653]
gi|264662364|gb|EEZ32625.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306407403|gb|EFM63607.1| cytoplasmic protein [Brucella sp. NF 2653]
Length = 202
Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats.
Identities = 113/182 (62%), Positives = 146/182 (80%), Gaps = 2/182 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFD REKI LFIDGANLYA+SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++
Sbjct: 1 MFDSREKIVLFIDGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS
Sbjct: 59 SSIRPLIDWLDYNGYKVVTKAAKEFTDSTGRRKVKGNMDIELTVDAMQLTDTVDHFVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E
Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSER 178
Query: 181 KK 182
+
Sbjct: 179 AR 180
>gi|115525034|ref|YP_781945.1| hypothetical protein RPE_3028 [Rhodopseudomonas palustris BisA53]
gi|115518981|gb|ABJ06965.1| protein of unknown function DUF88 [Rhodopseudomonas palustris
BisA53]
Length = 209
Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats.
Identities = 97/175 (55%), Positives = 135/175 (77%), Gaps = 2/175 (1%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
KIALFIDGANLYA++K LGFDIDY++LLK F+SR ++RA+YYT ++ D Q++S + PL
Sbjct: 6 KIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLVRAFYYTAIIED--QEYSSIRPL 63
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126
+DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FSGDG F
Sbjct: 64 IDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHVDQIVLFSGDGDFR 123
Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
+LV A+QR+ +VT++ST+ S P M +D+LRRQAD F DL L++++ RDP E
Sbjct: 124 SLVEAVQRRGVRVTVISTISSQPPMIADELRRQADVFTDLVELQSKLGRDPAERP 178
>gi|312114934|ref|YP_004012530.1| hypothetical protein Rvan_2206 [Rhodomicrobium vannielii ATCC
17100]
gi|311220063|gb|ADP71431.1| hypothetical protein Rvan_2206 [Rhodomicrobium vannielii ATCC
17100]
Length = 210
Score = 251 bits (642), Expect = 3e-65, Method: Composition-based stats.
Identities = 99/177 (55%), Positives = 136/177 (76%), Gaps = 2/177 (1%)
Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
F E+IALFIDGANLYA++KALGFDIDY++LL FR++ +++RA YYT + EQ++S
Sbjct: 3 FYTTERIALFIDGANLYATAKALGFDIDYKRLLNLFRNKGVLLRALYYTALAE--EQEYS 60
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
+ PL+DWL YNG+ +V K KEFT+ GR+++K +MD+ELAVDA E SE L+H+++FSG
Sbjct: 61 SIRPLIDWLDYNGYSMVTKPTKEFTDASGRRKIKGNMDIELAVDAMELSEHLDHIILFSG 120
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
DG F TLV ALQ K K+V++VST+ + P M +D+LRRQAD F+DLA L+ +I R
Sbjct: 121 DGDFRTLVEALQHKGKRVSVVSTLTTQPPMVADELRRQADQFIDLADLQKDICRTQR 177
>gi|92117780|ref|YP_577509.1| hypothetical protein Nham_2257 [Nitrobacter hamburgensis X14]
gi|91800674|gb|ABE63049.1| protein of unknown function DUF88 [Nitrobacter hamburgensis X14]
Length = 206
Score = 251 bits (641), Expect = 3e-65, Method: Composition-based stats.
Identities = 99/179 (55%), Positives = 135/179 (75%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
M KIALFIDGANLYA++K LGFDIDY++LLK F+SR ++RA+YYT ++ D Q++
Sbjct: 1 MSSASNKIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLVRAFYYTAIIED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FS
Sbjct: 59 SSIRPLIDWLDYNGYTVVTKATKEFVDASGRRKVKGNMDIELAVDAMELAEHVDQIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F +LV A+QR+ +VT+VST+ S P M +D+LRRQAD F DL L+ ++ RDP E
Sbjct: 119 GDGDFRSLVEAVQRRGVRVTVVSTISSQPPMIADELRRQADVFTDLVELQPKLGRDPSE 177
>gi|254487193|ref|ZP_05100398.1| DUF88 [Roseobacter sp. GAI101]
gi|214044062|gb|EEB84700.1| DUF88 [Roseobacter sp. GAI101]
Length = 181
Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats.
Identities = 95/179 (53%), Positives = 134/179 (74%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA++K+LGFDIDY+ L + F R ++RA+YYT ++ + E +
Sbjct: 1 MFYKDERLALFIDGSNLYAAAKSLGFDIDYKLLRQEFMRRGKLLRAFYYTALLENEE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWL+YNGF +V K AKE+T++ GR++VK +MD+ELAVDA E + L+H+VIFS
Sbjct: 59 SPIRPLVDWLNYNGFSMVTKPAKEYTDSMGRRKVKGNMDIELAVDAMELAPHLDHIVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F LV +LQR+ +V++VST+ S P M SD LRRQ D F++L L++ I R E
Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMISDDLRRQVDNFIELEDLRDVIGRPARE 177
>gi|154253305|ref|YP_001414129.1| hypothetical protein Plav_2865 [Parvibaculum lavamentivorans DS-1]
gi|154157255|gb|ABS64472.1| protein of unknown function DUF88 [Parvibaculum lavamentivorans
DS-1]
Length = 206
Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats.
Identities = 99/181 (54%), Positives = 141/181 (77%), Gaps = 2/181 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+F P E+IALFIDGANLY++++ LGFDIDY++LL FRS+ +++RA+YYT ++ D Q++
Sbjct: 2 IFYPNERIALFIDGANLYSAARGLGFDIDYKRLLDHFRSKGVLVRAFYYTALLED--QEY 59
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SPL PL+DWL YNG+ VV K AKEFT+ GR+R+K +MD+ELA+DA E ++ L+HLV+FS
Sbjct: 60 SPLRPLIDWLDYNGYAVVTKPAKEFTDATGRRRIKGNMDIELAIDALEIADKLDHLVLFS 119
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG F LV A+QRK K+VT+VST+ S P M +D+LRRQAD +++L +++ I R +
Sbjct: 120 GDGDFRRLVDAVQRKGKRVTVVSTMRSQPPMIADELRRQADQYVELESMRDAIGRSHSDR 179
Query: 181 K 181
Sbjct: 180 P 180
>gi|119384144|ref|YP_915200.1| hypothetical protein Pden_1403 [Paracoccus denitrificans PD1222]
gi|119373911|gb|ABL69504.1| protein of unknown function DUF88 [Paracoccus denitrificans PD1222]
Length = 183
Score = 251 bits (641), Expect = 4e-65, Method: Composition-based stats.
Identities = 93/179 (51%), Positives = 134/179 (74%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF +++ALFIDG+NLYA++K+LGFDIDY+ L + F R +IRAYYYT ++ + + +
Sbjct: 1 MFYKDDRLALFIDGSNLYAAAKSLGFDIDYKLLRQEFERRGKLIRAYYYTALLENED--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWLHYNG+ +V K A+E+T+ GR++VK +MDVEL ++A E + L+H V+FS
Sbjct: 59 SPIRPLVDWLHYNGYSMVTKPAREYTDALGRRKVKGNMDVELVINAMELAPRLDHAVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F LV ALQR+ +V++VST+ S P M +D+LRRQAD F++L L++ I R P E
Sbjct: 119 GDGDFRPLVEALQRQGVRVSVVSTMRSQPPMIADELRRQADNFIELDALRDIIGRPPRE 177
>gi|90424132|ref|YP_532502.1| hypothetical protein RPC_2633 [Rhodopseudomonas palustris BisB18]
gi|90106146|gb|ABD88183.1| protein of unknown function DUF88 [Rhodopseudomonas palustris
BisB18]
Length = 208
Score = 250 bits (639), Expect = 7e-65, Method: Composition-based stats.
Identities = 98/181 (54%), Positives = 136/181 (75%), Gaps = 2/181 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
M KIALFIDGANLYA++K LGFDIDY++LLK F+SR ++RA+YYT ++ D Q++
Sbjct: 1 MSSASSKIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLVRAFYYTAIIED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FS
Sbjct: 59 SSIRPLIDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG F +LV A+QR+ +VT++ST+ S P M +D+LRRQAD F DL L++++ RDP E
Sbjct: 119 GDGDFRSLVEAVQRRGVRVTVISTISSQPPMIADELRRQADVFTDLVELQSKLGRDPAER 178
Query: 181 K 181
Sbjct: 179 P 179
>gi|23501536|ref|NP_697663.1| hypothetical protein BR0649 [Brucella suis 1330]
gi|161618620|ref|YP_001592507.1| hypothetical protein BCAN_A0662 [Brucella canis ATCC 23365]
gi|163842921|ref|YP_001627325.1| hypothetical protein BSUIS_A0677 [Brucella suis ATCC 23445]
gi|254703984|ref|ZP_05165812.1| hypothetical protein Bsuib36_08664 [Brucella suis bv. 3 str. 686]
gi|260566769|ref|ZP_05837239.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|261754636|ref|ZP_05998345.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|23347446|gb|AAN29578.1| conserved hypothetical protein [Brucella suis 1330]
gi|161335431|gb|ABX61736.1| Hypothetical protein BCAN_A0662 [Brucella canis ATCC 23365]
gi|163673644|gb|ABY37755.1| Hypothetical protein BSUIS_A0677 [Brucella suis ATCC 23445]
gi|260156287|gb|EEW91367.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|261744389|gb|EEY32315.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
Length = 191
Score = 250 bits (638), Expect = 9e-65, Method: Composition-based stats.
Identities = 113/179 (63%), Positives = 146/179 (81%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFD REKIALFI+GANLYA+SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++
Sbjct: 1 MFDSREKIALFINGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS
Sbjct: 59 SSIRPLIDWLDYNGYKVVTKAAKEFTDSTGRRKVKGNMDIELTVDAMQLTDTVDHFVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E
Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSE 177
>gi|75676115|ref|YP_318536.1| hypothetical protein Nwi_1924 [Nitrobacter winogradskyi Nb-255]
gi|74420985|gb|ABA05184.1| Protein of unknown function DUF88 [Nitrobacter winogradskyi Nb-255]
Length = 205
Score = 250 bits (638), Expect = 9e-65, Method: Composition-based stats.
Identities = 99/181 (54%), Positives = 136/181 (75%), Gaps = 2/181 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
M KIALFIDGANLYA++K LGFDIDY++LLK F+SR ++RA+YYT ++ D Q++
Sbjct: 1 MPSASNKIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLVRAFYYTAIIED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FS
Sbjct: 59 SSIRPLIDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHVDQIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG F +LV A+QR+ +VT+VST+ S P M +D+LRRQAD F DL L+ ++ RDP E
Sbjct: 119 GDGDFRSLVEAVQRRGVRVTVVSTIASQPPMIADELRRQADVFTDLVELQPKLGRDPSER 178
Query: 181 K 181
+
Sbjct: 179 Q 179
>gi|91977116|ref|YP_569775.1| hypothetical protein RPD_2645 [Rhodopseudomonas palustris BisB5]
gi|91683572|gb|ABE39874.1| protein of unknown function DUF88 [Rhodopseudomonas palustris
BisB5]
Length = 228
Score = 250 bits (638), Expect = 9e-65, Method: Composition-based stats.
Identities = 98/175 (56%), Positives = 135/175 (77%), Gaps = 2/175 (1%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
KIALFIDGANLYA++K LGFDIDY++LLK F+SR +IRA+YYT ++ D Q++S + PL
Sbjct: 27 KIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLIRAFYYTAIIED--QEYSSIRPL 84
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126
+DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FSGDG F
Sbjct: 85 IDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFSGDGDFR 144
Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
+LV A+QR+ +VT++ST+ S P M +D+LRRQAD F DL L+++I RDP +
Sbjct: 145 SLVEAVQRRGVRVTVISTISSQPPMIADELRRQADTFTDLVELQSKIGRDPADRP 199
>gi|239831485|ref|ZP_04679814.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239823752|gb|EEQ95320.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 191
Score = 250 bits (638), Expect = 9e-65, Method: Composition-based stats.
Identities = 113/181 (62%), Positives = 145/181 (80%), Gaps = 2/181 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFD REKIALFIDGANLYA+SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++
Sbjct: 1 MFDSREKIALFIDGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS
Sbjct: 59 SSIRPLIDWLDYNGYKVVTKAAKEFTDSTGRRKVKGNMDIELTVDAMQLTDTVDHFVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG F +L ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E
Sbjct: 119 GDGDFRSLAEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSER 178
Query: 181 K 181
Sbjct: 179 P 179
>gi|85715063|ref|ZP_01046047.1| hypothetical protein NB311A_00725 [Nitrobacter sp. Nb-311A]
gi|85697978|gb|EAQ35851.1| hypothetical protein NB311A_00725 [Nitrobacter sp. Nb-311A]
Length = 205
Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats.
Identities = 99/181 (54%), Positives = 136/181 (75%), Gaps = 2/181 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
M KIALFIDGANLYA++K LGFDIDY++LLK F+SR ++RA+YYT ++ D Q++
Sbjct: 1 MPSASNKIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLVRAFYYTAIIED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FS
Sbjct: 59 SSIRPLIDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHVDQIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG F +LV A+QR+ +VT+VST+ S P M +D+LRRQAD F DL L+ ++ RDP E
Sbjct: 119 GDGDFRSLVEAVQRRGVRVTVVSTIASQPPMIADELRRQADVFTDLVELQPKLGRDPSER 178
Query: 181 K 181
+
Sbjct: 179 Q 179
>gi|154247759|ref|YP_001418717.1| hypothetical protein Xaut_3836 [Xanthobacter autotrophicus Py2]
gi|154161844|gb|ABS69060.1| protein of unknown function DUF88 [Xanthobacter autotrophicus Py2]
Length = 202
Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats.
Identities = 101/176 (57%), Positives = 142/176 (80%), Gaps = 2/176 (1%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
EKIAL IDGANLY+++KALGFDIDY++LLK F+SR ++RA+YYTT++ D Q++S + P
Sbjct: 5 EKIALLIDGANLYSATKALGFDIDYKRLLKEFQSRGYLLRAFYYTTLIED--QEYSSIRP 62
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
LLDWL YNG+ VV K+A+EFT++ GR+RV+ +MD+E+AVDA E +E ++H+V+FSGDG F
Sbjct: 63 LLDWLDYNGYAVVTKLAREFTDSQGRRRVRGNMDIEIAVDAMELAEHVDHIVLFSGDGDF 122
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
+LV ALQRK +V++VST+ + P + +D LRRQAD F+DL L+ +I RDP E +
Sbjct: 123 RSLVEALQRKGVRVSVVSTISTQPPLIADDLRRQADVFIDLVDLQPKIGRDPSERQ 178
>gi|254713779|ref|ZP_05175590.1| hypothetical protein BcetM6_10570 [Brucella ceti M644/93/1]
gi|254717164|ref|ZP_05178975.1| hypothetical protein BcetM_12234 [Brucella ceti M13/05/1]
gi|261218981|ref|ZP_05933262.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261321520|ref|ZP_05960717.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|260924070|gb|EEX90638.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261294210|gb|EEX97706.1| conserved hypothetical protein [Brucella ceti M644/93/1]
Length = 191
Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats.
Identities = 114/179 (63%), Positives = 146/179 (81%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFD REKIALFIDGANLYA+SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++
Sbjct: 1 MFDSREKIALFIDGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS
Sbjct: 59 SSIRPLIDWLDYNGYKVVTKAAKEFTDSTGRRKVKGNMDIELTVDAKQLTDTVDHFVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E
Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSE 177
>gi|256159377|ref|ZP_05457159.1| hypothetical protein BcetM4_10523 [Brucella ceti M490/95/1]
gi|256254675|ref|ZP_05460211.1| hypothetical protein BcetB_10340 [Brucella ceti B1/94]
gi|261221851|ref|ZP_05936132.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|265997815|ref|ZP_06110372.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|260920435|gb|EEX87088.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|262552283|gb|EEZ08273.1| conserved hypothetical protein [Brucella ceti M490/95/1]
Length = 191
Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats.
Identities = 112/179 (62%), Positives = 144/179 (80%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFD REKIALFIDGANLYA+SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++
Sbjct: 1 MFDSREKIALFIDGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + P +DWL YNG++V K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS
Sbjct: 59 SSIRPFIDWLDYNGYKVGTKAAKEFTDSTGRRKVKGNMDIELTVDAKQLTDTVDHFVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E
Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSE 177
>gi|148256038|ref|YP_001240623.1| hypothetical protein BBta_4689 [Bradyrhizobium sp. BTAi1]
gi|146408211|gb|ABQ36717.1| hypothetical protein BBta_4689 [Bradyrhizobium sp. BTAi1]
Length = 217
Score = 249 bits (636), Expect = 1e-64, Method: Composition-based stats.
Identities = 98/181 (54%), Positives = 136/181 (75%), Gaps = 2/181 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
M KIALFIDGANLYA++K LGFDIDY++LLK F+SR ++RA+YYT ++ D Q++
Sbjct: 1 MSSSTNKIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLLRAFYYTAIIED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FS
Sbjct: 59 SSIRPLIDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG F +LV A+QR+ +VT++ST+ S P M +D+LRRQAD F DL L++++ RDP E
Sbjct: 119 GDGDFRSLVEAMQRRGVRVTVISTISSQPPMIADELRRQADVFTDLVELQSKLGRDPSER 178
Query: 181 K 181
Sbjct: 179 P 179
>gi|328543520|ref|YP_004303629.1| RtsE [polymorphum gilvum SL003B-26A1]
gi|326413264|gb|ADZ70327.1| RtsE [Polymorphum gilvum SL003B-26A1]
Length = 195
Score = 248 bits (635), Expect = 2e-64, Method: Composition-based stats.
Identities = 100/181 (55%), Positives = 141/181 (77%), Gaps = 2/181 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFD REKIALFIDGANLY+++KA+GFDIDY+ LLK F+ + ++RAYYYT ++ D Q++
Sbjct: 1 MFDSREKIALFIDGANLYSTAKAIGFDIDYKMLLKEFQGKGYLLRAYYYTAIIED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++V+ K KEF + GR++VK +MD+ELAVDA + + ++H+V+FS
Sbjct: 59 SSIRPLIDWLDYNGYKVITKPVKEFVDASGRRKVKGNMDIELAVDAMQIVDHVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG F +LV ALQRK +KV++VST+ + P M +D LRRQAD+F+DLA L ++ RDP +
Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLQTQPPMIADDLRRQADHFIDLATLAAKVGRDPADR 178
Query: 181 K 181
Sbjct: 179 P 179
>gi|89053002|ref|YP_508453.1| hypothetical protein Jann_0511 [Jannaschia sp. CCS1]
gi|88862551|gb|ABD53428.1| protein of unknown function DUF88 [Jannaschia sp. CCS1]
Length = 191
Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats.
Identities = 94/174 (54%), Positives = 128/174 (73%), Gaps = 2/174 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDG+NLYA++KALGFDIDY+ L F R ++RA YYT ++ + + +
Sbjct: 1 MFYRDERLALFIDGSNLYAAAKALGFDIDYKLLRSEFMQRGKLLRANYYTALLENDD--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWLHYNGF +V K AKEF ++ GR++VK +MD+ELAVDA E + ++H+VIFS
Sbjct: 59 SPIRPLVDWLHYNGFNMVTKPAKEFVDSQGRRKVKGNMDIELAVDAMETAPHVDHIVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
GDG F LV +LQRK +V++VST+ S P M +D LRRQ D F++L LK I
Sbjct: 119 GDGDFRPLVESLQRKGCRVSVVSTIRSQPPMIADDLRRQCDNFIELLDLKEAIG 172
>gi|159042747|ref|YP_001531541.1| hypothetical protein Dshi_0191 [Dinoroseobacter shibae DFL 12]
gi|157910507|gb|ABV91940.1| protein of unknown function DUF88 [Dinoroseobacter shibae DFL 12]
Length = 190
Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats.
Identities = 93/174 (53%), Positives = 132/174 (75%), Gaps = 2/174 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF +++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + E +
Sbjct: 1 MFYKDDRLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLENDE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+ELAVDA E + ++H V+FS
Sbjct: 59 SPIRPLVDWLHYNGFSMVTKPAKEYTDSQGRRKVKGNMDIELAVDAMELAPHMDHAVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
GDG F L+ +LQR+ +V++VST+ S P M SD+LRRQAD F++L LK I
Sbjct: 119 GDGDFRPLIESLQRRGVRVSVVSTIRSHPPMISDELRRQADNFIELDELKEIIG 172
>gi|86749724|ref|YP_486220.1| hypothetical protein RPB_2606 [Rhodopseudomonas palustris HaA2]
gi|86572752|gb|ABD07309.1| Protein of unknown function DUF88 [Rhodopseudomonas palustris HaA2]
Length = 209
Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats.
Identities = 98/175 (56%), Positives = 134/175 (76%), Gaps = 2/175 (1%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
KIALFIDGANLYA++K LGFDIDY++LLK F SR +IRA+YYT ++ D Q++S + PL
Sbjct: 8 KIALFIDGANLYATAKTLGFDIDYKRLLKEFHSRGTLIRAFYYTAIIED--QEYSSIRPL 65
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126
+DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FSGDG F
Sbjct: 66 IDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFSGDGDFR 125
Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
+LV A+QR+ +VT++ST+ S P M +D+LRRQAD F DL L+++I RDP +
Sbjct: 126 SLVEAVQRRGVRVTVISTISSQPPMIADELRRQADVFTDLVELQSKIGRDPADRP 180
>gi|158422876|ref|YP_001524168.1| hypothetical protein AZC_1252 [Azorhizobium caulinodans ORS 571]
gi|158329765|dbj|BAF87250.1| uncharacterized conserved protein [Azorhizobium caulinodans ORS
571]
Length = 201
Score = 248 bits (633), Expect = 3e-64, Method: Composition-based stats.
Identities = 104/175 (59%), Positives = 141/175 (80%), Gaps = 2/175 (1%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
EKIALFIDGANLY+++KALGFDIDY++LLK F+SR ++RA+YYTT+V D Q++S +
Sbjct: 4 MEKIALFIDGANLYSATKALGFDIDYKRLLKEFQSRGYLLRAFYYTTLVED--QEYSSIR 61
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
PLLDWL YNG+ VV K+A+EFT++ GR+RV+ +MD+E+AVDA E + L+H+V+FSGDG
Sbjct: 62 PLLDWLDYNGYSVVTKLAREFTDSQGRRRVRGNMDIEIAVDAMELAGSLDHIVLFSGDGD 121
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
F +LV ALQRK +V++VST+ + P + SD LRRQAD F+DL L+ +I RDP E
Sbjct: 122 FRSLVEALQRKGVRVSVVSTISTQPPLISDDLRRQADVFIDLVDLQAKIGRDPAE 176
>gi|225627151|ref|ZP_03785189.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|254707641|ref|ZP_05169469.1| hypothetical protein BpinM_11896 [Brucella pinnipedialis
M163/99/10]
gi|254709777|ref|ZP_05171588.1| hypothetical protein BpinB_05796 [Brucella pinnipedialis B2/94]
gi|256031267|ref|ZP_05444881.1| hypothetical protein BpinM2_11548 [Brucella pinnipedialis
M292/94/1]
gi|260168403|ref|ZP_05755214.1| hypothetical protein BruF5_08553 [Brucella sp. F5/99]
gi|261315135|ref|ZP_05954332.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261317309|ref|ZP_05956506.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261757864|ref|ZP_06001573.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|265988348|ref|ZP_06100905.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|225617986|gb|EEH15030.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|261296532|gb|EEY00029.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261304161|gb|EEY07658.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261737848|gb|EEY25844.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|264660545|gb|EEZ30806.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
Length = 191
Score = 248 bits (633), Expect = 3e-64, Method: Composition-based stats.
Identities = 113/179 (63%), Positives = 145/179 (81%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFD REKIALFIDGANLYA+SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++
Sbjct: 1 MFDSREKIALFIDGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++V K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS
Sbjct: 59 SSIRPLIDWLDYNGYKVGTKAAKEFTDSTGRRKVKGNMDIELTVDAKQLTDTVDHFVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E
Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSE 177
>gi|153009965|ref|YP_001371180.1| hypothetical protein Oant_2638 [Ochrobactrum anthropi ATCC 49188]
gi|151561853|gb|ABS15351.1| protein of unknown function DUF88 [Ochrobactrum anthropi ATCC
49188]
Length = 191
Score = 247 bits (632), Expect = 4e-64, Method: Composition-based stats.
Identities = 113/179 (63%), Positives = 145/179 (81%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFD REKIALFIDGANLYA+SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++
Sbjct: 1 MFDSREKIALFIDGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS
Sbjct: 59 SSIRPLIDWLDYNGYKVVTKAAKEFTDSTGRRKVKGNMDIELTVDAMQLTDTVDHFVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F +L ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E
Sbjct: 119 GDGDFRSLAEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSE 177
>gi|39935757|ref|NP_948033.1| hypothetical protein RPA2691 [Rhodopseudomonas palustris CGA009]
gi|192291344|ref|YP_001991949.1| hypothetical protein Rpal_2966 [Rhodopseudomonas palustris TIE-1]
gi|39649610|emb|CAE28132.1| DUF88 [Rhodopseudomonas palustris CGA009]
gi|192285093|gb|ACF01474.1| protein of unknown function DUF88 [Rhodopseudomonas palustris
TIE-1]
Length = 216
Score = 247 bits (632), Expect = 4e-64, Method: Composition-based stats.
Identities = 97/177 (54%), Positives = 135/177 (76%), Gaps = 2/177 (1%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
KIALFIDGANLYA++K LGFDIDY++LLK F+SR ++RA+YYT ++ D Q++S
Sbjct: 4 SSSNKIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGNLVRAFYYTAIIED--QEYSS 61
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
+ PL+DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FSGD
Sbjct: 62 IRPLIDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFSGD 121
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
G F +LV A+QR+ +VT++ST+ S P M +D+LRRQAD F DL L+++I RDP +
Sbjct: 122 GDFRSLVEAVQRRGVRVTVISTISSQPPMIADELRRQADIFTDLVELQSKIGRDPAD 178
>gi|288958017|ref|YP_003448358.1| hypothetical protein AZL_011760 [Azospirillum sp. B510]
gi|288910325|dbj|BAI71814.1| hypothetical protein AZL_011760 [Azospirillum sp. B510]
Length = 200
Score = 247 bits (632), Expect = 4e-64, Method: Composition-based stats.
Identities = 90/176 (51%), Positives = 130/176 (73%), Gaps = 2/176 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E++ALFIDGANLYA++++LGFDIDY++L F ++RA+YYT +V D Q++
Sbjct: 1 MFYKEERLALFIDGANLYAAARSLGFDIDYKRLRDGFAGEGRLVRAFYYTALVED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWL YNG+ +V K KEFT+ GR+++K +MD+ELA+D E ++ ++H+++FS
Sbjct: 59 SPIRPLVDWLDYNGYTMVTKPTKEFTDASGRRKIKGNMDIELAIDVMEMADHVDHILLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
GDG F LV A+QRK + ++VSTV S P M +D+LRRQAD F++L L IAR
Sbjct: 119 GDGDFRRLVEAVQRKGVRFSVVSTVRSQPPMVADELRRQADNFIELQELAPFIART 174
>gi|17987581|ref|NP_540215.1| putative cytoplasmic protein [Brucella melitensis bv. 1 str. 16M]
gi|225852170|ref|YP_002732403.1| hypothetical protein BMEA_A0686 [Brucella melitensis ATCC 23457]
gi|256044347|ref|ZP_05447251.1| hypothetical protein Bmelb1R_07603 [Brucella melitensis bv. 1 str.
Rev.1]
gi|256113190|ref|ZP_05454058.1| hypothetical protein Bmelb3E_10777 [Brucella melitensis bv. 3 str.
Ether]
gi|256264318|ref|ZP_05466850.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|260563699|ref|ZP_05834185.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|265990761|ref|ZP_06103318.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|265994597|ref|ZP_06107154.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|17983287|gb|AAL52479.1| hypothetical cytosolic protein [Brucella melitensis bv. 1 str. 16M]
gi|225640535|gb|ACO00449.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457]
gi|260153715|gb|EEW88807.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|262765710|gb|EEZ11499.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|263001545|gb|EEZ14120.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|263094592|gb|EEZ18390.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|326408671|gb|ADZ65736.1| putative cytoplasmic protein [Brucella melitensis M28]
gi|326538396|gb|ADZ86611.1| conserved hypothetical protein [Brucella melitensis M5-90]
Length = 191
Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats.
Identities = 112/179 (62%), Positives = 145/179 (81%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFD REKIALFIDGANLYA+SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++
Sbjct: 1 MFDSREKIALFIDGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K A+EFT++ GR++VK +MD+EL VDA + ++ ++H VIFS
Sbjct: 59 SSIRPLIDWLDYNGYKVVTKAAREFTDSTGRRKVKGNMDIELTVDAMQLTDTVDHFVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
G G F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E
Sbjct: 119 GYGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSE 177
>gi|254701438|ref|ZP_05163266.1| hypothetical protein Bsuib55_11349 [Brucella suis bv. 5 str. 513]
gi|261751977|ref|ZP_05995686.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261741730|gb|EEY29656.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
Length = 191
Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats.
Identities = 112/179 (62%), Positives = 145/179 (81%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFD REKIALFI+GANLY +SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++
Sbjct: 1 MFDSREKIALFINGANLYTASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS
Sbjct: 59 SSIRPLIDWLDYNGYKVVTKAAKEFTDSTGRRKVKGNMDLELTVDAMQLTDTVDHFVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E
Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSE 177
>gi|294852014|ref|ZP_06792687.1| hypothetical protein BAZG_00929 [Brucella sp. NVSL 07-0026]
gi|294820603|gb|EFG37602.1| hypothetical protein BAZG_00929 [Brucella sp. NVSL 07-0026]
Length = 191
Score = 247 bits (631), Expect = 5e-64, Method: Composition-based stats.
Identities = 112/179 (62%), Positives = 144/179 (80%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF REKIALFID ANLYA+SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++
Sbjct: 1 MFGSREKIALFIDDANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS
Sbjct: 59 SSIRPLIDWLDYNGYKVVTKAAKEFTDSTGRRKVKGNMDIELTVDAMQLTDTVDHFVIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E
Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSE 177
>gi|163793037|ref|ZP_02187013.1| hypothetical protein BAL199_24649 [alpha proteobacterium BAL199]
gi|159181683|gb|EDP66195.1| hypothetical protein BAL199_24649 [alpha proteobacterium BAL199]
Length = 218
Score = 247 bits (631), Expect = 5e-64, Method: Composition-based stats.
Identities = 98/175 (56%), Positives = 137/175 (78%), Gaps = 2/175 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+F P EK+ALFIDGANLY++++ALGFDIDY++LL F S+A +IRA+YYT ++ D Q++
Sbjct: 2 LFYPHEKVALFIDGANLYSAARALGFDIDYKRLLVLFGSKANLIRAFYYTALLED--QEY 59
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWL YNG+ +V K AKEFT++ GR+R+K +MD+ELAVD E + L+H+V+FS
Sbjct: 60 SPIRPLVDWLDYNGYSLVTKPAKEFTDSQGRRRIKGNMDIELAVDMMEMVDRLDHVVLFS 119
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
GDG F +L+ A+QRK + T+VST+ S P M +D+LRRQAD F+DL L +I R
Sbjct: 120 GDGDFRSLIEAVQRKGVRATVVSTIRSSPPMIADELRRQADQFIDLDQLAGDIER 174
>gi|114706254|ref|ZP_01439156.1| hypothetical protein FP2506_00680 [Fulvimarina pelagi HTCC2506]
gi|114538115|gb|EAU41237.1| hypothetical protein FP2506_00680 [Fulvimarina pelagi HTCC2506]
Length = 199
Score = 247 bits (631), Expect = 6e-64, Method: Composition-based stats.
Identities = 108/179 (60%), Positives = 141/179 (78%), Gaps = 2/179 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFD REKIALFIDGANLYA+S+ LGFDIDY+K+L F +A ++RAYYYT ++ D Q++
Sbjct: 1 MFDQREKIALFIDGANLYAASRNLGFDIDYKKMLTFFEKKAYLLRAYYYTALIED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K AKEFT+ GR++VK +MD+ELA+DA E S+ ++H V+FS
Sbjct: 59 SSIRPLIDWLDYNGYRVVTKPAKEFTDQTGRRKVKGNMDIELAIDAMELSDTVDHFVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG F +LV ALQRK +KV++VST+ + P M SD LRRQAD+F+DL LKNEI R E
Sbjct: 119 GDGDFRSLVDALQRKGRKVSVVSTLATQPPMISDDLRRQADHFIDLTSLKNEIGRSQAE 177
>gi|209884968|ref|YP_002288825.1| DUF88 [Oligotropha carboxidovorans OM5]
gi|209873164|gb|ACI92960.1| DUF88 [Oligotropha carboxidovorans OM5]
Length = 213
Score = 246 bits (630), Expect = 6e-64, Method: Composition-based stats.
Identities = 98/177 (55%), Positives = 134/177 (75%), Gaps = 2/177 (1%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
KIALFIDGANLYA++K LGFDIDY++LL F+SR ++RA+YYT ++ D Q++S
Sbjct: 4 SSSNKIALFIDGANLYATAKTLGFDIDYKRLLLEFQSRGSLVRAFYYTAIIED--QEYSS 61
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
+ PL+DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FSGD
Sbjct: 62 IRPLIDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFSGD 121
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
G F +LV A+QR+ +VT+VST+ S P M +D+LRRQAD F DL L+++I RDP E
Sbjct: 122 GDFRSLVEAVQRRGVRVTVVSTIASQPPMIADELRRQADVFTDLVQLQSKIGRDPGE 178
>gi|300023756|ref|YP_003756367.1| hypothetical protein Hden_2248 [Hyphomicrobium denitrificans ATCC
51888]
gi|299525577|gb|ADJ24046.1| protein of unknown function DUF88 [Hyphomicrobium denitrificans
ATCC 51888]
Length = 213
Score = 246 bits (630), Expect = 7e-64, Method: Composition-based stats.
Identities = 99/186 (53%), Positives = 139/186 (74%), Gaps = 7/186 (3%)
Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
F P E+IALFIDGANLYA++K+LGFDIDY++LL FR + ++RA YYT + EQ++S
Sbjct: 3 FYPTERIALFIDGANLYATAKSLGFDIDYKRLLGLFRQKGQLVRALYYTALAE--EQEYS 60
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
+ PL+DWL YNGF +V K KEFT+ GR++VK +MD+EL VDA ++ L+H+VIFSG
Sbjct: 61 SIRPLIDWLDYNGFSMVTKPTKEFTDATGRRKVKGNMDIELTVDAMLLADSLDHIVIFSG 120
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD----- 176
DG F +LVAALQ+K K+V+++ST+ + P M +D+LRRQAD F+DLA L++++ R
Sbjct: 121 DGDFRSLVAALQQKGKRVSVISTLQTQPPMVADELRRQADQFIDLADLEDQVGRAQNGRG 180
Query: 177 PDEDKK 182
P E +
Sbjct: 181 PRESSR 186
>gi|316934150|ref|YP_004109132.1| hypothetical protein Rpdx1_2816 [Rhodopseudomonas palustris DX-1]
gi|315601864|gb|ADU44399.1| hypothetical protein Rpdx1_2816 [Rhodopseudomonas palustris DX-1]
Length = 213
Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats.
Identities = 96/173 (55%), Positives = 134/173 (77%), Gaps = 2/173 (1%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
KIALFIDGANLYA++K LGFDIDY++LLK F+ R ++RA+YYT ++ D Q++S + PL
Sbjct: 8 KIALFIDGANLYATAKTLGFDIDYKRLLKEFQGRGNLVRAFYYTAIIED--QEYSSIRPL 65
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126
+DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FSGDG F
Sbjct: 66 IDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFSGDGDFR 125
Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
+LV A+QR+ +VT++ST+ S P M +D+LRRQAD F DL L+++I RDP +
Sbjct: 126 SLVEAVQRRGVRVTVISTISSQPPMIADELRRQADIFTDLVELQSKIGRDPAD 178
>gi|217977184|ref|YP_002361331.1| protein of unknown function DUF88 [Methylocella silvestris BL2]
gi|217502560|gb|ACK49969.1| protein of unknown function DUF88 [Methylocella silvestris BL2]
Length = 205
Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats.
Identities = 99/179 (55%), Positives = 141/179 (78%), Gaps = 2/179 (1%)
Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+E+IALFIDGANLYA++K+LGFDIDY++LLK F+SR +IRA+YYT +V D Q++S +
Sbjct: 3 DQERIALFIDGANLYATAKSLGFDIDYKRLLKEFQSRGKLIRAFYYTALVED--QEYSSI 60
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
PL+DWL YNG+ VV K KEF ++ GR++VK +MD+ELAVDA E +E L+H+V+FSGDG
Sbjct: 61 RPLVDWLDYNGYSVVTKPTKEFVDSLGRRKVKGNMDIELAVDAMEMAEHLDHIVLFSGDG 120
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182
F +LV A+QRK +V++VST + P+M +D+LRRQAD F+D+ +L ++I RD + +
Sbjct: 121 DFRSLVEAIQRKGVRVSVVSTNATQPAMVADELRRQADEFIDIIHLASKIGRDAGDRPE 179
>gi|90420856|ref|ZP_01228761.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90334831|gb|EAS48603.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 201
Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats.
Identities = 110/177 (62%), Positives = 143/177 (80%), Gaps = 2/177 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFD REKIALFIDGANLYA+S+ LGFDIDY+K+L++F +R ++RAYYYT +V D E +
Sbjct: 1 MFDQREKIALFIDGANLYAASRGLGFDIDYKKMLRSFEARGYLLRAYYYTALVEDNE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++VV K A+EFT+ GR+R+K +MD+ELAVDA E + ++H V+FS
Sbjct: 59 SSIRPLIDWLDYNGYRVVTKPAREFTDASGRRRIKGNMDIELAVDAMELVDTVDHFVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
GDG F +LVAALQRK +KV++VST+ S P M SD LRRQAD+F++LA LK EI RDP
Sbjct: 119 GDGDFRSLVAALQRKGRKVSVVSTLTSSPPMISDDLRRQADHFIELANLKAEIGRDP 175
>gi|16125797|ref|NP_420361.1| hypothetical protein CC_1550 [Caulobacter crescentus CB15]
gi|221234556|ref|YP_002516992.1| cytosolic protein [Caulobacter crescentus NA1000]
gi|13422935|gb|AAK23529.1| conserved hypothetical protein [Caulobacter crescentus CB15]
gi|220963728|gb|ACL95084.1| hypothetical cytosolic protein [Caulobacter crescentus NA1000]
Length = 198
Score = 244 bits (624), Expect = 3e-63, Method: Composition-based stats.
Identities = 101/181 (55%), Positives = 134/181 (74%), Gaps = 2/181 (1%)
Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
F P +++ALFIDGANLY+++KALGFDIDYRKLL F+ R ++IRAYYYT + + + +S
Sbjct: 3 FYPTDRLALFIDGANLYSAAKALGFDIDYRKLLDEFKKRGVLIRAYYYTAIAENDD--YS 60
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
P+ PL+DWL YNGF +V K A+EFT++ GRKR + MD+E+AVD + +E +HLV+FSG
Sbjct: 61 PIRPLVDWLDYNGFTLVTKPAREFTDSQGRKRWRGDMDIEIAVDMLQIAETADHLVLFSG 120
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
DG F LV A+QRK ++VT+VST+ S P M SD LRRQAD F+DLA L N I R
Sbjct: 121 DGDFRALVEAVQRKGRRVTVVSTMKSQPPMTSDDLRRQADNFVDLADLGNIIGRPQRTPP 180
Query: 182 K 182
+
Sbjct: 181 R 181
>gi|118587968|ref|ZP_01545378.1| hypothetical protein SIAM614_10343 [Stappia aggregata IAM 12614]
gi|118439590|gb|EAV46221.1| hypothetical protein SIAM614_10343 [Stappia aggregata IAM 12614]
Length = 188
Score = 244 bits (624), Expect = 3e-63, Method: Composition-based stats.
Identities = 97/171 (56%), Positives = 136/171 (79%), Gaps = 2/171 (1%)
Query: 11 FIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWL 70
FIDGANLY+++KA+GFDIDY++LLK F+ +A ++RAYYYT ++ D Q++S + PL+DWL
Sbjct: 2 FIDGANLYSTAKAIGFDIDYKRLLKEFQGQAYLLRAYYYTALIED--QEYSSIRPLIDWL 59
Query: 71 HYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVA 130
YNG++V+ K KEF ++ GR++VK +MD+ELAVDA E E ++H+V+FSGDG F +LV
Sbjct: 60 DYNGYKVITKPVKEFVDSAGRRKVKGNMDIELAVDAMELVESVDHVVLFSGDGDFRSLVE 119
Query: 131 ALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
ALQRK +KV++VST+ + P M +D LRRQAD+F+DLA L N+I RDP E
Sbjct: 120 ALQRKGRKVSVVSTLKTQPPMIADDLRRQADHFIDLASLANKIGRDPSERP 170
>gi|167645687|ref|YP_001683350.1| hypothetical protein Caul_1723 [Caulobacter sp. K31]
gi|167348117|gb|ABZ70852.1| protein of unknown function DUF88 [Caulobacter sp. K31]
Length = 207
Score = 243 bits (621), Expect = 7e-63, Method: Composition-based stats.
Identities = 100/180 (55%), Positives = 135/180 (75%), Gaps = 3/180 (1%)
Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
F P E++ALFIDGAN ++++K+LGFDIDYRKLL FR R +++RAYYYT + + E +S
Sbjct: 3 FYPTERLALFIDGANFFSAAKSLGFDIDYRKLLDEFRKRGLLVRAYYYTAIAENEE--YS 60
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
P+ PL+DWL YNGF +V K A+EFT++ GRKR + MD+E+AVD E + ++HLV+FSG
Sbjct: 61 PIRPLVDWLDYNGFTLVTKPAREFTDSQGRKRWRGDMDIEIAVDMLEMAATVDHLVLFSG 120
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
DG F V A+QRK ++VT+VST+ S P MASD LRRQAD F+DLA L + I R P ++
Sbjct: 121 DGDFRAAVEAVQRKGRRVTVVSTMKSQPPMASDDLRRQADNFVDLADLGSIIGR-PQANR 179
>gi|209964804|ref|YP_002297719.1| hypothetical protein RC1_1502 [Rhodospirillum centenum SW]
gi|209958270|gb|ACI98906.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 233
Score = 243 bits (620), Expect = 9e-63, Method: Composition-based stats.
Identities = 90/178 (50%), Positives = 133/178 (74%), Gaps = 2/178 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+F E++A+FIDGANLYA++++LGFDIDY++LL+ F R ++RA+YYT +V D Q++
Sbjct: 5 IFYQEERLAMFIDGANLYAAARSLGFDIDYKRLLELFAGRGRLVRAFYYTALVED--QEY 62
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWL YNG+ +V K KE+T+ GR+++K +MD+ELA+D E +E ++H+++FS
Sbjct: 63 SPIRPLVDWLDYNGYTMVTKPTKEYTDASGRRKIKGNMDIELAIDVMEMAEHVDHILLFS 122
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
GDG F LV A+QRK +VT++STV S P M +D+LRRQAD F++L L I R
Sbjct: 123 GDGDFRRLVEAVQRKGVRVTVISTVRSTPPMVADELRRQADNFLELQDLSPNIMRTHS 180
>gi|295690031|ref|YP_003593724.1| hypothetical protein Cseg_2656 [Caulobacter segnis ATCC 21756]
gi|295431934|gb|ADG11106.1| protein of unknown function DUF88 [Caulobacter segnis ATCC 21756]
Length = 198
Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats.
Identities = 101/181 (55%), Positives = 133/181 (73%), Gaps = 2/181 (1%)
Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
F P ++IALFIDGANLY+++KALGFDIDYRKLL F+ R ++IRAYYYT + + + +S
Sbjct: 3 FYPTDRIALFIDGANLYSAAKALGFDIDYRKLLDEFKKRGVLIRAYYYTAIAENDD--YS 60
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
P+ PL+DWL YNGF +V K A+EFT++ GRKR + MD+E+AVD + +E +HLV+FSG
Sbjct: 61 PIRPLVDWLDYNGFTLVTKPAREFTDSQGRKRWRGDMDIEIAVDMLQMAETADHLVLFSG 120
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
DG F LV A+QRK ++VT+VST+ S P M SD LRRQAD F+DLA L I R
Sbjct: 121 DGDFRALVEAVQRKGRRVTVVSTMKSQPPMTSDDLRRQADNFVDLADLGGIIGRPQRVQS 180
Query: 182 K 182
+
Sbjct: 181 R 181
>gi|227820632|ref|YP_002824602.1| hypothetical protein NGR_c00450 [Sinorhizobium fredii NGR234]
gi|227339631|gb|ACP23849.1| conserved hypothetical protein [Sinorhizobium fredii NGR234]
Length = 191
Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats.
Identities = 115/182 (63%), Positives = 145/182 (79%), Gaps = 2/182 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFD REKIALFIDGANLYA+SK+LGFDIDYRKLL AF+ RA ++RAYYYT ++ D E F
Sbjct: 1 MFDSREKIALFIDGANLYATSKSLGFDIDYRKLLSAFQKRAYLVRAYYYTALIEDLE--F 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG+ VV K AKEFT+ GR+++K SMDVELA+DA EQ + ++H V+FS
Sbjct: 59 SSIRPLIDWLDYNGYTVVTKPAKEFTDALGRRKIKGSMDVELAIDALEQRQVVDHYVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG FTTLVAALQR +KVT+VST+ + P M +D+LRRQAD+F+DL L++EI R P
Sbjct: 119 GDGNFTTLVAALQRNGRKVTVVSTLSTQPPMIADELRRQADHFIDLIALRSEIDRHPQAA 178
Query: 181 KK 182
+
Sbjct: 179 PQ 180
>gi|298291613|ref|YP_003693552.1| hypothetical protein Snov_1628 [Starkeya novella DSM 506]
gi|296928124|gb|ADH88933.1| protein of unknown function DUF88 [Starkeya novella DSM 506]
Length = 203
Score = 242 bits (619), Expect = 1e-62, Method: Composition-based stats.
Identities = 99/175 (56%), Positives = 138/175 (78%), Gaps = 2/175 (1%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
EKIALFIDGANLY+++K+LGFDIDY++LLK F+ R V+RA+YYTT+V D E +S +
Sbjct: 1 MEKIALFIDGANLYSATKSLGFDIDYKRLLKEFQGRGYVLRAFYYTTLVEDSE--YSSIR 58
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
PLLDWL YNG+ VV K A+EFT++ GR+RV+ +MD+ELAV+A E + ++H+V+FSGDG
Sbjct: 59 PLLDWLDYNGYSVVTKPAREFTDSQGRRRVRGNMDIELAVNAMELAGHVDHIVLFSGDGD 118
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
F +LV A+QRK +VT+VS++ + P M +D+LRRQAD F+DL L+ + RDP +
Sbjct: 119 FRSLVEAIQRKGVRVTVVSSIHTQPPMIADELRRQADVFLDLVDLQGRVGRDPAD 173
>gi|83311350|ref|YP_421614.1| hypothetical protein amb2251 [Magnetospirillum magneticum AMB-1]
gi|82946191|dbj|BAE51055.1| Uncharacterized conserved protein [Magnetospirillum magneticum
AMB-1]
Length = 187
Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats.
Identities = 91/176 (51%), Positives = 133/176 (75%), Gaps = 2/176 (1%)
Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
F E++ LFIDG+NLY++++ALGFDIDY+KLL F + +IRA+YYT ++ D Q++S
Sbjct: 3 FYSAERLGLFIDGSNLYSAARALGFDIDYKKLLNLFAGKGRLIRAFYYTALMED--QEYS 60
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
P+ PL+DWL YNG+ +V K KEFT+ GR+++K +MD+ELA+D E + L+H+V+FSG
Sbjct: 61 PIRPLVDWLDYNGYTMVTKPTKEFTDAMGRRKIKGNMDIELAIDVMEMCQYLDHVVLFSG 120
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
DG F LV A+QRK +V++VST+ S P M +D+LRRQAD F++L L+++IAR
Sbjct: 121 DGDFRRLVEAVQRKGVRVSVVSTIRSQPPMVADELRRQADVFIELQDLESQIARAQ 176
>gi|46201864|ref|ZP_00208280.1| COG1432: Uncharacterized conserved protein [Magnetospirillum
magnetotacticum MS-1]
Length = 187
Score = 241 bits (617), Expect = 2e-62, Method: Composition-based stats.
Identities = 90/176 (51%), Positives = 133/176 (75%), Gaps = 2/176 (1%)
Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
F E++ LFIDG+NLY+++++LGFDIDY+KLL F + +IRA+YYT ++ D Q++S
Sbjct: 3 FYSAERLGLFIDGSNLYSAARSLGFDIDYKKLLNLFAGKGRLIRAFYYTALMED--QEYS 60
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
P+ PL+DWL YNG+ +V K KEFT+ GR+++K +MD+ELA+D E + L+H+V+FSG
Sbjct: 61 PIRPLVDWLDYNGYTMVTKPTKEFTDAMGRRKIKGNMDIELAIDVMEMCQYLDHVVLFSG 120
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
DG F LV A+QRK +V++VST+ S P M +D+LRRQAD F++L L+++IAR
Sbjct: 121 DGDFRRLVEAVQRKGVRVSVVSTIRSQPPMVADELRRQADVFIELQDLESQIARAQ 176
>gi|197105347|ref|YP_002130724.1| hypothetical protein PHZ_c1884 [Phenylobacterium zucineum HLK1]
gi|196478767|gb|ACG78295.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
Length = 195
Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats.
Identities = 100/180 (55%), Positives = 136/180 (75%), Gaps = 2/180 (1%)
Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
F P +++ALFIDGANLY+++K LGFDIDYRKLL+ FR R++++RAYYYT +V + E +S
Sbjct: 3 FYPTDRLALFIDGANLYSAAKNLGFDIDYRKLLEEFRKRSVLVRAYYYTALVENEE--YS 60
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
P+ PL+DWL YNG+++V K A+E+T++ GRKR + MDVE+AVD E + +HLV+FSG
Sbjct: 61 PIRPLVDWLDYNGYRLVTKSAREYTDSQGRKRWRGDMDVEIAVDMLEMAAHADHLVLFSG 120
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
DG F LV A+QRK +VT+VST+ S P M SD+LRRQAD F+DLA L + I R +
Sbjct: 121 DGDFRALVEAVQRKGSRVTVVSTLKSQPPMVSDELRRQADSFVDLADLADIIGRPSRLPR 180
>gi|304392073|ref|ZP_07374015.1| hypothetical protein R2A130_0742 [Ahrensia sp. R2A130]
gi|303296302|gb|EFL90660.1| hypothetical protein R2A130_0742 [Ahrensia sp. R2A130]
Length = 199
Score = 241 bits (615), Expect = 4e-62, Method: Composition-based stats.
Identities = 105/176 (59%), Positives = 139/176 (78%), Gaps = 2/176 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFD REKIAL IDGANLYA+S+ALGFDIDYR++L AF+ R V+RAYYYT +V D Q++
Sbjct: 1 MFDEREKIALMIDGANLYATSRALGFDIDYRQMLVAFQKRGYVLRAYYYTALVED--QEY 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG++V+ K AKEFT+ GR++VK +MD+ELAVDA + ++ ++H V+FS
Sbjct: 59 SAIRPLIDWLDYNGYRVITKPAKEFTDASGRRKVKGNMDIELAVDALDLADTVDHFVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
GDG F LV +LQRK ++VT+VST S P M +D+LRRQAD F+DL L++EI R
Sbjct: 119 GDGDFRALVESLQRKGRRVTVVSTTSSQPPMIADELRRQADVFIDLKSLQDEIGRS 174
>gi|315499955|ref|YP_004088758.1| hypothetical protein Astex_2970 [Asticcacaulis excentricus CB 48]
gi|315417967|gb|ADU14607.1| hypothetical protein Astex_2970 [Asticcacaulis excentricus CB 48]
Length = 189
Score = 241 bits (615), Expect = 4e-62, Method: Composition-based stats.
Identities = 102/180 (56%), Positives = 133/180 (73%), Gaps = 3/180 (1%)
Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
F P +KIALFIDGANLY+++KAL FDIDYRKLL FR R I++RAYYYT +V + +S
Sbjct: 3 FYPTDKIALFIDGANLYSAAKALNFDIDYRKLLDEFRKRGILLRAYYYTALVEGDD--YS 60
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
P+ PL+DWL YNGF ++ K AKE+T+ GRKR + MD+E+A D E +E +HLV+FSG
Sbjct: 61 PIRPLVDWLDYNGFALITKTAKEYTDAQGRKRWRGDMDIEIACDMMEIAEHADHLVLFSG 120
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
DG F L+ A+QRK +VT+VSTV S P M SD+LRRQAD F+DLA L + + R P + +
Sbjct: 121 DGDFRRLIEAVQRKGCRVTVVSTVKSQPPMTSDELRRQADTFVDLADLASVVGR-PRQQQ 179
>gi|239787551|emb|CAX84020.1| conserved uncharacterized protein [uncultured bacterium]
Length = 206
Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats.
Identities = 100/189 (52%), Positives = 140/189 (74%), Gaps = 10/189 (5%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+F P+E++ALFIDG+NLYA+++ALGFDIDY++LL+ F + +IRA+YYT +V D Q++
Sbjct: 2 VFYPQERVALFIDGSNLYAAARALGFDIDYKRLLQMFAGKGRLIRAFYYTALVED--QEY 59
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWL YNG+ +V K KEFT+ GR+++K +MD+ELA+D E SE L+H+V+FS
Sbjct: 60 SPIRPLVDWLDYNGYTMVTKPTKEFTDASGRRKIKGNMDIELAIDVMEMSEHLDHIVLFS 119
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD---- 176
GDG F LV A+QRK +VT+VSTV S P M +D+LRRQAD F++L L+ I R
Sbjct: 120 GDGDFRRLVDAVQRKGVRVTVVSTVRSQPPMVADELRRQADNFVELQDLQPSIERTIANR 179
Query: 177 ----PDEDK 181
P ED+
Sbjct: 180 EHGAPREDR 188
>gi|170738400|ref|YP_001767055.1| hypothetical protein M446_0033 [Methylobacterium sp. 4-46]
gi|168192674|gb|ACA14621.1| protein of unknown function DUF88 [Methylobacterium sp. 4-46]
Length = 216
Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats.
Identities = 98/176 (55%), Positives = 135/176 (76%), Gaps = 2/176 (1%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
++ ALFIDGAN+YA++KALGFDIDYRKLL FRSR +IRA+YYT ++ D Q++S + P
Sbjct: 4 QRSALFIDGANVYATTKALGFDIDYRKLLADFRSRENLIRAFYYTALIED--QEYSSIRP 61
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
L+DWL YNG++VV K AKEFT++ GR+++K +MD+EL +DA E S ++H+V+FSGDG F
Sbjct: 62 LIDWLDYNGYRVVTKPAKEFTDSTGRRKIKGNMDIELTIDALELSPYIDHMVLFSGDGDF 121
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
LVAA+QR+ +VT+VST+ + P M SD LRRQAD F+D+ +L I RD +
Sbjct: 122 KPLVAAMQRRGVRVTVVSTIQTQPPMVSDDLRRQADDFVDIVHLIPRIGRDQSDRP 177
>gi|310815107|ref|YP_003963071.1| hypothetical protein EIO_0609 [Ketogulonicigenium vulgare Y25]
gi|308753842|gb|ADO41771.1| conserved hypothetical protein [Ketogulonicigenium vulgare Y25]
Length = 196
Score = 238 bits (609), Expect = 2e-61, Method: Composition-based stats.
Identities = 96/182 (52%), Positives = 133/182 (73%), Gaps = 2/182 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E+IALFIDGANLYA+SK+LGFDIDY+ L F R +IRA+YYT ++ + E +
Sbjct: 1 MFYRDERIALFIDGANLYAASKSLGFDIDYKLLRSEFMRRGRLIRAFYYTALLENEE--Y 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWLHYNGF + K AKEF + GR+++K +MD+EL VDA E + ++H+V+FS
Sbjct: 59 SPIRPLVDWLHYNGFSMRTKPAKEFQDAQGRRKIKGNMDIELTVDAMELAPHVDHIVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG F L+ ALQR+ +V++VSTV S P M +D+LRRQAD F++L L++ + R P D
Sbjct: 119 GDGDFRPLIEALQRRGVRVSVVSTVRSQPPMIADELRRQADNFIELDELRDVLGRPPRPD 178
Query: 181 KK 182
+
Sbjct: 179 AR 180
>gi|220920088|ref|YP_002495389.1| hypothetical protein Mnod_0035 [Methylobacterium nodulans ORS 2060]
gi|219944694|gb|ACL55086.1| protein of unknown function DUF88 [Methylobacterium nodulans ORS
2060]
Length = 219
Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats.
Identities = 97/176 (55%), Positives = 135/176 (76%), Gaps = 2/176 (1%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
++ ALFIDGAN+YA++KALGFDIDYRKLL F++R +IRA+YYT +V D Q++S + P
Sbjct: 4 QRSALFIDGANVYATTKALGFDIDYRKLLADFKARENLIRAFYYTALVED--QEYSSIRP 61
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
L+DWL YNG++VV K AKEFT++ GR++VK +MD+EL +DA E S ++H+V+FSGDG F
Sbjct: 62 LIDWLDYNGYRVVTKPAKEFTDSSGRRKVKGNMDIELTIDALELSPYIDHMVLFSGDGDF 121
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
LVAA+QR+ +VT+VST+ + P M +D LRRQAD F+D+ +L I RD +
Sbjct: 122 KPLVAAMQRRGVRVTVVSTIQTQPPMVADDLRRQADDFVDIVHLIPRIGRDQSDRP 177
>gi|254418577|ref|ZP_05032301.1| conserved hypothetical protein [Brevundimonas sp. BAL3]
gi|196184754|gb|EDX79730.1| conserved hypothetical protein [Brevundimonas sp. BAL3]
Length = 180
Score = 238 bits (607), Expect = 3e-61, Method: Composition-based stats.
Identities = 86/176 (48%), Positives = 122/176 (69%), Gaps = 2/176 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF +++A+FIDG+NLY++++AL D+D++++L FR ++I+ RAYYYT VV ++F
Sbjct: 1 MFHSTDRLAIFIDGSNLYSAARALQHDMDFKRMLDWFREKSILTRAYYYTAVVE--GEEF 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SP+ PL+DWL YNGF VV K K FT+ G R+K +MD+E+AVD E + L+H V+FS
Sbjct: 59 SPVKPLVDWLDYNGFSVVTKPVKRFTDGQGHSRIKGNMDIEIAVDMLELAPRLDHAVLFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
GDG F LV A+Q +VT+VST + P +D+LRRQAD F+DL L E R
Sbjct: 119 GDGDFRRLVQAVQALGVRVTVVSTQKTQPPHIADELRRQADAFLDLNDLMAEFCRP 174
>gi|148259544|ref|YP_001233671.1| hypothetical protein Acry_0528 [Acidiphilium cryptum JF-5]
gi|326402750|ref|YP_004282831.1| hypothetical protein ACMV_06020 [Acidiphilium multivorum AIU301]
gi|146401225|gb|ABQ29752.1| protein of unknown function DUF88 [Acidiphilium cryptum JF-5]
gi|325049611|dbj|BAJ79949.1| hypothetical protein ACMV_06020 [Acidiphilium multivorum AIU301]
Length = 190
Score = 238 bits (607), Expect = 3e-61, Method: Composition-based stats.
Identities = 92/178 (51%), Positives = 131/178 (73%), Gaps = 3/178 (1%)
Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
P+EK ALFIDGANLYA+S+ALGFD+DYR+LL F R ++RAYYY+ ++ +++SPL
Sbjct: 5 PQEKTALFIDGANLYAASRALGFDVDYRRLLDFF-DRVNLVRAYYYSALL--DTEEYSPL 61
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
PL DWL YNG+ +V K AKEFT+ GR+RVK +MD+ELA+D E + ++H ++FSGD
Sbjct: 62 KPLTDWLAYNGYTLVTKPAKEFTDGAGRRRVKGNMDIELAIDMLEMAPHIDHAILFSGDS 121
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
F LV A+QR+ +V+++ST+ + P M +D+LRRQ+D F+DLA + NE R E +
Sbjct: 122 DFRRLVEAVQRRGVRVSVISTIKTSPPMIADELRRQSDQFVDLADIANEFTRRQTEPR 179
>gi|323139351|ref|ZP_08074403.1| protein of unknown function DUF88 [Methylocystis sp. ATCC 49242]
gi|322395417|gb|EFX97966.1| protein of unknown function DUF88 [Methylocystis sp. ATCC 49242]
Length = 215
Score = 237 bits (606), Expect = 5e-61, Method: Composition-based stats.
Identities = 96/175 (54%), Positives = 131/175 (74%), Gaps = 2/175 (1%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
+E+IALFIDGANLY ++K FDIDYR+LL F R +IRA+YYT V+ D E FS +
Sbjct: 4 QERIALFIDGANLYQAAKTQSFDIDYRRLLSEFEQRGRLIRAFYYTAVIEDEE--FSSIR 61
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
PL+DWL YNG+ VV K AK F + G +++K +MDVELAVDA ++ ++H+ +FSGDG
Sbjct: 62 PLIDWLDYNGYAVVTKPAKAFVDATGHRKIKGNMDVELAVDAMGMADHIDHMWLFSGDGD 121
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
F +LVAA+QRK +V++VST+ + PSM +D+LRRQAD +DLA L ++I RDP+E
Sbjct: 122 FCSLVAAVQRKGVRVSVVSTITTRPSMLADELRRQADEVIDLADLADKIGRDPNE 176
>gi|114327650|ref|YP_744807.1| putative cytoplasmic protein [Granulibacter bethesdensis CGDNIH1]
gi|114315824|gb|ABI61884.1| hypothetical cytosolic protein [Granulibacter bethesdensis CGDNIH1]
Length = 195
Score = 237 bits (605), Expect = 6e-61, Method: Composition-based stats.
Identities = 92/180 (51%), Positives = 131/180 (72%), Gaps = 2/180 (1%)
Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
F P E+IALFIDGANLY++S+ LGF++DYR LL FRSR+ ++RAYYY+ V+ E +S
Sbjct: 3 FLPTERIALFIDGANLYSASRNLGFEVDYRNLLSTFRSRSQLVRAYYYSAVLETEE--YS 60
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
PL PL DWL YNG+ +V K A+EFT++ GR+R+K +MD+ELAVD E ++ ++H V+FSG
Sbjct: 61 PLKPLTDWLAYNGYNLVTKPAREFTDSSGRRRIKGNMDIELAVDMMEIADRIDHAVLFSG 120
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
D F +V A+QRK +V++VS++ + P M +D LRRQAD F++LA + R E +
Sbjct: 121 DADFRRVVEAVQRKGVRVSVVSSIRTSPPMIADDLRRQADEFLELADIATFFTRRQMEPR 180
>gi|114770098|ref|ZP_01447636.1| hypothetical protein OM2255_10695 [alpha proteobacterium HTCC2255]
gi|114548935|gb|EAU51818.1| hypothetical protein OM2255_10695 [alpha proteobacterium HTCC2255]
Length = 174
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 91/176 (51%), Positives = 132/176 (75%), Gaps = 2/176 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
M E+ ALFIDG+NL+AS+KAL +IDY+KL F R ++RAYYYT ++ + E
Sbjct: 1 MNYSDERTALFIDGSNLHASAKALNLEIDYKKLKNEFIKRGKLLRAYYYTALIENEEN-- 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SPL PL+DWL YNG+ +V+K AKEFT++ G+KR+K +MD+ELA+DA E + +EH++IFS
Sbjct: 59 SPLRPLVDWLTYNGYTIVSKPAKEFTDSAGQKRIKGNMDIELAIDAMELAPNVEHIIIFS 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
GDG F +LV +LQR+ +V++VST S P M +D+LRRQAD ++DL L++ I+++
Sbjct: 119 GDGDFQSLVKSLQRQGVRVSVVSTTRSHPPMIADELRRQADNYIDLEELRDVISQN 174
>gi|117925174|ref|YP_865791.1| hypothetical protein Mmc1_1877 [Magnetococcus sp. MC-1]
gi|117608930|gb|ABK44385.1| protein of unknown function DUF88 [Magnetococcus sp. MC-1]
Length = 194
Score = 234 bits (597), Expect = 5e-60, Method: Composition-based stats.
Identities = 86/177 (48%), Positives = 128/177 (72%), Gaps = 3/177 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+F E++ +FIDG+NLYA+ ++LGFD DY+KLL+ FRS+A +IRAYY+T + D Q++
Sbjct: 10 IFRQDERVMVFIDGSNLYAAIRSLGFDFDYKKLLRYFRSQANLIRAYYFTALGDD--QEY 67
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119
SP+ PL+DWL YNG+ VV K KE+ + G KR K +MD+E+AVD + + +H V+F
Sbjct: 68 SPIRPLVDWLAYNGYAVVTKPIKEYVDPVTGHKRTKGNMDIEIAVDMMKLAPYYDHAVLF 127
Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
SGDG F ++V Q + K VT+VS++++ P M +D+LRRQADYF++L +K + RD
Sbjct: 128 SGDGDFRSVVEVAQGQGKVVTVVSSLMTQPPMIADELRRQADYFIELNRIKEHLQRD 184
>gi|27377446|ref|NP_768975.1| hypothetical protein bll2335 [Bradyrhizobium japonicum USDA 110]
gi|27350590|dbj|BAC47600.1| bll2335 [Bradyrhizobium japonicum USDA 110]
Length = 203
Score = 233 bits (595), Expect = 7e-60, Method: Composition-based stats.
Identities = 101/177 (57%), Positives = 137/177 (77%), Gaps = 3/177 (1%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
EKIALFIDG+NL+A+SKALGFDIDYR+LL F+SR ++RA+YYTT++ D Q++S + P
Sbjct: 5 EKIALFIDGSNLHATSKALGFDIDYRRLLGEFQSRGALLRAFYYTTLIED--QEYSSIRP 62
Query: 66 LLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
L+DWL YNG+ VV K KEF + GR++VK SMDV+LAV+A E +E ++ +V+FSGDG
Sbjct: 63 LIDWLDYNGYTVVTKFTKEFVDAITGRRKVKGSMDVDLAVNAMELAEHVDQIVLFSGDGN 122
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
F +LV ALQR+ +VT+VST+ + P+M +D LRRQAD F+DLA LK ++ RDP
Sbjct: 123 FRSLVEALQRRGVRVTVVSTLCTQPAMVADDLRRQADVFIDLAELKPKVGRDPANRP 179
>gi|83858189|ref|ZP_00951711.1| hypothetical protein OA2633_01781 [Oceanicaulis alexandrii
HTCC2633]
gi|83853012|gb|EAP90864.1| hypothetical protein OA2633_01781 [Oceanicaulis alexandrii
HTCC2633]
Length = 190
Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats.
Identities = 90/178 (50%), Positives = 133/178 (74%), Gaps = 2/178 (1%)
Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
F P EK+ LFIDGANLY++++ L FDIDY++LL+ FR R +IRA YYT ++ ++++
Sbjct: 3 FYPNEKLGLFIDGANLYSAARNLDFDIDYKRLLEEFRKRGRLIRANYYTALIE--SEEYT 60
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
P+ PL+DWL YNGF+V+ K AKE+T++ GR+R+K MDV+LA+D E ++ L+H+V+FSG
Sbjct: 61 PIRPLIDWLDYNGFKVITKAAKEYTDDSGRRRIKGDMDVDLAIDVMEAADYLDHIVLFSG 120
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
DG F +V A+QRK +V++VST+ S P MA+D LRRQAD F++L L + R+ +
Sbjct: 121 DGDFKKVVEAVQRKGVRVSVVSTLKSSPPMAADDLRRQADTFIELQDLGKLVGRERRQ 178
>gi|329890088|ref|ZP_08268431.1| hypothetical protein BDIM_17840 [Brevundimonas diminuta ATCC 11568]
gi|328845389|gb|EGF94953.1| hypothetical protein BDIM_17840 [Brevundimonas diminuta ATCC 11568]
Length = 193
Score = 232 bits (593), Expect = 1e-59, Method: Composition-based stats.
Identities = 88/174 (50%), Positives = 119/174 (68%), Gaps = 2/174 (1%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
P ++IALFIDGANLY++++AL D+D++KL F +IRAYYYT ++ ++FSP
Sbjct: 4 HPDDRIALFIDGANLYSAARALNCDLDFKKLSTWFVGEGRLIRAYYYTAIIE--GEEFSP 61
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
+ PL+DWL YNGF VV K K FT+ G R K +MD+E+AVD E + L+ V+FSGD
Sbjct: 62 VRPLVDWLDYNGFTVVTKPVKRFTDAQGHSRTKGNMDMEIAVDMLELAPRLDQAVLFSGD 121
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
G F +V ALQ K +VT+VSTV S P SD LRRQAD F+DLA + N++ +
Sbjct: 122 GDFRRVVQALQAKGVRVTVVSTVKSQPPQISDDLRRQADAFVDLADIMNQVGKP 175
>gi|258541738|ref|YP_003187171.1| hypothetical protein APA01_06420 [Acetobacter pasteurianus IFO
3283-01]
gi|256632816|dbj|BAH98791.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01]
gi|256635873|dbj|BAI01842.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03]
gi|256638928|dbj|BAI04890.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07]
gi|256641982|dbj|BAI07937.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22]
gi|256645037|dbj|BAI10985.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26]
gi|256648092|dbj|BAI14033.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32]
gi|256651145|dbj|BAI17079.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256654136|dbj|BAI20063.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12]
Length = 207
Score = 231 bits (591), Expect = 2e-59, Method: Composition-based stats.
Identities = 81/181 (44%), Positives = 125/181 (69%), Gaps = 2/181 (1%)
Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
EK LFIDG++LY++S++LGFD+DY+KLL F ++ +IRAYYY ++ + +S
Sbjct: 3 LQKTEKTCLFIDGSSLYSTSRSLGFDVDYKKLLDFFAAKTHIIRAYYYAAIL--DTEDYS 60
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
PL PL DWL YNG+ +V K A+EFT++ G++RVK +MD+E+AVD E + ++H ++FSG
Sbjct: 61 PLKPLTDWLSYNGYFLVTKPAREFTDSTGKRRVKGNMDIEIAVDMMEMAPHIDHAILFSG 120
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
D F +V A+QR+ +V++VS++ S P + D LRRQAD F++L+ L R E+
Sbjct: 121 DSDFRRVVEAVQRQGTRVSVVSSMRSTPPLIGDDLRRQADQFLELSALAGNFTRRQTENP 180
Query: 182 K 182
+
Sbjct: 181 R 181
>gi|254293927|ref|YP_003059950.1| hypothetical protein Hbal_1565 [Hirschia baltica ATCC 49814]
gi|254042458|gb|ACT59253.1| protein of unknown function DUF88 [Hirschia baltica ATCC 49814]
Length = 184
Score = 231 bits (590), Expect = 3e-59, Method: Composition-based stats.
Identities = 91/174 (52%), Positives = 124/174 (71%), Gaps = 2/174 (1%)
Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
F E+IALFIDGANLY+++K L ++DYR+LL FR + ++RAYYYT ++ + E +S
Sbjct: 3 FYKDERIALFIDGANLYSAAKTLNVELDYRRLLSEFRKKGRLLRAYYYTALIENEE--YS 60
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
P+ PL+DWL YNG+ VV K AKEFT+ GR+RVK MDVE+AVD ++ L+H ++FSG
Sbjct: 61 PIRPLVDWLQYNGYNVVTKPAKEFTDAAGRRRVKGDMDVEIAVDMLTLADKLDHAILFSG 120
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
DG T LV ALQ + +V++VS+V + P M SD LRR AD F+DL+ L I R
Sbjct: 121 DGDLTVLVKALQNRGLRVSVVSSVKTQPPMISDDLRRSADNFIDLSDLVKIIGR 174
>gi|329114476|ref|ZP_08243238.1| Hypothetical protein APO_1273 [Acetobacter pomorum DM001]
gi|326696552|gb|EGE48231.1| Hypothetical protein APO_1273 [Acetobacter pomorum DM001]
Length = 207
Score = 231 bits (589), Expect = 4e-59, Method: Composition-based stats.
Identities = 81/181 (44%), Positives = 125/181 (69%), Gaps = 2/181 (1%)
Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
EK LFIDG++LY++S++LGFD+DY+KLL F ++ +IRAYYY ++ + +S
Sbjct: 3 LQKTEKTCLFIDGSSLYSTSRSLGFDVDYKKLLDFFAAKTHIIRAYYYAAIL--DTEDYS 60
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
PL PL DWL YNG+ +V K A+EFT++ G++RVK +MD+E+AVD E + ++H ++FSG
Sbjct: 61 PLKPLTDWLSYNGYFLVTKPAREFTDSTGKRRVKGNMDIEIAVDMLEMAPHIDHAILFSG 120
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
D F +V A+QR+ +V++VS++ S P + D LRRQAD F++L+ L R E+
Sbjct: 121 DSDFRRVVEAVQRQGTRVSVVSSMRSTPPLIGDDLRRQADQFLELSALAGNFTRRQTENP 180
Query: 182 K 182
+
Sbjct: 181 R 181
>gi|162147943|ref|YP_001602404.1| hypothetical protein GDI_2159 [Gluconacetobacter diazotrophicus PAl
5]
gi|161786520|emb|CAP56102.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
PAl 5]
Length = 210
Score = 230 bits (587), Expect = 7e-59, Method: Composition-based stats.
Identities = 84/180 (46%), Positives = 127/180 (70%), Gaps = 2/180 (1%)
Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
F P E++ LFIDGA+LY++S+ LGFD+DYR LL FRS+ VIRAYYY+ ++ +++S
Sbjct: 10 FQPNERVCLFIDGASLYSASRHLGFDVDYRNLLTFFRSKCHVIRAYYYSAILE--SEEYS 67
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
PL PL DWL YNG+ +V K A+EF ++ GR+RVK +MD+ELAVD E + ++H V+FSG
Sbjct: 68 PLKPLTDWLVYNGYFLVTKTAREFVDHNGRRRVKGNMDIELAVDMMEMAPRIDHAVLFSG 127
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
D F L+ +QR+ + +++S++ + P + D+LRRQAD F++LA + + R E +
Sbjct: 128 DADFRRLLETVQRQGVRTSVISSIRTSPPLIGDELRRQADQFIELADIAPQFTRRQAEAR 187
>gi|144899867|emb|CAM76731.1| protein containing DUF88 [Magnetospirillum gryphiswaldense MSR-1]
Length = 193
Score = 229 bits (584), Expect = 1e-58, Method: Composition-based stats.
Identities = 94/174 (54%), Positives = 132/174 (75%), Gaps = 2/174 (1%)
Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
F E++ LFIDG+NLYA++KALGFDIDY++LL F ++ +IRA+YYT +V D Q++S
Sbjct: 8 FYDSERVGLFIDGSNLYAAAKALGFDIDYKRLLDHFATKGRLIRAFYYTALVED--QEYS 65
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
P+ PL+DWL YNG+ +V K KEFT+ GR+++K +MD+ELA+D E + L+H+V+FSG
Sbjct: 66 PIRPLVDWLDYNGYTMVTKPTKEFTDAAGRRKIKGNMDIELAIDVMEMAPHLDHVVLFSG 125
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
DG F LV A+QRK +VT+VSTV S P M +D+LRRQAD F++L L++ I R
Sbjct: 126 DGDFRRLVEAIQRKGVRVTVVSTVRSQPPMVADELRRQADSFLELLDLESIIGR 179
>gi|209542561|ref|YP_002274790.1| hypothetical protein Gdia_0379 [Gluconacetobacter diazotrophicus
PAl 5]
gi|209530238|gb|ACI50175.1| protein of unknown function DUF88 [Gluconacetobacter diazotrophicus
PAl 5]
Length = 203
Score = 228 bits (581), Expect = 3e-58, Method: Composition-based stats.
Identities = 84/180 (46%), Positives = 127/180 (70%), Gaps = 2/180 (1%)
Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
F P E++ LFIDGA+LY++S+ LGFD+DYR LL FRS+ VIRAYYY+ ++ +++S
Sbjct: 3 FQPNERVCLFIDGASLYSASRHLGFDVDYRNLLTFFRSKCHVIRAYYYSAILE--SEEYS 60
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
PL PL DWL YNG+ +V K A+EF ++ GR+RVK +MD+ELAVD E + ++H V+FSG
Sbjct: 61 PLKPLTDWLVYNGYFLVTKTAREFVDHNGRRRVKGNMDIELAVDMMEMAPRIDHAVLFSG 120
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
D F L+ +QR+ + +++S++ + P + D+LRRQAD F++LA + + R E +
Sbjct: 121 DADFRRLLETVQRQGVRTSVISSIRTSPPLIGDELRRQADQFIELADIAPQFTRRQAEAR 180
>gi|296115034|ref|ZP_06833676.1| hypothetical protein GXY_04609 [Gluconacetobacter hansenii ATCC
23769]
gi|295978371|gb|EFG85107.1| hypothetical protein GXY_04609 [Gluconacetobacter hansenii ATCC
23769]
Length = 204
Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats.
Identities = 84/180 (46%), Positives = 130/180 (72%), Gaps = 2/180 (1%)
Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
F P+E++ LFIDG +LY++S+ LGF++DYRKLL FRS++ V+RAYYY+ V+ E +S
Sbjct: 3 FQPQERLCLFIDGTSLYSASRNLGFEVDYRKLLSFFRSKSNVLRAYYYSAVLETEE--YS 60
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
PL PL DWL YNG+ +V K A+E+T++ GR+RVK +MD+ELAVD E + ++H V+FSG
Sbjct: 61 PLKPLTDWLVYNGYFLVTKTAREYTDHTGRRRVKGNMDIELAVDMLEMAPRIDHAVLFSG 120
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
D L+ A+QR+ + T+++++ + P + D+LRRQAD F++LA + + R E++
Sbjct: 121 DADSRRLLEAVQRQGVRTTVIASIKTSPPLIGDELRRQADQFIELADIASHFTRRQIENR 180
>gi|330993366|ref|ZP_08317301.1| hypothetical protein SXCC_03264 [Gluconacetobacter sp. SXCC-1]
gi|329759396|gb|EGG75905.1| hypothetical protein SXCC_03264 [Gluconacetobacter sp. SXCC-1]
Length = 202
Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats.
Identities = 82/180 (45%), Positives = 128/180 (71%), Gaps = 2/180 (1%)
Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
F P+E++ LFIDG +LY++S+ LGF++DYRKLL+ FR+++ V+RAYYY+ V+ +++S
Sbjct: 3 FQPQERLCLFIDGTSLYSASRNLGFEVDYRKLLQFFRAKSNVLRAYYYSAVL--DTEEYS 60
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
PL PL DWL YNG+ +V K A+EF ++ GR+RV+ +MDVEL VD E + ++H V+FSG
Sbjct: 61 PLKPLTDWLVYNGYTLVTKNAREFIDHNGRRRVRGNMDVELTVDMMEMAPHIDHAVLFSG 120
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
D F L+ ++QR+ + T+V ++ + P + D+LRRQAD F++LA + R E +
Sbjct: 121 DSDFRRLLESVQRQGVRTTVVGSIKTTPPLIGDELRRQADQFIELADISANFMRRHIESR 180
>gi|114800400|ref|YP_759598.1| hypothetical protein HNE_0871 [Hyphomonas neptunium ATCC 15444]
gi|114740574|gb|ABI78699.1| conserved hypothetical protein [Hyphomonas neptunium ATCC 15444]
Length = 189
Score = 224 bits (571), Expect = 5e-57, Method: Composition-based stats.
Identities = 90/178 (50%), Positives = 129/178 (72%), Gaps = 2/178 (1%)
Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
F E++ALFIDGANLY++++A+G +ID+RKLLK F+SR ++RA YYT +V E +S
Sbjct: 3 FYKDERLALFIDGANLYSAARAVGLEIDFRKLLKEFQSRGRLVRASYYTALVESDE--YS 60
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
P+ PL+DWL YNGF VV K A+EF + GRKRV+ +MDVELAVD E + +H+V+FSG
Sbjct: 61 PIRPLVDWLAYNGFNVVKKPAREFVDREGRKRVRGNMDVELAVDMLEAAAYCDHIVLFSG 120
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
+G F LV A++ + +V++VST+ + P M SD LRR+AD F++L L + +AR +
Sbjct: 121 NGDFRRLVEAVKARGVRVSVVSTMNATPPMISDDLRREADTFIELTDLGDLVARPRRD 178
>gi|304321225|ref|YP_003854868.1| hypothetical protein PB2503_08354 [Parvularcula bermudensis
HTCC2503]
gi|303300127|gb|ADM09726.1| hypothetical protein PB2503_08354 [Parvularcula bermudensis
HTCC2503]
Length = 206
Score = 221 bits (563), Expect = 4e-56, Method: Composition-based stats.
Identities = 84/181 (46%), Positives = 127/181 (70%)
Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
DP +K A+FIDGANLY +++ LGFDIDY++LL+ R+ ++RAYYYT + + EQ +S
Sbjct: 3 LDPDDKTAIFIDGANLYKTARNLGFDIDYKRLLQKTRAETRLVRAYYYTAMPEEREQDYS 62
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
PL PL+DWL YNG+ ++ K A+EFT++ GRKR + S+D++LA+D E ++ ++ LV+F+G
Sbjct: 63 PLRPLVDWLDYNGYTMMTKAAREFTDSQGRKRFRGSVDIDLALDFVEMADKVDCLVLFTG 122
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
+G F +A Q + +V VST + P MASD +RRQAD F+DL L++ I R +
Sbjct: 123 NGDFRPAIAKAQSRGCRVICVSTTATQPPMASDDIRRQADQFVDLTSLEDVIGRKSTSHR 182
Query: 182 K 182
+
Sbjct: 183 R 183
>gi|307322655|ref|ZP_07601988.1| protein of unknown function DUF88 [Sinorhizobium meliloti AK83]
gi|306891701|gb|EFN22554.1| protein of unknown function DUF88 [Sinorhizobium meliloti AK83]
Length = 200
Score = 221 bits (563), Expect = 4e-56, Method: Composition-based stats.
Identities = 97/181 (53%), Positives = 139/181 (76%), Gaps = 2/181 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFD REKIALFIDG +L+++S++LGF+IDYR++L+AFR R ++R Y YT V+ D +
Sbjct: 1 MFDSREKIALFIDGPSLFSASRSLGFEIDYRRVLEAFRRRGYLLRVYLYTAVIEDDAHK- 59
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
+ +DWL YNG+QVV KVA +FT+ G++++K +M +ELA+DA EQ+ ++HLVI +
Sbjct: 60 -SMRSWIDWLDYNGYQVVTKVAVKFTDFAGQQKIKGNMALELAIDAMEQASNVDHLVIVT 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GD F LV A+QRK +KV+IVST+LS P M +D LRRQAD+F+DLA L++EIAR+P +
Sbjct: 119 GDSVFLALVEAIQRKGRKVSIVSTMLSRPPMVADDLRRQADHFIDLATLQHEIAREPSKY 178
Query: 181 K 181
+
Sbjct: 179 R 179
>gi|22298293|ref|NP_681540.1| hypothetical protein tlr0751 [Thermosynechococcus elongatus BP-1]
gi|22294472|dbj|BAC08302.1| tlr0751 [Thermosynechococcus elongatus BP-1]
Length = 227
Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats.
Identities = 57/178 (32%), Positives = 94/178 (52%), Gaps = 12/178 (6%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ R ++A+FIDG+NL+ ++ LG +IDY KLL + + R+++YT V E+Q
Sbjct: 15 VLQNRGRVAIFIDGSNLFYAALQLGIEIDYSKLLCHLTQGSRLFRSFFYTGVDPTNEKQ- 73
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L W+ NG++VV+K + + K+++DVE+AVD + ++ S
Sbjct: 74 ---QGFLLWMRRNGYRVVSKELVQLPDGS----KKANLDVEIAVDMMALVGCYDTAILVS 126
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
GDG V A+ + +V +VS SM SD L AD ++DL ++ EI + P
Sbjct: 127 GDGDLAYAVDAVSYRGARVEVVSL----RSMTSDSLINVADRYIDLESIREEIQKAPR 180
>gi|114570128|ref|YP_756808.1| hypothetical protein Mmar10_1578 [Maricaulis maris MCS10]
gi|114340590|gb|ABI65870.1| protein of unknown function DUF88 [Maricaulis maris MCS10]
Length = 179
Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats.
Identities = 87/177 (49%), Positives = 130/177 (73%), Gaps = 2/177 (1%)
Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
F P E+I LFIDGANL++++KAL FDID+++LL+ FR R +IRA YYT ++ ++++
Sbjct: 3 FYPDERIGLFIDGANLFSTTKALDFDIDFKRLLEEFRKRGKLIRANYYTALLE--HEEYN 60
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
PL PL+DWL YNGF V+ K AKE+T++ GR+R+K MD+ELAVD E + L+H+++F+G
Sbjct: 61 PLRPLVDWLDYNGFSVITKPAKEYTDDHGRRRIKGDMDIELAVDMLEAATYLDHIILFTG 120
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
DG F +AA + K ++++VS++ + PSM SD LRR+AD F++L L+ I R P
Sbjct: 121 DGDFRYALAAARAKGARISVVSSLKTSPSMISDDLRREADAFIELDDLRAMIGRAPA 177
>gi|312114148|ref|YP_004011744.1| hypothetical protein Rvan_1386 [Rhodomicrobium vannielii ATCC
17100]
gi|311219277|gb|ADP70645.1| hypothetical protein Rvan_1386 [Rhodomicrobium vannielii ATCC
17100]
Length = 178
Score = 213 bits (544), Expect = 6e-54, Method: Composition-based stats.
Identities = 83/177 (46%), Positives = 118/177 (66%), Gaps = 2/177 (1%)
Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
F E++ LF+DG NL+A+++ LGF IDY LL+ FR+ +IR YY + D S
Sbjct: 3 FYQNERLGLFLDGPNLFAAARTLGFMIDYGSLLRLFRNSGQLIRVNYYLPIADDF--ATS 60
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
PL + DWL YNG+ V+ K AK++ + GR+++KS MD+ELAVDA + L+H+V+FSG
Sbjct: 61 PLRGVSDWLQYNGYTVITKPAKDYVDANGRRKIKSGMDIELAVDALSLANSLDHIVLFSG 120
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
G F LV+ALQR+ ++VT+VST+ + P + +D LRR AD F+DLA L I R P
Sbjct: 121 LGDFCGLVSALQRRGRRVTVVSTIRTQPPIVADDLRRMADQFIDLADLAPMIGRAPA 177
>gi|254461881|ref|ZP_05075297.1| hypothetical protein RB2083_2472 [Rhodobacterales bacterium
HTCC2083]
gi|206678470|gb|EDZ42957.1| hypothetical protein RB2083_2472 [Rhodobacteraceae bacterium
HTCC2083]
Length = 200
Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats.
Identities = 73/176 (41%), Positives = 115/176 (65%), Gaps = 2/176 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E+IA+FIDG +L+A SKALGFDID++ K F R + + Y+TT+V ++F
Sbjct: 1 MFYKDERIAVFIDGKSLFACSKALGFDIDFKLFRKEFSQRGKLNKLSYFTTLV--DSEEF 58
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
S + PL+DWL YNG+ V K KE+ + GR++VK ++ VE+ + + ++H++I +
Sbjct: 59 SSVKPLVDWLSYNGYNTVTKPVKEYVDTAGRRKVKGNISVEMTIAVLDMVPFVDHIIIVT 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
GD F LV A+Q++ +V++VS++ P M SD LRRQAD F++L L++ I +
Sbjct: 119 GDKDFKPLVEAVQQRGTRVSVVSSIRVQPPMLSDDLRRQADNFIELDELRSVIEKP 174
>gi|294084108|ref|YP_003550866.1| hypothetical protein SAR116_0539 [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292663681|gb|ADE38782.1| Protein of unknown function DUF88 [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 183
Score = 211 bits (539), Expect = 2e-53, Method: Composition-based stats.
Identities = 76/178 (42%), Positives = 118/178 (66%), Gaps = 3/178 (1%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
+K ALFIDG+N YA+++AL DID+ ++ F +IRAYYYT + D Q+FS L
Sbjct: 1 MDKTALFIDGSNFYAAARALNLDIDFARMRTHFAKDTNLIRAYYYTAIPED--QEFSSLR 58
Query: 65 PLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
PL+DWL YNG+ VV+K+ +EF + GR+R+K +MD+ELA+D + + ++H ++FSGDG
Sbjct: 59 PLVDWLDYNGYAVVSKLTREFIDEETGRRRLKGNMDMELALDMLKLAPHIDHAILFSGDG 118
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
F L+ +Q + T+VST + P M +DQLRR AD ++D+A + +I++ +
Sbjct: 119 DFCRLLEDVQALGVRTTVVSTNKTSPPMVADQLRRMADVYIDMADIAADISKSSSKAP 176
>gi|58040236|ref|YP_192200.1| hypothetical protein GOX1805 [Gluconobacter oxydans 621H]
gi|58002650|gb|AAW61544.1| Hypothetical protein GOX1805 [Gluconobacter oxydans 621H]
Length = 202
Score = 211 bits (537), Expect = 4e-53, Method: Composition-based stats.
Identities = 79/181 (43%), Positives = 116/181 (64%), Gaps = 2/181 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ E+ ALFIDGA+L+ +++ LGF++D+R L F S+ + RA+YY + + +
Sbjct: 2 LLRQNERTALFIDGASLHHAARNLGFEVDFRSLRNLFESQCLFQRAFYYAAMPETDD--Y 59
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
SPL PL DWL YNG+ +V K A+EFT++ GR+R+K +MDVEL VD EQ+ L+H VI S
Sbjct: 60 SPLRPLTDWLAYNGYHLVLKNAREFTDHSGRRRIKGNMDVELTVDLLEQASRLDHAVIVS 119
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GD V A+Q + +VT++S++ S P M D LRRQAD F++LA + R E
Sbjct: 120 GDSDLRRAVEAVQARGVRVTVISSMRSTPLMIGDDLRRQADLFVELADIAPSFTRRQAEP 179
Query: 181 K 181
+
Sbjct: 180 R 180
>gi|282900793|ref|ZP_06308733.1| protein of unknown function DUF88 [Cylindrospermopsis raciborskii
CS-505]
gi|281194323|gb|EFA69280.1| protein of unknown function DUF88 [Cylindrospermopsis raciborskii
CS-505]
Length = 251
Score = 211 bits (537), Expect = 5e-53, Method: Composition-based stats.
Identities = 56/179 (31%), Positives = 98/179 (54%), Gaps = 12/179 (6%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++RA++YT V E+Q
Sbjct: 58 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRAFFYTGVDRTNEKQ- 116
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L W+ NG++V+AK + + K+++DVE+AVD + + V+ S
Sbjct: 117 ---QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDMMALVDSYDTAVLVS 169
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG V ++ + +V +VS SM SD L +D ++DL ++ +I + P +
Sbjct: 170 GDGDLAYAVNSVSYRGVRVEVVSL----RSMTSDSLINVSDRYIDLEAIREDIQKTPRQ 224
>gi|282896531|ref|ZP_06304551.1| Protein of unknown function DUF88 [Raphidiopsis brookii D9]
gi|281198637|gb|EFA73518.1| Protein of unknown function DUF88 [Raphidiopsis brookii D9]
Length = 248
Score = 209 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 56/179 (31%), Positives = 98/179 (54%), Gaps = 12/179 (6%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++RA++YT V E+Q
Sbjct: 55 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRAFFYTGVDRTNEKQ- 113
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L W+ NG++V+AK + + K+++DVE+AVD + + V+ S
Sbjct: 114 ---QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDMMALVDSYDTAVLVS 166
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG V ++ + +V +VS SM SD L +D ++DL ++ +I + P +
Sbjct: 167 GDGDLAYAVNSVSYRGVRVEVVSL----RSMTSDSLINVSDRYIDLEAIREDIQKTPRQ 221
>gi|220908708|ref|YP_002484019.1| hypothetical protein Cyan7425_3333 [Cyanothece sp. PCC 7425]
gi|219865319|gb|ACL45658.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7425]
Length = 207
Score = 209 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 59/178 (33%), Positives = 97/178 (54%), Gaps = 12/178 (6%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ + R ++A+FIDG+NL+ ++ LG +IDY KLL S + ++R+++YT V E+Q
Sbjct: 15 VLENRGRVAIFIDGSNLFYAALQLGIEIDYSKLLCRLTSGSRLLRSFFYTGVDPTNEKQ- 73
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L W+ NG++V+AK + + K+++DVE+AVD + V+ S
Sbjct: 74 ---QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDMMSLVGSYDTGVLVS 126
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
GDG V A+ + +V +VS SM SD L AD ++DL +K +I + P
Sbjct: 127 GDGDLAYAVDAVSYRGVRVEVVSL----RSMTSDSLINVADRYIDLDSIKEDIQKAPR 180
>gi|56750416|ref|YP_171117.1| hypothetical protein syc0407_c [Synechococcus elongatus PCC 6301]
gi|81299952|ref|YP_400160.1| hypothetical protein Synpcc7942_1143 [Synechococcus elongatus PCC
7942]
gi|56685375|dbj|BAD78597.1| hypothetical protein [Synechococcus elongatus PCC 6301]
gi|81168833|gb|ABB57173.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942]
Length = 198
Score = 209 bits (533), Expect = 1e-52, Method: Composition-based stats.
Identities = 60/180 (33%), Positives = 97/180 (53%), Gaps = 12/180 (6%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ + R +IA+FIDG+NL+ ++ LG +IDY KLL + + ++R+++YT V E+Q
Sbjct: 16 ILENRGRIAIFIDGSNLFYAALQLGIEIDYTKLLACLTNGSRLLRSFFYTGVDRSNEKQ- 74
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L W+ NG++VVAK + + K+++DVE+AVD + + V+ S
Sbjct: 75 ---QGFLLWMRRNGYRVVAKDLIQLPDGT----KKANLDVEIAVDMLALAGTYDTAVLVS 127
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG V + + +V +VS SM SD L AD ++DL LK I + P +
Sbjct: 128 GDGDLAYAVEVVGYRGVRVEVVSL----RSMTSDNLINVADRYIDLESLKASIQKLPRQP 183
>gi|6459785|gb|AAF11547.1|AE002037_8 conserved hypothetical protein [Deinococcus radiodurans R1]
Length = 263
Score = 208 bits (531), Expect = 2e-52, Method: Composition-based stats.
Identities = 62/172 (36%), Positives = 94/172 (54%), Gaps = 7/172 (4%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
E+IALFIDGAN+YA++K LG++ D+RK+L+ F + A+YYT V P
Sbjct: 64 MERIALFIDGANVYAAAKRLGWNFDHRKILEHFAGLGALYNAFYYTAV---PWPVDDKQK 120
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
+D L Y G+ V + +E T+ G ++S+D+EL D + V+ SGDG
Sbjct: 121 RFVDALTYMGYTVRTRPLRENTDENGDTSRRASLDIELVTDLLTTESRYDVAVLLSGDGD 180
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
F V L+ + KKV + S P M S +LR AD ++DLA ++ ++ R
Sbjct: 181 FERPVEVLRARGKKVIVASI----PEMTSAELRNAADEYVDLASIREQVERP 228
>gi|119487031|ref|ZP_01620903.1| hypothetical protein L8106_18981 [Lyngbya sp. PCC 8106]
gi|119455960|gb|EAW37094.1| hypothetical protein L8106_18981 [Lyngbya sp. PCC 8106]
Length = 205
Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats.
Identities = 58/180 (32%), Positives = 96/180 (53%), Gaps = 12/180 (6%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++R+++YT V E+Q
Sbjct: 16 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRSFFYTGVDRTNEKQ- 74
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L W+ NG++V+AK + + K+++DVE+AVD + V+ S
Sbjct: 75 ---QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDMLALVGSYDTAVLVS 127
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG V + + +V +VS SM SD L AD ++DL +K EI ++P
Sbjct: 128 GDGDLAYAVDCVSYRGVRVEVVSL----RSMTSDSLINVADRYIDLENVKEEIQKNPRSP 183
>gi|298492951|ref|YP_003723128.1| hypothetical protein Aazo_4859 ['Nostoc azollae' 0708]
gi|298234869|gb|ADI66005.1| protein of unknown function DUF88 ['Nostoc azollae' 0708]
Length = 210
Score = 207 bits (527), Expect = 6e-52, Method: Composition-based stats.
Identities = 57/179 (31%), Positives = 98/179 (54%), Gaps = 12/179 (6%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++RA++YT V E+Q
Sbjct: 17 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRAFFYTGVDRTNEKQ- 75
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L W+ NG++V+AK + + K+++DVE+AVD + + V+ S
Sbjct: 76 ---QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDMMALVDSYDTAVLVS 128
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG V ++ + +V +VS SM SD L +D ++DL +K +I + P +
Sbjct: 129 GDGDLAYAVNSVSYRGVRVEVVSL----RSMTSDSLINVSDRYIDLEAIKEDIQKTPRQ 183
>gi|284052456|ref|ZP_06382666.1| hypothetical protein AplaP_13393 [Arthrospira platensis str.
Paraca]
gi|291571487|dbj|BAI93759.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 205
Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats.
Identities = 59/180 (32%), Positives = 97/180 (53%), Gaps = 12/180 (6%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ + R ++A+FIDG+NL+ ++ LG +IDY KLL S + ++R+++YT V E+Q
Sbjct: 18 ILENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTSGSRLLRSFFYTGVDRTNEKQ- 76
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L W+ NG++VVAK + + K+++DVE+AVD + V+ S
Sbjct: 77 ---QGFLLWMRRNGYRVVAKDLVQLPDGS----KKANLDVEIAVDMIALVGAYDTAVLVS 129
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG V + + +V ++S SM SD L AD ++DL +K+EI + P
Sbjct: 130 GDGDLAYAVDCVSYRGVRVEVISL----RSMTSDSLINVADRYIDLEAIKDEIQKTPRSP 185
>gi|37522591|ref|NP_925968.1| hypothetical protein gll3022 [Gloeobacter violaceus PCC 7421]
gi|35213592|dbj|BAC90963.1| gll3022 [Gloeobacter violaceus PCC 7421]
Length = 216
Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats.
Identities = 57/176 (32%), Positives = 96/176 (54%), Gaps = 12/176 (6%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
R ++A+FIDG+NL+ ++ LG +IDY KLL + + ++R+++YT V E+Q
Sbjct: 19 RGRVAIFIDGSNLFYAALQLGIEIDYTKLLNRLTNGSRLLRSFFYTGVDRANEKQ----Q 74
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
L W+ NG++V+ K + + K+++DVE+AVD + + ++ SGDG
Sbjct: 75 GFLLWMRRNGYRVITKDLVQLPDGS----KKANLDVEIAVDMLSLAGSYDTAILVSGDGD 130
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
V A K +V +VS SM SD L AD ++DL +K +I + P ++
Sbjct: 131 LAYAVNAASYKGVRVEVVSL----RSMTSDYLINVADRYIDLEQIKEDIQKAPRQN 182
>gi|240141795|ref|YP_002966303.1| hypothetical protein MexAM1_META2p0024 [Methylobacterium extorquens
AM1]
gi|240011737|gb|ACS42962.1| hypothetical protein DUF88 [Methylobacterium extorquens AM1]
Length = 185
Score = 206 bits (524), Expect = 1e-51, Method: Composition-based stats.
Identities = 84/176 (47%), Positives = 128/176 (72%), Gaps = 3/176 (1%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
+ A+FIDGANLY+++KA+GFDIDY+KLL ++ ++R YYT + D E +S L PL
Sbjct: 5 RTAVFIDGANLYSTTKAIGFDIDYKKLLAHYKRDG-LLRINYYTALYDDGE--YSSLRPL 61
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126
LDWL YNG++V++K AKE+T++ GR++ K ++D+E+AVDA E + ++ +V+FSGDG F
Sbjct: 62 LDWLDYNGYRVISKPAKEWTDSAGRRKTKGNLDIEIAVDALELAPHIDRMVLFSGDGDFR 121
Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182
LV A+QR+ +V +VST+ + P+M SD+LRRQAD F+DLA + I + + +
Sbjct: 122 YLVEAMQRRGVRVVVVSTIQTQPAMVSDELRRQADEFVDLAKMMETIGQTDTDRPQ 177
>gi|332707287|ref|ZP_08427340.1| hypothetical protein LYNGBM3L_34690 [Lyngbya majuscula 3L]
gi|332354021|gb|EGJ33508.1| hypothetical protein LYNGBM3L_34690 [Lyngbya majuscula 3L]
Length = 200
Score = 206 bits (524), Expect = 1e-51, Method: Composition-based stats.
Identities = 56/180 (31%), Positives = 98/180 (54%), Gaps = 12/180 (6%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ + R ++A+FIDG+NL+ ++ LG +IDY KLL + + ++R+++YT V E+Q
Sbjct: 16 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTAGSRLLRSFFYTGVDRTNEKQ- 74
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L W+ NG++V+AK + + K+++DVE+AVD + V+ S
Sbjct: 75 ---QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDMMALVGSYDTAVLVS 127
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG V ++ + +V +VS SM SD L AD ++DL ++ I + P ++
Sbjct: 128 GDGDLAYAVDSVSYRGVRVEVVSL----RSMTSDSLINVADRYIDLDTIQESIQKTPKQN 183
>gi|186680639|ref|YP_001863835.1| hypothetical protein Npun_R0091 [Nostoc punctiforme PCC 73102]
gi|186463091|gb|ACC78892.1| protein of unknown function DUF88 [Nostoc punctiforme PCC 73102]
Length = 210
Score = 206 bits (524), Expect = 1e-51, Method: Composition-based stats.
Identities = 56/179 (31%), Positives = 98/179 (54%), Gaps = 12/179 (6%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++R+++YT V E+Q
Sbjct: 17 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRSFFYTGVDRTNEKQ- 75
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L W+ NG++V+AK + + K+++DVE+AVD + + V+ S
Sbjct: 76 ---QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDMMALVDSYDTAVLVS 128
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG V ++ + +V +VS SM SD L +D ++DL +K +I + P +
Sbjct: 129 GDGDLAYAVNSVSYRGVRVEVVSL----RSMTSDSLINVSDRYIDLEAIKEDIQKTPRQ 183
>gi|186686260|ref|YP_001869456.1| hypothetical protein Npun_R6229 [Nostoc punctiforme PCC 73102]
gi|186468712|gb|ACC84513.1| protein of unknown function DUF88 [Nostoc punctiforme PCC 73102]
Length = 231
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 61/175 (34%), Positives = 95/175 (54%), Gaps = 12/175 (6%)
Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
R ++A+FIDG NL+ ++ LG +IDY KLL + + ++RA++YT V E+Q
Sbjct: 56 NRGRVAIFIDGLNLFHTALQLGIEIDYVKLLCHLTNGSRLLRAFFYTGVDNSNEKQ---- 111
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L W+ NG++VVAK + EN KS+++VE+AVD + + V+ SGDG
Sbjct: 112 QGFLLWMRRNGYRVVAKDIMQPAEN----FKKSNLNVEIAVDMITLAPYYDTAVLVSGDG 167
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
V A+ R +V +VS + S+ L AD F+DL +K I +D +
Sbjct: 168 DLAYAVNAVSRMGVRVEVVSL----QTTTSESLIDVADCFIDLDSIKAHIQKDSN 218
>gi|94985935|ref|YP_605299.1| hypothetical protein Dgeo_1835 [Deinococcus geothermalis DSM 11300]
gi|94556216|gb|ABF46130.1| protein of unknown function DUF88 [Deinococcus geothermalis DSM
11300]
Length = 194
Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats.
Identities = 63/181 (34%), Positives = 100/181 (55%), Gaps = 11/181 (6%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
E+IALFIDGAN+YA++K LG++ D+RK+L+ FRS + A+YYT V P
Sbjct: 2 TERIALFIDGANVYAAAKRLGWNFDHRKMLEFFRSYGSLHNAFYYTAV---PLPMDDKQK 58
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
+D L Y G+ V + +E T+ G ++S+D+E+ D S+ + V+ +GDG
Sbjct: 59 RFIDALTYMGYTVRTRPLRESTDEHGDTHRRASLDIEIVTDLLTTSDRFDTAVLLTGDGD 118
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA----RDPDED 180
F V L+ + K+V + S P M S +LR AD ++DL ++ ++ R P E
Sbjct: 119 FERPVEVLRARGKRVVVASI----PEMTSYELRNAADEYVDLGAIREQVERLGYRLPSEQ 174
Query: 181 K 181
+
Sbjct: 175 R 175
>gi|17227728|ref|NP_484276.1| hypothetical protein all0232 [Nostoc sp. PCC 7120]
gi|75908934|ref|YP_323230.1| hypothetical protein Ava_2722 [Anabaena variabilis ATCC 29413]
gi|17135210|dbj|BAB77756.1| all0232 [Nostoc sp. PCC 7120]
gi|75702659|gb|ABA22335.1| Protein of unknown function DUF88 [Anabaena variabilis ATCC 29413]
Length = 209
Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats.
Identities = 57/179 (31%), Positives = 98/179 (54%), Gaps = 12/179 (6%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++RA++YT V E+Q
Sbjct: 16 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRAFFYTGVDRTNEKQ- 74
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L W+ NG++V+AK + + K+++DVE+AVD + + V+ S
Sbjct: 75 ---QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDMMALVDSYDTAVLVS 127
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG V ++ + +V +VS SM SD L +D ++DL +K +I + P +
Sbjct: 128 GDGDLAYAVNSVSYRGVRVEVVSL----RSMTSDSLINVSDRYIDLEAIKEDIQKTPRQ 182
>gi|218248715|ref|YP_002374086.1| hypothetical protein PCC8801_3991 [Cyanothece sp. PCC 8801]
gi|257061778|ref|YP_003139666.1| hypothetical protein Cyan8802_4033 [Cyanothece sp. PCC 8802]
gi|218169193|gb|ACK67930.1| protein of unknown function DUF88 [Cyanothece sp. PCC 8801]
gi|256591944|gb|ACV02831.1| protein of unknown function DUF88 [Cyanothece sp. PCC 8802]
Length = 226
Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats.
Identities = 58/180 (32%), Positives = 96/180 (53%), Gaps = 12/180 (6%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++RA++YT V E+Q
Sbjct: 41 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRAFFYTGVDRTNEKQ- 99
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L W+ NG++V+AK + + K+++DVE+AVD + VI S
Sbjct: 100 ---QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDLMALVGSYDTAVIVS 152
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG A+ + ++ +VS SM SD L AD ++DL +K +I + P +
Sbjct: 153 GDGDLAYAADAVSYRGSRIEVVSL----RSMTSDSLINVADRYIDLDQIKEDIQKSPKPN 208
>gi|226356860|ref|YP_002786600.1| hypothetical protein Deide_18580 [Deinococcus deserti VCD115]
gi|226318850|gb|ACO46846.1| Conserved hypothetical protein [Deinococcus deserti VCD115]
Length = 197
Score = 204 bits (519), Expect = 6e-51, Method: Composition-based stats.
Identities = 58/181 (32%), Positives = 96/181 (53%), Gaps = 11/181 (6%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
E+IALFIDGAN+YA++K LG++ D+RK+L+ F ++ + A+YYT V P
Sbjct: 1 MERIALFIDGANVYAAAKRLGWNFDHRKILEHFAAQGRLYNAFYYTAV---PMPIDDKQK 57
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
D L Y G+ V + +E T+ G ++++DVE+ D ++ + V+ +GDG
Sbjct: 58 RFTDALTYMGYTVRTRPLRESTDEHGDTSRRANLDVEIVTDLLTTADRYDTAVLLTGDGD 117
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD----PDED 180
F V L+ + K+V + S M S +LR AD ++D ++ + R P E
Sbjct: 118 FERPVEVLRARGKRVVVASIA----EMTSYELRNAADEYVDFKDIRVHVERPGYRLPSEQ 173
Query: 181 K 181
+
Sbjct: 174 R 174
>gi|119512208|ref|ZP_01631298.1| hypothetical protein N9414_13695 [Nodularia spumigena CCY9414]
gi|119463174|gb|EAW44121.1| hypothetical protein N9414_13695 [Nodularia spumigena CCY9414]
Length = 209
Score = 203 bits (518), Expect = 8e-51, Method: Composition-based stats.
Identities = 56/179 (31%), Positives = 99/179 (55%), Gaps = 12/179 (6%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++R+++YT V E+Q
Sbjct: 16 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRSFFYTGVDRTNEKQ- 74
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L W+ NG++V+AK + + K+++DVE+AVD + + V+ S
Sbjct: 75 ---QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDMMALVDSYDTAVLVS 127
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
GDG V ++ + +V +VS SM SD L +D ++DL +K +I ++P +
Sbjct: 128 GDGDLAYAVNSVSYRGVRVEVVSL----RSMTSDSLINVSDRYIDLEAIKEDIQKNPRQ 182
>gi|113475474|ref|YP_721535.1| hypothetical protein Tery_1805 [Trichodesmium erythraeum IMS101]
gi|110166522|gb|ABG51062.1| protein of unknown function DUF88 [Trichodesmium erythraeum IMS101]
Length = 204
Score = 203 bits (517), Expect = 8e-51, Method: Composition-based stats.
Identities = 53/180 (29%), Positives = 95/180 (52%), Gaps = 12/180 (6%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++R+++YT V E+Q
Sbjct: 20 ILENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRSFFYTGVDRTNEKQ- 78
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L W+ NG++V++K + + K+++DVE+AVD + ++ S
Sbjct: 79 ---QGFLLWMRRNGYRVISKDLVQLPDGS----KKANLDVEIAVDMMALVGSYDTAILVS 131
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG V A+ + +V +VS +M SD L +D ++DL +K +I +
Sbjct: 132 GDGDLAYAVDAVSYRGVRVEVVSL----RAMTSDSLINVSDRYIDLEQIKEDIQKTSKSP 187
>gi|15807658|ref|NP_295720.1| hypothetical protein DR_1997m [Deinococcus radiodurans R1]
gi|970086|dbj|BAA09936.1| ORF1 [Deinococcus radiodurans]
Length = 200
Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats.
Identities = 62/172 (36%), Positives = 94/172 (54%), Gaps = 7/172 (4%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
E+IALFIDGAN+YA++K LG++ D+RK+L+ F + A+YYT V P
Sbjct: 1 MERIALFIDGANVYAAAKRLGWNFDHRKILEHFAGLGALYNAFYYTAV---PWPVDDKQK 57
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
+D L Y G+ V + +E T+ G ++S+D+EL D + V+ SGDG
Sbjct: 58 RFVDALTYMGYTVRTRPLRENTDENGDTSRRASLDIELVTDLLTTESRYDVAVLLSGDGD 117
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
F V L+ + KKV + S P M S +LR AD ++DLA ++ ++ R
Sbjct: 118 FERPVEVLRARGKKVIVASI----PEMTSAELRNAADEYVDLASIREQVERP 165
>gi|157273336|gb|ABV27235.1| RtsE [Candidatus Chloracidobacterium thermophilum]
Length = 332
Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats.
Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 12/177 (6%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
R ++A+FIDG NL+ ++++ G +IDY KLL R ++RA++YT V +QQ
Sbjct: 20 SNRGRVAIFIDGNNLFHAARSAGVEIDYAKLLAYLRGDDPLLRAFFYTGV----DQQAER 75
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
L W+ NG++VV K K F + K+++DVE+AVD ++ + ++ SGD
Sbjct: 76 QQGFLLWMRRNGYRVVQKELKTFPDG----TKKANLDVEIAVDMLSLADKYDTAILVSGD 131
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
FT + + K +V + + S +L AD F +L + EI++ P +
Sbjct: 132 EDFTYALNVIAYKGVRVEVAGF----RANTSPRLIDVADRFHELDSVLAEISKSPSK 184
>gi|6136304|gb|AAF04325.1| unknown [Bradyrhizobium japonicum]
Length = 149
Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats.
Identities = 78/139 (56%), Positives = 108/139 (77%), Gaps = 2/139 (1%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
P KIALFIDGANLYA++K LGFDIDY++LLK F+SR ++RA+YYT ++ D Q++S
Sbjct: 4 SPTNKIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLLRAFYYTAIIED--QEYSS 61
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
+ PL+DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FSGD
Sbjct: 62 IRPLIDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFSGD 121
Query: 123 GCFTTLVAALQRKVKKVTI 141
G F +LV A+QR+ +VT+
Sbjct: 122 GDFRSLVEAVQRRGVRVTV 140
>gi|158335465|ref|YP_001516637.1| hypothetical protein AM1_2313 [Acaryochloris marina MBIC11017]
gi|158305706|gb|ABW27323.1| conserved hypothetical protein [Acaryochloris marina MBIC11017]
Length = 210
Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats.
Identities = 56/178 (31%), Positives = 94/178 (52%), Gaps = 12/178 (6%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ + R +IA+FIDG+NL+ ++ LG +IDY KLL + ++R+++YT V E+Q
Sbjct: 18 VLENRGRIAIFIDGSNLFYAALQLGIEIDYTKLLCRLTCGSRLLRSFFYTGVDPTNEKQ- 76
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L W+ NG++V+ K + + K+++DVE+AVD + ++ S
Sbjct: 77 ---QGFLLWMRRNGYRVITKELVQLPDGS----KKANLDVEIAVDMMSLVGCYDTAILVS 129
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
GDG V A+ + +V +VS SM SD L AD ++DL +K +I +
Sbjct: 130 GDGDLAYAVDAVSYRGIRVEVVSL----RSMTSDSLINVADRYIDLEGIKGDIQKASR 183
>gi|300867847|ref|ZP_07112489.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
gi|300334178|emb|CBN57665.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
Length = 201
Score = 201 bits (511), Expect = 5e-50, Method: Composition-based stats.
Identities = 56/180 (31%), Positives = 97/180 (53%), Gaps = 12/180 (6%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ + R ++A+FIDG+NL+ ++ LG +IDY KLL + + ++R+++YT V E+Q
Sbjct: 16 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTAGSRLLRSFFYTGVDRTNEKQ- 74
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L W+ NG++V++K + + K+++DVE+AVD + V+ S
Sbjct: 75 ---QGFLLWMRRNGYRVISKDLVQLPDGS----KKANLDVEIAVDMMALVGSYDTAVLVS 127
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG V A+ + +V +VS SM SD L AD ++DL +K +I + +
Sbjct: 128 GDGDLAYAVDAVSYRGVRVEVVSL----RSMTSDSLINVADRYIDLESIKEDIQKTNRPN 183
>gi|254424426|ref|ZP_05038144.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
gi|196191915|gb|EDX86879.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
Length = 211
Score = 200 bits (509), Expect = 9e-50, Method: Composition-based stats.
Identities = 57/180 (31%), Positives = 95/180 (52%), Gaps = 12/180 (6%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ + R ++A+FIDG+NL+ ++ LG +IDY KLL S + + R+++YT V E+Q
Sbjct: 19 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLSRLTSGSRLFRSFFYTGVDRSNEKQ- 77
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L W+ NG++V+AK + + K+++DVE+AVD + V+ S
Sbjct: 78 ---QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDMMALVGCYDTAVLVS 130
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG V A K +V +VS +M SD L +D ++DL +K +I + +
Sbjct: 131 GDGDLAYAVDAASYKGVRVEVVSL----RAMTSDSLINVSDRYIDLDSIKEDICKTSRAN 186
>gi|16331574|ref|NP_442302.1| hypothetical protein slr0650 [Synechocystis sp. PCC 6803]
gi|1001641|dbj|BAA10372.1| slr0650 [Synechocystis sp. PCC 6803]
Length = 201
Score = 199 bits (508), Expect = 1e-49, Method: Composition-based stats.
Identities = 57/180 (31%), Positives = 96/180 (53%), Gaps = 12/180 (6%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++RA++YT V E+Q
Sbjct: 16 LLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLHCLTGGSRLLRAFFYTGVDRSNEKQ- 74
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L W+ NG++V+AK + + K+++DVE+AVD + V+ S
Sbjct: 75 ---QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDLMSLVGSYDTAVVVS 127
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG A+ + ++ +VS SM SD L +D ++DL +K EI + P +
Sbjct: 128 GDGDLAYAADAVSYRGARIEVVSL----RSMTSDSLINVSDRYVDLDSIKEEIQKQPRPN 183
>gi|320335491|ref|YP_004172202.1| hypothetical protein Deima_2908 [Deinococcus maricopensis DSM
21211]
gi|319756780|gb|ADV68537.1| Domain of unknown function DUF88 [Deinococcus maricopensis DSM
21211]
Length = 192
Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats.
Identities = 58/181 (32%), Positives = 96/181 (53%), Gaps = 11/181 (6%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
E+I LFIDGAN+YA++K LG++ D+RK+L+ F + A+YYT V P
Sbjct: 1 MERIGLFIDGANVYAAAKRLGWNFDHRKILEHFAGYGRLYNAFYYTAV---PTPVDDKQK 57
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
+D L Y G+ V K+ +E T+ G ++++D+ L D ++ + ++ +GDG
Sbjct: 58 RFIDALTYMGYTVRTKMLRENTDEHGDTHRRANLDILLVTDLLATADLYDTAILLTGDGD 117
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD----PDED 180
F V L+ K K+V + S P M S +LR AD ++D ++ ++ R P E
Sbjct: 118 FERPVEVLRAKGKRVIVASI----PEMTSYELRNAADAYVDFKDIRGDVERPGYRLPSEG 173
Query: 181 K 181
+
Sbjct: 174 R 174
>gi|284929296|ref|YP_003421818.1| hypothetical protein UCYN_07430 [cyanobacterium UCYN-A]
gi|284809740|gb|ADB95437.1| uncharacterized conserved protein [cyanobacterium UCYN-A]
Length = 227
Score = 198 bits (503), Expect = 3e-49, Method: Composition-based stats.
Identities = 56/180 (31%), Positives = 96/180 (53%), Gaps = 12/180 (6%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
M + R ++A+FIDG+NL+ ++ LG +IDY +LL + ++RA++YT V E+Q
Sbjct: 42 MLENRGRVAIFIDGSNLFYAALQLGIEIDYTRLLYRLTEGSRLLRAFFYTGVDRTNEKQ- 100
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L W+ NG++V+AK + + K+++DVE+AVD + +I S
Sbjct: 101 ---QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDLMALVGSYDTAIIVS 153
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG ++ + +V +VS SM SD L AD+++DL +K +I + +
Sbjct: 154 GDGDLAYAANSVSYRGARVEVVSL----RSMTSDSLINVADHYIDLDQIKEDIQKTSRTN 209
>gi|170079300|ref|YP_001735938.1| hypothetical protein SYNPCC7002_A2707 [Synechococcus sp. PCC 7002]
gi|169886969|gb|ACB00683.1| conserved hypothetical protein [Synechococcus sp. PCC 7002]
Length = 204
Score = 197 bits (501), Expect = 6e-49, Method: Composition-based stats.
Identities = 56/175 (32%), Positives = 95/175 (54%), Gaps = 12/175 (6%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++R+++YT V E+Q
Sbjct: 16 VLENRGRVAIFIDGSNLFYAALQLGIEIDYSKLLYRLTGGSRLLRSFFYTGVDRANEKQ- 74
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L W+ NG++V+AK + + K+++DVE+AVD + V+ S
Sbjct: 75 ---QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDMMALVGSYDTAVLVS 127
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
GDG V A+ + +V +VS SM SD L AD ++DL ++ +I +
Sbjct: 128 GDGDLAYAVDAVSYRGARVEVVSL----RSMTSDSLINVADRYIDLEQIQTDIQK 178
>gi|307151237|ref|YP_003886621.1| hypothetical protein Cyan7822_1345 [Cyanothece sp. PCC 7822]
gi|306981465|gb|ADN13346.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7822]
Length = 222
Score = 196 bits (500), Expect = 8e-49, Method: Composition-based stats.
Identities = 58/176 (32%), Positives = 95/176 (53%), Gaps = 12/176 (6%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ + R ++A+FIDG+NL+ ++ LG +IDY KLL + + ++RA++YT V E+Q
Sbjct: 37 ILENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLFRLTNGSKLLRAFFYTGVDRSNEKQ- 95
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L W+ NG++V+AK + + K+++DVE+AVD + VI S
Sbjct: 96 ---QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDLMSLVGSYDTAVIVS 148
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
GDG A+ + +V +VS SM SD L AD ++DL +K +I +
Sbjct: 149 GDGDLAYAANAVSYRGARVEVVSL----RSMTSDSLINVADRYVDLDQIKEDIQKH 200
>gi|218437105|ref|YP_002375434.1| hypothetical protein PCC7424_0096 [Cyanothece sp. PCC 7424]
gi|218169833|gb|ACK68566.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7424]
Length = 201
Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats.
Identities = 58/178 (32%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ + R ++A+FIDG+NL+ ++ LG +IDY KLL + + ++RA++YT V E+Q
Sbjct: 16 ILENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLYRLTNGSKLLRAFFYTGVDRSNEKQ- 74
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L W+ NG++V+AK + + K+++DVE+AVD + VI S
Sbjct: 75 ---QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDLMSLVGSYDTAVIVS 127
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
GDG A+ + +V +VS SM SD L AD ++DL +K +I +
Sbjct: 128 GDGDLAYAANAVSYQGARVEVVSL----RSMTSDSLINVADRYVDLDQIKEDIQKHQK 181
>gi|17232221|ref|NP_488769.1| hypothetical protein all4729 [Nostoc sp. PCC 7120]
gi|75908164|ref|YP_322460.1| hypothetical protein Ava_1943 [Anabaena variabilis ATCC 29413]
gi|17133866|dbj|BAB76428.1| all4729 [Nostoc sp. PCC 7120]
gi|75701889|gb|ABA21565.1| Protein of unknown function DUF88 [Anabaena variabilis ATCC 29413]
Length = 236
Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats.
Identities = 59/178 (33%), Positives = 94/178 (52%), Gaps = 14/178 (7%)
Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVV-----GDPEQ 58
R ++A+FIDGANL+ ++ LG +IDY KLL + + ++RA++YT V ++
Sbjct: 53 NRGRVAIFIDGANLFQAALQLGIEIDYLKLLCRLTAGSRLLRAFFYTGVDMSRPTPTRQR 112
Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVI 118
L W+ NG++VV K + T+N K +++VE+AVD + + V+
Sbjct: 113 TNDKQQGFLFWMRRNGYRVVTKEL-QVTDNN----KKPNLNVEIAVDMITLAPHYDTAVL 167
Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
SGDG V A+ +V +VS +M +D L ADYF+DL +K I +D
Sbjct: 168 VSGDGDLAYAVNAVSSTGVRVEVVSL----RTMTNDCLIDVADYFIDLDSIKQYIQKD 221
>gi|172036862|ref|YP_001803363.1| hypothetical protein cce_1947 [Cyanothece sp. ATCC 51142]
gi|171698316|gb|ACB51297.1| unknown [Cyanothece sp. ATCC 51142]
Length = 225
Score = 194 bits (494), Expect = 5e-48, Method: Composition-based stats.
Identities = 55/180 (30%), Positives = 95/180 (52%), Gaps = 12/180 (6%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++RA++YT V E+Q
Sbjct: 41 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLYRLTEGSRLLRAFFYTGVDRTNEKQ- 99
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L W+ NG++V+AK + + K+++DVE+AVD + +I S
Sbjct: 100 ---QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDLMALVGSYDTAIIVS 152
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG ++ + ++ +VS SM SD L AD ++DL +K +I + +
Sbjct: 153 GDGDLAYAADSVSYRGARIEVVSL----RSMTSDSLINVADRYIDLDQIKEDIQKTRKPN 208
>gi|126656216|ref|ZP_01727600.1| hypothetical protein CY0110_03999 [Cyanothece sp. CCY0110]
gi|126622496|gb|EAZ93202.1| hypothetical protein CY0110_03999 [Cyanothece sp. CCY0110]
Length = 225
Score = 194 bits (494), Expect = 5e-48, Method: Composition-based stats.
Identities = 55/180 (30%), Positives = 95/180 (52%), Gaps = 12/180 (6%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++RA++YT V E+Q
Sbjct: 41 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLYRLTEGSRLLRAFFYTGVDRTNEKQ- 99
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L W+ NG++V+AK + + K+++DVE+AVD + +I S
Sbjct: 100 ---QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDLMALVGSYDTAIIVS 152
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG ++ + ++ +VS SM SD L AD ++DL +K +I + +
Sbjct: 153 GDGDLAYAADSVSYRGARIEVVSL----RSMTSDSLINVADRYIDLDQIKEDIQKTRKPN 208
>gi|166367025|ref|YP_001659298.1| hypothetical protein MAE_42840 [Microcystis aeruginosa NIES-843]
gi|166089398|dbj|BAG04106.1| hypothetical protein MAE_42840 [Microcystis aeruginosa NIES-843]
Length = 201
Score = 193 bits (492), Expect = 6e-48, Method: Composition-based stats.
Identities = 58/178 (32%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ + R ++A+FIDG+NL+ ++ LG +IDY KLL + + ++RA++YT V E+Q
Sbjct: 16 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTAGSRLLRAFFYTGVDRTNEKQ- 74
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L W+ NG++V+AK + + K+++DVE+AVD + VI S
Sbjct: 75 ---QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDLMALVGSYDTAVIVS 127
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
GDG ++ + +V +VS SM SD L AD ++DL +K EI +
Sbjct: 128 GDGDLAYAADSVSYRGARVEVVSL----RSMTSDSLINVADRYVDLDQIKEEIQKTSK 181
>gi|159029235|emb|CAO87595.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 201
Score = 193 bits (492), Expect = 6e-48, Method: Composition-based stats.
Identities = 58/178 (32%), Positives = 95/178 (53%), Gaps = 12/178 (6%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ + R ++A+FIDG+NL+ ++ LG +IDY KLL + + ++RA++YT V E+Q
Sbjct: 16 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTAGSRLLRAFFYTGVDRTNEKQ- 74
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L W+ NG++V+AK + + K+++DVE+AVD + VI S
Sbjct: 75 ---QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDLMALVGSYDTAVIVS 127
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
GDG ++ + +V +VS SM SD L AD ++DL +K EI +
Sbjct: 128 GDGDLAYAADSVSYRGARVEVVSL----RSMTSDSLINVADRYVDLDQIKEEIQKTSK 181
>gi|218440568|ref|YP_002378897.1| hypothetical protein PCC7424_3645 [Cyanothece sp. PCC 7424]
gi|218173296|gb|ACK72029.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7424]
Length = 180
Score = 193 bits (492), Expect = 8e-48, Method: Composition-based stats.
Identities = 50/178 (28%), Positives = 97/178 (54%), Gaps = 12/178 (6%)
Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA--IVIRAYYYTTVVGDPEQQ 59
P++++++F+DG N++ + + G+ D R++L+ F + +I A++YT + +Q
Sbjct: 10 LYPKDRLSIFVDGNNMFYAQQKNGWFFDPRRVLEYFTNDPTVNLINAFWYTGLKDSQDQ- 68
Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHLVI 118
D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +++
Sbjct: 69 ----RGFRDALISLGYTVRTKILKEYYDDSSGRYSQKANLDIEIVVDMFNTVDQYDRVIL 124
Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
FSGDG F + L+ K +T+VST M + +LR D ++DL ++N I +
Sbjct: 125 FSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRNFIEKT 178
>gi|37521016|ref|NP_924393.1| hypothetical protein glr1447 [Gloeobacter violaceus PCC 7421]
gi|35212012|dbj|BAC89388.1| glr1447 [Gloeobacter violaceus PCC 7421]
Length = 190
Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats.
Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 10/175 (5%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
++++++FIDG N++ + ++ G+ D RK+L+ F ++ A++YT + +Q
Sbjct: 5 YRQDRVSIFIDGNNMFYAQRSNGWFFDPRKVLEYFNRHEALVNAFWYTGIRDPQDQ---- 60
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
D L GF V K KE+ + G K+++D+E+ VD F H V+FSG
Sbjct: 61 -RGFRDALIAMGFTVREKFLKEYYDRLSGEMTQKANLDIEIVVDMFNTVAQYNHAVLFSG 119
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
DG F V L+ K ++T+VST M + +LR AD ++DL L+ I +
Sbjct: 120 DGDFERAVELLRSKDTRITVVST----EGMIARELRNAADRYIDLNDLRPFIEKT 170
>gi|86605182|ref|YP_473945.1| hypothetical protein CYA_0464 [Synechococcus sp. JA-3-3Ab]
gi|86553724|gb|ABC98682.1| conserved hypothetical protein [Synechococcus sp. JA-3-3Ab]
Length = 198
Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats.
Identities = 59/176 (33%), Positives = 98/176 (55%), Gaps = 12/176 (6%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
D R ++A+FIDG+NL+ ++ +G +IDY +LLK R+ ++R+++YT V + E+Q
Sbjct: 18 DDRGRVAIFIDGSNLFYAALQMGIEIDYTRLLKTLTGRSPLLRSFFYTGVDRNNEKQ--- 74
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
L W+ NG++VV K + + ++++DVE+AVD E V+ SGD
Sbjct: 75 -QGFLLWMRRNGYRVVTKELTQLPDGS----KRANLDVEIAVDMLSLVRWYETAVLVSGD 129
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
G V A+ + +V +VS SM SDQL AD ++DL +K++I +
Sbjct: 130 GDLAYAVNAVSYQGARVEVVSL----RSMTSDQLINLADRYIDLESIKDQIKKTNR 181
>gi|75908331|ref|YP_322627.1| hypothetical protein Ava_2110 [Anabaena variabilis ATCC 29413]
gi|75702056|gb|ABA21732.1| Protein of unknown function DUF88 [Anabaena variabilis ATCC 29413]
Length = 173
Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats.
Identities = 52/179 (29%), Positives = 97/179 (54%), Gaps = 13/179 (7%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAF---RSRAIVIRAYYYTTVVGDPE 57
M P ++++F+DG N++ + + G+ D R++L+ F +S +I A++YT + +
Sbjct: 1 MGSPMNRLSIFVDGNNMFYAQQKNGWFFDPRRVLEYFKNEQSETTLINAFWYTGLKDPQD 60
Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHL 116
Q D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +
Sbjct: 61 Q-----RGFRDALISLGYTVRTKILKEYYDDSSGRYSQKANLDIEIVVDMFNTVDQYDRV 115
Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
V+FSGDG F + L+ K +T+VST M + +LR D ++DL +++ I +
Sbjct: 116 VLFSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDRIEK 170
>gi|218246675|ref|YP_002372046.1| hypothetical protein PCC8801_1847 [Cyanothece sp. PCC 8801]
gi|257059717|ref|YP_003137605.1| hypothetical protein Cyan8802_1873 [Cyanothece sp. PCC 8802]
gi|218167153|gb|ACK65890.1| protein of unknown function DUF88 [Cyanothece sp. PCC 8801]
gi|256589883|gb|ACV00770.1| protein of unknown function DUF88 [Cyanothece sp. PCC 8802]
Length = 178
Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats.
Identities = 48/175 (27%), Positives = 95/175 (54%), Gaps = 12/175 (6%)
Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAI--VIRAYYYTTVVGDPEQQFS 61
P+E++++F+DG N++ + + + D R++L+ F + ++ A++YT + +Q
Sbjct: 10 PKERLSIFVDGNNMFYAQQKNSWFFDPRRVLEYFTNDPTITLVNAFWYTGLKDSQDQ--- 66
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +++FS
Sbjct: 67 --RGFRDALISLGYTVRTKILKEYYDDTSGRYSQKANLDIEIVVDMFNTVDQYDRVILFS 124
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
GDG F + L+ K +T+VST M + +LR D ++DL ++ I +
Sbjct: 125 GDGDFERAIELLRSKSTHITVVST----EGMIARELRNATDRYIDLNDIRPHIEK 175
>gi|307153372|ref|YP_003888756.1| hypothetical protein Cyan7822_3539 [Cyanothece sp. PCC 7822]
gi|306983600|gb|ADN15481.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7822]
Length = 180
Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats.
Identities = 49/177 (27%), Positives = 95/177 (53%), Gaps = 12/177 (6%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAI--VIRAYYYTTVVGDPEQQF 60
P++++++F+DG N++ + + G+ D R++L F + +I A++YT + +Q
Sbjct: 11 YPKDRLSIFVDGNNMFYAQQKNGWFFDPRRVLDHFTNDPTVTLINAFWYTGLKDSQDQ-- 68
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119
D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +++F
Sbjct: 69 ---RGFRDALISLGYTVRTKILKEYYDDSSGRYSQKANLDIEIVVDMFNTVDQYDRVILF 125
Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
SGDG F + L+ K +T+VST M + +LR D ++DL ++ I +
Sbjct: 126 SGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRTFIEKT 178
>gi|218514126|ref|ZP_03510966.1| hypothetical protein Retl8_10672 [Rhizobium etli 8C-3]
Length = 149
Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 80/135 (59%), Positives = 108/135 (80%), Gaps = 2/135 (1%)
Query: 45 RAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAV 104
RAYYYT ++ D Q++S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+
Sbjct: 1 RAYYYTALIED--QEYSSIRPLIDWLDYNGYKVVTKPAKEFTDSMGRRKIKGNMDIELAI 58
Query: 105 DAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
DA EQSE ++HLVIFSGDG FT LV ALQR+ +KV+++ST+ + P M +D LRRQAD+F+
Sbjct: 59 DAMEQSETVDHLVIFSGDGDFTNLVEALQRRGRKVSVISTMATQPPMIADDLRRQADHFI 118
Query: 165 DLAYLKNEIARDPDE 179
DL LK EI RDP E
Sbjct: 119 DLLSLKAEIGRDPSE 133
>gi|86607727|ref|YP_476489.1| hypothetical protein CYB_0228 [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86556269|gb|ABD01226.1| conserved hypothetical protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 200
Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats.
Identities = 60/176 (34%), Positives = 98/176 (55%), Gaps = 12/176 (6%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
D R ++A+FIDG+NL+ ++ LG +IDY +LLK R+ ++R+++YT V + E+Q
Sbjct: 18 DNRGRVAIFIDGSNLFYAALQLGIEIDYTRLLKTLSGRSPLLRSFFYTGVDRNNEKQ--- 74
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
L W+ NG++VV K + + ++++DVE+AVD E V+ SGD
Sbjct: 75 -QGFLLWMRRNGYRVVTKELTQLPDGS----KRANLDVEIAVDMLSLVRWYETAVLVSGD 129
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
G V A+ + +V +VS SM SDQL AD ++DL +K++I +
Sbjct: 130 GDLAYAVNAVSYQGARVEVVSL----RSMTSDQLINLADRYIDLESIKDQIKKTNR 181
>gi|119509873|ref|ZP_01629016.1| hypothetical protein N9414_11729 [Nodularia spumigena CCY9414]
gi|119465482|gb|EAW46376.1| hypothetical protein N9414_11729 [Nodularia spumigena CCY9414]
Length = 236
Score = 191 bits (487), Expect = 3e-47, Method: Composition-based stats.
Identities = 52/180 (28%), Positives = 87/180 (48%), Gaps = 14/180 (7%)
Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
+ R ++A+FIDG +L+ ++ LG +IDY KLL + ++RA++YT +
Sbjct: 51 LENRGRVAIFIDGVSLFHTALQLGIEIDYLKLLCHLTGGSRLLRAFFYTAIDTSRPNAAR 110
Query: 62 P-----LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHL 116
P L W+ NG++VV K + K +++VE+AVD + +
Sbjct: 111 PRPNEKQQGFLFWMRRNGYRVVTKEVQ-----LADHTKKHNLNVEIAVDMITLAPYYDTA 165
Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
++ SGD V A+ +V +VS ++ SD L AD F+DL +K I +D
Sbjct: 166 ILVSGDRDLAYAVNAVSATGSRVEVVSL----RALTSDSLIDVADEFIDLDRIKQYIQKD 221
>gi|254510985|ref|ZP_05123052.1| hypothetical protein RKLH11_1520 [Rhodobacteraceae bacterium KLH11]
gi|221534696|gb|EEE37684.1| hypothetical protein RKLH11_1520 [Rhodobacteraceae bacterium KLH11]
Length = 183
Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats.
Identities = 74/178 (41%), Positives = 113/178 (63%), Gaps = 2/178 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MF E A+F+DG NL+ S+KALGFD+DY +L + ++RA Y+T ++ E +
Sbjct: 3 MFHQNETTAIFVDGYNLHHSAKALGFDVDYERLKSMVEKQCHLLRATYFTMLIERDE--Y 60
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
PL+D+L YNG+ V AK A+EF GR R K ++V+LA+ A + + H V+F+
Sbjct: 61 IATRPLVDFLQYNGWTVTAKDAREFVHGDGRSRFKGRIEVDLALAAARITPHINHAVLFT 120
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
G F LV LQ + +V++VST+ ++P +ASDQLRR+AD F++LA +++ IAR
Sbjct: 121 GSQDFCPLVEYLQDQGVRVSVVSTIKTEPILASDQLRRKADKFIELADIRDVIARPDR 178
>gi|298491324|ref|YP_003721501.1| hypothetical protein Aazo_2466 ['Nostoc azollae' 0708]
gi|298233242|gb|ADI64378.1| protein of unknown function DUF88 ['Nostoc azollae' 0708]
Length = 228
Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats.
Identities = 56/173 (32%), Positives = 88/173 (50%), Gaps = 12/173 (6%)
Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
R ++A+FIDG NL+ ++ LG +IDY KLL + ++RA++YT V E+Q
Sbjct: 53 NRGRVAIFIDGLNLFHAALQLGIEIDYVKLLCRLTQSSRLLRAFFYTGVDASKEKQ---- 108
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L W+ NG++VV K EN K +++VE+A+D + + V+ SGDG
Sbjct: 109 QGFLLWMRRNGYRVVTKDILAVAENG----KKPNLNVEIAIDMITLAPYYDTAVLVSGDG 164
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
V A+ +V ++ + SD L ADYF+D +K I +D
Sbjct: 165 DLAYAVNAVSSLGSRVEVI----GLQTTTSDTLINVADYFIDFDSVKQHIQKD 213
>gi|166368642|ref|YP_001660915.1| hypothetical protein MAE_59010 [Microcystis aeruginosa NIES-843]
gi|159030407|emb|CAO91305.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|166091015|dbj|BAG05723.1| hypothetical protein MAE_59010 [Microcystis aeruginosa NIES-843]
Length = 183
Score = 191 bits (486), Expect = 4e-47, Method: Composition-based stats.
Identities = 50/176 (28%), Positives = 96/176 (54%), Gaps = 12/176 (6%)
Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAI--VIRAYYYTTVVGDPEQQFS 61
P++++++F+DG N++ + + G+ D RK+L F + +I A++YT + +Q
Sbjct: 15 PKDRLSIFVDGNNMFYAQQKNGWFFDPRKVLNYFTNDPNIMLINAFWYTGLKDSQDQ--- 71
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +++FS
Sbjct: 72 --RGFRDALISLGYTVRTKILKEYYDDSSGRFSQKANLDIEIVVDMFNTVDQYDRVILFS 129
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
GDG F + L+ K +T+VST M + +LR D ++DL ++ +I +
Sbjct: 130 GDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRKDIEKS 181
>gi|282896757|ref|ZP_06304763.1| Protein of unknown function DUF88 [Raphidiopsis brookii D9]
gi|281198166|gb|EFA73056.1| Protein of unknown function DUF88 [Raphidiopsis brookii D9]
Length = 173
Score = 191 bits (485), Expect = 5e-47, Method: Composition-based stats.
Identities = 52/180 (28%), Positives = 98/180 (54%), Gaps = 13/180 (7%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA---IVIRAYYYTTVVGDPE 57
M P ++++F+DG N++ + + G+ D R++L+ F++ +I A++YT + +
Sbjct: 1 MVLPMSRLSIFVDGNNMFYAQQKNGWFFDPRRVLEYFKNEQPETTLINAFWYTGLKDPQD 60
Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHL 116
Q D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +
Sbjct: 61 Q-----RGFRDALISLGYTVRTKILKEYYDDVSGRYSQKANLDIEIVVDMFNTVDQYDRV 115
Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
V+FSGDG F + L+ K +T+VST M + +LR D ++DL +K++I +
Sbjct: 116 VLFSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIKDQIEKT 171
>gi|282901769|ref|ZP_06309684.1| protein of unknown function DUF88 [Cylindrospermopsis raciborskii
CS-505]
gi|281193386|gb|EFA68368.1| protein of unknown function DUF88 [Cylindrospermopsis raciborskii
CS-505]
Length = 173
Score = 190 bits (484), Expect = 6e-47, Method: Composition-based stats.
Identities = 51/180 (28%), Positives = 98/180 (54%), Gaps = 13/180 (7%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA---IVIRAYYYTTVVGDPE 57
M P ++++F+DG N++ + + G+ D R++L+ F++ +I A++YT + +
Sbjct: 1 MVLPMSRLSIFVDGNNMFYAQQKNGWFFDPRRVLEYFKNEQPETTLINAFWYTGLKDPQD 60
Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHL 116
Q D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +
Sbjct: 61 Q-----RGFRDALISLGYTVRTKILKEYYDDVSGRYSQKANLDIEIVVDMFNTVDQYDRV 115
Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
V+FSGDG F + L+ K +T+VST M + +LR D ++DL ++++I +
Sbjct: 116 VLFSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDQIEKT 171
>gi|325282672|ref|YP_004255213.1| hypothetical protein Deipr_0426 [Deinococcus proteolyticus MRP]
gi|324314481|gb|ADY25596.1| Domain of unknown function DUF88 [Deinococcus proteolyticus MRP]
Length = 214
Score = 190 bits (484), Expect = 6e-47, Method: Composition-based stats.
Identities = 56/171 (32%), Positives = 92/171 (53%), Gaps = 7/171 (4%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
++IALF+DGA++Y+++K LG++ D+RK+L+ FR R + A+YYT + P Q
Sbjct: 4 QRIALFVDGASIYSAAKRLGWNFDHRKVLEYFRERGRLHNAFYYTAL---PAQFDDKQKR 60
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
D L Y G+ V + +E + G ++S+D+EL D + + V+ SG G F
Sbjct: 61 FTDALTYMGYTVRTQPLRETVDESGVSYRQTSLDIELVTDLLTGLDHFDAAVLMSGGGGF 120
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
+ L+ + K+ +VS P M S +LR AD ++DL L+ R
Sbjct: 121 ERPLEVLRARGKRTVVVSI----PEMTSYELRNAADEYLDLRDLRQRFERP 167
>gi|22298340|ref|NP_681587.1| hypothetical protein tll0798 [Thermosynechococcus elongatus BP-1]
gi|22294519|dbj|BAC08349.1| tll0798 [Thermosynechococcus elongatus BP-1]
Length = 176
Score = 190 bits (484), Expect = 6e-47, Method: Composition-based stats.
Identities = 49/178 (27%), Positives = 93/178 (52%), Gaps = 12/178 (6%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAI--VIRAYYYTTVVGDPEQ 58
M +E++++FIDG N++ + + G+ D R++L+ F ++ A++YT + +Q
Sbjct: 1 MLPAQERLSIFIDGNNMFYAQQKNGWFFDPRRVLEFFTRDPKIVLVNAFWYTGLKDMQDQ 60
Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHLV 117
D L G+ V K+ KE+ + G+ K+++D+E+ +D F + +V
Sbjct: 61 -----RSFRDALINLGYTVRTKLLKEYYDESLGKYYQKANLDIEIVIDMFNTVGQYDRVV 115
Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
+FSGDG F + L+ K +T+VST M + +LR D ++DL ++ I +
Sbjct: 116 LFSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNEIRPFIEK 169
>gi|119511234|ref|ZP_01630350.1| hypothetical protein N9414_18593 [Nodularia spumigena CCY9414]
gi|119464112|gb|EAW45033.1| hypothetical protein N9414_18593 [Nodularia spumigena CCY9414]
Length = 173
Score = 190 bits (483), Expect = 9e-47, Method: Composition-based stats.
Identities = 52/179 (29%), Positives = 96/179 (53%), Gaps = 13/179 (7%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAF---RSRAIVIRAYYYTTVVGDPE 57
M P ++++F+DG N++ + + G+ D R++L F +S +I A++YT + +
Sbjct: 1 MGSPMNRLSIFVDGNNMFYAQQKNGWFFDPRRVLDYFKHEQSDTTLINAFWYTGLKDPQD 60
Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHL 116
Q D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +
Sbjct: 61 Q-----RGFRDALISLGYTVRTKILKEYYDDSSGRYSQKANLDIEIVVDMFNTVDQYDRV 115
Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
V+FSGDG F + L+ K +T+VST M + +LR D ++DL +++ I +
Sbjct: 116 VLFSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDSIEK 170
>gi|254413060|ref|ZP_05026832.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
gi|196180224|gb|EDX75216.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
Length = 172
Score = 189 bits (482), Expect = 1e-46, Method: Composition-based stats.
Identities = 50/179 (27%), Positives = 95/179 (53%), Gaps = 12/179 (6%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAI--VIRAYYYTTVVGDPEQ 58
M +I++F+DG N++ + + G+ D +++L+ FR ++ A++YT + +Q
Sbjct: 1 MPCSMNRISIFVDGNNMFYAQQKNGWFFDPKRVLEYFRKEPHIVLVNAFWYTGLKDPQDQ 60
Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHLV 117
D L G+ V K+ KE+ ++ GR K+++D+E+ VD F E + ++
Sbjct: 61 -----RGFRDALISLGYTVRTKILKEYYDDSSGRYSQKANLDIEIVVDMFNTVEQYDRVI 115
Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
+FSGDG F + L+ K +T+VST M + +LR D ++DL +++ I +
Sbjct: 116 LFSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDYIEKT 170
>gi|282899662|ref|ZP_06307626.1| protein of unknown function DUF88 [Cylindrospermopsis raciborskii
CS-505]
gi|281195541|gb|EFA70474.1| protein of unknown function DUF88 [Cylindrospermopsis raciborskii
CS-505]
Length = 230
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 57/173 (32%), Positives = 90/173 (52%), Gaps = 12/173 (6%)
Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
R ++A+FIDG NL+ ++ +G +IDY KLL + ++RA++YT V E+Q
Sbjct: 55 NRGRVAIFIDGLNLFHAALQIGIEIDYVKLLCRLTQTSRLLRAFFYTGVDTSKEKQ---- 110
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L W+ NG++VV K TE+ K +++VE+AVD + + V+ SGDG
Sbjct: 111 QGFLLWMRRNGYRVVTKDIIALTESG----KKPNLNVEIAVDMITLAPYYDTAVLVSGDG 166
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
V A+ +V ++ +M SD L ADYF+D +K I +D
Sbjct: 167 DLAYAVNAVTSLGSRVEVI----GLQTMTSDSLIDVADYFIDFDSIKQYIQKD 215
>gi|172038230|ref|YP_001804731.1| hypothetical protein cce_3317 [Cyanothece sp. ATCC 51142]
gi|171699684|gb|ACB52665.1| unknown [Cyanothece sp. ATCC 51142]
Length = 178
Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats.
Identities = 50/176 (28%), Positives = 95/176 (53%), Gaps = 12/176 (6%)
Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAI--VIRAYYYTTVVGDPEQQFS 61
+E++++F+DG N++ + + G+ D R++L F + +I A++YT + +Q
Sbjct: 10 QKERLSIFVDGNNMFYAQQKNGWFFDPRRVLDYFTNDPHVSLINAFWYTGLKDSQDQ--- 66
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +++FS
Sbjct: 67 --RGFRDALISLGYTVRTKILKEYYDDTSGRYSQKANLDIEIVVDMFNTVDQYDRVILFS 124
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
GDG F + L+ K +T+VST M + +LR D ++DL +K+ I +
Sbjct: 125 GDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIKDSIEKQ 176
>gi|67925984|ref|ZP_00519254.1| Protein of unknown function DUF88 [Crocosphaera watsonii WH 8501]
gi|67852173|gb|EAM47662.1| Protein of unknown function DUF88 [Crocosphaera watsonii WH 8501]
Length = 178
Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats.
Identities = 50/176 (28%), Positives = 95/176 (53%), Gaps = 12/176 (6%)
Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAI--VIRAYYYTTVVGDPEQQFS 61
+E++++F+DG N++ + + G+ D R++L F + +I A++YT + +Q
Sbjct: 10 QKERLSIFVDGNNMFYAQQKNGWFFDPRRVLDYFTNDPHVSLINAFWYTGLKDSQDQ--- 66
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +++FS
Sbjct: 67 --RGFRDALISLGYTVRTKILKEYYDDTSGRYSQKANLDIEIVVDMFNTVDQYDRVILFS 124
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
GDG F + L+ K +T+VST M + +LR D ++DL +K+ I +
Sbjct: 125 GDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIKDSIEKQ 176
>gi|298492621|ref|YP_003722798.1| hypothetical protein Aazo_4322 ['Nostoc azollae' 0708]
gi|298234539|gb|ADI65675.1| protein of unknown function DUF88 ['Nostoc azollae' 0708]
Length = 173
Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats.
Identities = 50/180 (27%), Positives = 97/180 (53%), Gaps = 13/180 (7%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA---IVIRAYYYTTVVGDPE 57
M ++++F+DG N++ + + G+ D R++L+ F++ +I A++YT + +
Sbjct: 1 MGSMMNRLSIFVDGNNMFYAQQKNGWFFDPRRVLEYFKNEQPETTLINAFWYTGLKDPQD 60
Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHL 116
Q D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +
Sbjct: 61 Q-----RGFRDALISLGYTVRTKILKEYYDDVSGRYSQKANLDIEIVVDMFNTVDQYDRV 115
Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
V+FSGDG F + L+ K +T+VST M + +LR D ++DL ++++I +
Sbjct: 116 VLFSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDQIEKT 171
>gi|240139942|ref|YP_002964419.1| hypothetical protein MexAM1_META1p3405 [Methylobacterium extorquens
AM1]
gi|240009916|gb|ACS41142.1| Conserved hypothetical protein (DUF88) [Methylobacterium extorquens
AM1]
Length = 168
Score = 188 bits (479), Expect = 2e-46, Method: Composition-based stats.
Identities = 64/124 (51%), Positives = 97/124 (78%)
Query: 56 PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEH 115
+Q++S + PL+DWL YNG++VV K KEFT++ GR+++K +MD+ELA+DA E + ++H
Sbjct: 3 EDQEYSSIRPLIDWLDYNGYRVVTKPVKEFTDSAGRRKIKGNMDIELAIDALELAPHIDH 62
Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
+V+FSGDG F +LV A+QR+ +V++VST+ + P+M +D LRRQAD F+DLA+L + I R
Sbjct: 63 MVLFSGDGDFRSLVEAIQRRGVRVSVVSTIQTQPAMIADDLRRQADEFIDLAHLASRIGR 122
Query: 176 DPDE 179
DP E
Sbjct: 123 DPSE 126
>gi|220910043|ref|YP_002485354.1| hypothetical protein Cyan7425_4688 [Cyanothece sp. PCC 7425]
gi|219866654|gb|ACL46993.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7425]
Length = 172
Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats.
Identities = 50/172 (29%), Positives = 93/172 (54%), Gaps = 12/172 (6%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAI--VIRAYYYTTVVGDPEQQFSPLH 64
++++F+DG N++ + + G+ D R++L F S ++ A++YT + +Q
Sbjct: 7 RVSIFVDGNNMFYAQQKNGWFFDPRRVLDYFTSEPSVTLVNAFWYTGLKDPQDQ-----R 61
Query: 65 PLLDWLHYNGFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
D L G+ V K+ KE+ +N GR K+++D+E+ VD F E + +++FSGDG
Sbjct: 62 GFRDALISLGYTVRTKILKEYYDDNSGRYSQKANLDIEIVVDMFNTVEQYDRVILFSGDG 121
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
F + L+ K +T+VST M + +LR D ++DL ++ +I +
Sbjct: 122 DFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRPKIEK 169
>gi|16332216|ref|NP_442944.1| hypothetical protein slr0755 [Synechocystis sp. PCC 6803]
gi|1653846|dbj|BAA18756.1| slr0755 [Synechocystis sp. PCC 6803]
Length = 185
Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats.
Identities = 48/175 (27%), Positives = 93/175 (53%), Gaps = 12/175 (6%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA--IVIRAYYYTTVVGDPEQQFSP 62
R+++++F+DG N++ + + G+ D R++L F ++ A++YT + +Q
Sbjct: 11 RDRLSIFVDGNNMFYAQQKNGWFFDPRRVLSFFTEDPSVKLVNAFWYTGLKDTQDQ---- 66
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
D L G+ V K+ KE+ ++ G+ K+++D+E+ VD F + + +V+FSG
Sbjct: 67 -RGFRDALISLGYTVRTKILKEYYDDISGKYSQKANLDIEIVVDMFNTVDQYDRVVLFSG 125
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
DG F + L+ K +T+VST M + +LR D ++DL ++ I +
Sbjct: 126 DGDFERAIELLRSKSTHITVVST----EGMIARELRNATDRYIDLNDIRPAIEKQ 176
>gi|186681406|ref|YP_001864602.1| hypothetical protein Npun_F0925 [Nostoc punctiforme PCC 73102]
gi|186463858|gb|ACC79659.1| protein of unknown function DUF88 [Nostoc punctiforme PCC 73102]
Length = 169
Score = 188 bits (477), Expect = 4e-46, Method: Composition-based stats.
Identities = 50/176 (28%), Positives = 96/176 (54%), Gaps = 13/176 (7%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAF---RSRAIVIRAYYYTTVVGDPEQQFS 61
++++F+DG N++ + + G+ D R++L+ F +S +I A++YT + +Q
Sbjct: 1 MNRLSIFVDGNNMFYAQQKNGWFFDPRRVLEYFKHEQSETTLINAFWYTGLKDPQDQ--- 57
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +V+FS
Sbjct: 58 --RGFRDALISLGYTVRTKILKEYYDDTSGRYSQKANLDIEIVVDMFNTVDQYDRVVLFS 115
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
GDG F + L+ K +T+VST M + +LR D ++DL ++++I +
Sbjct: 116 GDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDQIEKT 167
>gi|56752213|ref|YP_172914.1| hypothetical protein syc2204_c [Synechococcus elongatus PCC 6301]
gi|81300700|ref|YP_400908.1| hypothetical protein Synpcc7942_1891 [Synechococcus elongatus PCC
7942]
gi|56687172|dbj|BAD80394.1| hypothetical protein [Synechococcus elongatus PCC 6301]
gi|81169581|gb|ABB57921.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942]
gi|121309776|dbj|BAF44194.1| LabA [Synechococcus elongatus PCC 7942]
Length = 186
Score = 186 bits (474), Expect = 9e-46, Method: Composition-based stats.
Identities = 51/179 (28%), Positives = 93/179 (51%), Gaps = 13/179 (7%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAI--VIRAYYYTTVVGDPEQQFSPLH 64
++A+FIDG N++ + + G+ D R++L F +R ++ AY+YT + +Q
Sbjct: 7 RLAIFIDGNNMFYAQQKNGWFFDPRRVLNYFANRPEIELVNAYWYTGLKDPQDQ-----R 61
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCG--RKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
D L G+ V K+ KEF + R ++++D+E+ +D F E + +V+FSGD
Sbjct: 62 GFRDALVSLGYTVRTKMLKEFHDESNGNRYFQRANLDIEIVIDMFNTVEQYDEIVLFSGD 121
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
G F + L+ K +T+VST M + +LR D ++DL +++ I + +
Sbjct: 122 GDFERAIELLRAKQTHITVVST----DGMIARELRNATDRYIDLNDIRSFIEKTERPEP 176
>gi|113477728|ref|YP_723789.1| hypothetical protein Tery_4322 [Trichodesmium erythraeum IMS101]
gi|110168776|gb|ABG53316.1| protein of unknown function DUF88 [Trichodesmium erythraeum IMS101]
Length = 171
Score = 184 bits (467), Expect = 6e-45, Method: Composition-based stats.
Identities = 50/177 (28%), Positives = 94/177 (53%), Gaps = 11/177 (6%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA-IVIRAYYYTTVVGDPEQQ 59
M ++++F+DG N++ + + G+ D R++L+ F +I A++YT + +Q
Sbjct: 1 MKISMNRLSIFVDGNNMFYAQQKNGWFFDPRRVLEYFNKPEVKLINAFWYTGLKDPQDQ- 59
Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLVI 118
D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +V+
Sbjct: 60 ----RGFRDALISLGYTVRTKILKEYYDDVSGRYSQKANLDIEIVVDMFNTVDQYDEVVL 115
Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
FSGDG F + L+ K +T+VST M + +LR D ++DL ++ +I +
Sbjct: 116 FSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDQYVDLNDIRYQIEK 168
>gi|86607567|ref|YP_476329.1| hypothetical protein CYB_0065 [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86556109|gb|ABD01066.1| conserved hypothetical protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 175
Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats.
Identities = 52/181 (28%), Positives = 93/181 (51%), Gaps = 15/181 (8%)
Query: 1 MFD--PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRS---RAIVIRAYYYTTVVGD 55
MF P ++++FIDG N++ + + G+ D R++L F ++ A++YT +
Sbjct: 1 MFYHHPVTRVSIFIDGNNMFYAQQKNGWFFDPRRVLDYFVRSQPNVELVNAFWYTGIKDP 60
Query: 56 PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTE-NCGRKRVKSSMDVELAVDAFEQSEGLE 114
+Q D L GF V K+ KE+ + + GR K+++D+E+ +D F +
Sbjct: 61 HDQ-----RAFRDALISMGFTVRTKILKEYRDEDSGRYSQKANLDIEIVIDMFNTVGQYD 115
Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
+++FSGDG F V L+ K +T+VST M + +LR D ++DL ++ I
Sbjct: 116 RIILFSGDGDFERAVELLRSKNTLITVVST----EGMIARELRNATDRYIDLNDIRPYIE 171
Query: 175 R 175
+
Sbjct: 172 K 172
>gi|158333892|ref|YP_001515064.1| hypothetical protein AM1_0704 [Acaryochloris marina MBIC11017]
gi|158304133|gb|ABW25750.1| conserved hypothetical protein [Acaryochloris marina MBIC11017]
Length = 172
Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats.
Identities = 46/173 (26%), Positives = 90/173 (52%), Gaps = 12/173 (6%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAI--VIRAYYYTTVVGDPEQQFSPLH 64
+ ++F+DG N++ + + G+ D R++L F +I A++YT + +Q
Sbjct: 7 RTSIFVDGNNMFYAQQKNGWFFDPRRILNYFTEPTDVRLINAFWYTGLKDPQDQ-----R 61
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
D L G+ V K+ KE+ ++ GR K+++D+E+ +D F + + +++ SGDG
Sbjct: 62 GFRDALISLGYTVRTKILKEYYDDSSGRYSQKANLDIEIVIDMFNTVDQYDQVILLSGDG 121
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
F + L+ K +T+VST M + +LR D ++DL +++ I +
Sbjct: 122 DFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNKIRDRIEKT 170
>gi|170077971|ref|YP_001734609.1| hypothetical protein SYNPCC7002_A1357 [Synechococcus sp. PCC 7002]
gi|169885640|gb|ACA99353.1| Protein of unknown function (PF01936) [Synechococcus sp. PCC 7002]
Length = 172
Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats.
Identities = 51/178 (28%), Positives = 93/178 (52%), Gaps = 13/178 (7%)
Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA--IVIRAYYYTTVVGDPEQQ 59
F R ++++F+DG N++ + + + D R++L F +I A++YT + +Q
Sbjct: 3 FYQR-RLSIFVDGNNMFYAQQKNNWFFDPRRVLDYFTCDPTVRLINAFWYTGLKDSQDQ- 60
Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLVI 118
D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +++
Sbjct: 61 ----RGFRDALISLGYTVRTKILKEYYDDVSGRYSQKANLDIEIVVDMFNTVDQYDQVIL 116
Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
FSGDG F + L+ K +T+VST M + +LR D ++DL L+ EI +
Sbjct: 117 FSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDCYIDLNNLRAEIEKT 170
>gi|86605299|ref|YP_474062.1| hypothetical protein CYA_0583 [Synechococcus sp. JA-3-3Ab]
gi|86553841|gb|ABC98799.1| conserved hypothetical protein [Synechococcus sp. JA-3-3Ab]
Length = 174
Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats.
Identities = 52/180 (28%), Positives = 93/180 (51%), Gaps = 14/180 (7%)
Query: 1 MF-DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRS---RAIVIRAYYYTTVVGDP 56
MF P ++++FIDG N++ + + G+ D R++L F ++ A++YT +
Sbjct: 1 MFRHPVTRVSIFIDGNNMFYAQQKNGWFFDPRRVLDYFVRSQPNVELVNAFWYTGIKDPN 60
Query: 57 EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTE-NCGRKRVKSSMDVELAVDAFEQSEGLEH 115
+Q D L GF V K+ KE+ + + GR K+++D+E+ +D F +
Sbjct: 61 DQ-----RAFRDALISLGFTVRTKILKEYRDEDSGRYSQKANLDIEIVIDMFNTVGQYDR 115
Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
+++FSGDG F V L+ K +T+VST M + +LR D ++DL ++ I +
Sbjct: 116 IILFSGDGDFERAVELLRSKNTLITVVST----EGMIARELRNATDRYIDLNDIRPYIEK 171
>gi|209528287|ref|ZP_03276748.1| protein of unknown function DUF88 [Arthrospira maxima CS-328]
gi|284053607|ref|ZP_06383817.1| hypothetical protein AplaP_19301 [Arthrospira platensis str.
Paraca]
gi|209491273|gb|EDZ91667.1| protein of unknown function DUF88 [Arthrospira maxima CS-328]
gi|291565674|dbj|BAI87946.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 173
Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats.
Identities = 52/179 (29%), Positives = 97/179 (54%), Gaps = 13/179 (7%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA---IVIRAYYYTTVVGDPE 57
M + R ++++F+DG N++ + + G+ D R++L F+ I I A++YT + +
Sbjct: 1 MPNLRNRLSIFVDGNNMFYAQQKNGWFFDPRRVLDYFKHEQADLIFINAFWYTGLKDPQD 60
Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHL 116
Q D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +
Sbjct: 61 Q-----RGFRDALISLGYTVRTKILKEYYDDSSGRYSQKANLDIEIVVDMFNTVDQYDRV 115
Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
V+FSGDG F + L+ K +T+VST M + +LR D ++DL ++++I +
Sbjct: 116 VLFSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDQIEK 170
>gi|193782651|ref|NP_435936.2| hypothetical protein SMa1264 [Sinorhizobium meliloti 1021]
gi|46403700|gb|AAS92906.1| hypothetical protein [Sinorhizobium meliloti]
gi|193073107|gb|AAK65348.2| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
Length = 177
Score = 181 bits (459), Expect = 5e-44, Method: Composition-based stats.
Identities = 73/145 (50%), Positives = 103/145 (71%), Gaps = 2/145 (1%)
Query: 35 KAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRV 94
+ F S I YY +V D Q+ + L+DWL YNG+Q+V K +EFT+ GR+R+
Sbjct: 18 RLFGSAPICCGGNYYAPLVED--QETPTIRLLIDWLDYNGYQMVTKPIREFTDTLGRRRI 75
Query: 95 KSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASD 154
K +MD++LA+DA E ++ +HLVIFSGDG FT++VAALQRK +VT+VST+ + P M S
Sbjct: 76 KGNMDIDLAIDAIELAKTADHLVIFSGDGNFTSVVAALQRKGCRVTVVSTMATRPPMISG 135
Query: 155 QLRRQADYFMDLAYLKNEIARDPDE 179
+LRR+AD+F+DLA L+ EIAR+ E
Sbjct: 136 ELRREADHFIDLAKLRGEIAREHAE 160
>gi|332711770|ref|ZP_08431701.1| hypothetical protein LYNGBM3L_65720 [Lyngbya majuscula 3L]
gi|332349748|gb|EGJ29357.1| hypothetical protein LYNGBM3L_65720 [Lyngbya majuscula 3L]
Length = 165
Score = 180 bits (458), Expect = 6e-44, Method: Composition-based stats.
Identities = 49/169 (28%), Positives = 92/169 (54%), Gaps = 12/169 (7%)
Query: 10 LFIDGANLYASSKALGFDIDYRKLLKAFRSRA--IVIRAYYYTTVVGDPEQQFSPLHPLL 67
+F+DG N++ + + G+ D R++L F++ ++ A++YT + +Q
Sbjct: 3 IFVDGNNMFYAQQKNGWFFDPRRVLDYFKNEPGITLVNAFWYTGLKDPQDQ-----RGFR 57
Query: 68 DWLHYNGFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126
D L G+ V K+ KE+ +N GR K+++D+E+ VD F E + +++FSGDG F
Sbjct: 58 DALISLGYTVRTKILKEYYDDNSGRYSQKANLDIEIVVDMFNTVEQYDKVILFSGDGDFE 117
Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
+ L+ K +T+VST M + +LR D ++DL ++++I +
Sbjct: 118 RAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDVRDQIEK 162
>gi|113969424|ref|YP_733217.1| hypothetical protein Shewmr4_1080 [Shewanella sp. MR-4]
gi|113884108|gb|ABI38160.1| protein of unknown function DUF88 [Shewanella sp. MR-4]
Length = 184
Score = 176 bits (448), Expect = 8e-43, Method: Composition-based stats.
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 13/167 (7%)
Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
+P ++IALF+D N+Y + + A +Y KL + ++ ++ A Y GD Q
Sbjct: 26 NPLKRIALFVDVQNIYYTCREAYQRQFNYCKLWQQLSAQGEIVSAIAYAIHRGDDGQL-- 83
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
D L + GF++ K + ++ K DV + +D E + ++ +++ SG
Sbjct: 84 ---KFQDALRHIGFELKLKPFIQRSDGS----AKGDWDVGITIDVLEMAPEVDTVILLSG 136
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
DG F L+ +++K I + V PS+ + L A F +
Sbjct: 137 DGDFALLLDKIRQKYA---IEAEVYGVPSLTAKSLMEAASCFHPIEE 180
>gi|319959046|gb|ADV90687.1| LabA [Nostoc linckia EC102]
gi|319959048|gb|ADV90688.1| LabA [Nostoc linckia EC105]
gi|319959050|gb|ADV90689.1| LabA [Nostoc linckia EC106]
gi|319959052|gb|ADV90690.1| LabA [Nostoc linckia EC109]
gi|319959054|gb|ADV90691.1| LabA [Nostoc linckia EC113]
gi|319959056|gb|ADV90692.1| LabA [Nostoc linckia EC119]
gi|319959058|gb|ADV90693.1| LabA [Nostoc linckia EC121]
gi|319959060|gb|ADV90694.1| LabA [Nostoc linckia EC205]
gi|319959062|gb|ADV90695.1| LabA [Nostoc linckia EC206]
gi|319959064|gb|ADV90696.1| LabA [Nostoc linckia EC220]
gi|319959066|gb|ADV90697.1| LabA [Nostoc linckia EC221]
gi|319959068|gb|ADV90698.1| LabA [Nostoc linckia EC222]
gi|319959070|gb|ADV90699.1| LabA [Nostoc linckia EC326]
gi|319959072|gb|ADV90700.1| LabA [Nostoc linckia NK217]
gi|319959074|gb|ADV90701.1| LabA [Nostoc linckia EC501]
gi|319959076|gb|ADV90702.1| LabA [Nostoc linckia EC505]
gi|319959078|gb|ADV90703.1| LabA [Nostoc linckia EC519]
gi|319959080|gb|ADV90704.1| LabA [Nostoc linckia EC521]
gi|319959082|gb|ADV90705.1| LabA [Nostoc linckia EC602]
gi|319959084|gb|ADV90706.1| LabA [Nostoc linckia EC724]
gi|319959086|gb|ADV90707.1| LabA [Nostoc linckia EC204]
gi|319959090|gb|ADV90709.1| LabA [Nostoc linckia EC210]
gi|319959092|gb|ADV90710.1| LabA [Nostoc linckia EC322]
gi|319959096|gb|ADV90712.1| LabA [Nostoc linckia NK207]
gi|319959098|gb|ADV90713.1| LabA [Nostoc linckia EC703]
gi|319959100|gb|ADV90714.1| LabA [Nostoc linckia EC720]
Length = 173
Score = 173 bits (440), Expect = 8e-42, Method: Composition-based stats.
Identities = 49/157 (31%), Positives = 81/157 (51%), Gaps = 12/157 (7%)
Query: 23 ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVA 82
LG +IDY KLL + ++RA++YT V E+Q L W+ NG++V+AK
Sbjct: 2 QLGIEIDYTKLLCRLTGGSRLLRAFFYTGVDRTNEKQ----QGFLLWMRRNGYRVIAKDL 57
Query: 83 KEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIV 142
+ + K+++DVE+AVD + + V+ SGDG V ++ + +V +V
Sbjct: 58 VQLPDGS----KKANLDVEIAVDMMALVDSYDTAVLVSGDGDLAYAVNSVSYRGVRVEVV 113
Query: 143 STVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
S SM SD L +D ++DL +K +I + P +
Sbjct: 114 SL----RSMTSDSLINVSDRYIDLEAIKEDIQKTPRQ 146
>gi|119776250|ref|YP_928990.1| hypothetical protein Sama_3118 [Shewanella amazonensis SB2B]
gi|119768750|gb|ABM01321.1| conserved hypothetical protein [Shewanella amazonensis SB2B]
Length = 157
Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 13/165 (7%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+KIALF+D N+Y + + A +YRKL + S ++ A Y D Q
Sbjct: 1 MKKIALFVDVQNIYYTCREAYQRQFNYRKLWQQLCSEGEIVSATAYAIHRSDDGQL---- 56
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
D L + GF++ K + ++ K DV + +D E + ++ +++ SGDG
Sbjct: 57 -KFQDALRHIGFELKLKPFIQRSDGS----AKGDWDVGITIDVLETAPEVDTVILLSGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
F L+ +++K + + V PS+ + L A F +
Sbjct: 112 DFALLLDKIRQKYA---VEAEVYGVPSLTAKSLMEAASRFHPIDE 153
>gi|146293884|ref|YP_001184308.1| hypothetical protein Sputcn32_2790 [Shewanella putrefaciens CN-32]
gi|145565574|gb|ABP76509.1| protein of unknown function DUF88 [Shewanella putrefaciens CN-32]
Length = 157
Score = 171 bits (435), Expect = 3e-41, Method: Composition-based stats.
Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 13/165 (7%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+KIALF+D N+Y + + A G +YRKL + ++ A Y GD Q
Sbjct: 1 MKKIALFVDVQNIYYTCREAYGRQFNYRKLWQHLGYEGDIVLAVAYAIHKGDDGQL---- 56
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
D L + GF+V K + ++ K DV + +D E + ++ +++ SGDG
Sbjct: 57 -KFQDALKHIGFEVKLKPFIQRSDGS----AKGDWDVGITIDIMEAASEVDTVILLSGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
F L LQ+ +K + + V P++ + LR A F +
Sbjct: 112 DFDLL---LQKIHQKYGVETQVYGVPTLTAKSLRDAASQFHPIDE 153
>gi|319959094|gb|ADV90711.1| LabA [Nostoc linckia NK105]
Length = 160
Score = 171 bits (435), Expect = 3e-41, Method: Composition-based stats.
Identities = 49/157 (31%), Positives = 81/157 (51%), Gaps = 12/157 (7%)
Query: 23 ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVA 82
LG +IDY KLL + ++RA++YT V E+Q L W+ NG++V+AK
Sbjct: 2 QLGIEIDYTKLLCRLTGGSRLLRAFFYTGVDRTNEKQ----QGFLLWMRRNGYRVIAKDL 57
Query: 83 KEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIV 142
+ + K+++DVE+AVD + + V+ SGDG V ++ + +V +V
Sbjct: 58 VQLPDGS----KKANLDVEIAVDMMALVDSYDTAVLVSGDGDLAYAVNSVSYRGVRVEVV 113
Query: 143 STVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
S SM SD L +D ++DL +K +I + P +
Sbjct: 114 SL----RSMTSDSLINVSDRYLDLEAIKEDIQKTPRQ 146
>gi|114046654|ref|YP_737204.1| hypothetical protein Shewmr7_1148 [Shewanella sp. MR-7]
gi|113888096|gb|ABI42147.1| protein of unknown function DUF88 [Shewanella sp. MR-7]
Length = 157
Score = 171 bits (435), Expect = 3e-41, Method: Composition-based stats.
Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 13/164 (7%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+KIALF+D N+Y + + A +YRKL + ++ ++ A Y GD Q
Sbjct: 1 MKKIALFVDVQNIYYTCREAYQRQFNYRKLWQQLSTQGEIVSAIAYAIHRGDDGQL---- 56
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
D L + GF++ K + ++ K DV + +D E + ++ +++ SGDG
Sbjct: 57 -KFQDALRHIGFELKLKPFIQRSDGS----AKGDWDVGITIDVLEMAPEVDTVILLSGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
F L+ +++K + + V PS+ + L A F+ +
Sbjct: 112 DFALLLDKIRQKYA---VEAEVYGVPSLTAKSLMDAATQFIPIT 152
>gi|117919529|ref|YP_868721.1| hypothetical protein Shewana3_1080 [Shewanella sp. ANA-3]
gi|117611861|gb|ABK47315.1| protein of unknown function DUF88 [Shewanella sp. ANA-3]
Length = 170
Score = 171 bits (434), Expect = 3e-41, Method: Composition-based stats.
Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 13/166 (7%)
Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
P +KIALF+D N+Y + + A +YRKL + ++ ++ A Y GD Q
Sbjct: 12 YPLKKIALFVDVQNIYYTCREAYQRQFNYRKLWQQLSAQGEIVSAIAYAIHRGDDGQL-- 69
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
D L + GF++ K + ++ K DV + +D E + ++ +++ SG
Sbjct: 70 ---KFQDALRHIGFELKLKPFIQRSDGS----AKGDWDVGITIDVLEMAPEVDTVILLSG 122
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
DG F L+ +++K I + V PS+ + L A F +
Sbjct: 123 DGDFALLLDKIRQKYA---IEAEVYGVPSLTAKSLMDAATRFTPIT 165
>gi|120598045|ref|YP_962619.1| hypothetical protein Sputw3181_1222 [Shewanella sp. W3-18-1]
gi|120558138|gb|ABM24065.1| protein of unknown function DUF88 [Shewanella sp. W3-18-1]
Length = 157
Score = 171 bits (434), Expect = 4e-41, Method: Composition-based stats.
Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 13/165 (7%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+KIALF+D N+Y + + A G +YRKL + ++ A Y GD Q
Sbjct: 1 MKKIALFVDVQNIYYTCREAYGRQFNYRKLWQHLGYEGDIVLAVAYAIHKGDDGQL---- 56
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
D L + GF+V K + ++ K DV + +D E + ++ +++ SGDG
Sbjct: 57 -KFQDALKHIGFEVKLKPFIQRSDGS----AKGDWDVGITIDIMEAASEVDTVILLSGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
F L LQ+ +K + + V P++ + LR A F +
Sbjct: 112 DFDLL---LQKIYQKYGVETQVYGVPTLTAKSLRDAASQFHPIDE 153
>gi|269837665|ref|YP_003319893.1| hypothetical protein Sthe_1637 [Sphaerobacter thermophilus DSM
20745]
gi|269786928|gb|ACZ39071.1| protein of unknown function DUF88 [Sphaerobacter thermophilus DSM
20745]
Length = 201
Score = 171 bits (434), Expect = 4e-41, Method: Composition-based stats.
Identities = 59/162 (36%), Positives = 83/162 (51%), Gaps = 12/162 (7%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
+K+A+F D +NLY +++ LG IDY +LL + RAY Y V D P
Sbjct: 8 DKVAVFFDMSNLYFAARDLGIKIDYTRLLDFIVGGRRLHRAYAYMAVAPDDNTAV----P 63
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
L WL NGF+V+ K + +++ K +D+ELAVD Q+ ++ VI SGDG F
Sbjct: 64 FLTWLRRNGFRVITKTLRRYSDG----TSKGDLDMELAVDLLSQAPYIDVAVIVSGDGDF 119
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
T LV QR +V I ST P + L AD ++DL
Sbjct: 120 TYLVDRAQRLGLRVEIAST----PRYTATDLMEIADRYIDLE 157
>gi|319427256|gb|ADV55330.1| conserved hypothetical protein [Shewanella putrefaciens 200]
Length = 157
Score = 171 bits (433), Expect = 5e-41, Method: Composition-based stats.
Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 13/165 (7%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+KIALF+D N+Y + + A G +YRKL + ++ A Y GD Q
Sbjct: 1 MKKIALFVDVQNIYYTCREAYGRQFNYRKLWQHLGYEGDIVLAVAYAIHKGDDGQL---- 56
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
D L + GF+V K + ++ K DV + +D E + ++ +++ SGDG
Sbjct: 57 -KFQDALKHIGFEVKLKPFIQRSDGS----AKGDWDVGITIDIMEAASEVDTVILLSGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
F L LQ+ +K + + V P++ + LR A F +
Sbjct: 112 DFDLL---LQKIHQKYWVETQVYGVPTLTAKSLRDAASQFHPIDE 153
>gi|126175377|ref|YP_001051526.1| hypothetical protein Sbal_3176 [Shewanella baltica OS155]
gi|304410207|ref|ZP_07391826.1| hypothetical protein Sbal183DRAFT_1664 [Shewanella baltica OS183]
gi|307302082|ref|ZP_07581840.1| hypothetical protein Sbal175DRAFT_0340 [Shewanella baltica BA175]
gi|125998582|gb|ABN62657.1| protein of unknown function DUF88 [Shewanella baltica OS155]
gi|304351616|gb|EFM16015.1| hypothetical protein Sbal183DRAFT_1664 [Shewanella baltica OS183]
gi|306914120|gb|EFN44541.1| hypothetical protein Sbal175DRAFT_0340 [Shewanella baltica BA175]
Length = 157
Score = 170 bits (431), Expect = 8e-41, Method: Composition-based stats.
Identities = 45/165 (27%), Positives = 74/165 (44%), Gaps = 13/165 (7%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+KIALF+D N+Y + + A G +YRKL + + A Y GD Q
Sbjct: 1 MKKIALFVDVQNIYYTCREAYGRQFNYRKLWQHLGYEGDIALAVAYAIHKGDDGQL---- 56
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
D L + GF+V K + ++ K DV + +D E + ++ +++ SGDG
Sbjct: 57 -KFQDALKHIGFEVKLKPFIQRSDGS----AKGDWDVGITIDIMEAASEVDTVILLSGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
F L LQ+ +K + + V P++ + LR A F +
Sbjct: 112 DFDLL---LQKIHQKYGVETQVYGVPTLTAKSLRDAASQFHPIDE 153
>gi|110597861|ref|ZP_01386144.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031]
gi|110340586|gb|EAT59069.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031]
Length = 280
Score = 169 bits (430), Expect = 1e-40, Method: Composition-based stats.
Identities = 50/173 (28%), Positives = 92/173 (53%), Gaps = 9/173 (5%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
+ A+FIDGANL+ + + LG+ ID+ +L+ F + + A YY ++ +
Sbjct: 1 MGRAAVFIDGANLFYTQRHLGWQIDFSRLMAFFMTGYASVEANYYVPASEPVSEENAA-- 58
Query: 65 PLLDWLHYNGFQVVAKVAKE-FTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L +G+++++K K+ + G +K ++DVEL VDA SE + ++FSGD
Sbjct: 59 -FTRVLTAHGYRIISKPVKKIVNKETGEVIMKGNLDVELVVDALIGSEHYDTFILFSGDS 117
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD-YFMDLAYLKNEIAR 175
F L+ AL+ K K+V + ST +++ +L + + + DL+ L++ I
Sbjct: 118 DFLPLLRALKEKGKEVIVYST----QGLSARELLAEPNVTYFDLSLLRDRIGH 166
>gi|332306977|ref|YP_004434828.1| hypothetical protein Glaag_2619 [Glaciecola agarilytica
4H-3-7+YE-5]
gi|332174306|gb|AEE23560.1| hypothetical protein Glaag_2619 [Glaciecola agarilytica
4H-3-7+YE-5]
Length = 158
Score = 169 bits (430), Expect = 1e-40, Method: Composition-based stats.
Identities = 39/162 (24%), Positives = 75/162 (46%), Gaps = 13/162 (8%)
Query: 7 KIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
KIA+F+D N+Y +++ + +YRK + ++ ++ A Y T D +Q
Sbjct: 4 KIAVFVDVQNIYYTTRDSYQKQFNYRKFWQHLSAQGDIVIANAYATERHDTQQ-----QK 58
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
L + GF V K + ++ K DV + +D + + ++ +V+ SGDG F
Sbjct: 59 FQSALKHIGFNVKLKPFIQRSDGS----AKGDWDVGITIDVLDAAPHVDTVVLLSGDGDF 114
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
L+ A + K K + + V P++ + L D F+++
Sbjct: 115 DLLLKAAKDKYK---VGTKVYGVPALTASSLMNACDEFIEIT 153
>gi|254421306|ref|ZP_05035024.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
gi|196188795|gb|EDX83759.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
Length = 328
Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats.
Identities = 56/173 (32%), Positives = 89/173 (51%), Gaps = 12/173 (6%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
+ I +FIDG+NL+ ++ L ++DYR+LL + ++RAY+YT V E+Q
Sbjct: 168 QSNDLITIFIDGSNLFYAASHLNIEVDYRRLLTSLVRGRRLLRAYFYTGVDPQNEKQ--- 224
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
L WL+ +G +VV+K + K++M VE+AVD SE ++ + GD
Sbjct: 225 -RGFLLWLNRHGHRVVSKELTNLPDGS----RKANMHVEMAVDMMRISEYCSNITLLGGD 279
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
G + L ++ + +VS SM SD L AD + DLA L++ I R
Sbjct: 280 GNLAYALQVLSQRGTFIEVVSL----QSMTSDSLIDIADSYTDLADLRDRIKR 328
>gi|292655260|ref|YP_003535157.1| hypothetical protein HVO_1102 [Haloferax volcanii DS2]
gi|291371756|gb|ADE03983.1| Uncharacterized conserved protein [Haloferax volcanii DS2]
Length = 165
Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats.
Identities = 44/170 (25%), Positives = 80/170 (47%), Gaps = 14/170 (8%)
Query: 3 DPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
P +++A+ D NLY ++++ +IDY LL+ + + RA Y P++
Sbjct: 5 HPDQRVAILADAQNLYHTAQSLYSRNIDYSSLLQKGTAGRALTRAIAYVIRADSPDEV-- 62
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
D L GF+ K K F G K+ D+ +A+DA ++ ++ +V+ SG
Sbjct: 63 ---SFFDALVDIGFETKIKDIKTF----GDGSKKADWDLGIALDAVSLADHVDTVVLCSG 115
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
DG F L L+ + +V +++ +++L AD F+DL+ K
Sbjct: 116 DGDFERLCTHLRHEGVRVEVMAF----KESTAEELVAAADTFIDLSERKE 161
>gi|17232331|ref|NP_488879.1| hypothetical protein alr4839 [Nostoc sp. PCC 7120]
gi|17133976|dbj|BAB76538.1| alr4839 [Nostoc sp. PCC 7120]
Length = 157
Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats.
Identities = 46/163 (28%), Positives = 86/163 (52%), Gaps = 13/163 (7%)
Query: 17 LYASSKALGFDIDYRKLLKAF---RSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYN 73
++ + + G+ D R++L+ F +S +I A++YT + +Q D L
Sbjct: 1 MFYAQQKNGWFFDPRRVLEYFKNEQSETTLINAFWYTGLKDPQDQ-----RGFRDALISL 55
Query: 74 GFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAAL 132
G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +V+FSGDG F + L
Sbjct: 56 GYTVRTKILKEYCDDSSGRYSQKANLDIEIVVDMFNTVDQYDRVVLFSGDGDFERAIELL 115
Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
+ K +T+VST M + +LR D ++DL +++ I +
Sbjct: 116 RSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDRIEK 154
>gi|260773921|ref|ZP_05882836.1| hypothetical protein VIB_002400 [Vibrio metschnikovii CIP 69.14]
gi|260610882|gb|EEX36086.1| hypothetical protein VIB_002400 [Vibrio metschnikovii CIP 69.14]
Length = 157
Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 13/165 (7%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
EKIA+ +D N+Y + + G +Y + + V +A Y +P+Q
Sbjct: 1 MEKIAILVDVQNVYYTCRERYGRHFNYNQFWQQVTQGRHVFKANAYAIASKEPQQ----- 55
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF+V+ K + ++ K DV +A+DA+E ++ ++ +V+ SGDG
Sbjct: 56 RQFHHILRGVGFEVMLKPFIQRSDGS----AKGDWDVGIALDAYELAQQVDTVVLVSGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
F LV +Q++ + + V P + + L A F+ +
Sbjct: 112 DFEPLVERIQQRFQ---VKVEVYGVPRLTAQSLIDVASQFVPIEQ 153
>gi|262274163|ref|ZP_06051975.1| hypothetical protein VHA_001139 [Grimontia hollisae CIP 101886]
gi|262221973|gb|EEY73286.1| hypothetical protein VHA_001139 [Grimontia hollisae CIP 101886]
Length = 161
Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 44/169 (26%), Positives = 77/169 (45%), Gaps = 13/169 (7%)
Query: 1 MFDPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
M +KIA+F D N+Y +++ A G +YRKL + + V+ A Y D +Q
Sbjct: 1 MGFSLKKIAVFADVQNVYYTTRQAYGRQFNYRKLWQRLQEMGDVVCANAYAIRRDDDQQI 60
Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119
D L + GF+V K + ++ K DV +A+D E + ++ +V+
Sbjct: 61 -----KFQDALRHIGFEVKLKPYIQRSDGS----TKGDWDVGIAIDVMEMAPEVDTVVLL 111
Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
SGDG F L+ ++ + K + V P + ++ L D F+ +
Sbjct: 112 SGDGDFDLLMNKVRERYGK---EAIVFGVPMLTANSLINSVDRFIGIED 157
>gi|153001687|ref|YP_001367368.1| hypothetical protein Shew185_3175 [Shewanella baltica OS185]
gi|160876425|ref|YP_001555741.1| hypothetical protein Sbal195_3319 [Shewanella baltica OS195]
gi|217972380|ref|YP_002357131.1| hypothetical protein Sbal223_1195 [Shewanella baltica OS223]
gi|151366305|gb|ABS09305.1| protein of unknown function DUF88 [Shewanella baltica OS185]
gi|160861947|gb|ABX50481.1| protein of unknown function DUF88 [Shewanella baltica OS195]
gi|217497515|gb|ACK45708.1| protein of unknown function DUF88 [Shewanella baltica OS223]
gi|315268615|gb|ADT95468.1| hypothetical protein Sbal678_3326 [Shewanella baltica OS678]
Length = 157
Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats.
Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 13/164 (7%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+KIALF+D N+Y + + A G +YRKL + + A Y GD Q
Sbjct: 1 MKKIALFVDVQNIYYTCREAYGRQFNYRKLWQHLGYEGDIALAVAYAIHKGDDGQL---- 56
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
D L + GF+V K + ++ K DV + +D E + ++ +++ SGDG
Sbjct: 57 -KFQDALKHIGFEVKLKPFIQRSDGS----AKGDWDVGITIDIMEAASEVDTVILLSGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
F L LQ+ +K + + V P++ + LR A F +
Sbjct: 112 DFDLL---LQKIHQKYGVETQVYGVPTLTAKSLRDAASQFHPID 152
>gi|300712124|ref|YP_003737938.1| hypothetical protein HacjB3_13825 [Halalkalicoccus jeotgali B3]
gi|299125807|gb|ADJ16146.1| hypothetical protein HacjB3_13825 [Halalkalicoccus jeotgali B3]
Length = 165
Score = 168 bits (427), Expect = 2e-40, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 80/170 (47%), Gaps = 14/170 (8%)
Query: 3 DPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
P +++A+ +D NLY S+ + +IDY LL+ ++RA Y PE++
Sbjct: 5 HPNQRVAVLVDSQNLYHSAHSLYSRNIDYSALLEEAVGGRELVRAIAYVIRADSPEEE-- 62
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
+ L GF+ K K F G K+ DV +++DA + ++ +V+ +G
Sbjct: 63 ---SFFEALIDIGFETKIKDIKTF----GDGSKKADWDVGMSLDAVTLASHVDTVVLCTG 115
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
DG F+ L + L+ + +V +++ +++L D F+DL +
Sbjct: 116 DGDFSRLCSHLRHQGVRVEVMAL----GPSTAEELIEATDSFVDLTDREE 161
>gi|127512105|ref|YP_001093302.1| hypothetical protein Shew_1173 [Shewanella loihica PV-4]
gi|126637400|gb|ABO23043.1| protein of unknown function DUF88 [Shewanella loihica PV-4]
Length = 157
Score = 167 bits (425), Expect = 4e-40, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 73/164 (44%), Gaps = 13/164 (7%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
++IALF+D N+Y + + A G +Y + + + ++ A Y GD Q
Sbjct: 1 MKRIALFVDVQNIYYTCRQAYGRQFNYHAMWQRLNEQGEIVTALAYAIDRGDDGQI---- 56
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
D L + GF+V K + ++ K DV + +D E + ++ +V+ SGDG
Sbjct: 57 -KFQDALKHIGFEVKLKPYIQRSDGS----AKGDWDVGITIDIMEHAPEVDTVVLLSGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
F L+ + +K ++ + V P +++ L A F +
Sbjct: 112 DFALLLEHI---GRKYSLETEVYGVPELSAKALMDAATQFHPIE 152
>gi|262404166|ref|ZP_06080721.1| hypothetical protein VOA_002156 [Vibrio sp. RC586]
gi|262349198|gb|EEY98336.1| hypothetical protein VOA_002156 [Vibrio sp. RC586]
Length = 157
Score = 167 bits (425), Expect = 5e-40, Method: Composition-based stats.
Identities = 42/165 (25%), Positives = 78/165 (47%), Gaps = 13/165 (7%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
EKIA+ +D N+Y + + G DY + V++A Y DP+Q+
Sbjct: 1 MEKIAILVDVQNVYYTCRERYGRHFDYNQFWSQATQGRAVVKANAYAIASKDPQQR--QF 58
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
H +L + GF+V+ K + ++ K DV +A+D +E ++ ++ +V+ SGDG
Sbjct: 59 HHILRGI---GFEVMLKPFIQRSDGS----AKGDWDVGIALDGYELAQEVDTVVLVSGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
F LV +Q++ + + V P + + L A+ F + +
Sbjct: 112 DFEPLVTRIQQRFQ---VKVEVYGVPKLTAQNLIDVANQFHPIEH 153
>gi|167623131|ref|YP_001673425.1| hypothetical protein Shal_1197 [Shewanella halifaxensis HAW-EB4]
gi|167353153|gb|ABZ75766.1| protein of unknown function DUF88 [Shewanella halifaxensis HAW-EB4]
Length = 172
Score = 167 bits (424), Expect = 5e-40, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 13/167 (7%)
Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
+KIALF+D N+Y + + A G +YRKL + + A Y GD Q
Sbjct: 14 YTVKKIALFVDVQNIYYTCRQAYGRQFNYRKLWQHLGYEGNISAATAYAIHRGDDGQL-- 71
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
D L + GF+V K + ++ K DV + +D E + ++ +++ SG
Sbjct: 72 ---KFQDALKHIGFEVKLKPFIQRSDGS----AKGDWDVGITIDIMEAASEVDCVILLSG 124
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
DG F L+ +++K I + V PS+ + L + F ++
Sbjct: 125 DGDFDLLMQKIKQK---YGIETQVYGVPSLTAKSLIDSVEQFHEIDD 168
>gi|27366806|ref|NP_762333.1| hypothetical protein VV2_0365 [Vibrio vulnificus CMCP6]
gi|320158689|ref|YP_004191067.1| hypothetical protein VVM_01748 [Vibrio vulnificus MO6-24/O]
gi|27358373|gb|AAO07323.1| hypothetical protein VV2_0365 [Vibrio vulnificus CMCP6]
gi|319934001|gb|ADV88864.1| hypothetical protein VVMO6_03842 [Vibrio vulnificus MO6-24/O]
Length = 162
Score = 167 bits (423), Expect = 7e-40, Method: Composition-based stats.
Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 15/164 (9%)
Query: 7 KIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
K+A+F+D N+Y + K DY + ++ V+ A+ Y DP Q+ H
Sbjct: 7 KVAIFVDVQNIYYTCKEKYRKHFDYNRFWQSATQGKQVVVAHAYAISSKDPGQR--QFHH 64
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
+L + GF V K + + K DV LA+DAFE + ++ +++ SGDG F
Sbjct: 65 ILRGI---GFDVKLKPFIQRWDGS----AKGDWDVGLALDAFEHAPMVDEVILLSGDGDF 117
Query: 126 TTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
LV +Q+K KKVT+ P + + L+ D ++ +
Sbjct: 118 EILVERIQQKFGKKVTV----YGVPGLTAQNLQAVVDKYIPIED 157
>gi|289582398|ref|YP_003480864.1| hypothetical protein Nmag_2746 [Natrialba magadii ATCC 43099]
gi|289531951|gb|ADD06302.1| protein of unknown function DUF88 [Natrialba magadii ATCC 43099]
Length = 165
Score = 166 bits (422), Expect = 8e-40, Method: Composition-based stats.
Identities = 45/170 (26%), Positives = 81/170 (47%), Gaps = 14/170 (8%)
Query: 3 DPREKIALFIDGANLYASSKALG-FDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
P +++A+ +D NLY S+++L +IDY LL + RA Y PE++
Sbjct: 5 HPGQRVAVLVDAQNLYHSAQSLHSRNIDYSALLSKAVQDRQLTRAIAYVIRADAPEEE-- 62
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
D L GF+ K K F++ K+ DV +++DA + ++ +V+ +G
Sbjct: 63 ---SFFDALVDIGFETKIKDIKTFSDG----TKKADWDVGMSLDAVTLANHVDTVVLCTG 115
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
DG F+ L + L+ + +V +++ S +D+L D F+DL
Sbjct: 116 DGDFSRLCSHLRHEGVRVEVMAF----ESSTADELIDATDTFLDLDERPE 161
>gi|300866267|ref|ZP_07110978.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
gi|300335738|emb|CBN56138.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
Length = 157
Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats.
Identities = 45/163 (27%), Positives = 85/163 (52%), Gaps = 13/163 (7%)
Query: 17 LYASSKALGFDIDYRKLLKAF---RSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYN 73
++ + + G+ D R++L+ F + ++I A++YT + +Q D L
Sbjct: 1 MFYAQQKNGWFFDPRRVLEYFKNAQQNVMLINAFWYTGLKDPQDQ-----RGFRDALISL 55
Query: 74 GFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAAL 132
G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +V+FSGDG F + L
Sbjct: 56 GYTVRTKILKEYYDDASGRYSQKANLDIEIVVDMFNTVDQYDQVVLFSGDGDFERAIELL 115
Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
+ K +T+VST M + +LR D ++DL ++ I +
Sbjct: 116 RSKNTHITVVST----EGMIARELRNATDRYIDLNEIREHIEK 154
>gi|284164086|ref|YP_003402365.1| hypothetical protein Htur_0796 [Haloterrigena turkmenica DSM 5511]
gi|284013741|gb|ADB59692.1| protein of unknown function DUF88 [Haloterrigena turkmenica DSM
5511]
Length = 165
Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 14/170 (8%)
Query: 3 DPREKIALFIDGANLYASSKALG-FDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
P +++A+ +D NLY ++++L +IDY LL + RA Y PE++
Sbjct: 5 HPGQRVAVLVDAQNLYHTAQSLHSRNIDYSALLDKAVQDRQLTRAIAYVIRADSPEEE-- 62
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
+ L GF+ K K F++ K+ DV +++DA + ++ +V+ +G
Sbjct: 63 ---SFFEALIDIGFEPKIKDIKTFSDG----TKKADWDVGMSLDAVTLANHVDTVVLCTG 115
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
DG F+ L + L+ + +V +++ S +++L AD F+DL
Sbjct: 116 DGDFSRLCSHLRHEGVRVEVMAF----ESSTAEELIAAADSFVDLGERHE 161
>gi|313127027|ref|YP_004037297.1| hypothetical protein Hbor_22910 [Halogeometricum borinquense DSM
11551]
gi|312293392|gb|ADQ67852.1| uncharacterized conserved protein [Halogeometricum borinquense DSM
11551]
Length = 165
Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats.
Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 14/170 (8%)
Query: 3 DPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
P +++A+ D NLY S+++ +IDY LL+ S + RA Y PE++
Sbjct: 5 HPGQRVAILADAQNLYHSAQSLYSRNIDYSSLLEKGVSDRTLTRAIAYVVRADSPEEE-- 62
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
D L GF+ K K F G K+ DV +++DA + ++ +V+ +G
Sbjct: 63 ---SFFDALVEIGFETKIKDIKTF----GDGSKKADWDVGMSLDAVTLANHVDTVVLCTG 115
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
DG F+ L + L+ + +V +++ +D+L AD F+D++ +
Sbjct: 116 DGDFSRLCSHLRHEGVRVEVIAF----KESTADELIEAADTFLDMSDRQE 161
>gi|194335638|ref|YP_002017432.1| protein of unknown function DUF88 [Pelodictyon phaeoclathratiforme
BU-1]
gi|194308115|gb|ACF42815.1| protein of unknown function DUF88 [Pelodictyon phaeoclathratiforme
BU-1]
Length = 287
Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats.
Identities = 51/173 (29%), Positives = 89/173 (51%), Gaps = 9/173 (5%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
+ A+FIDGANL+ + + LG+ ID+ +L+ F S + A YY ++ +
Sbjct: 8 MGRAAVFIDGANLFYTQRHLGWQIDFSRLMAFFISGYATVEANYYVPASEPVSEENAA-- 65
Query: 65 PLLDWLHYNGFQVVAKVAKE-FTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L +G+ + +K K+ + G +K ++DVEL VDA +++ + ++FSGD
Sbjct: 66 -FTRVLMAHGYHITSKPVKKIVNKETGVIVMKGNLDVELVVDALSRADQYDTFILFSGDS 124
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLR-RQADYFMDLAYLKNEIAR 175
F L+ AL+ K K+V + ST +++ +L + DLA LK I +
Sbjct: 125 DFIPLLRALKEKGKEVLVYST----QGLSARELLAEPGIAYHDLALLKERIEQ 173
>gi|325283309|ref|YP_004255850.1| hypothetical protein Deipr_1081 [Deinococcus proteolyticus MRP]
gi|324315118|gb|ADY26233.1| Domain of unknown function DUF88 [Deinococcus proteolyticus MRP]
Length = 186
Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats.
Identities = 45/168 (26%), Positives = 78/168 (46%), Gaps = 10/168 (5%)
Query: 4 PREKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
P+ ++ +FID NLY S++ L +++ LL A ++ A YT + S
Sbjct: 6 PKPRVGIFIDTQNLYHSARDLLERTVNFETLLHAGADGRELVHAIAYTVERENE----ST 61
Query: 63 LHPLLDWLHYNGFQVV-AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
P + L G++V + FT + GR + + D+ + D + L+ +V+ SG
Sbjct: 62 ARPFIYKLSTLGYKVRRMNLTLHFTSDSGRPIYEGNWDMGMVADMVRLMDHLDIVVLGSG 121
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
DG FT +V LQ + K+V +++ + +L AD F L L
Sbjct: 122 DGDFTDIVEVLQERGKRVEVLAF----REHTAQKLIDAADKFTHLPDL 165
>gi|153214272|ref|ZP_01949289.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|229515202|ref|ZP_04404662.1| hypothetical protein VCB_002859 [Vibrio cholerae TMA 21]
gi|297579334|ref|ZP_06941262.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|124115420|gb|EAY34240.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|229347907|gb|EEO12866.1| hypothetical protein VCB_002859 [Vibrio cholerae TMA 21]
gi|297536928|gb|EFH75761.1| conserved hypothetical protein [Vibrio cholerae RC385]
Length = 157
Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats.
Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 15/166 (9%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
EKIA+ +D N+Y + + G DY + V++A Y DP+Q+
Sbjct: 1 MEKIAILVDVQNVYYTCREQYGRHFDYNQFWSQVTQNRTVVKANAYAIASKDPQQR--QF 58
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
H +L + GF+V+ K + ++ K DV +A+D +E ++ ++ +V+ SGDG
Sbjct: 59 HHILRGI---GFEVMLKPFIQRSDGS----AKGDWDVGIALDGYELAQEVDTVVLVSGDG 111
Query: 124 CFTTLVAAL-QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
F LV + QR KV + P + + L A F + +
Sbjct: 112 DFEPLVTRIAQRFQVKVEV----YGVPKLTAQHLIDVASQFHPIEH 153
>gi|114766684|ref|ZP_01445623.1| hypothetical protein 1100011001297_R2601_11634 [Pelagibaca
bermudensis HTCC2601]
gi|114541074|gb|EAU44129.1| hypothetical protein R2601_11634 [Roseovarius sp. HTCC2601]
Length = 117
Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats.
Identities = 52/104 (50%), Positives = 76/104 (73%)
Query: 77 VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKV 136
+V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FSGDG F LV +LQR+
Sbjct: 1 MVTKPAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHIVLFSGDGDFRPLVESLQRQG 60
Query: 137 KKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
+V++VST+ S P M +D+LRRQAD F++L L+ I R P E
Sbjct: 61 VRVSVVSTIRSQPPMIADELRRQADNFIELDELREVIGRPPREQ 104
>gi|163751027|ref|ZP_02158258.1| hypothetical protein KT99_04722 [Shewanella benthica KT99]
gi|161329188|gb|EDQ00187.1| hypothetical protein KT99_04722 [Shewanella benthica KT99]
Length = 159
Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats.
Identities = 40/165 (24%), Positives = 76/165 (46%), Gaps = 13/165 (7%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+KIA+F+D N+Y + + A G +YRKL + + ++ A Y GD Q
Sbjct: 3 NKKIAIFVDVQNIYYTCRQAYGRQFNYRKLWQHIGHKGDIVSATAYAIHKGDEGQL---- 58
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
D L + GF + K + ++ K DV +A+D E + ++ +++ SGDG
Sbjct: 59 -KFQDALKHIGFDIKLKPFIQRSDGS----AKGDWDVGIAIDVMEAAAEVDTIILLSGDG 113
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
F L+ + +K + + V P++ + L + F+++
Sbjct: 114 DFDLLMLKI---YQKYGVDTQVYGVPALTAKSLIDASCKFIEIDE 155
>gi|153800465|ref|ZP_01955051.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
gi|124124091|gb|EAY42834.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
Length = 157
Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats.
Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 15/166 (9%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
EKIA+ +D N+Y + + G DY + V++A Y DP+Q+
Sbjct: 1 MEKIAILVDVQNVYYTCREQYGRHFDYNQFWSQVTQNRTVVKANAYAIASKDPQQR--QF 58
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
H +L + GF+V+ K + ++ K DV +A+D +E ++ ++ +V+ SGDG
Sbjct: 59 HHILRGI---GFEVMLKPFIQRSDGS----AKGDWDVGIALDGYELAQEVDTVVLVSGDG 111
Query: 124 CFTTLVAAL-QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
F LV + QR KV + P + + L A F + +
Sbjct: 112 DFEPLVTRIAQRFQVKVEV----YGVPKLTAQHLIDVASQFHPIEH 153
>gi|110667467|ref|YP_657278.1| hypothetical protein HQ1506A [Haloquadratum walsbyi DSM 16790]
gi|109625214|emb|CAJ51634.1| conserved hypothetical protein [Haloquadratum walsbyi DSM 16790]
Length = 165
Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats.
Identities = 46/170 (27%), Positives = 81/170 (47%), Gaps = 14/170 (8%)
Query: 3 DPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
P +++A+ D NLY ++++ IDY LLK S + RA Y PE++
Sbjct: 5 HPGQRVAVLADAQNLYHTAQSLYSQKIDYGSLLKKGVSGRELTRAIAYVIQADAPEEET- 63
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
+ L GF+ K K F G K+ DV +++DA + ++ +V+ +G
Sbjct: 64 ----FFEALVDIGFEPKIKQIKTF----GDGTKKADWDVGMSLDAVTLANHVDTVVLCTG 115
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
DG F+ L + L+ + +V ++S +D+L AD F+DL+ +
Sbjct: 116 DGDFSRLCSHLRHEGVRVEVMSF----RESTADELVDAADTFIDLSARQE 161
>gi|157960982|ref|YP_001501016.1| hypothetical protein Spea_1154 [Shewanella pealeana ATCC 700345]
gi|157845982|gb|ABV86481.1| protein of unknown function DUF88 [Shewanella pealeana ATCC 700345]
Length = 157
Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats.
Identities = 43/164 (26%), Positives = 75/164 (45%), Gaps = 13/164 (7%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
++IALF+D N+Y + + A G +YRKL + V +A Y GD Q
Sbjct: 1 MKRIALFVDVQNIYYTCRQAYGKQFNYRKLWQHLGYEGDVSQATAYAIHRGDDGQL---- 56
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
D L + GF+V K + ++ K DV + +D E + ++ +++ SGDG
Sbjct: 57 -KFQDALKHIGFEVKLKPFIQRSDGS----AKGDWDVGITIDIMEAASEVDCVILLSGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
F L +QR +K + + V P++ + L + F ++
Sbjct: 112 DFDLL---MQRIHQKYGVETQVYGVPTLTAKSLIDSVNQFHEID 152
>gi|37676581|ref|NP_936977.1| hypothetical protein VVA0921 [Vibrio vulnificus YJ016]
gi|37201124|dbj|BAC96947.1| uncharacterized conserved protein [Vibrio vulnificus YJ016]
Length = 162
Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats.
Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 15/164 (9%)
Query: 7 KIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
K+A+F+D N+Y + K DY + ++ V+ A+ Y DP Q+ H
Sbjct: 7 KVAIFVDVQNIYYTCKEKYRKHFDYNRFWQSATQDKQVVVAHAYAISSKDPGQR--QFHH 64
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
+L + GF V K + + K DV LA+DAFE + ++ +++ SGDG F
Sbjct: 65 ILRGI---GFDVKLKPFIQRWDGS----AKGDWDVGLALDAFEHAPMVDEVILLSGDGDF 117
Query: 126 TTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
LV +Q+K KKVT+ P + + L+ D ++ +
Sbjct: 118 EILVERIQQKFGKKVTV----YGVPGLTAQNLQAVVDKYIPIED 157
>gi|119493449|ref|ZP_01624118.1| hypothetical protein L8106_08531 [Lyngbya sp. PCC 8106]
gi|119452693|gb|EAW33872.1| hypothetical protein L8106_08531 [Lyngbya sp. PCC 8106]
Length = 157
Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats.
Identities = 46/163 (28%), Positives = 87/163 (53%), Gaps = 13/163 (7%)
Query: 17 LYASSKALGFDIDYRKLLKAF---RSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYN 73
++ + + G+ D R++L F +S I++ A++YT + +Q D L
Sbjct: 1 MFYAQQKNGWFFDPRRVLTYFKHEQSDVILVNAFWYTGLKDPQDQ-----RGFRDALISL 55
Query: 74 GFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAAL 132
G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +V+FSGDG F + L
Sbjct: 56 GYTVRTKILKEYYDDSSGRYSQKANLDIEIVVDMFNTVDQYDRVVLFSGDGDFERAIELL 115
Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
+ K +T+VST M + +LR D ++DL ++++I +
Sbjct: 116 RSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDQIEK 154
>gi|294139934|ref|YP_003555912.1| hypothetical protein SVI_1163 [Shewanella violacea DSS12]
gi|293326403|dbj|BAJ01134.1| conserved hypothetical protein [Shewanella violacea DSS12]
Length = 159
Score = 164 bits (417), Expect = 3e-39, Method: Composition-based stats.
Identities = 40/165 (24%), Positives = 75/165 (45%), Gaps = 13/165 (7%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+KIA+F+D N+Y + + A G +YRKL + ++ A Y GD Q
Sbjct: 3 NKKIAIFVDVQNIYYTCRQAYGRQFNYRKLWQHIIHEGDIVSATAYAIHKGDDGQL---- 58
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
D L + GF + K + ++ K DV +A+D E + ++ +++ SGDG
Sbjct: 59 -KFQDALKHIGFDIKLKPFIQRSDGS----AKGDWDVGIAIDVMEAATEVDTIILLSGDG 113
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
F L+ + +K + + V P++ + L + F+++
Sbjct: 114 DFDLLMLKV---YQKYGVDTQVYGVPALTAKSLIDASCKFIEIDE 155
>gi|15641813|ref|NP_231445.1| hypothetical protein VC1811 [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121585837|ref|ZP_01675631.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|121727642|ref|ZP_01680745.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|147673789|ref|YP_001217351.1| hypothetical protein VC0395_A1407 [Vibrio cholerae O395]
gi|153817839|ref|ZP_01970506.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|153821111|ref|ZP_01973778.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|153828564|ref|ZP_01981231.1| conserved hypothetical protein [Vibrio cholerae 623-39]
gi|227081940|ref|YP_002810491.1| hypothetical protein VCM66_1734 [Vibrio cholerae M66-2]
gi|229508089|ref|ZP_04397594.1| hypothetical protein VCF_003323 [Vibrio cholerae BX 330286]
gi|229511672|ref|ZP_04401151.1| hypothetical protein VCE_003081 [Vibrio cholerae B33]
gi|229518811|ref|ZP_04408254.1| hypothetical protein VCC_002836 [Vibrio cholerae RC9]
gi|229520283|ref|ZP_04409709.1| hypothetical protein VIF_000801 [Vibrio cholerae TM 11079-80]
gi|229607650|ref|YP_002878298.1| hypothetical protein VCD_002562 [Vibrio cholerae MJ-1236]
gi|254285238|ref|ZP_04960203.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|254848901|ref|ZP_05238251.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|255745423|ref|ZP_05419372.1| hypothetical protein VCH_001771 [Vibrio cholera CIRS 101]
gi|262147203|ref|ZP_06028007.1| hypothetical protein VIG_000056 [Vibrio cholerae INDRE 91/1]
gi|262169804|ref|ZP_06037495.1| hypothetical protein VIJ_003057 [Vibrio cholerae RC27]
gi|9656336|gb|AAF94959.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121549975|gb|EAX59993.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|121630029|gb|EAX62436.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|126511659|gb|EAZ74253.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|126521307|gb|EAZ78530.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|146315672|gb|ABQ20211.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|148875959|gb|EDL74094.1| conserved hypothetical protein [Vibrio cholerae 623-39]
gi|150424510|gb|EDN16446.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|227009828|gb|ACP06040.1| conserved hypothetical protein [Vibrio cholerae M66-2]
gi|227013710|gb|ACP09920.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|229342649|gb|EEO07641.1| hypothetical protein VIF_000801 [Vibrio cholerae TM 11079-80]
gi|229343500|gb|EEO08475.1| hypothetical protein VCC_002836 [Vibrio cholerae RC9]
gi|229351637|gb|EEO16578.1| hypothetical protein VCE_003081 [Vibrio cholerae B33]
gi|229355594|gb|EEO20515.1| hypothetical protein VCF_003323 [Vibrio cholerae BX 330286]
gi|229370305|gb|ACQ60728.1| hypothetical protein VCD_002562 [Vibrio cholerae MJ-1236]
gi|254844606|gb|EET23020.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|255737253|gb|EET92649.1| hypothetical protein VCH_001771 [Vibrio cholera CIRS 101]
gi|262022038|gb|EEY40748.1| hypothetical protein VIJ_003057 [Vibrio cholerae RC27]
gi|262031360|gb|EEY49970.1| hypothetical protein VIG_000056 [Vibrio cholerae INDRE 91/1]
gi|327484370|gb|AEA78777.1| hypothetical protein VCLMA_A1565 [Vibrio cholerae LMA3894-4]
Length = 157
Score = 164 bits (417), Expect = 4e-39, Method: Composition-based stats.
Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 15/166 (9%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
EKIA+ +D N+Y + + G DY + V++A Y DP+Q+
Sbjct: 1 MEKIAILVDVQNVYYTCREQYGRHFDYNQFWSQVTQNRTVVKANAYAIASKDPQQR--QF 58
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
H +L + GF+V+ K + ++ K DV +A+D +E ++ ++ +V+ SGDG
Sbjct: 59 HHILRGI---GFEVMLKPFIQRSDGS----AKGDWDVGIALDGYELAQEVDTVVLVSGDG 111
Query: 124 CFTTLVAAL-QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
F LV + QR KV + P + + L A F + +
Sbjct: 112 DFEPLVTRIAQRFQVKVEV----YGVPKLTAQHLIDVASQFHPIEH 153
>gi|212634169|ref|YP_002310694.1| hypothetical protein swp_1319 [Shewanella piezotolerans WP3]
gi|212555653|gb|ACJ28107.1| Conserved hypothetical protein [Shewanella piezotolerans WP3]
Length = 157
Score = 164 bits (417), Expect = 4e-39, Method: Composition-based stats.
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 13/165 (7%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+KIALF+D N+Y + + A G +YRKL + + A Y GD Q
Sbjct: 1 MKKIALFVDVQNIYYTCRQAYGRQFNYRKLWQHLGYEGEITSATAYAIHRGDDGQL---- 56
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
D L + GF V K + ++ K DV + +D E + ++ +++ SGDG
Sbjct: 57 -KFQDALKHIGFDVKLKPFIQRSDGS----AKGDWDVGITIDIMEAASEVDCVILLSGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
F L+ + +K + + V P + + L A + ++
Sbjct: 112 DFDLLMLKI---YQKYGVETQVYGVPGLTAKSLIDSASQYHEIDD 153
>gi|109898030|ref|YP_661285.1| hypothetical protein Patl_1710 [Pseudoalteromonas atlantica T6c]
gi|109700311|gb|ABG40231.1| protein of unknown function DUF88 [Pseudoalteromonas atlantica T6c]
Length = 158
Score = 164 bits (417), Expect = 4e-39, Method: Composition-based stats.
Identities = 37/162 (22%), Positives = 76/162 (46%), Gaps = 13/162 (8%)
Query: 7 KIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
+IA+F+D N+Y +++ +YR+ + + ++ A Y T D +Q
Sbjct: 4 RIAVFVDVQNIYYTTRDTYQKQFNYRQFWQHLSEQGDIVIANAYATERHDSQQ-----QK 58
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
L + GF V K + ++ K DV + +D + ++ ++ +V+ SGDG F
Sbjct: 59 FQSALKHIGFNVKLKPFIQRSDGS----AKGDWDVGITIDVLDAAQQVDTVVLLSGDGDF 114
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
L+ A++ KK + + V P++ ++ L D F+++
Sbjct: 115 DLLLKAVK---KKHEVKTKVYGVPALTANALVSACDEFVEIT 153
>gi|91791739|ref|YP_561390.1| hypothetical protein Sden_0372 [Shewanella denitrificans OS217]
gi|91713741|gb|ABE53667.1| protein of unknown function DUF88 [Shewanella denitrificans OS217]
Length = 184
Score = 164 bits (415), Expect = 6e-39, Method: Composition-based stats.
Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 13/163 (7%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
+KIALF+D N+Y + + A G +YRKL + + +++A Y GD Q
Sbjct: 29 KKIALFVDVQNIYYTCREAYGRQFNYRKLWQLVSQQGEIVQAVAYAIHKGDDGQL----- 83
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
D L + GF+V K + + K DV + +D E + + +++ SGDG
Sbjct: 84 KFQDALKHIGFEVKLKPFIQRADGS----AKGDWDVGITIDVMEAAADVNTVILLSGDGD 139
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
F L+ + +K + + V PS+ + L A F +
Sbjct: 140 FDRLLVKI---YQKHGVDTQVYGVPSLTAKSLMDSAGQFHPID 179
>gi|218295249|ref|ZP_03496085.1| protein of unknown function DUF88 [Thermus aquaticus Y51MC23]
gi|218244452|gb|EED10977.1| protein of unknown function DUF88 [Thermus aquaticus Y51MC23]
Length = 180
Score = 164 bits (415), Expect = 6e-39, Method: Composition-based stats.
Identities = 45/175 (25%), Positives = 87/175 (49%), Gaps = 17/175 (9%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
+IALFIDG+ +Y ++K LG+++D+R+++ F + + A+YY + +++
Sbjct: 2 RIALFIDGSYMYQAAKRLGWNVDHRRVITQFATPEQLYNAFYYVPITDPEDER---QQRF 58
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126
+D L + G+ V +++ + G R ++ M A D + + V+ SG G
Sbjct: 59 IDALVFMGYTVRSRLVR------GEARFEAMM----ATDLLTTAPRWDRAVVASGSGELA 108
Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
AL+ K+V ++ +A +LR QAD F++LA + + R P +
Sbjct: 109 HAFQALRAMGKEVHLL----GVHELADLELRNQADRFLNLAEWREVLERTPGGRR 159
>gi|110834666|ref|YP_693525.1| hypothetical protein ABO_1805 [Alcanivorax borkumensis SK2]
gi|110647777|emb|CAL17253.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
Length = 160
Score = 164 bits (415), Expect = 7e-39, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 72/169 (42%), Gaps = 15/169 (8%)
Query: 1 MFDPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
M+ P +IA+F D N+Y +++ A G +YR L + ++ ++ A Y T GD Q
Sbjct: 1 MYMP--RIAVFADVQNIYYTTRQAFGRPFNYRALWQLLSAQGEIVHALAYATHRGDDGQT 58
Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119
D L + GF V K + ++ K DV +AVD + ++ +V+
Sbjct: 59 -----KFQDALKHIGFTVKLKPYIQRSDGS----SKGDWDVGIAVDVMTLAPEVDTVVLL 109
Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
SGDG F L+ + + + V + + L A F +
Sbjct: 110 SGDGDFDVLLTRV---GANPGVRTEVYGVEPLTARSLIDSASVFHPIGD 155
>gi|229523840|ref|ZP_04413245.1| hypothetical protein VCA_001419 [Vibrio cholerae bv. albensis
VL426]
gi|229337421|gb|EEO02438.1| hypothetical protein VCA_001419 [Vibrio cholerae bv. albensis
VL426]
Length = 157
Score = 163 bits (414), Expect = 7e-39, Method: Composition-based stats.
Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 15/166 (9%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
EKIA+ +D N+Y + + G DY + V++A Y P+Q+
Sbjct: 1 MEKIAILVDVQNVYYTCREQYGRHFDYNQFWSQVTQNRTVVKANAYAIASKAPQQR--QF 58
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
H +L + GF+V+ K + ++ K DV +A+D +E ++ ++ +V+ SGDG
Sbjct: 59 HHILRGI---GFEVMLKPFIQRSDGS----AKGDWDVGIALDGYELAQEVDTVVLVSGDG 111
Query: 124 CFTTLVAAL-QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
F LV + QR KV + P + + L A F + +
Sbjct: 112 DFEPLVTRIAQRFQVKVEV----YGVPKLTAQHLIDVASQFHPIEH 153
>gi|317970442|ref|ZP_07971832.1| hypothetical protein SCB02_12967 [Synechococcus sp. CB0205]
Length = 168
Score = 163 bits (414), Expect = 7e-39, Method: Composition-based stats.
Identities = 47/172 (27%), Positives = 87/172 (50%), Gaps = 12/172 (6%)
Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFR--SRAIVIRAYYYTTVVGDPEQQFSPLHP 65
+AL +DG +++ + LG+ D R+LL+ S + A++YT + +Q P
Sbjct: 3 LALAVDGHSMFYVQQKLGWFFDPRRLLEYATAQSGVELGSAFWYTGLKDATDQ-----RP 57
Query: 66 LLDWLHYNGFQVVAKVAKEFT-ENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
D L GF V K +E ++ R+ ++++DVE+A+D + ++ + + SG
Sbjct: 58 FRDALTSLGFTVRTKPLREVGHDSDQRQFARANLDVEIAIDLMAVAHRIDEVWVMSGSRD 117
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
L+ L+ + KV ++ST M +LR AD F+DL+ LK ++ +
Sbjct: 118 LERLLEVLRIRGLKVVLMST----EGMVPRELRNAADRFVDLSSLKPQLEKT 165
>gi|261211879|ref|ZP_05926166.1| hypothetical protein VCJ_002142 [Vibrio sp. RC341]
gi|260839229|gb|EEX65861.1| hypothetical protein VCJ_002142 [Vibrio sp. RC341]
Length = 157
Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats.
Identities = 44/166 (26%), Positives = 75/166 (45%), Gaps = 15/166 (9%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
EKIA+ +D N+Y + + G DY + V++A Y DP+Q+
Sbjct: 1 MEKIAILVDVQNVYYTCRERYGRHFDYNQFWSQATQGRAVVKANAYAIASKDPQQR--QF 58
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
H +L + GF+V+ K + ++ K DV +A+D +E ++ + +V+ SGDG
Sbjct: 59 HHILRGI---GFEVMLKPFIQRSDGS----AKGDWDVGIALDGYELAQEVNTVVLVSGDG 111
Query: 124 CFTTLVAAL-QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
F LV + QR KV + P + + L A F + +
Sbjct: 112 DFEPLVTRIAQRFQVKVEV----YGVPKLTAQHLIDVASQFHPIEH 153
>gi|318040287|ref|ZP_07972243.1| hypothetical protein SCB01_01212 [Synechococcus sp. CB0101]
Length = 175
Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats.
Identities = 50/176 (28%), Positives = 85/176 (48%), Gaps = 12/176 (6%)
Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRS--RAIVIRAYYYTTVVGDPEQQFSPLHP 65
+AL +DG +++ + LG+ D R+LL + + A++YT + +Q P
Sbjct: 3 LALAVDGHSMFYVQQKLGWFFDPRRLLAYATATPGVEISSAFWYTGLKDPTDQ-----RP 57
Query: 66 LLDWLHYNGFQVVAKVAKEFT-ENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
D L GF V K +E E R+ ++++DVE+A+D + + + + SG
Sbjct: 58 FRDALTSLGFTVRTKPLREVGGEADQRQFARANLDVEVAIDLLAVAHRTDEVWLLSGSRD 117
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
LV L+ K KV +VST M +LR AD F+DLA L+ ++ + +
Sbjct: 118 LERLVEVLRIKGLKVVLVST----DGMVPRELRNAADRFLDLAELRPQLEKTEHQQ 169
>gi|229529164|ref|ZP_04418554.1| hypothetical protein VCG_002257 [Vibrio cholerae 12129(1)]
gi|229332938|gb|EEN98424.1| hypothetical protein VCG_002257 [Vibrio cholerae 12129(1)]
Length = 157
Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats.
Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 15/166 (9%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
EKIA+ +D N+Y + + G DY + V++A Y P+Q+
Sbjct: 1 MEKIAILVDVQNVYYTCREQYGRHFDYNQFWSQVTQNRTVVKANAYAIASKAPQQR--QF 58
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
H +L + GF+V+ K + ++ K DV +A+D +E ++ ++ +V+ SGDG
Sbjct: 59 HHILRGI---GFEVMLKPFIQRSDGS----AKGDWDVGIALDGYELAQEVDTVVLVSGDG 111
Query: 124 CFTTLVAAL-QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
F LV + QR KV + P + + L A F + +
Sbjct: 112 DFEPLVTRIAQRFQVKVEV----YGVPKLTAQHLIDVASQFHPIEH 153
>gi|225851407|ref|YP_002731641.1| hypothetical protein PERMA_1879 [Persephonella marina EX-H1]
gi|225645689|gb|ACO03875.1| conserved hypothetical protein [Persephonella marina EX-H1]
Length = 224
Score = 162 bits (412), Expect = 1e-38, Method: Composition-based stats.
Identities = 48/191 (25%), Positives = 85/191 (44%), Gaps = 24/191 (12%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTT-----VVGDPE 57
P EK+A+FIDG N++ + + I+Y+KL+ R ++RAY+YT + D
Sbjct: 18 YPNEKVAIFIDGGNMFHACNYMQIKINYKKLIDILRKDRWLLRAYFYTGIPSGDLPRDVR 77
Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEH 115
+Q L+ L G +V K+ E ++ +D+ LA D + +
Sbjct: 78 EQLRKQQGFLNELQNLGIKVKTMPLKKTPEG----YIEKGIDILLATDMVSLAFRNAYDT 133
Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK----- 170
++ SGD + +V +Q K+V S + +S +LR+ D F+ L +K
Sbjct: 134 AILVSGDSDYVPVVKEIQELGKRVENASFKRT----SSYELRKVCDEFILLDNIKHRFTT 189
Query: 171 ----NEIARDP 177
+I + P
Sbjct: 190 PLYPEKIEKPP 200
>gi|153826226|ref|ZP_01978893.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|149739991|gb|EDM54166.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
Length = 157
Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 15/166 (9%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
EKIA+ +D N+Y + + G +Y + V++A Y DP+Q+
Sbjct: 1 MEKIAILVDVQNVYYTCREQYGRHFEYNQFWSQVTQNRTVVKANAYAIASKDPQQR--QF 58
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
H +L + GF+V+ K + ++ K DV +A+D +E ++ ++ +V+ SGDG
Sbjct: 59 HHILRGI---GFEVMLKPFIQRSDGS----AKGDWDVGIALDGYELAQEVDTVVLVSGDG 111
Query: 124 CFTTLVAAL-QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
F LV + QR KV + P + + L A F + +
Sbjct: 112 DFEPLVTRIAQRFQVKVEV----YGVPKLTAQHLIDVASQFHPIEH 153
>gi|24374996|ref|NP_719039.1| hypothetical protein SO_3490 [Shewanella oneidensis MR-1]
gi|24349728|gb|AAN56483.1|AE015785_6 conserved hypothetical protein [Shewanella oneidensis MR-1]
Length = 157
Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 38/166 (22%), Positives = 72/166 (43%), Gaps = 13/166 (7%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
KIALF+D N+Y + + A +YRKL + ++ ++ A Y GD Q
Sbjct: 1 MNKIALFVDVQNIYYTCREAYQRQFNYRKLWQHLSTQGEIVSAVAYAIHRGDDGQL---- 56
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
D L + GF++ K + ++ K DV + +D + + ++ +++ SGDG
Sbjct: 57 -KFQDALRHIGFELKLKPFIQRSDGS----AKGDWDVGITIDVLDAAPNVDTVILLSGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
F L+ + +K + + V P + + L F + +
Sbjct: 112 DFAILLEKITQK---YGVKAEVYGVPQLTAKALMDATTQFNPIDDV 154
>gi|119946864|ref|YP_944544.1| hypothetical protein Ping_3258 [Psychromonas ingrahamii 37]
gi|119865468|gb|ABM04945.1| hypothetical protein DUF88 [Psychromonas ingrahamii 37]
Length = 157
Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 41/165 (24%), Positives = 70/165 (42%), Gaps = 15/165 (9%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
KIA+F D N+Y +++ A G +YRKL + + ++ AY Y GD +Q
Sbjct: 1 MNKIAVFADVQNIYYTTRQAYGKQFNYRKLWQQLEQQGDIVSAYAYAIERGDNQQ----- 55
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
D L + GF+V K + ++ K DV + +D E + ++ +++ SGDG
Sbjct: 56 KKFQDVLTHLGFEVKLKPFIQRSDGT----AKGDWDVGITIDIMETAPQVDTIILLSGDG 111
Query: 124 CFTTLVAAL-QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
F L + Q K P + + L + F +
Sbjct: 112 DFAILFDKVKQAYGVKTE----AYGVPKLTAKALIDASTVFHPIE 152
>gi|157374400|ref|YP_001473000.1| hypothetical protein Ssed_1261 [Shewanella sediminis HAW-EB3]
gi|157316774|gb|ABV35872.1| protein of unknown function DUF88 [Shewanella sediminis HAW-EB3]
Length = 159
Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats.
Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 13/164 (7%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
+KIA+F+D N+Y + + A G +YRKL + + A Y GD Q
Sbjct: 4 KKIAIFVDVQNIYYTCRQAYGRQFNYRKLWQHINHEGEISSATAYAIHRGDDGQL----- 58
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
D L + GF V K + ++ K DV + +D E + ++ +++ SGDG
Sbjct: 59 KFQDALKHIGFDVKLKPFIQRSDGS----AKGDWDVGITIDIMEAASEVDSIILLSGDGD 114
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
F L+ + +K I + V P++ + L A + ++
Sbjct: 115 FGLLMLKIHQK---YGIDTQVYGVPTLTAKSLIDSACQYHEIDD 155
>gi|322369896|ref|ZP_08044458.1| hypothetical protein ZOD2009_10415 [Haladaptatus paucihalophilus
DX253]
gi|320550232|gb|EFW91884.1| hypothetical protein ZOD2009_10415 [Haladaptatus paucihalophilus
DX253]
Length = 165
Score = 161 bits (409), Expect = 3e-38, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 73/170 (42%), Gaps = 14/170 (8%)
Query: 3 DPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
P +++ + D NLY ++++ +IDY LL + RA Y P++
Sbjct: 5 HPGQRVTVLADAQNLYHTAQSVYSRNIDYSSLLSKAAQDRELTRAIAYVIQADSPDED-- 62
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
D L GF+ K K F G K+ DV + +DA + ++ +V+ +G
Sbjct: 63 ---RFFDALTDIGFEAKIKAIKTF----GDGSKKADWDVGICLDAITLAPKVDTVVLCTG 115
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
DG F L L+ + +V ++ +++L AD F+DL+
Sbjct: 116 DGDFAQLATHLRHEGVRVEVMGF----QESTAEELIAAADSFIDLSERTE 161
>gi|221633438|ref|YP_002522663.1| hypothetical protein trd_1460 [Thermomicrobium roseum DSM 5159]
gi|221157206|gb|ACM06333.1| Protein of unknown function superfamily [Thermomicrobium roseum DSM
5159]
Length = 198
Score = 161 bits (409), Expect = 3e-38, Method: Composition-based stats.
Identities = 52/162 (32%), Positives = 90/162 (55%), Gaps = 12/162 (7%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
+++A+F D +NLY ++ LG IDY +LL+ + ++ AY Y T+ G+ S P
Sbjct: 8 DRVAVFFDMSNLYFVARDLGVRIDYARLLEFLVAGRRLVCAYAYVTLAGEE----SSAVP 63
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
L WL NGF+VV + + ++ ++ +D+E+AVD Q+ ++ +V+ +GDG +
Sbjct: 64 FLTWLRRNGFRVVTRTLRRGSDGA----LRGDLDLEMAVDVLLQTPHVDVIVLVTGDGEY 119
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
LV +QR ++V I S P + +L ADY++DL
Sbjct: 120 CYLVETVQRLGRRVEIAS----APRNTAVELMELADYYVDLE 157
>gi|225848799|ref|YP_002728963.1| RtsE [Sulfurihydrogenibium azorense Az-Fu1]
gi|225644319|gb|ACN99369.1| RtsE [Sulfurihydrogenibium azorense Az-Fu1]
Length = 174
Score = 161 bits (408), Expect = 4e-38, Method: Composition-based stats.
Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 14/176 (7%)
Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
+++A+F+D NLY S++ +++ +L+ I++RA+ Y + +Q
Sbjct: 6 YNNQRVAVFVDIQNLYYSARDTFNRKVNFESILQKTVGDRILVRAFAYIVKLHGVDQ--- 62
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFT----ENCGRKRVKSSMDVELAVDAFEQSEGLEHLV 117
++ L + G+QV K K F E +K+ D+ +A+DA ++ ++ V
Sbjct: 63 --KGFINTLKHIGYQVREKEPKIFKRLDEEGNLWTTIKADWDMGIAIDAISLADKIDVAV 120
Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
+ +GDG F LV LQ K KV I + + +L AD F+DL +I
Sbjct: 121 LTTGDGDFKDLVKYLQTKGVKVEIAAF----KQTTAKELIEAADEFIDLNIYGEDI 172
>gi|254424011|ref|ZP_05037729.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
gi|196191500|gb|EDX86464.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
Length = 157
Score = 161 bits (407), Expect = 5e-38, Method: Composition-based stats.
Identities = 43/163 (26%), Positives = 83/163 (50%), Gaps = 13/163 (7%)
Query: 17 LYASSKALGFDIDYRKLLKAFRS---RAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYN 73
++ + + G+ D +++L+ F ++ A++YT + +Q D L
Sbjct: 1 MFYAQQKNGWFFDPKRVLEYFLKEIEGNVLGNAFWYTGLKDPQDQ-----RAFRDALISL 55
Query: 74 GFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAAL 132
G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +V+FSGDG F + L
Sbjct: 56 GYTVRTKILKEYYDDASGRYSQKANLDIEIVVDMFNTVDQYDRVVLFSGDGDFERAIELL 115
Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
+ K +T+VST M + +LR D ++DL ++ I +
Sbjct: 116 RSKSTHITVVST----EGMIARELRNVTDRYIDLNSIRRRIEK 154
>gi|153832763|ref|ZP_01985430.1| protein of unknown function [Vibrio harveyi HY01]
gi|156976905|ref|YP_001447811.1| hypothetical protein VIBHAR_05689 [Vibrio harveyi ATCC BAA-1116]
gi|148870897|gb|EDL69787.1| protein of unknown function [Vibrio harveyi HY01]
gi|156528499|gb|ABU73584.1| hypothetical protein VIBHAR_05689 [Vibrio harveyi ATCC BAA-1116]
Length = 162
Score = 161 bits (407), Expect = 5e-38, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 13/167 (7%)
Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
+ ++KIA+ +D N+Y + + A + DY + V+ A Y DP+Q
Sbjct: 4 ESKQKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATQGKEVVSARAYAIASNDPKQ--- 60
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
L GF+V+ K + + K DV + +DA E + ++ +++ SG
Sbjct: 61 --RQFHHILRGVGFEVMLKPYIQRRDGS----AKGDWDVGITLDAIEIAPEVDEVILVSG 114
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
DG F+ LV +Q++ K TV P + S L AD F+ +
Sbjct: 115 DGDFSLLVERIQQRFNK---KVTVYGVPKLTSQTLIDCADNFVAVDE 158
>gi|15605762|ref|NP_213139.1| hypothetical protein aq_200 [Aquifex aeolicus VF5]
gi|2982933|gb|AAC06550.1| hypothetical protein aq_200 [Aquifex aeolicus VF5]
Length = 208
Score = 161 bits (407), Expect = 6e-38, Method: Composition-based stats.
Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 17/179 (9%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE------- 57
E++ +FIDG+NL+ + L +DY KL++ R ++RAY+YT V + +
Sbjct: 2 NERLMIFIDGSNLFHGIRYLNIKVDYSKLVEFLREGRYLVRAYFYTAVPQEKDIKKGTPE 61
Query: 58 -QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLE 114
LD L + G +V ++ + ++ +D+ LA D + +
Sbjct: 62 WDSLQRQKRFLDELSFMGIKVKTAHLRKLPSG---EYLEKEVDIMLATDMLSLAYRNAYD 118
Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
V+ SGD F V A+Q K+V + + +S LR+ D F+ L ++I
Sbjct: 119 TAVLVSGDSDFIHTVEAVQSLGKRVENATFKKT----SSYNLRKVCDRFILLDDHLDKI 173
>gi|254432040|ref|ZP_05045743.1| DUF88 [Cyanobium sp. PCC 7001]
gi|197626493|gb|EDY39052.1| DUF88 [Cyanobium sp. PCC 7001]
Length = 219
Score = 161 bits (407), Expect = 6e-38, Method: Composition-based stats.
Identities = 47/204 (23%), Positives = 89/204 (43%), Gaps = 39/204 (19%)
Query: 2 FDPREK-IALFIDGANLYASSKALGFDIDYRKLLKAFRSRA--IVIRAYYYTTVVGDPEQ 58
F PR + + + +DG +++ + + LG+ D R+LL+ S+ + A++Y + +Q
Sbjct: 13 FQPRPRQLVVAVDGHSMFYAQQKLGWFFDPRRLLRHASSQPGLELAGAFWYAGLKDPSDQ 72
Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFT---------------------------ENCGR 91
P D L GF V + +E R
Sbjct: 73 -----RPFRDALTSLGFTVRTRPLRELAPPASNGSTQAADGEHRHPEPPRPTDQRPADQR 127
Query: 92 KRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151
V++++DVE+AVD + + + + SG LV L+ + ++T+++T M
Sbjct: 128 HFVRANLDVEVAVDLMMVAPRTDEVWLLSGSRDLDRLVEVLRAQGVRITLMTT----EGM 183
Query: 152 ASDQLRRQADYFMDLAYLKNEIAR 175
+ +LR AD F+DLA L+ + +
Sbjct: 184 VARELRNAADGFVDLASLRPVLEK 207
>gi|269967719|ref|ZP_06181767.1| hypothetical protein VMC_31970 [Vibrio alginolyticus 40B]
gi|269827625|gb|EEZ81911.1| hypothetical protein VMC_31970 [Vibrio alginolyticus 40B]
Length = 162
Score = 161 bits (407), Expect = 6e-38, Method: Composition-based stats.
Identities = 44/167 (26%), Positives = 74/167 (44%), Gaps = 13/167 (7%)
Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
+ ++KIA+ +D N+Y + + A + DY + V+ A Y DP+Q
Sbjct: 4 ESKQKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATQGKEVVSARAYAIASNDPKQ--- 60
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
L GF+V+ K + + K DV + +DA E + +E +++ SG
Sbjct: 61 --RQFHHILRGVGFEVMLKPYIQRRDGS----SKGDWDVGITLDAIEIAPEVEEVILVSG 114
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
DG F+ LV +Q++ K TV P + S L AD F+ +
Sbjct: 115 DGDFSLLVERIQQRFNKTV---TVYGVPKLTSQTLIDCADNFVAIDD 158
>gi|149911940|ref|ZP_01900538.1| hypothetical protein PE36_11027 [Moritella sp. PE36]
gi|149804987|gb|EDM65016.1| hypothetical protein PE36_11027 [Moritella sp. PE36]
Length = 157
Score = 160 bits (406), Expect = 6e-38, Method: Composition-based stats.
Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 13/160 (8%)
Query: 5 REKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+KIA+F+D N+Y +++ G +YRKL + + V+ AY Y GD +Q
Sbjct: 1 MQKIAVFVDVQNIYYTTRQTYGRQFNYRKLWQHLLLQGDVVTAYAYAIDKGDDQQ----- 55
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
D L + GF V K + ++ K DV + +D + +E ++ +V+ SGDG
Sbjct: 56 RKFQDALKHIGFDVKLKPFIQRSDGS----AKGDWDVGITIDVLQVAESVDTVVLLSGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163
F L+ ++ + + + V P++ ++ L A F
Sbjct: 112 DFAILLDTIKA---RHQVRAEVYGVPALTANALINSATVF 148
>gi|170725723|ref|YP_001759749.1| hypothetical protein Swoo_1362 [Shewanella woodyi ATCC 51908]
gi|169811070|gb|ACA85654.1| protein of unknown function DUF88 [Shewanella woodyi ATCC 51908]
Length = 157
Score = 160 bits (406), Expect = 7e-38, Method: Composition-based stats.
Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 13/165 (7%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+KIALF+D N+Y + + A G +YRKL + ++ A Y GD Q
Sbjct: 1 MKKIALFVDVQNIYYTCRQAHGRQFNYRKLWQHISHEGEIVSATAYAIHKGDDGQL---- 56
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
D L + GF V K + + K DV + +D E + ++ +++ SGDG
Sbjct: 57 -KFQDALKHIGFDVKLKPFIQRADGS----AKGDWDVGITIDIMEAASEVDSIILLSGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
F L+ + +K I + V P + + L A + ++
Sbjct: 112 DFDLLMLKI---YQKYGIETQVYGVPGLTAKSLIDSAAKYHEIDD 153
>gi|15806586|ref|NP_295301.1| hypothetical protein DR_1578 [Deinococcus radiodurans R1]
gi|6459341|gb|AAF11139.1|AE002001_5 conserved hypothetical protein [Deinococcus radiodurans R1]
Length = 185
Score = 160 bits (405), Expect = 8e-38, Method: Composition-based stats.
Identities = 40/172 (23%), Positives = 78/172 (45%), Gaps = 10/172 (5%)
Query: 4 PREKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
R ++ +FID NLY S++ L +++ +L+ ++ A YT + +
Sbjct: 6 HRPRVGVFIDTQNLYHSARDLLERTVNFETILQVATEGRELVHAISYTV----EREGEAT 61
Query: 63 LHPLLDWLHYNGFQVV-AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
P + L GF+V + + G+ + + D+ + D F + L+ +V+ SG
Sbjct: 62 SRPFIYKLSTLGFKVRRMNLTLHHVTDGGKPIYEGNWDMGIVADMFRLMDHLDVIVLGSG 121
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
DG FT +V LQ + K+V +++ + +L AD F L ++ +
Sbjct: 122 DGDFTDIVEVLQERGKRVEVIAF----REHTAQKLIDAADRFTHLPDIEEGL 169
>gi|222479108|ref|YP_002565345.1| protein of unknown function DUF88 [Halorubrum lacusprofundi ATCC
49239]
gi|222452010|gb|ACM56275.1| protein of unknown function DUF88 [Halorubrum lacusprofundi ATCC
49239]
Length = 165
Score = 160 bits (405), Expect = 8e-38, Method: Composition-based stats.
Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 14/167 (8%)
Query: 3 DPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
P +++A+ D NLY S+++ +IDY LL+ + ++RA Y PE++
Sbjct: 5 HPDQRVAVLADSQNLYHSAQSVYSRNIDYSGLLEEAVNDRSLVRAIAYVIRADSPEEE-- 62
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
+ L GF+ K K F + K+ D+ +++DA + ++ +VI +G
Sbjct: 63 ---SFFEALRDIGFETKIKEIKTFADGS----KKADWDLGMSLDAVSLASHVDTVVICTG 115
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
DG F L + L+ + +V + S A+D+L AD F+DLA
Sbjct: 116 DGDFARLCSHLRHEGVRVEAMGFGNS----AADELIDAADDFVDLAE 158
>gi|291295060|ref|YP_003506458.1| hypothetical protein Mrub_0671 [Meiothermus ruber DSM 1279]
gi|290470019|gb|ADD27438.1| protein of unknown function DUF88 [Meiothermus ruber DSM 1279]
Length = 192
Score = 160 bits (405), Expect = 9e-38, Method: Composition-based stats.
Identities = 42/184 (22%), Positives = 86/184 (46%), Gaps = 14/184 (7%)
Query: 2 FDPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ P++++ LF+D NLY S++ G ++++ L++ + ++RA Y +
Sbjct: 11 WSPQQRVGLFVDTQNLYHSARDYYGQNVNFESLMRYAVANRQLVRATAYVV----EREHD 66
Query: 61 SPLHPLLDWLHYNGFQVVAK--VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVI 118
+ P + L GF+V KE T+ G+ + + D+ +A D L+ +V+
Sbjct: 67 TSAWPFIYKLSTIGFRVRRMNLTLKETTDE-GKPIYEGNWDMGIAADMVRLMHTLDVVVL 125
Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
SGDG F +V L + +V +++ S +L D F+ L ++N P
Sbjct: 126 GSGDGDFVDIVEVLMERGIRVEVIAF----KETTSQKLIDAVDRFIHLPEIENAF--VPS 179
Query: 179 EDKK 182
++++
Sbjct: 180 KERE 183
>gi|237755695|ref|ZP_04584304.1| RtsE [Sulfurihydrogenibium yellowstonense SS-5]
gi|237692145|gb|EEP61144.1| RtsE [Sulfurihydrogenibium yellowstonense SS-5]
Length = 174
Score = 160 bits (405), Expect = 9e-38, Method: Composition-based stats.
Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 14/176 (7%)
Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
+++A+F+D NLY S++ +++ +L I++RA+ Y + +Q
Sbjct: 6 YNNQRVAIFVDIQNLYYSARDTFNRKVNFESILYKTLGDRILVRAFAYIVKLQGVDQ--- 62
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFT----ENCGRKRVKSSMDVELAVDAFEQSEGLEHLV 117
++ L + G+QV K K F E +K+ D+ +A+DA SE ++ +
Sbjct: 63 --KGFINTLKHIGYQVREKEPKIFKRLDEEGNLWTTIKADWDMGIAIDAIALSEKIDVAI 120
Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
+ +GDG F LV LQ K KV I + + +L AD F+DL +I
Sbjct: 121 LTTGDGDFKDLVKYLQTKGVKVEIAAF----KQTTAKELIEVADEFIDLTTFGEDI 172
>gi|119356319|ref|YP_910963.1| hypothetical protein Cpha266_0482 [Chlorobium phaeobacteroides DSM
266]
gi|119353668|gb|ABL64539.1| protein of unknown function DUF88 [Chlorobium phaeobacteroides DSM
266]
Length = 287
Score = 159 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 52/172 (30%), Positives = 90/172 (52%), Gaps = 9/172 (5%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
++ A++IDGANL+ + ++LG+ ID+ +L+ F R + A YY V ++ +
Sbjct: 4 KRAAVYIDGANLFFTQRSLGWQIDFSRLITFFLDRYASVEARYYVPVSEPASEEQAA--- 60
Query: 66 LLDWLHYNGFQVVAKVAKE-FTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
L +G+ + +K K+ + G +K ++DVELAVDA + ++FSGD
Sbjct: 61 FTRVLAAHGYILTSKPVKKIVNKTTGEIIIKGNLDVELAVDALVGEIAYDTFILFSGDSD 120
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQ-LRRQADYFMDLAYLKNEIAR 175
F L+ AL+ K K+V + ST +++ + L F DLA L++ I
Sbjct: 121 FLPLLRALKEKGKEVLVYST----EGISAWELLIEPGIDFHDLAGLRDRIGH 168
>gi|91224643|ref|ZP_01259904.1| hypothetical protein V12G01_07878 [Vibrio alginolyticus 12G01]
gi|91190531|gb|EAS76799.1| hypothetical protein V12G01_07878 [Vibrio alginolyticus 12G01]
Length = 162
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
+ ++KIA+ +D N+Y + + A + DY + V+ A Y DP+Q
Sbjct: 4 ESKQKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATQGKEVVSARAYAIASNDPKQ--- 60
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
L GF+V+ K + + K DV + +DA E + +E +++ SG
Sbjct: 61 --RQFHHILRGVGFEVMLKPYIQRRDGS----SKGDWDVGITLDAIEIAPEVEEVILVSG 114
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
DG F+ LV +Q++ TV P + S L AD F+ +
Sbjct: 115 DGDFSLLVERIQQRFNNTV---TVYGVPKLTSQTLIDCADNFVAIDD 158
>gi|194333277|ref|YP_002015137.1| hypothetical protein Paes_0433 [Prosthecochloris aestuarii DSM 271]
gi|194311095|gb|ACF45490.1| protein of unknown function DUF88 [Prosthecochloris aestuarii DSM
271]
Length = 294
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 45/175 (25%), Positives = 83/175 (47%), Gaps = 15/175 (8%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
K +FIDGANL+ + + +G+ ID+ +L+ F + A YY G Q+
Sbjct: 6 NRKAGVFIDGANLFFTQRHMGWQIDFSRLIAFFMQCFDSVEARYYVPESGALSQEQVA-- 63
Query: 65 PLLDWLHYNGFQVVAKVAKE-FTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L NG+ + +K K+ + G +K ++DVEL VDA + + ++ SGD
Sbjct: 64 -FNRMLEANGYTITSKPVKKIVNKETGEVVMKGNLDVELVVDALTTASRYDSFILVSGDS 122
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQ----ADYFMDLAYLKNEIA 174
F L+ AL+ + K + + ST +++ +L + D + ++++I
Sbjct: 123 DFLPLIRALRSRGKDIQVYST----RGLSAWELVAEPGIGC---HDFSDIRSKIE 170
>gi|269962746|ref|ZP_06177088.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269832501|gb|EEZ86618.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 163
Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 13/167 (7%)
Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
++KIA+ +D N+Y + + A + DY + V+ A Y DP+Q
Sbjct: 5 SNKQKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATQGKEVVSARAYAIASNDPKQ--- 61
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
L GF+V+ K + + K DV + +DA E + ++ +++ SG
Sbjct: 62 --RQFHHILRGVGFEVMLKPYIQRRDGS----AKGDWDVGITLDAIEIAPEVDEVILVSG 115
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
DG F+ LV +Q++ K TV P + S L AD+F+ +
Sbjct: 116 DGDFSLLVERIQQRFNK---KVTVYGVPRLTSQTLIDCADHFVAVDD 159
>gi|297567250|ref|YP_003686222.1| hypothetical protein Mesil_2873 [Meiothermus silvanus DSM 9946]
gi|296851699|gb|ADH64714.1| protein of unknown function DUF88 [Meiothermus silvanus DSM 9946]
Length = 213
Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats.
Identities = 43/170 (25%), Positives = 84/170 (49%), Gaps = 17/170 (10%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
+IALFIDG+ +Y ++K LG+++D+R+++ F + + A+YY + +++
Sbjct: 6 RIALFIDGSYMYNAAKRLGWNVDHRRVIGQFATPEELYNAFYYAPITDSEDER---QQKF 62
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126
LD L + G+ V ++ + G R ++ +A D + + V+ SG G
Sbjct: 63 LDALVFMGYTVRSREVR------GEPRFEA----LIATDMLITAPRWDRAVVASGAGELA 112
Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
+ AL+ + K++ +V + LR QAD F+DL ++ + R
Sbjct: 113 HALGALRAQGKELYLVGVA----ELTDLWLRNQADRFLDLRDMREGLERQ 158
>gi|662866|emb|CAA87004.1| orf1 [Nostoc sp. PCC 7120]
Length = 157
Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats.
Identities = 45/163 (27%), Positives = 84/163 (51%), Gaps = 13/163 (7%)
Query: 17 LYASSKALGFDIDYRKLLKAF---RSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYN 73
++ + + D R++L+ F +S +I A++YT + +Q D L
Sbjct: 1 MFYAQQNEWVVFDPRRVLEYFKNEQSETTLINAFWYTGLKDPQDQ-----RGFRDALISL 55
Query: 74 GFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAAL 132
G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +V+FSGDG F + L
Sbjct: 56 GYTVRTKILKEYCDDSSGRYSQKANLDIEIVVDMFNTVDQYDRVVLFSGDGDFERAIELL 115
Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
+ K +T+VST M + +LR D ++DL +++ I +
Sbjct: 116 RSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDRIEK 154
>gi|89092681|ref|ZP_01165634.1| hypothetical protein MED92_15283 [Oceanospirillum sp. MED92]
gi|89083193|gb|EAR62412.1| hypothetical protein MED92_15283 [Oceanospirillum sp. MED92]
Length = 160
Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats.
Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 13/161 (8%)
Query: 7 KIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
KIA+F+D N+Y +++ A G +YRK +A ++ ++ A Y D Q
Sbjct: 3 KIAIFVDVQNIYYTTRQAFGGSFNYRKFWQAISTQGEIVEANAYAIERADDGQ-----KK 57
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
D L + GF V K + + K DV + +D EQ+ ++ +++ SGDG F
Sbjct: 58 FQDALRHIGFNVKLKPFIQRKDG----TAKGDWDVGITIDVLEQAAHVDKVILLSGDGDF 113
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
L+ ++ K + + V S ++ + L D++ +
Sbjct: 114 DLLLKKIRSTYK---VTTEVYSIEALTAKSLISATDHYHSI 151
>gi|327482342|gb|AEA85652.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166]
Length = 158
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 14/164 (8%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+KIALF D NLY + + A G DY L R ++ AY Y GDP QQ
Sbjct: 1 MKKIALFADVQNLYYTVRQAHGCHFDYSALWADVSRRGSIVEAYAYAIERGDPRQQQ--- 57
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF V K + ++ K DV + +D + + ++ +V+ SGDG
Sbjct: 58 --FQQILRKLGFTVKLKPYIQRSDGS----AKGDWDVGITIDVLDAAARVDEVVLASGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
F L+ ++ + +T P + + L R A ++ +
Sbjct: 112 DFDLLLERVRAAG----VEATAYGVPGLTAQSLIRAATRYVPIE 151
>gi|49081554|gb|AAT50177.1| PA3951 [synthetic construct]
Length = 168
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 15/164 (9%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
+KIA+F D NLY + + A G ++Y L ++ AY Y GDP QQ
Sbjct: 10 KKIAVFADVQNLYYTVRQAYGCHLNYAALWADIARGGSIVEAYAYAIDRGDPRQQQ---- 65
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
L GF V K + + K DV + +D + + ++ +V+ SGDG
Sbjct: 66 -FQQILRNLGFTVKLKPYIQRADGS----AKGDWDVGITIDVLDAAPRVDEVVLLSGDGD 120
Query: 125 FTTLVA-ALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
F L+ ++ +V+T P + ++ L R A ++ +
Sbjct: 121 FDLLLEKVIRAHG----VVATAYGVPGLTANALIRAASRYVPIE 160
>gi|262395374|ref|YP_003287227.1| hypothetical protein VEA_000074 [Vibrio sp. Ex25]
gi|262338968|gb|ACY52762.1| hypothetical protein VEA_000074 [Vibrio sp. Ex25]
Length = 162
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 44/167 (26%), Positives = 74/167 (44%), Gaps = 13/167 (7%)
Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
+ ++KIA+ +D N+Y + + A + DY + V+ A Y DP+Q
Sbjct: 4 ERKQKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATQGKEVVSARAYAIASNDPKQ--- 60
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
L GF+V+ K + + K DV + +DA E + +E +++ SG
Sbjct: 61 --RQFHHILRGVGFEVMLKPYIQRRDGS----SKGDWDVGITLDAIEIAPEVEEVILVSG 114
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
DG F+ LV +Q++ K TV P + S L AD F+ +
Sbjct: 115 DGDFSLLVERIQQRFNKTV---TVYGVPKLTSQTLIDCADNFVAIDD 158
>gi|218290176|ref|ZP_03494335.1| protein of unknown function DUF88 [Alicyclobacillus acidocaldarius
LAA1]
gi|258512267|ref|YP_003185701.1| hypothetical protein Aaci_2303 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|218239771|gb|EED06961.1| protein of unknown function DUF88 [Alicyclobacillus acidocaldarius
LAA1]
gi|257478993|gb|ACV59312.1| protein of unknown function DUF88 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 168
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 50/171 (29%), Positives = 90/171 (52%), Gaps = 9/171 (5%)
Query: 7 KIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
+++LF+DGAN Y + L + ID +KLL+ +S+ ++ A+YY
Sbjct: 2 RVSLFVDGANYYYMQRDKLKWTIDAQKLLEWAKSKGELVDAFYYIGRS---SPSDVREQK 58
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
LD L Y+G+ +V K KE + G K+++D+E+ +D F E + ++ SGDG F
Sbjct: 59 YLDMLAYSGYSIVTKDIKEIVQEDGSITRKANLDIEIVLDMFNTIENYDMAILVSGDGDF 118
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD-YFMDLAYLKNEIAR 175
+ L+ + KK ++ST + +LR A +F+D+ L++++ R
Sbjct: 119 ERALQLLRARGKKFIVLSTA----GFIASELRMVAGMHFIDVNTLRDQLER 165
>gi|15599146|ref|NP_252640.1| hypothetical protein PA3951 [Pseudomonas aeruginosa PAO1]
gi|107103468|ref|ZP_01367386.1| hypothetical protein PaerPA_01004538 [Pseudomonas aeruginosa PACS2]
gi|116051991|ref|YP_789166.1| hypothetical protein PA14_12750 [Pseudomonas aeruginosa UCBPP-PA14]
gi|218889766|ref|YP_002438630.1| hypothetical protein PLES_10241 [Pseudomonas aeruginosa LESB58]
gi|254242637|ref|ZP_04935959.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|296387523|ref|ZP_06876998.1| hypothetical protein PaerPAb_05192 [Pseudomonas aeruginosa PAb1]
gi|313109387|ref|ZP_07795349.1| hypothetical protein PA39016_001770011 [Pseudomonas aeruginosa
39016]
gi|9950139|gb|AAG07338.1|AE004813_5 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
gi|115587212|gb|ABJ13227.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|126196015|gb|EAZ60078.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|218769989|emb|CAW25751.1| conserved hypothetical protein [Pseudomonas aeruginosa LESB58]
gi|310881851|gb|EFQ40445.1| hypothetical protein PA39016_001770011 [Pseudomonas aeruginosa
39016]
Length = 167
Score = 158 bits (401), Expect = 2e-37, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 15/164 (9%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
+KIA+F D NLY + + A G ++Y L ++ AY Y GDP QQ
Sbjct: 10 KKIAVFADVQNLYYTVRQAYGCHLNYAALWADIARGGSIVEAYAYAIDRGDPRQQQ---- 65
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
L GF V K + + K DV + +D + + ++ +V+ SGDG
Sbjct: 66 -FQQILRNLGFTVKLKPYIQRADGS----AKGDWDVGITIDVLDAAPRVDEVVLLSGDGD 120
Query: 125 FTTLVA-ALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
F L+ ++ +V+T P + ++ L R A ++ +
Sbjct: 121 FDLLLEKVIRAHG----VVATAYGVPGLTANALIRAASRYVPIE 160
>gi|297566075|ref|YP_003685047.1| hypothetical protein Mesil_1654 [Meiothermus silvanus DSM 9946]
gi|296850524|gb|ADH63539.1| protein of unknown function DUF88 [Meiothermus silvanus DSM 9946]
Length = 195
Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats.
Identities = 41/173 (23%), Positives = 77/173 (44%), Gaps = 12/173 (6%)
Query: 2 FDPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ P +++ LF+D NLY S++ ++++ LLK S ++RA Y +
Sbjct: 14 YSPMQRVGLFVDTQNLYHSARDYYEKNVNFESLLKHAVSGRQLVRATAYVVEREGDTSAW 73
Query: 61 SPLHPLLDWLHYNGFQVVAK--VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVI 118
P + L G++V KE T+ G+ + + D+ +A D L+ +V+
Sbjct: 74 ----PFIYKLSTIGYRVRRMNLTLKETTDE-GKPIYEGNWDMGIAADMVRLMHTLDVVVL 128
Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
SGDG F ++ L + +V +V+ S +L D F+ L + +
Sbjct: 129 GSGDGDFVDIIEVLMERGIRVEVVAF----KETTSQRLIDAVDRFVHLPEIPD 177
>gi|323492730|ref|ZP_08097874.1| hypothetical protein VIBR0546_00630 [Vibrio brasiliensis LMG 20546]
gi|323313105|gb|EGA66225.1| hypothetical protein VIBR0546_00630 [Vibrio brasiliensis LMG 20546]
Length = 160
Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 15/166 (9%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
EK+A+F+D N+Y +++ + DY + V+ A Y DP+Q
Sbjct: 1 MEKVAIFVDVQNIYYTTRDKYRANFDYNQFWYIATEGREVVSANAYAIASHDPKQ----- 55
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF V K + + K DV LA+D FE + ++ +++ SGDG
Sbjct: 56 RQFHHILRGIGFNVQLKPFIQRNDGS----AKGDWDVGLALDVFETASQVDRVILLSGDG 111
Query: 124 CFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
F LV +Q + KV + P + + L A+ ++ +
Sbjct: 112 DFDVLVDRIQSRFGTKVDV----FGVPGLTAQSLIDVANNYIPIDE 153
>gi|28900837|ref|NP_800492.1| hypothetical protein VPA0982 [Vibrio parahaemolyticus RIMD 2210633]
gi|260362550|ref|ZP_05775470.1| conserved hypothetical protein [Vibrio parahaemolyticus K5030]
gi|260879204|ref|ZP_05891559.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034]
gi|260896739|ref|ZP_05905235.1| conserved hypothetical protein [Vibrio parahaemolyticus Peru-466]
gi|13506637|gb|AAK08637.1| hypothetical protein [Vibrio parahaemolyticus]
gi|28809283|dbj|BAC62325.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
2210633]
gi|308087322|gb|EFO37017.1| conserved hypothetical protein [Vibrio parahaemolyticus Peru-466]
gi|308094054|gb|EFO43749.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034]
gi|308115257|gb|EFO52797.1| conserved hypothetical protein [Vibrio parahaemolyticus K5030]
gi|328470741|gb|EGF41652.1| hypothetical protein VP10329_08072 [Vibrio parahaemolyticus 10329]
Length = 162
Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats.
Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 13/167 (7%)
Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
D +EKIA+ +D N+Y + + A + DY + V+ A Y DP+Q
Sbjct: 4 DHKEKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATQEKEVVSAKAYAIASNDPKQ--- 60
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
L GF+V+ K + + K DV + +DA E + ++ +++ SG
Sbjct: 61 --RQFHHILRGVGFEVMLKPYIQRRDGS----AKGDWDVGITLDAIEIAPDVDRVILVSG 114
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
DG F+ LV +Q++ K TV P + S L AD F+ +
Sbjct: 115 DGDFSLLVERIQQRYNK---KVTVYGVPRLTSQTLIDCADNFVAIDD 158
>gi|157835942|pdb|2QIP|A Chain A, Crystal Structure Of A Protein Of Unknown Function Vpa0982
From Vibrio Parahaemolyticus Rimd 2210633
Length = 165
Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats.
Identities = 45/167 (26%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
D +EKIA+ +D N+Y + + A + DY + V+ A Y DP+Q
Sbjct: 7 DHKEKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATQEKEVVSAKAYAIASNDPKQ--- 63
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
L GF+V K + + K DV + +DA E + ++ +++ SG
Sbjct: 64 --RQFHHILRGVGFEVXLKPYIQRRDGS----AKGDWDVGITLDAIEIAPDVDRVILVSG 117
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
DG F+ LV +Q++ K TV P + S L AD F+ +
Sbjct: 118 DGDFSLLVERIQQRYNK---KVTVYGVPRLTSQTLIDCADNFVAIDD 161
>gi|86608534|ref|YP_477296.1| hypothetical protein CYB_1055 [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557076|gb|ABD02033.1| conserved hypothetical protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 382
Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats.
Identities = 43/168 (25%), Positives = 75/168 (44%), Gaps = 12/168 (7%)
Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
PR+ + +FID ANL+AS++ G +DY LL + + Y+ V ++
Sbjct: 211 PRKALGVFIDAANLHASAQQWGSHLDYPSLLSWLAQGRSEMEVHVYSGV----DRHNLAQ 266
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L L G++VV K + K+++D EL VD E +++ SGDG
Sbjct: 267 RRFLRELRKQGYRVVTKPVVIHADGS----RKANLDGELIVDLMALHSHYETVLLLSGDG 322
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
F + ++R+ ++ + + + L R AD F+DL +
Sbjct: 323 DFVPALKHIRRQGCRLEVAA----YRPNTNPALIRIADQFVDLCAWQG 366
>gi|260901483|ref|ZP_05909878.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ4037]
gi|308107667|gb|EFO45207.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ4037]
Length = 162
Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats.
Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 13/167 (7%)
Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
D +EKIA+ +D N+Y + + A + DY + V+ A Y DP+Q
Sbjct: 4 DHKEKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATQEKEVVSAKAYAIASNDPKQ--- 60
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
L GF+V+ K + + K DV + +DA E + ++ +++ SG
Sbjct: 61 --RQFHHILRGVGFEVMLKPYIQRRDGS----AKGDWDVGITLDAIEIAPDVDRVILVSG 114
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
DG F+ LV +Q++ K TV P + S L AD F+ +
Sbjct: 115 DGDFSLLVERIQQRYNK---KVTVYGAPRLTSQTLIDCADNFVAIDD 158
>gi|328951205|ref|YP_004368540.1| Domain of unknown function DUF88 [Marinithermus hydrothermalis DSM
14884]
gi|328451529|gb|AEB12430.1| Domain of unknown function DUF88 [Marinithermus hydrothermalis DSM
14884]
Length = 186
Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats.
Identities = 44/177 (24%), Positives = 84/177 (47%), Gaps = 16/177 (9%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
E+I LFIDG+ +Y+++K +G+++D+R++L+ FR + A+YY + +++
Sbjct: 1 MERIGLFIDGSYIYSAAKRMGWNVDHRRVLEHFRGDRALYNAFYYAPITDPNDERQL--- 57
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
LD L + G+ V + + + N G V L D + E +I SG
Sbjct: 58 KFLDALVFMGYTVRSHEVRGESPNLG---------VYLVTDLLLTAPRWEVALISSGARE 108
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
V A++ K+V ++ P + +LR +D F+D+ + + R P +
Sbjct: 109 IAPAVEAVRAMGKEVRLL----GLPELTDLELRSSSDRFIDIREYREVLERQPGGRR 161
>gi|148977299|ref|ZP_01813913.1| hypothetical protein VSWAT3_11922 [Vibrionales bacterium SWAT-3]
gi|145963412|gb|EDK28676.1| hypothetical protein VSWAT3_11922 [Vibrionales bacterium SWAT-3]
Length = 157
Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats.
Identities = 44/165 (26%), Positives = 70/165 (42%), Gaps = 15/165 (9%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
E IA+ +D N+Y +++ + DY + V+ A+ Y DP+Q
Sbjct: 1 MENIAILVDVQNVYYTTRDKYRSNFDYNQFWYVATEGRNVVAAHAYAISSQDPKQ----- 55
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF V K + + K DV +A+DA E +E ++ +V+ SGDG
Sbjct: 56 RQFHHILRGVGFDVKLKPFIQRRDGS----AKGDWDVGIALDAIELAENVDTIVLVSGDG 111
Query: 124 CFTTLVAAL-QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
F LV + QR KKV + P + + L A F+ +
Sbjct: 112 DFEILVERIKQRFGKKVEV----YGVPGLTAQNLIDSASKFVPIE 152
>gi|330446321|ref|ZP_08309973.1| putative uncharacterized protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328490512|dbj|GAA04470.1| putative uncharacterized protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 159
Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 68/165 (41%), Gaps = 13/165 (7%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
EK+A+F+D N+Y + + + DY +I AY Y GD +Q
Sbjct: 1 MEKVAIFVDVQNIYYTVREKYHANFDYNAFWSEVSQDREIIAAYAYAIHKGDEKQ----- 55
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
+ L GF V K + ++ K DV + +D E + ++ +++ SGDG
Sbjct: 56 RQFQNILRAIGFDVKLKPFIQRSDGS----AKGDWDVGITLDVIEHAPEVDRIILLSGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
F LV +Q K + V P + + L A ++ ++
Sbjct: 112 DFDLLVEKVQTKYNAIV---EVYGVPGLTAASLINSATHYREIED 153
>gi|94985051|ref|YP_604415.1| hypothetical protein Dgeo_0945 [Deinococcus geothermalis DSM 11300]
gi|94555332|gb|ABF45246.1| protein of unknown function DUF88 [Deinococcus geothermalis DSM
11300]
Length = 181
Score = 157 bits (399), Expect = 4e-37, Method: Composition-based stats.
Identities = 39/172 (22%), Positives = 78/172 (45%), Gaps = 10/172 (5%)
Query: 4 PREKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
R ++ +FID NLY S++ L +++ +L++ ++ A YT + +
Sbjct: 6 SRPRVGVFIDTQNLYHSARDLLERTVNFETILRSATEGRELVHAIAYTV----EREGEAT 61
Query: 63 LHPLLDWLHYNGFQVV-AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
P + L G++V + G+ + + D+ + D + L+ +V+ SG
Sbjct: 62 ARPFIYKLSALGYKVRRMNLTLHHVTEGGKAIYEGNWDMGIVADMVRLIDHLDIVVLGSG 121
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
DG FT +V LQ + K+V +++ + +L AD F L L++ +
Sbjct: 122 DGDFTDVVEVLQERGKRVEVIAF----REHTAQKLIDAADRFTHLPDLEDAL 169
>gi|260778792|ref|ZP_05887684.1| hypothetical protein VIC_004198 [Vibrio coralliilyticus ATCC
BAA-450]
gi|260604956|gb|EEX31251.1| hypothetical protein VIC_004198 [Vibrio coralliilyticus ATCC
BAA-450]
Length = 160
Score = 157 bits (399), Expect = 5e-37, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 74/166 (44%), Gaps = 15/166 (9%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
EK+A+F+D N+Y +++ + DY + V A+ Y DP+Q+
Sbjct: 1 MEKVAIFVDVQNIYYTTREKYRANFDYNEFWYVATEGRDVTEAHAYAIASHDPKQR--QF 58
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
H +L + GF V K + + K DV +A+D +E + ++ +++ SGDG
Sbjct: 59 HHILRGI---GFNVKLKPFIQRQDGS----AKGDWDVGIALDVYEAASKVDRVILLSGDG 111
Query: 124 CFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
F LV +Q + KV + P +++ L D F+ +
Sbjct: 112 DFDVLVKRVQERFGTKVDV----FGVPGLSAQSLIDVCDKFIPIEE 153
>gi|163803423|ref|ZP_02197297.1| hypothetical protein 1103602000421_AND4_08566 [Vibrio sp. AND4]
gi|159172772|gb|EDP57618.1| hypothetical protein AND4_08566 [Vibrio sp. AND4]
Length = 162
Score = 157 bits (398), Expect = 6e-37, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 13/167 (7%)
Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
+ ++KIA+ +D N+Y + + A + DY + + V A Y DP+Q
Sbjct: 4 ESKQKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATNGKEVASARAYAIASNDPKQ--- 60
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
L GF+V+ K + + K DV + +DA E + ++ +++ SG
Sbjct: 61 --RQFHHILRGVGFEVMLKPYIQRRDGS----AKGDWDVGITLDAIEAAAEVDEIILVSG 114
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
DG F+ LV +Q++ K TV P + S L AD F+ +
Sbjct: 115 DGDFSMLVERIQQRFNK---KVTVYGVPKLTSQNLIDCADNFVAIDE 158
>gi|320450466|ref|YP_004202562.1| hypothetical protein TSC_c13940 [Thermus scotoductus SA-01]
gi|320150635|gb|ADW22013.1| hypothetical protein TSC_c13940 [Thermus scotoductus SA-01]
Length = 178
Score = 157 bits (398), Expect = 6e-37, Method: Composition-based stats.
Identities = 37/182 (20%), Positives = 77/182 (42%), Gaps = 12/182 (6%)
Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
P +++ +F+D NLY S++ ++++ LL+ ++RA Y +
Sbjct: 6 HPDQRVGVFVDTQNLYHSARDYYERNVNFESLLRFAVGGRRLVRATAYVVEKEGDTSAW- 64
Query: 62 PLHPLLDWLHYNGFQVVAK--VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119
P + L G++V KE E G+ + + D+ +A D L+ +V+
Sbjct: 65 ---PFIYKLSTIGYRVRRMYLTVKELGEG-GKPIYEGNWDMGIAADMVRLMPHLDVVVLG 120
Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
SGDG F ++ L + +V +++ + +L D F+ L + N +
Sbjct: 121 SGDGDFVEILEVLMERGIRVEVIAF----RETTAQKLIDAVDRFVHLPDIPNAFMEPKNT 176
Query: 180 DK 181
++
Sbjct: 177 ER 178
>gi|330969505|gb|EGH69571.1| hypothetical protein PSYAR_03309 [Pseudomonas syringae pv. aceris
str. M302273PT]
Length = 158
Score = 157 bits (397), Expect = 7e-37, Method: Composition-based stats.
Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 13/164 (7%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+KIA+F D NLY + + A G +Y L R ++ A+ Y GD +QQ
Sbjct: 1 MKKIAVFADVQNLYYTVRQAHGCHFNYAALWADISKRGEIVHAFAYAIDRGDSKQQQ--- 57
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF V K + ++ K DV + +D + + ++ +V+ SGDG
Sbjct: 58 --FQQILRNLGFTVRLKPYIQRSDGS----AKGDWDVGITIDIMDYAPQVDEIVLASGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
F L+ + K + + P + ++ L R A ++ +
Sbjct: 112 DFDMLLERVISK---HGVEAVAYGVPGLTANSLIRAASRYVPIE 152
>gi|163783881|ref|ZP_02178857.1| hypothetical protein HG1285_05285 [Hydrogenivirga sp. 128-5-R1-1]
gi|159880844|gb|EDP74372.1| hypothetical protein HG1285_05285 [Hydrogenivirga sp. 128-5-R1-1]
Length = 174
Score = 157 bits (397), Expect = 7e-37, Method: Composition-based stats.
Identities = 45/176 (25%), Positives = 80/176 (45%), Gaps = 14/176 (7%)
Query: 3 DPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
+++A+F+D NLY S++ +D+ K+L + +IRA Y + +Q
Sbjct: 6 YKNQRVAVFLDVQNLYYSARDVFNRKVDFEKVLFKILNGRQLIRALAYIIKLQGVDQ--- 62
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFT----ENCGRKRVKSSMDVELAVDAFEQSEGLEHLV 117
+ L + G+++ K K + E +K+ D+ +A+DA +E ++ V
Sbjct: 63 --KGFISSLKHIGYEIKEKEPKIYKRLDEEGNLITTIKADWDMGIAMDAISIAEKIDVAV 120
Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
+ +GDG F LV L K KV I + + +L D F+DL + EI
Sbjct: 121 LTTGDGDFADLVKYLHTKGVKVEIAAF----KQTTAKELIEVCDEFIDLTHFGEEI 172
>gi|153836889|ref|ZP_01989556.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810]
gi|149749847|gb|EDM60592.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810]
Length = 162
Score = 156 bits (396), Expect = 9e-37, Method: Composition-based stats.
Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 13/167 (7%)
Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
D +EKIA+ +D N+Y + + A + DY + V+ A Y DP+Q
Sbjct: 4 DHKEKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATQEKEVVSAKAYAIASNDPKQ--- 60
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
L GF+V+ K + + K DV + +DA E + ++ +++ SG
Sbjct: 61 --RQFHHILRGVGFEVMLKPYIQRRDGS----AKGDWDVGITLDAIEITPDVDRVILVSG 114
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
DG F+ LV +Q++ K TV P + S L AD F+ +
Sbjct: 115 DGDFSLLVERIQQRYNK---KVTVYGVPRLTSQTLIDCADNFVAIDD 158
>gi|332139998|ref|YP_004425736.1| hypothetical protein MADE_1002950 [Alteromonas macleodii str. 'Deep
ecotype']
gi|327550020|gb|AEA96738.1| hypothetical protein MADE_1002950 [Alteromonas macleodii str. 'Deep
ecotype']
Length = 156
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 74/164 (45%), Gaps = 14/164 (8%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+K L +D N+Y + + A + +Y + + + A+ Y GD +Q
Sbjct: 1 MKKALLLVDVQNVYYTCRQAYKRNFNYNRFWRELSYNLDIEHAFAYAIDKGDSKQ----- 55
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
+ L GF+V K + + K DV + VDA E + ++ +++ SGDG
Sbjct: 56 REFQNILRAIGFEVKLKPFIQRADGS----AKGDWDVGITVDALEHASQVDEIILVSGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
F LV AL+ K K VT+ P++ ++ +++ A ++ +
Sbjct: 112 DFDILVNALKEKGKTVTV----YGVPALTAESIQKVATRYVPIN 151
>gi|330895533|gb|EGH27843.1| hypothetical protein PSYJA_01969 [Pseudomonas syringae pv. japonica
str. M301072PT]
gi|330938177|gb|EGH41874.1| hypothetical protein PSYPI_05358 [Pseudomonas syringae pv. pisi
str. 1704B]
gi|330961649|gb|EGH61909.1| hypothetical protein PMA4326_24166 [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 158
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 13/164 (7%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+KIA+F D NLY + + A G +Y L R ++ A+ Y GD +QQ
Sbjct: 1 MKKIAVFADVQNLYYTVRQAHGCHFNYAALWADISKRGEIVHAFAYAIDRGDSKQQQ--- 57
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF V K + ++ K DV + +D + + ++ +V+ SGDG
Sbjct: 58 --FQQILRNLGFTVRLKPYIQRSDGS----AKGDWDVGITIDIMDFAPQVDEIVLASGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
F L+ + K + + P + ++ L R A ++ +
Sbjct: 112 DFDMLLERVISK---HGVEAVAYGVPGLTANSLIRAASRYVPIE 152
>gi|71736408|ref|YP_276474.1| hypothetical protein PSPPH_4358 [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|257482175|ref|ZP_05636216.1| hypothetical protein PsyrptA_02837 [Pseudomonas syringae pv. tabaci
ATCC 11528]
gi|289675840|ref|ZP_06496730.1| hypothetical protein PsyrpsF_21381 [Pseudomonas syringae pv.
syringae FF5]
gi|298488862|ref|ZP_07006887.1| hypothetical protein PSA3335_4345 [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|71556961|gb|AAZ36172.1| uncharacterized conserved protein [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|298156615|gb|EFH97710.1| hypothetical protein PSA3335_4345 [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|320322652|gb|EFW78745.1| hypothetical protein PsgB076_22027 [Pseudomonas syringae pv.
glycinea str. B076]
gi|320330563|gb|EFW86542.1| hypothetical protein PsgRace4_08595 [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330873569|gb|EGH07718.1| hypothetical protein Pgy4_04537 [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330888791|gb|EGH21452.1| hypothetical protein PSYMO_08069 [Pseudomonas syringae pv. mori
str. 301020]
gi|330987664|gb|EGH85767.1| hypothetical protein PLA107_21753 [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|331011359|gb|EGH91415.1| hypothetical protein PSYTB_17135 [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 158
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 13/164 (7%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+KIA+F D NLY + + A G +Y L R ++ A+ Y GD +QQ
Sbjct: 1 MKKIAVFADVQNLYYTVRQAHGCHFNYAALWADISKRGEIVHAFAYAIDRGDSKQQQ--- 57
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF V K + ++ K DV + +D + + ++ +V+ SGDG
Sbjct: 58 --FQQILRNLGFTVRLKPYIQRSDGS----AKGDWDVGITIDIMDFAPQVDEVVLASGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
F L+ + K + + P + ++ L R A ++ +
Sbjct: 112 DFDMLLERVISK---HGVEAVAYGVPGLTANSLIRAASRYVPIE 152
>gi|66047528|ref|YP_237369.1| hypothetical protein Psyr_4301 [Pseudomonas syringae pv. syringae
B728a]
gi|302184786|ref|ZP_07261459.1| hypothetical protein Psyrps6_00540 [Pseudomonas syringae pv.
syringae 642]
gi|63258235|gb|AAY39331.1| Protein of unknown function DUF88 [Pseudomonas syringae pv.
syringae B728a]
Length = 158
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 13/164 (7%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+KIA+F D NLY + + A G +Y L R ++ A+ Y GD +QQ
Sbjct: 1 MKKIAVFADVQNLYYTVRQAHGCHFNYAALWADISKRGEIVHAFAYAIDRGDSKQQQ--- 57
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF V K + ++ K DV + +D + + ++ +V+ SGDG
Sbjct: 58 --FQQILRNLGFTVRLKPYIQRSDGS----AKGDWDVGITIDIMDFAPQVDEIVLASGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
F L+ + K + + P + ++ L R A ++ +
Sbjct: 112 DFDMLLERVISK---HGVEAVAYGVPGLTANSLIRAASRYVPIE 152
>gi|189347490|ref|YP_001944019.1| hypothetical protein Clim_2008 [Chlorobium limicola DSM 245]
gi|189341637|gb|ACD91040.1| protein of unknown function DUF88 [Chlorobium limicola DSM 245]
Length = 304
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 56/178 (31%), Positives = 96/178 (53%), Gaps = 9/178 (5%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
+K ALFIDGANL+ + + LG+ ID+ +L+ F +R V+ A YY P +
Sbjct: 28 MSMQKAALFIDGANLFYTQRHLGWQIDFSRLMLYFTNRYTVVSARYYVPSPDPPSEDQVA 87
Query: 63 LHPLLDWLHYNGFQVVAKVAKE-FTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
+ + L +GF++++K K+ + G +K ++D+ELAVDA E V+FSG
Sbjct: 88 FNRV---LITHGFEIISKPVKKIVNRDTGEIIMKGNLDIELAVDAMLTEHQFEVFVLFSG 144
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD-YFMDLAYLKNEIARDPD 178
D F L+ A+Q K K V++ ST +++ +L +D F D++ + E+++
Sbjct: 145 DSDFLPLIMAMQMKGKTVSVFST----RGISARELYSGSDMDFHDISLMAVEMSQSQS 198
>gi|330976912|gb|EGH76935.1| hypothetical protein PSYAP_09660 [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 158
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 41/164 (25%), Positives = 71/164 (43%), Gaps = 13/164 (7%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+KIA+F D NLY + + A G +Y L R R ++ A+ Y GD +QQ
Sbjct: 1 MKKIAVFADVQNLYYTVRQAHGCHFNYAALWADIRKRGEIVHAFAYAIDRGDSKQQQ--- 57
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF V K + ++ K DV + +D + + ++ +V+ SGDG
Sbjct: 58 --FQQILRNLGFTVRLKPYIQRSDGS----AKGDWDVGITIDIMDFAPQVDEIVLASGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
F L+ + K + + P + ++ L R A ++ +
Sbjct: 112 DFDMLLERVISK---HGVEAVAYGVPGLTANSLIRAASRYVPIE 152
>gi|86146656|ref|ZP_01064977.1| hypothetical protein MED222_07105 [Vibrio sp. MED222]
gi|218676438|ref|YP_002395257.1| hypothetical protein VS_II0673 [Vibrio splendidus LGP32]
gi|85835503|gb|EAQ53640.1| hypothetical protein MED222_07105 [Vibrio sp. MED222]
gi|218324706|emb|CAV26328.1| Conserved hypothetical protein [Vibrio splendidus LGP32]
Length = 157
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 41/165 (24%), Positives = 68/165 (41%), Gaps = 15/165 (9%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
E IA+ +D N+Y +++ + DY + V+ A Y DP+Q
Sbjct: 1 MENIAILVDVQNVYYTTRDKYRSNFDYNQFWYVATEGRNVVEANAYAISSQDPKQ----- 55
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF V K + + K DV +A+DA E +E ++ +V+ SGDG
Sbjct: 56 RQFHHILRGVGFNVKLKPFIQRRDGS----AKGDWDVGIALDAIELAETVDTIVLVSGDG 111
Query: 124 CFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
F LV ++ + K V + P + + L A F+ +
Sbjct: 112 DFEILVERIKERFGKPVEV----YGVPGLTAQNLIDSASKFVPIE 152
>gi|218295524|ref|ZP_03496337.1| protein of unknown function DUF88 [Thermus aquaticus Y51MC23]
gi|218244156|gb|EED10682.1| protein of unknown function DUF88 [Thermus aquaticus Y51MC23]
Length = 179
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 77/182 (42%), Gaps = 11/182 (6%)
Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
+++ +F+D NLY S++ ++++ LL+ ++RA Y +
Sbjct: 7 HQDQRVGVFVDTQNLYHSARDYYERNVNFESLLRFAVGGRRLVRATAYVVEKEGDTSAW- 65
Query: 62 PLHPLLDWLHYNGFQVVAK-VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
P + L G++V + + T GR + + D+ +A D L+ +V+ S
Sbjct: 66 ---PFIYKLSTIGYRVRRMYLTVKETGEGGRPIYEGNWDMGIAADMVRLMPYLDVVVLGS 122
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG F ++ L + +V +++ + +L D F+ L + N +P
Sbjct: 123 GDGDFVEILEVLMERGIRVEVIAF----RETTAQRLIDAVDRFVHLPEIPNPFM-EPKNP 177
Query: 181 KK 182
++
Sbjct: 178 ER 179
>gi|254481697|ref|ZP_05094940.1| conserved hypothetical protein [marine gamma proteobacterium
HTCC2148]
gi|214037826|gb|EEB78490.1| conserved hypothetical protein [marine gamma proteobacterium
HTCC2148]
Length = 200
Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats.
Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 13/163 (7%)
Query: 6 EKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
EKI +F+D N+Y + + G + DY K ++ AY Y T GD +Q
Sbjct: 44 EKITIFVDVQNIYYTCRQTYGRNFDYNKFWAEVTQNRELVGAYAYATDRGDAKQMQ---- 99
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
LH GF V K + + K+ D+ +A+D +E ++ + +V+ +GDG
Sbjct: 100 -FQSILHAIGFTVKLKPVLKRRDGS----TKADWDIGIALDVYEAAQQCDTVVLLTGDGD 154
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
F L+ ++R + V P++ SD L A F+ +
Sbjct: 155 FGLLLDRIKR---RFDTNCEVYGVPALTSDILISAASRFVPID 194
>gi|70732718|ref|YP_262481.1| hypothetical protein PFL_5413 [Pseudomonas fluorescens Pf-5]
gi|68347017|gb|AAY94623.1| conserved hypothetical protein [Pseudomonas fluorescens Pf-5]
Length = 159
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 13/164 (7%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+KIA+F D NLY + + A G +Y L + ++ AY Y GD +QQ
Sbjct: 1 MKKIAVFADVQNLYYTVRQAYGCHFNYAALWADISKQGQIVEAYAYAIDRGDSKQQQ--- 57
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF V K + ++ K DV + +D + + ++ +V+ SGDG
Sbjct: 58 --FQQILRNLGFTVKLKPYIQRSDGS----AKGDWDVGITIDIMDAAAHVDEVVLASGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
F L+ + K + + P + ++ L R A ++ +
Sbjct: 112 DFDLLLERIIHK---HGVSAVAYGVPGLTANSLIRAATRYVPIE 152
>gi|254507966|ref|ZP_05120094.1| conserved hypothetical protein [Vibrio parahaemolyticus 16]
gi|219549074|gb|EED26071.1| conserved hypothetical protein [Vibrio parahaemolyticus 16]
Length = 161
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 15/166 (9%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
EKIA+F+D N+Y +++ + DY + V+ A Y DP+Q
Sbjct: 1 MEKIAIFVDVQNIYYTTRDKYRANFDYNEFWYLATEGKEVVEAKAYAIASTDPKQ----- 55
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF V K + + K DV +A+D +E + ++ +++ SGDG
Sbjct: 56 RQFHHILRGIGFDVKLKPYIQRADGS----TKGDWDVGIALDVYEAANKVDRVILLSGDG 111
Query: 124 CFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
F LV +Q++ KV + S P + + L D + +
Sbjct: 112 DFEILVERIQQRFGTKVDVYS----VPGLTAQALIDVCDKHIPIEE 153
>gi|152985348|ref|YP_001346543.1| hypothetical protein PSPA7_1157 [Pseudomonas aeruginosa PA7]
gi|150960506|gb|ABR82531.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
Length = 167
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 41/164 (25%), Positives = 71/164 (43%), Gaps = 15/164 (9%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
+KIA+F D NLY + + A G ++Y L R ++ AY Y GDP QQ
Sbjct: 10 KKIAVFADVQNLYYTVRQAYGCHLNYAALWADIARRGRIVEAYAYAIDRGDPRQQQ---- 65
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
L GF V K + + K DV + +D + + ++ +V+ SGDG
Sbjct: 66 -FQRILRNLGFTVKLKPYIQRADGS----AKGDWDVGITIDVLDAAPRVDEVVLLSGDGD 120
Query: 125 FTTLVA-ALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
F L+ ++ + ++ P + ++ L R A ++ +
Sbjct: 121 FDLLLEKVIRAHG----VEASAYGVPGLTANALIRAASRYVPIE 160
>gi|84393278|ref|ZP_00992039.1| hypothetical protein V12B01_14530 [Vibrio splendidus 12B01]
gi|84376103|gb|EAP92990.1| hypothetical protein V12B01_14530 [Vibrio splendidus 12B01]
Length = 157
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 41/165 (24%), Positives = 68/165 (41%), Gaps = 15/165 (9%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
E IA+ +D N+Y +++ + DY + V+ A Y DP+Q
Sbjct: 1 MENIAILVDVQNVYYTTRDKYRSNFDYNQFWYVATEGRNVVAANAYAISSQDPKQ----- 55
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF V K + + K DV +A+DA E +E ++ +V+ SGDG
Sbjct: 56 RQFHHILRGVGFNVKLKPFIQRRDGS----AKGDWDVGIALDAIELAETVDTIVLVSGDG 111
Query: 124 CFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
F LV ++ + K V + P + + L A F+ +
Sbjct: 112 DFEILVERIKERFGKPVEV----YGVPGLTAQNLIDSASKFVPIE 152
>gi|291297150|ref|YP_003508548.1| hypothetical protein Mrub_2781 [Meiothermus ruber DSM 1279]
gi|290472109|gb|ADD29528.1| protein of unknown function DUF88 [Meiothermus ruber DSM 1279]
Length = 190
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 47/170 (27%), Positives = 85/170 (50%), Gaps = 17/170 (10%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
K ALFIDG+ +Y ++K LG++ID+RK + F + A+YY V +++
Sbjct: 2 KTALFIDGSYMYDAAKRLGWNIDHRKAIGVFSKPEDLYNAFYYAPVTDSNDER---QQKF 58
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126
LD L + G+ V ++ E G R ++ +A D + E V+ SG G
Sbjct: 59 LDALVFMGYTVRSR------ETHGDPRFEA----MIATDLLVTAPRWERAVVASGSGDLA 108
Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
++AL+ + K++ ++ P + +LR Q+D ++DL L+ ++ R
Sbjct: 109 HTLSALRAQGKEIHLL----GVPELTDLELRNQSDRYLDLRELQAQLERT 154
>gi|163782049|ref|ZP_02177048.1| hypothetical protein HG1285_17989 [Hydrogenivirga sp. 128-5-R1-1]
gi|159882581|gb|EDP76086.1| hypothetical protein HG1285_17989 [Hydrogenivirga sp. 128-5-R1-1]
Length = 165
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 13/171 (7%)
Query: 5 REKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
++ +FIDG NLY K L ID KL++ F+ + ++Y + ++Q
Sbjct: 1 MKRAGIFIDGTNLYFVQKNFLHRKIDIVKLVEYFKRFYSIYNVFFYLAYREEDDKQ---- 56
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L ++G VV K K + +K ++DVE+ +D + + V+ SGD
Sbjct: 57 EKFYRMLAFSGITVVRKPLKHLPDGS----LKGNLDVEIVIDMLLTKDNYDVAVLCSGDS 112
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
F L+ L+ K+V VST S +S ++ AD ++DL + EI
Sbjct: 113 DFEKLINVLRSFGKEVVCVSTRDS----SSIEVVNAADRYIDLRDIIEEIK 159
>gi|323497755|ref|ZP_08102770.1| hypothetical protein VISI1226_04395 [Vibrio sinaloensis DSM 21326]
gi|323317231|gb|EGA70227.1| hypothetical protein VISI1226_04395 [Vibrio sinaloensis DSM 21326]
Length = 160
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 72/166 (43%), Gaps = 15/166 (9%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
EKIA+F+D N+Y +++ + DY + V+ A Y DP+Q
Sbjct: 1 MEKIAIFVDVQNIYYTTRDKYRANFDYNQFWYVATEGQQVVSASAYAIASTDPKQ----- 55
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF V K + ++ K DV +A+D +E + ++ +++ SGDG
Sbjct: 56 RQFHHILRGIGFDVKLKPYIQRSDGS----TKGDWDVGIALDVYELASQVDRVILLSGDG 111
Query: 124 CFTTLVAALQRKV-KKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
F LV +Q++ KV + + P + + L D F+ +
Sbjct: 112 DFEMLVTRIQQRFATKVDV----YAVPGLTAQNLIDVCDKFIPIDE 153
>gi|226356465|ref|YP_002786205.1| hypothetical protein Deide_14960 [Deinococcus deserti VCD115]
gi|226318455|gb|ACO46451.1| conserved hypothetical protein [Deinococcus deserti VCD115]
Length = 193
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 39/172 (22%), Positives = 77/172 (44%), Gaps = 10/172 (5%)
Query: 4 PREKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
R ++ LF+D NLY S++ L +++ +L ++ A YT + +
Sbjct: 6 QRPRVGLFVDTQNLYHSARDLLERTVNFETILNVATEGRELVHAISYTV----EREGEAT 61
Query: 63 LHPLLDWLHYNGFQVV-AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
P + L G++V + + G+ + + D+ + D + L+ +V+ SG
Sbjct: 62 ARPFIYKLSALGYKVRRMNLTLHHVTDGGKAIYEGNWDMGIVADMVRLMDHLDIVVLGSG 121
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
DG +T +V LQ + K+V +++ + +L AD FM L L+ +
Sbjct: 122 DGDYTEIVEVLQERGKRVEVIAF----REHTAQKLIDAADRFMHLPDLEGAL 169
>gi|257389218|ref|YP_003178991.1| hypothetical protein Hmuk_3179 [Halomicrobium mukohataei DSM 12286]
gi|257171525|gb|ACV49284.1| protein of unknown function DUF88 [Halomicrobium mukohataei DSM
12286]
Length = 165
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 41/171 (23%), Positives = 77/171 (45%), Gaps = 14/171 (8%)
Query: 3 DPREKIALFIDGANLYASSKALG-FDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
P +++ + D NLY ++++L +IDY LL + + RA Y P+++
Sbjct: 5 HPGQRVGVLADAQNLYHTARSLHTRNIDYEALLDEAVNDRALTRAIAYVIRANSPDEE-- 62
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
+ L GF+ K K F G K+ DV +++DA + ++ +V+ +G
Sbjct: 63 ---SFFEALEDIGFETRIKDIKTF----GDGSKKADWDVGMSLDAVSLAPHVDTVVLITG 115
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
DG F L L+ + KV + +++L AD+F +L+ +
Sbjct: 116 DGDFARLCRYLRHEGVKVETMGF----EESTAEELVEAADHFRNLSDDAEQ 162
>gi|320451037|ref|YP_004203133.1| hypothetical protein TSC_c19750 [Thermus scotoductus SA-01]
gi|320151206|gb|ADW22584.1| hypothetical protein TSC_c19750 [Thermus scotoductus SA-01]
Length = 182
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 84/170 (49%), Gaps = 17/170 (10%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
++ALFIDG+ +Y ++K LG+++D+R++L F + + A+YY + +++
Sbjct: 2 RVALFIDGSYMYLATKRLGWNVDHRRVLTQFATPEQLYNAFYYVPITDPEDER---QQRF 58
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126
+D L + G+ V +++ + G R ++ M A D + + ++ SG G
Sbjct: 59 IDALVFMGYTVRSRLVR------GEARFEAMM----ATDLLTTAPRWDRAIVASGSGELA 108
Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
+ L+ K++ ++ +A +LR QAD F++L + + R
Sbjct: 109 HTFSTLRAMGKEIHLL----GVHELADLELRNQADRFLNLPEWREVLERT 154
>gi|91201953|emb|CAJ75013.1| conserved hypothetical protein [Candidatus Kuenenia
stuttgartiensis]
Length = 177
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 41/167 (24%), Positives = 72/167 (43%), Gaps = 14/167 (8%)
Query: 3 DPREKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
+ ++I +F+D N++ S+KAL IDY KLL ++RA Y D +Q
Sbjct: 8 NSPQRIGVFVDVQNMFYSAKALHQSKIDYSKLLLEIVGGRNLVRAIAYIVQKPDVDQS-- 65
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
D L G+++ K + + K D+ +A+D + L+ +V+ +G
Sbjct: 66 ---SFTDALCRLGYEIKTKDLRLRPDG----TAKGDWDMGIAIDTISIASKLDTVVLVTG 118
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
DG F LV L+ +V VS S + +L + + +
Sbjct: 119 DGDFVPLVELLKYHGCRVETVSFRRS----TAIELINVSTKYTAIEE 161
>gi|92112887|ref|YP_572815.1| hypothetical protein Csal_0758 [Chromohalobacter salexigens DSM
3043]
gi|91795977|gb|ABE58116.1| protein of unknown function DUF88 [Chromohalobacter salexigens DSM
3043]
Length = 158
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 70/163 (42%), Gaps = 15/163 (9%)
Query: 7 KIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
++A+F+D N+Y + + A G DYR+ + V+ Y T GD +Q
Sbjct: 3 RVAIFVDTQNVYYTVREAYGKHFDYRRFWARATANREVLTVRCYATDKGDAKQ-----RE 57
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
+ L GF+V K + + K DV + +DA E + + +V+ SGDG F
Sbjct: 58 FQNILRSIGFEVRLKPFIQRADGS----AKGDWDVGITLDAIEYAAQADVVVLVSGDGDF 113
Query: 126 TTLVAALQR-KVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
L ++ K+V + P + ++ L A F+ +
Sbjct: 114 DLLAEKIREVHGKRVEV----YGVPKLTANSLINAASQFIPIE 152
>gi|330504961|ref|YP_004381830.1| hypothetical protein MDS_4047 [Pseudomonas mendocina NK-01]
gi|328919247|gb|AEB60078.1| hypothetical protein MDS_4047 [Pseudomonas mendocina NK-01]
Length = 159
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 41/164 (25%), Positives = 70/164 (42%), Gaps = 14/164 (8%)
Query: 5 REKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+KIA+F D NLY + + + G DY L R +++ AY Y GD +QQ
Sbjct: 1 MKKIAVFADVQNLYYTVRQVHGCHFDYSVLWAEVSRRGVIVEAYAYAIDRGDAKQQQ--- 57
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF V K + + K DV + +D + E ++ +V+ SGDG
Sbjct: 58 --FQQILRKLGFTVKLKPYIQRADGS----AKGDWDVGITIDVLDAVERVDEIVLASGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
F L+ ++ + + + P + + L R A ++ +
Sbjct: 112 DFDLLLERVRSRG----VEAIAFGAPGLTAQSLIRAASLYVPIE 151
>gi|90414813|ref|ZP_01222781.1| hypothetical protein P3TCK_17379 [Photobacterium profundum 3TCK]
gi|90324118|gb|EAS40703.1| hypothetical protein P3TCK_17379 [Photobacterium profundum 3TCK]
Length = 159
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 69/166 (41%), Gaps = 15/166 (9%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
EK+A+F+D N+Y + K + DY V+ AY Y GD +Q
Sbjct: 1 MEKVAIFVDVQNIYYTVKDKYKCNFDYNAFWAEATQGREVVAAYAYAIHRGDEKQGQ--- 57
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
+ L GF+V K + ++ K DV + +D E + ++ +++ SGDG
Sbjct: 58 --FQNILRGIGFEVKLKPFIQRSDGS----AKGDWDVGITLDVIEHAGDVDRVILLSGDG 111
Query: 124 CFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
F LV +Q K V + P + + L A Y+ ++
Sbjct: 112 DFDLLVDKVQTKYGVDVEV----YGVPGLTATSLINTAHYYREIES 153
>gi|77461146|ref|YP_350653.1| hypothetical protein Pfl01_4925 [Pseudomonas fluorescens Pf0-1]
gi|77385149|gb|ABA76662.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
Length = 159
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 13/164 (7%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+KIA+F D NLY + + A G +Y L ++ AY Y GD +QQ
Sbjct: 1 MKKIAVFADVQNLYYTVRQAYGCHFNYAALWADVSQHGQIVEAYAYAIDRGDSKQQQ--- 57
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF V K + ++ K DV + +D + ++ ++ +V+ SGDG
Sbjct: 58 --FQQILRNLGFTVKLKPYIQRSDGS----AKGDWDVGITLDIMDAADHVDEIVLASGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
F L+ + K + + P + ++ L R A ++ +
Sbjct: 112 DFDMLLERIINK---HGVQAVAYGVPGLTANSLIRAASRYVPIE 152
>gi|213966787|ref|ZP_03394938.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
gi|301383296|ref|ZP_07231714.1| hypothetical protein PsyrptM_11692 [Pseudomonas syringae pv. tomato
Max13]
gi|302062465|ref|ZP_07254006.1| hypothetical protein PsyrptK_20968 [Pseudomonas syringae pv. tomato
K40]
gi|302133447|ref|ZP_07259437.1| hypothetical protein PsyrptN_18744 [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|213928637|gb|EEB62181.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
gi|330873520|gb|EGH07669.1| hypothetical protein PSYMP_03990 [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
gi|330967689|gb|EGH67949.1| hypothetical protein PSYAC_24213 [Pseudomonas syringae pv.
actinidiae str. M302091]
gi|331018942|gb|EGH98998.1| hypothetical protein PLA106_23133 [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 158
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 13/164 (7%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+KIA+F D NLY + + A G +Y L R ++ A+ Y GD +QQ
Sbjct: 1 MKKIAVFADVQNLYYTVRQAYGCHFNYAALWADISKRGEIVHAFAYAIDRGDSKQQQ--- 57
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF V K + ++ K DV + +D + + ++ +V+ SGDG
Sbjct: 58 --FQQILRNLGFTVRLKPYIQRSDGS----AKGDWDVGITIDIMDFAPQVDEVVLASGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
F L+ + K + + P + ++ L R A ++ +
Sbjct: 112 DFDMLLDRVISK---HGVEAVAYGVPGLTANSLIRAASRYVPIE 152
>gi|146284019|ref|YP_001174172.1| hypothetical protein PST_3707 [Pseudomonas stutzeri A1501]
gi|145572224|gb|ABP81330.1| conserved hypothetical protein [Pseudomonas stutzeri A1501]
Length = 197
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 43/163 (26%), Positives = 70/163 (42%), Gaps = 14/163 (8%)
Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
+KIALF D NLY + + A G +Y L R ++ AY Y GDP QQ
Sbjct: 41 KKIALFADVQNLYYTVRQAHGCHFNYSALWADVSRRGTIVEAYAYAIERGDPRQQQ---- 96
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
L GF V K + ++ K DV + +D + + ++ +V+ SGDG
Sbjct: 97 -FQQILRKLGFTVKLKPYIQRSDGS----AKGDWDVGITIDVLDAAARVDEVVLASGDGD 151
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
F L+ ++ + +T P + + L R A ++ +
Sbjct: 152 FDLLLERVRAGGAE----ATAYGVPGLTAQSLIRAATRYVPVE 190
>gi|261253046|ref|ZP_05945619.1| hypothetical protein VIA_003071 [Vibrio orientalis CIP 102891]
gi|260936437|gb|EEX92426.1| hypothetical protein VIA_003071 [Vibrio orientalis CIP 102891]
Length = 160
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 42/166 (25%), Positives = 74/166 (44%), Gaps = 15/166 (9%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
E +A+F+D N+Y +++ + DY + + +A Y DP+Q+
Sbjct: 1 METVAIFVDVQNIYYTTRDKYRANFDYNQFWYIATEGKQIEQANAYAISSHDPKQR--QF 58
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
H +L + GF V K + + K DV +A+D FE +E ++ +++ SGDG
Sbjct: 59 HHILRGI---GFNVNLKPFIQRMDGS----AKGDWDVGIALDVFEAAEKVDRVILLSGDG 111
Query: 124 CFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
F LV +Q K KV + P + + L +D F+ +
Sbjct: 112 DFEILVQRIQEKFNTKVDV----YGVPGLTAQSLIDASDRFIPIDE 153
>gi|54308491|ref|YP_129511.1| hypothetical protein PBPRA1298 [Photobacterium profundum SS9]
gi|46912920|emb|CAG19709.1| conserved hypothetical protein [Photobacterium profundum SS9]
Length = 159
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 69/166 (41%), Gaps = 15/166 (9%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
EK+A+F+D N+Y + K + DY V+ AY Y GD +Q
Sbjct: 1 MEKVAIFVDVQNIYYTVKDKYKCNFDYNAFWAEATQGREVVAAYAYAIHRGDEKQGQ--- 57
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
+ L GF+V K + ++ K DV + +D E + ++ +++ SGDG
Sbjct: 58 --FQNILRGIGFEVKLKPFIQRSDGS----AKGDWDVGITLDVIEHAADVDRVILLSGDG 111
Query: 124 CFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
F LV +Q K V + P + + L A Y+ ++
Sbjct: 112 DFDLLVDKVQTKYGVDVEV----YGVPGLTATSLINTAHYYREIES 153
>gi|289548415|ref|YP_003473403.1| hypothetical protein Thal_0643 [Thermocrinis albus DSM 14484]
gi|289182032|gb|ADC89276.1| protein of unknown function DUF88 [Thermocrinis albus DSM 14484]
Length = 196
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 43/179 (24%), Positives = 79/179 (44%), Gaps = 17/179 (9%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE------- 57
E++ +FIDG+NL+ + + L IDY KL++ R ++RAY+Y V + +
Sbjct: 1 MERVVIFIDGSNLFHAIRYLNIKIDYSKLVEFLREDRKLVRAYFYGAVPQERDVKRNTPE 60
Query: 58 -QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLE 114
+ L+ L G +V ++ + ++ +D+ LA D + +
Sbjct: 61 WESLLRQRRFLEELSLMGIKVKTAPLRKLPTG---EYLEKEVDIMLATDMLSMAYMNVYD 117
Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
++ SGD F+ V +QR K+V S + +S LR+ D F+ L +
Sbjct: 118 TAILVSGDSDFSYTVEEVQRIGKRVENASFRKT----SSYLLRKICDRFILLDDYVDRF 172
>gi|90408478|ref|ZP_01216637.1| hypothetical protein PCNPT3_03246 [Psychromonas sp. CNPT3]
gi|90310410|gb|EAS38536.1| hypothetical protein PCNPT3_03246 [Psychromonas sp. CNPT3]
Length = 157
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 38/160 (23%), Positives = 70/160 (43%), Gaps = 13/160 (8%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+KIA+F D N+Y +S+ A +YRKL + + + + A+ Y GD +Q
Sbjct: 1 MKKIAIFADVQNIYYTSRDAYKKSFNYRKLWQQIKEQGDICYAFAYAIDKGDRQQ----- 55
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
D L + GF++ K + + K DV + +D + + ++ +++ SGDG
Sbjct: 56 QKFQDVLRHLGFEIKLKPYIQRCDGS----AKGDWDVGITIDIMQIAPRVDCIILLSGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163
F L+ + K+ + + V P + L F
Sbjct: 112 DFAILLETV---NKRDKVETQVYGVPKYTAKALIDSCSVF 148
>gi|229592764|ref|YP_002874883.1| hypothetical protein PFLU5385 [Pseudomonas fluorescens SBW25]
gi|229364630|emb|CAY52542.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
Length = 158
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 13/164 (7%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+KIA+F D NLY + + A G +Y L SR ++ AY Y GD +QQ
Sbjct: 1 MKKIAVFADVQNLYYTVRQAYGCHFNYAALWADISSRGQIVEAYAYAIDRGDSKQQQ--- 57
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF V K + ++ K DV + +D + ++ ++ +V+ SGDG
Sbjct: 58 --FQQILRNLGFTVKLKPYIQRSDGS----AKGDWDVGITIDIMDAADHVDEIVLASGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
F L+ + K + + P + ++ L R A ++ +
Sbjct: 112 DFDMLLDRIINK---HGVEAVAYGVPGLTANSLIRAASRYVPIE 152
>gi|15789664|ref|NP_279488.1| hypothetical protein VNG0419C [Halobacterium sp. NRC-1]
gi|169235378|ref|YP_001688578.1| hypothetical protein OE1626F [Halobacterium salinarum R1]
gi|10580028|gb|AAG18968.1| conserved hypothetical protein [Halobacterium sp. NRC-1]
gi|167726444|emb|CAP13229.1| conserved hypothetical protein [Halobacterium salinarum R1]
Length = 165
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 42/171 (24%), Positives = 77/171 (45%), Gaps = 14/171 (8%)
Query: 2 FDPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
P +++A+ D NLY S+++ +IDY LL + RA Y ++
Sbjct: 4 LQPAQRVAVLADSQNLYHSAQSVYSQNIDYAALLDKGVQDRELTRAIAYVIRAQSEDED- 62
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
D L GF+ K K F + K+ DV +++DA ++ ++ +V+ +
Sbjct: 63 ----RFFDALRDIGFETKIKAIKTFGDGS----KKADWDVGMSLDAVSLADHIDTIVLCT 114
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
GDG F+ L L+ + +V +++ A+ +L AD F+DL+
Sbjct: 115 GDGDFSRLCRHLRHEGVRVEVMAF----EESAATELVDAADSFVDLSERTE 161
>gi|104783731|ref|YP_610229.1| hypothetical protein PSEEN4789 [Pseudomonas entomophila L48]
gi|95112718|emb|CAK17446.1| conserved hypothetical protein [Pseudomonas entomophila L48]
Length = 167
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 45/172 (26%), Positives = 73/172 (42%), Gaps = 17/172 (9%)
Query: 1 MFDPR----EKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGD 55
M+ R +KIALF D NLY + + + G +Y L ++ A Y GD
Sbjct: 1 MYSTRCPGLKKIALFADVQNLYYTVRQVHGCHFNYTTLWAEVSREGQIVEAVAYAIDRGD 60
Query: 56 PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEH 115
+QQ L GF+V K + + K DV + +D E +E ++
Sbjct: 61 SKQQQ-----FQQILRNLGFEVRLKPYIQRADGS----AKGDWDVGITLDVIEAAERVDQ 111
Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
+V+ SGDG F L+ R K+ + + V P + + L R A ++ +
Sbjct: 112 VVLASGDGDFDLLLE---RAAKRHGVETVVYGVPGLTALSLIRSASRYVPIE 160
>gi|312963199|ref|ZP_07777683.1| protein of unknown function DUF88 [Pseudomonas fluorescens WH6]
gi|311282465|gb|EFQ61062.1| protein of unknown function DUF88 [Pseudomonas fluorescens WH6]
Length = 158
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 41/164 (25%), Positives = 71/164 (43%), Gaps = 13/164 (7%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+KIA+F D NLY + + A G +Y L +R ++ AY Y GD +QQ
Sbjct: 1 MKKIAVFADVQNLYYTVRQAYGCHFNYAALWADISARGQIVEAYAYAIDRGDSKQQQ--- 57
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF V K + + K DV + +D + ++ ++ +V+ SGDG
Sbjct: 58 --FQQILRNLGFTVKLKPYIQRADGS----AKGDWDVGITLDIMDAADHVDEVVLASGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
F L+ + K + + P + ++ L R A ++ +
Sbjct: 112 DFDMLLERIIHK---HGVHAVAYGVPGLTANSLIRAASRYVPIE 152
>gi|28871798|ref|NP_794417.1| hypothetical protein PSPTO_4666 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|28855050|gb|AAO58112.1| conserved protein of unknown function [Pseudomonas syringae pv.
tomato str. DC3000]
Length = 158
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 13/164 (7%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+KIA+F D NLY + + A G +Y L R ++ A+ Y GD +QQ
Sbjct: 1 MKKIAVFADVQNLYYTVRQAYGCHFNYAALWADISKRGEIVHAFAYAIDRGDSKQQQ--- 57
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF V K + ++ K DV + +D + + ++ +V+ SGDG
Sbjct: 58 --FQQILRNLGFTVRLKPYIQRSDGS----AKGEWDVGITIDIMDFAPQVDEVVLASGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
F L+ + K + + P + ++ L R A ++ +
Sbjct: 112 DFDMLLDRVISK---HGVEAVAYGVPGLTANSLIRAASRYVPIE 152
>gi|289627587|ref|ZP_06460541.1| hypothetical protein PsyrpaN_21062 [Pseudomonas syringae pv.
aesculi str. NCPPB3681]
gi|289649838|ref|ZP_06481181.1| hypothetical protein Psyrpa2_19118 [Pseudomonas syringae pv.
aesculi str. 2250]
gi|330870428|gb|EGH05137.1| hypothetical protein PSYAE_24882 [Pseudomonas syringae pv. aesculi
str. 0893_23]
Length = 158
Score = 154 bits (391), Expect = 3e-36, Method: Composition-based stats.
Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 13/164 (7%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+KIA+F D NLY + + A G +Y L R ++ A+ Y GD +QQ
Sbjct: 1 MKKIAVFADVQNLYYTVRQAHGCHFNYAALWADISKRGEIVHAFAYAIDRGDSKQQQ--- 57
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF V K + ++ K DV + +D + + ++ +V+ SGDG
Sbjct: 58 --FQQILRNLGFTVRLKPYIQRSDGS----AKGDWDVGITIDIMDFAPQVDEVVLASGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
F L+ + K + + P + ++ L R A ++ +
Sbjct: 112 DFDMLLERVISK---HDVEAVAYGVPGLTANSLIRAASRYVPIE 152
>gi|55377125|ref|YP_134975.1| hypothetical protein rrnAC0208 [Haloarcula marismortui ATCC 43049]
gi|55229850|gb|AAV45269.1| unknown [Haloarcula marismortui ATCC 43049]
Length = 165
Score = 154 bits (391), Expect = 4e-36, Method: Composition-based stats.
Identities = 39/167 (23%), Positives = 76/167 (45%), Gaps = 14/167 (8%)
Query: 3 DPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
P +++A+ D NLY ++++ +IDY LL+ + RA Y PE++
Sbjct: 5 QPGQRVAVLADAQNLYHTARSLYSRNIDYEALLEEAVDGRELTRAIAYVIRADSPEEE-- 62
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
+ L GF+ K K F + K+ DV +++DA + ++ +V+ +G
Sbjct: 63 ---SFFEALVDIGFETRIKDIKTFQDGS----KKADWDVGMSLDAVSLANHVDTVVLCTG 115
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
DG F + L+ + +V + +S+ L+ D F+D++
Sbjct: 116 DGDFARVCRYLRHEGCRVEAMGF----EESSSEDLKAAVDGFIDMSD 158
>gi|237801480|ref|ZP_04589941.1| hypothetical protein POR16_21831 [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331024339|gb|EGI04396.1| hypothetical protein POR16_21831 [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 158
Score = 154 bits (391), Expect = 4e-36, Method: Composition-based stats.
Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 13/164 (7%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+KIA+F D NLY + + A G +Y L R ++ A+ Y GD +QQ
Sbjct: 1 MKKIAVFADVQNLYYTVRQAHGCHFNYAALWADISKRGEIVHAFAYAIDRGDSKQQQ--- 57
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF V K + ++ K DV + +D + + ++ +V+ SGDG
Sbjct: 58 --FQQILRNLGFTVRLKPYIQRSDGS----AKGDWDVGITIDIMDFAPQVDEVVLASGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
F L+ + K + + P + ++ L R A ++ +
Sbjct: 112 DFDMLLDRVISK---HGVAAVAYGVPGLTANSLIRAASRYVPIE 152
>gi|225850534|ref|YP_002730768.1| RtsE [Persephonella marina EX-H1]
gi|225645811|gb|ACO03997.1| RtsE [Persephonella marina EX-H1]
Length = 179
Score = 154 bits (391), Expect = 4e-36, Method: Composition-based stats.
Identities = 47/177 (26%), Positives = 84/177 (47%), Gaps = 14/177 (7%)
Query: 2 FDPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+++A+F+D NLY S++ + +++ +L + +++RA Y + +Q
Sbjct: 10 LYKNQRVAVFLDIQNLYYSARDSFNRKVNFESVLDKVLNGRVLVRAIAYLVKLQGVDQ-- 67
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFT--ENCG--RKRVKSSMDVELAVDAFEQSEGLEHL 116
++ L + G+QV K K F + G +K+ D+ +A+DA +E ++
Sbjct: 68 ---KGFINTLKHIGYQVRVKEPKIFKRLDEYGNLWTTIKADWDMGIAMDAISLAEKIDVA 124
Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
V+ SGDG F LV L K KV I + A+ +L AD F+DL E+
Sbjct: 125 VLASGDGDFADLVRYLHTKGVKVEIAAF----KQTAAKELIEVADEFIDLTAFGEEV 177
>gi|328950408|ref|YP_004367743.1| Domain of unknown function DUF88 [Marinithermus hydrothermalis DSM
14884]
gi|328450732|gb|AEB11633.1| Domain of unknown function DUF88 [Marinithermus hydrothermalis DSM
14884]
Length = 186
Score = 154 bits (391), Expect = 4e-36, Method: Composition-based stats.
Identities = 35/172 (20%), Positives = 73/172 (42%), Gaps = 10/172 (5%)
Query: 2 FDPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ P +++ +F+D NLY S++ +++ LL + ++RA Y +
Sbjct: 7 WHPTQRVGVFVDTQNLYHSARDYYERTVNFASLLNYAVAGRQLVRATAYVVERDGDTSAW 66
Query: 61 SPLHPLLDWLHYNGFQVVAKVAK-EFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119
P + L G++V + T + G+ + + D+ +A D L+ +V+
Sbjct: 67 ----PFIYKLSTIGYRVRRMTLQLHHTTDDGKPIYEGNWDMGIAADMVRLMHTLDVVVLG 122
Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
SGDG F ++ L + +V +V+ + +L D F L + +
Sbjct: 123 SGDGDFVEILEVLMERGIRVEVVAF----KETTAQKLIDAVDKFTHLPDIPD 170
>gi|87302148|ref|ZP_01084973.1| hypothetical protein WH5701_08104 [Synechococcus sp. WH 5701]
gi|87283073|gb|EAQ75029.1| hypothetical protein WH5701_08104 [Synechococcus sp. WH 5701]
Length = 260
Score = 154 bits (390), Expect = 5e-36, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 83/169 (49%), Gaps = 12/169 (7%)
Query: 10 LFIDGANLYASSKALGFDIDYRKLLKAFRS--RAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
+ +DG ++ + + LG+ D R+LL+ + + AY+YT + +Q P
Sbjct: 54 VIVDGHGMFYAQQKLGWFFDPRRLLELATADPGVELDGAYWYTGLKDPADQ-----RPFR 108
Query: 68 DWLHYNGFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126
D L G+ V +K +EF + R+ ++++DVE+ +D + L+ + + SG
Sbjct: 109 DALTSLGYTVRSKPLREFGADPEHRQFARANLDVEICLDLMMVAHRLDEVWLLSGSRDLE 168
Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
LV L+ K ++T++ + M +LR D F+DLA + ++ +
Sbjct: 169 RLVETLRAKGIRITLL----NADGMVPRELRNAVDVFLDLAGRRKQLEK 213
>gi|313679721|ref|YP_004057460.1| hypothetical protein Ocepr_0830 [Oceanithermus profundus DSM 14977]
gi|313152436|gb|ADR36287.1| protein of unknown function DUF88 [Oceanithermus profundus DSM
14977]
Length = 184
Score = 154 bits (390), Expect = 5e-36, Method: Composition-based stats.
Identities = 36/172 (20%), Positives = 75/172 (43%), Gaps = 10/172 (5%)
Query: 2 FDPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
++ +++ LF+D NLY S++ +++ LLK ++RA Y + +
Sbjct: 7 WNAMQRVGLFVDTQNLYHSARDYYERTVNFESLLKRAVQGRQLVRATAYVVERENDTSAW 66
Query: 61 SPLHPLLDWLHYNGFQVV-AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119
P + L G++V ++ T + G+ + + D+ +A D + L+ +V+
Sbjct: 67 ----PFIYKLSTMGYRVRRMNLSVHHTTDEGKPIYEGNWDMGIAADMVRLMDALDVVVLG 122
Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
SGDG F ++ L K +V +++ + +L D F L +
Sbjct: 123 SGDGDFVDILEVLMEKGIRVEVIAF----KETTAQKLIDAVDQFTHLPEIDE 170
>gi|330811889|ref|YP_004356351.1| hypothetical protein PSEBR_a4925 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327379997|gb|AEA71347.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 159
Score = 154 bits (390), Expect = 5e-36, Method: Composition-based stats.
Identities = 41/164 (25%), Positives = 73/164 (44%), Gaps = 13/164 (7%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+KIA+F D NLY + + A G +Y L + ++ AY Y GD +QQ
Sbjct: 1 MKKIAVFADVQNLYYTVRQAYGCHFNYAALWADVSKQGQIVEAYAYAIDRGDSKQQQ--- 57
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF V K + ++ K DV + +D + ++ ++ +V+ SGDG
Sbjct: 58 --FQQILRNLGFIVKLKPYIQRSDGS----AKGDWDVGITLDIMDAADHVDEVVLASGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
F L+ R ++K + + P + ++ L R A ++ +
Sbjct: 112 DFDMLLE---RIIQKHGVQAVAYGVPGLTANSLIRAASRYVPIE 152
>gi|46199000|ref|YP_004667.1| hypothetical protein TTC0692 [Thermus thermophilus HB27]
gi|46196624|gb|AAS81040.1| hypothetical conserved protein [Thermus thermophilus HB27]
Length = 180
Score = 154 bits (389), Expect = 7e-36, Method: Composition-based stats.
Identities = 35/182 (19%), Positives = 74/182 (40%), Gaps = 11/182 (6%)
Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
+++ +F+D NLY S++ ++++ LL+ ++RA Y +
Sbjct: 8 YQEQRVGVFVDTQNLYHSARDYYERNVNFESLLRFAVGGRRLVRATAYVVEKEGDTSAW- 66
Query: 62 PLHPLLDWLHYNGFQVVAK-VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
P + L G++V + + T GR + D+ +A D L+ +V+ S
Sbjct: 67 ---PFIYKLSTIGYKVRRMYLTVKETGEGGRPIYSGNWDMGIAADMVRLMPYLDVVVLGS 123
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG F ++ L + +V +++ + +L D F L + +P
Sbjct: 124 GDGDFVEILEVLMERGIRVEVIAF----RETTAQRLIDAVDRFTHLPEIPGAFM-EPRSP 178
Query: 181 KK 182
++
Sbjct: 179 ER 180
>gi|89072963|ref|ZP_01159510.1| hypothetical protein SKA34_12125 [Photobacterium sp. SKA34]
gi|90578998|ref|ZP_01234808.1| hypothetical protein VAS14_04813 [Vibrio angustum S14]
gi|89051181|gb|EAR56637.1| hypothetical protein SKA34_12125 [Photobacterium sp. SKA34]
gi|90439831|gb|EAS65012.1| hypothetical protein VAS14_04813 [Vibrio angustum S14]
Length = 159
Score = 154 bits (389), Expect = 7e-36, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 15/166 (9%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
EK+A+F+D N+Y + K + DY +I AY Y GD +Q
Sbjct: 1 MEKVAIFVDVQNIYYTVKEKYRANFDYNAFWAEVSQDREIIAAYAYAIHKGDEKQ----- 55
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
+ L GF+V K + ++ K DV + +D E ++ + +++ SGDG
Sbjct: 56 RQFQNILRAIGFEVKLKPFIQRSDGS----AKGDWDVGITLDVIEHAQDADRIILLSGDG 111
Query: 124 CFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
F LV +Q K KV + P + + L A ++ ++
Sbjct: 112 DFDLLVDKVQTKYNTKVEV----YGVPGLTATSLINTATHYREIED 153
>gi|260769223|ref|ZP_05878156.1| hypothetical protein VFA_002281 [Vibrio furnissii CIP 102972]
gi|260614561|gb|EEX39747.1| hypothetical protein VFA_002281 [Vibrio furnissii CIP 102972]
gi|315181763|gb|ADT88676.1| hypothetical protein vfu_B00438 [Vibrio furnissii NCTC 11218]
Length = 157
Score = 153 bits (388), Expect = 8e-36, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 72/165 (43%), Gaps = 15/165 (9%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
E IA+ +D N+Y + K +Y + + V++A Y D Q+
Sbjct: 1 METIAILVDVQNVYYTCKERYQRHFNYNHFWQQVTNGRHVVKANAYAIASNDSRQR--QF 58
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
H +L + GF+V+ K + ++ K DV + +DA E + ++ +V+ SGDG
Sbjct: 59 HHILRGI---GFEVMLKPYIQRSDGS----AKGDWDVGITLDAIELAPDVDTVVLVSGDG 111
Query: 124 CFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
F L +Q K K+V + P + + L A+ ++ +
Sbjct: 112 DFDILAKRIQDKYGKQVEV----YGVPGLTARSLVDAANRYVTIE 152
>gi|288817663|ref|YP_003432010.1| hypothetical protein HTH_0343 [Hydrogenobacter thermophilus TK-6]
gi|288787062|dbj|BAI68809.1| hypothetical protein HTH_0343 [Hydrogenobacter thermophilus TK-6]
gi|308751261|gb|ADO44744.1| protein of unknown function DUF88 [Hydrogenobacter thermophilus
TK-6]
Length = 199
Score = 153 bits (388), Expect = 9e-36, Method: Composition-based stats.
Identities = 46/179 (25%), Positives = 79/179 (44%), Gaps = 17/179 (9%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE------- 57
E++ +FIDG+NL+ + + L IDY+KL+ +IRAY+Y + + +
Sbjct: 3 DERVIIFIDGSNLFHAIRYLNIRIDYQKLVDFLTEGRRLIRAYFYGAMPHEKDVKKNTPE 62
Query: 58 -QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLE 114
+ L+ L G +V K+ + V+ +D+ LA D + +
Sbjct: 63 WESLLRQKRFLEELSLMGIKVKTAHLKKLPSG---EYVEKEVDIMLATDMLSMAYMNTYD 119
Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
V+ SGD ++ V +QR KKV S + +S QLR+ D F+ L +
Sbjct: 120 TAVLISGDSDYSYTVEEVQRIGKKVENASFKRT----SSYQLRKACDRFILLDDYLDRF 174
>gi|146308745|ref|YP_001189210.1| hypothetical protein Pmen_3730 [Pseudomonas mendocina ymp]
gi|145576946|gb|ABP86478.1| protein of unknown function DUF88 [Pseudomonas mendocina ymp]
Length = 159
Score = 153 bits (388), Expect = 9e-36, Method: Composition-based stats.
Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 14/164 (8%)
Query: 5 REKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+KIA+F D NLY + + + G DY L R ++ AY Y GD +QQ
Sbjct: 1 MKKIAVFADVQNLYYTVRQVHGCHFDYSVLWAEVSRRGVIAEAYAYAIDRGDAKQQQ--- 57
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF V K + + K DV + +D + E ++ +V+ SGDG
Sbjct: 58 --FQQILRKLGFTVKLKPYIQRADGS----AKGDWDVGITIDVLDALERVDEIVLASGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
F L+ ++ + + + P + + L R A ++ +
Sbjct: 112 DFDLLLERVRSRG----VEAIAFGVPGLTAQSLIRAASLYVPIE 151
>gi|163785396|ref|ZP_02180018.1| hypothetical protein HG1285_09231 [Hydrogenivirga sp. 128-5-R1-1]
gi|159879334|gb|EDP73216.1| hypothetical protein HG1285_09231 [Hydrogenivirga sp. 128-5-R1-1]
Length = 186
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 15/174 (8%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-----EQQ 59
EKIA+FID N++ +S I+Y+KL++ R ++RAY+YT V ++Q
Sbjct: 21 DEKIAIFIDAGNMFHASNYYKIKINYKKLVEFLRRDRWLLRAYFYTGVPTQDLDKSLKEQ 80
Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLV 117
+ L+ L G +V K+ E ++ +DV LA D + + +
Sbjct: 81 WKKQKGFLNELQNLGIKVKTMPLKKTPEG----FIEKGVDVLLATDMVSLAFRNAYDTAI 136
Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
+ SGD + +V +Q K+V S + +S +LR+ D F+ L +
Sbjct: 137 LVSGDSDYVPVVEEIQELGKRVENASFKRT----SSFELRKVCDRFILLDNFMD 186
>gi|119476672|ref|ZP_01616982.1| hypothetical protein GP2143_03548 [marine gamma proteobacterium
HTCC2143]
gi|119449928|gb|EAW31164.1| hypothetical protein GP2143_03548 [marine gamma proteobacterium
HTCC2143]
Length = 158
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 15/165 (9%)
Query: 5 REKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
EK+A+F+D N+Y +++ + DY K S V++A Y T GD +Q
Sbjct: 1 MEKVAIFVDVQNVYYTTRQTFRKNFDYNKFWLKACSSREVVKAIAYATDRGDQKQ----- 55
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
H + L GF+V K + ++ K DV + +D E ++ + +++ SGDG
Sbjct: 56 HEFQNILRAIGFEVKLKPFIQRSDGS----AKGDWDVGITIDIMECADDVAVVILVSGDG 111
Query: 124 CFTTLVAALQ-RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
F L ++ + K+V + + + L A F+ +
Sbjct: 112 DFDLLAQKIRVERGKRVEV----YGVAQLTAKSLINAATEFIPID 152
>gi|239996208|ref|ZP_04716732.1| hypothetical protein AmacA2_17270 [Alteromonas macleodii ATCC
27126]
Length = 153
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 38/164 (23%), Positives = 74/164 (45%), Gaps = 14/164 (8%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
K + +D N+Y + + A + +Y + + + A+ Y GD +Q
Sbjct: 1 MNKALVLVDVQNVYYTCRQAYKRNFNYNQFWRELTYNLDIAHAFAYAIDRGDSKQ----- 55
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
+ L GF+V K + + K DV + VDA E ++ ++ +++ SGDG
Sbjct: 56 REFQNILRAIGFEVKLKPFIQRADGS----AKGDWDVGITVDALEHADDVDEIILVSGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
F LV AL+ K K VT+ P++ ++ +++ A ++ +
Sbjct: 112 DFDILVNALKAKGKTVTV----YGVPALTAESIQKVASKYVPID 151
>gi|288818569|ref|YP_003432917.1| hypothetical protein HTH_1263 [Hydrogenobacter thermophilus TK-6]
gi|288787969|dbj|BAI69716.1| hypothetical protein HTH_1263 [Hydrogenobacter thermophilus TK-6]
gi|308752160|gb|ADO45643.1| protein of unknown function DUF88 [Hydrogenobacter thermophilus
TK-6]
Length = 165
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 13/176 (7%)
Query: 5 REKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+++ +FIDGAN Y K L ID KL++ F+ + ++Y E+Q
Sbjct: 2 KKRAGIFIDGANFYFIQKHILHQKIDLIKLVEYFKRDYTIYNTFFYLAYREGDEKQ---- 57
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
+ L ++G VV K K+ + K S+DV++A+D + + V+ SGD
Sbjct: 58 ENFIKLLAFSGITVVKKPIKQLKDG----TYKGSLDVDMALDVLLTKDNYDVAVLCSGDS 113
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
F LV L+ K+V VST +S +L D ++DLA + I + E
Sbjct: 114 DFERLVWVLRDFSKEVICVST----KESSSVELVNACDRYIDLADIMPYIKLEERE 165
>gi|55981026|ref|YP_144323.1| hypothetical protein TTHA1057 [Thermus thermophilus HB8]
gi|55772439|dbj|BAD70880.1| conserved hypothetical protein [Thermus thermophilus HB8]
Length = 180
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 34/181 (18%), Positives = 73/181 (40%), Gaps = 10/181 (5%)
Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
+++ +F+D NLY S++ ++++ LL+ ++RA Y +
Sbjct: 8 YQEQRVGVFVDTQNLYHSARDYYERNVNFESLLRFAVGGRRLVRATAYVVEKEGDTSAW- 66
Query: 62 PLHPLLDWLHYNGFQVVAK-VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
P + L G++V + + T GR + D+ +A D L+ +V+ S
Sbjct: 67 ---PFIYKLSTIGYKVRRMYLTVKETGEGGRPIYSGNWDMGIAADMVRLMPYLDVVVLGS 123
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG F ++ L + +V +++ + +L D F L + + +
Sbjct: 124 GDGDFVEILEVLMERGIRVEVIAF----RETTAQRLIDAVDRFTHLPEIPGAFMEPKNAE 179
Query: 181 K 181
+
Sbjct: 180 R 180
>gi|313680485|ref|YP_004058224.1| hypothetical protein Ocepr_1598 [Oceanithermus profundus DSM 14977]
gi|313153200|gb|ADR37051.1| protein of unknown function DUF88 [Oceanithermus profundus DSM
14977]
Length = 189
Score = 151 bits (383), Expect = 3e-35, Method: Composition-based stats.
Identities = 38/172 (22%), Positives = 80/172 (46%), Gaps = 16/172 (9%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
+++ALFIDG+ +Y +K +G+++D+RK+++ F S + A+YY + +++
Sbjct: 1 MDRLALFIDGSFVYNCAKRMGWNVDHRKVIEHFPSGFALFNAFYYAPITDWNDER---QQ 57
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
LD L + G+ V ++ + S + +A D + + ++ SG
Sbjct: 58 KFLDALIFMGYSVRSREVRGEA---------PSFEAHIATDLLITAPRWDVALLASGAAQ 108
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
V A++ K+V ++ P + +R D F+DL + + R+
Sbjct: 109 LVPAVEAVRTMGKEVHLL----GIPELVDLDIRSATDRFIDLKEYRELLERE 156
>gi|195953366|ref|YP_002121656.1| protein of unknown function DUF88 [Hydrogenobaculum sp. Y04AAS1]
gi|195932978|gb|ACG57678.1| protein of unknown function DUF88 [Hydrogenobaculum sp. Y04AAS1]
Length = 195
Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats.
Identities = 46/184 (25%), Positives = 85/184 (46%), Gaps = 15/184 (8%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE------Q 58
+EK+ +FIDG+N++ K F +DY KL++ ++RAY+Y+ + D + +
Sbjct: 3 KEKLVIFIDGSNVFHGLKNETFRLDYLKLIEFLTGDRYLVRAYFYSALPSDKDVDKQSKE 62
Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHL 116
F+ L+ L + G +V ++ + ++ +D+ LA D + +
Sbjct: 63 GFNKQKKFLEDLAFMGIKVKLAKLRKLPDGN---FLEKEVDIMLATDMLSLAYKNAYDSC 119
Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
V+ SGD F+ V A+Q K+V + + +S LRR D F+ L ++
Sbjct: 120 VLVSGDSDFSYTVEAVQFLGKRVENATFKKT----SSYSLRRLCDKFIYLDDHLDKFLLK 175
Query: 177 PDED 180
P E
Sbjct: 176 PKEP 179
>gi|219883176|ref|YP_002478338.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7425]
gi|219867301|gb|ACL47639.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7425]
Length = 356
Score = 151 bits (382), Expect = 4e-35, Method: Composition-based stats.
Identities = 43/165 (26%), Positives = 77/165 (46%), Gaps = 12/165 (7%)
Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
+A+ +D AN+Y LG ++Y +L+ ++ + ++YT + L
Sbjct: 188 LAILVDAANIYHCGNELGVKVNYDQLIPGLQAGFESSQVWFYTGLKSGD----FRQQRFL 243
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTT 127
L G+QVV K + + K+++DVELA++ + +E +++ SGDG
Sbjct: 244 ASLRQQGYQVVTKRVVRHEDG----KEKANLDVELALEMVKLAERYSDILLLSGDGDLAC 299
Query: 128 LVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
V A ++K +V ++S S S L R AD F DL + +
Sbjct: 300 AVRAARQKGARVEVISF----RSRTSQDLIRAADDFRDLTDMVDR 340
>gi|257051312|ref|YP_003129145.1| protein of unknown function DUF88 [Halorhabdus utahensis DSM 12940]
gi|256690075|gb|ACV10412.1| protein of unknown function DUF88 [Halorhabdus utahensis DSM 12940]
Length = 165
Score = 150 bits (380), Expect = 6e-35, Method: Composition-based stats.
Identities = 42/167 (25%), Positives = 79/167 (47%), Gaps = 14/167 (8%)
Query: 3 DPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
P +++A+ D NLY ++++ +IDY +LL A + RA Y +++
Sbjct: 5 HPGQRVAVLADSQNLYHTAQSLYQQNIDYGELLDAAVRDRQLTRAIAYVIRADADDEE-- 62
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
D L GF+ AK K F + K+ DV +++DA + ++ + + +G
Sbjct: 63 ---RFFDALEDIGFETKAKDIKTFADGS----KKADWDVGMSLDAVTLAPHVDTIALCTG 115
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
DG F LV ++ + +V ++S S S++L A+ + DL+
Sbjct: 116 DGDFARLVTHVRHEGVRVEVLSFGES----TSEELLDVAEDYTDLSE 158
>gi|15605927|ref|NP_213304.1| hypothetical protein aq_430 [Aquifex aeolicus VF5]
gi|2983099|gb|AAC06705.1| hypothetical protein aq_430 [Aquifex aeolicus VF5]
Length = 183
Score = 150 bits (380), Expect = 6e-35, Method: Composition-based stats.
Identities = 45/168 (26%), Positives = 74/168 (44%), Gaps = 13/168 (7%)
Query: 8 IALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
A+F+DG NLY K L ID K + F+ + ++Y + E+Q
Sbjct: 26 AAIFVDGTNLYFIQKNFLNAKIDIVKFVNYFKQFYDIYNTFFYLAYKEEDEKQ----ERF 81
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126
L ++G VV K K+ + +K +DV++A+D + + ++ SGD F
Sbjct: 82 FKLLAFSGITVVKKPVKQLKDGS----LKGDVDVDIAIDMLLTKDNYDTAILCSGDSDFE 137
Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
LV L+ K+V VST +S +L D ++DL + I
Sbjct: 138 RLVYVLRNFGKEVICVST----KESSSIELVNACDRYIDLKEILPFIK 181
>gi|71278570|ref|YP_266902.1| hypothetical protein CPS_0134 [Colwellia psychrerythraea 34H]
gi|71144310|gb|AAZ24783.1| conserved hypothetical protein [Colwellia psychrerythraea 34H]
Length = 157
Score = 150 bits (380), Expect = 7e-35, Method: Composition-based stats.
Identities = 37/158 (23%), Positives = 69/158 (43%), Gaps = 13/158 (8%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+KIA+F+D N+Y +++ +YR L + ++ + A Y D +Q
Sbjct: 1 MKKIAVFVDVQNIYYTTRDTYAKQFNYRLLWQELMAQGEITIANAYAIQRSDDQQ----- 55
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
H L + GF V K + ++ K DV + +D E + ++ +++ SGDG
Sbjct: 56 HKFQKALKHIGFDVKLKPYIQRSDGS----AKGDWDVGITIDIMEAAAEVDTVILLSGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
F L+ ++ K + + V S + + L AD
Sbjct: 112 DFDLLLRKVREK---YGVSTEVYSVEKLTAKSLVEAAD 146
>gi|114562206|ref|YP_749719.1| hypothetical protein Sfri_1028 [Shewanella frigidimarina NCIMB 400]
gi|114333499|gb|ABI70881.1| protein of unknown function DUF88 [Shewanella frigidimarina NCIMB
400]
Length = 157
Score = 150 bits (380), Expect = 7e-35, Method: Composition-based stats.
Identities = 41/161 (25%), Positives = 70/161 (43%), Gaps = 13/161 (8%)
Query: 8 IALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
+A+F+D N+Y + K G +YR L K ++ + A Y D Q
Sbjct: 4 LAVFVDVQNIYYTCKQGFGRSFNYRALYKHLSAQGCISHAIAYAIAPADDGQV-----KF 58
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126
D L + GF V K + ++ K DV + +D E + ++ +++ SGDG F
Sbjct: 59 QDALKHIGFTVKTKPYIQRSDGS----AKGDWDVGITIDMLEIAPTVDEVILLSGDGDFD 114
Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
L L++ + T + VLS + + L QA +F +
Sbjct: 115 LL---LKKINQTTTCYTHVLSVERLTAKSLTDQAQHFTAID 152
>gi|163782630|ref|ZP_02177627.1| hypothetical protein HG1285_17140 [Hydrogenivirga sp. 128-5-R1-1]
gi|159882203|gb|EDP75710.1| hypothetical protein HG1285_17140 [Hydrogenivirga sp. 128-5-R1-1]
Length = 198
Score = 150 bits (380), Expect = 8e-35, Method: Composition-based stats.
Identities = 45/181 (24%), Positives = 78/181 (43%), Gaps = 17/181 (9%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE----- 57
E++ +FIDG+NL+ + L IDY +L+ R ++RAY+YT V D +
Sbjct: 1 MNEERLMIFIDGSNLFHGIRYLNIKIDYGRLVDFLRESRRLVRAYFYTAVPQDRDVKKGT 60
Query: 58 ---QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EG 112
+ LD L +G +V ++ + ++ +D+ LA D +
Sbjct: 61 PEWESLIRQKRFLDELALSGIKVKLAKLRKLPSG---EFIEKEVDIMLATDMLSLAFQNA 117
Query: 113 LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
+ V+ SGD F V +QR K+V + + +S LR+ D F+ L +
Sbjct: 118 YDTAVLVSGDSDFIYTVEEIQRIGKRVENATFKKT----SSYNLRKTCDRFVLLDNFLDR 173
Query: 173 I 173
Sbjct: 174 F 174
>gi|108805593|ref|YP_645530.1| hypothetical protein Rxyl_2805 [Rubrobacter xylanophilus DSM 9941]
gi|108766836|gb|ABG05718.1| protein of unknown function DUF88 [Rubrobacter xylanophilus DSM
9941]
Length = 189
Score = 150 bits (379), Expect = 9e-35, Method: Composition-based stats.
Identities = 53/185 (28%), Positives = 87/185 (47%), Gaps = 12/185 (6%)
Query: 4 PREKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGD-PEQQFS 61
E++A+F+DGANLY S K+ G +DY +LL+A + ++RA +Y + EQ S
Sbjct: 5 SDERVAVFVDGANLYHSIKSYYGGVLDYGRLLEAAVAGRRLLRATFYLVEKQEADEQVAS 64
Query: 62 PLHPLLDWLHYNGFQVVAKVA-KEFTENCGRKRV---KSSMDVELAVDAFEQSEGLEHLV 117
+ L+ G++V +K T G +RV K DV + VD ++ + V
Sbjct: 65 STRSFVYNLNRFGYKVRSKPLTVHETTTPGVERVVSHKGDWDVGIVVDMIRLADHADTYV 124
Query: 118 IFSGDGCFTTLVAALQ-RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI-AR 175
+ SGDG + +V LQ + +V ++S + L D + DL + + R
Sbjct: 125 LVSGDGDYVEVVDYLQTERGLRVEVISAAQC----TAQALFDVCDRYTDLGEIPDLFRER 180
Query: 176 DPDED 180
P D
Sbjct: 181 GPLRD 185
>gi|220910751|ref|YP_002486061.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7425]
gi|219867523|gb|ACL47860.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7425]
Length = 343
Score = 150 bits (379), Expect = 9e-35, Method: Composition-based stats.
Identities = 50/165 (30%), Positives = 80/165 (48%), Gaps = 12/165 (7%)
Query: 9 ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68
A+FID ANL S++ L +DY+K+ + R ++YT +Q LD
Sbjct: 171 AIFIDAANLEYSARDLNLQLDYQKIYRFLTKGMKQPRVFFYTGERPGDARQKKQ----LD 226
Query: 69 WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTL 128
WL G+Q+V K K+++DVELA+D + ++ L V+ SGDG FT
Sbjct: 227 WLTGIGYQLVTKKIVRQPGG----TEKANLDVELALDMYRLADTLSRAVLVSGDGDFTQA 282
Query: 129 VAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
+ L+++ V ++S S S L + A+ ++DL EI
Sbjct: 283 LQLLKQQGIAVDVISF----RSCTSKALIKAANRYIDLEQRTAEI 323
>gi|88859966|ref|ZP_01134605.1| hypothetical protein PTD2_18180 [Pseudoalteromonas tunicata D2]
gi|88817960|gb|EAR27776.1| hypothetical protein PTD2_18180 [Pseudoalteromonas tunicata D2]
Length = 157
Score = 150 bits (379), Expect = 9e-35, Method: Composition-based stats.
Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 15/158 (9%)
Query: 8 IALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
+A+F+D N+Y + + A + +Y + + V A+ Y D +Q+
Sbjct: 4 LAIFVDVQNVYYTCRQAYQANFNYNQFWREATEGYDVSYAFAYAIGRSDEKQKQ-----F 58
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126
+ L GF++ K + ++ K DV + +D + ++ ++ L++ SGDG F
Sbjct: 59 QNILRAIGFEIKLKPYIQRSDGS----AKGDWDVGITIDMMDYAQSVDKLILVSGDGDFA 114
Query: 127 TLVAALQRKVKK-VTIVSTVLSDPSMASDQLRRQADYF 163
LV +Q K K V + P++ SD L R A +F
Sbjct: 115 MLVDRIQNKYDKPVEV----YGVPTLTSDSLIRSAKHF 148
>gi|26991450|ref|NP_746875.1| hypothetical protein PP_4769 [Pseudomonas putida KT2440]
gi|148549846|ref|YP_001269948.1| hypothetical protein Pput_4644 [Pseudomonas putida F1]
gi|24986525|gb|AAN70339.1|AE016675_9 conserved hypothetical protein [Pseudomonas putida KT2440]
gi|148513904|gb|ABQ80764.1| protein of unknown function DUF88 [Pseudomonas putida F1]
Length = 159
Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 42/165 (25%), Positives = 70/165 (42%), Gaps = 15/165 (9%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+KIALF D NLY + + A G +Y L ++ A Y GD +QQ
Sbjct: 1 MKKIALFADVQNLYYTVRQAHGCHFNYTALWADVSREGQIVEAVAYAIDRGDSKQQQ--- 57
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF+V K + ++ K DV + +D + + ++ +V+ SGDG
Sbjct: 58 --FQQILRNLGFEVRLKPFIQRSDGS----AKGDWDVGITLDVIDAASRVDQVVLASGDG 111
Query: 124 CFTTLVA-ALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
F L+ +QR + + V P + + L R A ++ +
Sbjct: 112 DFDLLLERVIQRHGTE----AVVYGVPGLTALSLIRAATRYVPIE 152
>gi|320334669|ref|YP_004171380.1| hypothetical protein Deima_2072 [Deinococcus maricopensis DSM
21211]
gi|319755958|gb|ADV67715.1| Domain of unknown function DUF88 [Deinococcus maricopensis DSM
21211]
Length = 182
Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 33/167 (19%), Positives = 71/167 (42%), Gaps = 10/167 (5%)
Query: 5 REKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+ ++ +FID NLY S++ +++ +LL+ ++RA Y
Sbjct: 7 KPRVGVFIDTQNLYHSARDLYERTVNFERLLQYATEGRELVRAVSYVVEREGEGTA---- 62
Query: 64 HPLLDWLHYNGFQVVAKVAK-EFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
P + L G++V + T G+ + + D+ + D + L+ +V+ SGD
Sbjct: 63 RPFIYKLSTIGYKVRRMTLQLHHTNEQGKAIWEGNWDMGIVADMTRLLDHLDVIVLGSGD 122
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
G FT +V Q + +V +++ + +L D + + + +
Sbjct: 123 GDFTDMVEVFQERGVRVEVIAF----REHTAQKLVDACDRYTNWSDV 165
>gi|170719838|ref|YP_001747526.1| hypothetical protein PputW619_0652 [Pseudomonas putida W619]
gi|169757841|gb|ACA71157.1| protein of unknown function DUF88 [Pseudomonas putida W619]
Length = 159
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 15/165 (9%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+KIALF D NLY + + A G +Y L ++ A Y GD +QQ
Sbjct: 1 MKKIALFADVQNLYYTVRQAHGCHFNYTALWSEVSREGEIVEAVAYAIDRGDSKQQQ--- 57
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF V K + ++ K DV + +D + + ++ +V+ SGDG
Sbjct: 58 --FQQILRNLGFDVRLKPFIQRSDGS----AKGDWDVGITLDVIDAASRVDQVVLASGDG 111
Query: 124 CFTTLVA-ALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
F L+ +QR + + V P + + L R A ++ +
Sbjct: 112 DFDLLLERVIQRHGAE----AVVYGVPGLTAMSLIRAASRYVPIE 152
>gi|76802672|ref|YP_330767.1| hypothetical protein NP4076A [Natronomonas pharaonis DSM 2160]
gi|76558537|emb|CAI50129.1| conserved hypothetical protein [Natronomonas pharaonis DSM 2160]
Length = 165
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 39/172 (22%), Positives = 75/172 (43%), Gaps = 14/172 (8%)
Query: 3 DPREKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
+++A+ D NLY ++ + + DY +LL A +IRA Y P +Q
Sbjct: 5 HSNQRVAVLADSQNLYHTAHSYYSRNPDYTELLSAAVRDRELIRAIAYVIRADPPTEQE- 63
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
+ L GF+ K K F + K++ D+ + +DA + ++ V+ SG
Sbjct: 64 ----FFEALRDIGFETKIKDIKTFADG----TQKANWDLGMCLDAVTLAPKIDTFVLASG 115
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
DG F L L+ + + + S +++L AD ++D++ ++
Sbjct: 116 DGDFARLCTHLRHEGVRTEVFGFGDS----TAEELIDAADSYVDMSEDEDRF 163
>gi|197335397|ref|YP_002155926.1| hypothetical protein VFMJ11_1205 [Vibrio fischeri MJ11]
gi|197316887|gb|ACH66334.1| conserved hypothetical protein [Vibrio fischeri MJ11]
Length = 157
Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 38/166 (22%), Positives = 68/166 (40%), Gaps = 15/166 (9%)
Query: 5 REKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+ +A+ +D N+Y +++ DY L V+ A Y D +Q+
Sbjct: 1 MKTVAILVDVQNIYYTTRDVYQRHFDYNALWAKVTEGRTVVGANAYAIARSDDKQKQ--- 57
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
+ L GF V K + + K DV + +DA E +E + +V+ SGDG
Sbjct: 58 --FHNILRGIGFDVKLKPFIQRRDGS----AKGDWDVGITLDAIELAEQADIVVLLSGDG 111
Query: 124 CFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
F L+ +Q + K+V + + ++ L AD F+ +
Sbjct: 112 DFDLLIKRIQSRFNKEVEV----YGVADLTANSLIDAADRFIPIED 153
>gi|307824132|ref|ZP_07654359.1| protein of unknown function DUF88 [Methylobacter tundripaludum
SV96]
gi|307734916|gb|EFO05766.1| protein of unknown function DUF88 [Methylobacter tundripaludum
SV96]
Length = 157
Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 37/165 (22%), Positives = 69/165 (41%), Gaps = 13/165 (7%)
Query: 5 REKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
EK+A+F+D N+Y ++K +Y + VI A+ Y GD +Q
Sbjct: 1 MEKVAIFVDVQNIYYTTKQSYRRHFNYTAFWSQATADREVIAAFAYAIDKGDCKQ----- 55
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF+V K + ++ K DV + +DA + + ++ +++ SGDG
Sbjct: 56 QGFQQVLRNIGFEVKLKPYIQRSDGS----AKGDWDVGITLDAIDYAAKVDVIILLSGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
F L+ + + + V P++ + L A F+ +
Sbjct: 112 DFDLLLDKARNI---YGVTTEVYGVPALTAPSLINSAGRFIAIDD 153
>gi|88796999|ref|ZP_01112589.1| hypothetical protein MED297_19237 [Reinekea sp. MED297]
gi|88779868|gb|EAR11053.1| hypothetical protein MED297_19237 [Reinekea sp. MED297]
Length = 159
Score = 148 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 72/163 (44%), Gaps = 15/163 (9%)
Query: 8 IALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
+A+ +D N+Y +++ A + DY + + ++ A Y GD +Q+
Sbjct: 4 VAILVDVQNVYYTTRHAFRRNFDYNRFWAQVSEQGTIVLANAYAVDRGDEKQKQ-----F 58
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126
+ L GF V K + + K DV + +DA + ++ + +V+ +GDG FT
Sbjct: 59 QNILRAIGFNVKLKPFIQRADGS----AKGDWDVGITIDALDAAQLADTVVLVTGDGDFT 114
Query: 127 TLVAALQR-KVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
LV L+ ++V + PS+ + L AD F+ +
Sbjct: 115 ILVDKLRNDLDRRVEV----YGVPSLTAKSLMDAADAFIPIDD 153
>gi|209694823|ref|YP_002262751.1| hypothetical protein VSAL_I1288 [Aliivibrio salmonicida LFI1238]
gi|208008774|emb|CAQ78973.1| conserved hypothetical protein [Aliivibrio salmonicida LFI1238]
Length = 157
Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats.
Identities = 41/165 (24%), Positives = 69/165 (41%), Gaps = 15/165 (9%)
Query: 5 REKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+ +A+ +D N+Y +++ DY L V+ A Y D +Q+
Sbjct: 1 MKTVAILVDVQNIYYTTRDVYQRHFDYNALWAKVTDGRKVVGANAYAIARSDDKQKQ--- 57
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
+ L GF V K + + K DV +A+DA E +E + +VI SGDG
Sbjct: 58 --FHNILRGIGFDVKLKPFIQRRDGS----AKGDWDVGIALDAIELAEQADIVVILSGDG 111
Query: 124 CFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
F LV +Q + K+V + + ++ L AD F+ +
Sbjct: 112 DFELLVQRIQSRFNKEVEV----YGVADLTANALIDAADRFIPIE 152
>gi|149190237|ref|ZP_01868512.1| hypothetical protein VSAK1_15107 [Vibrio shilonii AK1]
gi|148835984|gb|EDL52946.1| hypothetical protein VSAK1_15107 [Vibrio shilonii AK1]
Length = 174
Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 15/166 (9%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
E IA+F+D N+Y +++ A G DY L + A Y DP+Q
Sbjct: 16 MESIAIFVDVQNVYYTTRQAFGRRFDYNALWAKLSQSYRIDIARAYAISSTDPKQ----- 70
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF V K + + K DV LA+D +E + ++ +V+ SGDG
Sbjct: 71 RQFHHILRGIGFNVQLKPFIQRLDGS----AKGDWDVGLALDVYETANSVDRIVLISGDG 126
Query: 124 CFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
F LV +Q++ KVT+ S+ ++ L + AD ++++
Sbjct: 127 DFQVLVERIQQRFNTKVTVA----GVRSLTANNLIQAADDYIEIDS 168
>gi|325271797|ref|ZP_08138266.1| hypothetical protein G1E_03075 [Pseudomonas sp. TJI-51]
gi|324103068|gb|EGC00446.1| hypothetical protein G1E_03075 [Pseudomonas sp. TJI-51]
Length = 159
Score = 147 bits (373), Expect = 4e-34, Method: Composition-based stats.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 15/165 (9%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+KIALF D NLY + + A G +Y L ++ A Y GD +QQ
Sbjct: 1 MKKIALFADVQNLYYTVRQAHGCHFNYTALWADVCREGQIVEAVAYAIDRGDSKQQQ--- 57
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF V K + ++ K DV + +D + + ++ +V+ SGDG
Sbjct: 58 --FQQILRNLGFDVRLKPFIQRSDGS----AKGDWDVGITLDVIDAASRVDQVVLASGDG 111
Query: 124 CFTTLVA-ALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
F L+ +QR + + V P + + L R A ++ +
Sbjct: 112 DFDLLLERVIQRHGTE----AVVYGVPGLTALSLIRAASRYVPIE 152
>gi|149913285|ref|ZP_01901818.1| hypothetical protein RAZWK3B_08291 [Roseobacter sp. AzwK-3b]
gi|149812405|gb|EDM72234.1| hypothetical protein RAZWK3B_08291 [Roseobacter sp. AzwK-3b]
Length = 186
Score = 147 bits (373), Expect = 5e-34, Method: Composition-based stats.
Identities = 58/174 (33%), Positives = 97/174 (55%), Gaps = 3/174 (1%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
M +K+A+ IDG L + LG IDYR+L F + + YY V D ++
Sbjct: 6 MLYSTDKLAILIDGQALTSLGFGLGMKIDYRRLKSRFARVSKLTTVKYYAIV--DADKVE 63
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
+P LLDWL YNG+Q+ K+A+ F + G RVK S+ +L+VD ++ ++H+++
Sbjct: 64 NPYVKLLDWLDYNGYQIHRKMARVFDDVDG-ARVKGSITADLSVDIIMMAKQVDHILLIG 122
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
G + + +R +VT++S++ ++ +D LRR D F++L L+NEIA
Sbjct: 123 GHTDYCYAIQQAKRFGARVTLLSSLKAEGFRPADDLRRIVDDFIELEDLRNEIA 176
>gi|313500724|gb|ADR62090.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
Length = 159
Score = 147 bits (373), Expect = 5e-34, Method: Composition-based stats.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 15/165 (9%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+KIALF D NLY + + A G +Y L ++ A Y GD +QQ
Sbjct: 1 MKKIALFADVQNLYYTVRQAHGCHFNYTALWADVSREGQIVEAVAYAIDRGDSKQQQ--- 57
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF V K + ++ K DV + +D + + ++ +V+ SGDG
Sbjct: 58 --FQQILRNLGFDVRLKPFIQRSDGS----AKGDWDVGITLDVIDAASRVDQVVLASGDG 111
Query: 124 CFTTLVA-ALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
F L+ +QR + + V P + + L R A ++ +
Sbjct: 112 DFDLLLERVIQRHGTE----AVVYGVPGLTALSLIRAATRYVPIE 152
>gi|167035773|ref|YP_001671004.1| hypothetical protein PputGB1_4782 [Pseudomonas putida GB-1]
gi|166862261|gb|ABZ00669.1| protein of unknown function DUF88 [Pseudomonas putida GB-1]
Length = 159
Score = 147 bits (372), Expect = 6e-34, Method: Composition-based stats.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 15/165 (9%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+KIALF D NLY + + A G +Y L ++ A Y GD +QQ
Sbjct: 1 MKKIALFADVQNLYYTVRQAHGCHFNYTALWADVSREGQIVEAVAYAIDRGDAKQQQ--- 57
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L GF V K + ++ K DV + +D + + ++ +V+ SGDG
Sbjct: 58 --FQQILRNLGFDVRLKPFIQRSDGS----AKGDWDVGITLDVIDAASRVDQVVLASGDG 111
Query: 124 CFTTLVA-ALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
F L+ +QR + + V P + + L R A ++ +
Sbjct: 112 DFDLLLERVIQRHGTE----AVVYGVPGLTALSLIRAATRYVPIE 152
>gi|298246249|ref|ZP_06970055.1| protein of unknown function DUF88 [Ktedonobacter racemifer DSM
44963]
gi|297553730|gb|EFH87595.1| protein of unknown function DUF88 [Ktedonobacter racemifer DSM
44963]
Length = 933
Score = 146 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 41/172 (23%), Positives = 79/172 (45%), Gaps = 14/172 (8%)
Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
F E++ +F+D ANL S++ L +D+ KLL R ++RA Y +
Sbjct: 771 FPSTERVGVFVDVANLLYSARTLRMSVDFGKLLDFLRGNRRLVRAQAYCPTSPQAGDE-- 828
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIF 119
L + G+++ K K F+ K+ +D++L +D E ++ +V+
Sbjct: 829 --QMFLQAVKGLGYRITTKNYKTFSSGA----KKADLDLDLCMDVVRLVEGRAVDCIVLV 882
Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
SGD F ++ +V + + D +M++ LR+ D F++L+ L+
Sbjct: 883 SGDSDFMPMLDYCSDHGVRVEVAAF---DEAMSA-TLRQSCDLFVNLSLLEE 930
>gi|59711738|ref|YP_204514.1| hypothetical protein VF_1131 [Vibrio fischeri ES114]
gi|59479839|gb|AAW85626.1| conserved protein [Vibrio fischeri ES114]
Length = 159
Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats.
Identities = 37/166 (22%), Positives = 68/166 (40%), Gaps = 15/166 (9%)
Query: 5 REKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+ +A+ +D N+Y +++ DY L V+ A Y D +Q+
Sbjct: 3 MKTVAILVDVQNIYYTTRDVYQRHFDYNALWAKVTEGRTVVGANAYAIARSDDKQKQ--- 59
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
+ L GF V K + + K DV + +DA E +E + +V+ SGDG
Sbjct: 60 --FHNILRGIGFDVKLKPFIQRRDGS----AKGDWDVGITLDAIELAEQADIVVLLSGDG 113
Query: 124 CFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
F L+ +Q + K+V + + ++ + AD F+ +
Sbjct: 114 DFDLLIKRIQSRFNKEVEV----YGVADLTANSIIDAADRFIPIED 155
>gi|315126212|ref|YP_004068215.1| hypothetical protein PSM_A1121 [Pseudoalteromonas sp. SM9913]
gi|315014726|gb|ADT68064.1| hypothetical protein PSM_A1121 [Pseudoalteromonas sp. SM9913]
Length = 164
Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 72/167 (43%), Gaps = 13/167 (7%)
Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
+ ++ +F+D N+Y + + + G + DY + + + A+ Y GD +Q
Sbjct: 6 SSKPRVGIFVDVQNIYYTCRESYGKNFDYNAFWRMIEQQYDIECAFAYAIYRGDEKQNQ- 64
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
+ L GF+V K + + K DV + +D EQ + L+ +++ SG
Sbjct: 65 ----FQNILRAIGFEVKLKPFIQRRDGS----AKGDWDVGITIDMLEQGKQLDKVILLSG 116
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
DG F L+ L+ + + V + ++ L++ A+ F +
Sbjct: 117 DGDFALLLGHLKNQYN---VSCDVYGADKLTAEVLKQSAEQFHLIDN 160
>gi|77360859|ref|YP_340434.1| hypothetical protein PSHAa1927 [Pseudoalteromonas haloplanktis
TAC125]
gi|76875770|emb|CAI86991.1| conserved protein of unknown function [Pseudoalteromonas
haloplanktis TAC125]
Length = 167
Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats.
Identities = 34/167 (20%), Positives = 72/167 (43%), Gaps = 13/167 (7%)
Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
+ + ++ +F+D N+Y + + + G + DY + + + A+ Y GD +Q
Sbjct: 9 NTKPRVGIFVDVQNIYYTCRESYGKNFDYNAFWRVMAQQYNIECAFAYAIYRGDEKQSQ- 67
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
+ L GF+V K + + K DV + +D E + L+ +++ SG
Sbjct: 68 ----FQNILRAIGFEVKLKPFIQRRDGS----AKGDWDVGITIDMLEHGKNLDKVILLSG 119
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
DG F L+ L+ + + V + ++ L++ A+ F +
Sbjct: 120 DGDFALLLGHLKSQYN---VSCDVYGADRLTAEALKQSAEQFHLIDN 163
>gi|325294340|ref|YP_004280854.1| hypothetical protein Dester_0137 [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325064788|gb|ADY72795.1| hypothetical protein Dester_0137 [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 195
Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats.
Identities = 45/177 (25%), Positives = 87/177 (49%), Gaps = 13/177 (7%)
Query: 7 KIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
++A+F+D N+Y +K L +D+++LL+ + RA Y + Q
Sbjct: 17 RVAVFVDMQNIYYGAKNTLKKKVDFKRLLELGVRGRTLYRAIAYLVDLDKVNQD-----S 71
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDG 123
+ L G++V K K+F + + K+ D+ +A+DA +E ++ +V+ SGDG
Sbjct: 72 FIYVLRSLGYEVKLKEPKKFY-SWDKIEYKADWDMGIAIDAIAMAENGKIDVVVLMSGDG 130
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
F L+ L+ K KV ++S S+ + +L A+ ++DL + + I + E+
Sbjct: 131 DFVDLINFLKAKGIKVEVISF----RSITAKELIHAANEYIDLGEIGDYIVLEEKEN 183
>gi|254428823|ref|ZP_05042530.1| conserved hypothetical protein [Alcanivorax sp. DG881]
gi|196194992|gb|EDX89951.1| conserved hypothetical protein [Alcanivorax sp. DG881]
Length = 157
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 15/165 (9%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+ + + +D N+Y +++ A DY + + V++A Y GD +Q
Sbjct: 1 MKTVLILVDVQNVYYTTRQAFNRRFDYNQFWSTVTAEGQVVKAIAYAIDRGDKKQ----- 55
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
+ L GF+V K + ++ K DV +A+DA E + ++ +V+ SGDG
Sbjct: 56 REFQNILRAIGFEVKLKPFIQRSDGS----AKGDWDVGIAIDALEYAAEVDSVVLVSGDG 111
Query: 124 CFTTLVAALQ-RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
F LV L+ K K V + + +D L R A F+ +
Sbjct: 112 DFDLLVDKLRVDKGKHVDV----YGVAPLTADSLARAASRFVPIE 152
>gi|23009928|ref|ZP_00050797.1| COG1432: Uncharacterized conserved protein [Magnetospirillum
magnetotacticum MS-1]
Length = 110
Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats.
Identities = 48/95 (50%), Positives = 74/95 (77%)
Query: 78 VAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVK 137
+ K KEFT++ GR+++K +MD+ELA+DA E + ++H+V+FSGDG F +LV A+QR+
Sbjct: 1 MTKPVKEFTDSAGRRKIKGNMDIELAIDALELAPYIDHMVLFSGDGDFRSLVEAIQRRGV 60
Query: 138 KVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
+V++VST+ + P+M +D LRRQAD F+DLA+L N
Sbjct: 61 RVSVVSTIQTQPAMIADDLRRQADEFVDLAHLANR 95
>gi|312881670|ref|ZP_07741448.1| hypothetical protein VIBC2010_10472 [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309370733|gb|EFP98207.1| hypothetical protein VIBC2010_10472 [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 158
Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats.
Identities = 40/166 (24%), Positives = 70/166 (42%), Gaps = 15/166 (9%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
EKIA+F+D N+Y +++ DY + V+ A Y ++
Sbjct: 1 MEKIAIFVDVQNIYYTTREKYRAHFDYNHFWHVVATEKEVVVANAYAIASK--HEKQRQF 58
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
H +L + GF+V K + + K D+ +A+D ++ S+ ++ +++ SGDG
Sbjct: 59 HHILRGI---GFEVKLKPFLQRKDG----TAKGDWDIGIALDIYDISKEVDRVILLSGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVST-VLSDPSMASDQLRRQADYFMDLAY 168
F LV + KK + V PS+ S L D F +
Sbjct: 112 DFEVLVDRV----KKTSNAKFDVFGVPSLTSQSLIDVCDNFTPIDE 153
>gi|294495612|ref|YP_003542105.1| hypothetical protein Mmah_0940 [Methanohalophilus mahii DSM 5219]
gi|292666611|gb|ADE36460.1| protein of unknown function DUF88 [Methanohalophilus mahii DSM
5219]
Length = 161
Score = 144 bits (365), Expect = 4e-33, Method: Composition-based stats.
Identities = 40/161 (24%), Positives = 75/161 (46%), Gaps = 15/161 (9%)
Query: 1 MFDPREKIALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
MF +K+A+F+D N++ S++ + + +DY KLL+A + RA Y D +Q
Sbjct: 1 MFSS-QKLAVFVDVQNMFYSARNIHYGRLDYEKLLRAVVMERKLTRAIAYLVETPDIDQS 59
Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119
++ G++V +K K + K D+ +A+DA + ++ +V+
Sbjct: 60 -----GFKSFIGSIGWEVKSKALKVRPDGS----TKGDWDMGIAIDAISIAPKVDTIVLV 110
Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160
SGDG F L+ L+ +V + S +++L A
Sbjct: 111 SGDGDFVDLINHLKAIGVRVEVHSF----KESTAEELINAA 147
>gi|195953568|ref|YP_002121858.1| protein of unknown function DUF88 [Hydrogenobaculum sp. Y04AAS1]
gi|195933180|gb|ACG57880.1| protein of unknown function DUF88 [Hydrogenobaculum sp. Y04AAS1]
Length = 176
Score = 144 bits (364), Expect = 5e-33, Method: Composition-based stats.
Identities = 47/180 (26%), Positives = 85/180 (47%), Gaps = 13/180 (7%)
Query: 3 DPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
+ R+ +FIDG NLY K L F +D KL++ F + + ++Y + E+Q
Sbjct: 6 NSRKIAGIFIDGTNLYFVQKQFLDFKVDILKLVRYFANYFAIYNTFFYLAYKEEEEKQ-- 63
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
+ L + G V+ K K+ + +K ++DV+LA+D + + ++ +G
Sbjct: 64 --NKFYRMLTFGGVTVIKKAVKQLKDGS----MKGNLDVDLAMDCLLTKDNYDVAILVTG 117
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
D F L+ L+ K++ +VST S +S +L D F++L L I + E +
Sbjct: 118 DSDFEKLINILRTFGKQIIVVSTKDS----SSIELVNICDLFVELKDLAPFIKLEEHEKQ 173
>gi|332535674|ref|ZP_08411432.1| hypothetical protein PH505_dg00100 [Pseudoalteromonas haloplanktis
ANT/505]
gi|332034924|gb|EGI71450.1| hypothetical protein PH505_dg00100 [Pseudoalteromonas haloplanktis
ANT/505]
Length = 167
Score = 143 bits (362), Expect = 9e-33, Method: Composition-based stats.
Identities = 35/165 (21%), Positives = 73/165 (44%), Gaps = 13/165 (7%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+ ++ +F+D N+Y + + + G + DY + ++ + A+ Y GD +Q
Sbjct: 11 KPRVGIFVDVQNIYYTCRESYGKNFDYNAFWRMMEAQYNIECAFAYAIYRGDEKQNQ--- 67
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
+ L GF+V K + + K DV + +D EQ + L+ +++ SGDG
Sbjct: 68 --FQNILRAIGFEVKLKPFIQRRDGS----AKGDWDVGITIDMLEQGKNLDKVILLSGDG 121
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
F L+ L+ + + V + ++ L++ A+ F +
Sbjct: 122 DFALLLGHLKNQYN---VPCDVYGADRLTAEVLKQSAEQFHLIDN 163
>gi|328952819|ref|YP_004370153.1| Domain of unknown function DUF88 [Desulfobacca acetoxidans DSM
11109]
gi|328453143|gb|AEB08972.1| Domain of unknown function DUF88 [Desulfobacca acetoxidans DSM
11109]
Length = 297
Score = 143 bits (362), Expect = 9e-33, Method: Composition-based stats.
Identities = 41/162 (25%), Positives = 82/162 (50%), Gaps = 12/162 (7%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAF-RSRAIVIRAYYYTTVVGDP---EQQFSP 62
KI +++D N+ + G+ + Y L + R+ ++R Y + + + ++
Sbjct: 30 KIGVYVDSMNI---VRNGGYGMRYEVLRRFATRNGGQIVRLNAYVALDEERVGADPNYNA 86
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
+ L GF+V+ K + FT+ GR K++ D+++A+D QS+ L+ +++ +GD
Sbjct: 87 TLNFISTLRDLGFKVIEKPIRWFTDESGRTYGKANADMDMALDIISQSDRLDMVLLLTGD 146
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
G F +V +Q K +V +V+ + S LRR+ D F+
Sbjct: 147 GDFCNVVTMVQNKGCRVELVAF-----ANVSSWLRREVDLFV 183
>gi|87121768|ref|ZP_01077655.1| hypothetical protein MED121_19509 [Marinomonas sp. MED121]
gi|86163019|gb|EAQ64297.1| hypothetical protein MED121_19509 [Marinomonas sp. MED121]
Length = 163
Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 69/164 (42%), Gaps = 13/164 (7%)
Query: 1 MFDPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
+ D KIA+F+D N+Y +S+ +Y+K ++ +++AY Y GD +Q
Sbjct: 3 VIDSAPKIAIFVDVQNIYYTSRHTFARHFNYQKFWDEIAAQGEIVQAYAYAIDKGDSKQA 62
Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119
L GF+V K + + K DV + +D + ++ +V+
Sbjct: 63 Q-----FQQILRGIGFEVKLKPFIQRRDGS----AKGDWDVGITIDVLAAAPDVDIIVLA 113
Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163
SGDG F L+ A + K + S V + + L D +
Sbjct: 114 SGDGDFALLLDAARTKYQ---CQSQVYGVDKLTAAALIDSCDLY 154
>gi|262189634|ref|ZP_06048020.1| hypothetical protein VIH_000054 [Vibrio cholerae CT 5369-93]
gi|262034486|gb|EEY52840.1| hypothetical protein VIH_000054 [Vibrio cholerae CT 5369-93]
Length = 145
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 15/154 (9%)
Query: 17 LYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGF 75
+Y + + G DY + V++A Y DP+Q+ H +L + G
Sbjct: 1 MYYTCREQYGRHFDYNQFWSQVTQNRTVVKANAYAIASKDPQQR--QFHHILRGI---GL 55
Query: 76 QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAAL-QR 134
+V+ K + ++ K DV +A+D +E ++ ++ +V+ SGDG F LV + QR
Sbjct: 56 EVMLKPFIQRSDGS----AKGDWDVGIALDGYELAQEVDTVVLVSGDGDFEPLVTRIAQR 111
Query: 135 KVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
KV + P + + L A F + +
Sbjct: 112 FQVKVEV----YGVPKLTAQHLIDVASQFHPIEH 141
>gi|90415555|ref|ZP_01223489.1| hypothetical protein GB2207_09566 [marine gamma proteobacterium
HTCC2207]
gi|90332878|gb|EAS48048.1| hypothetical protein GB2207_09566 [marine gamma proteobacterium
HTCC2207]
Length = 161
Score = 142 bits (360), Expect = 1e-32, Method: Composition-based stats.
Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 16/166 (9%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+KIA+F+D N+Y + K G +YR+L + + +++A Y D Q
Sbjct: 1 MKKIAVFVDVQNIYYTVKEQFGCYFNYRELWRQLGEQGEIVQATAYAIERNDAGQ----- 55
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGL---EHLVIFS 120
L GF+V K + ++ K DV +A+D + + E +V+ S
Sbjct: 56 RGFQQVLRDIGFEVKLKPFIQRSDGS----AKGDWDVGIAIDIMDCAATTNPPEEIVLLS 111
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
GDG F L+A + + + + ++V ++ + L AD+F +
Sbjct: 112 GDGDFDLLLARVSQ---RYAVSTSVFGVAALTAASLIDAADHFQPI 154
>gi|332993345|gb|AEF03400.1| hypothetical protein ambt_09370 [Alteromonas sp. SN2]
Length = 157
Score = 142 bits (360), Expect = 1e-32, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 69/162 (42%), Gaps = 14/162 (8%)
Query: 5 REKIALFIDGANLYASSKALG-FDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+ +ALF+D N+Y +++ + + DY + V++A Y GD +Q
Sbjct: 1 MDNVALFVDVQNIYYTTRQIHKCNFDYNHFWRLATEGRNVVKAVAYAIERGDTKQ----- 55
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
+ L GF+V K + + K DV + +DA E ++ + +V +GDG
Sbjct: 56 REFQNILRGIGFEVKLKPFIQRADGS----AKGDWDVGITIDAMEYADLADTIVFATGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165
F L + L K K+V + + S L + A ++
Sbjct: 112 DFDILASKLVDKGKEVEV----YGVQELTSVSLIKAASKYVP 149
>gi|331005219|ref|ZP_08328612.1| hypothetical protein IMCC1989_1379 [gamma proteobacterium IMCC1989]
gi|330420962|gb|EGG95235.1| hypothetical protein IMCC1989_1379 [gamma proteobacterium IMCC1989]
Length = 170
Score = 142 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 36/168 (21%), Positives = 71/168 (42%), Gaps = 15/168 (8%)
Query: 4 PREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
R+KIA+F+D N+Y +++ +YR L + +++ ++ A Y GD +Q
Sbjct: 10 SRKKIAVFVDVQNIYYTTRDRYNKPFNYRHLWQRLQAQGDIVIANAYAIHRGDDKQLQ-- 67
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFS 120
L GF + K + + K DV +A+D + + + +++ S
Sbjct: 68 ---FQSALKSIGFTMKLKPYIQRKDGS----AKGDWDVGIAIDVMDVAASGTADTIILLS 120
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
GDG F L+ ++ K + + V + ++ L A F +
Sbjct: 121 GDGDFDLLLEKVK---KDYHMTTEVYGVAELTANSLITSATTFHPITE 165
>gi|320160886|ref|YP_004174110.1| hypothetical protein ANT_14820 [Anaerolinea thermophila UNI-1]
gi|319994739|dbj|BAJ63510.1| hypothetical protein ANT_14820 [Anaerolinea thermophila UNI-1]
Length = 302
Score = 142 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 50/170 (29%), Positives = 83/170 (48%), Gaps = 13/170 (7%)
Query: 9 ALFIDGANLYASSKALGFDIDYRKLLKA-FRSRAIVIRAYYYTTVV----GDPEQQFSPL 63
+F+D AN+Y + G + Y L + R A IR Y T D E+
Sbjct: 34 GVFVDVANIYLNG---GQRMQYDVLREFACRDHAEAIRLNAYVTYDVERAEDDEEYRKGA 90
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L G++V+ K +T+ G + K++ D+++AVDA QS+ L+ ++I SGDG
Sbjct: 91 QNFHGALRDLGYKVIVKDIHWYTDVNGIRVAKANADLDMAVDALTQSDYLDRVLIASGDG 150
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
F +V ALQ K +V +V S++L+ +AD+F+ + + I
Sbjct: 151 DFVQVVRALQNKGCRVEVVGL-----DNVSNRLKAEADFFISGYLIPDLI 195
>gi|326794335|ref|YP_004312155.1| hypothetical protein Marme_1044 [Marinomonas mediterranea MMB-1]
gi|326545099|gb|ADZ90319.1| Domain of unknown function DUF88 [Marinomonas mediterranea MMB-1]
Length = 204
Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 66/164 (40%), Gaps = 13/164 (7%)
Query: 8 IALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
++F+D N+Y +++ DY S+ + AY Y GD +Q+
Sbjct: 51 ASIFVDVQNIYYTTRQTYRRGFDYNAFWAEVSSKYDIKNAYAYAIDRGDEKQKQ-----F 105
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126
+ L GF V K + + K DV + +D E +E + +++ +GDG F+
Sbjct: 106 QNILRAIGFDVKLKPYIQRADGS----SKGDWDVGITIDVMEHAEESDVVILVTGDGDFS 161
Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
L ++ K + + V + + L AD + + +
Sbjct: 162 ILADKIKGKYR---CLVEVYGVEKLTATSLINTADVYYPIEDSR 202
>gi|152994925|ref|YP_001339760.1| hypothetical protein Mmwyl1_0893 [Marinomonas sp. MWYL1]
gi|150835849|gb|ABR69825.1| protein of unknown function DUF88 [Marinomonas sp. MWYL1]
Length = 158
Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats.
Identities = 40/158 (25%), Positives = 67/158 (42%), Gaps = 15/158 (9%)
Query: 8 IALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
+ + +D N+Y +++ A G DY + V++A Y GD +Q
Sbjct: 4 VTILVDVQNVYYTTRQAFGRSFDYNTFWQQATEGRNVVKAIAYAIDRGDEKQ-----RQF 58
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126
+ L GF+V K + ++ K DV +A+D E + + LV+ SGDG F
Sbjct: 59 QNILRAIGFEVKLKPFIQRSDGS----AKGDWDVGIAIDGIEHGKDSDVLVLLSGDGDFD 114
Query: 127 TLVAALQRKVK-KVTIVSTVLSDPSMASDQLRRQADYF 163
L L+ K + +V + S+ + L AD F
Sbjct: 115 ILAKTLREKYQTRVEV----YGVESLTAQSLINAADSF 148
>gi|5441510|emb|CAB46751.1| hypothetical protein [Synechococcus elongatus]
Length = 142
Score = 141 bits (357), Expect = 3e-32, Method: Composition-based stats.
Identities = 38/144 (26%), Positives = 70/144 (48%), Gaps = 12/144 (8%)
Query: 35 KAFRSRAI--VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC-GR 91
+ F ++ A++YT + +Q D L G+ V K+ KE+ + G+
Sbjct: 1 EFFTRDPKIVLVNAFWYTGLKDMQDQ-----RSFRDALINLGYTVRTKLLKEYYDESLGK 55
Query: 92 KRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151
K+++D+E+ +D F + +V+FSGDG F + L+ K +T+VST M
Sbjct: 56 YYQKANLDIEIVIDMFNTVGQYDRVVLFSGDGDFERAIELLRSKNTHITVVST----EGM 111
Query: 152 ASDQLRRQADYFMDLAYLKNEIAR 175
+ +LR D ++DL ++ I +
Sbjct: 112 IARELRNATDRYIDLNEIRPFIEK 135
>gi|46200099|ref|YP_005766.1| hypothetical protein TTC1797 [Thermus thermophilus HB27]
gi|55980158|ref|YP_143455.1| hypothetical protein TTHA0189 [Thermus thermophilus HB8]
gi|46197727|gb|AAS82139.1| hypothetical conserved protein [Thermus thermophilus HB27]
gi|55771571|dbj|BAD70012.1| conserved hypothetical protein [Thermus thermophilus HB8]
Length = 181
Score = 141 bits (356), Expect = 5e-32, Method: Composition-based stats.
Identities = 44/181 (24%), Positives = 84/181 (46%), Gaps = 12/181 (6%)
Query: 5 REKIALFIDGANLYAS-SKALG--FDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
E++A+FIDG+NLY + LG + +++ + + + ++RAYYY + +
Sbjct: 1 MERVAIFIDGSNLYKGLVQHLGSDYRLNFVEFITLLTAGRKLLRAYYYNAPLPPEDPAAK 60
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIF 119
L++L + V ++ + E V+ +D+++AVD + + V+
Sbjct: 61 AHQSFLNYLKRVPY-VTVRLGR--LERRADGFVEKGVDIQIAVDMLRLAFVNAYDIAVLV 117
Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
SGDG F +V +Q K+V + +++S +L +QAD+F L E R
Sbjct: 118 SGDGDFAEVVRVVQDLGKQVENTTF----HALSSHRLAQQADHFYPLDDFPWERLRAQVS 173
Query: 180 D 180
Sbjct: 174 P 174
>gi|319790275|ref|YP_004151908.1| hypothetical protein Theam_1304 [Thermovibrio ammonificans HB-1]
gi|317114777|gb|ADU97267.1| hypothetical protein Theam_1304 [Thermovibrio ammonificans HB-1]
Length = 181
Score = 141 bits (355), Expect = 5e-32, Method: Composition-based stats.
Identities = 45/169 (26%), Positives = 79/169 (46%), Gaps = 13/169 (7%)
Query: 8 IALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
+ +F+D N+Y +K L +D++ LLK + RA Y + Q
Sbjct: 18 VGVFVDMQNIYYGAKNTLKRKVDFKNLLKIAVRGRQLYRAIAYLVDLERVNQD-----GF 72
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGC 124
+ L G++V K K+F N + K+ D+ +A+DA +E ++ +V+ SGDG
Sbjct: 73 IYVLRSIGYEVKLKEPKKFY-NWDKVEYKADWDMGIAIDAIAMAENGKVDVVVLMSGDGD 131
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
F L+ L+ K KV ++S S+ + +L A ++DL + I
Sbjct: 132 FVDLINFLKAKGIKVEVISF----RSITAKELIYSASEYIDLEEFADFI 176
>gi|320449117|ref|YP_004201213.1| hypothetical protein TSC_c00110 [Thermus scotoductus SA-01]
gi|320149286|gb|ADW20664.1| hypothetical protein TSC_c00110 [Thermus scotoductus SA-01]
Length = 181
Score = 141 bits (355), Expect = 5e-32, Method: Composition-based stats.
Identities = 43/182 (23%), Positives = 85/182 (46%), Gaps = 12/182 (6%)
Query: 5 REKIALFIDGANLYAS-SKALG--FDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
E++A+FIDG+NLY + LG + +++ + + + ++RAYYY + +
Sbjct: 1 MERVAIFIDGSNLYKGLVQHLGPDYRLNFVEFISLLTAGRRLLRAYYYNAPLPPEDPAAK 60
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIF 119
L++L + V ++ + E V+ +D+++A+D + + + V+
Sbjct: 61 AHQSFLNYLKRVPY-VAVRLGR--LERRADGFVEKGVDIQIAIDILRLAYADAYDVAVLV 117
Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
SGDG F +V +Q K+V + +++S +L +QAD F L E R
Sbjct: 118 SGDGDFAEVVKVVQDMGKQVENTTF----HALSSHRLAQQADRFYPLDDFPWERLRAQSL 173
Query: 180 DK 181
+
Sbjct: 174 PQ 175
>gi|51244756|ref|YP_064640.1| hypothetical protein DP0904 [Desulfotalea psychrophila LSv54]
gi|50875793|emb|CAG35633.1| hypothetical protein DP0904 [Desulfotalea psychrophila LSv54]
Length = 258
Score = 140 bits (354), Expect = 7e-32, Method: Composition-based stats.
Identities = 44/169 (26%), Positives = 81/169 (47%), Gaps = 13/169 (7%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSR-AIVIRAYYYTTVV----GD 55
M++ K +++D N+ G+ + Y L++ S A ++RA Y D
Sbjct: 1 MYNDMLKTGIYVDAENIRMCG---GYGMRYDVLVELAGSGNAALLRANSYVAEDRERTKD 57
Query: 56 PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEH 115
+ L+ D L GF+V+ K K F ++ G K++ D++LA+DA Q+ L+
Sbjct: 58 DAEYRHKLYRYHDVLRQCGFKVIKKFVKHFVDDEGILTTKANADMDLAIDALLQARNLDR 117
Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
+++ +GD F L+ ALQ +V +++ S +L+ AD F+
Sbjct: 118 IILLTGDSDFIRLILALQNMGCRVEVIAF-----KHVSQELKECADNFL 161
>gi|119471730|ref|ZP_01614090.1| hypothetical protein ATW7_08766 [Alteromonadales bacterium TW-7]
gi|119445353|gb|EAW26641.1| hypothetical protein ATW7_08766 [Alteromonadales bacterium TW-7]
Length = 162
Score = 140 bits (354), Expect = 8e-32, Method: Composition-based stats.
Identities = 35/163 (21%), Positives = 71/163 (43%), Gaps = 13/163 (7%)
Query: 7 KIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
K+ +F+D N+Y + + + + DY + + + + A+ Y GD +Q
Sbjct: 8 KVGIFVDVQNIYYTCRESYSKNFDYNAFWRVIQEQYEIDCAFAYAIYRGDEKQNQ----- 62
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
+ L GF+V K + + K DV + +D E + L+ +++ SGDG F
Sbjct: 63 FQNILRAIGFEVKLKPFIQRRDGS----AKGDWDVGITIDMLEHGKNLDKVILLSGDGDF 118
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
L+A L+ + + V + ++ L++ A+ F +
Sbjct: 119 ALLLAHLKNQYN---VPCDVYGADKLTAEVLKQSAEQFHLIDD 158
>gi|317050842|ref|YP_004111958.1| hypothetical protein Selin_0654 [Desulfurispirillum indicum S5]
gi|316945926|gb|ADU65402.1| hypothetical protein Selin_0654 [Desulfurispirillum indicum S5]
Length = 290
Score = 140 bits (353), Expect = 9e-32, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 82/166 (49%), Gaps = 13/166 (7%)
Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKA-FRSRAIVIRAYYYTTVVGDPEQQFSP 62
K+ +++D ANL + G+ + Y L + R A ++R Y + D + +P
Sbjct: 17 SNAKVGVYVDVANL---VRNGGYGMRYEVLREFACRDGAELVRLNAYVSFDVDRASKDAP 73
Query: 63 LH----PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVI 118
L G++V+ K K + + G + K++ D+++AVDA QSE L+ +++
Sbjct: 74 YKYKMTNFYAILRDFGYKVIEKPVKWYVDESGNRFGKANADLDMAVDALLQSENLDRVLL 133
Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
+GDG F +V ALQ K +V ++ S L++++D FM
Sbjct: 134 VTGDGDFVQVVRALQNKGCRVETMAF-----QNISSDLKKESDMFM 174
>gi|297567046|ref|YP_003686018.1| hypothetical protein Mesil_2661 [Meiothermus silvanus DSM 9946]
gi|296851495|gb|ADH64510.1| protein of unknown function DUF88 [Meiothermus silvanus DSM 9946]
Length = 181
Score = 139 bits (352), Expect = 1e-31, Method: Composition-based stats.
Identities = 46/183 (25%), Positives = 91/183 (49%), Gaps = 12/183 (6%)
Query: 5 REKIALFIDGANLYA---SSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
E++A+FIDG+NLY SS + + +D+ + ++ + ++RAYYY + +
Sbjct: 1 MERVAVFIDGSNLYKGLVSSLSSDYRLDFVQFIETLVAGRKLLRAYYYNAPLPVEDPAAK 60
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIF 119
L++L + V ++ + E G V+ +D+++A+D + + + V+
Sbjct: 61 AHQSFLNYLKRVPY-VAVRLGR--LERRGEGFVEKGVDIQIAIDLLKLAYANAYDVAVLV 117
Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
SGDG F +V +Q K+V + +++S +L +QAD F L L E R +
Sbjct: 118 SGDGDFADVVKVIQDMGKQVENSTF----QALSSHRLAQQADRFFPLDELPWERLRARAQ 173
Query: 180 DKK 182
+++
Sbjct: 174 EEQ 176
>gi|218296000|ref|ZP_03496780.1| protein of unknown function DUF88 [Thermus aquaticus Y51MC23]
gi|218243738|gb|EED10266.1| protein of unknown function DUF88 [Thermus aquaticus Y51MC23]
Length = 181
Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 42/182 (23%), Positives = 85/182 (46%), Gaps = 12/182 (6%)
Query: 5 REKIALFIDGANLYAS-SKALG--FDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
E++A+FIDG+NLY + LG + +++ + + + ++RAYYY + +
Sbjct: 1 MERVAIFIDGSNLYKGLVQHLGSDYRLNFVEFITLLTAGRKLLRAYYYNAPLPPEDPAAK 60
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIF 119
L++L + V ++ + E V+ +D+++A+D + + + ++
Sbjct: 61 AHQSFLNYLKRVPY-VAVRLGR--LERRAEGFVEKGVDIQIAIDILRLAYADAYDIAILV 117
Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
SGDG F +V +Q K+V + +++S +L +QAD F L E R
Sbjct: 118 SGDGDFAEVVRVVQDMGKQVENTTF----HALSSHRLAQQADRFYPLDDFPWERLRATSL 173
Query: 180 DK 181
+
Sbjct: 174 PQ 175
>gi|237808056|ref|YP_002892496.1| hypothetical protein Tola_1293 [Tolumonas auensis DSM 9187]
gi|237500317|gb|ACQ92910.1| protein of unknown function DUF88 [Tolumonas auensis DSM 9187]
Length = 162
Score = 138 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 68/165 (41%), Gaps = 13/165 (7%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
E++ + +D N+Y ++K A + DY K + V++A Y GD +Q
Sbjct: 1 MERVVVLVDVQNIYYTTKQAYNCNFDYNAFWKKVTANRQVVKAIAYAIDRGDEKQ----- 55
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
+ L GF+V K + + K + D+ + +DA E ++ + +V+ SGDG
Sbjct: 56 RQFQNILRAIGFEVKLKPLIQRVDG----TAKGNWDIGITLDAMEYAKESDIVVLASGDG 111
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
F L+ + K V P S L A F+ +
Sbjct: 112 DFDLLINKIH---KDYDAWVEVYGVPKYTSVALVNSASKFIPVDS 153
>gi|313679213|ref|YP_004056952.1| hypothetical protein Ocepr_0319 [Oceanithermus profundus DSM 14977]
gi|313151928|gb|ADR35779.1| protein of unknown function DUF88 [Oceanithermus profundus DSM
14977]
Length = 173
Score = 136 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 43/173 (24%), Positives = 82/173 (47%), Gaps = 12/173 (6%)
Query: 5 REKIALFIDGANLYA---SSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
E++A+FIDG+NLY S+ + +D+ K ++ + ++RAYYY + +
Sbjct: 1 MERVAIFIDGSNLYKGLVSTLGSEYRLDFVKFIETLVAGRKLLRAYYYNAPLPTEDAASR 60
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIF 119
L++L + V ++ + E G V+ +D+++AVD + + V+
Sbjct: 61 AHQSFLNYLKRVPY-VSVRLGR--LERRGDTFVEKGVDIQIAVDMLRLAYARAYDVGVLV 117
Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
SGDG F +V +Q +V + +++S +L +QAD F L +
Sbjct: 118 SGDGDFAEVVRVIQDMGMQVENATF----HALSSYRLAQQADRFYPLDEFPWD 166
>gi|94500534|ref|ZP_01307065.1| hypothetical protein RED65_15728 [Oceanobacter sp. RED65]
gi|94427324|gb|EAT12303.1| hypothetical protein RED65_15728 [Oceanobacter sp. RED65]
Length = 157
Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats.
Identities = 37/162 (22%), Positives = 71/162 (43%), Gaps = 13/162 (8%)
Query: 8 IALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
IA+F D N+Y +++ +Y+ L++ ++ ++++A+ Y G Q
Sbjct: 4 IAVFADVQNIYYTTRDRFKRSFNYKALIEQLKNEGVIVQAHAYAIDRGIDSQI-----KF 58
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126
D L GF V K + + K DV + +D E ++ +E +V+ SGDG F
Sbjct: 59 QDALRNMGFDVHLKPFIQRRDGS----AKGDWDVGITIDIMEAAKDVEEVVLLSGDGDFA 114
Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
L+ ++ + S V + ++ L + D F D+
Sbjct: 115 ILLEHIRDHYQTT---SKVYGVEFLTANGLIKSCDVFRDIDE 153
>gi|297622586|ref|YP_003704020.1| hypothetical protein Trad_0338 [Truepera radiovictrix DSM 17093]
gi|297163766|gb|ADI13477.1| protein of unknown function DUF88 [Truepera radiovictrix DSM 17093]
Length = 198
Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 77/170 (45%), Gaps = 10/170 (5%)
Query: 4 PREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
P +++ LF+D NLY +++ +DY +LK ++ A Y +
Sbjct: 34 PEQRVGLFVDTQNLYYAARDIYSRHVDYAVMLKLSERSRHLVHATAYVVEREGEATAY-- 91
Query: 63 LHPLLDWLHYNGFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
+ L G++V + + ++ GR ++ D+ +A D + L+ +V+ SG
Sbjct: 92 --GFVTKLSALGYRVRRRKVRVHRADSGGRPVLEGDWDMGIAADIVRAWDYLDVIVLASG 149
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
DG F ++ Q++ K+V +++ AS L AD FM LA + +
Sbjct: 150 DGDFAPMLELAQQRGKRVEVLAF----REAASQNLLDLADAFMGLADVPD 195
>gi|114319473|ref|YP_741156.1| hypothetical protein Mlg_0311 [Alkalilimnicola ehrlichii MLHE-1]
gi|114225867|gb|ABI55666.1| protein of unknown function DUF88 [Alkalilimnicola ehrlichii
MLHE-1]
Length = 274
Score = 134 bits (339), Expect = 4e-30, Method: Composition-based stats.
Identities = 44/169 (26%), Positives = 82/169 (48%), Gaps = 13/169 (7%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKA-FRSRAIVIRAYYYTTVVGDPEQQ 59
M + + +++D AN+ + GF + Y L + R+ A IR Y T ++
Sbjct: 1 MAGSQGGVGIYVDAANIQMNG---GFGMQYDVLREFACRTGAEPIRLNAYVTYDEQRAER 57
Query: 60 FSPLH----PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEH 115
H + G++V+ K + + + G K++ D+++AVDA QS+ L
Sbjct: 58 DRGYHQRVNNFFQSIREFGYKVIIKKYRWYRDEEGNAYAKANADLDMAVDALLQSQSLTR 117
Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
+++ +GDG F +V ALQ + +V +++ S +LRR+AD F+
Sbjct: 118 VMMVTGDGDFVQVVRALQNQGCRVELLAF-----DNISSELRREADVFV 161
>gi|320352193|ref|YP_004193532.1| hypothetical protein Despr_0047 [Desulfobulbus propionicus DSM
2032]
gi|320120695|gb|ADW16241.1| hypothetical protein Despr_0047 [Desulfobulbus propionicus DSM
2032]
Length = 258
Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats.
Identities = 39/163 (23%), Positives = 79/163 (48%), Gaps = 13/163 (7%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRS-RAIVIRAYYYTTVVGDPEQQFSPLH- 64
K A+++D N+ S G+ + Y L+ + ++++RA Y + Q+ +
Sbjct: 3 KTAIYVDAENIKMSG---GYGMRYDVLVDLANNTNSVMLRANCYLAEDHERTQRDAEYRQ 59
Query: 65 ---PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
+ L GF+++ K + F + G K++ D++LA+DA Q+ L+ +++ +G
Sbjct: 60 KVYSYHNILRQCGFKIIKKYVRRFKDEDGNITTKANADMDLAIDALLQARNLDRIILLTG 119
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
DG F L+ ALQ +V ++ + +LR AD ++
Sbjct: 120 DGDFLRLIIALQNMGCRVEVIGFHN-----VNKELREVADSYI 157
>gi|328949646|ref|YP_004366981.1| Domain of unknown function DUF88 [Marinithermus hydrothermalis DSM
14884]
gi|328449970|gb|AEB10871.1| Domain of unknown function DUF88 [Marinithermus hydrothermalis DSM
14884]
Length = 174
Score = 134 bits (337), Expect = 6e-30, Method: Composition-based stats.
Identities = 42/173 (24%), Positives = 83/173 (47%), Gaps = 12/173 (6%)
Query: 5 REKIALFIDGANLYA---SSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
++IA+F+DG+NLY S+ + +D+ + +++ + ++RAYYY + +
Sbjct: 1 MDRIAIFMDGSNLYKGLVSTLGPDYRLDFVRFIESLVAGRKLLRAYYYNAPLPSEDPASK 60
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIF 119
L++L + V ++ + E G V+ +D+++AVD + + V+
Sbjct: 61 AHQSFLNYLKRVPY-VAVRLGR--LERRGDTFVEKGVDIQIAVDMLRLAYARAYDVAVLV 117
Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
SGDG F +V +Q +V + +++S +L +QAD F L E
Sbjct: 118 SGDGDFAEVVRVVQDMGMQVENTTF----QALSSYRLAQQADRFYPLDDFSWE 166
>gi|83646130|ref|YP_434565.1| hypothetical protein HCH_03390 [Hahella chejuensis KCTC 2396]
gi|83634173|gb|ABC30140.1| uncharacterized conserved protein [Hahella chejuensis KCTC 2396]
Length = 303
Score = 133 bits (336), Expect = 8e-30, Method: Composition-based stats.
Identities = 53/168 (31%), Positives = 81/168 (48%), Gaps = 12/168 (7%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRS-RAIVIRAYYYTTVVGDPEQQ 59
M K +FID NL G +DY ++K +VIRA Y V D EQ+
Sbjct: 1 MKYDGLKAGIFIDNDNLIYGQDREG--LDYSAIIKFVEDLGMLVIRANTYMAVDEDREQK 58
Query: 60 FSPLH----PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEH 115
+ + GF+V K K++ + G K ++D+ELAVDA Q++ L++
Sbjct: 59 DAKYRQEQRKHRSDIRNAGFRVFEKPLKKYQQEDGTVYAKGNVDLELAVDALLQTDNLDY 118
Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163
+++ SGDG F+ +V+ALQ K KKV + S +L + D F
Sbjct: 119 VLLGSGDGDFSRVVSALQHKGKKVEAFAF-----DNISTELSQGVDTF 161
>gi|330984094|gb|EGH82197.1| hypothetical protein PLA107_03594 [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 282
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 48/162 (29%), Positives = 85/162 (52%), Gaps = 14/162 (8%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKA-FRSRAIVIRAYYYTTVVGDPEQQFSPL 63
E++ ++ID AN+ A+ GF++DY L + R A + Y++ ++
Sbjct: 3 MERVGVYIDQANVNANQ---GFEMDYSVLREFALRGGARGVHLNVYSSTNPAKAERDPAW 59
Query: 64 HPLLDW----LHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119
H L + G+ + K AKE+ E R VK++ DV++AVD E + L+ +++
Sbjct: 60 HSRLKAYQSQIRSMGYHINLKEAKEYGEGD-RLVVKANADVDIAVDVLESASKLDRILLV 118
Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
SGDG F++LVAA +R+ +V +++ S+QLR +D
Sbjct: 119 SGDGDFSSLVAAARRQGARVEVLAF-----DHCSEQLRGASD 155
>gi|255020942|ref|ZP_05292998.1| hypothetical protein ACA_1164 [Acidithiobacillus caldus ATCC 51756]
gi|254969733|gb|EET27239.1| hypothetical protein ACA_1164 [Acidithiobacillus caldus ATCC 51756]
Length = 336
Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 18/168 (10%)
Query: 4 PREKIALFIDGANL-YASSKALGFDIDYRKLLKAFRSRAI---VIRAYYYTTVVGD---- 55
R+ I +++D N+ Y A+ +D+ L+ F R ++R Y + +
Sbjct: 5 SRQGIGVYVDAENIRYNGGYAMRYDV-----LRRFAGRGDDARLLRLNTYMAIDEERLRR 59
Query: 56 PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEH 115
+ + G++++ K + FT+ G + K++ D++LAVD QSE L+
Sbjct: 60 DPDYRDGIRGYQQAVRDLGWKIIEKPVRWFTDEEGNRLSKANADLDLAVDVMLQSERLDQ 119
Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163
+++ +GDG F +V ALQ + +V +++ S L+ +AD F
Sbjct: 120 VLLVTGDGDFLQVVRALQNRGCRVEVLAFRN-----VSRDLQHEADAF 162
>gi|113474390|ref|YP_720451.1| hypothetical protein Tery_0526 [Trichodesmium erythraeum IMS101]
gi|110165438|gb|ABG49978.1| protein of unknown function DUF88 [Trichodesmium erythraeum IMS101]
Length = 295
Score = 131 bits (331), Expect = 3e-29, Method: Composition-based stats.
Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 13/170 (7%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
+ + L ID ANL ++K+L +DY +L + + A Y + S
Sbjct: 137 QRRTLLAIDSANLDGAAKSLNMKVDYERLKRYVNVHFGSLEARIYVGKYDNS----SRQK 192
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
++L NG+ V K + VK+++DV+LA+D E +++V+ SGDG
Sbjct: 193 LWFNYLEKNGYVVKTKPVTVYGN-----TVKANVDVDLALDIREHGVNFKNVVLCSGDGD 247
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
+ LV LQ KV +++ P + L+RQAD ++ L + EI+
Sbjct: 248 YLPLVEQLQGLGIKVIVLA----SPGHTNHFLQRQADEYISLIDIMGEIS 293
>gi|254236844|ref|ZP_04930167.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|126168775|gb|EAZ54286.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
Length = 164
Score = 131 bits (329), Expect = 6e-29, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 57/142 (40%), Gaps = 14/142 (9%)
Query: 27 DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFT 86
++Y L ++ AY Y GDP QQ L GF V K +
Sbjct: 29 HLNYAALWADIARGGSIVEAYAYAIDRGDPRQQQ-----FQQILRNLGFTVKLKPYIQRA 83
Query: 87 ENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVA-ALQRKVKKVTIVSTV 145
+ K DV + +D + + ++ +V+ SGDG F L+ ++ +V+T
Sbjct: 84 DGS----AKGDWDVGITIDVLDAAPRVDEVVLLSGDGDFDLLLEKVIRAHG----VVATA 135
Query: 146 LSDPSMASDQLRRQADYFMDLA 167
P + ++ L R A ++ +
Sbjct: 136 YGVPGLTANALIRAASRYVPIE 157
>gi|115360984|ref|YP_778121.1| hypothetical protein Bamb_6243 [Burkholderia ambifaria AMMD]
gi|115286312|gb|ABI91787.1| protein of unknown function DUF88 [Burkholderia ambifaria AMMD]
Length = 272
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 41/165 (24%), Positives = 80/165 (48%), Gaps = 13/165 (7%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLK-AFRSRAIVIRAYYYTTVVGDPE----QQ 59
++ +++DG+++ A+ L + Y L A R+ A + R + Y +
Sbjct: 4 MRRVGVYVDGSSMDANGGHL---MRYEVLRSLAGRAGATIQRLHAYLSFDERRAARSPDY 60
Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119
+ + L GF+V K + + ++ G + VKS+ D+ +A+DA +S+ L+ ++I
Sbjct: 61 DARIKGYQAALRDKGFRVTIKPLRHYADDDGTETVKSNSDLGMAIDALSESDRLDTVLIA 120
Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
+ DG F +V ALQ+K +V ++ +LR AD F+
Sbjct: 121 TSDGDFVEVVRALQKKGCRVEVLGF-----DNVPLELREAADQFI 160
>gi|67921188|ref|ZP_00514707.1| Protein of unknown function DUF88 [Crocosphaera watsonii WH 8501]
gi|67857305|gb|EAM52545.1| Protein of unknown function DUF88 [Crocosphaera watsonii WH 8501]
Length = 134
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 8/124 (6%)
Query: 57 EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHL 116
++ L W+ NG++V+AK + + K+++DVE+AVD +
Sbjct: 2 DRTNEKQQGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDLMALVGSYDTA 57
Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
+I SGDG ++ + ++ +VS SM SD L AD ++DL +K +I +
Sbjct: 58 IIVSGDGDLAYAADSVSYRGARIEVVSL----RSMTSDSLINVADRYIDLDQIKEDIQKT 113
Query: 177 PDED 180
+
Sbjct: 114 RKPN 117
>gi|319959088|gb|ADV90708.1| LabA [Nostoc linckia EC108]
Length = 127
Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 8/108 (7%)
Query: 72 YNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAA 131
NG++V+AK + + K+++DVE+AVD + + V+ SGDG V +
Sbjct: 1 RNGYRVIAKDLVQLPDGS----KKANLDVEIAVDMMALVDSYDTAVLVSGDGDLAYAVNS 56
Query: 132 LQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
+ + +V +VS SM SD L +D ++DL +K +I + P +
Sbjct: 57 VSYRGVRVEVVSL----RSMTSDSLINVSDRYIDLEAIKEDIQKTPRQ 100
>gi|288939925|ref|YP_003442165.1| hypothetical protein Alvin_0164 [Allochromatium vinosum DSM 180]
gi|288895297|gb|ADC61133.1| protein of unknown function DUF88 [Allochromatium vinosum DSM 180]
Length = 277
Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats.
Identities = 36/162 (22%), Positives = 76/162 (46%), Gaps = 13/162 (8%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAF-RSRAIVIRAYYYTTVVGDPEQQF----S 61
++ +F+D N+ + G+ + Y L + R ++ R Y + ++
Sbjct: 6 RVGVFVDAENVRYNG---GYQMRYDILRRFAAREGGVLQRLNTYMAYDAERAREDYEYKK 62
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
H + G+++ AK + +T++ G K++ D+++AVDA Q+ L+ +++ +G
Sbjct: 63 KAHAYQQMVRDFGWKITAKTVRRYTDDNGNVTTKANADLDMAVDAMLQANRLDQVLLVTG 122
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163
DG F +V ALQ +V ++ S L+++ D F
Sbjct: 123 DGDFLQVVEALQNTGCRVELIGF-----KNVSRLLQQRVDAF 159
>gi|198282948|ref|YP_002219269.1| hypothetical protein Lferr_0812 [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218667530|ref|YP_002425151.1| hypothetical protein AFE_0663 [Acidithiobacillus ferrooxidans ATCC
23270]
gi|198247469|gb|ACH83062.1| protein of unknown function DUF88 [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218519743|gb|ACK80329.1| conserved hypothetical protein [Acidithiobacillus ferrooxidans ATCC
23270]
Length = 318
Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats.
Identities = 40/164 (24%), Positives = 77/164 (46%), Gaps = 14/164 (8%)
Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAF--RSRAIVIRAYYYTTVVGD----PEQQFS 61
I +++D N+ + G+ + Y L + A ++R Y V G+ +
Sbjct: 8 IGVYVDAENIRYNG---GYAMRYDVLRRFAGREEEARLLRLNTYMAVDGERMKRDREYRE 64
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
+ + G++++ K + F + G K++ D++LAVD QSE L+ +++ +G
Sbjct: 65 RIRGYQQAVRDLGWKIIEKPVRWFVDEEGNSMSKANADLDLAVDVMLQSERLDQVLLVTG 124
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165
DG F +V ALQ K +V +++ S +L+ +AD F
Sbjct: 125 DGDFLQVVRALQNKGCRVEVLAFRN-----VSRELQYEADAFYP 163
>gi|254787275|ref|YP_003074704.1| hypothetical protein TERTU_3357 [Teredinibacter turnerae T7901]
gi|237685617|gb|ACR12881.1| conserved hypothetical protein [Teredinibacter turnerae T7901]
Length = 258
Score = 127 bits (321), Expect = 5e-28, Method: Composition-based stats.
Identities = 58/182 (31%), Positives = 89/182 (48%), Gaps = 15/182 (8%)
Query: 7 KIALFIDGANLYASSKALGFDID-YRKLLKAFRSRAIVIRAYYYTTVVGDPE----QQFS 61
K +F+D NL + G D RKL++A V+RA Y V E +
Sbjct: 3 KAGIFLDMENLNMNG-GWGMRFDVIRKLVEA--QGTTVLRANVYIAVDNAREKYDFEYRE 59
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
D + GF +V K + FT G + +K++ D++LAVDA Q+E L+++++ +G
Sbjct: 60 KAQARRDKMRLAGFHIVEKEIRRFTNADGTQNIKANADLDLAVDAMLQAENLDYILLGTG 119
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN--EIARDPDE 179
DG F LV ALQ K K+V V+ S +LRR+ DY+ A + I DP +
Sbjct: 120 DGDFLRLVRALQSKGKRVDAVAIHN-----VSGELRREVDYYFHGATIPGLLPIKNDPKK 174
Query: 180 DK 181
+
Sbjct: 175 IR 176
>gi|126655888|ref|ZP_01727327.1| hypothetical protein CY0110_19792 [Cyanothece sp. CCY0110]
gi|126623367|gb|EAZ94072.1| hypothetical protein CY0110_19792 [Cyanothece sp. CCY0110]
Length = 103
Score = 124 bits (313), Expect = 4e-27, Method: Composition-based stats.
Identities = 34/105 (32%), Positives = 59/105 (56%), Gaps = 5/105 (4%)
Query: 73 NGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAA 131
G+ V K+ KE+ ++ GR K+++D+E+ VD F E + +++FSGDG F +
Sbjct: 1 MGYTVRTKILKEYYDDTSGRYSQKANLDIEIVVDMFNTVEQYDRVILFSGDGDFERAIEL 60
Query: 132 LQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
L+ K +T+VST M + +LR D ++DL +K+ I +
Sbjct: 61 LRSKNTHITVVST----EGMIARELRNATDRYIDLNDIKDSIEKQ 101
>gi|297623823|ref|YP_003705257.1| hypothetical protein Trad_1595 [Truepera radiovictrix DSM 17093]
gi|297165003|gb|ADI14714.1| protein of unknown function DUF88 [Truepera radiovictrix DSM 17093]
Length = 173
Score = 116 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 75/170 (44%), Gaps = 12/170 (7%)
Query: 6 EKIALFIDGANLYASSKAL--GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP--EQQFS 61
E++A+FIDG+NLY + G ++ ++ + + ++R YYY + D ++
Sbjct: 3 ERVAVFIDGSNLYNGMRDNLTGTRVNLQEFVAQLVCKRHLVRTYYYNAPLTDDYDTERRE 62
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIF 119
+ L + V ++ + G K +DV +AV++ + + +++
Sbjct: 63 GQQRFFESLSRIPY-VTVRLGRLHRRFDGTLVEKG-VDVAIAVESLSLAYENAYDTVLLV 120
Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
SGDG + LV A++RK K V ++ L AD F L L
Sbjct: 121 SGDGDYVQLVEAIKRKGKHVECAMFRNQ----SAGVLIEYADVFHPLDDL 166
>gi|300087254|ref|YP_003757776.1| hypothetical protein Dehly_0124 [Dehalogenimonas
lykanthroporepellens BL-DC-9]
gi|299526987|gb|ADJ25455.1| protein of unknown function DUF88 [Dehalogenimonas
lykanthroporepellens BL-DC-9]
Length = 227
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 40/174 (22%), Positives = 67/174 (38%), Gaps = 10/174 (5%)
Query: 1 MFDPREKIALFIDGANLYASSKAL--GFDIDYRKLLKAFRSRAIVIRAYYYTTVVG--DP 56
M + +++ +FIDG+N+Y S KA DID K +IR YYY VG +
Sbjct: 1 MAERDDRVMIFIDGSNMYHSLKAHWHRSDIDLSKFCAKLVGERRLIRIYYYNVEVGQREE 60
Query: 57 EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQ--SEGL 113
+++ D + + + +T + +DV LA D
Sbjct: 61 PERYKDQKVFFDSVEAMPYTELRLGRLVYTSGWPNTPPFEKGVDVMLATDMLTHCFKNNY 120
Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
++ +GD F + A++ K V + S LR+ AD D+
Sbjct: 121 NTAILVAGDADFVGALQAVKDYGKHVEVALF---GEEGTSVPLRKVADVVHDID 171
>gi|254417286|ref|ZP_05031030.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
gi|196175939|gb|EDX70959.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
Length = 110
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 34/103 (33%), Positives = 62/103 (60%), Gaps = 8/103 (7%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ + R ++A+FIDG+NL+ ++ LG +IDY KLL + + ++R+++YT V E+Q
Sbjct: 16 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLVRLTAGSRLLRSFFYTGVDRTNEKQ- 74
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELA 103
L W+ NG++V+AK + + K+++DVE+A
Sbjct: 75 ---QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIA 110
>gi|330952960|gb|EGH53220.1| hypothetical protein PSYCIT7_16619 [Pseudomonas syringae Cit 7]
Length = 117
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 50/123 (40%), Gaps = 12/123 (9%)
Query: 45 RAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAV 104
A+ Y GD +QQ L GF V K + ++ K DV + +
Sbjct: 1 HAFAYAIDRGDSKQQQ-----FQQILRNLGFTVRLKPYIQRSDGS----AKGDWDVGITI 51
Query: 105 DAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
D + + ++ +V+ SGDG F L+ + K + + P + ++ L R A ++
Sbjct: 52 DIMDFAPQVDEIVLASGDGDFDMLLERVISK---HGVEAVAYGVPGLTANSLIRAASRYV 108
Query: 165 DLA 167
+
Sbjct: 109 PIE 111
>gi|73748197|ref|YP_307436.1| hypothetical protein cbdb_A289 [Dehalococcoides sp. CBDB1]
gi|147668972|ref|YP_001213790.1| hypothetical protein DehaBAV1_0326 [Dehalococcoides sp. BAV1]
gi|289432247|ref|YP_003462120.1| hypothetical protein DehalGT_0297 [Dehalococcoides sp. GT]
gi|73659913|emb|CAI82520.1| conserved hypothetical protein [Dehalococcoides sp. CBDB1]
gi|146269920|gb|ABQ16912.1| protein of unknown function DUF88 [Dehalococcoides sp. BAV1]
gi|288945967|gb|ADC73664.1| protein of unknown function DUF88 [Dehalococcoides sp. GT]
Length = 194
Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats.
Identities = 36/170 (21%), Positives = 68/170 (40%), Gaps = 9/170 (5%)
Query: 1 MFDPREKIALFIDGANLYASSKAL--GFDIDYRKLLKAFRSRAIVIRAYYYTTVVG--DP 56
M D E++ +FIDG+N+Y K+ DID+ ++R YYY VG +
Sbjct: 1 MTDTLERVMIFIDGSNMYHYLKSHFQRTDIDFGCFCSKIAGHRRLVRIYYYNAEVGRKEE 60
Query: 57 EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLE 114
++F+ L + + ++ + +DV L+ D +
Sbjct: 61 PERFNDQKKFFTSLEKIPYMELRLGRLVYSGWPATPPYEKGVDVLLSTDMLSHGFKNNFD 120
Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
++ +GD F + + A++ K V + S +LR+ AD +
Sbjct: 121 TAILVAGDSDFVSALQAVKDNGKNVEVALF---GKESTSVELRKVADKII 167
>gi|270307718|ref|YP_003329776.1| hypothetical protein DhcVS_287 [Dehalococcoides sp. VS]
gi|270153610|gb|ACZ61448.1| hypothetical protein DhcVS_287 [Dehalococcoides sp. VS]
Length = 194
Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats.
Identities = 37/170 (21%), Positives = 69/170 (40%), Gaps = 9/170 (5%)
Query: 1 MFDPREKIALFIDGANLYASSKAL--GFDIDYRKLLKAFRSRAIVIRAYYYTTVVG--DP 56
M D E++ +FIDG+N+Y K+ DID+ R ++R YYY VG +
Sbjct: 1 MTDTLERVMIFIDGSNMYHYLKSHFQRTDIDFGCFCSKIAGRRRLVRIYYYNAEVGRKEE 60
Query: 57 EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLE 114
++F+ L + + ++ + +DV L+ D +
Sbjct: 61 PERFNDQRKFFTSLEKISYMELRLGRLVYSGWPSTPPYEKGVDVLLSTDMLSHGFKNNFD 120
Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
++ +GD F + + A++ K V + S +LR+ AD +
Sbjct: 121 TAILVAGDSDFVSALQAVKDNGKNVEVALF---GKERTSMELRKVADKII 167
>gi|282895639|ref|ZP_06303764.1| hypothetical protein CRD_00263 [Raphidiopsis brookii D9]
gi|281199333|gb|EFA74198.1| hypothetical protein CRD_00263 [Raphidiopsis brookii D9]
Length = 96
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 96 SSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQ 155
+++VE+AVD + + V+ SGDG V A+ +V ++ +M SD
Sbjct: 5 PNLNVEIAVDMITLAPYYDTAVLVSGDGDLAYAVNAVTSLGSRVEVI----GLQTMTSDS 60
Query: 156 LRRQADYFMDLAYLKNEIARD 176
L ADYF+D +K I +D
Sbjct: 61 LIDVADYFIDFDSIKQYIQKD 81
>gi|57234893|ref|YP_181094.1| hypothetical protein DET0347 [Dehalococcoides ethenogenes 195]
gi|57225341|gb|AAW40398.1| conserved hypothetical protein [Dehalococcoides ethenogenes 195]
Length = 194
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 36/173 (20%), Positives = 69/173 (39%), Gaps = 9/173 (5%)
Query: 1 MFDPREKIALFIDGANLYASSKAL--GFDIDYRKLLKAFRSRAIVIRAYYYTTVVG--DP 56
M D E++ +FIDG+N+Y K+ DID+ R ++R YYY VG +
Sbjct: 1 MTDTLERVMIFIDGSNMYHYLKSHFQRTDIDFGCFCSKIAGRRRLVRIYYYNAEVGRKEE 60
Query: 57 EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLE 114
++F+ + + ++ + +DV L+ D +
Sbjct: 61 PERFNDQKKFFSSPEKISYMELRLGRLVYSGWPSTPPYEKGVDVLLSTDMLSHGFKNNFD 120
Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
++ +GD F + + A++ K V + S +LR+ AD + +
Sbjct: 121 TAILVAGDSDFVSALQAVKDNGKNVEVALF---GKETTSMELRKVADKTITID 170
>gi|196234013|ref|ZP_03132849.1| protein of unknown function DUF88 [Chthoniobacter flavus Ellin428]
gi|196221952|gb|EDY16486.1| protein of unknown function DUF88 [Chthoniobacter flavus Ellin428]
Length = 180
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 36/171 (21%), Positives = 76/171 (44%), Gaps = 13/171 (7%)
Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ---QF 60
P+ ++ + +D +N+ +++K +D+ KL + ++ Y + + +
Sbjct: 10 PQRRVLILVDESNVTSAAKVTNRKLDWLKLRDHLVNGRELLEMVVYVGLPPAMPEWQAER 69
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGL--EHLVI 118
+ + WL NGF VV+K K+++DV +A+D E S + + +++
Sbjct: 70 DKKNKFVFWLRSNGFLVVSKD----GSPADESHYKANVDVLMAIDGVELSTEMQPDVVIL 125
Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
+GD F L L+R+ +V S + + L+ A+ +DL L
Sbjct: 126 VTGDADFAELALRLRRRGIRVEAASVAHTLGA----GLKTSANGIIDLGPL 172
>gi|108802863|ref|YP_642800.1| hypothetical protein Rxyl_0007 [Rubrobacter xylanophilus DSM 9941]
gi|108764106|gb|ABG02988.1| protein of unknown function DUF88 [Rubrobacter xylanophilus DSM
9941]
Length = 487
Score = 99.8 bits (248), Expect = 1e-19, Method: Composition-based stats.
Identities = 44/168 (26%), Positives = 71/168 (42%), Gaps = 14/168 (8%)
Query: 6 EKIALFIDGANLY-ASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
E +A+FID N+Y ++ G + +L+ R ++ A Y + P
Sbjct: 102 EDLAIFIDWENIYISTVSEYGAKPNVSAILEKAREYGRIVSATAYADWTDGEFRDAPPT- 160
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAV---DAFEQSEGLEHLVIFSG 121
L+ NG A+ F +KR +S+DV LAV D ++ V+ +G
Sbjct: 161 -----LYSNGISPRYISARYFPGGKSQKRRTNSIDVMLAVECVDFLHNHPQVDTYVLVTG 215
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
DG F LV L+ + K V ++ + S L AD+F+ A L
Sbjct: 216 DGDFIPLVNLLRSRGKVVVVIGVSEA----TSYHLIESADHFISYASL 259
>gi|282895638|ref|ZP_06303763.1| Protein of unknown function DUF88 [Raphidiopsis brookii D9]
gi|281199332|gb|EFA74197.1| Protein of unknown function DUF88 [Raphidiopsis brookii D9]
Length = 156
Score = 97.9 bits (243), Expect = 5e-19, Method: Composition-based stats.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
R ++A+FIDG NL+ ++ +G +IDY KLL + ++RA++YT V E+Q
Sbjct: 55 NRGRVAIFIDGLNLFHAALQIGIEIDYVKLLCRLTQTSRLLRAFFYTGVDTSKEKQ---- 110
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKR 93
L W+ NG++VV K TEN + +
Sbjct: 111 QGFLLWMRRNGYRVVTKDIIALTENGKKPK 140
>gi|148657548|ref|YP_001277753.1| hypothetical protein RoseRS_3445 [Roseiflexus sp. RS-1]
gi|148569658|gb|ABQ91803.1| protein of unknown function DUF88 [Roseiflexus sp. RS-1]
Length = 842
Score = 90.6 bits (224), Expect = 9e-17, Method: Composition-based stats.
Identities = 40/168 (23%), Positives = 75/168 (44%), Gaps = 18/168 (10%)
Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
+PR +A+FID N+Y S + L + ++ ++ V+ A Y +
Sbjct: 36 NPRLDVAVFIDFENVYVSVRDKLDVNPNFEIIMDRVADLGRVVIARAYA--------DWY 87
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGR--KRVKSSMDVELAVDAFEQS---EGLEHL 116
+ L+ NG + + + + GR + +K+S+D+ L +DA + +
Sbjct: 88 RYPRVTSALYANGIEPMYVPTYYYDRDLGRTGRAIKNSVDMNLCIDAMKTLYTNPNIAKF 147
Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
V+ +GD F LV A+++ K+V I+ AS L + AD F+
Sbjct: 148 VLATGDRDFIPLVNAIRQHGKEVIII----GVGGAASGHLAQSADEFI 191
>gi|156744317|ref|YP_001434446.1| hypothetical protein Rcas_4412 [Roseiflexus castenholzii DSM 13941]
gi|156235645|gb|ABU60428.1| protein of unknown function DUF88 [Roseiflexus castenholzii DSM
13941]
Length = 787
Score = 89.0 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 40/168 (23%), Positives = 75/168 (44%), Gaps = 18/168 (10%)
Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
+PR +A+FID N+Y S + L + ++ ++ V+ A Y +
Sbjct: 5 NPRLDVAVFIDFENVYVSVRDKLDVNPNFEIIMDRVADLGRVVIARAYA--------DWY 56
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGR--KRVKSSMDVELAVDAFEQS---EGLEHL 116
+ L+ NG + + + + GR + +K+S+D+ L +DA + +
Sbjct: 57 RYPRVTSALYANGIEPMYVPTYYYDRDLGRTGRAIKNSVDMNLCIDAMKTLYTNPNIGKF 116
Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
V+ +GD F LV A+++ K+V I+ AS L + AD F+
Sbjct: 117 VLATGDRDFIPLVNAIRQHGKEVIII----GVGGAASGHLAQSADEFI 160
>gi|219850544|ref|YP_002464977.1| hypothetical protein Cagg_3705 [Chloroflexus aggregans DSM 9485]
gi|219544803|gb|ACL26541.1| protein of unknown function DUF88 [Chloroflexus aggregans DSM 9485]
Length = 600
Score = 88.6 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 42/185 (22%), Positives = 80/185 (43%), Gaps = 22/185 (11%)
Query: 1 MFD-PREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58
M+D R +A+FID N+Y S + L ++ ++ V+ + Y
Sbjct: 1 MYDQKRPDVAVFIDFENIYVSVRDKLNATPNFEAIMDRCNDLGRVVISRAYA-------- 52
Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGR--KRVKSSMDVELAVDAFEQS---EGL 113
+ + L+ N + + + ++ GR + +K+S+D+ L +DA + +
Sbjct: 53 DWYRYPRITSALYANAIEPIYVATYYYDKDAGRTGRAIKNSVDMNLCIDAMKTLYTNPNI 112
Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
V+ +GD F LV ++++ K+V I+ AS L + AD F+ L I
Sbjct: 113 SRFVLVTGDRDFIPLVHSIRQHGKEVYII----GIGGAASTHLAQSADEFVFYEQL---I 165
Query: 174 ARDPD 178
R P+
Sbjct: 166 GRQPN 170
>gi|163848259|ref|YP_001636303.1| hypothetical protein Caur_2709 [Chloroflexus aurantiacus J-10-fl]
gi|163669548|gb|ABY35914.1| protein of unknown function DUF88 [Chloroflexus aurantiacus
J-10-fl]
Length = 669
Score = 87.9 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 42/184 (22%), Positives = 79/184 (42%), Gaps = 22/184 (11%)
Query: 1 MFD-PREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58
M+D R +A+FID N+Y S + L ++ ++ V+ + Y
Sbjct: 18 MYDQKRPDVAVFIDFENIYVSVRDKLNATPNFEAIMDRCNDLGRVVISRAYA-------- 69
Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGR--KRVKSSMDVELAVDAFEQS---EGL 113
+ + L+ N + + + ++ GR + +K+S+D+ L +DA + +
Sbjct: 70 DWYRYPRITSALYANAIEPIYVATYYYDKDAGRTGRAIKNSVDMNLCIDAMKTLYTNPNV 129
Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
V+ +GD F LV ++++ K+V I+ AS L + AD F+ L I
Sbjct: 130 ARFVLVTGDRDFIPLVHSIRQHGKEVYII----GIGGAASTHLAQSADEFVFYEQL---I 182
Query: 174 ARDP 177
R P
Sbjct: 183 GRQP 186
>gi|149917268|ref|ZP_01905767.1| hypothetical protein PPSIR1_40335 [Plesiocystis pacifica SIR-1]
gi|149821875|gb|EDM81269.1| hypothetical protein PPSIR1_40335 [Plesiocystis pacifica SIR-1]
Length = 474
Score = 87.9 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 45/174 (25%), Positives = 72/174 (41%), Gaps = 24/174 (13%)
Query: 5 REKIALFIDGANLYA----SSKALGF-DI--DYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
++IA+FID NL + + G DI D +L++ R +I A Y +
Sbjct: 4 NDRIAMFIDFENLVYGLENTEQHEGRADIALDVERLVRFARDEGRLIVARAYA------D 57
Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEH 115
+ + + L+ G + + + + VK+S+DV LAVDA E +
Sbjct: 58 WRSASVRQHQRDLYVQGIEPINVLGRRHGSE-----VKNSVDVALAVDAVESLFERDYDT 112
Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
V+ SGD F L+ ++ K+V VS AS L D F+ L
Sbjct: 113 FVLISGDRDFLPLLRCIRSHGKRVVGVS----VRESASRDLPNLCDRFVFYRDL 162
>gi|222526169|ref|YP_002570640.1| hypothetical protein Chy400_2928 [Chloroflexus sp. Y-400-fl]
gi|222450048|gb|ACM54314.1| protein of unknown function DUF88 [Chloroflexus sp. Y-400-fl]
Length = 652
Score = 87.1 bits (215), Expect = 8e-16, Method: Composition-based stats.
Identities = 42/184 (22%), Positives = 79/184 (42%), Gaps = 22/184 (11%)
Query: 1 MFD-PREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58
M+D R +A+FID N+Y S + L ++ ++ V+ + Y
Sbjct: 1 MYDQKRPDVAVFIDFENIYVSVRDKLNATPNFEAIMDRCNDLGRVVISRAYA-------- 52
Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGR--KRVKSSMDVELAVDAFEQS---EGL 113
+ + L+ N + + + ++ GR + +K+S+D+ L +DA + +
Sbjct: 53 DWYRYPRITSALYANAIEPIYVATYYYDKDAGRTGRAIKNSVDMNLCIDAMKTLYTNPNV 112
Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
V+ +GD F LV ++++ K+V I+ AS L + AD F+ L I
Sbjct: 113 ARFVLVTGDRDFIPLVHSIRQHGKEVYII----GIGGAASTHLAQSADEFVFYEQL---I 165
Query: 174 ARDP 177
R P
Sbjct: 166 GRQP 169
>gi|134298416|ref|YP_001111912.1| hypothetical protein Dred_0543 [Desulfotomaculum reducens MI-1]
gi|134051116|gb|ABO49087.1| protein of unknown function DUF88 [Desulfotomaculum reducens MI-1]
Length = 180
Score = 87.1 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 41/182 (22%), Positives = 71/182 (39%), Gaps = 32/182 (17%)
Query: 5 REKIALFIDGAN-------LYASSKALGFDIDYRKLLKAFR--SRAIVIRAYYYTTVVGD 55
+++ +FIDG N LY+ S+ IDY KL + R YYYT +
Sbjct: 1 MKRVMVFIDGNNFEKAVTNLYSGSQQ---RIDYSKLANYLAGKRNGNLQRLYYYTAASNN 57
Query: 56 PEQQFSPLHPLLDWLHY--------NGF-QVVAKVAKEFTENCGRKRVKSSMDVELAVDA 106
+Q+ + +D L+ G+ QVV K A + + DV +AVD
Sbjct: 58 DKQKAASTKNFVDTLNKQVPNCIAKIGYLQVVGKDA-----SGQDIYTEKGTDVNIAVDL 112
Query: 107 FEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
+ + ++ S D + V +++ K V ++ V + L+ D +
Sbjct: 113 VSLAFFNAYDEAILLSADTDYEPAVNMVRQFGKTV-VLGIVDRQK---AGYLKGLCDDHI 168
Query: 165 DL 166
L
Sbjct: 169 SL 170
>gi|320103701|ref|YP_004179292.1| hypothetical protein Isop_2164 [Isosphaera pallida ATCC 43644]
gi|319750983|gb|ADV62743.1| hypothetical protein Isop_2164 [Isosphaera pallida ATCC 43644]
Length = 294
Score = 87.1 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 42/178 (23%), Positives = 68/178 (38%), Gaps = 31/178 (17%)
Query: 3 DPREKIALFIDGANL---YASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
+ +A+F+D NL + + K F+I K+L+ + +I Y
Sbjct: 5 EHDRNLAVFVDLENLAMGFQNQKKARFEI--HKVLERLVEKGKLIVKKAYA--------- 53
Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRV--KSSMDVELAVDAFEQS---EGLE 114
DW Y + A R+ K+S D+ L VDA + + ++
Sbjct: 54 --------DWNRYQAYTAPFHEAAIELIEIPRRSQTGKNSADIRLVVDAMDLAWSKPHVD 105
Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
VI SGD F+ LV+ L+ K V L S+ LR D F+ L+ +
Sbjct: 106 TFVIVSGDSDFSPLVSKLKENGKHV----IGLGMKGSTSELLRDNCDEFIYYEDLERQ 159
>gi|85859964|ref|YP_462166.1| putative cytoplasmic protein [Syntrophus aciditrophicus SB]
gi|85723055|gb|ABC77998.1| hypothetical cytosolic protein [Syntrophus aciditrophicus SB]
Length = 196
Score = 86.3 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 42/177 (23%), Positives = 78/177 (44%), Gaps = 28/177 (15%)
Query: 7 KIALFIDGANL---YASSKA---LGFDIDYRK---LLKAFRS-----RAIVIRAYYYTTV 52
+ +F+DG NL Y + A +D+ + + F + VIR YYYT V
Sbjct: 16 RAMVFVDGENLAIRYKAGLADAPPEKHVDFLQDVYVWSHFANIPYHVHCDVIRKYYYTAV 75
Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG 112
GD + + + L G + + F + GR + +D+ +A + +
Sbjct: 76 QGDDPK----IEDVETQLKNIGIEA----PRVFKKKKGRPTKR--VDITIATEMLTHAHR 125
Query: 113 --LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
+ ++ +GD + LV A+Q + ++V ++ DP + S +L ADYF D++
Sbjct: 126 GNYDIAILVAGDEDYVPLVKAVQDEGRRV-VLWFFEGDPGL-SKKLEMAADYFFDIS 180
>gi|171315862|ref|ZP_02905092.1| protein of unknown function DUF88 [Burkholderia ambifaria MEX-5]
gi|171098958|gb|EDT43746.1| protein of unknown function DUF88 [Burkholderia ambifaria MEX-5]
Length = 131
Score = 85.9 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 5/113 (4%)
Query: 28 IDYRKLLK-AFRSRAIVIRAYYYTTVVGDPE----QQFSPLHPLLDWLHYNGFQVVAKVA 82
+ Y L A R+ A + R + Y + + + L GF+V K
Sbjct: 9 MRYEVLRSLAGRAGATIQRLHAYLSFDERRAARSPDYDARIKGYQAALRDKGFRVTIKPL 68
Query: 83 KEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRK 135
+ + + G + VKS+ D+ +A+DA +S+ L+ ++I + DG F +V ALQ+K
Sbjct: 69 RHYADEDGTETVKSNSDLGMAIDALSESDRLDTVLIATSDGDFVEVVRALQKK 121
>gi|323701153|ref|ZP_08112828.1| protein of unknown function DUF88 [Desulfotomaculum nigrificans DSM
574]
gi|323533755|gb|EGB23619.1| protein of unknown function DUF88 [Desulfotomaculum nigrificans DSM
574]
Length = 180
Score = 85.9 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 39/179 (21%), Positives = 67/179 (37%), Gaps = 26/179 (14%)
Query: 5 REKIALFIDGANLYASSKAL----GFDIDYRKLLKAFR--SRAIVIRAYYYTTVVGDPEQ 58
+++ +FIDG N + L IDY KL + R YYYT + +Q
Sbjct: 1 MKRVMVFIDGNNFEKAVTNLYGGSQQRIDYSKLANYLAGKRNGNLQRLYYYTAASDNDKQ 60
Query: 59 QFSPLHPLLDWLHY--------NGF-QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ 109
+ + +D L+ G+ QVV K A + + DV +AVD
Sbjct: 61 KAASTKHFVDTLNKQVPNCIAKIGYLQVVGKDA-----SGQDIYTEKGTDVNIAVDLVSL 115
Query: 110 S--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
+ + ++ S D + V ++ K V ++ V + L+ D + L
Sbjct: 116 AFFNAYDEAILLSADTDYEPAVNMARQLGKTV-VLGIVDRQK---AGYLKGLCDDHISL 170
>gi|168703228|ref|ZP_02735505.1| hypothetical protein GobsU_27096 [Gemmata obscuriglobus UQM 2246]
Length = 532
Score = 84.8 bits (209), Expect = 4e-15, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 68/170 (40%), Gaps = 32/170 (18%)
Query: 8 IALFIDGANLYASSKALGFD-----IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
+A+FID N+ LGF+ + K+L+ + ++ Y +S
Sbjct: 13 LAVFIDFENM-----GLGFNNRRDRFEISKVLERLVEKGKIVCKKAYA--------DWSR 59
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIF 119
LH + +++ + T K+S D+ L VDA + + + ++ VI
Sbjct: 60 FGMYTGALHESAIELIEIPRRGMT-------GKNSADIRLVVDAIDLAYSKDHIDTFVIV 112
Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
SGD F+ LV+ L+ K V L SD LR D F+ L
Sbjct: 113 SGDSDFSPLVSKLKELGKHV----IGLGLSDATSDLLRDNCDEFIYYEDL 158
>gi|254417374|ref|ZP_05031116.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
gi|196175809|gb|EDX70831.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
Length = 99
Score = 84.8 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 98 MDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLR 157
+DVELA+D E ++ + ++ SGDG F + +Q+ ++V +VS + S +L
Sbjct: 25 LDVELALDLVELADTYDTAILVSGDGDFVPAIERIQQLSRRVEVVS----YRATTSQKLM 80
Query: 158 RQADYFMDLAY 168
+ AD +++L
Sbjct: 81 QLADNYLNLET 91
>gi|330955890|gb|EGH56150.1| hypothetical protein PSYCIT7_32171 [Pseudomonas syringae Cit 7]
Length = 82
Score = 84.0 bits (207), Expect = 8e-15, Method: Composition-based stats.
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 6/87 (6%)
Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+KIA+F D NLY + + A G +Y L R ++ A+ Y GD +QQ
Sbjct: 1 MKKIAVFADVQNLYYTVRQAHGCHFNYAALWADISKRGEIVHAFAYAIDRGDSKQQQ--- 57
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCG 90
L GF V K + ++
Sbjct: 58 --FQQILRNLGFTVRLKPYIQRSDGSA 82
>gi|309789837|ref|ZP_07684416.1| hypothetical protein OSCT_0367 [Oscillochloris trichoides DG6]
gi|308228141|gb|EFO81790.1| hypothetical protein OSCT_0367 [Oscillochloris trichoides DG6]
Length = 635
Score = 82.5 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/185 (20%), Positives = 80/185 (43%), Gaps = 23/185 (12%)
Query: 1 MFDPREK--IALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
M ++ +A+FID N+Y S + L + ++ ++ V+ + Y
Sbjct: 1 MSYENKRPDVAVFIDFENVYVSVRDKLNANPNFEAIMDRCGDLGRVVISRAYA------- 53
Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGR--KRVKSSMDVELAVDAFEQS---EG 112
+ + L+ N + + + ++ GR + +K+S+D+ L +DA +
Sbjct: 54 -DWYRYPRVTSALYANAIEPIYVATYYYDKDMGRTGRAIKNSVDMNLCIDAMKTLFTNTN 112
Query: 113 LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
+ V+ +GD F LV +++++ K+V I+ AS L + AD F+ L
Sbjct: 113 ISRFVLVTGDRDFIPLVNSIRQQGKEVYII----GIGGAASTHLAQSADEFVFYEQL--- 165
Query: 173 IARDP 177
+ + P
Sbjct: 166 VGKQP 170
>gi|269925423|ref|YP_003322046.1| protein of unknown function DUF88 [Thermobaculum terrenum ATCC
BAA-798]
gi|269789083|gb|ACZ41224.1| protein of unknown function DUF88 [Thermobaculum terrenum ATCC
BAA-798]
Length = 408
Score = 82.5 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 47/190 (24%), Positives = 81/190 (42%), Gaps = 21/190 (11%)
Query: 2 FDPREKIALFIDGANLYASSKALGFDI-DYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
F + +AL+ID N+ S + + L +A V+ A Y Q
Sbjct: 14 FLHQNDVALYIDWENIKYSLWNKDSRVPNATALKEAASKFGRVVVARAYANWQEHQHQLD 73
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRK---RVKSSMDVELAVDAFEQS---EGLE 114
+ L+ G + + + +T K R K+S+DV+L VDA + +
Sbjct: 74 P------NDLYSAGIEPIYVPTRTYTSTDAVKTNNRRKNSVDVKLTVDAVDFCLSNPNIH 127
Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF----MDLAYLK 170
V+ +GDG F LV AL+ + ++V ++ S S QL ADYF +++ +
Sbjct: 128 TFVLVTGDGDFIHLVNALRSRGREVVVIGCSWS----TSWQLTSMADYFIPYDIEVDPIY 183
Query: 171 NEIARDPDED 180
+++ D ED
Sbjct: 184 DKVGEDNTED 193
>gi|159899759|ref|YP_001546006.1| hypothetical protein Haur_3241 [Herpetosiphon aurantiacus ATCC
23779]
gi|159892798|gb|ABX05878.1| protein of unknown function DUF88 [Herpetosiphon aurantiacus ATCC
23779]
Length = 789
Score = 80.9 bits (199), Expect = 6e-14, Method: Composition-based stats.
Identities = 39/187 (20%), Positives = 75/187 (40%), Gaps = 27/187 (14%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDID----YRKLLKAFRSRAIVIRAYYYTTVVGDP 56
M P++ +A+FID N+Y S + D + L++ V+ A Y
Sbjct: 29 MNKPKQDVAVFIDFENIYVSVRE---KFDATPNFEALMERCEDYGRVVVARAYA------ 79
Query: 57 EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGR--KRVKSSMDVELAVDAFEQS---E 111
+ + L N + + + ++ GR + +K+S+D+ + +DA
Sbjct: 80 --DWYRYPRITSALFANNIEPMYVPTYYYDKDEGRMGRPIKNSVDMHMCIDAMRTLYTRT 137
Query: 112 GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM---DLAY 168
+ + +GD F LV ++++ K V IV AS L + AD F+ +
Sbjct: 138 NIGSYIFITGDRDFIALVNCVRQEGKDVIIV----GIGGAASSHLAQSADEFLFYEQIVD 193
Query: 169 LKNEIAR 175
++ R
Sbjct: 194 IRPMGGR 200
>gi|258593302|emb|CBE69641.1| conserved protein of unknown function [NC10 bacterium 'Dutch
sediment']
Length = 251
Score = 80.9 bits (199), Expect = 7e-14, Method: Composition-based stats.
Identities = 42/179 (23%), Positives = 70/179 (39%), Gaps = 23/179 (12%)
Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
+ +++ALFID N+ K A + +L+ + ++ Y +
Sbjct: 2 NEEKRLALFIDFENIAIGIKEAKHKQFEIGLVLERLVEKGKIMVKRAYA--------DWG 53
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVI 118
LH +++ K R K+S D+ LAVDA + + E L+ VI
Sbjct: 54 RYAEHKRALHEAAIELIDIPQK-------RISGKNSADIRLAVDAMDMAYSKEHLDTFVI 106
Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
SGD F+ LV+ L+ K+V L + S+ L D F+ L + P
Sbjct: 107 VSGDSDFSPLVSKLRENNKEV----IGLGVKNSVSELLVDNCDEFIYYEDLIRHPKKAP 161
>gi|254417369|ref|ZP_05031111.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
gi|196175804|gb|EDX70826.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
Length = 302
Score = 80.2 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 7 KIALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
++A+FID AN+Y S+ LGFD DY LL + + +A++YT + QQ
Sbjct: 187 RVAIFIDAANIYHSALQLGFDPPDYADLLAFLKRQYSSYQAFFYTGLDSTNRQQ----KR 242
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSM 98
LL L G+++++K + + K+++
Sbjct: 243 LLFRLQNLGYKIISKEIIKRADGS----CKANL 271
>gi|114764533|ref|ZP_01443758.1| hypothetical protein 1100011001295_R2601_11629 [Pelagibaca
bermudensis HTCC2601]
gi|114543100|gb|EAU46119.1| hypothetical protein R2601_11629 [Roseovarius sp. HTCC2601]
Length = 60
Score = 79.8 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 45/59 (76%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + E +
Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFVRRGKMVRAFYYTALLENDEYR 59
>gi|163845962|ref|YP_001634006.1| hypothetical protein Caur_0367 [Chloroflexus aurantiacus J-10-fl]
gi|222523687|ref|YP_002568157.1| hypothetical protein Chy400_0393 [Chloroflexus sp. Y-400-fl]
gi|163667251|gb|ABY33617.1| protein of unknown function DUF88 [Chloroflexus aurantiacus
J-10-fl]
gi|222447566|gb|ACM51832.1| protein of unknown function DUF88 [Chloroflexus sp. Y-400-fl]
Length = 208
Score = 79.8 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 39/175 (22%), Positives = 70/175 (40%), Gaps = 27/175 (15%)
Query: 7 KIALFIDGANL------YASSKALGF--DIDYRKLLKAFRSRAI-------VIRAYYYTT 51
+I +F DG+ + S K +G+ + + +L++ F S V+ A ++
Sbjct: 6 RIGVFYDGSYFTYAQFYFYSEKKVGWLSFVPFHRLIEQFVSSKEQRYAAHRVVYASWHQG 65
Query: 52 V---VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE 108
+ E+QF L + G + + G +DV LA+DA E
Sbjct: 66 LFHSAQTSEKQFQIERNRHIDLVHAGIEPKYVPMPPNGQEKG-------VDVSLAIDAME 118
Query: 109 QS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
++ ++ V+ +GDG T LV AL + +V ++ S RR D
Sbjct: 119 RAMEGKIDVAVLVTGDGDLTPLVRALMKHGVRVGLLYFEYESSQRTSHVNRRLLD 173
>gi|116626906|ref|YP_829062.1| hypothetical protein Acid_7883 [Candidatus Solibacter usitatus
Ellin6076]
gi|116230068|gb|ABJ88777.1| protein of unknown function DUF88 [Candidatus Solibacter usitatus
Ellin6076]
Length = 451
Score = 79.0 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/178 (21%), Positives = 72/178 (40%), Gaps = 23/178 (12%)
Query: 3 DPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
+ + KIA+FID N+ K+ L + D +L A + R ++ + Y +
Sbjct: 2 EQKLKIAVFIDFDNIEIGVKSTLHREFDVAAVLDALKERGEIVTKFAYA--------NWG 53
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHL---VI 118
L + Q+V + + G D+ LA+DA E + +H+ I
Sbjct: 54 RQESATRALSEHAVQMVQRDPSPRGDKNG-------ADINLALDALEMAFTHDHINAFAI 106
Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
SGD F LV L++ K++ +V + S L++ F+ + ++ R
Sbjct: 107 VSGDSDFIALVNKLKQYDKRIFVV----GGRAFTSTILQKNCHEFVAYESVMDDKPRS 160
>gi|294495770|ref|YP_003542263.1| hypothetical protein Mmah_1111 [Methanohalophilus mahii DSM 5219]
gi|292666769|gb|ADE36618.1| protein of unknown function DUF88 [Methanohalophilus mahii DSM
5219]
Length = 206
Score = 79.0 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 41/194 (21%), Positives = 75/194 (38%), Gaps = 51/194 (26%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFR-----------------------SRAIV 43
++ +FIDG NL +Y LLK + +
Sbjct: 23 RMMVFIDGENLV---------FNYLSLLKNGKVPNDPVQHEKDVFVWHINSVVNPQFHEI 73
Query: 44 IRAYYYTTVVGDPE------QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSS 97
IRA YYT + G E ++ + P L +N + VV K K+ ++ G
Sbjct: 74 IRANYYTYITGSDETIIDQIKKLAYARPPRSKLPHNLYPVVFKKPKKRAQSKG------- 126
Query: 98 MDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQ 155
+D+++ VD Q ++ + +F+GDG + ++ R K+V + + + +
Sbjct: 127 VDIQMTVDILSQVYNNNIDTVYLFAGDGDYLPVINEAIRMGKQVYLAAFSHGL----NKK 182
Query: 156 LRRQADYFMDLAYL 169
L + D F L +
Sbjct: 183 LVNKVDQFHLLDDI 196
>gi|293605834|ref|ZP_06688205.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
gi|292815747|gb|EFF74857.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
Length = 673
Score = 77.9 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 46/187 (24%), Positives = 70/187 (37%), Gaps = 25/187 (13%)
Query: 1 MFDPREKI--ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
M P E + ALF D N+ + + D R +L+ + ++ Y
Sbjct: 10 MTTPNENVSMALFCDFENVALGVRDTKYQKFDIRPVLERLLLKGSIVVKKAYC------- 62
Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE---QSEGLE 114
+ +H F+++ R+ K+S D+ L VDA + +
Sbjct: 63 -DWERYKEFKAPMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDFCYTKSHVN 114
Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
VI SGD F+ LV+ L+ KKV V S SD L D F+ L EI
Sbjct: 115 TFVIISGDSDFSPLVSKLRENNKKVIGVGVKQS----TSDLLIANCDEFIFYDDLAREIQ 170
Query: 175 RDPDEDK 181
R D +
Sbjct: 171 RTADARR 177
>gi|217970117|ref|YP_002355351.1| hypothetical protein Tmz1t_1700 [Thauera sp. MZ1T]
gi|217507444|gb|ACK54455.1| protein of unknown function DUF88 [Thauera sp. MZ1T]
Length = 564
Score = 77.9 bits (191), Expect = 5e-13, Method: Composition-based stats.
Identities = 38/182 (20%), Positives = 68/182 (37%), Gaps = 28/182 (15%)
Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
ALF D N+ + + D +++L+ + ++ Y +
Sbjct: 11 ALFCDFENVALGVRDAKYEKFDIKRVLERLLLKGSIVVKKAYC--------DWDRYKSFK 62
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124
+H F+++ R+ K+S D+ L VDA + ++ VI SGD
Sbjct: 63 AAMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGDSD 115
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL-----KNEIARDPDE 179
F+ LV+ L+ K+V V S SD L D F+ L + R+ +
Sbjct: 116 FSPLVSKLRENAKQVIGVGVKQS----TSDLLIANCDEFIFYDDLVRDSQRAAAKREARD 171
Query: 180 DK 181
+
Sbjct: 172 NP 173
>gi|229541784|ref|ZP_04430844.1| protein of unknown function DUF88 [Bacillus coagulans 36D1]
gi|229326204|gb|EEN91879.1| protein of unknown function DUF88 [Bacillus coagulans 36D1]
Length = 179
Score = 77.9 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 40/177 (22%), Positives = 71/177 (40%), Gaps = 23/177 (12%)
Query: 5 REKIALFIDGAN-------LYASSKALGFDIDYRKLLKAFRSRAI--VIRAYYYTTVVGD 55
+++ +FIDG N LY S + L DY KL + +R + R YYYT V
Sbjct: 1 MKRVMVFIDGNNFEAALTALYGSQQRL----DYLKLAEYVAARRDGILQRIYYYTAVGSL 56
Query: 56 PEQQFSPLHPLLDWLHYNGFQVVAKVA---KEFTENCGRK-RVKSSMDVELAVDAFEQS- 110
+++ + +D L+ + +AK+ G+ + DV +AVD +
Sbjct: 57 DKEKAAATKLFIDHLNKKVPKCIAKLGYLSVVGINALGKPIFTEKGTDVNIAVDLVSLAF 116
Query: 111 -EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
G + ++FS D + + + K V + V + L D ++ L
Sbjct: 117 NNGYDEAILFSADTDYEAAIKMARSLGKNV-VAGVVDQQKAGYMKDL---CDEYITL 169
>gi|82703323|ref|YP_412889.1| hypothetical protein Nmul_A2205 [Nitrosospira multiformis ATCC
25196]
gi|82411388|gb|ABB75497.1| Protein of unknown function DUF88 [Nitrosospira multiformis ATCC
25196]
Length = 381
Score = 77.9 bits (191), Expect = 6e-13, Method: Composition-based stats.
Identities = 40/172 (23%), Positives = 64/172 (37%), Gaps = 23/172 (13%)
Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
A+F D N+ + + D + +L+ + ++ Y +
Sbjct: 11 AVFCDFENVALGVRDAKYEKFDIKPVLERLLLKGSIVIKKAYC--------DWDRYKTFK 62
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124
LH F+++ R+ K+S D+ L VDA + + VI SGD
Sbjct: 63 TALHEANFELIEIPHI-------RQSGKNSADIRLVVDALDLCYTKSHVNTFVIISGDSD 115
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
F+ LV+ L+ K+V V S SD L D F+ L EI R
Sbjct: 116 FSPLVSKLRENAKQVIGVGVKKS----TSDLLIANCDEFIFYDDLVREIQRT 163
>gi|302867482|ref|YP_003836119.1| hypothetical protein Micau_3012 [Micromonospora aurantiaca ATCC
27029]
gi|315506110|ref|YP_004084997.1| hypothetical protein ML5_5375 [Micromonospora sp. L5]
gi|302570341|gb|ADL46543.1| protein of unknown function DUF88 [Micromonospora aurantiaca ATCC
27029]
gi|315412729|gb|ADU10846.1| protein of unknown function DUF88 [Micromonospora sp. L5]
Length = 356
Score = 77.5 bits (190), Expect = 7e-13, Method: Composition-based stats.
Identities = 43/175 (24%), Positives = 64/175 (36%), Gaps = 23/175 (13%)
Query: 3 DPREKIALFIDGANLYASSKAL--GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
D ++IALF+D NL + G D+R + A R V+ Y E +
Sbjct: 2 DHEDRIALFLDYENLALGVRDHHGGRPFDFRPIADALAERGRVVVRRAYADWSYFDEDRR 61
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLV 117
+ E + G R + D+++AVDA E + + V
Sbjct: 62 MLTRSHV-------------ELIEIPQRMGASRKNA-ADIKMAVDAVELAFERGYISTFV 107
Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
I +GD FT LV L+ K+V V S S L D F+ L+
Sbjct: 108 ICTGDSDFTPLVHKLRELNKRVIGVGVEKS----TSALLPPACDEFLYYDRLEGV 158
>gi|330820543|ref|YP_004349405.1| hypothetical protein bgla_2g14470 [Burkholderia gladioli BSR3]
gi|327372538|gb|AEA63893.1| hypothetical protein bgla_2g14470 [Burkholderia gladioli BSR3]
Length = 525
Score = 77.5 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 42/185 (22%), Positives = 72/185 (38%), Gaps = 25/185 (13%)
Query: 1 MFDPREKI--ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
M P++ + ALF D N+ + F+ D + +L+ + ++ Y
Sbjct: 1 MALPQDSVNMALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC------- 53
Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLE 114
+ +H F+++ R+ K+S D+ L VDA + ++
Sbjct: 54 -DWDRYKTFKGAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVD 105
Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
VI SGD F+ LV+ L+ K+V V S SD L D F+ L E+
Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLARELQ 161
Query: 175 RDPDE 179
R +
Sbjct: 162 RAQAK 166
>gi|238059538|ref|ZP_04604247.1| hypothetical protein MCAG_00504 [Micromonospora sp. ATCC 39149]
gi|237881349|gb|EEP70177.1| hypothetical protein MCAG_00504 [Micromonospora sp. ATCC 39149]
Length = 367
Score = 77.1 bits (189), Expect = 9e-13, Method: Composition-based stats.
Identities = 43/175 (24%), Positives = 64/175 (36%), Gaps = 23/175 (13%)
Query: 3 DPREKIALFIDGANLYASSKAL--GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
D ++IALF+D NL ++ G D R + A R V+ Y E +
Sbjct: 5 DHEDRIALFLDYENLALGAREHLGGMAFDLRPIADALAERGRVVVRRAYADWSFFDEDRR 64
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLV 117
+ E + G R + D+++AVDA E + + V
Sbjct: 65 MLTRSHV-------------ELIEMPQRMGASRKNA-ADIKMAVDAVELAFERAYVSTFV 110
Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
I +GD FT LV L+ K+V V S S L D F+ L+
Sbjct: 111 ICTGDSDFTPLVHKLRELNKRVIGVGVEKS----TSALLPPACDEFLYYDRLEGV 161
>gi|71908802|ref|YP_286389.1| hypothetical protein Daro_3189 [Dechloromonas aromatica RCB]
gi|71848423|gb|AAZ47919.1| Protein of unknown function DUF88 [Dechloromonas aromatica RCB]
Length = 421
Score = 76.7 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 40/180 (22%), Positives = 72/180 (40%), Gaps = 25/180 (13%)
Query: 9 ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
ALF D N+ + ++ D R +L+ ++ ++ Y +
Sbjct: 11 ALFCDFENIALGVRDAQYEKFDIRPVLERLLAKGSIVVKKAYC--------DWDRYKAFK 62
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124
+H F+++ R+ K+S D+ + VDA + ++ VI SGD
Sbjct: 63 AAMHEANFELIEIPHV-------RQSGKNSADIRMVVDALDLCYTKAHVDTFVIISGDSD 115
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL-KN-EIARDPDEDKK 182
F+ LV+ L+ K+V V S SD L D F+ L ++ E R P + ++
Sbjct: 116 FSPLVSKLRENAKRVIGVGVKQSC----SDLLVTNCDEFIYYDDLVRDREAGRGPQQRRE 171
>gi|303247327|ref|ZP_07333600.1| protein of unknown function DUF88 [Desulfovibrio fructosovorans JJ]
gi|302491241|gb|EFL51130.1| protein of unknown function DUF88 [Desulfovibrio fructosovorans JJ]
Length = 193
Score = 76.7 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/190 (17%), Positives = 62/190 (32%), Gaps = 29/190 (15%)
Query: 11 FIDGANLYASSKALGFD--IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68
ID +Y D IDY KL + RAYY +V + +
Sbjct: 8 LIDAGYMYRGQSIYNRDYSIDYVKLRNKLEIEEPLWRAYYLNSVPNPTPDAQVSFYNWMR 67
Query: 69 WLHYNGFQVVAKVAKEFTEN-----------------------CGRKRVKSSMDVELAVD 105
G +++ K+ + + + + +DV LA
Sbjct: 68 SAPPIGPKIITKLYELRSSEITDLYCEHCRRKVPVACPNDPKHRLSREQQKGVDVGLATL 127
Query: 106 AFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165
A + + L++ SGD + + K K+ ++ S L+ +AD
Sbjct: 128 ALTHVDNYDTLILSSGDSDLLDAIEYITEKNKRFELLVFKNG----VSTDLQCRADRIYW 183
Query: 166 LAYLKNEIAR 175
+ +E+AR
Sbjct: 184 IDDFASEVAR 193
>gi|56477068|ref|YP_158657.1| hypothetical protein ebA2897 [Aromatoleum aromaticum EbN1]
gi|56313111|emb|CAI07756.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
Length = 510
Score = 76.3 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 46/185 (24%), Positives = 67/185 (36%), Gaps = 33/185 (17%)
Query: 1 MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
M P E ALF D N+ + + D +++L+ + ++ Y
Sbjct: 1 MASPHETASMALFCDFENVALGVRDANYEKFDIKRVLERLLLKGSIVVKKAYC------- 53
Query: 58 QQFSPLHPLLDWLHYNGFQVVAKV----AKEFTENCGRKRVKSSMDVELAVDAFEQ---S 110
DW Y GF+ E R+ K+S D+ L VDA +
Sbjct: 54 ----------DWDRYKGFKATMHEANFELIEIPHV--RQSGKNSADIRLVVDALDLCYTK 101
Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
+ VI SGD F+ LV+ L+ K+V V S SD L D F+ L
Sbjct: 102 SHVNTFVIISGDSDFSPLVSKLRENAKQVIGVGVKQS----TSDLLIANCDEFIFYDDLV 157
Query: 171 NEIAR 175
E R
Sbjct: 158 RESQR 162
>gi|206896404|ref|YP_002247532.1| hypothetical protein COPRO5265_1226 [Coprothermobacter
proteolyticus DSM 5265]
gi|206739021|gb|ACI18099.1| protein of unknown function [Coprothermobacter proteolyticus DSM
5265]
Length = 321
Score = 76.3 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 43/174 (24%), Positives = 76/174 (43%), Gaps = 28/174 (16%)
Query: 9 ALFIDGANLYASSKAL-GFDIDYRKLLKA----FRSRAIVIRAYYYTTVVGDPEQQFSPL 63
A+F+D NL +K+L +D ++LL+ F S + A YT +
Sbjct: 8 AIFLDLENL---AKSLEKYDKTPQELLQKILDTFVSMGKIDVARVYTG--------WGVF 56
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFS 120
L+ + G++VV + G VK+ D+++ VDA + + ++ V S
Sbjct: 57 ASLIPFAVDMGYEVVF----VYAHRSGS-VVKNMADMQITVDALKLGYERDSIDAFVFVS 111
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
D F ++ ALQ K+V ++ D + S+ L+ AD F+ L L +
Sbjct: 112 ADRDFIPVIKALQGLGKEVVVI----GDEQITSEALKNTADAFVSLNELAGGLK 161
>gi|88810791|ref|ZP_01126048.1| hypothetical protein NB231_16963 [Nitrococcus mobilis Nb-231]
gi|88792421|gb|EAR23531.1| hypothetical protein NB231_16963 [Nitrococcus mobilis Nb-231]
Length = 196
Score = 75.9 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/192 (20%), Positives = 69/192 (35%), Gaps = 32/192 (16%)
Query: 11 FIDGANLYAS-SKALGFD--IDYRKLLKAFRSR-AIVIRAYYYTTVVGDPEQQFSPLHPL 66
IDG+ ++A+ + G +DY +L + ++ R YY +V D H
Sbjct: 6 LIDGSYIHANNIQRFGPHTRVDYLRLRRLIEEHLGVLWRGYYLNSVQSDAHSARERFHSW 65
Query: 67 LDWLHYNGFQVVAKVA------------------------KEFTENCGRKRVKSSMDVEL 102
L NG ++ K+ ++ + + +DV L
Sbjct: 66 LQSAAPNGPHLIVKLYGLKNERVENAFCVDCGTKIEVCCPHGGPDHHLVNQRQMGVDVGL 125
Query: 103 AVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162
A A E + LV+ SGDG V L K++ + S L+ +AD
Sbjct: 126 ATLALAHKERYDCLVLSSGDGDLLDAVEHLCENGKRIELAVFSTG----VSTDLQARADR 181
Query: 163 FMDLAYLKNEIA 174
+ + +E+A
Sbjct: 182 VLWIDDHMDELA 193
>gi|239905768|ref|YP_002952507.1| hypothetical protein DMR_11300 [Desulfovibrio magneticus RS-1]
gi|239795632|dbj|BAH74621.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 199
Score = 75.9 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/193 (18%), Positives = 66/193 (34%), Gaps = 29/193 (15%)
Query: 11 FIDGANLYASSKALGFD--IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68
ID +Y + IDY KL + + RAYY ++ + + +
Sbjct: 8 LIDAGYMYRGQSYFSREYSIDYVKLRNKLEAETPIWRAYYLNSIPHPTPESQIAFYNWMR 67
Query: 69 WLHYNGFQVVAKVAKEFT---------------------ENCGRKRVK--SSMDVELAVD 105
G +++ K+ + T + R + +DV LA
Sbjct: 68 SAPPQGPKIITKLYELRTSEINELYCEQCRRKVPVTCPNDRAHRLSREQQKGVDVGLATL 127
Query: 106 AFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165
A E + L++ SGD V + K K+ ++ S L+ +AD
Sbjct: 128 ALTHIENYDTLILSSGDSDLLDAVEYITEKNKRFELLVFKNG----VSTDLQCRADRIWW 183
Query: 166 LAYLKNEIARDPD 178
+ +E+AR+
Sbjct: 184 IDEFAHEVAREAR 196
>gi|269954862|ref|YP_003324651.1| hypothetical protein Xcel_0052 [Xylanimonas cellulosilytica DSM
15894]
gi|269303543|gb|ACZ29093.1| protein of unknown function DUF88 [Xylanimonas cellulosilytica DSM
15894]
Length = 470
Score = 75.9 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 63/167 (37%), Gaps = 23/167 (13%)
Query: 3 DPREKIALFIDGANLYASSKAL--GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
D E++A+F+D NL ++ G D+ + A R V+ Y E +
Sbjct: 2 DNEERLAVFLDYENLALGAREHLGGMQFDFGPIADALAVRGRVVVRRAYADWSYFDEDRR 61
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLV 117
+ + E + G R + D+++ VDA E + E + V
Sbjct: 62 ALTRHQV-------------ELIEMPQRMGASRKNA-ADIKMVVDAIEMAFEREYISTFV 107
Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
+ +GD F+ LV L+ K+V V S S L D F+
Sbjct: 108 MCTGDSDFSPLVHKLRELNKRVIGVGVEKS----TSRLLPASCDEFL 150
>gi|116671994|ref|YP_832927.1| hypothetical protein Arth_3452 [Arthrobacter sp. FB24]
gi|116612103|gb|ABK04827.1| protein of unknown function DUF88 [Arthrobacter sp. FB24]
Length = 282
Score = 75.2 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/178 (21%), Positives = 67/178 (37%), Gaps = 30/178 (16%)
Query: 1 MFDPREK-IALFIDGANLYASSKALGFDI----------DYRKLLKAFRSRAIVIRAYYY 49
M +++ +A+F+D NL+ K D+ D K+++ Y
Sbjct: 1 MAGSQQRNVAIFLDMENLFGGYKN---DVTSVPLATVVRDIEKVVEDTGLGGQTALTRAY 57
Query: 50 TTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ 109
+ L +N K + F + K++ D+EL VDA E
Sbjct: 58 ANWGRADMGGYRSQL-----LAHN-----IKPVQVF---SFDQSSKNAADIELVVDALEV 104
Query: 110 S---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
+ +E V+ SGDG F L+ L K+ + +T + + L+ AD+F
Sbjct: 105 AADMPWIELFVVVSGDGDFVPLLRRLHALGKRSLVATTSQPKAGVVNKVLQSVADHFH 162
>gi|325107780|ref|YP_004268848.1| hypothetical protein Plabr_1213 [Planctomyces brasiliensis DSM
5305]
gi|324968048|gb|ADY58826.1| protein of unknown function DUF88 [Planctomyces brasiliensis DSM
5305]
Length = 245
Score = 75.2 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 36/160 (22%), Positives = 59/160 (36%), Gaps = 24/160 (15%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
K A+ +D NL K G + LL + I Y D L
Sbjct: 6 KAAILLDAENLTHWIKYDG----PKTLLNELNADGSFIIRKAYARWTND------SLADF 55
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124
+ L GF +V K+S D++L VDA + + + ++ V+ +GD
Sbjct: 56 QESLTLLGFDLV--------HTFHPVSKKNSADIQLTVDAMQFAADKTVQTFVLATGDSD 107
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F+ L L+ K T++ P S+ +R F+
Sbjct: 108 FSPLFRRLREMGK--TVIGVGKRSP--LSESVRNSCSRFI 143
>gi|167629267|ref|YP_001679766.1| hypothetical protein HM1_0800 [Heliobacterium modesticaldum Ice1]
gi|167592007|gb|ABZ83755.1| hypothetical protein HM1_0800 [Heliobacterium modesticaldum Ice1]
Length = 214
Score = 75.2 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 42/177 (23%), Positives = 68/177 (38%), Gaps = 16/177 (9%)
Query: 6 EKIALFIDGANLYAS-SKALGF-DIDYRKLLKAFRSRAIVIRAYYYT-------TVVGDP 56
+K A+FIDG L G +DY KL K + R YYY +
Sbjct: 21 DKCAIFIDGGYLDKVFQDEFGSPRVDYLKLSKWLSRGTSIFRTYYYNCLPYQSNPPTTEE 80
Query: 57 EQQFSPLHPLLDWLHYNG-FQVVA--KVAKEFTENCGRKRVKSSMDVELAVDAFEQS--E 111
Q+FS L ++V + ++ V+ +D+ L VD +
Sbjct: 81 SQRFSKKQAFYGRLKQLERYEVRLGKLEFRGNRQDGTPIFVQKRVDILLGVDLALLAAKN 140
Query: 112 GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
+ H IF+GD F ++ + + +T+ S+P D L R+AD + L
Sbjct: 141 RITHATIFAGDSDFLPAISVAKNEGVLITLAHGGASNPPH--DDLWREADERIQLDT 195
>gi|119898953|ref|YP_934166.1| hypothetical protein azo2662 [Azoarcus sp. BH72]
gi|119671366|emb|CAL95279.1| conserved hypothetical protein [Azoarcus sp. BH72]
Length = 481
Score = 75.2 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 38/165 (23%), Positives = 63/165 (38%), Gaps = 23/165 (13%)
Query: 9 ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
ALF D N+ + +D D +++L+ + ++ Y +
Sbjct: 11 ALFCDFENVALGVRDAKYDKFDIKRVLERLLLKGSIVVKKAYC--------DWERYKGFK 62
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124
+H F+++ R+ K+S D+ L VDA + + VI SGD
Sbjct: 63 AAMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVNTFVIISGDSD 115
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
F+ LV+ L+ K+V V S SD L D F+ L
Sbjct: 116 FSPLVSKLRENAKQVIGVGVKQS----TSDLLIANCDEFIFYDDL 156
>gi|134282577|ref|ZP_01769281.1| conserved hypothetical protein [Burkholderia pseudomallei 305]
gi|134246134|gb|EBA46224.1| conserved hypothetical protein [Burkholderia pseudomallei 305]
Length = 622
Score = 74.8 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 42/181 (23%), Positives = 70/181 (38%), Gaps = 25/181 (13%)
Query: 1 MFDPREKI--ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
M P++ + ALF D N+ + F+ D + +L+ + ++ Y
Sbjct: 144 MALPQDSVNMALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC------- 196
Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLE 114
+ +H F+++ R+ K+S D+ L VDA + ++
Sbjct: 197 -DWDRYKTFKAAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVD 248
Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
VI SGD F+ LV+ L+ K+V V S SD L D F+ L E
Sbjct: 249 TFVIISGDSDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLAREQQ 304
Query: 175 R 175
R
Sbjct: 305 R 305
>gi|167839964|ref|ZP_02466648.1| hypothetical protein Bpse38_25044 [Burkholderia thailandensis
MSMB43]
Length = 445
Score = 74.8 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 41/171 (23%), Positives = 65/171 (38%), Gaps = 23/171 (13%)
Query: 9 ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
ALF D N+ + F+ D R +L+ + ++ Y +
Sbjct: 2 ALFCDFENIALGVRDTKFEKFDIRPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124
+H F+++ R+ K+S D+ L VDA + ++ VI SGD
Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
F+ LV+ L+ K+V V S SD L D F+ L E R
Sbjct: 107 FSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLAREQQR 153
>gi|219848211|ref|YP_002462644.1| hypothetical protein Cagg_1300 [Chloroflexus aggregans DSM 9485]
gi|219542470|gb|ACL24208.1| protein of unknown function DUF88 [Chloroflexus aggregans DSM 9485]
Length = 208
Score = 74.8 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 39/195 (20%), Positives = 67/195 (34%), Gaps = 34/195 (17%)
Query: 7 KIALFIDGANL------YASSKALGF--DIDYRKLLKAFRSRAIVIRA---YYYT----- 50
+I +F DG+ + + K +G+ + +L++ F S A Y
Sbjct: 6 RIGVFYDGSYFSYAQTYFYAEKKVGWLSFTPFHRLIEQFISSKEQRYAMHRIVYASWHQG 65
Query: 51 --TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE 108
E+QF L + G + + K +DV LAVD E
Sbjct: 66 LFPASQTNEKQFFIERNRHLDLMHAGIEPK------YVPMAPSGHEKG-VDVSLAVDVME 118
Query: 109 --QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASD---QLRRQADYF 163
++ V+ +GDG T L + + +V + P S +L +Y
Sbjct: 119 RVMEGKIDVAVLVTGDGDLTPLARTVMKHGVRVGVFYFEYDSPQRNSRVNGRLITACNYA 178
Query: 164 MDLAYLKNEIARDPD 178
++ L RDP
Sbjct: 179 FNVNDL----ERDPR 189
>gi|311106775|ref|YP_003979628.1| hypothetical protein AXYL_03593 [Achromobacter xylosoxidans A8]
gi|310761464|gb|ADP16913.1| hypothetical protein AXYL_03593 [Achromobacter xylosoxidans A8]
Length = 576
Score = 74.4 bits (182), Expect = 6e-12, Method: Composition-based stats.
Identities = 45/187 (24%), Positives = 69/187 (36%), Gaps = 25/187 (13%)
Query: 1 MFDPREKI--ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
M P E + ALF D N+ + + D R +L+ + ++ Y
Sbjct: 1 MNTPNENVSMALFCDFENVALGVRDTKYQKFDIRPVLERLLLKGSIVVKKAYC------- 53
Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE---QSEGLE 114
+ +H F+++ R+ K+S D+ L VDA + +
Sbjct: 54 -DWERYKEFKAPMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDFCYTKSHVN 105
Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
VI SGD F+ LV+ L+ KKV V S SD L D F+ L E
Sbjct: 106 TFVIISGDSDFSPLVSKLRENNKKVIGVGVKQS----TSDLLIANCDEFIFYDDLAREGQ 161
Query: 175 RDPDEDK 181
R D +
Sbjct: 162 RAADARR 168
>gi|257094026|ref|YP_003167667.1| hypothetical protein CAP2UW1_2449 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257046550|gb|ACV35738.1| protein of unknown function DUF88 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 460
Score = 74.0 bits (181), Expect = 8e-12, Method: Composition-based stats.
Identities = 40/178 (22%), Positives = 66/178 (37%), Gaps = 23/178 (12%)
Query: 9 ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
AL+ D N+ + +D D + +L+ + ++ Y +
Sbjct: 11 ALYCDFENVALGVRDAKYDKFDIKPVLERLLLKGSIVVKKAYC--------DWERYKGFK 62
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124
+H F+++ R+ K+S D+ L VDA + ++ VI SGD
Sbjct: 63 STMHEASFELIEIPHL-------RQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGDSD 115
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182
F+ LV+ L+ K V V S SD L D F+ L E R D +
Sbjct: 116 FSPLVSKLRENAKYVIGVGVKQS----TSDLLIGNCDEFIFYDDLVRESQRAARRDSR 169
>gi|226198540|ref|ZP_03794107.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan
9]
gi|225929463|gb|EEH25483.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan
9]
Length = 486
Score = 74.0 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 42/181 (23%), Positives = 69/181 (38%), Gaps = 25/181 (13%)
Query: 1 MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
M P++ + ALF D N+ + F D + +L+ + ++ Y
Sbjct: 1 MALPQDSVNMALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC------- 53
Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLE 114
+ +H F+++ R+ K+S D+ L VDA + ++
Sbjct: 54 -DWDRYKTFKAAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVD 105
Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
VI SGD F+ LV+ L+ K+V V S SD L D F+ L E
Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLAREQQ 161
Query: 175 R 175
R
Sbjct: 162 R 162
>gi|283851692|ref|ZP_06368970.1| protein of unknown function DUF88 [Desulfovibrio sp. FW1012B]
gi|283572812|gb|EFC20794.1| protein of unknown function DUF88 [Desulfovibrio sp. FW1012B]
Length = 193
Score = 73.6 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/190 (18%), Positives = 60/190 (31%), Gaps = 29/190 (15%)
Query: 11 FIDGANLYASSKALGFD--IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68
ID +Y + IDY KL S + RAYY +V + +
Sbjct: 8 LIDAGYMYRGQSIYSREYSIDYVKLRNRLESEEPLWRAYYLNSVPHPTPDSQVAFYNWMR 67
Query: 69 WLHYNGFQVVAK---------------------VAKEFTENCGRKRVK--SSMDVELAVD 105
G +++ K + R + +DV LA
Sbjct: 68 SAPPLGPKIITKLYELRSSEITDLYCEQDRRKVPVSCPNDRAHRLSREQQKGVDVGLATL 127
Query: 106 AFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165
A E + L++ SGD + + K K+ ++ S L+ +AD
Sbjct: 128 ALTHIENYDTLILSSGDSDLLDAIEYITEKNKRFELLVFKNG----VSTDLQCRADRIYW 183
Query: 166 LAYLKNEIAR 175
+ ++AR
Sbjct: 184 IDEFAQDVAR 193
>gi|76819463|ref|YP_335506.1| hypothetical protein BURPS1710b_A0347 [Burkholderia pseudomallei
1710b]
gi|254262408|ref|ZP_04953273.1| conserved hypothetical protein [Burkholderia pseudomallei 1710a]
gi|76583936|gb|ABA53410.1| Protein of unknown function family [Burkholderia pseudomallei
1710b]
gi|254213410|gb|EET02795.1| conserved hypothetical protein [Burkholderia pseudomallei 1710a]
Length = 483
Score = 73.6 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/181 (23%), Positives = 69/181 (38%), Gaps = 25/181 (13%)
Query: 1 MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
M P++ + ALF D N+ + F D + +L+ + ++ Y
Sbjct: 1 MALPQDSVNMALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC------- 53
Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLE 114
+ +H F+++ R+ K+S D+ L VDA + ++
Sbjct: 54 -DWDRYKTFKAAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVD 105
Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
VI SGD F+ LV+ L+ K+V V S SD L D F+ L E
Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLAREQQ 161
Query: 175 R 175
R
Sbjct: 162 R 162
>gi|237509073|ref|ZP_04521788.1| conserved hypothetical protein [Burkholderia pseudomallei MSHR346]
gi|235001278|gb|EEP50702.1| conserved hypothetical protein [Burkholderia pseudomallei MSHR346]
Length = 480
Score = 73.6 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/181 (23%), Positives = 69/181 (38%), Gaps = 25/181 (13%)
Query: 1 MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
M P++ + ALF D N+ + F D + +L+ + ++ Y
Sbjct: 1 MALPQDSVNMALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC------- 53
Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLE 114
+ +H F+++ R+ K+S D+ L VDA + ++
Sbjct: 54 -DWDRYKTFKAAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVD 105
Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
VI SGD F+ LV+ L+ K+V V S SD L D F+ L E
Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLAREQQ 161
Query: 175 R 175
R
Sbjct: 162 R 162
>gi|126456340|ref|YP_001075832.1| hypothetical protein BURPS1106A_A1798 [Burkholderia pseudomallei
1106a]
gi|242312308|ref|ZP_04811325.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b]
gi|126230108|gb|ABN93521.1| conserved hypothetical protein [Burkholderia pseudomallei 1106a]
gi|242135547|gb|EES21950.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b]
Length = 483
Score = 73.6 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/181 (23%), Positives = 69/181 (38%), Gaps = 25/181 (13%)
Query: 1 MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
M P++ + ALF D N+ + F D + +L+ + ++ Y
Sbjct: 1 MALPQDSVNMALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC------- 53
Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLE 114
+ +H F+++ R+ K+S D+ L VDA + ++
Sbjct: 54 -DWDRYKTFKAAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVD 105
Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
VI SGD F+ LV+ L+ K+V V S SD L D F+ L E
Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLAREQQ 161
Query: 175 R 175
R
Sbjct: 162 R 162
>gi|163857253|ref|YP_001631550.1| hypothetical protein Bpet2940 [Bordetella petrii DSM 12804]
gi|163260981|emb|CAP43283.1| conserved hypothetical protein [Bordetella petrii]
Length = 385
Score = 73.2 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/177 (22%), Positives = 65/177 (36%), Gaps = 25/177 (14%)
Query: 9 ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
ALF D N+ + + D + +L+ + ++ Y +
Sbjct: 54 ALFCDFENVALGVRDANYQKFDIKPVLERLLLKGSIVVKKAYC--------DWERYREFK 105
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124
+H F+++ R+ K+S D+ L VDA + ++ VI SGD
Sbjct: 106 ATMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKLHVDTFVIISGDSD 158
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
F+ LV+ L+ K+V V S SD L D F+ L R E K
Sbjct: 159 FSPLVSKLRENAKQVIGVGVKRS----TSDLLIANCDEFIFYDDL--VRERPRAEPK 209
>gi|53722351|ref|YP_111336.1| hypothetical protein BPSS1326 [Burkholderia pseudomallei K96243]
gi|52212765|emb|CAH38797.1| conserved hypothetical protein [Burkholderia pseudomallei K96243]
Length = 483
Score = 73.2 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/181 (23%), Positives = 69/181 (38%), Gaps = 25/181 (13%)
Query: 1 MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
M P++ + ALF D N+ + F D + +L+ + ++ Y
Sbjct: 1 MALPQDSVNMALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC------- 53
Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLE 114
+ +H F+++ R+ K+S D+ L VDA + ++
Sbjct: 54 -DWDRYKTFKAAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVD 105
Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
VI SGD F+ LV+ L+ K+V V S SD L D F+ L E
Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLAREQQ 161
Query: 175 R 175
R
Sbjct: 162 R 162
>gi|254183703|ref|ZP_04890295.1| conserved hypothetical protein [Burkholderia pseudomallei 1655]
gi|184214236|gb|EDU11279.1| conserved hypothetical protein [Burkholderia pseudomallei 1655]
Length = 474
Score = 73.2 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/171 (23%), Positives = 64/171 (37%), Gaps = 23/171 (13%)
Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
ALF D N+ + F D + +L+ + ++ Y +
Sbjct: 2 ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124
+H F+++ R+ K+S D+ L VDA + ++ VI SGD
Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
F+ LV+ L+ K+V V S SD L D F+ L E R
Sbjct: 107 FSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLAREQQR 153
>gi|167723901|ref|ZP_02407137.1| hypothetical protein BpseD_33095 [Burkholderia pseudomallei DM98]
Length = 474
Score = 73.2 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/171 (23%), Positives = 64/171 (37%), Gaps = 23/171 (13%)
Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
ALF D N+ + F D + +L+ + ++ Y +
Sbjct: 2 ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124
+H F+++ R+ K+S D+ L VDA + ++ VI SGD
Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
F+ LV+ L+ K+V V S SD L D F+ L E R
Sbjct: 107 FSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLAREQQR 153
>gi|126442572|ref|YP_001062878.1| hypothetical protein BURPS668_A1883 [Burkholderia pseudomallei 668]
gi|126222063|gb|ABN85568.1| conserved hypothetical protein [Burkholderia pseudomallei 668]
Length = 477
Score = 73.2 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/171 (23%), Positives = 64/171 (37%), Gaps = 23/171 (13%)
Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
ALF D N+ + F D + +L+ + ++ Y +
Sbjct: 2 ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124
+H F+++ R+ K+S D+ L VDA + ++ VI SGD
Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
F+ LV+ L+ K+V V S SD L D F+ L E R
Sbjct: 107 FSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLAREQQR 153
>gi|167742874|ref|ZP_02415648.1| hypothetical protein Bpse14_32667 [Burkholderia pseudomallei 14]
gi|254191183|ref|ZP_04897688.1| conserved hypothetical protein [Burkholderia pseudomallei Pasteur
52237]
gi|157938856|gb|EDO94526.1| conserved hypothetical protein [Burkholderia pseudomallei Pasteur
52237]
Length = 474
Score = 73.2 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/171 (23%), Positives = 64/171 (37%), Gaps = 23/171 (13%)
Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
ALF D N+ + F D + +L+ + ++ Y +
Sbjct: 2 ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124
+H F+++ R+ K+S D+ L VDA + ++ VI SGD
Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
F+ LV+ L+ K+V V S SD L D F+ L E R
Sbjct: 107 FSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLAREQQR 153
>gi|302325583|gb|ADL24784.1| conserved domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 253
Score = 72.9 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 69/159 (43%), Gaps = 24/159 (15%)
Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
A+F+D NL + G D L+K+ +S+ V+ Y + L PL
Sbjct: 23 TAVFVDAENLTFWAYNNGVH-D---LMKSLQSQGPVVIRKAY------GKWTSPQLSPLQ 72
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCF 125
+ NGF+++ + K+S D+++ VDA E + L+ +V+ +GD F
Sbjct: 73 QEFNINGFELI--------QTYHPITGKNSADIKMVVDAMEAATNPCLQTIVLATGDSDF 124
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
+ L L+ KKV V + S+ ++ +++
Sbjct: 125 SPLFRKLREMGKKVIGVGPLSKL----SECVQSSCTHYI 159
>gi|261414502|ref|YP_003248185.1| protein of unknown function DUF88 [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261370958|gb|ACX73703.1| protein of unknown function DUF88 [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 235
Score = 72.9 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 69/159 (43%), Gaps = 24/159 (15%)
Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
A+F+D NL + G D L+K+ +S+ V+ Y + L PL
Sbjct: 5 TAVFVDAENLTFWAYNNGVH-D---LMKSLQSQGPVVIRKAY------GKWTSPQLSPLQ 54
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCF 125
+ NGF+++ + K+S D+++ VDA E + L+ +V+ +GD F
Sbjct: 55 QEFNINGFELI--------QTYHPITGKNSADIKMVVDAMEAATNPCLQTIVLATGDSDF 106
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
+ L L+ KKV V + S+ ++ +++
Sbjct: 107 SPLFRKLREMGKKVIGVGPLSKL----SECVQSSCTHYI 141
>gi|167915186|ref|ZP_02502277.1| hypothetical protein Bpse112_32216 [Burkholderia pseudomallei 112]
Length = 474
Score = 72.9 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/171 (23%), Positives = 64/171 (37%), Gaps = 23/171 (13%)
Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
ALF D N+ + F D + +L+ + ++ Y +
Sbjct: 2 ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124
+H F+++ R+ K+S D+ L VDA + ++ VI SGD
Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
F+ LV+ L+ K+V V S SD L D F+ L E R
Sbjct: 107 FSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLAREQQR 153
>gi|167849880|ref|ZP_02475388.1| hypothetical protein BpseB_31835 [Burkholderia pseudomallei B7210]
Length = 474
Score = 72.9 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/171 (23%), Positives = 64/171 (37%), Gaps = 23/171 (13%)
Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
ALF D N+ + F D + +L+ + ++ Y +
Sbjct: 2 ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124
+H F+++ R+ K+S D+ L VDA + ++ VI SGD
Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
F+ LV+ L+ K+V V S SD L D F+ L E R
Sbjct: 107 FSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLAREQQR 153
>gi|217418449|ref|ZP_03449956.1| conserved hypothetical protein [Burkholderia pseudomallei 576]
gi|217397753|gb|EEC37768.1| conserved hypothetical protein [Burkholderia pseudomallei 576]
Length = 500
Score = 72.9 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/181 (23%), Positives = 69/181 (38%), Gaps = 25/181 (13%)
Query: 1 MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
M P++ + ALF D N+ + F D + +L+ + ++ Y
Sbjct: 18 MALPQDSVNMALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC------- 70
Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLE 114
+ +H F+++ R+ K+S D+ L VDA + ++
Sbjct: 71 -DWDRYKTFKAAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVD 122
Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
VI SGD F+ LV+ L+ K+V V S SD L D F+ L E
Sbjct: 123 TFVIISGDSDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLAREQQ 178
Query: 175 R 175
R
Sbjct: 179 R 179
>gi|167923021|ref|ZP_02510112.1| hypothetical protein BpseBC_30982 [Burkholderia pseudomallei
BCC215]
Length = 477
Score = 72.9 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/171 (23%), Positives = 64/171 (37%), Gaps = 23/171 (13%)
Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
ALF D N+ + F D + +L+ + ++ Y +
Sbjct: 2 ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124
+H F+++ R+ K+S D+ L VDA + ++ VI SGD
Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
F+ LV+ L+ K+V V S SD L D F+ L E R
Sbjct: 107 FSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLAREQQR 153
>gi|238024602|ref|YP_002908834.1| hypothetical protein bglu_2g12170 [Burkholderia glumae BGR1]
gi|237879267|gb|ACR31599.1| Hypothetical protein bglu_2g12170 [Burkholderia glumae BGR1]
Length = 538
Score = 72.9 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/181 (23%), Positives = 69/181 (38%), Gaps = 25/181 (13%)
Query: 1 MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
M P++ + ALF D N+ + F D + +L+ + ++ Y
Sbjct: 1 MALPQDSVNMALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC------- 53
Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLE 114
+ +H F+++ R+ K+S D+ L VDA + ++
Sbjct: 54 -DWDRYKTFKGAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVD 105
Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
VI SGD F+ LV+ L+ K+V V S SD L D F+ L E
Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLAREQQ 161
Query: 175 R 175
R
Sbjct: 162 R 162
>gi|167898481|ref|ZP_02485882.1| hypothetical protein Bpse7_32411 [Burkholderia pseudomallei 7894]
Length = 456
Score = 72.9 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/171 (23%), Positives = 64/171 (37%), Gaps = 23/171 (13%)
Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
ALF D N+ + F D + +L+ + ++ Y +
Sbjct: 2 ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124
+H F+++ R+ K+S D+ L VDA + ++ VI SGD
Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
F+ LV+ L+ K+V V S SD L D F+ L E R
Sbjct: 107 FSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLAREQQR 153
>gi|167820046|ref|ZP_02451726.1| hypothetical protein Bpse9_33267 [Burkholderia pseudomallei 91]
Length = 460
Score = 72.9 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/171 (23%), Positives = 64/171 (37%), Gaps = 23/171 (13%)
Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
ALF D N+ + F D + +L+ + ++ Y +
Sbjct: 2 ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124
+H F+++ R+ K+S D+ L VDA + ++ VI SGD
Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
F+ LV+ L+ K+V V S SD L D F+ L E R
Sbjct: 107 FSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLAREQQR 153
>gi|167906832|ref|ZP_02494037.1| hypothetical protein BpseN_31680 [Burkholderia pseudomallei NCTC
13177]
Length = 470
Score = 72.9 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/171 (23%), Positives = 64/171 (37%), Gaps = 23/171 (13%)
Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
ALF D N+ + F D + +L+ + ++ Y +
Sbjct: 2 ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124
+H F+++ R+ K+S D+ L VDA + ++ VI SGD
Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
F+ LV+ L+ K+V V S SD L D F+ L E R
Sbjct: 107 FSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLAREQQR 153
>gi|167828427|ref|ZP_02459898.1| hypothetical protein Bpseu9_32389 [Burkholderia pseudomallei 9]
Length = 469
Score = 72.9 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/171 (23%), Positives = 64/171 (37%), Gaps = 23/171 (13%)
Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
ALF D N+ + F D + +L+ + ++ Y +
Sbjct: 2 ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124
+H F+++ R+ K+S D+ L VDA + ++ VI SGD
Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
F+ LV+ L+ K+V V S SD L D F+ L E R
Sbjct: 107 FSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLAREQQR 153
>gi|167566002|ref|ZP_02358918.1| hypothetical protein BoklE_25814 [Burkholderia oklahomensis EO147]
Length = 524
Score = 72.9 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/171 (23%), Positives = 64/171 (37%), Gaps = 23/171 (13%)
Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
ALF D N+ + F D + +L+ + ++ Y +
Sbjct: 2 ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124
+H F+++ R+ K+S D+ L VDA + ++ VI SGD
Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
F+ LV+ L+ K+V V S SD L D F+ L E R
Sbjct: 107 FSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLAREQQR 153
>gi|254174034|ref|ZP_04880697.1| protein of unknown function [Burkholderia mallei ATCC 10399]
gi|254356680|ref|ZP_04972955.1| protein of unknown function [Burkholderia mallei 2002721280]
gi|148025707|gb|EDK83830.1| protein of unknown function [Burkholderia mallei 2002721280]
gi|160695081|gb|EDP85051.1| protein of unknown function [Burkholderia mallei ATCC 10399]
Length = 477
Score = 72.9 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/171 (23%), Positives = 64/171 (37%), Gaps = 23/171 (13%)
Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
ALF D N+ + F D + +L+ + ++ Y +
Sbjct: 2 ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124
+H F+++ R+ K+S D+ L VDA + ++ VI SGD
Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
F+ LV+ L+ K+V V S SD L D F+ L E R
Sbjct: 107 FSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLAREQQR 153
>gi|220934364|ref|YP_002513263.1| protein of unknown function DUF88 [Thioalkalivibrio sp. HL-EbGR7]
gi|219995674|gb|ACL72276.1| protein of unknown function DUF88 [Thioalkalivibrio sp. HL-EbGR7]
Length = 275
Score = 72.9 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/178 (22%), Positives = 66/178 (37%), Gaps = 23/178 (12%)
Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
ALF D N+ + + D K+L+ + ++ Y +
Sbjct: 11 ALFCDFENIALGVREAKYPKFDIGKVLERLLLKGNIVVRKAYC--------DWDRYKEFK 62
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124
+H F+++ R+ K+S D+ + VDA + ++ V+ SGD
Sbjct: 63 APMHEAAFELIEIPHV-------RQSGKNSADIRMVVDALDLCYTKGHVDAFVVISGDSD 115
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182
F+ LVA L+ K V V S SD L D F+ L E A + +K
Sbjct: 116 FSPLVAKLRENNKLVIGVGVKKS----TSDLLTAACDEFIYYDDLVREAAHKKRKPRK 169
>gi|256824346|ref|YP_003148306.1| hypothetical protein Ksed_04690 [Kytococcus sedentarius DSM 20547]
gi|256687739|gb|ACV05541.1| uncharacterized conserved protein [Kytococcus sedentarius DSM
20547]
Length = 412
Score = 72.9 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/182 (22%), Positives = 64/182 (35%), Gaps = 23/182 (12%)
Query: 6 EKIALFIDGANLYASSKAL--GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
++IALF+D NL ++ G D + + A R V+ Y E +
Sbjct: 4 DRIALFVDYENLALGARDHLGGMTFDLKPIADALAERGRVVVRRAYADWSYFDEDRRMLT 63
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFS 120
+ E + G R + D+++ VDA E + + I +
Sbjct: 64 RSHV-------------ELIEMPQRMGASRKNA-ADIKMVVDAIEMAFERGYITTFAICT 109
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GD FT LV L+ K V V S +M L D F+ L P ++
Sbjct: 110 GDSDFTPLVHKLRELNKNVIGVGVRNSTSAM----LPPSCDEFLFYDTLDGVDPHTPAKE 165
Query: 181 KK 182
K
Sbjct: 166 TK 167
>gi|323527162|ref|YP_004229315.1| hypothetical protein BC1001_2841 [Burkholderia sp. CCGE1001]
gi|323384164|gb|ADX56255.1| hypothetical protein BC1001_2841 [Burkholderia sp. CCGE1001]
Length = 534
Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/181 (23%), Positives = 66/181 (36%), Gaps = 25/181 (13%)
Query: 1 MFDPREKI--ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
M E + ALF D N+ + +D D + +L+ + ++ Y
Sbjct: 1 MASSNETVSMALFCDFENVALGVRDAKYDKFDIKLVLERLLLKGSIVVKKAYC------- 53
Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLE 114
+ +H F+++ R+ K+S D+ L VDA + +
Sbjct: 54 -DWDRYKSFKGAMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVN 105
Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
VI SGD F+ LV+ L+ K+V V S SD L D F L E
Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKQVIGVGVQQS----TSDLLIANCDEFFFYDDLVRESQ 161
Query: 175 R 175
R
Sbjct: 162 R 162
>gi|15668658|ref|NP_247457.1| hypothetical protein MJ_0482 [Methanocaldococcus jannaschii DSM
2661]
gi|2496000|sp|Q57905|Y482_METJA RecName: Full=Uncharacterized protein MJ0482
gi|1591185|gb|AAB98473.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
2661]
Length = 240
Score = 72.5 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 58/164 (35%), Gaps = 32/164 (19%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
+IAL IDG N+ F+ID K+ + ++ Y L
Sbjct: 71 RIALLIDGPNM----LRKEFNIDLDKIREVLSEFGDIVIGRVYLNQYASD--------KL 118
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124
++ + GF+ +DVE+AVDA E ++ + + D
Sbjct: 119 IEAVINQGFEPKI--------------SAGDVDVEMAVDATELVFNPNIDTIAYVTRDAD 164
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
F + + + KKV ++ S L+ ADY + +
Sbjct: 165 FLPAIRKAKERGKKVIVIGAEPGF----STALQNIADYVIKIGE 204
>gi|170693531|ref|ZP_02884690.1| protein of unknown function DUF88 [Burkholderia graminis C4D1M]
gi|170141686|gb|EDT09855.1| protein of unknown function DUF88 [Burkholderia graminis C4D1M]
Length = 534
Score = 72.5 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 42/182 (23%), Positives = 66/182 (36%), Gaps = 25/182 (13%)
Query: 1 MFDPREKI--ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
M E + ALF D N+ + +D D + +L+ + ++ Y
Sbjct: 1 MASSNETVSMALFCDFENVALGVRDAKYDKFDIKLVLERLLLKGSIVVKKAYC------- 53
Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLE 114
+ +H F+++ R+ K+S D+ L VDA + +
Sbjct: 54 -DWDRYKSFKGAMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVN 105
Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
VI SGD F+ LV+ L+ K+V V S SD L D F L E
Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKQVIGVGVQQS----TSDLLIANCDEFFFYDDLVRESQ 161
Query: 175 RD 176
R
Sbjct: 162 RT 163
>gi|307730797|ref|YP_003908021.1| hypothetical protein BC1003_2777 [Burkholderia sp. CCGE1003]
gi|307585332|gb|ADN58730.1| protein of unknown function DUF88 [Burkholderia sp. CCGE1003]
Length = 562
Score = 72.1 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 42/181 (23%), Positives = 66/181 (36%), Gaps = 25/181 (13%)
Query: 1 MFDPREKI--ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
M E + ALF D N+ + +D D + +L+ + ++ Y
Sbjct: 1 MASSNETVSMALFCDFENVALGVRDAKYDKFDIKLVLERLLLKGSIVVKKAYC------- 53
Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLE 114
+ +H F+++ R+ K+S D+ L VDA + +
Sbjct: 54 -DWDRYKSFKGAMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVN 105
Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
VI SGD F+ LV+ L+ K+V V S SD L D F L E
Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKQVIGVGVQQS----TSDLLIANCDEFFFYDDLVRESQ 161
Query: 175 R 175
R
Sbjct: 162 R 162
>gi|167573079|ref|ZP_02365953.1| hypothetical protein BoklC_24798 [Burkholderia oklahomensis C6786]
Length = 468
Score = 72.1 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/171 (23%), Positives = 64/171 (37%), Gaps = 23/171 (13%)
Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
ALF D N+ + F D + +L+ + ++ Y +
Sbjct: 2 ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124
+H F+++ R+ K+S D+ L VDA + ++ VI SGD
Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
F+ LV+ L+ K+V V S SD L D F+ L E R
Sbjct: 107 FSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLAREQQR 153
>gi|221201416|ref|ZP_03574455.1| protein of unknown function DUF88 [Burkholderia multivorans CGD2M]
gi|221208028|ref|ZP_03581034.1| protein of unknown function DUF88 [Burkholderia multivorans CGD2]
gi|221172213|gb|EEE04654.1| protein of unknown function DUF88 [Burkholderia multivorans CGD2]
gi|221178684|gb|EEE11092.1| protein of unknown function DUF88 [Burkholderia multivorans CGD2M]
Length = 479
Score = 72.1 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/171 (22%), Positives = 64/171 (37%), Gaps = 23/171 (13%)
Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
A+F D N+ + + D + +L+ + ++ Y +
Sbjct: 2 AVFCDFENVALGVRDAKYEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKGFK 53
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124
+H F+++ R+ K+S D+ L VDA + ++ VI SGD
Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVDTFVIVSGDSD 106
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
F+ LV+ L+ KKV V S SD L D F+ L E R
Sbjct: 107 FSPLVSKLRENAKKVIGVGVKKS----TSDLLVANCDEFIFYDDLVREQQR 153
>gi|221214025|ref|ZP_03586998.1| protein of unknown function DUF88 [Burkholderia multivorans CGD1]
gi|221166202|gb|EED98675.1| protein of unknown function DUF88 [Burkholderia multivorans CGD1]
Length = 479
Score = 72.1 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/171 (22%), Positives = 64/171 (37%), Gaps = 23/171 (13%)
Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
A+F D N+ + + D + +L+ + ++ Y +
Sbjct: 2 AVFCDFENVALGVRDAKYEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKGFK 53
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124
+H F+++ R+ K+S D+ L VDA + ++ VI SGD
Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVDTFVIVSGDSD 106
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
F+ LV+ L+ KKV V S SD L D F+ L E R
Sbjct: 107 FSPLVSKLRENAKKVIGVGVKKS----TSDLLVANCDEFIFYDDLVREQQR 153
>gi|171317829|ref|ZP_02907008.1| protein of unknown function DUF88 [Burkholderia ambifaria MEX-5]
gi|171096994|gb|EDT41862.1| protein of unknown function DUF88 [Burkholderia ambifaria MEX-5]
Length = 643
Score = 72.1 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/178 (21%), Positives = 67/178 (37%), Gaps = 23/178 (12%)
Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
A+F D N+ + + D + +L+ + ++ Y +
Sbjct: 11 AVFCDFENVALGVRDAKYEKFDIQPVLERLLLKGSIVVKKAYC--------DWERYKGFK 62
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124
+H F+++ R+ K+S D+ L VDA + ++ VI SGD
Sbjct: 63 ASMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGDSD 115
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182
F+ LV+ L+ KKV V S SD L D F+ L E R + ++
Sbjct: 116 FSPLVSKLRENAKKVIGVGVKKS----TSDLLVANCDEFIFYDDLVREQQRAQAKREQ 169
>gi|256810620|ref|YP_003127989.1| protein of unknown function DUF88 [Methanocaldococcus fervens AG86]
gi|256793820|gb|ACV24489.1| protein of unknown function DUF88 [Methanocaldococcus fervens AG86]
Length = 195
Score = 72.1 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 58/164 (35%), Gaps = 32/164 (19%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
+IAL IDG N+ F+ID K+ + ++ Y L
Sbjct: 24 RIALLIDGPNM----LRKEFNIDLDKIREVLSEFGDIVIGRVYLNQYASD--------KL 71
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124
++ + GF+ +DVE+AVDA E ++ + + D
Sbjct: 72 IEAVINQGFEPKI--------------SAGDVDVEMAVDATELVFNPNIDTIAYVTRDAD 117
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
F + + + KKV ++ S L+ ADY + +
Sbjct: 118 FLPAIRKAKERGKKVIVIGAEPGF----STALQNIADYVIKIGE 157
>gi|241766896|ref|ZP_04764705.1| protein of unknown function DUF88 [Acidovorax delafieldii 2AN]
gi|241362653|gb|EER58487.1| protein of unknown function DUF88 [Acidovorax delafieldii 2AN]
Length = 316
Score = 72.1 bits (176), Expect = 3e-11, Method: Composition-based stats.
Identities = 47/191 (24%), Positives = 69/191 (36%), Gaps = 33/191 (17%)
Query: 1 MFDPREKI--ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
M P + I ALF D N+ + +D D + +L+ + ++ Y
Sbjct: 1 MASPTDSISMALFCDFENVALGVRDAKYDKFDIKPVLERLLLKGSIVVKKAYC------- 53
Query: 58 QQFSPLHPLLDWLHYNGFQVVAKV----AKEFTENCGRKRVKSSMDVELAVDAFEQ---S 110
DW Y GF+ E R+ K+S D+ L VDA +
Sbjct: 54 ----------DWERYKGFKATMHEANFELIEIPHV--RQSGKNSADIRLVVDALDLCYTK 101
Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
+ VI SGD F+ LV+ L+ K+V V S SD L D F+ L
Sbjct: 102 SHVNTFVIISGDSDFSPLVSKLRENAKQVIGVGVKQS----TSDLLIANCDEFIFYDDLV 157
Query: 171 NEIARDPDEDK 181
E R +
Sbjct: 158 RESQRAQARRQ 168
>gi|303232840|ref|ZP_07319524.1| conserved hypothetical protein [Atopobium vaginae PB189-T1-4]
gi|302481030|gb|EFL44106.1| conserved hypothetical protein [Atopobium vaginae PB189-T1-4]
Length = 260
Score = 71.7 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 62/183 (33%), Gaps = 31/183 (16%)
Query: 4 PREKIALFIDGANLYA---------SSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVG 54
P+ +A+FID N +S+ D + + + + Y
Sbjct: 5 PQRSLAVFIDYENFAYGAAGAAHKRTSRTHRKTPDMKSVFGRLVDKGRITVKRAYC---- 60
Query: 55 DPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SE 111
+ + LH G + E + K+S D+ LAVDA E E
Sbjct: 61 ----DWQRFKQDITPLHELGIE-----LIEIPDRSSTG--KNSADIRLAVDATEMCLTKE 109
Query: 112 GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
++ I SGD F+ LVA L+ K V + + S L D F+ +
Sbjct: 110 HIDTFAILSGDSDFSPLVAKLKEFGKTV----IGIGAEPITSSLLVEVCDEFIFYEDIVA 165
Query: 172 EIA 174
+
Sbjct: 166 QAG 168
>gi|76803018|ref|YP_331113.1| hypothetical protein NP4776A [Natronomonas pharaonis DSM 2160]
gi|76558883|emb|CAI50479.2| conserved hypothetical protein [Natronomonas pharaonis DSM 2160]
Length = 145
Score = 71.7 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 35/163 (21%), Positives = 61/163 (37%), Gaps = 31/163 (19%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
++ +F+DG N++ + FD+D +L + A Y + L
Sbjct: 12 RVGIFVDGPNVFRA----EFDVDLDELRALAGDEGTIAVARVYV--------DENASGGL 59
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124
+ GF+VV +DV+LAVDA E + E ++ +V+ S D
Sbjct: 60 IQAAEARGFEVVT--------------TSGDVDVKLAVDAVEAAVDEQVDTVVVVSRDTD 105
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
F ++ ++ V+ SD LR A + L
Sbjct: 106 FKPVLETAAKRGLHTVAVAPGTHGR---SDALRNAAHDEITLE 145
>gi|225165594|ref|ZP_03727408.1| protein of unknown function DUF88 [Opitutaceae bacterium TAV2]
gi|224800165|gb|EEG18581.1| protein of unknown function DUF88 [Opitutaceae bacterium TAV2]
Length = 265
Score = 71.7 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 36/166 (21%), Positives = 62/166 (37%), Gaps = 23/166 (13%)
Query: 8 IALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
+A+F+D N+ ++ F D K+ + + ++ Y F
Sbjct: 10 LAVFLDLENIARGAQDARFPQFDIGKVFERLLIKGNIVVKKAYC--------DFERYKDF 61
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDG 123
LH F+++ R+ K+S D+ + VDA + + ++ I SGD
Sbjct: 62 KRPLHEAAFELIEIPHV-------RQSGKNSADIRMVVDALDLCYTNDHVDAFAIISGDS 114
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
F+ LV+ L+ K V V S SD D F+ L
Sbjct: 115 DFSPLVSKLRENGKTVIGVGVKNS----TSDLFIANCDEFIYYDDL 156
>gi|115351126|ref|YP_772965.1| hypothetical protein Bamb_1072 [Burkholderia ambifaria AMMD]
gi|115281114|gb|ABI86631.1| protein of unknown function DUF88 [Burkholderia ambifaria AMMD]
Length = 507
Score = 71.7 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 39/178 (21%), Positives = 67/178 (37%), Gaps = 23/178 (12%)
Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
A+F D N+ + + D + +L+ + ++ Y +
Sbjct: 11 AVFCDFENVALGVRDAKYEKFDIQPVLERLLLKGSIVVKKAYC--------DWERYKGFK 62
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124
+H F+++ R+ K+S D+ L VDA + ++ VI SGD
Sbjct: 63 ASMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGDSD 115
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182
F+ LV+ L+ KKV V S SD L D F+ L E R + ++
Sbjct: 116 FSPLVSKLRENAKKVIGVGVKKS----TSDLLVANCDEFIFYDDLVREQQRAQAKREQ 169
>gi|289193218|ref|YP_003459159.1| protein of unknown function DUF88 [Methanocaldococcus sp. FS406-22]
gi|288939668|gb|ADC70423.1| protein of unknown function DUF88 [Methanocaldococcus sp. FS406-22]
Length = 202
Score = 71.7 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 58/164 (35%), Gaps = 32/164 (19%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
+IAL IDG N+ F+ID K+ + ++ Y L
Sbjct: 24 RIALLIDGPNM----LRKEFNIDLDKIREVLSEFGDIVIGRVYLNQYASD--------KL 71
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124
++ + GF+ +DVE+AVDA E ++ + + D
Sbjct: 72 IEAVINQGFEPKI--------------SAGDVDVEMAVDATELVFNPNIDTIAYVTRDAD 117
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
F + + + KKV ++ S L+ ADY + +
Sbjct: 118 FLPAIRKAKERGKKVIVIGAEPGF----STALQNIADYVIKIGE 157
>gi|161525283|ref|YP_001580295.1| hypothetical protein Bmul_2113 [Burkholderia multivorans ATCC
17616]
gi|189349979|ref|YP_001945607.1| hypothetical protein BMULJ_01131 [Burkholderia multivorans ATCC
17616]
gi|160342712|gb|ABX15798.1| protein of unknown function DUF88 [Burkholderia multivorans ATCC
17616]
gi|189334001|dbj|BAG43071.1| conserved hypothetical protein [Burkholderia multivorans ATCC
17616]
Length = 508
Score = 71.7 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 39/171 (22%), Positives = 65/171 (38%), Gaps = 23/171 (13%)
Query: 9 ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
A+F D N+ + ++ D + +L+ + ++ Y +
Sbjct: 11 AVFCDFENVALGVRDAKYEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKGFK 62
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124
+H F+++ R+ K+S D+ L VDA + ++ VI SGD
Sbjct: 63 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVDTFVIVSGDSD 115
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
F+ LV+ L+ KKV V S SD L D F+ L E R
Sbjct: 116 FSPLVSKLRENAKKVIGVGVKKS----TSDLLVANCDEFIFYDDLVREQQR 162
>gi|256829512|ref|YP_003158240.1| hypothetical protein Dbac_1733 [Desulfomicrobium baculatum DSM
4028]
gi|256578688|gb|ACU89824.1| protein of unknown function DUF88 [Desulfomicrobium baculatum DSM
4028]
Length = 209
Score = 71.7 bits (175), Expect = 4e-11, Method: Composition-based stats.
Identities = 38/192 (19%), Positives = 68/192 (35%), Gaps = 34/192 (17%)
Query: 11 FIDGANLY---ASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
ID L+ S ++ G++ Y +L ++ RAYY + P H L
Sbjct: 9 LIDAGYLFNARHSVRS-GYEFSYLRLRNYLEQDGLIWRAYYLNSTPNPPSDGQDNFHRWL 67
Query: 68 DWLHYNGFQVVAKVA--------KEFTENCGRK------------------RVKSSMDVE 101
G +++ K K + E CG+K ++ +DV
Sbjct: 68 RSGPPFGPKIITKFYTLKQQRADKAYCEECGQKVSLRCQNQHGDFTHRVFNEIQKGVDVA 127
Query: 102 LAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
+A + E L++ SGD V L + K + +V S +L+ +AD
Sbjct: 128 IATLSLIHQRNYETLMLSSGDSDLLDAVEHLSEQGKSIELVVFRDG----VSSELQCRAD 183
Query: 162 YFMDLAYLKNEI 173
+ +E+
Sbjct: 184 RIYWINDFASEV 195
>gi|295677487|ref|YP_003606011.1| protein of unknown function DUF88 [Burkholderia sp. CCGE1002]
gi|295437330|gb|ADG16500.1| protein of unknown function DUF88 [Burkholderia sp. CCGE1002]
Length = 515
Score = 71.7 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 42/181 (23%), Positives = 66/181 (36%), Gaps = 25/181 (13%)
Query: 1 MFDPREKI--ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
M E + ALF D N+ + +D D + +L+ + ++ Y
Sbjct: 1 MASSNENVSMALFCDFENVALGVRDAKYDKFDIKLVLERLLLKGSIVVKKAYC------- 53
Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLE 114
+ +H F+++ R+ K+S D+ L VDA + +
Sbjct: 54 -DWDRYKSFKGAMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVN 105
Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
VI SGD F+ LV+ L+ K+V V S SD L D F L E
Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKQVIGVGVQQS----TSDLLIANCDEFFFYDDLVRESQ 161
Query: 175 R 175
R
Sbjct: 162 R 162
>gi|83717296|ref|YP_439296.1| hypothetical protein BTH_II1099 [Burkholderia thailandensis E264]
gi|83651121|gb|ABC35185.1| Protein of unknown function family [Burkholderia thailandensis
E264]
Length = 472
Score = 71.7 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 42/181 (23%), Positives = 70/181 (38%), Gaps = 25/181 (13%)
Query: 1 MFDPREKI--ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
M P++ + ALF D N+ + F+ D + +L+ + ++ Y
Sbjct: 1 MALPQDSVNMALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC------- 53
Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLE 114
+ +H F+++ R+ K+S D+ L VDA + ++
Sbjct: 54 -DWDRYKTFKAAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVD 105
Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
VI SGD F+ LV+ L+ K+V V S SD L D F+ L E
Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLAREQQ 161
Query: 175 R 175
R
Sbjct: 162 R 162
>gi|182414934|ref|YP_001820000.1| hypothetical protein Oter_3120 [Opitutus terrae PB90-1]
gi|177842148|gb|ACB76400.1| protein of unknown function DUF88 [Opitutus terrae PB90-1]
Length = 264
Score = 71.3 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 26/179 (14%)
Query: 8 IALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
+A+F+D N+ ++ F +D K+L+ + ++ Y F L
Sbjct: 10 LAVFLDLENIAHGARDAHFPPLDISKVLERLLLKGNIVVKKAYC--------DFDRFKEL 61
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDG 123
LH F+++ R+ K+S D+ + VDA + + ++ I SGD
Sbjct: 62 KRDLHEAAFELIEIPHV-------RQSGKNSADIRMVVDALDLCYTNQHVDAFAIISGDS 114
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182
F+ LV+ L+ K V L + SD D F+ L + P + +
Sbjct: 115 DFSPLVSKLRENAKTV----IGLGVKNSTSDLFIANCDEFIYYDDL---VRAQPAKPAR 166
>gi|307305137|ref|ZP_07584886.1| protein of unknown function DUF88 [Sinorhizobium meliloti BL225C]
gi|306902477|gb|EFN33072.1| protein of unknown function DUF88 [Sinorhizobium meliloti BL225C]
Length = 92
Score = 71.3 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 42/86 (48%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
MFD REKIAL +DG NLYA+SKALGFDIDY KLL+AFR RA ++R T P
Sbjct: 1 MFDHREKIALLMDGPNLYAASKALGFDIDYCKLLEAFRKRAYLLRGQLLRTFGRRPGNAD 60
Query: 61 SPLHPLLDWLHYN--GFQVVAKVAKE 84
PL L L + G Q ++ +
Sbjct: 61 DPLAHRLARLQWIPDGHQADQRIHRH 86
>gi|187925165|ref|YP_001896807.1| hypothetical protein Bphyt_3191 [Burkholderia phytofirmans PsJN]
gi|187716359|gb|ACD17583.1| protein of unknown function DUF88 [Burkholderia phytofirmans PsJN]
Length = 478
Score = 71.3 bits (174), Expect = 5e-11, Method: Composition-based stats.
Identities = 42/182 (23%), Positives = 66/182 (36%), Gaps = 25/182 (13%)
Query: 1 MFDPREKI--ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
M E + ALF D N+ + +D D + +L+ + ++ Y
Sbjct: 1 MASSNETVSMALFCDFENVALGVRDAKYDKFDIKLVLERLLLKGSIVVKKAYC------- 53
Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLE 114
+ +H F+++ R+ K+S D+ L VDA + +
Sbjct: 54 -DWDRYKSFKGAMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVN 105
Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
VI SGD F+ LV+ L+ K+V V S SD L D F L E
Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKQVIGVGVQQS----TSDLLIANCDEFFFYDDLVRESQ 161
Query: 175 RD 176
R
Sbjct: 162 RT 163
>gi|167577696|ref|ZP_02370570.1| hypothetical protein BthaT_06146 [Burkholderia thailandensis TXDOH]
Length = 463
Score = 71.3 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 40/171 (23%), Positives = 65/171 (38%), Gaps = 23/171 (13%)
Query: 9 ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
ALF D N+ + F+ D + +L+ + ++ Y +
Sbjct: 2 ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124
+H F+++ R+ K+S D+ L VDA + ++ VI SGD
Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
F+ LV+ L+ K+V V S SD L D F+ L E R
Sbjct: 107 FSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLAREQQR 153
>gi|329906041|ref|ZP_08274342.1| hypothetical protein IMCC9480_2751 [Oxalobacteraceae bacterium
IMCC9480]
gi|327547373|gb|EGF32203.1| hypothetical protein IMCC9480_2751 [Oxalobacteraceae bacterium
IMCC9480]
Length = 284
Score = 70.9 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/169 (21%), Positives = 63/169 (37%), Gaps = 23/169 (13%)
Query: 9 ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
ALF D N+ + + D RK+L+ + ++ Y +
Sbjct: 11 ALFCDFENVALGVRDAKYAAFDIRKVLERLLLKGNIVVKKAYC--------DWDRYKDFK 62
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124
+H F+++ R+ K+S D+ + VDA + ++ VI SGD
Sbjct: 63 AAMHEAAFELIEIPHV-------RQSGKNSADIRMVVDALDLCYTKAHVDTFVILSGDSD 115
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
F+ LV+ L+ K+V V SD L D F+ L +
Sbjct: 116 FSPLVSKLRENNKRVIGV----GVKDSTSDLLSANCDEFIFYDDLVQVV 160
>gi|167615822|ref|ZP_02384457.1| hypothetical protein BthaB_05981 [Burkholderia thailandensis Bt4]
gi|257142413|ref|ZP_05590675.1| hypothetical protein BthaA_24818 [Burkholderia thailandensis E264]
Length = 463
Score = 70.9 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 40/171 (23%), Positives = 65/171 (38%), Gaps = 23/171 (13%)
Query: 9 ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
ALF D N+ + F+ D + +L+ + ++ Y +
Sbjct: 2 ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124
+H F+++ R+ K+S D+ L VDA + ++ VI SGD
Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
F+ LV+ L+ K+V V S SD L D F+ L E R
Sbjct: 107 FSPLVSKLRENAKRVIGVGVKNS----TSDLLVANCDEFIFYDDLAREQQR 153
>gi|261402330|ref|YP_003246554.1| protein of unknown function DUF88 [Methanocaldococcus vulcanius M7]
gi|261369323|gb|ACX72072.1| protein of unknown function DUF88 [Methanocaldococcus vulcanius M7]
Length = 216
Score = 70.9 bits (173), Expect = 7e-11, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 58/164 (35%), Gaps = 32/164 (19%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
+IAL IDG N+ F+ID K+ + ++ Y L
Sbjct: 38 RIALLIDGPNM----LRKEFNIDLDKIREVLNEFGDIVIGRVYLNQYASD--------KL 85
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124
++ + GF+ +DVE+AVDA E ++ + + D
Sbjct: 86 IEAVINQGFEPKI--------------SAGDVDVEMAVDATELVFNPNIDTIAYVTRDAD 131
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
F + + + KKV ++ S L+ ADY + +
Sbjct: 132 FLPAIRKAKERGKKVIVIGAEPGF----STALQNIADYVIKIGE 171
>gi|301166431|emb|CBW26007.1| hypothetical protein BMS_1128 [Bacteriovorax marinus SJ]
Length = 190
Score = 70.5 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 34/180 (18%), Positives = 70/180 (38%), Gaps = 28/180 (15%)
Query: 6 EKIALFIDGANL----YASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
+++A+ +DG N+ +A S+ +++ L+ + R Y+ +
Sbjct: 9 QQVAVLVDGNNIERSIHAESERHSTMLNFDTLIPKLLVNRGLNRLIYFREGKNISSKLAE 68
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
LH Y+G + S D+ L++ A + ++ ++ ++I SG
Sbjct: 69 RLHD-----KYHG---------------SVRPCHKSADIPLSIKATQLAQKVDTIIIMSG 108
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
D + LV L+ + +V I + S S L +ADYF + + P +
Sbjct: 109 DSDYIELVNHLKSEGVRVEIAAI----ESTTSHLLIEEADYFHPITSDDWFTLKLPSNKR 164
>gi|172060127|ref|YP_001807779.1| hypothetical protein BamMC406_1072 [Burkholderia ambifaria MC40-6]
gi|171992644|gb|ACB63563.1| protein of unknown function DUF88 [Burkholderia ambifaria MC40-6]
Length = 501
Score = 70.5 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 39/178 (21%), Positives = 67/178 (37%), Gaps = 23/178 (12%)
Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
A+F D N+ + + D + +L+ + ++ Y +
Sbjct: 11 AVFCDFENVALGVRDAKYEKFDIQPVLERLLLKGSIVVKKAYC--------DWERYKGFK 62
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124
+H F+++ R+ K+S D+ L VDA + ++ VI SGD
Sbjct: 63 ASMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGDSD 115
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182
F+ LV+ L+ KKV V S SD L D F+ L E R + ++
Sbjct: 116 FSPLVSKLRENAKKVIGVGVKKS----TSDLLVANCDEFIFYDDLVREQQRAQAKREQ 169
>gi|325525773|gb|EGD03507.1| hypothetical protein B1M_16120 [Burkholderia sp. TJI49]
Length = 287
Score = 70.5 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 39/171 (22%), Positives = 64/171 (37%), Gaps = 23/171 (13%)
Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
A+F D N+ + + D + +L+ + ++ Y +
Sbjct: 2 AVFCDFENVALGVRDAKYEKFDIKPVLERLLLKGSIVVKKAYC--------DWDRYKGFK 53
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124
+H F+++ R+ K+S D+ L VDA + ++ VI SGD
Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGDSD 106
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
F+ LV+ L+ KKV V S SD L D F+ L E R
Sbjct: 107 FSPLVSKLRENAKKVIGVGVKKS----TSDLLVANCDEFIFYDDLVREQQR 153
>gi|296109488|ref|YP_003616437.1| protein of unknown function DUF88 [Methanocaldococcus infernus ME]
gi|295434302|gb|ADG13473.1| protein of unknown function DUF88 [Methanocaldococcus infernus ME]
Length = 173
Score = 70.5 bits (172), Expect = 8e-11, Method: Composition-based stats.
Identities = 34/163 (20%), Positives = 59/163 (36%), Gaps = 32/163 (19%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
KIAL IDG N+ F+ID K+ + ++ Y L
Sbjct: 24 KIALLIDGPNM----LRKEFNIDLDKIREILSEFGDIVIGRVYL--------NQYASEKL 71
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124
++ + GF+ +DVE+AVDA E ++ + + D
Sbjct: 72 IEAVINQGFEPKI--------------SAGDVDVEMAVDATELVFNPNIDTIAYVTRDAD 117
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
F + + K KK+ ++ S L++ ADY + +
Sbjct: 118 FLPAIRKAKEKGKKIIVIGAEPGF----SKALQKIADYVIKIN 156
>gi|209517483|ref|ZP_03266324.1| protein of unknown function DUF88 [Burkholderia sp. H160]
gi|209502137|gb|EEA02152.1| protein of unknown function DUF88 [Burkholderia sp. H160]
Length = 505
Score = 70.5 bits (172), Expect = 9e-11, Method: Composition-based stats.
Identities = 42/181 (23%), Positives = 66/181 (36%), Gaps = 25/181 (13%)
Query: 1 MFDPREKI--ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
M E + ALF D N+ + +D D + +L+ + ++ Y
Sbjct: 1 MASSNENVSMALFCDFENVALGVRDAKYDKFDIKLVLERLLLKGSIVVKKAYC------- 53
Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLE 114
+ +H F+++ R+ K+S D+ L VDA + +
Sbjct: 54 -DWDRYKSFKGAMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVN 105
Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
VI SGD F+ LV+ L+ K+V V S SD L D F L E
Sbjct: 106 TFVIISGDSDFSPLVSKLRENDKQVIGVGVQQS----TSDLLIANCDEFFFYDDLVRESQ 161
Query: 175 R 175
R
Sbjct: 162 R 162
>gi|197123307|ref|YP_002135258.1| hypothetical protein AnaeK_2905 [Anaeromyxobacter sp. K]
gi|196173156|gb|ACG74129.1| protein of unknown function DUF88 [Anaeromyxobacter sp. K]
Length = 253
Score = 70.5 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/170 (21%), Positives = 57/170 (33%), Gaps = 26/170 (15%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
++IALFID NL + D + L + V+ Y
Sbjct: 5 HSDQRIALFIDFENLVTRTGLSAETFDLQPALDTLLEKGKVVYRRAYA------------ 52
Query: 63 LHPLLDWLHYNGFQVVAKVA-KEFTENCGRKRV-KSSMDVELAVDAFEQS---EGLEHLV 117
DW ++ E + R K+ D+ L +DA E + E ++ V
Sbjct: 53 -----DWTRFSAATPRLHEKGVELVDVPPSTRAGKNGADMRLVIDALELAYLREHIDTFV 107
Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
I SGD F L L+ + V ++ S + D F+ L
Sbjct: 108 IASGDSDFCPLAYKLRENDRTV----IGMAVREATSPLFVKACDEFIYLR 153
>gi|91785005|ref|YP_560211.1| hypothetical protein Bxe_A0775 [Burkholderia xenovorans LB400]
gi|91688959|gb|ABE32159.1| Conserved hypothetical protein [Burkholderia xenovorans LB400]
Length = 480
Score = 70.5 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/182 (23%), Positives = 66/182 (36%), Gaps = 25/182 (13%)
Query: 1 MFDPREKI--ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
M E + ALF D N+ + +D D + +L+ + ++ Y
Sbjct: 1 MASSNETVSMALFCDFENVALGVRDAKYDKFDIKLVLERLLLKGSIVVKKAYC------- 53
Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLE 114
+ +H F+++ R+ K+S D+ L VDA + +
Sbjct: 54 -DWDRYKSFKGAMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVN 105
Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
VI SGD F+ LV+ L+ K+V V S SD L D F L E
Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKQVIGVGVQQS----TSDLLVANCDEFFFYDDLVRESQ 161
Query: 175 RD 176
R
Sbjct: 162 RT 163
>gi|171909553|ref|ZP_02925023.1| hypothetical protein VspiD_00235 [Verrucomicrobium spinosum DSM
4136]
Length = 312
Score = 70.2 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/178 (18%), Positives = 69/178 (38%), Gaps = 24/178 (13%)
Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
A+++D N+ ++ + +D +K+++ + ++ Y +
Sbjct: 54 AVYLDLENIVLGAQEARYPKVDIQKIMERLLLKGHIVTKKAYC--------DWERYKDFK 105
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124
LH ++++ R+ K+S D+ + VDA + ++ VI SGD
Sbjct: 106 RPLHEAAYELIEIPHV-------RQSGKNSADIRMVVDALDLCYTKGHVDTFVIISGDSD 158
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL-KNEIARDPDEDK 181
F+ LV+ L+ K V + + S+ D F+ L + E +R K
Sbjct: 159 FSPLVSKLRENAKTV----IGMGVKNSTSNLFITNCDEFIYYDDLVRKEQSRASRSTK 212
>gi|220918096|ref|YP_002493400.1| protein of unknown function DUF88 [Anaeromyxobacter dehalogenans
2CP-1]
gi|219955950|gb|ACL66334.1| protein of unknown function DUF88 [Anaeromyxobacter dehalogenans
2CP-1]
Length = 253
Score = 70.2 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/170 (21%), Positives = 57/170 (33%), Gaps = 26/170 (15%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
++IALFID NL + D + L + V+ Y
Sbjct: 5 HSDQRIALFIDFENLVTRTGLSAETFDLQPALDTLLEKGKVVYRRAYA------------ 52
Query: 63 LHPLLDWLHYNGFQVVAKVA-KEFTENCGRKRV-KSSMDVELAVDAFEQS---EGLEHLV 117
DW ++ E + R K+ D+ L +DA E + E ++ V
Sbjct: 53 -----DWTRFSAATPRLHEKGVELVDVPPSTRAGKNGADMRLVIDALELAYLREHIDTFV 107
Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
I SGD F L L+ + V ++ S + D F+ L
Sbjct: 108 IASGDSDFCPLAYKLRENDRTV----IGMAVREATSPLFVKACDEFIYLR 153
>gi|296157195|ref|ZP_06840031.1| protein of unknown function DUF88 [Burkholderia sp. Ch1-1]
gi|295892531|gb|EFG72313.1| protein of unknown function DUF88 [Burkholderia sp. Ch1-1]
Length = 479
Score = 70.2 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/182 (23%), Positives = 66/182 (36%), Gaps = 25/182 (13%)
Query: 1 MFDPREKI--ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
M E + ALF D N+ + +D D + +L+ + ++ Y
Sbjct: 1 MASSNETVSMALFCDFENVALGVRDAKYDKFDIKLVLERLLLKGSIVVKKAYC------- 53
Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLE 114
+ +H F+++ R+ K+S D+ L VDA + +
Sbjct: 54 -DWDRYKSFKGAMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVN 105
Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
VI SGD F+ LV+ L+ K+V V S SD L D F L E
Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKQVIGVGVQQS----TSDLLVANCDEFFFYDDLVRESQ 161
Query: 175 RD 176
R
Sbjct: 162 RT 163
>gi|134295221|ref|YP_001118956.1| hypothetical protein Bcep1808_1110 [Burkholderia vietnamiensis G4]
gi|134138378|gb|ABO54121.1| protein of unknown function DUF88 [Burkholderia vietnamiensis G4]
Length = 507
Score = 70.2 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/171 (22%), Positives = 65/171 (38%), Gaps = 23/171 (13%)
Query: 9 ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
A+F D N+ + ++ D + +L+ + ++ Y +
Sbjct: 11 AVFCDFENVALGVRDAKYEKFDIKPVLERLLLKGSIVVKKAYC--------DWERYKGFK 62
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124
+H F+++ R+ K+S D+ L VDA + ++ VI SGD
Sbjct: 63 ASMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGDSD 115
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
F+ LV+ L+ KKV V S SD L D F+ L E R
Sbjct: 116 FSPLVSKLRENAKKVIGVGVKKS----TSDLLVANCDEFIFYDDLVREQQR 162
>gi|170732518|ref|YP_001764465.1| hypothetical protein Bcenmc03_1168 [Burkholderia cenocepacia MC0-3]
gi|169815760|gb|ACA90343.1| protein of unknown function DUF88 [Burkholderia cenocepacia MC0-3]
Length = 498
Score = 70.2 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/171 (22%), Positives = 65/171 (38%), Gaps = 23/171 (13%)
Query: 9 ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
A+F D N+ + ++ D + +L+ + ++ Y +
Sbjct: 11 AVFCDFENVALGVRDAKYEKFDIKPVLERLLLKGSIVVKKAYC--------DWDRYKGFK 62
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124
+H F+++ R+ K+S D+ L VDA + ++ VI SGD
Sbjct: 63 ASMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGDSD 115
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
F+ LV+ L+ KKV V S SD L D F+ L E R
Sbjct: 116 FSPLVSKLRENAKKVIGVGVKKS----TSDLLVANCDEFIFYDDLVREQQR 162
>gi|78065774|ref|YP_368543.1| hypothetical protein Bcep18194_A4302 [Burkholderia sp. 383]
gi|77966519|gb|ABB07899.1| protein of unknown function DUF88 [Burkholderia sp. 383]
Length = 496
Score = 70.2 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/171 (22%), Positives = 65/171 (38%), Gaps = 23/171 (13%)
Query: 9 ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
A+F D N+ + ++ D + +L+ + ++ Y +
Sbjct: 11 AVFCDFENVALGVRDAKYEKFDIKPVLERLLLKGSIVVKKAYC--------DWDRYKGFK 62
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124
+H F+++ R+ K+S D+ L VDA + ++ VI SGD
Sbjct: 63 ASMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGDSD 115
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
F+ LV+ L+ KKV V S SD L D F+ L E R
Sbjct: 116 FSPLVSKLRENAKKVIGVGVKKS----TSDLLVANCDEFIFYDDLVREQQR 162
>gi|254482849|ref|ZP_05096086.1| hypothetical protein GPB2148_1333 [marine gamma proteobacterium
HTCC2148]
gi|214036930|gb|EEB77600.1| hypothetical protein GPB2148_1333 [marine gamma proteobacterium
HTCC2148]
Length = 64
Score = 70.2 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 5 REKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58
EKI++F+D N+Y + + + DY + +I AY Y T GD +Q
Sbjct: 1 MEKISIFVDVQNIYYTCRQTYQRNFDYNRFWVEITQGRELIGAYAYATDRGDAKQ 55
>gi|229819539|ref|YP_002881065.1| protein of unknown function DUF88 [Beutenbergia cavernae DSM 12333]
gi|229565452|gb|ACQ79303.1| protein of unknown function DUF88 [Beutenbergia cavernae DSM 12333]
Length = 378
Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 63/167 (37%), Gaps = 23/167 (13%)
Query: 3 DPREKIALFIDGANLYASSKAL--GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
D E++A+F+D NL ++ G D+ + A R V+ Y + +
Sbjct: 2 DADERLAVFLDYENLALGAREHLGGMAFDFGPIADALAVRGRVVVRRAYADWSYFDDDRR 61
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLV 117
+ + E + G R + D+++ VDA E + E + V
Sbjct: 62 ALTRHQV-------------ELIEMPQRMGASRKNA-ADIKMVVDAIEMAFEREYISTFV 107
Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
+ +GD F+ LV L+ K+V V S S L D F+
Sbjct: 108 MCTGDSDFSPLVHKLRELNKRVIGVGVENS----TSRLLPPACDEFL 150
>gi|308233771|ref|ZP_07664508.1| hypothetical protein AvagD15_01897 [Atopobium vaginae DSM 15829]
gi|328943670|ref|ZP_08241135.1| hypothetical protein HMPREF0091_10360 [Atopobium vaginae DSM 15829]
gi|327491639|gb|EGF23413.1| hypothetical protein HMPREF0091_10360 [Atopobium vaginae DSM 15829]
Length = 260
Score = 69.8 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/187 (20%), Positives = 66/187 (35%), Gaps = 32/187 (17%)
Query: 1 MFDPREK-IALFIDGANLYASSKAL---------GFDIDYRKLLKAFRSRAIVIRAYYYT 50
M D ++ IA+FID N A + A + + + + + Y
Sbjct: 1 MSDINQRSIAVFIDYENFAAGAGASKNKASAHGKRTQPNMKCVFSRLVDKGRITLKRAYC 60
Query: 51 TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ- 109
+ + LH G + E + K+S D+ LAVDA E
Sbjct: 61 --------DWQRFKQDVTPLHELGIE-----LIEIPDRSSTG--KNSADIRLAVDATEMC 105
Query: 110 --SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
+ ++ VI SGD F+ LV+ L+ K V + + S L D F+
Sbjct: 106 LTKDHIDTFVILSGDSDFSPLVSKLKEFGKTV----IGIGAKPITSSLLVEVCDEFIFYE 161
Query: 168 YLKNEIA 174
+ ++
Sbjct: 162 DILSQAG 168
>gi|261415964|ref|YP_003249647.1| protein of unknown function DUF88 [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261372420|gb|ACX75165.1| protein of unknown function DUF88 [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302326593|gb|ADL25794.1| conserved domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 384
Score = 69.8 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 64/159 (40%), Gaps = 24/159 (15%)
Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
IA+FID NL K G L+ ++ Y + L PL
Sbjct: 4 IAIFIDAENLTNWVKNNGVQ----SLMDELLPLGQIVVRKAY------GKWSTPQLIPLQ 53
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCF 125
L+ NGF+ + F G K+S D+++ VD E + ++ +V+ +GD F
Sbjct: 54 SALNENGFE----LVHTFHPVSG----KNSTDIKMTVDTMEVALDSQVQWIVLATGDSDF 105
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
+ L L+ + K+V V S S+ ++ ++
Sbjct: 106 SPLFRKLREQGKEVIGV----GPKSPLSECVKNSCSRYI 140
>gi|108762087|ref|YP_628313.1| hypothetical protein MXAN_0030 [Myxococcus xanthus DK 1622]
gi|108465967|gb|ABF91152.1| conserved hypothetical protein [Myxococcus xanthus DK 1622]
Length = 320
Score = 69.8 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/181 (20%), Positives = 62/181 (34%), Gaps = 26/181 (14%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
+IALFID NL ++ D + L + V+ Y
Sbjct: 9 RIALFIDFENLVTNTGISSASFDLQPSLDRLLEKGKVVFRRAYC---------------- 52
Query: 67 LDWLHYNGFQVVAKVA-KEFTENCGRKRV-KSSMDVELAVDAFEQS---EGLEHLVIFSG 121
DW + ++ E + R K+ D+ L +DA E E ++ VI SG
Sbjct: 53 -DWSRFAEAKIRLHEFGVELIDVPPSTRAGKNGADMRLVIDALELCYARESIDTFVIGSG 111
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
D F L L+ + V L+ S + D F+ L ++ + E
Sbjct: 112 DSDFCPLAYKLRENGRTV----IGLAVKESTSPLFVKACDEFIYLRPRQSRSDKGDKEKG 167
Query: 182 K 182
+
Sbjct: 168 R 168
>gi|219848822|ref|YP_002463255.1| hypothetical protein Cagg_1924 [Chloroflexus aggregans DSM 9485]
gi|219543081|gb|ACL24819.1| protein of unknown function DUF88 [Chloroflexus aggregans DSM 9485]
Length = 334
Score = 69.8 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 61/163 (37%), Gaps = 29/163 (17%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
+IAL IDG N A++ A ++++ + I++ Y Q++
Sbjct: 24 RIALLIDGENC-AATYA-------DQVMEMADKQGILVTRRVYANWSVSAHQKWIEAVAR 75
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGC 124
D L + G KS++D+ L +DA + + + +GDG
Sbjct: 76 YD-LRPIYY-------------AGIAPGKSTIDMVLTIDAMDLHYRQVCDDFCLVTGDGD 121
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
+ LV L+ V ++ T + L+ F+ LA
Sbjct: 122 YAPLVKRLRAGGANVIVIGTEQ-----TATVLKEVCSTFIPLA 159
>gi|206559459|ref|YP_002230220.1| hypothetical protein BCAL1072 [Burkholderia cenocepacia J2315]
gi|198035497|emb|CAR51375.1| conserved hypothetical protein [Burkholderia cenocepacia J2315]
Length = 491
Score = 69.8 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/171 (22%), Positives = 65/171 (38%), Gaps = 23/171 (13%)
Query: 9 ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
A+F D N+ + ++ D + +L+ + ++ Y +
Sbjct: 11 AVFCDFENVALGVRDAKYEKFDIKPVLERLLLKGSIVVKKAYC--------DWDRYKGFK 62
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124
+H F+++ R+ K+S D+ L VDA + ++ VI SGD
Sbjct: 63 ASMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGDSD 115
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
F+ LV+ L+ KKV V S SD L D F+ L E R
Sbjct: 116 FSPLVSKLRENAKKVIGVGVKKS----TSDLLVANCDEFIFYDDLVREQQR 162
>gi|254245848|ref|ZP_04939169.1| hypothetical protein BCPG_00568 [Burkholderia cenocepacia PC184]
gi|124870624|gb|EAY62340.1| hypothetical protein BCPG_00568 [Burkholderia cenocepacia PC184]
Length = 500
Score = 69.4 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/171 (22%), Positives = 64/171 (37%), Gaps = 23/171 (13%)
Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
A+F D N+ + + D + +L+ + ++ Y +
Sbjct: 11 AVFCDFENVALGVRDAKYEKFDIKPVLERLLLKGSIVVKKAYC--------DWDRYKGFK 62
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124
+H F+++ R+ K+S D+ L VDA + ++ VI SGD
Sbjct: 63 ASMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGDSD 115
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
F+ LV+ L+ KKV V S SD L D F+ L E R
Sbjct: 116 FSPLVSKLRENAKKVIGVGVKKS----TSDLLVANCDEFIFYDDLVREQQR 162
>gi|153004596|ref|YP_001378921.1| hypothetical protein Anae109_1734 [Anaeromyxobacter sp. Fw109-5]
gi|152028169|gb|ABS25937.1| protein of unknown function DUF88 [Anaeromyxobacter sp. Fw109-5]
Length = 249
Score = 69.4 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/168 (23%), Positives = 60/168 (35%), Gaps = 22/168 (13%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
++IALFID NL + D + L A + V+ Y D +
Sbjct: 6 SHDQRIALFIDFENLVTRTGLSAETFDLQPALDALLEKGKVVFRRAYA----DWTRFAEA 61
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIF 119
L D G ++V + K+ DV L +DA E + E ++ VI
Sbjct: 62 TQRLHDK----GVELVDVP-------PSTRAGKNGADVRLVIDALELAYLREHIDTFVIA 110
Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
SGD F L L+ + V ++ S + D F+ L
Sbjct: 111 SGDSDFCPLAYKLRENDRNV----IGMAVREATSPLFVKACDQFIYLR 154
>gi|86159239|ref|YP_466024.1| hypothetical protein Adeh_2817 [Anaeromyxobacter dehalogenans
2CP-C]
gi|85775750|gb|ABC82587.1| protein of unknown function DUF88 [Anaeromyxobacter dehalogenans
2CP-C]
Length = 253
Score = 69.4 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/170 (21%), Positives = 57/170 (33%), Gaps = 26/170 (15%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
++IALFID NL + D + L + V+ Y
Sbjct: 5 HSDQRIALFIDFENLVTRTGLSAETFDLQPALDTLLEKGKVVFRRAYA------------ 52
Query: 63 LHPLLDWLHYNGFQVVAKVA-KEFTENCGRKRV-KSSMDVELAVDAFEQS---EGLEHLV 117
DW ++ E + R K+ D+ L +DA E + E ++ V
Sbjct: 53 -----DWTRFSAATPRLHEKGVELVDVPPSTRAGKNGADMRLVIDALELAYLREHIDTFV 107
Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
I SGD F L L+ + V ++ S + D F+ L
Sbjct: 108 IASGDSDFCPLAYKLRENDRTV----IGMAVREATSPLFVKACDEFIYLR 153
>gi|107022270|ref|YP_620597.1| hypothetical protein Bcen_0714 [Burkholderia cenocepacia AU 1054]
gi|116689215|ref|YP_834838.1| hypothetical protein Bcen2424_1193 [Burkholderia cenocepacia
HI2424]
gi|105892459|gb|ABF75624.1| protein of unknown function DUF88 [Burkholderia cenocepacia AU
1054]
gi|116647304|gb|ABK07945.1| protein of unknown function DUF88 [Burkholderia cenocepacia HI2424]
Length = 498
Score = 69.0 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/171 (22%), Positives = 64/171 (37%), Gaps = 23/171 (13%)
Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
A+F D N+ + + D + +L+ + ++ Y +
Sbjct: 11 AVFCDFENVALGVRDAKYEKFDIKPVLERLLLKGSIVVKKAYC--------DWDRYKGFK 62
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124
+H F+++ R+ K+S D+ L VDA + ++ VI SGD
Sbjct: 63 ASMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGDSD 115
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
F+ LV+ L+ KKV V S SD L D F+ L E R
Sbjct: 116 FSPLVSKLRENAKKVIGVGVKKS----TSDLLVANCDEFIFYDDLVREQQR 162
>gi|254413548|ref|ZP_05027318.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
gi|196179655|gb|EDX74649.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
7420]
Length = 399
Score = 69.0 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 40/168 (23%), Positives = 66/168 (39%), Gaps = 29/168 (17%)
Query: 6 EKIALFIDGANLYASSKALGF-DIDY-RKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
EK+A+F+D NL G+ +D LL+ V+ Y GD +
Sbjct: 3 EKVAIFLDVENL------SGWLKVDGGEALLERANELGRVVVRRAY----GDFSIASVSV 52
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFS 120
L+ GF EF + K+S D+++ VD E LE +V+ +
Sbjct: 53 R--QPELNLLGF--------EFVHVYHPVKGKNSADIQIVVDVMEYLARIPDLEWVVLAT 102
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
GD F+ L L+ K V V S S+ +++ + F+ +
Sbjct: 103 GDSDFSPLFRRLRELGKSVVGV----GPRSALSEAVKKSCNRFIYIDE 146
>gi|302342036|ref|YP_003806565.1| hypothetical protein Deba_0599 [Desulfarculus baarsii DSM 2075]
gi|301638649|gb|ADK83971.1| protein of unknown function DUF88 [Desulfarculus baarsii DSM 2075]
Length = 200
Score = 69.0 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/173 (21%), Positives = 69/173 (39%), Gaps = 14/173 (8%)
Query: 3 DPREKIALFIDGANLYASSKALG-FDIDYRKLLKAFRSRAIVIRAYYY-----TTVVGDP 56
+++A+ IDG + G + + +L ++R YYY + P
Sbjct: 1 MHDKRVAVLIDGGYMDKILYEAGSMKVSFSRLANKLARGKPLLRTYYYHCLPHLSQRPTP 60
Query: 57 EQQ--FSPLHPLLDWLHYNG-FQVVA-KVAKEFTENCGRKRVK-SSMDVELAVDA--FEQ 109
E+Q ++ + L F+V +A +N G + ++ +DV LAVD
Sbjct: 61 EEQTFYANKERFFNALRRLDDFEVRLGHLAPRGWDNAGNRILEQKGVDVYLAVDVCRLSY 120
Query: 110 SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162
+ + +++ +GDG VA + KV + S + S+QL D
Sbjct: 121 TGSVSEIILVAGDGDLAPAVALAKDLGIKV-CLWFGESPSTRVSEQLWYICDQ 172
>gi|302336205|ref|YP_003801412.1| protein of unknown function DUF88 [Olsenella uli DSM 7084]
gi|301320045|gb|ADK68532.1| protein of unknown function DUF88 [Olsenella uli DSM 7084]
Length = 258
Score = 69.0 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/176 (22%), Positives = 62/176 (35%), Gaps = 36/176 (20%)
Query: 8 IALFIDGANLYASSKALGFD--------IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
+A+ ID NL + + D +++L+ + + Y
Sbjct: 9 LAVLIDYENLALGTGRRKRNGHQEPGPRPDAKRILERLVDKGRITAKRAY---------- 58
Query: 60 FSPLHPLLDW---LHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGL 113
D LH G +++ + FT K+S D+ LAVDA E + +
Sbjct: 59 -CDWQRFDDAITPLHELGIELIEIPDRAFT-------GKNSADIRLAVDAMEMCLTKDHI 110
Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
+ I SGD F+ LVA L+ K V V S L D F+ +
Sbjct: 111 DTFAILSGDSDFSPLVAKLKEFGKTVIGV----GMKESTSTLLAEVCDEFLFYEDI 162
>gi|167589253|ref|ZP_02381641.1| hypothetical protein BuboB_28211 [Burkholderia ubonensis Bu]
Length = 280
Score = 69.0 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/171 (22%), Positives = 64/171 (37%), Gaps = 23/171 (13%)
Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
A+F D N+ + + D + +L+ + ++ Y +
Sbjct: 2 AVFCDFENVALGVRDAKYEKFDIKPVLERLLLKGSIVVKKAYC--------DWDRYKGFK 53
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124
+H F+++ R+ K+S D+ L VDA + ++ VI SGD
Sbjct: 54 ASMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGDSD 106
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
F+ LV+ L+ KKV V S SD L D F+ L E R
Sbjct: 107 FSPLVSKLRENAKKVIGVGVKQS----TSDLLVANCDEFIFYDDLVREQQR 153
>gi|186475309|ref|YP_001856779.1| hypothetical protein Bphy_0541 [Burkholderia phymatum STM815]
gi|184191768|gb|ACC69733.1| protein of unknown function DUF88 [Burkholderia phymatum STM815]
Length = 440
Score = 69.0 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/171 (22%), Positives = 63/171 (36%), Gaps = 23/171 (13%)
Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
ALF D N+ + + D + +L+ + ++ Y +
Sbjct: 11 ALFCDFENVALGVRDAKYEKFDIKLVLERLLLKGSIVVKKAYC--------DWDRYKGFK 62
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124
+H F+++ R+ K+S D+ L VDA + + VI SGD
Sbjct: 63 AAMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVNTFVIISGDSD 115
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
F+ LV+ L+ K+V V S SD L D F+ L E R
Sbjct: 116 FSPLVSKLRENAKQVIGVGVQRS----TSDLLTANCDEFIFYDDLVRESQR 162
>gi|325109651|ref|YP_004270719.1| hypothetical protein Plabr_3100 [Planctomyces brasiliensis DSM
5305]
gi|324969919|gb|ADY60697.1| protein of unknown function DUF88 [Planctomyces brasiliensis DSM
5305]
Length = 441
Score = 68.2 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 32/164 (19%), Positives = 56/164 (34%), Gaps = 24/164 (14%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
+IA+F+D NL K G +L++ + Y Q
Sbjct: 2 SSENRIAIFVDTENLTGWVKQHGI----VRLIEEIGQTGHLFVRKAYGCWEQGNLQVQQQ 57
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFS 120
+ L+ GF+ + F G K+S D+ + +D E E +V+ +
Sbjct: 58 V------LNRCGFE----LVHTFHPVGG----KNSADIRITIDVMETVLCHDFETIVLAT 103
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
GD F+ L L + K + S SD + ++
Sbjct: 104 GDSDFSPLFRRLNQLGKHI----IGAGPHSPLSDSVASICQKYI 143
>gi|317407351|gb|EFV87317.1| hypothetical protein HMPREF0005_05421 [Achromobacter xylosoxidans
C54]
Length = 170
Score = 68.2 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 42/177 (23%), Positives = 65/177 (36%), Gaps = 23/177 (12%)
Query: 9 ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
ALF D N+ + + D R +L+ + ++ Y +
Sbjct: 11 ALFCDFENVALGVRDTKYQKFDIRPVLERLLLKGSIVVKKAYC--------DWERYKEFK 62
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE---QSEGLEHLVIFSGDGC 124
+H F+++ R+ K+S D+ L VDA + + VI SGD
Sbjct: 63 APMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDFCYTKSHVNTFVIISGDSD 115
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
F+ LV+ L+ KKV V S SD L D F+ L E R D +
Sbjct: 116 FSPLVSKLRENDKKVIGVGVKQS----TSDLLIANCDEFIFYDDLAREGQRAADARR 168
>gi|114778764|ref|ZP_01453574.1| hypothetical protein SPV1_03033 [Mariprofundus ferrooxydans PV-1]
gi|114551015|gb|EAU53578.1| hypothetical protein SPV1_03033 [Mariprofundus ferrooxydans PV-1]
Length = 277
Score = 68.2 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 36/172 (20%), Positives = 66/172 (38%), Gaps = 23/172 (13%)
Query: 9 ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
AL+ D N+ + + D D +++L+ + ++ Y ++
Sbjct: 11 ALYCDFENVALGVRDIKLDAFDIQRVLERLLLKGNIVVKKAYC--------DWARYKDFK 62
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124
+H F+++ R+ K+S D+ + VDA + ++ VI SGD
Sbjct: 63 APMHEAAFELIEIPHV-------RQSGKNSADIRMVVDALDLCYTKAHVDTFVIISGDSD 115
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
F+ LV+ L+ K V V S SD L D F+ L + +
Sbjct: 116 FSPLVSKLRENNKLVIGVGVKQS----TSDLLIANCDEFIYYDDLVRDSEKQ 163
>gi|149179181|ref|ZP_01857749.1| hypothetical protein PM8797T_16967 [Planctomyces maris DSM 8797]
gi|148841999|gb|EDL56394.1| hypothetical protein PM8797T_16967 [Planctomyces maris DSM 8797]
Length = 210
Score = 67.8 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 30/156 (19%), Positives = 57/156 (36%), Gaps = 18/156 (11%)
Query: 3 DPREKIALFIDGANLYASSKALGFD----IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58
+++ ++IDG NLY K G+ +D K +A VI Y+T +V P
Sbjct: 7 SKKQRTVIYIDGFNLYFGMKDNGWKRYYWLDLWKFGEAISQDREVISVKYFTAIVSKPAA 66
Query: 59 QFSPLHPLLDW---------LHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ 109
+ + + + K E + + DV +A
Sbjct: 67 KNVRQRKFISAQKTLNNPPDIIKGKYYSKTKHCLS-CEEPYERHEEKMTDVNIATHLVND 125
Query: 110 S--EGLEHLVIFSGDGCFTTLVAAL--QRKVKKVTI 141
+ + + ++ SGD +T + + Q + KKV +
Sbjct: 126 AWLDLYDVAIVVSGDSDLSTPIRTVNNQFEDKKVIV 161
>gi|257784783|ref|YP_003180000.1| hypothetical protein Apar_0980 [Atopobium parvulum DSM 20469]
gi|257473290|gb|ACV51409.1| protein of unknown function DUF88 [Atopobium parvulum DSM 20469]
Length = 260
Score = 67.8 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 44/180 (24%), Positives = 69/180 (38%), Gaps = 19/180 (10%)
Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
P+ IA+FID NL ALG ++ + + + D + +
Sbjct: 7 PQSSIAVFIDYENL-----ALGTG---KRKRNGHQEPGHLPEMKLIMERLVDKG-RITAK 57
Query: 64 HPLLDWLHY-NGFQVVAKVAKEFTENCGRKRV-KSSMDVELAVDAFEQ---SEGLEHLVI 118
DW + N + ++ E E R K+S D+ LAVDA E + ++ +
Sbjct: 58 RAYCDWQRFPNAITPLHELGIELIEIPDRAYTGKNSADIRLAVDAVEMCLTKDHIDTFAV 117
Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
SGD F+ LVA L+ K V + S L D F+ + + R PD
Sbjct: 118 LSGDSDFSPLVAKLKEAGKTV----IGVGMKESTSSLLAEVCDEFIFYEDILSS-GRIPD 172
>gi|53804338|ref|YP_114060.1| cold-shock DNA-binding domain-containing protein [Methylococcus
capsulatus str. Bath]
gi|53758099|gb|AAU92390.1| cold-shock DNA-binding domain protein [Methylococcus capsulatus
str. Bath]
Length = 305
Score = 67.8 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 28/160 (17%), Positives = 57/160 (35%), Gaps = 26/160 (16%)
Query: 7 KIALFIDG------ANLYASSKALGFDIDYRKLLKAF-----------RSRAIVIRAYYY 49
+IA+F DG +N Y + ++ L + ++ A Y+
Sbjct: 7 RIAVFYDGNYFFKVSNYYLYQHPRRARLSFKGLHEFILAEVSKNEGLDARHCQIVDAAYF 66
Query: 50 ----TTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVD 105
T + + D L + + + + + +DV LA++
Sbjct: 67 RGRLTAQQAQDQDKLFADRIFEDVLMRANITLFQRHLRTRPDGS---FEEKGIDVWLALE 123
Query: 106 AFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS 143
A+E + + V+ +GDG F LV L +V +++
Sbjct: 124 AYEMASLKKYDVCVLVAGDGDFVPLVNKLNTLGSRVMLIA 163
>gi|331700009|ref|YP_004336248.1| hypothetical protein Psed_6296 [Pseudonocardia dioxanivorans
CB1190]
gi|326954698|gb|AEA28395.1| Domain of unknown function DUF88 [Pseudonocardia dioxanivorans
CB1190]
Length = 367
Score = 67.8 bits (165), Expect = 6e-10, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 63/169 (37%), Gaps = 23/169 (13%)
Query: 1 MFDPREKIALFIDGANLYASSKA-LGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58
M E+IALF+D NL ++ LG D+ + A R V+ Y +
Sbjct: 1 MISDDERIALFLDYENLAIGAREGLGVSPFDFGPIADALAERGRVVARRAYADWSYFDDD 60
Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEH 115
+ + E + G K++ D++LAVDA E + +
Sbjct: 61 RRLLARAQV-------------ELIEIPQRLG-GSRKNAADIKLAVDAIELAYERGFVTT 106
Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
I +GD FT LV L+ K+V + S S L D F+
Sbjct: 107 FAIGTGDSDFTPLVHKLREMDKRV----IGIGVQSSTSALLPPACDEFL 151
>gi|115377562|ref|ZP_01464761.1| hypothetical protein STIAU_6634 [Stigmatella aurantiaca DW4/3-1]
gi|115365449|gb|EAU64485.1| hypothetical protein STIAU_6634 [Stigmatella aurantiaca DW4/3-1]
Length = 359
Score = 67.5 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 58/167 (34%), Gaps = 28/167 (16%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
+IALF+D NL ++ D + L + V+ Y
Sbjct: 54 RIALFLDFENLVTNTGISTAGFDLQPSLDRLLEKGKVVFRRAY-----------CDWSRF 102
Query: 67 LDW---LHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFS 120
D LH +G ++V + K+ D+ L +DA E E ++ VI S
Sbjct: 103 SDAKGRLHEHGVELVDVP-------PSTRAGKNGADMRLVIDALELCYAREHIDTFVIAS 155
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
GD F L L+ + V L+ S + D F+ L
Sbjct: 156 GDSDFCPLAYKLRENGRTV----IGLAVKESTSPLFVKACDEFLYLR 198
>gi|310821658|ref|YP_003954016.1| hypothetical protein STAUR_4409 [Stigmatella aurantiaca DW4/3-1]
gi|309394730|gb|ADO72189.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
Length = 331
Score = 67.5 bits (164), Expect = 7e-10, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 58/167 (34%), Gaps = 28/167 (16%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
+IALF+D NL ++ D + L + V+ Y
Sbjct: 26 RIALFLDFENLVTNTGISTAGFDLQPSLDRLLEKGKVVFRRAY-----------CDWSRF 74
Query: 67 LDW---LHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFS 120
D LH +G ++V + K+ D+ L +DA E E ++ VI S
Sbjct: 75 SDAKGRLHEHGVELVDVP-------PSTRAGKNGADMRLVIDALELCYAREHIDTFVIAS 127
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
GD F L L+ + V L+ S + D F+ L
Sbjct: 128 GDSDFCPLAYKLRENGRTV----IGLAVKESTSPLFVKACDEFLYLR 170
>gi|291612593|ref|YP_003522750.1| hypothetical protein Slit_0121 [Sideroxydans lithotrophicus ES-1]
gi|291582705|gb|ADE10363.1| protein of unknown function DUF88 [Sideroxydans lithotrophicus
ES-1]
Length = 274
Score = 67.5 bits (164), Expect = 9e-10, Method: Composition-based stats.
Identities = 35/165 (21%), Positives = 61/165 (36%), Gaps = 23/165 (13%)
Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
ALF D N+ + + D +K+L+ + ++ Y +
Sbjct: 11 ALFCDFENVALGVRDAKYAQFDIKKVLERLLLKGSIVVKKAYC--------DWDRYKEFK 62
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124
+H F+++ R+ K+S D+ + VDA + ++ VI SGD
Sbjct: 63 ATMHEAAFELIEIPHV-------RQSGKNSADIRMVVDALDLCYTKAHVDTFVIISGDSD 115
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
F+ LV+ L+ K V + SD L D F+ L
Sbjct: 116 FSPLVSKLRENNKYV----IGIGVKDSTSDLLSANCDEFIFYDDL 156
>gi|18977686|ref|NP_579043.1| hypothetical protein PF1314 [Pyrococcus furiosus DSM 3638]
gi|18893418|gb|AAL81438.1| hypothetical protein PF1314 [Pyrococcus furiosus DSM 3638]
Length = 185
Score = 67.1 bits (163), Expect = 9e-10, Method: Composition-based stats.
Identities = 37/152 (24%), Positives = 53/152 (34%), Gaps = 21/152 (13%)
Query: 7 KIALFIDGANLYASSK-------ALGFDIDYRKLLKAFRS-RAIVIRAYYYTTVVGDPEQ 58
K A+ IDG N+ K L DID+RK + +S V A Y
Sbjct: 2 KAAVLIDGENVVMCLKNALGGKVQLDRDIDWRKFFEYLKSLGYEVTIARIYA-----NPF 56
Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEH 115
F + + L G +VV KS+ D + VD ++
Sbjct: 57 IFLKNPHIANNLEKMGIKVVLAE-----STMKENGPKSTTDATMIVDGMSILYERPAIDA 111
Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLS 147
L+I SGD F L + + V V+ S
Sbjct: 112 LIIVSGDRDFLPLAEKARELGRTVLFVAFPDS 143
>gi|188586884|ref|YP_001918429.1| protein of unknown function DUF88 [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179351571|gb|ACB85841.1| protein of unknown function DUF88 [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 188
Score = 66.7 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/188 (18%), Positives = 69/188 (36%), Gaps = 20/188 (10%)
Query: 1 MFDPREKIALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIV--IRAYYY-------T 50
M + R+ + +FIDG L LG IDY +L + ++ +R YYY
Sbjct: 1 MRNYRQSLNIFIDGGFLEKVFAKLGEPKIDYLRLYSWISRQVMIPRLRTYYYHCLPYQGN 60
Query: 51 TVVGDPEQQFSPLHPLLDWLHYNG---FQVVAKVAKEFTENCGRKRVKSSMDVELAVDAF 107
+ +FS + + ++ + + +E + +DV +A+D
Sbjct: 61 PPSQGEKDRFSKKQRFFNKISSLPRSEVRLGSLAFRGRSEEKQPIFEQKKVDVLMALDIA 120
Query: 108 EQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165
+ + + H+ + S D F + + K V ++ + P L D +
Sbjct: 121 RSAFEQRISHIALISSDSDFVPAIQMAKDKGIIVYLLYSHEIKPH---HDLVDACDEVIY 177
Query: 166 L--AYLKN 171
L +K
Sbjct: 178 LTMDDIKE 185
>gi|51891180|ref|YP_073871.1| hypothetical protein STH42 [Symbiobacterium thermophilum IAM 14863]
gi|51854869|dbj|BAD39027.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM
14863]
Length = 264
Score = 66.7 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/172 (18%), Positives = 65/172 (37%), Gaps = 23/172 (13%)
Query: 7 KIALFIDGANLYASSKA-LGFDIDYRKLLKAFRS-----RAIVIRAYYYTTVVGDPEQQF 60
+ +F+D N+Y S K G D +L+ + R V + Y +
Sbjct: 2 RSVIFMDYENIYWSMKQQYGVAPDLDRLITSLREMGERGNGQVCLMHAYADFDHEE---- 57
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLV 117
L+ L + F++N K++ D+E+++DA E ++ V
Sbjct: 58 --FRGLMSDLQRRSVE----PRHVFSKNYEDGTRKNAADIEMSLDALEIMYTRSDIDTFV 111
Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
+ GD ++ L+ + K+V +V+ + S + + F + L
Sbjct: 112 LVCGDRDMIQVIRKLRARGKQVHVVAVEKTM----SKDVMSFVNQFTTIEAL 159
>gi|169825423|ref|YP_001695598.1| hypothetical protein Bsph_p009 [Lysinibacillus sphaericus C3-41]
gi|168994700|gb|ACA42239.1| conserved hypothetical protein [Lysinibacillus sphaericus C3-41]
Length = 181
Score = 66.3 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/173 (16%), Positives = 67/173 (38%), Gaps = 14/173 (8%)
Query: 5 REKIALFIDGANLYASSKALGFD-ID----YRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
+K A+ +D N+ + LG + + + L+ + ++A+Y V + +
Sbjct: 1 MKKTAILVDEMNVIQQLRRLGIHGFNPWNAFYQALQRWNGDKKGVKAFYCANVPKEDAEH 60
Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG-LEHLVI 118
+ + L + +V ++ R+ K +DV LA+D E + ++ + I
Sbjct: 61 EKR-NNFFEGLINHNIKVSVGTV--VYDSNSRRIAKG-VDVALALDIVEHARSGVQDIFI 116
Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
+GD + Q +V +V ++ + + AD + L +
Sbjct: 117 CTGDADVVPAIIRAQELGSRVHVV----VSRAIPAKNITLAADSVVRLEDILE 165
>gi|149922564|ref|ZP_01910994.1| hypothetical protein PPSIR1_41429 [Plesiocystis pacifica SIR-1]
gi|149816591|gb|EDM76086.1| hypothetical protein PPSIR1_41429 [Plesiocystis pacifica SIR-1]
Length = 264
Score = 66.3 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 42/175 (24%), Positives = 64/175 (36%), Gaps = 27/175 (15%)
Query: 8 IALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
IA++ D N+ + G+D D +L+ R V+ Y
Sbjct: 11 IAVYADYENVALGAIEAGYDAFDIALVLERLLERGNVVVRKAYC---------------- 54
Query: 67 LDWLHYNGFQVVAKVAK-EFTENCGRK-RVKSSMDVELAVDAFEQSE---GLEHLVIFSG 121
DW+ Y G + E E K K+S D+ L VDA + + + + +G
Sbjct: 55 -DWVRYKGERKRLHERSFELVEVPHVKLSGKNSADIRLVVDALDLAHTKAHVGVFALLTG 113
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
D F+ LV+ L+ K V V S S L D F+ L + RD
Sbjct: 114 DSDFSPLVSKLRENGKWVVGVGVRQS----TSKLLVEICDEFIYYDDLVRDKRRD 164
>gi|319791587|ref|YP_004153227.1| hypothetical protein Varpa_0898 [Variovorax paradoxus EPS]
gi|315594050|gb|ADU35116.1| protein of unknown function DUF88 [Variovorax paradoxus EPS]
Length = 279
Score = 66.3 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 95 KSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMA 152
K+S D+ LAVDA + +E + +V+ S D F LV+ L+ K +V +
Sbjct: 78 KNSTDIALAVDAIDLVIAERPDVVVLVSSDSDFAPLVSRLREKGCRVC----GIGQQGKT 133
Query: 153 SDQLRRQADYFMDLAY 168
D+ D F+DLA+
Sbjct: 134 GDETVGIYDTFIDLAH 149
>gi|150402231|ref|YP_001329525.1| hypothetical protein MmarC7_0304 [Methanococcus maripaludis C7]
gi|150033261|gb|ABR65374.1| protein of unknown function DUF88 [Methanococcus maripaludis C7]
Length = 215
Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/181 (19%), Positives = 64/181 (35%), Gaps = 36/181 (19%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
K+AL IDG N+ F++D K+ A ++ Y
Sbjct: 20 TNKMALLIDGPNM----LRKEFNVDLDKVRDALEQFGDIVVGRVYLNQYASD-------- 67
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGD 122
L++ + GF+ +DVE+AVD E + L+ LV + D
Sbjct: 68 KLIEAIANQGFEPRI--------------SAGDVDVEMAVDGTELIFNKNLDTLVYMTRD 113
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM----DLAYLKNEIARDPD 178
F + + + K++ +V S ++ AD+ + D K ++ +
Sbjct: 114 ADFLPAIRKAKERGKQIIVVGAEPGF----STAIQNIADHVIRVEEDFELDKEKLEQKKR 169
Query: 179 E 179
E
Sbjct: 170 E 170
>gi|158336589|ref|YP_001517763.1| hypothetical protein AM1_3453 [Acaryochloris marina MBIC11017]
gi|158306830|gb|ABW28447.1| conserved domain protein [Acaryochloris marina MBIC11017]
Length = 459
Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/166 (24%), Positives = 72/166 (43%), Gaps = 27/166 (16%)
Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
+A+F D N+ +++ + + L++ +S+ Y+ + E L+
Sbjct: 95 VAVFWDYENVKIAAQGIQAPL-AESLVEYSQSQGHTRLKIVYSNWRREKE-------SLV 146
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSS-MDVELAVDAFEQS---EGLEHLVIFSGDG 123
L+ GF+ + K + +DV+L VD + + H +I +GD
Sbjct: 147 QALYSLGFEPI-----------HVSTGKENAVDVKLTVDCLNTAYQYPDVGHFIIVTGDR 195
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
F LV AL+ K+VT++ +AS+QL AD F+DL L
Sbjct: 196 DFVPLVNALKTLEKQVTLI----GRAEVASNQLLLSADEFIDLEKL 237
>gi|256394876|ref|YP_003116440.1| hypothetical protein Caci_5741 [Catenulispora acidiphila DSM 44928]
gi|256361102|gb|ACU74599.1| protein of unknown function DUF88 [Catenulispora acidiphila DSM
44928]
Length = 435
Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/180 (19%), Positives = 64/180 (35%), Gaps = 26/180 (14%)
Query: 5 REKIALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI------VIRAYYYT 50
++ A+ +D + A++ + G ++DY L+ A RA V+R Y+Y
Sbjct: 1 MDRCAVLVDAGYVLAAAANVVSGDPGRPGIEVDYPGLVTALTERAAAETGLPVLRVYWYD 60
Query: 51 TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110
+ L +LD L ++ K + G+ K +D L D +
Sbjct: 61 AAPATGPTRDQRLLRVLDGL-------KLRLGKLVRRDDGKFEQKG-VDTFLHADLTGLA 112
Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
+ +V+ SGD V Q ++ + S +L D M L+
Sbjct: 113 RKRAVADVVLVSGDEDLLHAVEEAQEYGTRIHLWGAASDYNQ--SLELIAAVDKSMTLSE 170
>gi|326317506|ref|YP_004235178.1| hypothetical protein Acav_2702 [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323374342|gb|ADX46611.1| Domain of unknown function DUF88 [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 179
Score = 65.9 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/178 (19%), Positives = 69/178 (38%), Gaps = 19/178 (10%)
Query: 12 IDGANLYASSKALGFDIDYRKLLKAFR--SRAIVIRAYYYTTVVGDPEQQFSPLHPLLDW 69
+DGA L+ K+ DY KL + + +YY +V + H +
Sbjct: 7 VDGAYLFNYGKS--RPFDYLKLKNEITRLNGGPIRESYYLNSVSDPATDAQNAFHSWIKT 64
Query: 70 LHYNG--FQVVAKVAKEFT------ENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIF 119
+G F+V K + + V+ +DV +A + + + L++
Sbjct: 65 APPHGPKFRVQLYKLKRMHMSCAACGHSSDRWVQKGVDVGIATLIIKLAAQNVYDRLILS 124
Query: 120 SGDGCFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
+GDG F ++ ++ + K+V + + S S L+ +D + + + I R
Sbjct: 125 AGDGDFEDAISYVKSELHKEVWVSGSAASL----SPDLQSYSDNVLWMEDMSPTIDRT 178
>gi|121596271|ref|YP_988167.1| hypothetical protein Ajs_3985 [Acidovorax sp. JS42]
gi|120608351|gb|ABM44091.1| protein of unknown function DUF88 [Acidovorax sp. JS42]
Length = 179
Score = 65.9 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/157 (16%), Positives = 57/157 (36%), Gaps = 23/157 (14%)
Query: 24 LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAK 83
+ ID+ KL + +++ G + L NGF+V+
Sbjct: 41 YNWKIDFGKLFQFAGGDRNLVK------KAGLFGSRPPKNDSLWTAAEKNGFEVIV---- 90
Query: 84 EFTENCGRKRVKSSMDVELAVDAFEQSEGL-----EHLVIFSGDGCFTTLVAALQRKVKK 138
+ K +D ++ E S + + + + SGD + + L+++
Sbjct: 91 --YDRNIAGHEKK-IDTDIVATMIEDSYEILTIGQDEITLVSGDSDYVPAIEKLKKRGIP 147
Query: 139 VTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
V +V A+ +L+ A F++L + +A+
Sbjct: 148 VHVV-----FWGHAARELKEVATKFVNLDPYLDHLAK 179
>gi|120611183|ref|YP_970861.1| hypothetical protein Aave_2514 [Acidovorax citrulli AAC00-1]
gi|120589647|gb|ABM33087.1| protein of unknown function DUF88 [Acidovorax citrulli AAC00-1]
Length = 179
Score = 65.5 bits (159), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/177 (20%), Positives = 70/177 (39%), Gaps = 19/177 (10%)
Query: 12 IDGANLYASSKALGFDIDYRKLLKAFR--SRAIVIRAYYYTTVVGDPEQQFSPLHPLLDW 69
IDGA L+ K+ DY KL + + +YY +V + H +
Sbjct: 7 IDGAYLFNYGKS--KPFDYLKLKNEITRLNGGPIRESYYLNSVSDPATDAQNAFHSWIKT 64
Query: 70 LHYNG--FQVVAKVAKEFTEN------CGRKRVKSSMDVELAVDAFEQSEG--LEHLVIF 119
+G F+V K+ N + V+ +DV +A + + + L++
Sbjct: 65 APPHGPKFRVQLYKLKKMHMNCAACGHSSDRWVQKGVDVGIATLIIKLAAQNVYDRLILS 124
Query: 120 SGDGCFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
+GDG F ++ ++ + K+V + + S S L+ +D + + + I R
Sbjct: 125 AGDGDFEDAISYVKSELHKEVWVSGSAASL----SPDLQSYSDNVLWMEDMSPTIDR 177
>gi|220907876|ref|YP_002483187.1| hypothetical protein Cyan7425_2469 [Cyanothece sp. PCC 7425]
gi|219864487|gb|ACL44826.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7425]
Length = 629
Score = 64.8 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 42/189 (22%), Positives = 70/189 (37%), Gaps = 41/189 (21%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
K A+F D NL + F ++LL++ ++ T QF+
Sbjct: 29 KSAIFYDIENL---LRGYNFS---QELLESLS-----LKEIANTIRKTGKIDQFAVQKAY 77
Query: 67 LDWLHYNGFQVVAKVAKEFTENCG----------RKRVKSSMDVELAVDAFEQS---EGL 113
+W K + G R+R K++ D++L +DA + +
Sbjct: 78 ANWSDP-----RLKTMRVEINELGIDPIQVFGFSRERTKNAADIQLVIDAINLANLRPSI 132
Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
+ VI SGDG F +L L KKV + S AS + D F+++
Sbjct: 133 DTFVIVSGDGGFASLAKYLHECGKKV----ICCAYKSSASKTFQSVCDGFVEIVE----- 183
Query: 174 ARDPDEDKK 182
PD D++
Sbjct: 184 ---PDVDRR 189
>gi|330509013|ref|YP_004385441.1| hypothetical protein MCON_3373 [Methanosaeta concilii GP-6]
gi|328929821|gb|AEB69623.1| conserved hypothetical protein [Methanosaeta concilii GP-6]
Length = 184
Score = 64.8 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 41/186 (22%), Positives = 68/186 (36%), Gaps = 27/186 (14%)
Query: 6 EKIALFIDGANLYASSKALGFDI-----DYRKLLKAFRSRAIVIRAYYYT-------TVV 53
++ A+FIDGA L +K L D D + +R YYY
Sbjct: 10 DRAAVFIDGAYL---TKILDVDFGKPKIDLARFSDILCGNYERLRTYYYNCMPYQSCPST 66
Query: 54 GDPEQQFSPLHPLLDWLHYNG-FQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS-- 110
+ ++F+ + + L F+V G + V+ +D+ LA D S
Sbjct: 67 DEESRRFASMDKFVYTLRKLPRFEVKL----GRLGRVGGEFVQKRVDIALAADLVRLSCG 122
Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA-YL 169
+ VI +GD F + A + VT+ + S D+L D + L
Sbjct: 123 RMIGKAVIVTGDSDFLPAIEAAKDAGVLVTLFYSESSIH----DELLSAVDERTPIDQDL 178
Query: 170 KNEIAR 175
+ +AR
Sbjct: 179 IDLVAR 184
>gi|221195605|ref|ZP_03568659.1| conserved hypothetical protein [Atopobium rimae ATCC 49626]
gi|221184371|gb|EEE16764.1| conserved hypothetical protein [Atopobium rimae ATCC 49626]
Length = 256
Score = 64.4 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 38/169 (22%), Positives = 63/169 (37%), Gaps = 24/169 (14%)
Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
P+ IA+FID N + G + + + + + Y +S
Sbjct: 7 PQSSIAVFIDYEN--FPVGSNGSRGALKLVFERLVDKGRITIKRAYC--------DWSRH 56
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE---QSEGLEHLVIFS 120
+ LH G + E +N ++ K+S D+ LAVDA E + ++ I S
Sbjct: 57 EAVKPALHELGVE-----LIEIPDNS--QKGKNSADIHLAVDALEACLTKDHIDTFAILS 109
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
GD F+ LVA L+ K V + + L D F+ +
Sbjct: 110 GDSDFSPLVAKLKEYDKTVIGIGRKKG----TASLLENVCDEFIFYEDI 154
>gi|74317958|ref|YP_315698.1| hypothetical protein Tbd_1940 [Thiobacillus denitrificans ATCC
25259]
gi|74057453|gb|AAZ97893.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC
25259]
Length = 308
Score = 64.4 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 38/178 (21%), Positives = 64/178 (35%), Gaps = 23/178 (12%)
Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
A+F D N+ K + D R +L+ + ++ Y +
Sbjct: 10 AVFCDFENVAIGLKEGNYPDFKIRPVLERLLLKGSIVVKKAYC--------DWDRYKEYK 61
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGC 124
+H F+++ R+ K+S D+ + VDA + ++ VI SGD
Sbjct: 62 RDMHEAAFELIEIPHV-------RQSGKNSADIRMVVDALDLCYTKAHIDAFVIISGDSD 114
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182
F+ L++ L+ K V + AS L D F+ L AR KK
Sbjct: 115 FSPLISKLKENGKSV----IGIGVRGSASSLLISNCDEFIFYEDLVQPKARPTRPAKK 168
>gi|121583279|ref|YP_973715.1| hypothetical protein Pnap_4909 [Polaromonas naphthalenivorans CJ2]
gi|120596537|gb|ABM39973.1| protein of unknown function DUF88 [Polaromonas naphthalenivorans
CJ2]
Length = 279
Score = 64.4 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 27/166 (16%), Positives = 50/166 (30%), Gaps = 40/166 (24%)
Query: 7 KIALFIDGAN-----LYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
++A+ +D N L + L+ V+ + +
Sbjct: 11 RVAVLVDCDNVTPEILEYA-------------LRVIAQFGRVV-------LRRGYGNHTT 50
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIF 119
+ + L F ++ G+ D+ LA+DA E + +
Sbjct: 51 LANKWQEALVRLAFT----PCLQYQYASGKNTA----DIALALDALEAMFDNRADTFCLV 102
Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165
+ D F L L+ + V IV D LR +D F +
Sbjct: 103 TSDSDFAYLCRKLRERGATVCIVGEAK-----TPDALRNASDQFFE 143
>gi|159905990|ref|YP_001549652.1| hypothetical protein MmarC6_1608 [Methanococcus maripaludis C6]
gi|159887483|gb|ABX02420.1| protein of unknown function DUF88 [Methanococcus maripaludis C6]
Length = 215
Score = 64.4 bits (156), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/162 (19%), Positives = 58/162 (35%), Gaps = 32/162 (19%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
K+AL IDG N+ F++D K+ A ++ Y
Sbjct: 20 TNKMALLIDGPNM----LRKEFNVDLDKVRDALEQFGDIVVGRVYLNQYASD-------- 67
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGD 122
L++ + GF+ +DVE+AVD E + L+ LV + D
Sbjct: 68 KLIEAIANQGFEPRI--------------SAGDVDVEMAVDGTELIFNKNLDTLVYMTRD 113
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F + + + K++ +V S ++ AD+ +
Sbjct: 114 ADFLPAIRKAKERGKQIIVVGAEPGF----STAIQNIADHVI 151
>gi|150378220|ref|YP_001314815.1| hypothetical protein Smed_6284 [Sinorhizobium medicae WSM419]
gi|150032767|gb|ABR64882.1| conserved hypothetical protein [Sinorhizobium medicae WSM419]
Length = 48
Score = 64.4 bits (156), Expect = 7e-09, Method: Composition-based stats.
Identities = 32/43 (74%), Positives = 37/43 (86%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIV 43
MFD REKIAL IDGANL+A+SKALGF+ID+ KLL AFR RA +
Sbjct: 1 MFDQREKIALLIDGANLHAASKALGFEIDFCKLLSAFRRRASL 43
>gi|187735246|ref|YP_001877358.1| protein of unknown function DUF88 [Akkermansia muciniphila ATCC
BAA-835]
gi|187425298|gb|ACD04577.1| protein of unknown function DUF88 [Akkermansia muciniphila ATCC
BAA-835]
Length = 251
Score = 64.0 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 36/165 (21%), Positives = 60/165 (36%), Gaps = 30/165 (18%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
+I + ID N + + KL++ +R ++ Y + + + S
Sbjct: 5 RIVVLIDADNTNLA--------NLEKLIQYISTRGRIVVKRAYGNWSENLKDKKS----- 51
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA--FEQSEGLEHLVIFSGDGC 124
L +GF K F G+ D+ LA+DA + VI S D
Sbjct: 52 --ALQQSGF----KTEHYFNCVPGKNAT----DIALAIDAVDLLHKNSYDSFVIVSSDSD 101
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
FT L L+ V ++ S+ AS+ R D F D+ +
Sbjct: 102 FTPLSIYLKESG--VYVIGFGKSN---ASEAFRNGCDEFKDIEKI 141
>gi|150399127|ref|YP_001322894.1| hypothetical protein Mevan_0373 [Methanococcus vannielii SB]
gi|150011830|gb|ABR54282.1| protein of unknown function DUF88 [Methanococcus vannielii SB]
Length = 215
Score = 64.0 bits (155), Expect = 8e-09, Method: Composition-based stats.
Identities = 30/162 (18%), Positives = 58/162 (35%), Gaps = 32/162 (19%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
K+AL IDG N+ F++D K+ A ++ Y
Sbjct: 20 TNKMALLIDGPNM----LRKEFNVDLDKVRDALDEFGDIVVGRVYLNQYASD-------- 67
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGD 122
L++ + GF+ +DVE+AVD E + ++ +V + D
Sbjct: 68 KLIEAIANQGFEPRI--------------SAGDVDVEMAVDGTELIFNKNIDTIVYMTRD 113
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F + + + K++ +V S ++ AD+ +
Sbjct: 114 ADFLPAIRKAKERGKQIIVVGAEPGF----STAIQNIADHVI 151
>gi|75909290|ref|YP_323586.1| hypothetical protein Ava_3082 [Anabaena variabilis ATCC 29413]
gi|75703015|gb|ABA22691.1| Protein of unknown function DUF88 [Anabaena variabilis ATCC 29413]
Length = 261
Score = 63.6 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/149 (24%), Positives = 63/149 (42%), Gaps = 24/149 (16%)
Query: 31 RKLLKAFRSRAIVIRAY-YYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC 89
+ LL+ S+ +I YY + + L L +N V
Sbjct: 36 KLLLEFATSKGRLIHKNVYYNSKFKNQADAKRN----LANLSFNWIDV------------ 79
Query: 90 GRKRVKSSMDVELAVDAFEQSEGL--EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLS 147
+K+S D +L VD + + L + +I SGDG FTTL+ LQ+ K+V +++ +
Sbjct: 80 -PCLLKNSADNQLIVDCLQVNNNLSPDIFIIVSGDGDFTTLINPLQKLGKQVIVIAEAGN 138
Query: 148 DPSMASDQLRRQADYFMDLAYLKNEIARD 176
+L+ AD F + L +I ++
Sbjct: 139 VK----QKLKELADEFYFIEELSQKIQQE 163
>gi|219850648|ref|YP_002465081.1| hypothetical protein Cagg_3809 [Chloroflexus aggregans DSM 9485]
gi|219544907|gb|ACL26645.1| protein of unknown function DUF88 [Chloroflexus aggregans DSM 9485]
Length = 319
Score = 63.2 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/195 (20%), Positives = 73/195 (37%), Gaps = 33/195 (16%)
Query: 4 PREKI------ALFIDGANLYASSKALGF------DIDYRKLLKAFRSRAIVIRAYYYTT 51
P E+ A+F D NL K GF ++ +++L A R +
Sbjct: 14 PMERTPMPFNTAIFYDIENL---IKGYGFSTQTITNVSLKEILTALRQTGKIGHIAVQRA 70
Query: 52 VVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS- 110
+ + + ++ L + QV R+ +++ DV+LA+DA + +
Sbjct: 71 YANWSDPRLGVMRDEINELGIDPIQVF---------GFAREPKRNAADVQLAIDAIDLAY 121
Query: 111 --EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
GL+ VI SGDG F L L K V + S + + D F+ +
Sbjct: 122 IRPGLDVFVIVSGDGGFAALAKKLHEYGKTV----IGCAYRSAVNKTFQAVCDEFVWITD 177
Query: 169 LKNEIA--RDPDEDK 181
+ ++ P + +
Sbjct: 178 TEEKVQPAHTPGQIR 192
>gi|294339327|emb|CAZ87683.1| conserved hypothetical protein [Thiomonas sp. 3As]
Length = 268
Score = 62.8 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/170 (17%), Positives = 53/170 (31%), Gaps = 40/170 (23%)
Query: 3 DPREKIALFIDGAN-----LYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
D ++A+ +D N L + L+ V+ +
Sbjct: 20 DHESRVAVLVDCDNTTPEILEYA-------------LRVVAQFGRVV-------LRRGYG 59
Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEH 115
+ + + L F +F G+ D+ LA+DA E + +
Sbjct: 60 NHATLANKWQEALVRLAFT----PCLQFQYAAGKNTS----DIALALDAVEALFDKRADT 111
Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165
+ + D F L L+ + V IV S D LR +D F +
Sbjct: 112 FCLVTSDSDFAYLCRKLRERGATVHIVGEAKSP-----DALRNASDQFFE 156
>gi|192362254|ref|YP_001981906.1| hypothetical protein CJA_1417 [Cellvibrio japonicus Ueda107]
gi|190688419|gb|ACE86097.1| conserved hypothetical protein [Cellvibrio japonicus Ueda107]
Length = 178
Score = 62.8 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/155 (17%), Positives = 57/155 (36%), Gaps = 24/155 (15%)
Query: 26 FDIDYRKLLKAFRSR-AIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKE 84
+ +D+ KL + A V +A + + + + NGF+V
Sbjct: 43 WKLDFGKLFQFAGGEKAEVRKAALFGSRPPKNDSLWVAAQK-------NGFEVTT----- 90
Query: 85 FTENCGRKRVKSSMDVELAVDAFEQSEGL----EHLVIFSGDGCFTTLVAALQRKVKKVT 140
+ N K +D ++ E S + + + + SGD + + L+++ V
Sbjct: 91 YDRNVANAEKK--IDTDIVATMIEDSYEILQPGDEVTLVSGDSDYVPAIEKLKKRGIAVH 148
Query: 141 IVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
+V A+ +L+ A F +L + + R
Sbjct: 149 VV-----FWKHAARELKEAASTFTELDPYLDHLKR 178
>gi|148359486|ref|YP_001250693.1| hypothetical protein LPC_1394 [Legionella pneumophila str. Corby]
gi|148281259|gb|ABQ55347.1| hypothetical protein LPC_1394 [Legionella pneumophila str. Corby]
Length = 211
Score = 62.8 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/185 (19%), Positives = 66/185 (35%), Gaps = 25/185 (13%)
Query: 3 DPREKIALFIDGANLYASSK---ALGFDIDYRKL-LKAFRSRAIVIRAYYYTT-VVGDPE 57
++ ++IDG NLY + + +D + L + S + + YYT +
Sbjct: 1 MNNKRTTIYIDGFNLYYGCLKRTSYKW-LDLKALFINLLESSHNIQKIKYYTAPISSRDG 59
Query: 58 QQFSPLHP--LLDWL------------HYNGFQVVAKVAKEFTENCGRKRV-KSSMDVEL 102
+ S L L HY +V AKV + + + DV L
Sbjct: 60 NEASRFRQKYYLQALESYIPEIEIYYGHYLTHEVSAKVVNPPPDFIKIYKTEEKGSDVNL 119
Query: 103 AVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKK-VTIVSTVLSDPSMASDQLRRQ 159
A+ + + + VI S D + ++ + K + +V S +L +
Sbjct: 120 ALHVLNDAWLDAYDCAVIVSNDSDLAESLRLVKSQTNKLIGVVFPNTDHKRRPSRELAKY 179
Query: 160 ADYFM 164
AD F+
Sbjct: 180 AD-FI 183
>gi|150021343|ref|YP_001306697.1| hypothetical protein Tmel_1465 [Thermosipho melanesiensis BI429]
gi|149793864|gb|ABR31312.1| protein of unknown function DUF88 [Thermosipho melanesiensis BI429]
Length = 188
Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/178 (15%), Positives = 66/178 (37%), Gaps = 19/178 (10%)
Query: 7 KIALFIDGANLYASS-----KALGFDIDYRKLLKAFRS----RAIVIRAYYYTTVV--GD 55
+ + +DG LY S KA +D ++ ++K + +IR ++ + G
Sbjct: 2 RAIIIVDGNYLYKSCMNEWKKAPKYDFCFQNIIKFYSKVINTEMHLIRVRFHDSPPCEGG 61
Query: 56 PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEH 115
+ +L+ L V G + +DV +A+D + ++
Sbjct: 62 DNNFRTKKEKVLNKLRSIQ---RIDVVLGRCRKIGNTFSQKGVDVNMALDIVRYANDIDT 118
Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM-ASDQ----LRRQADYFMDLAY 168
++I SGD + + ++ ++ + S ++D+ L +D++
Sbjct: 119 IIIISGDSDLVPAFDEARNRGAEIVLLLSPHHFNSTGSADESIKKLIVASDFYFTFDD 176
>gi|239813866|ref|YP_002942776.1| hypothetical protein Vapar_0857 [Variovorax paradoxus S110]
gi|239800443|gb|ACS17510.1| protein of unknown function DUF88 [Variovorax paradoxus S110]
Length = 275
Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Query: 95 KSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMA 152
K+S D+ LAVDA + +E + +V+ S D F LV L+ K +V L
Sbjct: 69 KNSTDIALAVDALDLVIAERPDVVVLVSSDSDFAPLVIRLREKGCRVC----GLGQQGKT 124
Query: 153 SDQLRRQADYFMDLAY 168
++ D F DL +
Sbjct: 125 GEETVAVYDEFTDLQH 140
>gi|45358613|ref|NP_988170.1| hypothetical protein MMP1050 [Methanococcus maripaludis S2]
gi|44921371|emb|CAF30606.1| conserved hypothetical protein [Methanococcus maripaludis S2]
Length = 215
Score = 61.7 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/160 (18%), Positives = 58/160 (36%), Gaps = 32/160 (20%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
K+AL IDG N+ F++D K+ A ++ Y L
Sbjct: 22 KMALLIDGPNM----LRKEFNVDLDKVRDALEQFGDIVVGRVYLNQYASD--------KL 69
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124
++ + GF+ +DVE+AV+ E + ++ +V + D
Sbjct: 70 IEAIANQGFEPRI--------------SAGDVDVEMAVEGTELIFNKNIDTIVYMTRDAD 115
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F + + + K++ +V S ++ AD+ +
Sbjct: 116 FLPAIRKAKERGKQIIVVGAEPGF----STAIQNIADHVI 151
>gi|313681102|ref|YP_004058841.1| hypothetical protein Ocepr_2220 [Oceanithermus profundus DSM 14977]
gi|313153817|gb|ADR37668.1| hypothetical protein Ocepr_2220 [Oceanithermus profundus DSM 14977]
Length = 242
Score = 61.7 bits (149), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/189 (17%), Positives = 61/189 (32%), Gaps = 28/189 (14%)
Query: 7 KIALFIDGANLYASSKA---LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGD---PEQQF 60
++ +++DG N Y + + +++ KL K + ++ Y+T V + Q
Sbjct: 30 RLIVYVDGFNFYYGAVKQTPYKW-LNFNKLFKILFPKDDLVLVRYFTARVKNNPLNPGQR 88
Query: 61 SPLHPLLDWLH-------YNGF---QVVAKVAKEFTENCGR--KRVKSSMDVELAVDAFE 108
L L + GF V R K + DV LA
Sbjct: 89 ERQGTYLRALRTLPDFEIHEGFFLSHPVNMPVAPPGTGFARVLKFEEKGSDVNLATYLML 148
Query: 109 QS--EGLEHLVIFSGDGCFTTLVAALQRK-VKKVTIVST------VLSDPSMASDQLRRQ 159
+ + + V+ S D + + + K V +V S LR+
Sbjct: 149 DAIEDRFDTAVVVSHDSDLALPIQIVNERLGKPVGVVGYDPRFQRKYGKRPRTSKSLRKV 208
Query: 160 ADYFMDLAY 168
A ++ L
Sbjct: 209 AAFYKTLRE 217
>gi|330503755|ref|YP_004380624.1| hypothetical protein MDS_2841 [Pseudomonas mendocina NK-01]
gi|328918041|gb|AEB58872.1| hypothetical protein MDS_2841 [Pseudomonas mendocina NK-01]
Length = 239
Score = 61.3 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 9/81 (11%)
Query: 99 DVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
D+ LA+DA E + + + D F L L+ + V IV D L
Sbjct: 49 DIALALDAMEALFDHRADTFCLVTSDSDFAYLCRKLRERGATVCIVG-----EPKTPDAL 103
Query: 157 RRQADYFMDLAYLKNEIARDP 177
R +D F + + + E ++P
Sbjct: 104 RNASDQFFE--WRREEHFQEP 122
>gi|154250322|ref|YP_001411147.1| hypothetical protein Fnod_1655 [Fervidobacterium nodosum Rt17-B1]
gi|154154258|gb|ABS61490.1| protein of unknown function DUF88 [Fervidobacterium nodosum
Rt17-B1]
Length = 432
Score = 61.3 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 32/161 (19%), Positives = 58/161 (36%), Gaps = 37/161 (22%)
Query: 12 IDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLH 71
+D +Y ++ G ++ Y + + + L+
Sbjct: 22 VDVQLVYNEAQKYGR----------------IVGGKAYGSWSK------HKMPSFV--LY 57
Query: 72 YNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG---LEHLVIFSGDGCFTTL 128
G +++ EF N K + D+ LAVD E + ++ + +GD FT L
Sbjct: 58 NYGIELIEIPEAEFLPN-----KKGN-DIRLAVDCVEIALHNNVIDTFFLVTGDADFTAL 111
Query: 129 VAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
V L+ KKV ++ S AS +L D F+ +
Sbjct: 112 VYKLKSYGKKVIALARTKS----ASYELVSAVDLFIPYEDI 148
>gi|266624411|ref|ZP_06117346.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479]
gi|288863732|gb|EFC96030.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479]
Length = 259
Score = 61.3 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 57/146 (39%), Gaps = 24/146 (16%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYR-------KLLKAFRSRAIVIRAYYYTTVVGDPEQ 58
E + +F+D N+Y S K G ++ L++ S + Y D +Q
Sbjct: 18 ENVGIFVDFDNIYYSLKEYG--VNPESPEYCVFSLMERIYSINKIRTLRAYA----DYDQ 71
Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEH 115
L L ++ ++ + + K++ D+EL+VDA E S ++
Sbjct: 72 VGVSLKHLQ--------EMRVQIKNVYGNGLEEEYRKNASDIELSVDALEIYYRSPEIDT 123
Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTI 141
V + D +++ L K K + +
Sbjct: 124 FVFLTSDSDMIPIMSRLTYKGKHIHL 149
>gi|91776174|ref|YP_545930.1| hypothetical protein Mfla_1822 [Methylobacillus flagellatus KT]
gi|91710161|gb|ABE50089.1| protein of unknown function DUF88 [Methylobacillus flagellatus KT]
Length = 275
Score = 61.3 bits (148), Expect = 6e-08, Method: Composition-based stats.
Identities = 33/175 (18%), Positives = 61/175 (34%), Gaps = 25/175 (14%)
Query: 7 KIALFIDGANLYASSKALGFDID-YRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
++A+ ID N + I+ +LL+ V Y Q++ + P
Sbjct: 10 RLAILIDADNTF-------RFINVIDELLEEISKYGDVSIRRIYGDWTETKMQRWKEILP 62
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
+ + +++ G+ S++ ++ A+D + L+ I S D F
Sbjct: 63 ----------KYAIQPIQQYANTKGKNSTDSALIID-AMDLLYTAP-LDGFCIVSSDSDF 110
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
T L L+ K+V D L + F+ + L E DP E
Sbjct: 111 TRLATRLRESGKQVYGFGEQK-----TPDSLIAACNKFIYIEILSKEKLSDPPEP 160
>gi|113869183|ref|YP_727672.1| hypothetical protein H16_A3229 [Ralstonia eutropha H16]
gi|113527959|emb|CAJ94304.1| conserved hypothetical protein [Ralstonia eutropha H16]
Length = 265
Score = 60.9 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/161 (17%), Positives = 54/161 (33%), Gaps = 30/161 (18%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
++A+ +D N ++ + +DY L+ V+ + Q +
Sbjct: 11 RVAVLVDCDN---TTPEI---LDYA--LRVVAQFGRVV-------LRRGYGNQSTLGKTW 55
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124
+ L F ++ G+ D+ LA+DA E + + + D
Sbjct: 56 QEALVRQAFT----PCLQYQYAAGKNTA----DIALALDALEAMFDHRADKFCLVTSDSD 107
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165
F L L+ + V IV + LR +D F +
Sbjct: 108 FAYLCRKLRERGATVCIVGESK-----TPEALRNASDQFFE 143
>gi|303244983|ref|ZP_07331306.1| protein of unknown function DUF88 [Methanothermococcus okinawensis
IH1]
gi|302484635|gb|EFL47576.1| protein of unknown function DUF88 [Methanothermococcus okinawensis
IH1]
Length = 238
Score = 60.9 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/166 (16%), Positives = 57/166 (34%), Gaps = 32/166 (19%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
++AL +DG N+ F+ID K+ + ++ Y
Sbjct: 20 NNRMALLVDGPNM----LRKEFNIDLDKIREVLDEFGTIVIGRVYLNQYASD-------- 67
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGD 122
L++ + GF+ +DVE+AV+ E ++ +V + D
Sbjct: 68 KLIEAIANQGFEPRI--------------SAGDVDVEMAVEGTELIFNNNIDTIVYMTRD 113
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
F + + KK+ ++ S ++ AD+ + +
Sbjct: 114 ADFLPAIRKAKEHGKKIIVIGAEPGF----STAIQNIADHVIKIEE 155
>gi|84684164|ref|ZP_01012066.1| hypothetical protein 1099457000262_RB2654_16986 [Maritimibacter
alkaliphilus HTCC2654]
gi|84667917|gb|EAQ14385.1| hypothetical protein RB2654_16986 [Rhodobacterales bacterium
HTCC2654]
Length = 234
Score = 60.9 bits (147), Expect = 7e-08, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 39/98 (39%), Gaps = 7/98 (7%)
Query: 87 ENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVST 144
+ + K++ D+ L +DA + + V+ S D FT L ++ + V
Sbjct: 65 QESANTKGKNASDIGLVIDAMDLLHTGRFDGFVLVSSDSDFTALANRIREQGLTV----- 119
Query: 145 VLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182
+ + LR F+ + + +E A P E KK
Sbjct: 120 IGIGEGKTPESLRNVCSRFVMIENIVDEEAEKPAEKKK 157
>gi|149184904|ref|ZP_01863221.1| hypothetical protein ED21_17662 [Erythrobacter sp. SD-21]
gi|148831015|gb|EDL49449.1| hypothetical protein ED21_17662 [Erythrobacter sp. SD-21]
Length = 205
Score = 60.9 bits (147), Expect = 8e-08, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 56/156 (35%), Gaps = 23/156 (14%)
Query: 11 FIDGANLYASSKAL----GFDIDYRKLLKAFRS--RAIVIRAYYYTTVVGDPEQQF--SP 62
FIDG NL+ +K L + D L + YT + Q
Sbjct: 13 FIDGQNLFKQAKRLFGHREPNFDPVALHREVSRMAGFAPGPVRVYTGIPAANRQPRWHLF 72
Query: 63 LHPLLDWLHYNGFQVVAKVA----KEFTENCGR-----KRVKSSMDVELAVDAFEQSEG- 112
+ + + G V + ++ + G + + +D+ +A+D +
Sbjct: 73 WNNKIQAMKRAGVTVTTRPLRYRKRQLFDEDGEVETITQAEEKGIDIRIALDLVRMARRE 132
Query: 113 -LEHLVIFSGDGCFTTLVAAL----QRKVKKVTIVS 143
L+ +I+S D +V+ + Q + +++ + S
Sbjct: 133 ELDAAIIYSQDQDLNEVVSEIEAISQLQGREIPLAS 168
>gi|297619281|ref|YP_003707386.1| hypothetical protein Mvol_0754 [Methanococcus voltae A3]
gi|297378258|gb|ADI36413.1| protein of unknown function DUF88 [Methanococcus voltae A3]
Length = 253
Score = 60.5 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 31/179 (17%), Positives = 60/179 (33%), Gaps = 36/179 (20%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
K+AL IDG N+ F++D K+ A ++ Y L
Sbjct: 24 KMALLIDGPNM----LRKEFNVDLDKIRDAVEQFGTIVVGRVYLNQYASD--------KL 71
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGC 124
++ + GF+ +DVE+AVD + ++ +V + D
Sbjct: 72 IEAIANQGFEPRI--------------SAGDVDVEMAVDGTDLVHNKNIDTIVYMTRDAD 117
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM----DLAYLKNEIARDPDE 179
F + + + +V S ++ AD+ + D K ++ + E
Sbjct: 118 FLPAMRKAKENGVGIIVVGAEPGF----SMAIQNIADHVIKVEEDFELNKQKLEQKKRE 172
>gi|296118467|ref|ZP_06837045.1| conserved hypothetical protein [Corynebacterium ammoniagenes DSM
20306]
gi|295968366|gb|EFG81613.1| conserved hypothetical protein [Corynebacterium ammoniagenes DSM
20306]
Length = 444
Score = 60.5 bits (146), Expect = 9e-08, Method: Composition-based stats.
Identities = 35/172 (20%), Positives = 63/172 (36%), Gaps = 29/172 (16%)
Query: 6 EKIALFIDGANL---YASSKALG----FDIDYRKLLKAFRS------RAIVIRAYYYTTV 52
E+ +F+D + L + +S +G +ID +++ RS V R +Y +
Sbjct: 3 ERTVVFVDTSYLLASFYNSWEIGARGQLEIDLPEVVATLRSMIENQIGHPVHRQNWYDGI 62
Query: 53 VGDPEQQFSPLHPLLDWLHY-NGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS- 110
+ H L +G Q+ E+ G +R + ++D L D +
Sbjct: 63 PD------TGPHRYQRALRTCDGVQLRTGQLIEW----GERRTQKAVDTRLVADMVVTAM 112
Query: 111 -EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
+ V+ SGD V+ +V + SM+S LR D
Sbjct: 113 NQHFTDFVLVSGDADMIPGVSEATNNGMRVHLYGF--GWDSMSS-ALRHACD 161
>gi|298708071|emb|CBJ30424.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 825
Score = 60.5 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/170 (16%), Positives = 59/170 (34%), Gaps = 42/170 (24%)
Query: 7 KIALFIDGANLYAS--SKALGFDI----------DYRKLLKAF----------------- 37
K+ +FIDG LY S + + +Y +
Sbjct: 188 KVMVFIDGTWLYYSFFGRGERCHVSAKLGPGWVYEYNVKWEMLPVIISRAVHAQLARYGQ 247
Query: 38 -RSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKS 96
V+R +++ D ++ + + + + F+V E C
Sbjct: 248 SSRLVEVVRTVVFSSARKDTDKDSTRMRMF-NAMREKNFEVHMATTVGVQEKC------- 299
Query: 97 SMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS 143
+D+ LAV+ + + + V+ +GD F +A ++K ++V + S
Sbjct: 300 -IDIALAVEMMHYATIPDTYDVGVLVTGDKDFMPAMARTRQKGRRVCLCS 348
>gi|134045586|ref|YP_001097072.1| hypothetical protein MmarC5_0543 [Methanococcus maripaludis C5]
gi|132663211|gb|ABO34857.1| protein of unknown function DUF88 [Methanococcus maripaludis C5]
Length = 193
Score = 60.5 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/158 (19%), Positives = 56/158 (35%), Gaps = 32/158 (20%)
Query: 9 ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68
AL IDG N+ F++D K+ A ++ Y L++
Sbjct: 2 ALLIDGPNM----LRKEFNVDLDKVRDALEQFGDIVVGRVYLNQYASD--------KLIE 49
Query: 69 WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFT 126
+ GF+ +DVE+AVD E + L+ LV + D F
Sbjct: 50 AIANQGFEPRI--------------SAGDVDVEMAVDGTELIFNKNLDTLVYMTRDADFL 95
Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
+ + + K++ +V S ++ AD+ +
Sbjct: 96 PAIRKAKERGKQIIVVGAEPGF----STAIQNIADHVI 129
>gi|251772713|gb|EES53276.1| protein of unknown function DUF88 [Leptospirillum
ferrodiazotrophum]
Length = 307
Score = 60.5 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 47/121 (38%), Gaps = 7/121 (5%)
Query: 55 DPEQQFSPLHPL--LDWLHYNGFQVV--AKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110
D Q+ S + L ++V + + G + +D+ + +D +
Sbjct: 128 DEIQKRSSFLEFKYVGQLVLRPYRVREMQRDKEGGILYQGTVEGEKGVDIGITIDMIAKM 187
Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMA---SDQLRRQADYFMDLA 167
+ VI SGD F L+ L+ ++K V +S ++ S Q++ DYF +
Sbjct: 188 PHYDAAVIVSGDTDFIPLIQYLKDQLKLVYSLSLSRTENGQVQIFSPQIKSAVDYFHAIP 247
Query: 168 Y 168
Sbjct: 248 E 248
>gi|327480971|gb|AEA84281.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166]
Length = 220
Score = 60.5 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 9/81 (11%)
Query: 99 DVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
D+ LA+DA E + + + D F L L+ + V IV D L
Sbjct: 30 DIALALDAMEALFDHRADTFCLVTSDSDFAYLCRKLRERGATVCIVG-----EPKTPDAL 84
Query: 157 RRQADYFMDLAYLKNEIARDP 177
R +D F + + + E ++P
Sbjct: 85 RNASDQFFE--WRREEHFQEP 103
>gi|320101761|ref|YP_004177352.1| hypothetical protein Isop_0206 [Isosphaera pallida ATCC 43644]
gi|319749043|gb|ADV60803.1| hypothetical protein Isop_0206 [Isosphaera pallida ATCC 43644]
Length = 493
Score = 60.5 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 41/167 (24%), Positives = 70/167 (41%), Gaps = 19/167 (11%)
Query: 8 IALFIDGANL---YASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
A+F D NL Y S+ L ++ ++L++ R+ + + + + + L
Sbjct: 6 TAIFYDLENLLKGYNFSQQLLTNLSLVEILESIRATNRLGKVALQRAYANWSDPRLASLR 65
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSG 121
++ L + QV R K++ D+++A+DA + + GLE VI SG
Sbjct: 66 GEVNDLGIDPIQVF---------GFARDSRKNAADIQMAIDAIDLAHTRPGLEIFVIVSG 116
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
DG F+ L L K V + S A+ R D F+ LA
Sbjct: 117 DGGFSALARKLHEYGKTV----IGCAYQSAANRTFRAVCDEFVWLAD 159
>gi|307322651|ref|ZP_07601984.1| protein of unknown function DUF88 [Sinorhizobium meliloti AK83]
gi|306891697|gb|EFN22550.1| protein of unknown function DUF88 [Sinorhizobium meliloti AK83]
Length = 193
Score = 60.1 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 46/167 (27%), Positives = 77/167 (46%), Gaps = 8/167 (4%)
Query: 10 LF-IDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68
+F IDG++ L D L + A + A YY V + E+ L
Sbjct: 21 IFLIDGSHYDRLRSVLESPFDLSALAHIASNGAPLDHAIYYRDVRDESEEA--RQRSLFG 78
Query: 69 WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTL 128
WL +NGF V + + R+R +++ VELAVDA + + ++I + D L
Sbjct: 79 WLKHNGFMVK---GRRHSSGEPRERYGTNL-VELAVDALLLAHSGDRVLILAADAKLAPL 134
Query: 129 VAALQRKVKKVTIVSTVLSDPSMA-SDQLRRQADYFMDLAYLKNEIA 174
+AAL+ VT++ST + ++A + L A+ F++L + IA
Sbjct: 135 LAALRDDDIDVTLISTEDAPNTIAPARHLIENANRFLELKSVLEWIA 181
>gi|152983068|ref|YP_001352700.1| hypothetical protein mma_1010 [Janthinobacterium sp. Marseille]
gi|151283145|gb|ABR91555.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
Length = 236
Score = 60.1 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 51/169 (30%), Gaps = 40/169 (23%)
Query: 4 PREKIALFIDGAN-----LYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58
+++A+ +D N L + L+ V+ Y
Sbjct: 7 QNDRVAVLVDCDNTSPEILEYA-------------LRVVAQFGRVVVRRGY-------GN 46
Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHL 116
+ + + L F ++ G+ D+ LA+DA E +
Sbjct: 47 HATLANKWQEALVRLAFT----PCLQYQYAAGKNTS----DIALALDALEDLFDHRADTY 98
Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165
+ + D F L L+ + V IV D LR +D F +
Sbjct: 99 CLVTSDSDFAYLCRKLRERGATVCIVGEEK-----TPDALRNASDQFFE 142
>gi|154148166|ref|YP_001406735.1| hypothetical protein CHAB381_1180 [Campylobacter hominis ATCC
BAA-381]
gi|153804175|gb|ABS51182.1| protein containing DUF88 [Campylobacter hominis ATCC BAA-381]
Length = 259
Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/175 (18%), Positives = 57/175 (32%), Gaps = 39/175 (22%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
EK A+FID N+ K +I Y PE ++
Sbjct: 2 NEKYAIFIDAENVSY---------------KYINKVFELINVY--------PEPAIRRIY 38
Query: 65 PLLDWLHYNGFQ-----VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLE--HLV 117
+ G++ K ++F G K++ D+ L +D E + + +
Sbjct: 39 GDFSSQNLLGYKDEILSHALKPVQQFHSPNG----KNAADIALVIDIMEILNNTDIKNFI 94
Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
I S DG F +L ++ K V + + + D F L + E
Sbjct: 95 IVSSDGDFASLAIKIREKGGFVIGIGENKTQ-----INFIKACDEFFYLNEPEPE 144
>gi|295084937|emb|CBK66460.1| Uncharacterized conserved protein [Bacteroides xylanisolvens XB1A]
Length = 207
Score = 59.8 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/174 (14%), Positives = 57/174 (32%), Gaps = 19/174 (10%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDY-----RKLLKAFRSRAIVIRAYYYTTVVGDPE 57
+ ++K+ +++DG N Y K+ + + Y +S ++ Y++ D
Sbjct: 2 EDKKKVIVYVDGFNFYYGLKSKKWKMCYWLDLVSFFNSFLKSYQELVEVNYFSARPTDAG 61
Query: 58 QQFSPLHPLLDWLHYNGFQVVA-----KVAK-EFTENCGRKRVKSSMDVELAVDAFEQS- 110
+ F ++ K K + + DV +A +
Sbjct: 62 KHDRQDKLFQANKCNPKFNLILGKYLKKEIKCRYCGGIIHSFEEKETDVRIATKILSDAY 121
Query: 111 -EGLEHLVIFSGDGCFTTLVAALQRKV--KKVTIVSTVLSDPSMASDQLRRQAD 161
+ + +I S D V ++ +KV + P+ S L +D
Sbjct: 122 KKRCDIAIIVSADSDLIPPVELIREFNPLQKVYV----YFPPNRYSSNLSNLSD 171
>gi|332524909|ref|ZP_08401095.1| hypothetical protein RBXJA2T_03833 [Rubrivivax benzoatilyticus JA2]
gi|332108204|gb|EGJ09428.1| hypothetical protein RBXJA2T_03833 [Rubrivivax benzoatilyticus JA2]
Length = 263
Score = 59.8 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/166 (16%), Positives = 49/166 (29%), Gaps = 40/166 (24%)
Query: 7 KIALFIDGAN-----LYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
++A+ +D N L + L+ V+ + +
Sbjct: 11 RVAVLVDCDNTTPEVLEHA-------------LRVVAQFGRVV-------LRRGYGNHTT 50
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIF 119
+ D L F ++ G+ D+ LA+DA E + +
Sbjct: 51 LANRWQDALVRLAFT----PCLQYQYAAGKNTS----DIALALDAIEALFDRRADTFCLV 102
Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165
+ D F L L+ + V IV LR +D F +
Sbjct: 103 TSDSDFAYLCRKLRERGATVHIVGESK-----TPAALRNASDQFFE 143
>gi|254225637|ref|ZP_04919245.1| protein of unknown function [Vibrio cholerae V51]
gi|125621852|gb|EAZ50178.1| protein of unknown function [Vibrio cholerae V51]
Length = 259
Score = 59.8 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/172 (20%), Positives = 63/172 (36%), Gaps = 29/172 (16%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
+ +KIA+ ID N + +DY +LK ++ Y D + +
Sbjct: 5 NSEKKIAVLIDAENAQYAV------LDY--VLKELSKHGHILVKKAYADWSSDCLKNWKQ 56
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
L+ L N ++F+ G K+S D + +DA + S+ + + S
Sbjct: 57 P---LNELAIN-------PIQQFSYTQG----KNSSDAAMIIDAMDLLYSDKYDAFALIS 102
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
D FT L + L K+ I + + R D F+ LK+
Sbjct: 103 SDSDFTKLASRL----KESEIYVFGVGEKK-TPIAFRNACDDFIYTEVLKDR 149
>gi|332703414|ref|ZP_08423502.1| protein of unknown function DUF88 [Desulfovibrio africanus str.
Walvis Bay]
gi|332553563|gb|EGJ50607.1| protein of unknown function DUF88 [Desulfovibrio africanus str.
Walvis Bay]
Length = 179
Score = 59.8 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/186 (15%), Positives = 60/186 (32%), Gaps = 22/186 (11%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
+++ +DG+ L + K DY KL +Y + +
Sbjct: 1 MNEKRVIWIVDGSYLLKAPKG---KFDYLKLKDTLEDLNGCP--FYESYFLDSTLDPSDA 55
Query: 63 LHPLLDWLHYNG----------FQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG 112
+ WL ++V + + V+ +DV + +
Sbjct: 56 QNAFYTWLKTAPPKGPKMRVRLYKVKTLSFRCPNGEYVERHVQKGVDVGITTLLIRLATQ 115
Query: 113 --LEHLVIFSGDGCFTTLVAALQR-KVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
+ LV+ +GDG F ++ ++ K+ + + S L+ AD + L
Sbjct: 116 GMYDRLVLSTGDGDFEDAISYIKEDLHKEFWLAGFTDT----ISADLQCYADRVVWLDDH 171
Query: 170 KNEIAR 175
+I +
Sbjct: 172 WEKIRK 177
>gi|121594076|ref|YP_985972.1| hypothetical protein Ajs_1706 [Acidovorax sp. JS42]
gi|120606156|gb|ABM41896.1| protein of unknown function DUF88 [Acidovorax sp. JS42]
Length = 507
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/198 (18%), Positives = 70/198 (35%), Gaps = 39/198 (19%)
Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP- 62
PR K ALF+D N+++ + L D F S+ ++ + P +
Sbjct: 12 PRMKSALFVDFDNVFSGLRRL----DPIA-ADHFASQPQSWM-HWIAQSLEPPPHATAGA 65
Query: 63 --------------LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELA---VD 105
+ GF+++ A K+S D+ + VD
Sbjct: 66 RRLLVRRCYLNPQVYQRFRPAFNRAGFEIIDCPAM-------TSGGKTSTDIHMVLDIVD 118
Query: 106 AFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTI--VSTVLSDPSMASDQLRRQADYF 163
+ + ++ S D FT ++ L+R ++ T+ + + ++D L Q D F
Sbjct: 119 LLQHQVHYDEFIVLSADADFTPVLRKLRRWDRRTTVLAIGFPSAAYQASADLLIDQ-DAF 177
Query: 164 MDLAYLKNEIARDPDEDK 181
L+ + R+ E
Sbjct: 178 -----LREALRREETETP 190
>gi|227505072|ref|ZP_03935121.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940]
gi|227198337|gb|EEI78385.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940]
Length = 419
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/172 (18%), Positives = 60/172 (34%), Gaps = 29/172 (16%)
Query: 6 EKIALFIDGANL---YA----SSKALGFDIDYRKLLKAFRS------RAIVIRAYYYTTV 52
E+ +F+D + L + + +ID +++ S + R Y+Y +
Sbjct: 3 ERTLVFVDTSYLLASFYNSWETGARAQLEIDLPEVVNNLGSMVENQLGNRIHRQYWYDGI 62
Query: 53 VGDPEQQFSPLHPLLDWLHY-NGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS- 110
+ H L +G Q+ E+ G +R + ++D L D +
Sbjct: 63 PD------TGPHRYQRALRTCDGVQLRTGQLIEW----GERRTQKAVDTRLVADMILAAM 112
Query: 111 -EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
+ + V+ SGD V +V + SM+S LR D
Sbjct: 113 KQQVTDFVLVSGDADMIPGVQEAVNAGVRVHLYGF--GWDSMSS-ALRHACD 161
>gi|67921187|ref|ZP_00514706.1| hypothetical protein CwatDRAFT_5542 [Crocosphaera watsonii WH
8501]
gi|67857304|gb|EAM52544.1| hypothetical protein CwatDRAFT_5542 [Crocosphaera watsonii WH
8501]
Length = 76
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 26/36 (72%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKA 36
+ + R ++A+FIDG+NL+ ++ LG +IDY KLL
Sbjct: 41 VLENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCR 76
>gi|298292631|ref|YP_003694570.1| hypothetical protein Snov_2657 [Starkeya novella DSM 506]
gi|296929142|gb|ADH89951.1| protein of unknown function DUF88 [Starkeya novella DSM 506]
Length = 208
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/188 (19%), Positives = 73/188 (38%), Gaps = 13/188 (6%)
Query: 7 KIALFIDGANLYASSKALG----FDIDYRKLLK-AFRSRAIVIRAYYYTTVVGDPEQQFS 61
++A ++DG NLY + ALG ++ R L + +++R ++T +
Sbjct: 2 RVACYVDGFNLYHAVDALGDARLKWLNLRSLAESYLAPDDVLVRTVFFTAFNTWEHAKRQ 61
Query: 62 PLHPLLDWLHYNGFQVVA----KVAKE--FTENCGRKRVKSSMDVELAVDAFE--QSEGL 113
+ L G +VV KV K E + R + DV +A++ G+
Sbjct: 62 RHVNYVKALGATGVEVVLSRFDKVHKHCFTHERFCKLREEKQTDVAIAIEVMSDCYERGI 121
Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
E +++ + D +V ++ + + I A+ +L + +L +
Sbjct: 122 ERVLLITADSDQVPMVRRIRDRFPETIIFMIAPPKRLNAARELGQACSGVAELTAGRLRQ 181
Query: 174 ARDPDEDK 181
PDE +
Sbjct: 182 HALPDELR 189
>gi|298479635|ref|ZP_06997835.1| conserved hypothetical protein [Bacteroides sp. D22]
gi|298274025|gb|EFI15586.1| conserved hypothetical protein [Bacteroides sp. D22]
Length = 207
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/174 (16%), Positives = 59/174 (33%), Gaps = 19/174 (10%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDY-RKLLKAFRS----RAIVIRAYYYTTVVGDPE 57
+ ++K+ +++DG N Y K+ + + Y L+ F S ++ Y++ D
Sbjct: 2 EDKKKVIVYVDGFNFYYGLKSKKWKMCYWLDLVSFFNSFLKPYQELVEVNYFSARPTDAG 61
Query: 58 QQFSPLHPLLDWLHYNGFQVVA-----KVAK-EFTENCGRKRVKSSMDVELAVDAFEQS- 110
+ F ++ K K + + DV +A +
Sbjct: 62 KHDRQDKLFQANKCNPKFNLILGKYLKKEIKCRYCGGIIHSFEEKETDVRIATKILSDAY 121
Query: 111 -EGLEHLVIFSGDGCFTTLVAALQRKV--KKVTIVSTVLSDPSMASDQLRRQAD 161
+ + +I S D V ++ +KV + P+ S L +D
Sbjct: 122 KKRCDIAIIVSADSDLIPPVELIREFNPLQKVYV----YFPPNRYSSNLSNLSD 171
>gi|269956699|ref|YP_003326488.1| hypothetical protein Xcel_1911 [Xylanimonas cellulosilytica DSM
15894]
gi|269305380|gb|ACZ30930.1| protein of unknown function DUF88 [Xylanimonas cellulosilytica DSM
15894]
Length = 484
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/174 (20%), Positives = 66/174 (37%), Gaps = 30/174 (17%)
Query: 7 KIALFIDGANLYASS--------KALGFDIDYRKLLKAFRSRAI------VIRAYYYTTV 52
+ ++FID L AS+ G +++ KL++ R +A V+R Y+Y +
Sbjct: 4 RCSVFIDAGYLLASAATRVTGTSLRSGIHVEFSKLIEGIRRQAEQVSGLPVLRVYWYDSA 63
Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG 112
L +V ++ + + + +D+ L +D +
Sbjct: 64 RNAVPDAQQQRIGELP-------RVKLRLGRFGIDG-----QQKGVDLRLGLDLVTHARN 111
Query: 113 --LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS--MASDQLRRQADY 162
E ++ SGD FT V Q +V +++ + S S L+R AD
Sbjct: 112 QAAEVFLLVSGDDDFTEAVEEAQVHGVEVILLAAPDAHGSAHAVSRHLQRAADE 165
>gi|332667285|ref|YP_004450073.1| hypothetical protein Halhy_5375 [Haliscomenobacter hydrossis DSM
1100]
gi|332336099|gb|AEE53200.1| protein of unknown function DUF88 [Haliscomenobacter hydrossis DSM
1100]
Length = 315
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/157 (24%), Positives = 58/157 (36%), Gaps = 28/157 (17%)
Query: 7 KIALFIDG------ANLYASSKALGFDIDYRKLLKAFRS-----------RAIVIRAYYY 49
+I +F DG +N Y I R L R R +I A+Y+
Sbjct: 13 RIGVFYDGHYFLQVSNYYNYVHDRRSRISIRGLHDFVRKQVAIEEDEEFHRCQIIDAHYF 72
Query: 50 TTVVGDPEQQFS-----PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAV 104
+ E D L G V + F GR + K +DV LA+
Sbjct: 73 RGRLSASEASQRGNLLYFERAFDDILMSEGVSVHYLPVRNF---HGRWQEKG-IDVWLAL 128
Query: 105 DAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKV 139
+AFE + + + +VI + DG ++ LV L +V
Sbjct: 129 EAFEMTFYKRFDVVVILAADGDYSPLVRKLHSLGSRV 165
>gi|150400659|ref|YP_001324425.1| hypothetical protein Maeo_0221 [Methanococcus aeolicus Nankai-3]
gi|150013362|gb|ABR55813.1| protein of unknown function DUF88 [Methanococcus aeolicus Nankai-3]
Length = 193
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 57/166 (34%), Gaps = 32/166 (19%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
++AL IDG N+ F+ID K+ + V+ Y
Sbjct: 21 NNRMALLIDGPNM----LRKEFNIDLDKIREVLDEFGSVVVGRVYLNQYASD-------- 68
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGD 122
L++ + G++ +DVE+AVD E + ++ ++ + D
Sbjct: 69 KLIEAIANQGYEPKV--------------SAGDVDVEMAVDGTELIFNDTIDTIIYMTRD 114
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
F + + K + I+ S ++ ADY + +
Sbjct: 115 ADFLPAIRKAKEHGKNIIIIGAEPGF----STAIQNIADYVIKIED 156
>gi|325001928|ref|ZP_08123040.1| hypothetical protein PseP1_24341 [Pseudonocardia sp. P1]
Length = 148
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/166 (24%), Positives = 61/166 (36%), Gaps = 23/166 (13%)
Query: 1 MFDPREKIALFIDGANLYASSK-ALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58
M E+IAL +D NL ++ LG D+ + A R V+ Y E
Sbjct: 1 MAHEDERIALLLDYENLAIGARDGLGVVPFDFGPVADALAERGRVVVRRAYADWSAFDED 60
Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEH 115
+ + E + G K++ D++LAVDA E + E +
Sbjct: 61 RRLMARAQV-------------ELIEIPQRIG-GSRKNAADIKLAVDAIELAYEREFVTT 106
Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
I +GD FT L+ L+ K+V + S S L D
Sbjct: 107 FAIATGDSDFTPLMHKLRELDKRV----IGIGVQSSTSALLPPACD 148
>gi|331746820|ref|YP_004422857.1| hypothetical protein TERMP_02242 [Thermococcus barophilus MP]
gi|315185031|gb|ADT85215.1| hypothetical protein TERMP_02242 [Thermococcus barophilus MP]
Length = 182
Score = 59.0 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/152 (22%), Positives = 51/152 (33%), Gaps = 21/152 (13%)
Query: 7 KIALFIDGANLYASSK-------ALGFDIDYRKLLKAFRS-RAIVIRAYYYTTVVGDPEQ 58
K A+ IDG N+ + L DI+++K K S V A Y
Sbjct: 2 KAAVLIDGENVVMCLRDVVGGKVHLDKDINWKKFFKYLESLDYEVTIARIYA-----NPF 56
Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEH 115
F + + L G +VV KS+ D + VD ++
Sbjct: 57 IFLKNPHIANNLEKMGIKVVLAD-----STMKENGPKSTTDATMIVDGISILYERPAIDA 111
Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLS 147
+VI SGD F L + + V + S
Sbjct: 112 IVIVSGDRDFLPLAEKAKELGRTVLFAAFPDS 143
>gi|172039786|ref|YP_001799500.1| hypothetical protein cur_0106 [Corynebacterium urealyticum DSM
7109]
gi|171851090|emb|CAQ04066.1| hypothetical protein cu0106 [Corynebacterium urealyticum DSM 7109]
Length = 513
Score = 59.0 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/172 (18%), Positives = 60/172 (34%), Gaps = 29/172 (16%)
Query: 6 EKIALFIDGANL---YA----SSKALGFDIDYRKLLKAFRS------RAIVIRAYYYTTV 52
E+ +F+D + L + + +ID +++ + + R ++Y +
Sbjct: 3 ERTQIFVDTSYLLASFYNSWETGARAQLEIDLPEVVCTLGRIAQDQLKQPIHRQFWYDGI 62
Query: 53 VGDPEQQFSPLHPLLDWLHYN-GFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE 111
S H L G Q+ + E+ + R+ K+ +D L D +
Sbjct: 63 PE------SGPHRYQRSLRSEPGVQLRSGQLIEWGD---RRTQKA-VDTRLVADMVLAAV 112
Query: 112 G--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
+ +V+ SGD V +V + SM+S LR D
Sbjct: 113 RGNVSDIVLVSGDADMLPGVEEAVDAGIRVHLYGF--GWDSMSSQ-LRFACD 161
>gi|298531231|ref|ZP_07018631.1| conserved hypothetical protein [Desulfonatronospira thiodismutans
ASO3-1]
gi|298508841|gb|EFI32747.1| conserved hypothetical protein [Desulfonatronospira thiodismutans
ASO3-1]
Length = 214
Score = 58.6 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/153 (21%), Positives = 52/153 (33%), Gaps = 26/153 (16%)
Query: 3 DPREKIALFIDGANLYASSKALGFDI-------DYRKL----LKAF---RSRAIVIRAYY 48
P +KI +DG NLY S + G + D + L + F + + YY
Sbjct: 1 MPTKKITYLVDGFNLYHSVRKAGKQLKASTKWLDLKSLCISMIHNFKPKADKLELENIYY 60
Query: 49 ---YTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAK------EFTENCGRKRVKSSMD 99
Y + DP+ L+ L G +V K F K + D
Sbjct: 61 FSAYAYHLNDPD-MVQRHKSLVACLEDTGVKVEINRFKYKAIDCPFCNKTIPKYEEKETD 119
Query: 100 VELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVA 130
V +A+ E + + ++ SGD V
Sbjct: 120 VSIALKLQEIFIKDECDVAILVSGDTDLAPAVR 152
>gi|227834252|ref|YP_002835959.1| hypothetical protein cauri_2430 [Corynebacterium aurimucosum ATCC
700975]
gi|227455268|gb|ACP34021.1| hypothetical protein cauri_2430 [Corynebacterium aurimucosum ATCC
700975]
Length = 405
Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 59/171 (34%), Gaps = 27/171 (15%)
Query: 6 EKIALFIDGANL---YA----SSKALGFDIDYRKLLKAFRS------RAIVIRAYYYTTV 52
E+ +F+D + L + + +ID +++ + S + R Y+Y +
Sbjct: 3 ERTLVFVDTSYLLASFYNSWETGARAQLEIDLPEVVSSLGSMIENQVGNRIHRQYWYDGI 62
Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAF--EQS 110
++ + D G Q+ E+ G +R + ++D L D
Sbjct: 63 PDTGPHRYQRALRVCD-----GVQLRTGQLIEW----GERRTQKAVDTRLVADMIVSAMK 113
Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
+ V+ SGD V +V + SM+S LR D
Sbjct: 114 GQVTDFVLVSGDADMIPGVQEAVNNGVRVHLYGF--GWDSMSS-ALRHACD 161
>gi|271961974|ref|YP_003336170.1| hypothetical protein Sros_0396 [Streptosporangium roseum DSM 43021]
gi|270505149|gb|ACZ83427.1| hypothetical protein Sros_0396 [Streptosporangium roseum DSM 43021]
Length = 393
Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 72/191 (37%), Gaps = 37/191 (19%)
Query: 5 REKIALFIDGANL-------YASSK---ALGFDIDYRKLLKAF------RSRAIVIRAYY 48
++ ALF+D L ++ A+ + DY LLK R+ ++R Y+
Sbjct: 1 MDRCALFVDAGYLLADGAMAVHGTRHREAVSW--DYPGLLKLLGNLSKERTGLPLLRCYW 58
Query: 49 YTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE 108
Y V D L + ++++ GR+ +D ++ D
Sbjct: 59 YEASVEGRRTAE------HDALADLP-GLKLRLSRIRP---GRRE---GVDAQVHRDLMT 105
Query: 109 QSEG---LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165
+ + V+ SGD +V Q +VT+V S LR++ D ++
Sbjct: 106 LARNSAVCD-AVVVSGDEDLAQVVCDAQDLGIRVTVVHITADGSWAVSRSLRQECDDLIE 164
Query: 166 L--AYLKNEIA 174
+ ++L+ ++
Sbjct: 165 IGSSHLRPYVS 175
>gi|296126610|ref|YP_003633862.1| hypothetical protein Bmur_1576 [Brachyspira murdochii DSM 12563]
gi|296018426|gb|ADG71663.1| conserved hypothetical protein [Brachyspira murdochii DSM 12563]
Length = 209
Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 36/192 (18%), Positives = 73/192 (38%), Gaps = 28/192 (14%)
Query: 5 REKIALFIDGANLYASSKALGFD----IDYRKLLKAFRSRAIVIR-AYYYTTVVGDPEQQ 59
+K+ +IDG N+Y + L + I+Y L K+ +I YY++
Sbjct: 1 MDKVNFYIDGFNIYHAIDRLNNNKLKWINYYDLCKSLLKDNEIINKVYYFSAYAFWKPYS 60
Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCG-------------RKRVKSSMDVELAVDA 106
+ + + L Y +VV K+ ++N + DV +A+
Sbjct: 61 QNNHYIFIQALKYFNVEVVLGNFKKKSKNLIINDNNGNIIKYNYEYHEEKESDVNIAIYL 120
Query: 107 FEQS--EGLEHLVIFSGDGCFTTLVAALQRKVK--KVTIVSTVLSDPSMASDQLRRQADY 162
+ + ++ SGD + + + KV +V P++ + L+ +D
Sbjct: 121 VRDACKRNCDKAILLSGDSDLVPAIKMAKEENADLKVGVV----VPPNVQASSLKNISD- 175
Query: 163 FMDLAYLKNEIA 174
D+ LK +I+
Sbjct: 176 -FDIKLLKIDIS 186
>gi|220919728|ref|YP_002495031.1| hypothetical protein Mnod_8422 [Methylobacterium nodulans ORS 2060]
gi|219952148|gb|ACL62539.1| conserved hypothetical protein [Methylobacterium nodulans ORS 2060]
Length = 204
Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/150 (17%), Positives = 52/150 (34%), Gaps = 19/150 (12%)
Query: 5 REKIALFIDGANLYASSKALGF-DIDYRKLLKAFRS----RAIVIRAYYYTTVVGDPEQQ 59
++ ++DG NLY + L + + L + +S +I ++T
Sbjct: 1 MRRVIAYVDGFNLYHAIDDLQKPHLKWLDLWQLAQSICGTGETLIEVNFFTAYPTWKPGP 60
Query: 60 FSPLHPLLDWLHYNG-------FQVVAKVAKEFTENCGRKRVKSSMDVELAV----DAFE 108
+ L + G F+ + K G + DV +AV DAF
Sbjct: 61 MKRHQVYVKALRHAGVNCVIGHFKTKQRECK-RCGAQGDVHEEKETDVAIAVQITTDAFL 119
Query: 109 QSEGLEHLVIFSGDGCFTTLVAALQRKVKK 138
+G + +I S D + +++ +
Sbjct: 120 --DGYDRALIISADSDLAPALRTVRQHFPR 147
>gi|78189973|ref|YP_380311.1| hypothetical protein Cag_2020 [Chlorobium chlorochromatii CaD3]
gi|78172172|gb|ABB29268.1| hypothetical protein Cag_2020 [Chlorobium chlorochromatii CaD3]
Length = 212
Score = 58.2 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 56/154 (36%), Gaps = 24/154 (15%)
Query: 5 REKIALFIDGANLYA---SSKALGFD-----IDYRKL----LKAFRSRAIVIRAYYYTTV 52
++ +DG NLY +++A+ +D L L F A++ + +Y + +
Sbjct: 1 MNRVVFIVDGFNLYHSLKAAQAVQRPASTKWLDLCSLFSSQLYHFGKDAVLHKVFYISAL 60
Query: 53 V----GDPEQQFSPLHPLLDWLHYNGFQVVAKVAK------EFTENCGRKRVKSSMDVEL 102
+ L NG + K + + K + DV L
Sbjct: 61 AVHLEASNPNLTKRHQAYIKCLQANGVITLLNRFKRKDVFCKLCKRSFYKYEEKETDVML 120
Query: 103 AVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQR 134
A FEQ ++ + +V+ +GD + + Q+
Sbjct: 121 ATTLFEQLATDNCDTVVLVTGDTDLAPAIRSGQK 154
>gi|94265587|ref|ZP_01289332.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
gi|93453916|gb|EAT04271.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
Length = 207
Score = 58.2 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 75/193 (38%), Gaps = 30/193 (15%)
Query: 7 KIALFIDGANLYASSKA---LGFDIDYRKLLKAFRS-RAIVIRAYYYTTVVGD--PEQQF 60
+ +++IDG NLY + + +D R+++ + + Y+T +V Q
Sbjct: 2 RTSVYIDGFNLYYRALKGTPHKW-LDLRQMVANLLQPHHQITQLKYFTAIVSGIFDPSQP 60
Query: 61 SPLHPLLDWLHYN--------G-------FQVVAKVAKEFTENCGRKRVKSSMDVELAVD 105
+ + L ++ G F A + + + K + DV LA+
Sbjct: 61 NRQKSYIRALKHHIPNFSVHYGHFLSHEVFAPKAPLTRPPSFTRVIKTEEKGSDVNLAIH 120
Query: 106 AFEQS--EGLEHLVIFSGDGCFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADY 162
+ + + ++ S D + ++ + K + ++S +L S +L++ A +
Sbjct: 121 LLNDAWLDRYDCAIVISNDSDLVEPLRLVREQNGKVIGLISPLLRGHP--SRELQKHA-H 177
Query: 163 FMDLAYLKNEIAR 175
F+ ++ + R
Sbjct: 178 FV--KRIREGVLR 188
>gi|332559892|ref|ZP_08414214.1| hypothetical protein RSWS8N_12555 [Rhodobacter sphaeroides WS8N]
gi|332277604|gb|EGJ22919.1| hypothetical protein RSWS8N_12555 [Rhodobacter sphaeroides WS8N]
Length = 265
Score = 57.8 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 36/180 (20%), Positives = 67/180 (37%), Gaps = 42/180 (23%)
Query: 8 IALFIDGANL--YASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
+A+ ID NL +++ + + A R V+RAY +
Sbjct: 4 VAVLIDADNLSGKHAAQIMQ--------VAAALGRPTVLRAYVHA-------------QR 42
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDG 123
DW +GF+++ K++ D+ LA+DA E + ++ VI S DG
Sbjct: 43 PCDWHGVHGFRLM-----------HAGTGKNASDLLLALDAVELALRGDVDQFVIASSDG 91
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK-NEIARDPDEDKK 182
F+ L L+ VT V R F+++ + + + P ++ +
Sbjct: 92 DFSHLALRLREYGALVTGVGEDK-----TPQTFRAACADFVEIGARRLASVPKPPSKEAQ 146
>gi|84515798|ref|ZP_01003159.1| hypothetical protein SKA53_14151 [Loktanella vestfoldensis SKA53]
gi|84510240|gb|EAQ06696.1| hypothetical protein SKA53_14151 [Loktanella vestfoldensis SKA53]
Length = 246
Score = 57.8 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 37/93 (39%), Gaps = 7/93 (7%)
Query: 87 ENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVST 144
+ R K++ D+ L +DA + S + V+ S D FT L L+ V ++
Sbjct: 65 QETANTRGKNASDIGLVIDAMDILHSGRFDGFVLVSSDSDFTALANRLRENG--VVVIGI 122
Query: 145 VLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
+ LR + F+ + L ++ P
Sbjct: 123 GEGKAPV---SLRNVCNRFILIENLVDQEKEQP 152
>gi|147920799|ref|YP_685395.1| hypothetical protein RCIX674 [uncultured methanogenic archaeon
RC-I]
gi|110620791|emb|CAJ36069.1| conserved hypothetical protein [uncultured methanogenic archaeon
RC-I]
Length = 190
Score = 57.8 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 32/163 (19%), Positives = 61/163 (37%), Gaps = 34/163 (20%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIV-IRAYYYTTVVGDPEQQFSPL 63
R+ IAL +DG N+ F ID + + + + + D
Sbjct: 32 RKGIALLVDGPNM----LRKEFQIDLEVVRDILKRYGDIKVGKVFLNQYASD-------- 79
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSG 121
L++ + GF+ + +DV LAVDA E + ++ + I +
Sbjct: 80 -KLVEAIENQGFEPIV--------------GSGDVDVRLAVDAMELVFNQHIDTIAIVTR 124
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
D F +++ K+ + ++P + S L+ ADY +
Sbjct: 125 DADFKPVLSKASMYGKETIVFG---AEPGL-SIALKNVADYVI 163
>gi|253565602|ref|ZP_04843057.1| cold-shock protein DNA-binding [Bacteroides sp. 3_2_5]
gi|251945881|gb|EES86288.1| cold-shock protein DNA-binding [Bacteroides sp. 3_2_5]
Length = 208
Score = 57.8 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 35/190 (18%), Positives = 71/190 (37%), Gaps = 21/190 (11%)
Query: 1 MFDPREKIALFIDGANLYASSKAL----GFDIDYRKLLKAFRSR-----------AIVIR 45
M + I +FIDG ++AL +ID K + + +
Sbjct: 1 MIESITSIGIFIDGGYFTKINQALEEKLSLNIDITFFFKFIKEKIAYEYNLNTEFCQITE 60
Query: 46 AYY----YTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVE 101
++Y Y + + D L N K +E + ++ +DV
Sbjct: 61 SHYFRGRYRVNDANNKHLLFSERKFEDSLIENDVIFHYKHLREIQKEGEINVIEKGIDVW 120
Query: 102 LAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQ 159
A++A+E S + +++ +GD L+ L+ +++ LS S + LR +
Sbjct: 121 FALEAYELSLFRKFDFVILITGDADHEMLIKKLKALKIHTILLTWDLSPESATARLLREE 180
Query: 160 ADYFMDLAYL 169
A ++L+ +
Sbjct: 181 ACKHIELSEI 190
>gi|260432079|ref|ZP_05786050.1| protein containing DUF88 [Silicibacter lacuscaerulensis ITI-1157]
gi|260415907|gb|EEX09166.1| protein containing DUF88 [Silicibacter lacuscaerulensis ITI-1157]
Length = 238
Score = 57.4 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 30/173 (17%), Positives = 61/173 (35%), Gaps = 34/173 (19%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRA---YYYTTVVGDPEQQFS 61
E++A+ ID N+ +K + + F A + A Y G Q +S
Sbjct: 6 TERLAVLIDAENV--PAKH---------VAEIFEEVATLGEASLRRIYGDFSGGTPQGWS 54
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIF 119
+ ++F G+ D+ L +DA + S + V+
Sbjct: 55 AEKLAEYAIV---------PHQQFANTTGKNAG----DIALVIDAMDILHSGRFDGFVLV 101
Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
S D FT L + ++ + +V + + + + + F+ + +K E
Sbjct: 102 SSDSDFTRLASRIREQGLRVYGIGERKTPKAFVA-----ACNRFILIENIKKE 149
>gi|282899804|ref|ZP_06307766.1| hypothetical protein CRC_01671 [Cylindrospermopsis raciborskii
CS-505]
gi|281195286|gb|EFA70221.1| hypothetical protein CRC_01671 [Cylindrospermopsis raciborskii
CS-505]
Length = 439
Score = 57.4 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 40/173 (23%), Positives = 66/173 (38%), Gaps = 33/173 (19%)
Query: 8 IALFIDGANLYASSKALGFDID----------YRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
A+F D NL +K F D YR++L+ + Y +
Sbjct: 6 TAIFYDIENL---TKGYSFSKDFIKELSLKQIYRQILEVDIVN-KICLQRAYA---NWSD 58
Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114
+ S L ++ L + Q+ R K++ D++L VD + + +E
Sbjct: 59 HRLSLLRGEINELGIDPIQIF---------GFARYHKKNAADIQLVVDTMDITIRFPHIE 109
Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
VI SGDG F +L L K+V + + A+D + DYF+ L
Sbjct: 110 VYVIVSGDGGFASLAKKLHEYGKQV----IGCAYENSANDIFKSVCDYFIKLE 158
>gi|332527193|ref|ZP_08403265.1| hypothetical protein RBXJA2T_14776 [Rubrivivax benzoatilyticus JA2]
gi|332111617|gb|EGJ11598.1| hypothetical protein RBXJA2T_14776 [Rubrivivax benzoatilyticus JA2]
Length = 155
Score = 57.4 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 6/89 (6%)
Query: 95 KSSMDVELAVDAFEQSEGLEHLV--IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMA 152
K+S D+ +AVDA + L V I S D F LV L+ K +V L
Sbjct: 67 KNSTDIAMAVDAIDLVLALRPAVVAIASSDSDFAPLVQRLREKGCRV----VGLGQDGKT 122
Query: 153 SDQLRRQADYFMDLAYLKNEIARDPDEDK 181
D+ D F L++ + +A P +
Sbjct: 123 GDETISVYDEFTVLSHRRGGVATTPSRGR 151
>gi|293443850|ref|ZP_06662273.1| predicted protein [Escherichia coli B088]
gi|291323775|gb|EFE63202.1| predicted protein [Escherichia coli B088]
Length = 214
Score = 57.4 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 28/179 (15%), Positives = 66/179 (36%), Gaps = 20/179 (11%)
Query: 3 DPREKIALFIDGANLYASSK-----ALGFDIDYRKLLKAFRSRAIVI--RAYYYTTVVGD 55
P++++ FIDG NLY + + +D KL + S+ + ++++
Sbjct: 4 PPKKRVQCFIDGYNLYHAIDETRETKNHW-VDLWKLASKYISKNTCVLSDVFWFSAPPVH 62
Query: 56 PEQQFSPLH-PLLDWLHYNGFQVVAK--VAKEFTENCG-------RKRVKSSMDVELAVD 105
++ LH L + G VV+ K + N G + + DV LA+
Sbjct: 63 LTKRKQELHANYSAALQHCGVSVVSGKFKLKRVSCNAGSGCGKSFDRHEEKESDVNLAIG 122
Query: 106 AFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162
+ + + ++ + D + ++ + + + ++ L+ A+
Sbjct: 123 LVSAACNDEFDIAIVITADSDLCPPIKYVRNRFPNKQVWILIPPKRRSRANDLKAIANR 181
>gi|302870557|ref|YP_003839194.1| hypothetical protein Micau_6123 [Micromonospora aurantiaca ATCC
27029]
gi|302573416|gb|ADL49618.1| protein of unknown function DUF88 [Micromonospora aurantiaca ATCC
27029]
Length = 441
Score = 57.4 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 65/190 (34%), Gaps = 35/190 (18%)
Query: 7 KIALFIDGANLYASSKALGFDI------DY----RKL---------LKAFRSRAIVIRAY 47
+ AL++D N+++ L D+ D R+L + R + A
Sbjct: 5 RAALYLDFDNVFSGLYKLDPDVAVHFAEDPAGWLRRLATTATTDGARRWLVLRCYLNPAG 64
Query: 48 YYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVEL---AV 104
+ EQ GF V+ + K++ D+ + AV
Sbjct: 65 WVYRPDPGGEQTRLYFSKFRPSFVRAGFDVI--------DCPRYSSTKNAADIRIVVDAV 116
Query: 105 DAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
DA + VI SGD T L+ L+R ++ IVS + + + AD +
Sbjct: 117 DALSADTRYDEFVIASGDSDMTPLLQRLRRSDRRTMIVSPADAAEAFTA-----IADQVL 171
Query: 165 DLAYLKNEIA 174
D L +
Sbjct: 172 DSQQLLALVQ 181
>gi|84497148|ref|ZP_00995970.1| hypothetical protein JNB_13178 [Janibacter sp. HTCC2649]
gi|84382036|gb|EAP97918.1| hypothetical protein JNB_13178 [Janibacter sp. HTCC2649]
Length = 386
Score = 57.4 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 34/171 (19%), Positives = 60/171 (35%), Gaps = 28/171 (16%)
Query: 9 ALFIDGANLYASS--------KALGFDIDYRKLLKAFRSRAI------VIRAYYYTTVVG 54
A+++D L AS+ G ++DY L+ ++ ++R +Y +
Sbjct: 6 AVYVDVGYLLASAATRVTGSSLRSGIEVDYPGLIAGLVAQVEADSGLPLLRVNWYDSGAR 65
Query: 55 DPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEG 112
Q G K+ G ++ +DV L +D Q +
Sbjct: 66 SGGQPDYHQ-------DQIGLLPRIKLRLGRLSYAGEQK---GVDVRLGLDLALQGRARV 115
Query: 113 LEHLVIFSGDGCFTTLVAALQRKVKKVTIVST--VLSDPSMASDQLRRQAD 161
+ + + SGD T V Q +V ++S + S LRR AD
Sbjct: 116 ADVVYLVSGDDDLTEAVEEAQSAGVQVVLLSVPGLNGHGHAVSKHLRRAAD 166
>gi|322436968|ref|YP_004219180.1| hypothetical protein AciX9_3394 [Acidobacterium sp. MP5ACTX9]
gi|321164695|gb|ADW70400.1| hypothetical protein AciX9_3394 [Acidobacterium sp. MP5ACTX9]
Length = 275
Score = 57.1 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 36/185 (19%), Positives = 66/185 (35%), Gaps = 36/185 (19%)
Query: 5 REKIALFIDGANLY---------ASSKALGFDIDYRKLLKAFRS-------RAIVIRAYY 48
++ A+F+D LY A++ +D +L+ +S A ++R Y+
Sbjct: 1 MQRNAVFVDAGYLYSQSAVSLTGANAARPSLRLDEAELINQLKSLALNLSAGAQLLRIYW 60
Query: 49 YTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE 108
Y D + L+ K + + +D L D +
Sbjct: 61 Y-----DGAKNGMTAEQLVLA--------DMADVKVRLGSINSAGQQKGVDSLLVTDLID 107
Query: 109 QSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQ--LRRQADYFM 164
+ + VI +GDG V Q +V +V +PS AS LR++AD
Sbjct: 108 LARNQAISDAVIVTGDGDMRVAVQIAQSFGVRVHLVGL---EPSSASQSQLLRQEADTVH 164
Query: 165 DLAYL 169
++ +
Sbjct: 165 EIPKI 169
>gi|295836648|ref|ZP_06823581.1| conserved hypothetical protein [Streptomyces sp. SPB74]
gi|295826135|gb|EFG64694.1| conserved hypothetical protein [Streptomyces sp. SPB74]
Length = 310
Score = 57.1 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/193 (21%), Positives = 67/193 (34%), Gaps = 44/193 (22%)
Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRS-------RAIVIRAYYYTTVV 53
A+F+D LYA++ L GFD+D + L+ A + ++R Y+Y
Sbjct: 33 AIFVDAGYLYAAAGRLVAGTEDRKGFDLDAQGLIDALVDCASHVFPHSRLLRVYWY---D 89
Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
G + + + L K N + +D + D +
Sbjct: 90 GARRRIHTAEQQSIAELP---------DVKVRLGNLNANNQQKGVDSLIRGDIESLARHR 140
Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD---------Y 162
+ V+ GD V A Q +V + + LR QAD
Sbjct: 141 AIGDAVLLGGDEDLVPAVEAAQDFGARVHLWGIEAPEG------LRNQADPLLWEADAQR 194
Query: 163 FMDLAYLKNEIAR 175
+DLA+LK +AR
Sbjct: 195 TLDLAFLKPYVAR 207
>gi|291298318|ref|YP_003509596.1| hypothetical protein Snas_0791 [Stackebrandtia nassauensis DSM
44728]
gi|290567538|gb|ADD40503.1| protein of unknown function DUF88 [Stackebrandtia nassauensis DSM
44728]
Length = 335
Score = 57.1 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/187 (14%), Positives = 66/187 (35%), Gaps = 32/187 (17%)
Query: 7 KIALFIDGANLYASSKA--LG------FDIDYRKLLKAFRSR-------AIVIRAYYYTT 51
+ A+ ID LYA++ LG + +D KL+ +R ++R Y++
Sbjct: 15 RYAMLIDVGYLYAAAAEVLLGATSRREYKVDAEKLINTLITRAADQLPGGELLRVYWF-- 72
Query: 52 VVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE 111
++ + ++ + + K N + + +D + D + +
Sbjct: 73 -DAARDRVPTVDQRVIAAMA---------LVKVRLGNLNSRGQQKGVDAMIRTDLEQLAR 122
Query: 112 G--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
+ ++ +GD V Q +V + + +++L +AD L +
Sbjct: 123 HGAISEAILLAGDEDMVPAVEIAQAYGVRVHVWGVEPPYGTNQAERLLWEADT---LDEI 179
Query: 170 KNEIARD 176
E +
Sbjct: 180 SAEFCKP 186
>gi|302690852|ref|XP_003035105.1| hypothetical protein SCHCODRAFT_105532 [Schizophyllum commune H4-8]
gi|300108801|gb|EFJ00203.1| hypothetical protein SCHCODRAFT_105532 [Schizophyllum commune H4-8]
Length = 500
Score = 57.1 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/172 (19%), Positives = 64/172 (37%), Gaps = 24/172 (13%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGD--PEQ 58
MF EK+A+F D N ++ G+D+ + + + Y
Sbjct: 1 MFRSSEKVAVFWDYENCAPPAQVSGYDV-VDTIRGIGHRYGAICQLKAYLEPPRQYVDPS 59
Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEH--- 115
+ L L L +G + +C +K D + VD + L+H
Sbjct: 60 GTARLLALRTELQASGVSLT---------DCPHNGMKEVADHMMQVDMLAFA--LDHPAP 108
Query: 116 --LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165
+++ +GD F A L+ + +V I+S + L+ QAD +++
Sbjct: 109 ATVILITGDRDFAYATAVLRARRYRVIILSL-----PHIHETLKAQADEWLE 155
>gi|171060518|ref|YP_001792867.1| hypothetical protein Lcho_3848 [Leptothrix cholodnii SP-6]
gi|170777963|gb|ACB36102.1| protein of unknown function DUF88 [Leptothrix cholodnii SP-6]
Length = 461
Score = 57.1 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/189 (19%), Positives = 68/189 (35%), Gaps = 28/189 (14%)
Query: 7 KIALFIDGANLYASSKALGFDI--DYRK--------LLKAFRSRAIVIRAYYYTTVVGDP 56
K ALF+D N+Y+ + L I + + LL +V
Sbjct: 2 KSALFVDFDNVYSGLRKLDPTIADRFSRQPLRWVEWLLDDLPPPEHAPDGARRRLLVRRV 61
Query: 57 EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GL 113
++ GF+++ A K+S D+ + +D + +
Sbjct: 62 YLNPQVYQRYRAAFNHAGFEIIDCPAM-------TSEGKTSTDIHMVLDMVDLLQHQVHY 114
Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTI--VSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
+ ++FS D FT ++ L+R ++ T+ V + ++D L D F L++
Sbjct: 115 DEFIVFSADADFTPVLRKLRRWDRRTTVLAVGFPSAAYRASADLLID-TDLF-----LRD 168
Query: 172 EIARDPDED 180
I ED
Sbjct: 169 AIGVREAED 177
>gi|284038322|ref|YP_003388252.1| hypothetical protein Slin_3445 [Spirosoma linguale DSM 74]
gi|283817615|gb|ADB39453.1| protein of unknown function DUF88 [Spirosoma linguale DSM 74]
Length = 338
Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/161 (19%), Positives = 58/161 (36%), Gaps = 28/161 (17%)
Query: 7 KIALFIDG------ANLYASSKALGFDIDYRKLLKAFRSR-----------AIVIRAYYY 49
+I +F DG +N Y S I L R + ++ A+Y+
Sbjct: 9 RIGVFYDGNYFLHVSNYYNYSHERRSRISISGLHAFIRRQVAEEEGVNERLCQIVDAHYF 68
Query: 50 TTVVGDPEQQFSPLHPLLDWLHYN-----GFQVVAKVAKEFTENCGRKRVKSSMDVELAV 104
+ E D L + G K + R + +DV LA+
Sbjct: 69 RGRLNAHEANQRGNQLFYDRLFDDILMSEGVVTHYLPVKTYQG----YRQEKGIDVWLAL 124
Query: 105 DAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVS 143
+AFE ++ + +V+ + DG + L+ L ++ ++S
Sbjct: 125 EAFELAQYKKFDVVVLITSDGDYVPLIRKLNTLGSRIMVLS 165
>gi|258510539|ref|YP_003183973.1| hypothetical protein Aaci_0532 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257477265|gb|ACV57584.1| protein of unknown function DUF88 [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 321
Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/171 (21%), Positives = 64/171 (37%), Gaps = 29/171 (16%)
Query: 3 DPREKIALFIDGANLYASSKA-LGFDID--------YRKLLKAF-RSRAIVIRAYYYTTV 52
D + +A+F+D N+Y + D + KL + R + +AY
Sbjct: 50 DKMDNVAIFVDYDNVYWTLYNNYRHHPDHGDDDKNLFVKLWDFYGRDNVRIFKAYA---- 105
Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS-- 110
D EQ S L L + ++ + + K++ D+EL++DA E +
Sbjct: 106 --DFEQIKSDLTRLQ--------KRRVQIRHVYANGKTEQGRKNASDIELSIDAIELTHT 155
Query: 111 -EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160
+ VI + D L++ L K K+V + + LR A
Sbjct: 156 DPEITCYVIVTADSDMIPLMSRLMYKGKRVELFYIESALAKHT--DLRNYA 204
>gi|55378280|ref|YP_136130.1| hypothetical protein rrnAC1502 [Haloarcula marismortui ATCC 43049]
gi|55231005|gb|AAV46424.1| unknown [Haloarcula marismortui ATCC 43049]
Length = 148
Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/160 (20%), Positives = 53/160 (33%), Gaps = 31/160 (19%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
D +++ LF+DG N+ FD+D ++ + Y +
Sbjct: 12 DSPQRVGLFVDGPNV----LRSEFDVDLDEVRDIAAEYGPLAVTRLYV--------DQNA 59
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA--FEQSEGLEHLVIFS 120
L+ GF+V +DV LAVDA + ++ L + S
Sbjct: 60 SPGLIQAAEARGFEVRT--------------TSGDVDVRLAVDATNAAVAGQIDVLAVAS 105
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160
D F + R+ K ++ SD LR A
Sbjct: 106 RDTDFKPALEVAAREGVKTVAIAPGEYGR---SDALRNAA 142
>gi|260775864|ref|ZP_05884760.1| hypothetical protein VIC_001249 [Vibrio coralliilyticus ATCC
BAA-450]
gi|260608280|gb|EEX34449.1| hypothetical protein VIC_001249 [Vibrio coralliilyticus ATCC
BAA-450]
Length = 290
Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 67/185 (36%), Gaps = 34/185 (18%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
+KIA+ ID N S A +++ S ++ Y ++
Sbjct: 45 NKKIAVLIDSDNTPHSKLA--------AIIEELSSFGHIVVKRAY---GDFSSERLKNWK 93
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122
L+ L A + + K++ D + +DA + S+ + + S D
Sbjct: 94 QPLNEL-----------AIQAKQQFAYTSGKNATDSLMIIDAMDLLYSQRFDAFALISSD 142
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK-----NEIARDP 177
FT+L L+ ++ ++ +M + D F+ + L+ ++ R P
Sbjct: 143 SDFTSLATRLRE--SEIHVIGV---GKAMTPSSFKNACDDFVAIENLQGATEVDDAQRRP 197
Query: 178 DEDKK 182
+++ +
Sbjct: 198 NQNAE 202
>gi|225020005|ref|ZP_03709197.1| hypothetical protein CORMATOL_00001 [Corynebacterium matruchotii
ATCC 33806]
gi|224947140|gb|EEG28349.1| hypothetical protein CORMATOL_00001 [Corynebacterium matruchotii
ATCC 33806]
Length = 404
Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 40/191 (20%), Positives = 70/191 (36%), Gaps = 38/191 (19%)
Query: 6 EKIALFIDGANL---YASSKALGF----DIDYRKLLKAFRS------RAIVIRAYYYTTV 52
E+ +F+D + L + +S +G +ID +++ + V R ++Y +
Sbjct: 3 ERTQIFVDTSYLLASFYNSWEIGARAQLEIDLPAVVRTLGTMVTEQFEQPVHRQFWYDGI 62
Query: 53 VGDPEQQFSPLHPLLDWLHY-NGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE 111
+ H L +G Q+ A E+ G +R + ++D L D S
Sbjct: 63 PD------TGPHRYQRALRTCDGVQLRAGQLIEW----GERRTQKAVDTRLVADMVLTSV 112
Query: 112 G--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
+ +V+ SGD V +V + SM+S LR D + L
Sbjct: 113 RQEVTDIVLVSGDADMIPGVQEAVNHGIRVHLYGF--GWDSMSS-ALRHACDSLVIL--- 166
Query: 170 KNEIARDPDED 180
DP ED
Sbjct: 167 ------DPRED 171
>gi|219128471|ref|XP_002184436.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404237|gb|EEC44185.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 779
Score = 56.3 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/109 (18%), Positives = 40/109 (36%), Gaps = 12/109 (11%)
Query: 38 RSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSS 97
++RA +T+ D D N + V R +
Sbjct: 299 ARPMEIVRASVFTSYKADTPTSSFRYQMFQDMQAAN-YDVHMMETV--------GRGEKC 349
Query: 98 MDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS 143
+D++LAV+ + + ++ +GD F + ++K +KV +VS
Sbjct: 350 VDIQLAVEMMHYATVPNAYDVALLLTGDKDFMPAMIRTRQKARKVGLVS 398
>gi|220936103|ref|YP_002515002.1| hypothetical protein Tgr7_2943 [Thioalkalivibrio sp. HL-EbGR7]
gi|219997413|gb|ACL74015.1| conserved hypothetical protein [Thioalkalivibrio sp. HL-EbGR7]
Length = 212
Score = 56.3 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 37/183 (20%), Positives = 63/183 (34%), Gaps = 23/183 (12%)
Query: 1 MFDPREKIALFIDGANLYASSKA---LGFDIDYRKL-LKAFRSRAIVIRAYYYTT---VV 53
M + + ++IDG N Y S + +D L ++ R ++R Y+T
Sbjct: 1 MSSSQLRTIVYIDGFNFYYGSLKGTDYKW-LDLEALFVRVLGERNNLVRIKYFTAKVQPT 59
Query: 54 GDPEQQFSPLHPLLDWLH--------YNGFQVVAKVAKEFTENCGR-----KRVKSSMDV 100
L + Y G + +V+ E R K + DV
Sbjct: 60 AQDPDVSIRQATYLRAIQKHSPKVEVYYGHFLRHRVSMENANPPPRLVHVWKNEEKGSDV 119
Query: 101 ELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRR 158
LA+ + + + VI S D + ++ KV + T + S QL+R
Sbjct: 120 NLALHVLNDAWQDAYDCAVIVSNDSDLAESLRLVKTHHDKVIGLVTPGAPKRKTSAQLKR 179
Query: 159 QAD 161
AD
Sbjct: 180 YAD 182
>gi|305681687|ref|ZP_07404493.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC
14266]
gi|305658847|gb|EFM48348.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC
14266]
Length = 406
Score = 56.3 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 40/191 (20%), Positives = 70/191 (36%), Gaps = 38/191 (19%)
Query: 6 EKIALFIDGANL---YASSKALGF----DIDYRKLLKAFRS------RAIVIRAYYYTTV 52
E+ +F+D + L + +S +G +ID +++ + V R ++Y +
Sbjct: 3 ERTQIFVDTSYLLASFYNSWEIGARAQLEIDLPAVVRTLGTMVTEQFEQPVHRQFWYDGI 62
Query: 53 VGDPEQQFSPLHPLLDWLHY-NGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE 111
+ H L +G Q+ A E+ G +R + ++D L D S
Sbjct: 63 PD------TGPHRYQRALRTCDGVQLRAGQLIEW----GERRTQKAVDTRLVADMVLTSV 112
Query: 112 G--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
+ +V+ SGD V +V + SM+S LR D + L
Sbjct: 113 RQEVTDIVLVSGDADMIPGVQEAVNHGIRVHLYGF--GWDSMSS-ALRHACDSLVIL--- 166
Query: 170 KNEIARDPDED 180
DP ED
Sbjct: 167 ------DPRED 171
>gi|312141909|ref|YP_004009245.1| hypothetical protein REQ_46160 [Rhodococcus equi 103S]
gi|311891248|emb|CBH50567.1| conserved hypothetical protein [Rhodococcus equi 103S]
Length = 339
Score = 56.3 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/171 (21%), Positives = 61/171 (35%), Gaps = 30/171 (17%)
Query: 10 LFIDGANLYASS--------KALGFDIDYRKLLKAF------RSRAIVIRAYYYTTVVGD 55
L+ID L AS+ G +DY KL+ + RS V+R ++Y +
Sbjct: 18 LYIDAGYLLASAATRVTGTSLRGGIHVDYAKLVSSLVDAAQARSGLPVLRVHWYDSARNG 77
Query: 56 PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--L 113
P + L +V ++ + G + +D+ + +D +
Sbjct: 78 VPD---PQQERIGELS----KVKLRLGR-----FGVNGEQKGVDLRIGLDLVAHARNGAS 125
Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTI--VSTVLSDPSMASDQLRRQADY 162
+ + SGD T V Q +V + V + P S L R AD
Sbjct: 126 DVFFLVSGDDDLTEAVDEAQVHGVQVVVFAVPSAEGKPHGVSRHLVRAADE 176
>gi|260774799|ref|ZP_05883701.1| hypothetical protein VIC_000167 [Vibrio coralliilyticus ATCC
BAA-450]
gi|260609224|gb|EEX35379.1| hypothetical protein VIC_000167 [Vibrio coralliilyticus ATCC
BAA-450]
Length = 259
Score = 56.3 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/172 (19%), Positives = 57/172 (33%), Gaps = 29/172 (16%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
D +KIA+ ID N + +D+ +LK ++ Y +
Sbjct: 5 DSEKKIAVLIDAENAQYAV------LDF--VLKELSKHGHILVKKAY---GDWSSECLKN 53
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
L+ L N ++F+ G K+S D + +DA + S + + S
Sbjct: 54 WKQPLNELAIN-------PIQQFSYTQG----KNSSDAAMIIDAMDLLYSNKYDAFALIS 102
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
D FT L + L+ + + R D F+ LK
Sbjct: 103 SDSDFTKLASRLKE-----SQIYVFGVGEKKTPLAFRNACDDFIYTEVLKER 149
>gi|187939647|gb|ACD38790.1| conserved hypothetical protein [Pseudomonas aeruginosa]
gi|187939724|gb|ACD38865.1| hypothetical protein PACL_0607 [Pseudomonas aeruginosa]
Length = 286
Score = 56.3 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/176 (15%), Positives = 55/176 (31%), Gaps = 31/176 (17%)
Query: 5 REKIALFIDGANLYASS---------KALGFDIDYRKLLKAF-------RSRAIVIRAYY 48
++ +F+D L+A + ++ ++ ++R Y+
Sbjct: 1 MNRLGIFVDAGYLFAQGSTAIAGNPERRTNLSLNEEAVVTQLLETAADLSGGTPLLRIYW 60
Query: 49 YTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE 108
Y + GD N +V G + K +D + +D E
Sbjct: 61 YDAI-GDRGPTLEQKR----LASSNNVKVRMGTL------NGSGQQKG-VDSMIVIDMIE 108
Query: 109 QS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDP-SMASDQLRRQAD 161
+ + V+ SGD V Q +V ++ S S L ++AD
Sbjct: 109 LARNHAIADAVLLSGDEDVRVGVQFAQSYGVRVHLIGIANEHDNSHQSLSLIQEAD 164
>gi|254884216|ref|ZP_05256926.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
gi|254837009|gb|EET17318.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
Length = 217
Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/144 (17%), Positives = 49/144 (34%), Gaps = 13/144 (9%)
Query: 4 PREKIALFIDGANLYASSKALGFD----IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
++++ ++IDG N Y K + +D KL+++F + A Y + +
Sbjct: 7 NKQRVIIYIDGFNFYYGLKTAPWKKYYWLDIVKLMESFLRPNQELIAVKYFSARPTDVGK 66
Query: 60 FSPLHPLLDWLHYNG-FQVVA-KVAKEFTE-----NCGRKRVKSSMDVELAVDAFEQS-- 110
N F+++ K K+ E N + DV +A +
Sbjct: 67 RKRQDAFFQANKENPKFKLILGKYLKKEIECFKCHNIIHTYEEKESDVRIATQIVADAFQ 126
Query: 111 EGLEHLVIFSGDGCFTTLVAALQR 134
+ +I S D V +
Sbjct: 127 HNCDLAIIVSADSDMIPAVELAKE 150
>gi|258648761|ref|ZP_05736230.1| conserved hypothetical protein [Prevotella tannerae ATCC 51259]
gi|260851088|gb|EEX70957.1| conserved hypothetical protein [Prevotella tannerae ATCC 51259]
Length = 238
Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/155 (16%), Positives = 57/155 (36%), Gaps = 16/155 (10%)
Query: 3 DPREKIALFIDGANLYASS------KALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP 56
+ ++++ ++IDG N Y + + +D KL ++F + A Y + D
Sbjct: 24 EEKQRVIVYIDGFNFYYGLKFTARWRKYYW-LDVVKLFESFMRPNQELIAVKYFSAKPDD 82
Query: 57 EQQFSPLHPLLDWLHYNG-FQVVA-KVAKEFT-----ENCGRKRVKSSMDVELAVDAFEQ 109
+Q + N F+++ K K+ +N + DV +A
Sbjct: 83 IEQSRRQNAFFQANKENPKFRLILGKYLKKEITCFKCKNVIHTYEEKETDVRIATQIVAD 142
Query: 110 S--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIV 142
+ + + ++ S D + + +KV +
Sbjct: 143 AYQKNCDVAIVVSADSDMVPAIELATQARQKVFVY 177
>gi|269124811|ref|YP_003298181.1| hypothetical protein Tcur_0546 [Thermomonospora curvata DSM 43183]
gi|268309769|gb|ACY96143.1| protein of unknown function DUF88 [Thermomonospora curvata DSM
43183]
Length = 426
Score = 55.9 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 51/147 (34%), Gaps = 16/147 (10%)
Query: 34 LKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKR 93
+ R + A + E GF+V+ +
Sbjct: 51 RRWLVLRCYLNPAGWVDYHPPLGEPSRLQFFRFRSSFISAGFEVI--------DCPRYNA 102
Query: 94 VKSSMDVELAVD---AFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS 150
K+ D+ +AVD A + VI SGD T L+ L+R ++ ++S+V + +
Sbjct: 103 TKNGADIRIAVDVVDALSADVTYDEFVIASGDSDMTPLLQRLRRADRRTVVMSSVDAAEA 162
Query: 151 MASDQLRRQADYFMDLAYLKNEIARDP 177
S AD ++ L + +P
Sbjct: 163 FIS-----IADRTINGQQLLELVQGEP 184
>gi|325672821|ref|ZP_08152515.1| hypothetical protein HMPREF0724_10296 [Rhodococcus equi ATCC 33707]
gi|325556074|gb|EGD25742.1| hypothetical protein HMPREF0724_10296 [Rhodococcus equi ATCC 33707]
Length = 328
Score = 55.9 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 36/171 (21%), Positives = 61/171 (35%), Gaps = 30/171 (17%)
Query: 10 LFIDGANLYASS--------KALGFDIDYRKLLKAF------RSRAIVIRAYYYTTVVGD 55
L+ID L AS+ G +DY KL+ + RS V+R ++Y +
Sbjct: 7 LYIDAGYLLASAATRVTGTSLRGGIHVDYAKLVSSLVDAAQARSGLPVLRVHWYDSARNG 66
Query: 56 PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--L 113
P + L +V ++ + G + +D+ + +D +
Sbjct: 67 VPD---PQQERIGELS----KVKLRLGR-----FGVNGEQKGVDLRIGLDLVAHARNGAS 114
Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTI--VSTVLSDPSMASDQLRRQADY 162
+ + SGD T V Q +V + V + P S L R AD
Sbjct: 115 DVFFLVSGDDDLTEAVDEAQVHGVQVVVFAVPSAEGKPHGVSRHLVRAADE 165
>gi|237784719|ref|YP_002905424.1| hypothetical protein ckrop_0084 [Corynebacterium kroppenstedtii DSM
44385]
gi|237757631|gb|ACR16881.1| hypothetical protein ckrop_0084 [Corynebacterium kroppenstedtii DSM
44385]
Length = 639
Score = 55.9 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 35/171 (20%), Positives = 63/171 (36%), Gaps = 27/171 (15%)
Query: 6 EKIALFIDGANL---YASSKALG----FDIDY----RKLLKAFRS--RAIVIRAYYYTTV 52
E+ +F+D + L + +S G +ID L + V R +Y +
Sbjct: 3 ERTLVFVDTSYLLASFYNSWEEGARTQLEIDLPEVCSVLDRMITQHVGQPVQRQNWYDGI 62
Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS-- 110
++ +D G Q+ A + E G++R + ++D L D +
Sbjct: 63 PDSGPHRYQRALRTVD-----GVQLRAGLLIE----TGQRRTQKAVDTRLVADMILAAVR 113
Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
+ +V+ SGD V +V + S SM S+ LR + D
Sbjct: 114 QQCSDMVLVSGDQDMIPGVVEASAMGVRVHLYGF--SWDSM-SNALRHKCD 161
>gi|119898152|ref|YP_933365.1| hypothetical protein azo1861 [Azoarcus sp. BH72]
gi|119670565|emb|CAL94478.1| hypothetical protein azo1861 [Azoarcus sp. BH72]
Length = 502
Score = 55.9 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/178 (19%), Positives = 65/178 (36%), Gaps = 33/178 (18%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTV-VGDPEQQF----- 60
K ALF+D N+Y+ + L D R L F R + +++ + D
Sbjct: 2 KSALFVDFDNVYSGLRKL----DPR-LADLFAQRPQDWLQWLISSLGLPDDAPVDAKRRV 56
Query: 61 ---------SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELA---VDAFE 108
+ GF+++ A K+S D+ + +D +
Sbjct: 57 LVRRCYLNPQAYQRFRWSFNLAGFEIIDCPAL-------TSEGKTSTDIHMVLDTIDLLQ 109
Query: 109 QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTI--VSTVLSDPSMASDQLRRQADYFM 164
+ +IFS D FT ++ L+R ++ T+ + + ++D L D F+
Sbjct: 110 HEAHYDEFIIFSADADFTPVLRKLRRWDRRTTVLAIGFPSAAYRASADLLIDV-DTFV 166
>gi|319442042|ref|ZP_07991198.1| hypothetical protein CvarD4_09805 [Corynebacterium variabile DSM
44702]
Length = 456
Score = 55.9 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/172 (19%), Positives = 60/172 (34%), Gaps = 29/172 (16%)
Query: 6 EKIALFIDGANL---YA----SSKALGFDIDYRKLLKAFRSRAI------VIRAYYYTTV 52
E+ +F+D + L + + +ID +++ + A+ V R +Y +
Sbjct: 3 ERTLVFVDTSYLLASFYNSWETGARSQLEIDLPEVVSVIQRMAVNQLDQPVHRQNWYDGI 62
Query: 53 VGDPEQQFSPLHPLLDWLHYN-GFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAF--EQ 109
S H L G Q+ A E+ + R+ K+ +D L D
Sbjct: 63 PD------SGPHRYQRALRSEPGVQLRAGQLIEWGD---RRTQKA-VDTRLVADMVKASL 112
Query: 110 SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
+ +++ SGD V +V + SM+S LR D
Sbjct: 113 TGTCSDIILVSGDADMIPGVEEAVDAGVRVHLYGF--GWDSMSS-NLRFACD 161
>gi|227541425|ref|ZP_03971474.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
ATCC 51866]
gi|227182813|gb|EEI63785.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
ATCC 51866]
Length = 448
Score = 55.9 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/171 (19%), Positives = 57/171 (33%), Gaps = 27/171 (15%)
Query: 6 EKIALFIDGANL---YA----SSKALGFDIDYRKLLKAFRS------RAIVIRAYYYTTV 52
E+ +F+D + L + + +ID +++ + + R +Y
Sbjct: 3 ERTMVFVDTSYLLASFYNSWETGARAQLEIDLPEVVAQLKGMIEDQLGQPIHRQMWY--- 59
Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG 112
G P+ H L NG Q+ E+ G +R + ++D L D
Sbjct: 60 DGIPDSGPHRYHRALRAC--NGVQLRVGQLIEW----GERRTQKAVDTRLVADLVLAGVH 113
Query: 113 --LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
V+ SGD V +V + SM+S LR D
Sbjct: 114 QTCSDAVLVSGDADMIPGVNEATNSGVRVHLYGF--GWDSMSS-ALRHACD 161
>gi|296446572|ref|ZP_06888514.1| protein of unknown function DUF88 [Methylosinus trichosporium OB3b]
gi|296255926|gb|EFH03011.1| protein of unknown function DUF88 [Methylosinus trichosporium OB3b]
Length = 272
Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 37/90 (41%), Gaps = 9/90 (10%)
Query: 75 FQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAAL 132
+ V A+ + R + +DV+LAVDA + + +GD F LV+AL
Sbjct: 88 YHVRTGEARHRRK---RGNEQKMVDVQLAVDALSMASRGLFTSCTLITGDLDFKPLVSAL 144
Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADY 162
VT+ L +D L+ AD
Sbjct: 145 VDMGVDVTL----LFPDDETNDDLKAAADQ 170
>gi|38234817|ref|NP_940584.1| hypothetical protein DIP2281 [Corynebacterium diphtheriae NCTC
13129]
gi|38201081|emb|CAE50805.1| Conserved hypothetical protein [Corynebacterium diphtheriae]
Length = 458
Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 35/172 (20%), Positives = 62/172 (36%), Gaps = 29/172 (16%)
Query: 6 EKIALFIDGANL---YASSKALG----FDIDYRKLLKAFRS------RAIVIRAYYYTTV 52
E+ +F+D + L + +S +G +ID +++ + V R ++Y +
Sbjct: 3 ERTQVFVDTSYLLASFYNSWEIGARAQLEIDLPEVVATLGNMIHNQLGQPVHRQFWYDGI 62
Query: 53 VGDPEQQFSPLHPLLDWLHY-NGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE 111
S H L +G Q+ A E+ G +R + ++D L D
Sbjct: 63 PE------SGPHRYQRALRTCDGVQLRAGQLIEW----GERRTQKAVDTRLVADMVLAGV 112
Query: 112 G--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
+V+ SGD V +V + SM+S LR D
Sbjct: 113 RREFTDIVLVSGDADMIPGVQEAVNAGVRVHLYGF--GWDSMSS-ALRHACD 161
>gi|300933975|ref|ZP_07149231.1| hypothetical protein CresD4_07892 [Corynebacterium resistens DSM
45100]
Length = 482
Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 64/171 (37%), Gaps = 27/171 (15%)
Query: 6 EKIALFIDGANL---YASSKALG----FDIDYRKLLKAFRS------RAIVIRAYYYTTV 52
E+ +++D + L + ++ G +ID +++ + + V R ++Y +
Sbjct: 3 ERTQVYVDTSYLLASFYNAWETGARAQLEIDLPEVVSVLSTMVQNQLKQPVHRQFWYDGI 62
Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS-- 110
+ ++ G Q+ A E+ + R+ K+ +D L D +
Sbjct: 63 PENGPHRYQRSLR-----SEPGVQLRAGQLIEWGD---RRTQKA-VDTRLVADMVIAAMK 113
Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
+ +V+ SGD V +V + SM S+QLR D
Sbjct: 114 GQVSDIVLVSGDADMLPGVEEAVAAGIRVHLYGF--GWDSM-SNQLRYACD 161
>gi|229496814|ref|ZP_04390524.1| cold shock protein [Porphyromonas endodontalis ATCC 35406]
gi|229316269|gb|EEN82192.1| cold shock protein [Porphyromonas endodontalis ATCC 35406]
Length = 298
Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 38/201 (18%), Positives = 71/201 (35%), Gaps = 35/201 (17%)
Query: 7 KIALFIDGANLYASSKALGF-DIDYRKL----LKAFRSR------------AIVIRAYYY 49
+I +F DG S + +L L F ++ A+Y+
Sbjct: 9 RIGVFYDGNYFLHVSNYYNYSHERKNRLSIAGLHHFIKNQVAQQESTDERLCQIVDAHYF 68
Query: 50 TTVVGDPEQQFSPL-----HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAV 104
+ E + + D L G + G + + +DV LA+
Sbjct: 69 RGRLTANEAKATGQTLYYDRLFDDILSSEGVTTHYLPLR---SKQGGGKQEKGIDVWLAL 125
Query: 105 DAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS-----TVLSDPSM---ASD 154
+AFEQ+ + LV+ + DG + L+ L +V ++S T + SM S
Sbjct: 126 EAFEQAFYKRFNVLVLIACDGDYVPLIRKLNALGTRVMVLSWDFEYTNDNGKSMTTRTSQ 185
Query: 155 QLRRQADYFMDLAYLKNEIAR 175
+L + Y + + + + R
Sbjct: 186 ELLEEVTYPIAMHEIIDNRVR 206
>gi|227487719|ref|ZP_03918035.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
ATCC 51867]
gi|227092340|gb|EEI27652.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
ATCC 51867]
Length = 448
Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/171 (19%), Positives = 57/171 (33%), Gaps = 27/171 (15%)
Query: 6 EKIALFIDGANL---YA----SSKALGFDIDYRKLLKAFRS------RAIVIRAYYYTTV 52
E+ +F+D + L + + +ID +++ + + R +Y
Sbjct: 3 ERTMVFVDTSYLLASFYNSWETGARAQLEIDLPEVVAQLKGMIEDQLGQPIHRQMWY--- 59
Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG 112
G P+ H L NG Q+ E+ G +R + ++D L D
Sbjct: 60 DGIPDSGPHRYHRALRAC--NGVQLRVGQLIEW----GERRTQKAVDTRLVADLVLAGVH 113
Query: 113 --LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
V+ SGD V +V + SM+S LR D
Sbjct: 114 QTCSDAVLVSGDADMIPGVNEATNSGVRVHLYGF--GWDSMSS-ALRHACD 161
>gi|159042661|ref|YP_001531455.1| hypothetical protein Dshi_0105 [Dinoroseobacter shibae DFL 12]
gi|157910421|gb|ABV91854.1| conserved hypothetical protein [Dinoroseobacter shibae DFL 12]
Length = 236
Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 36/85 (42%), Gaps = 7/85 (8%)
Query: 87 ENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVST 144
++ K++ D+ L +DA + + V+ S D FT+L L+ K+V +
Sbjct: 66 QDTANTTGKNASDIGLVIDAMDILHGGRFDGFVLVSSDSDFTSLANRLREDGKEVIGIGE 125
Query: 145 VLSDPSMASDQLRRQADYFMDLAYL 169
+ + LR + F+ + +
Sbjct: 126 KKAP-----ESLRNVCNRFIFIENI 145
>gi|296129138|ref|YP_003636388.1| protein of unknown function DUF88 [Cellulomonas flavigena DSM
20109]
gi|296020953|gb|ADG74189.1| protein of unknown function DUF88 [Cellulomonas flavigena DSM
20109]
Length = 474
Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 42/182 (23%), Positives = 66/182 (36%), Gaps = 27/182 (14%)
Query: 7 KIALFIDGANLYASSKALG------FDIDYRKLLKAFRSRAIV---IRAYYYTTVVGDPE 57
+ ALF+D N+Y L F D L + V + +
Sbjct: 12 RSALFVDFDNVYIGLARLDPRAAEAFATDPGHWLSELGQGSDVDGDLTRRFLVRACYLNP 71
Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVEL---AVDAFEQSEGLE 114
+S P GFQVV ++ KSS D+ L AVDA +
Sbjct: 72 SVYSRFRP---NFTRAGFQVVDCP-------SLTQQGKSSADINLVLDAVDALAAPTRYD 121
Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
VI S D FT L + ++VTI++ + P+ ++ R AD + L + +
Sbjct: 122 EFVIVSADADFTPLAQRCRADDRRVTIIT---ASPAASAY--RSVADTVIGADALADLVT 176
Query: 175 RD 176
+
Sbjct: 177 QT 178
>gi|257053809|ref|YP_003131642.1| protein of unknown function DUF88 [Halorhabdus utahensis DSM 12940]
gi|256692572|gb|ACV12909.1| protein of unknown function DUF88 [Halorhabdus utahensis DSM 12940]
Length = 148
Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 35/162 (21%), Positives = 51/162 (31%), Gaps = 31/162 (19%)
Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
+ L++DG N+ FD+D L + A Y L+
Sbjct: 15 VGLYVDGPNV----LREEFDVDLDDLRAIATEYGRIGAARLYL--------DEHATPGLI 62
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCF 125
GF VV +DV+LAVDA + +E LVI S D F
Sbjct: 63 QAGEARGFAVVT--------------TSGDVDVKLAVDATRAASEARIETLVIASRDTDF 108
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
+ + + V+ + SD L A L
Sbjct: 109 KPALEVAADRGCRT--VAIAPGEHGR-SDALSNTAHESHSLE 147
>gi|217968493|ref|YP_002353727.1| hypothetical protein Tmz1t_0028 [Thauera sp. MZ1T]
gi|217505820|gb|ACK52831.1| protein of unknown function DUF88 [Thauera sp. MZ1T]
Length = 509
Score = 55.5 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/179 (17%), Positives = 65/179 (36%), Gaps = 35/179 (19%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF------ 60
K ALF+D N+Y+ + L I F + + ++ + + P+
Sbjct: 2 KSALFVDFDNVYSGLRKLDQAI-----ADRFARQP-LEWMHWIISKLELPDHSPEGARRR 55
Query: 61 ----------SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELA---VDAF 107
+ GF+++ A K+S D+ + +D
Sbjct: 56 VLVRRCYLNPQAYQRFRPSFNLAGFEIIDCPAL-------TSEGKTSTDIHMVLDIIDLL 108
Query: 108 EQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTI--VSTVLSDPSMASDQLRRQADYFM 164
+ + ++FS D FT ++ L+R ++ T+ + + ++D L Q D F+
Sbjct: 109 QHETHYDEFIVFSADADFTPVLRKLRRWDRRTTVLAIGFPSAAYRASADLLIDQ-DEFV 166
>gi|258544860|ref|ZP_05705094.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826]
gi|258519883|gb|EEV88742.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826]
Length = 329
Score = 55.1 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 39/98 (39%), Gaps = 7/98 (7%)
Query: 77 VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQR 134
V+ K A + K + D+ L +DA E S + + S D FT L ++
Sbjct: 57 VLLKHALVPVQQFAYTTGKDATDMCLIIDAMELLYSGIFDGFCLVSSDSDFTPLANHIRS 116
Query: 135 KVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
+ +T+ + R+ D F+ L L++E
Sbjct: 117 RG--LTVYGF---GKRNTPEAFRQSCDRFIYLENLQDE 149
>gi|254439173|ref|ZP_05052667.1| conserved hypothetical protein [Octadecabacter antarcticus 307]
gi|198254619|gb|EDY78933.1| conserved hypothetical protein [Octadecabacter antarcticus 307]
Length = 233
Score = 55.1 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 39/99 (39%), Gaps = 7/99 (7%)
Query: 76 QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQ 133
+V+ ++ + + K++ D+ L +DA + + VI S D FT L L+
Sbjct: 54 EVIPELGLVARQETANTKQKNASDIGLVIDAMDILHGGKFDGFVIVSSDSDFTGLANRLR 113
Query: 134 RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
+ V + LR + F+ + L N+
Sbjct: 114 EDGRTVIGIGEAK-----TPQSLRNVCNRFIFIENLIND 147
>gi|289705143|ref|ZP_06501547.1| conserved hypothetical protein [Micrococcus luteus SK58]
gi|289558171|gb|EFD51458.1| conserved hypothetical protein [Micrococcus luteus SK58]
Length = 360
Score = 55.1 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 43/112 (38%), Gaps = 8/112 (7%)
Query: 73 NGFQ-VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLV 129
NG++ + A + + K+S D L +DA + ++ + S D FT L
Sbjct: 53 NGWKKALNHHAIQPVQQFAYTVGKNSSDSALIIDAMDLLWMGNVDAFALVSSDSDFTRLA 112
Query: 130 AALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
L+ K+V + LR D F+ L L D D+D+
Sbjct: 113 TRLREGGKRVIGLGARK-----TPASLRNAVDQFIYLELLGTATDHDVDDDE 159
>gi|294084800|ref|YP_003551560.1| hypothetical protein SAR116_1233 [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292664375|gb|ADE39476.1| hypothetical protein SAR116_1233 [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 267
Score = 55.1 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Query: 95 KSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMA-- 152
+ ++DV L++ ++ + +I SGD + V ++ K V VS D +
Sbjct: 175 EKTVDVNLSLGMVLKAPIYDTAIIVSGDQDYVPAVQQVKNLGKHVINVSFQKIDGGLLPG 234
Query: 153 -SDQLRRQAD 161
+ +L D
Sbjct: 235 GARKLNEVTD 244
>gi|317011853|gb|ADU85599.1| hypothetical protein HPSA_08374 [Helicobacter pylori SouthAfrica7]
Length = 193
Score = 55.1 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 36/185 (19%), Positives = 65/185 (35%), Gaps = 30/185 (16%)
Query: 3 DPREKIALFIDGANL-----YASSKALGFDIDYR----KL-----LKAFRSRAI-----V 43
+ +K A+F+D NL + K DY K+ L F S +
Sbjct: 2 NHTQKTAIFVDFENLRIGVFNKTWKKKRLFFDYNNNPQKVVDFCNLCVFDSYHDKDLLNL 61
Query: 44 IRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVA--KVAKEFTENCGRKRVKSSMDVE 101
R ++YT D + + L L + K+ K G V+ +D+
Sbjct: 62 YRIFFYTAKPLDSHSKKEDILKFLSTLECLNHTALRLGKLVKR-----GDVEVQKQVDML 116
Query: 102 LAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQ 159
L +D E S +E +V+ D + + + + I+ + + S L +
Sbjct: 117 LGIDMLEISLKHFVEKVVLIGYDSDMSPALKLARTNGIQTEIILFEDLEQKIES-SLTKH 175
Query: 160 ADYFM 164
D F+
Sbjct: 176 CD-FI 179
>gi|84500442|ref|ZP_00998691.1| hypothetical protein OB2597_10806 [Oceanicola batsensis HTCC2597]
gi|84391395|gb|EAQ03727.1| hypothetical protein OB2597_10806 [Oceanicola batsensis HTCC2597]
Length = 236
Score = 55.1 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 35/88 (39%), Gaps = 7/88 (7%)
Query: 87 ENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVST 144
+ + K++ D+ L +DA + + V+ S D FT L ++ + V +
Sbjct: 65 QETANTKGKNASDIGLVIDAMDILHTGRFDGFVLVSSDSDFTALANRVREQGLDVIGIGE 124
Query: 145 VLSDPSMASDQLRRQADYFMDLAYLKNE 172
+ + LR + F+ + + E
Sbjct: 125 SKAP-----ESLRNVCNRFILIENIVEE 147
>gi|297192241|ref|ZP_06909639.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
25486]
gi|297151272|gb|EDY63689.2| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
25486]
Length = 312
Score = 55.1 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 62/188 (32%), Gaps = 31/188 (16%)
Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53
A+F+D +YA++ L FD+D L++AF +A ++R Y+Y
Sbjct: 48 AIFVDAGYVYAAAGLLVAGTEDRRSFDLDAEGLIEAFIDKARTIFADSRLLRVYWY---- 103
Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
+ + K N + +D + D +
Sbjct: 104 --DGARRRIHTSEQQAIAELP------DVKVRLGNLNANNQQKGVDSLIRTDLESLARHR 155
Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169
+ + GD + V A Q +V + + ++ L + D DL +
Sbjct: 156 AISDAALVGGDEDLVSAVEAAQGYGARVHLWGIEAGEGRNQAEPLLWEVDSQRTFDLDFC 215
Query: 170 KNEIARDP 177
+ I R P
Sbjct: 216 RPYITRRP 223
>gi|302521778|ref|ZP_07274120.1| conserved hypothetical protein [Streptomyces sp. SPB78]
gi|318062102|ref|ZP_07980823.1| hypothetical protein SSA3_29472 [Streptomyces sp. SA3_actG]
gi|302430673|gb|EFL02489.1| conserved hypothetical protein [Streptomyces sp. SPB78]
Length = 310
Score = 55.1 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 40/193 (20%), Positives = 66/193 (34%), Gaps = 44/193 (22%)
Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRS-------RAIVIRAYYYTTVV 53
A+F+D LYA++ L GF++D + L+ A + ++R Y+Y
Sbjct: 33 AIFVDAGYLYAAAGRLVTGTEDRKGFELDAQGLIDALVDCASHVFPHSRLLRVYWY---D 89
Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
G + + + L K N + +D + D +
Sbjct: 90 GARRRIHTAEQQSIAELP---------DVKVRLGNLNANNQQKGVDSLIRGDLESLARHR 140
Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD---------Y 162
+ V+ GD V A Q +V + + LR QAD
Sbjct: 141 AIGDAVLLGGDEDLVPAVEAAQDFGARVHLWGIEAPEG------LRNQADPLLWEVDTQR 194
Query: 163 FMDLAYLKNEIAR 175
+DLA+LK AR
Sbjct: 195 TLDLAFLKPYAAR 207
>gi|260574189|ref|ZP_05842194.1| protein of unknown function DUF88 [Rhodobacter sp. SW2]
gi|259023655|gb|EEW26946.1| protein of unknown function DUF88 [Rhodobacter sp. SW2]
Length = 246
Score = 55.1 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 64/165 (38%), Gaps = 37/165 (22%)
Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+++A+ IDG NL A + I+ ++ + + ++ +
Sbjct: 15 KTQRVAVMIDGENL-----------------SAGLAGQIITKSLAFGRLTI--KRVYGNA 55
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSG 121
L W GF+++ K++ D+ L ++A E ++ LVI S
Sbjct: 56 IRLTQWEAAPGFRLI-----------HSGNGKNATDLLLCIEAMELVHSGLVDTLVIASS 104
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
D F+ L A L K ++V + ASD R+ F++L
Sbjct: 105 DRDFSHLAAHLCEKGQQVIGMGEAK-----ASDAFRKACTRFIEL 144
>gi|103487486|ref|YP_617047.1| hypothetical protein Sala_2003 [Sphingopyxis alaskensis RB2256]
gi|98977563|gb|ABF53714.1| hypothetical protein Sala_2003 [Sphingopyxis alaskensis RB2256]
Length = 213
Score = 54.7 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/146 (16%), Positives = 50/146 (34%), Gaps = 19/146 (13%)
Query: 7 KIALFIDGANLYASSK-ALGF---DIDYRKLLKAFRSRA--IVIRAYYYTTVVGDPEQQF 60
+ F DG NL+ S+K A G+ + D L + + + +YT V ++ F
Sbjct: 13 RAVAFFDGQNLFHSAKQAFGYSWPNFDPTLLAERVCQDHGWQLQQTRFYTGVPDAADKPF 72
Query: 61 --SPLHPLLDWLHYNGFQVVAKVAK------EFTENCGRKRVKSS---MDVELAVDAFEQ 109
+ G V + + + + +DV +A+D
Sbjct: 73 WNHFWVAKAAQMARQGVHVFTRSLRYRNKKVRLPDGTEHSFLDGDEKGIDVRIALDVIRL 132
Query: 110 S--EGLEHLVIFSGDGCFTTLVAALQ 133
+ + ++F D T + ++
Sbjct: 133 ALKREFDVAILFCRDQDLTEVADEIR 158
>gi|297563529|ref|YP_003682503.1| hypothetical protein Ndas_4611 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296847977|gb|ADH69997.1| protein of unknown function DUF88 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 574
Score = 54.7 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 34/190 (17%), Positives = 69/190 (36%), Gaps = 37/190 (19%)
Query: 5 REKIALFIDGANL-------YASSK---ALGFDIDYRKLLKAF------RSRAIVIRAYY 48
++ ALF+D L ++ ++ + DY L++ R+ ++R Y+
Sbjct: 1 MDRCALFVDAGYLLADGAMAVHGTRNRDSVSW--DYTGLVQFLNEVARDRTGLPLLRCYW 58
Query: 49 YTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE 108
Y V D Q + + + G + + +R D
Sbjct: 59 YEAVADDRRTQEQDGIADIPGIKFRG--ARIRPGRREGVESYVQR-----------DLTT 105
Query: 109 QSEG---LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165
+ + V+ SGD +VA +Q +VT+V + S LRR+ D ++
Sbjct: 106 LARTGVLCD-AVLVSGDEDMAPVVADVQDMGVRVTVVHVSVEGNWTISRALRRECDDLIE 164
Query: 166 L--AYLKNEI 173
+ +L+ +
Sbjct: 165 IGAGHLRPHV 174
>gi|332158255|ref|YP_004423534.1| hypothetical protein PNA2_0614 [Pyrococcus sp. NA2]
gi|331033718|gb|AEC51530.1| hypothetical protein PNA2_0614 [Pyrococcus sp. NA2]
Length = 165
Score = 54.7 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 35/173 (20%), Positives = 64/173 (36%), Gaps = 36/173 (20%)
Query: 4 PREKIALFIDGANLYASSKALGFDI-DYRKLLKAFRS-RAIVIRAYYYTTVVGDPEQQFS 61
P++ I L IDG N+ K G + D +K L+ R + Y
Sbjct: 22 PQKTIGLIIDGPNILR--KEFGIKLEDIKKALERIGKIRVAKVVLNQYAP---------- 69
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIF 119
L++ + GF+ + V DV +A++A E ++ + +
Sbjct: 70 --QGLIEAVVNQGFEPII--------------VAGDTDVRVAIEAMELIYNANVDVIALA 113
Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
+ D F L++ +RK K+ ++ S L+ ADY + + E
Sbjct: 114 TRDADFLPLISEAKRKGKETVVIGVEPGF----SVALQNAADYIIKMEKKAEE 162
>gi|239918004|ref|YP_002957562.1| conserved hypothetical protein TIGR00288 [Micrococcus luteus NCTC
2665]
gi|281415820|ref|ZP_06247562.1| hypothetical protein MlutN2_11509 [Micrococcus luteus NCTC 2665]
gi|239839211|gb|ACS31008.1| conserved hypothetical protein TIGR00288 [Micrococcus luteus NCTC
2665]
Length = 371
Score = 54.7 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 44/112 (39%), Gaps = 8/112 (7%)
Query: 73 NGFQ-VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLV 129
NG++ + A + + K+S D L +DA + ++ + S D FT L
Sbjct: 53 NGWKKALNHHAIQPVQQFAYTVGKNSSDSALIIDAMDLLWMGNVDAFALVSSDSDFTRLA 112
Query: 130 AALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
L+ K+V + LR D F+ L L +D D+D+
Sbjct: 113 TRLREGGKRVIGLGARK-----TPASLRNAVDQFIYLELLGTATDQDVDDDE 159
>gi|220935117|ref|YP_002514016.1| hypothetical protein Tgr7_1948 [Thioalkalivibrio sp. HL-EbGR7]
gi|219996427|gb|ACL73029.1| hypothetical protein Tgr7_1948 [Thioalkalivibrio sp. HL-EbGR7]
Length = 199
Score = 54.7 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/151 (18%), Positives = 55/151 (36%), Gaps = 26/151 (17%)
Query: 5 REKIALFIDGANLY----ASSKALGFDIDYRKLLKAFRSRA----IVIRAYYYTTVVGDP 56
+ + +F+D NL+ S ++ G+ +D+ +LL A A +++ Y V+ D
Sbjct: 28 NDSVHVFVDDQNLFWGVLNSGQSRGYRVDFGRLLTAASRDASGKTRFVKSAYIAGVIPDD 87
Query: 57 EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEH- 115
+ GF V + + G + D L + S EH
Sbjct: 88 D-------SFWKIAENQGFTVR----RGYLSGAGGGQRSKQDDAYLITEI--TSTLYEHQ 134
Query: 116 ----LVIFSGDGCFTTLVAALQRKVKKVTIV 142
+V+ +GD + + K +V +
Sbjct: 135 GPSTIVLVAGDADYVPPLIRANEKGWRVEVA 165
>gi|78189938|ref|YP_380276.1| cold shock protein [Chlorobium chlorochromatii CaD3]
gi|78172137|gb|ABB29233.1| Cold shock protein [Chlorobium chlorochromatii CaD3]
Length = 310
Score = 54.7 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 33/173 (19%), Positives = 61/173 (35%), Gaps = 35/173 (20%)
Query: 1 MFDPRE----KIALFIDGANLYASSKALGFDIDYRK------------LLKAFRSR---- 40
M + R+ +I +F DG S + + + + +
Sbjct: 1 MVNNRDLSLTRIGVFYDGNYFLHISNYYNYF--HERKARISISGLHHFVRNYIAQQEGSD 58
Query: 41 ---AIVIRAYYYTTVVGDPEQQFSP-----LHPLLDWLHYNGFQVVAKVAKEFTENCGRK 92
++ A+Y+ + E D L G K T G +
Sbjct: 59 EQLCQIVDAHYFRGRLNAYEAAQEGNALFYDRLFDDILSSEGVTTHYLPVK--TSQTGVR 116
Query: 93 RVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS 143
K +DV LA++AFEQ+ + + LV+ + DG + L+ L +V ++S
Sbjct: 117 YEKG-IDVWLALEAFEQAFYKRFDVLVLIASDGDYVPLIRKLNTLGTRVMVLS 168
>gi|296268176|ref|YP_003650808.1| hypothetical protein Tbis_0183 [Thermobispora bispora DSM 43833]
gi|296090963|gb|ADG86915.1| protein of unknown function DUF88 [Thermobispora bispora DSM 43833]
Length = 468
Score = 54.7 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 33/178 (18%), Positives = 69/178 (38%), Gaps = 31/178 (17%)
Query: 5 REKIALFIDGANL-------YASSK---ALGFD----IDYRKLLKAFRSRAIVIRAYYYT 50
++ ALF+D L ++ A+ +D + + L R+ ++R Y+Y
Sbjct: 1 MDRCALFVDAGYLLADGARAVHGTRQREAVSWDLPGLVRFLGKLSRDRTGLPLLRCYWYE 60
Query: 51 TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110
V + +P H +L + G ++ + GR+ MD ++ D +
Sbjct: 61 ATVEG---RRTPEHDVLADIP--GIKLRLSRIRP-----GRRE---GMDAQVHRDLMTLA 107
Query: 111 EG---LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165
+ V+ SGD ++ Q +VT+V ++ LR++ D ++
Sbjct: 108 RNNAICD-AVVVSGDEDLVQVICDAQDLGIRVTVVQIAGESGWSSARALRQECDDLIE 164
>gi|300780231|ref|ZP_07090087.1| conserved hypothetical protein [Corynebacterium genitalium ATCC
33030]
gi|300534341|gb|EFK55400.1| conserved hypothetical protein [Corynebacterium genitalium ATCC
33030]
Length = 402
Score = 54.7 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 30/172 (17%), Positives = 57/172 (33%), Gaps = 29/172 (16%)
Query: 6 EKIALFIDGANL---YA----SSKALGFDIDYRKLLKAFRS------RAIVIRAYYYTTV 52
E+ +F+D + L + + +ID +++ + + R ++Y +
Sbjct: 3 ERTVVFVDTSYLLASFYNSWETGARSQLEIDLPEVVANLGTMITQQLHQPIHRQFWYDGI 62
Query: 53 VGDPEQQFSPLHPLLDWLHY-NGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS- 110
S H L +G Q+ E+ G +R + +D L D +
Sbjct: 63 PD------SGPHRYQRALRTCDGVQLRTGQLIEW----GERRTQKGVDTRLVADIVANAM 112
Query: 111 -EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
V+ SGD V ++ + SM+S LR D
Sbjct: 113 RGQYSDFVLVSGDADMIPGVEEATNAGVRMHLYGF--GWDSMSS-ALRHACD 161
>gi|227548518|ref|ZP_03978567.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM
44291]
gi|227079347|gb|EEI17310.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM
44291]
Length = 404
Score = 54.7 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 34/172 (19%), Positives = 59/172 (34%), Gaps = 29/172 (16%)
Query: 6 EKIALFIDGANL---YASSKALGF----DIDYRKLLKAFRS------RAIVIRAYYYTTV 52
E+ +F+D + L + +S +G +ID +++ + + R Y+Y +
Sbjct: 3 ERTLVFVDTSYLLASFYNSWEIGARAQLEIDLPEVVSTLGAMITHQLHQPIHRQYWYDGI 62
Query: 53 VGDPEQQFSPLHPLLDWLHY-NGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE 111
S H L +G Q+ E+ G +R + +D L D +
Sbjct: 63 PD------SGPHRYQRALRTCDGVQLRTGQLIEW----GERRTQKGVDTRLVADLVVNAS 112
Query: 112 G--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
V+ SGD V +V + SM S LR D
Sbjct: 113 RQQFTDFVLLSGDADMIPGVEEATGFGVRVHLYGF--GWDSM-STALRHSCD 161
>gi|318080774|ref|ZP_07988106.1| hypothetical protein SSA3_29788 [Streptomyces sp. SA3_actF]
Length = 302
Score = 54.7 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 40/193 (20%), Positives = 66/193 (34%), Gaps = 44/193 (22%)
Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRS-------RAIVIRAYYYTTVV 53
A+F+D LYA++ L GF++D + L+ A + ++R Y+Y
Sbjct: 33 AIFVDAGYLYAAAGRLVTGTEDRKGFELDAQGLIDALVDCASHVFPHSRLLRVYWY---D 89
Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
G + + + L K N + +D + D +
Sbjct: 90 GARRRIHTAEQQSIAELP---------DVKVRLGNLNANNQQKGVDSLIRGDLESLARHR 140
Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD---------Y 162
+ V+ GD V A Q +V + + LR QAD
Sbjct: 141 AIGDAVLLGGDEDLVPAVEAAQDFGARVHLWGIEAPEG------LRNQADPLLWEVDTQR 194
Query: 163 FMDLAYLKNEIAR 175
+DLA+LK AR
Sbjct: 195 TLDLAFLKPYAAR 207
>gi|34496201|ref|NP_900416.1| hypothetical protein CV_0746 [Chromobacterium violaceum ATCC 12472]
gi|34102055|gb|AAQ58422.1| hypothetical protein CV_0746 [Chromobacterium violaceum ATCC 12472]
Length = 180
Score = 54.4 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 31/193 (16%), Positives = 64/193 (33%), Gaps = 48/193 (24%)
Query: 10 LFIDGANLYASSKAL----------------------GFDIDYRKLLKAFRSR--AIVIR 45
++ID +NLY + + G+ I + KL + + R
Sbjct: 5 IYIDNSNLYIEGRRVSAVQQRLATNINEAMRDGILDHGYTISFGKLHEFLTGGDLTKIKR 64
Query: 46 AYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAV- 104
A Y + + + GF++ E+ + +D +A
Sbjct: 65 AALYGSRPPPNDSIWKSAE-------RAGFEL-------HLEDRNVANKEKKIDTGIATL 110
Query: 105 ---DAFEQ-SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160
DA++ + V+ +GD + + L+ +V +V S A+ +L+ A
Sbjct: 111 LTKDAYKHGKPEEDLFVLVAGDKDYVPTLNELRADGYQVEVV-----FWSHAAKELKDAA 165
Query: 161 DYFMDLAYLKNEI 173
F+ L +
Sbjct: 166 TRFISLDQHLEHL 178
>gi|332974970|gb|EGK11880.1| hypothetical protein HMPREF9374_1743 [Desmospora sp. 8437]
Length = 273
Score = 54.4 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 36/175 (20%), Positives = 67/175 (38%), Gaps = 25/175 (14%)
Query: 4 PREKIALFIDGANLYASSKALGFDID--------YRKLLKAFRSRAIVIRAYYYTTVVGD 55
+ I+++ID N+Y K + D + +L + + I + Y
Sbjct: 3 KDKSISIWIDLENVYYGLKKYHMNPDHPDPKHNLFLRLQEHYGRHKIRMMGVY------G 56
Query: 56 PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE---QSEG 112
+Q P + L + + + G + K++ D++L +DA +
Sbjct: 57 DFEQLGPDISMNQLLKKH-----VHIHQVHGNGRGEEERKNAADIQLCLDAMDVLHTVSE 111
Query: 113 LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASD-QLRRQADYFMDL 166
+E VI S D L+ L + K+V + L D S++ D L D F +L
Sbjct: 112 VETFVIVSADQDMIPLMDRLWSRGKRVEL--FCLQDESLSRDAHLEAFCDEFYNL 164
>gi|328948943|ref|YP_004366280.1| hypothetical protein Tresu_2114 [Treponema succinifaciens DSM 2489]
gi|328449267|gb|AEB14983.1| Domain of unknown function DUF88 [Treponema succinifaciens DSM
2489]
Length = 311
Score = 54.4 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 52/137 (37%), Gaps = 21/137 (15%)
Query: 52 VVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGR-KRVKSSMDVELAVD---AF 107
+G + L GFQ + + GR +K AVD F
Sbjct: 64 FMGTNAEFDRENQKFYRALDEAGFQRNTFNLRSQESSNGRLPTLKED-----AVDTTIVF 118
Query: 108 EQS---------EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDP---SMASDQ 155
+ E + LV+++GDG + LV+ L+ + +V ++ P + AS
Sbjct: 119 NTAKEFYTKSRDERFDTLVLYAGDGDLSVLVSGLKAEGVRVFVIYYDFKTPVSITRASQN 178
Query: 156 LRRQADYFMDLAYLKNE 172
L AD + ++ L +E
Sbjct: 179 LLETADKAISISSLLDE 195
>gi|333024585|ref|ZP_08452649.1| hypothetical protein STTU_2089 [Streptomyces sp. Tu6071]
gi|332744437|gb|EGJ74878.1| hypothetical protein STTU_2089 [Streptomyces sp. Tu6071]
Length = 310
Score = 54.4 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 57/170 (33%), Gaps = 35/170 (20%)
Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRS-------RAIVIRAYYYTTVV 53
A+F+D LYA++ L GF++D + L+ A + ++R Y+Y
Sbjct: 33 AIFVDAGYLYAAAGRLVTGTEDRKGFELDAQGLIDALVDCASHVFPHSRLLRVYWY---D 89
Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
G + + + L K N + +D + D +
Sbjct: 90 GARRRIHTAEQQSIAELP---------DVKVRLGNLNANNQQKGVDSLIRGDLESLARHR 140
Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
+ V+ GD V A Q +V + + LR QAD
Sbjct: 141 AIGDAVLLGGDEDLVPAVEAAQDFGARVHLWGIEAPEG------LRNQAD 184
>gi|83591783|ref|YP_425535.1| hypothetical protein Rru_A0443 [Rhodospirillum rubrum ATCC 11170]
gi|83574697|gb|ABC21248.1| hypothetical protein Rru_A0443 [Rhodospirillum rubrum ATCC 11170]
Length = 216
Score = 54.4 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 14/72 (19%), Positives = 26/72 (36%), Gaps = 4/72 (5%)
Query: 75 FQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAAL 132
++V+ K + N R + +D + D + + V+ S D F + L
Sbjct: 120 YKVIGKC--PYCGNDMRGTEEKGVDTAIVTDMISLAWENAFDIAVLVSADRDFVPVAEYL 177
Query: 133 QRKVKKVTIVST 144
K KV +
Sbjct: 178 HTKGIKVIHAAF 189
>gi|260914714|ref|ZP_05921179.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
gi|260631218|gb|EEX49404.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
Length = 261
Score = 54.4 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 30/177 (16%), Positives = 59/177 (33%), Gaps = 29/177 (16%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
+ +++A+ ID N AS++ D + +L+ Y V Q
Sbjct: 13 ESTKRLAVLIDADN--ASAR------DIKAILEEVTKYGEATVKRIYGNFVSTNGQWKET 64
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
++ K ++F G+ M ++ A+D + + I S D
Sbjct: 65 INQY-----------AIKPMQQFAFTTGKNATDGFMIID-AMDLL-YTNRFDGFCIVSSD 111
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
FT L L+ T+ +A R F+ + L ++ +P +
Sbjct: 112 SDFTALAIRLKEHGA--TVYGFGKKQTPLA---FRNACSRFIYVENLHDD---EPSQ 160
>gi|213965345|ref|ZP_03393541.1| conserved hypothetical protein [Corynebacterium amycolatum SK46]
gi|213951961|gb|EEB63347.1| conserved hypothetical protein [Corynebacterium amycolatum SK46]
Length = 227
Score = 54.4 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 47/121 (38%), Gaps = 25/121 (20%)
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG-LEH-----LV 117
P ++ L GF V AK +++ DV+ D + + +V
Sbjct: 90 RPWVEALRNVGFAVFAKP-----------KIEEDTDVD--PDMIAHIQRRYDEGVLRSVV 136
Query: 118 IFSGDG-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
+ S DG F L+ L + +VT++ AS L A F+DL +K R+
Sbjct: 137 VASADGQNFQELLEKLASEGIRVTVIGF----HEHASWALASDAIRFVDLEEIKGVF-RE 191
Query: 177 P 177
P
Sbjct: 192 P 192
>gi|327403774|ref|YP_004344612.1| hypothetical protein Fluta_1784 [Fluviicola taffensis DSM 16823]
gi|327319282|gb|AEA43774.1| hypothetical protein Fluta_1784 [Fluviicola taffensis DSM 16823]
Length = 209
Score = 54.0 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 33/179 (18%), Positives = 61/179 (34%), Gaps = 25/179 (13%)
Query: 7 KIALFIDGANLYASSKALGFD-------IDYRKLLK----AFRSRAIVIRAYYYTTVV-- 53
K++ IDG NLY S + L + +D + LL A A + +Y+T +
Sbjct: 2 KVSFLIDGFNLYHSIEDLEKNNGIKAKWLDIKTLLHSYMGAIGGTAKFEKIFYFTALRLH 61
Query: 54 --GDPEQQFSPLHPLLDWLHYNGFQVVA---KVAKEFT---ENCGRKRVKSSMDVELAVD 105
+ + L G + + K + F + DV +A
Sbjct: 62 VQKEKPNSIERHKRYIAALETKGIEAIYGGFKPKEVFCKKCNETFETFEEKKTDVAIASK 121
Query: 106 AFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162
E + + + I SGD + ++ K+ I+ +D+L+ D
Sbjct: 122 IIELAAKAMCDVIAIVSGDTDLIPAIELAKQINPKIKIIVFFPYKR--TNDELKIYTDQ 178
>gi|229489850|ref|ZP_04383707.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
gi|229323360|gb|EEN89124.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length = 334
Score = 54.0 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 34/172 (19%), Positives = 63/172 (36%), Gaps = 32/172 (18%)
Query: 10 LFIDGANLYASS--------KALGFDIDYRKLL------KAFRSRAIVIRAYYY-TTVVG 54
L+ID L AS+ G +DY KL+ ++ ++R ++Y + G
Sbjct: 7 LYIDAGYLLASAATRVTGTSLRGGIHVDYSKLIGSLLAAAEVKAGLPMLRVHWYDSARNG 66
Query: 55 DPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG-- 112
P+ Q + L +V ++ + G + +D+ + +D +
Sbjct: 67 IPDAQQERIGELP--------KVKLRLGR-----FGVNGEQKGVDLRMGLDLVAHARNRA 113
Query: 113 LEHLVIFSGDGCFTTLVAALQRKVKKVTIVS--TVLSDPSMASDQLRRQADY 162
+ + SGD V Q +V +++ TV S L R AD
Sbjct: 114 SDVFFLVSGDDDLAEAVEEAQVHGVQVLLLAVPTVEGKAHGVSRHLIRAADE 165
>gi|11498667|ref|NP_069895.1| hypothetical protein AF1062 [Archaeoglobus fulgidus DSM 4304]
gi|2649525|gb|AAB90177.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
Length = 177
Score = 54.0 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 29/182 (15%), Positives = 65/182 (35%), Gaps = 32/182 (17%)
Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
R K+ + +DG N+ F+I+ +++ + + A +
Sbjct: 22 LSQRRKVGVLVDGPNM----LRKEFNINLKEIREILSEYGDIKIAKVFL--------NQY 69
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIF 119
L++ + GF+ + +DV +AV+A E + ++ + +
Sbjct: 70 ATEKLVEAIENQGFEPIV--------------TSGDVDVRMAVEAMELIYNDSIDAVALV 115
Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
+ D F ++ K+ I+ S L+ AD + L + + D DE
Sbjct: 116 TRDADFKAVLMKAMEMGKETIIIGAEPGF----STALKNSADIAIVLNEDEEKEKGDADE 171
Query: 180 DK 181
++
Sbjct: 172 EE 173
>gi|327401247|ref|YP_004342086.1| hypothetical protein Arcve_1367 [Archaeoglobus veneficus SNP6]
gi|327316755|gb|AEA47371.1| protein of unknown function DUF88 [Archaeoglobus veneficus SNP6]
Length = 186
Score = 54.0 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 26/168 (15%), Positives = 63/168 (37%), Gaps = 32/168 (19%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
R K+ + +DG N+ F+I+ +++ + + A +
Sbjct: 24 QDRRKVGVLVDGPNM----LRKEFNINLQEIREILSEYGDIKAAKVFL--------NQYA 71
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFS 120
L++ + GF+ + +DV +AV+A E + ++ + + +
Sbjct: 72 SEKLVEAIENQGFEPIV--------------TSGDVDVRMAVEAMEMIYNDAIDAIALVT 117
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
D F +++ K+ I+ ++P ++ L+ AD + L
Sbjct: 118 RDADFKSVLKKAMEMGKETIIIG---AEPGFSA-ALKNSADIAIVLNE 161
>gi|292656541|ref|YP_003536438.1| hypothetical protein HVO_2415 [Haloferax volcanii DS2]
gi|291370393|gb|ADE02620.1| Uncharacterized conserved protein [Haloferax volcanii DS2]
Length = 158
Score = 54.0 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 35/168 (20%), Positives = 57/168 (33%), Gaps = 32/168 (19%)
Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRS-RAIVIRAYYYTTVVGDPEQQFSP 62
P ++ALF+DG N+ FD+D + A RS + A Y
Sbjct: 14 PSGRVALFVDGPNV----LRDEFDVDLDDIRAAGRSLGGQLSAARLYL--------DEHA 61
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFS 120
L+ GF+VV +DV+LAVD + + + + + S
Sbjct: 62 TPGLIQAAEARGFEVVV--------------TSGDVDVKLAVDLTRYAVEDRADVIAVAS 107
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
D F + + ++ SD L+ A + M L
Sbjct: 108 RDTDFKPALETANAYGLRTVAIAPGSYGR---SDALQNAATHAMTLDE 152
>gi|296268684|ref|YP_003651316.1| hypothetical protein Tbis_0698 [Thermobispora bispora DSM 43833]
gi|296091471|gb|ADG87423.1| protein of unknown function DUF88 [Thermobispora bispora DSM 43833]
Length = 304
Score = 54.0 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 30/176 (17%), Positives = 60/176 (34%), Gaps = 29/176 (16%)
Query: 3 DPREKIALFIDGANLYASSKA--LG------FDIDYRKLLKAFRS-------RAIVIRAY 47
P K AL +D LYA++ LG F + +L+K+ + ++R Y
Sbjct: 10 HPTSKFALLVDVGYLYAAAGEVLLGAKERKEFRVRADELIKSLQKHAAERIPGGELLRVY 69
Query: 48 YYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAF 107
+Y + L W K N + + +D ++ D
Sbjct: 70 WYDAARDRVPTVDQRVIAQLPW------------VKVRLGNLNARGQQKGVDAQIRSDLE 117
Query: 108 EQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
+ + ++ +GD V A Q +V + + +++L ++D
Sbjct: 118 ALARHHAVSDTILIAGDEDMVPAVEAAQAYGVRVHLWGVEPPFGTNQAERLVWESD 173
>gi|312196812|ref|YP_004016873.1| hypothetical protein FraEuI1c_2978 [Frankia sp. EuI1c]
gi|311228148|gb|ADP81003.1| protein of unknown function DUF88 [Frankia sp. EuI1c]
Length = 553
Score = 54.0 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 29/185 (15%), Positives = 63/185 (34%), Gaps = 46/185 (24%)
Query: 7 KIALFIDGANLYASSKAL------GFDIDYRKLLKAFRS-----------RAIVIRAYYY 49
+ ALF+D N++ + L F ++ + L + R ++ Y Y
Sbjct: 15 RSALFVDFENIHMGLQRLDAAAANRFAVNPQCWLSWLETLAYPALGATDFRRDLLIRYCY 74
Query: 50 TTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ 109
V + GF VV K+S D+ + +D +
Sbjct: 75 LNPVSSA--------RYRAYFTRAGFHVVDCP-------PLTAAGKNSADIHIVIDVLDI 119
Query: 110 SEG---LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY---- 162
+ +++ S D +T ++ L+ ++ I+++ ++ R D+
Sbjct: 120 LGHPTRFDEVILLSADADYTPVMLRLRAHDRRTVIITS-----GPSARAFRAACDHVVGE 174
Query: 163 --FMD 165
F+D
Sbjct: 175 DAFID 179
>gi|15790568|ref|NP_280392.1| hypothetical protein VNG1608C [Halobacterium sp. NRC-1]
gi|10581082|gb|AAG19872.1| conserved hypothetical protein [Halobacterium sp. NRC-1]
Length = 187
Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/155 (21%), Positives = 54/155 (34%), Gaps = 31/155 (20%)
Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
+ALF+DG N+ FD+D + + + Y PL+
Sbjct: 52 VALFVDGPNV----LRDEFDVDLDDVREIAGEVGPLAVTRLYL--------DEHATPPLI 99
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCF 125
G+ V +DV+LAVDA E +G++ L + S D F
Sbjct: 100 QAGEARGYDVRV--------------TSGDVDVKLAVDATELVLDDGVDVLAVASRDTDF 145
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160
+ +R+ + ++ SD LR A
Sbjct: 146 KPVFEQAERRGVRTLAIAPGEHGR---SDALRNAA 177
>gi|56964892|ref|YP_176623.1| hypothetical protein ABC3128 [Bacillus clausii KSM-K16]
gi|56911135|dbj|BAD65662.1| hypothetical protein [Bacillus clausii KSM-K16]
Length = 280
Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/181 (18%), Positives = 67/181 (37%), Gaps = 37/181 (20%)
Query: 1 MFDPRE--KIALFIDGANLYASS-KALGFDIDYRK--------LL-KAFRSRAIVIRAYY 48
MF ++ +A+FID N+Y + + ++ + L + +++ RAY
Sbjct: 12 MFKTKDHNNVAIFIDYDNVYWTLMNRYNHNPNHEEQEKNLFNCLWDRYGQNQVRTFRAYA 71
Query: 49 YTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE 108
F + L L ++ ++ + K+S D+EL +DA E
Sbjct: 72 ----------DFQRIRSSLTDLQKQ----RVQIRHVYSNDKEGDSRKNSSDIELCIDAIE 117
Query: 109 QS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMA--------SDQLR 157
+ E + V + D +++ L K K+V + + P S+ LR
Sbjct: 118 STYKDENISCYVFVTADSDMVPIMSRLMYKGKRVELYYLSEAAPKHTDITNYSHYSEDLR 177
Query: 158 R 158
Sbjct: 178 D 178
>gi|217968518|ref|YP_002353752.1| hypothetical protein Tmz1t_0056 [Thauera sp. MZ1T]
gi|217505845|gb|ACK52856.1| protein of unknown function DUF88 [Thauera sp. MZ1T]
Length = 448
Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/179 (16%), Positives = 64/179 (35%), Gaps = 35/179 (19%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF------ 60
K ALF+D N+Y+ + L D + F + + + + P+
Sbjct: 2 KSALFVDFDNVYSGLRKL----DP-AIADRFARQP-LEWVNWVIGELELPDHAPAGARRR 55
Query: 61 ----------SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110
+ GF+++ A K+S D+ + +D +
Sbjct: 56 LLVRRCYLNPQAYQRFRPSFNLAGFEIIDCPAL-------TSEGKTSTDIHMVLDIIDLL 108
Query: 111 EG---LEHLVIFSGDGCFTTLVAALQRKVKKVTI--VSTVLSDPSMASDQLRRQADYFM 164
+ + ++FS D FT ++ L+R ++ T+ + + ++D L D F+
Sbjct: 109 QHEARYDEFIVFSADADFTPVLRKLRRWDRRTTVLAIGFPSAAYRASADLLIDP-DEFV 166
>gi|32455334|ref|NP_862346.1| hypothetical protein pHel5_14 [Helicobacter pylori]
gi|20502866|gb|AAM22673.1|AF469113_13 unknown [Helicobacter pylori]
Length = 197
Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/177 (19%), Positives = 61/177 (34%), Gaps = 32/177 (18%)
Query: 3 DPREKIALFIDGANL-----YASSKALGFDIDYR----KL-----LKAFRSRAI-----V 43
+ +K A+F+D NL + K DY K+ L F S +
Sbjct: 2 NHTQKTAIFVDFENLRIGVFDKTWKKKRLFFDYNNNPQKVVDFCNLCVFDSYHDKDLLNL 61
Query: 44 IRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVA--KVAKEFTENCGRKRVKSSMDVE 101
R ++YT D + + L L + K+ K G V+ +D+
Sbjct: 62 YRIFFYTAKPLDSHSKKKDILNFLSTLECLNHTALRLGKLVKR-----GDVEVQKQVDML 116
Query: 102 LAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTV----LSDPSMA 152
L +D E S +E +V+ D + + + + I+ +PS+
Sbjct: 117 LGIDMLEISLKHFVEKVVLIGYDSDMSPALKLARTNGIQTEIILFEDLKQKIEPSLT 173
>gi|326381644|ref|ZP_08203338.1| hypothetical protein SCNU_01805 [Gordonia neofelifaecis NRRL
B-59395]
gi|326199891|gb|EGD57071.1| hypothetical protein SCNU_01805 [Gordonia neofelifaecis NRRL
B-59395]
Length = 355
Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/195 (17%), Positives = 66/195 (33%), Gaps = 35/195 (17%)
Query: 10 LFIDGANLYASS--------KALGFDIDYRKLLKAF------RSRAIVIRAYYYTTVVGD 55
L+ID L AS+ G +++Y +L+ S +R ++Y
Sbjct: 38 LYIDTGYLLASAATRVTGTSLRNGINVEYSRLIDTLIETAEKLSGLPTLRVHWY---DSA 94
Query: 56 PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGL 113
+PL + L +V ++ + G + +D+ + +D +
Sbjct: 95 DNGVPNPLQQRIGELA----KVKLRLGR-----FGVNGEQKGVDLRIGLDLVAHARNNTS 145
Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVS--TVLSDPSMASDQLRRQADYFMDLAYLKN 171
+ + SGD T V Q +V +++ T S L R AD + L
Sbjct: 146 DVFFLVSGDDDLTEAVEEAQVHGVQVILLAVPTADGKSHGVSRHLIRAADDLHRIDGLAL 205
Query: 172 E-----IARDPDEDK 181
+ + R P
Sbjct: 206 DESILKVERQPAPKP 220
>gi|149915348|ref|ZP_01903875.1| predicted S-transferase [Roseobacter sp. AzwK-3b]
gi|149810637|gb|EDM70478.1| predicted S-transferase [Roseobacter sp. AzwK-3b]
Length = 232
Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 33/84 (39%), Gaps = 7/84 (8%)
Query: 99 DVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
D+ L +DA + + V+ S D FT L + ++ + +V + +
Sbjct: 77 DIALVIDAMDLMHSGRFDGFVLVSSDSDFTRLASRIREQGLEVYGIGARK-----TPEAF 131
Query: 157 RRQADYFMDLAYLKNEIARDPDED 180
R+ F+ L L E A P +
Sbjct: 132 RKACKRFIYLENLGTEGAETPAPN 155
>gi|300859441|ref|YP_003784424.1| hypothetical protein cpfrc_02024 [Corynebacterium
pseudotuberculosis FRC41]
gi|300686895|gb|ADK29817.1| hypothetical protein cpfrc_02024 [Corynebacterium
pseudotuberculosis FRC41]
gi|302207120|gb|ADL11462.1| Conserved hypothetical protein [Corynebacterium pseudotuberculosis
C231]
gi|302331680|gb|ADL21874.1| Conserved hypothetical protein [Corynebacterium pseudotuberculosis
1002]
gi|308277373|gb|ADO27272.1| Conserved hypothetical protein [Corynebacterium pseudotuberculosis
I19]
Length = 460
Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/172 (20%), Positives = 60/172 (34%), Gaps = 29/172 (16%)
Query: 6 EKIALFIDGANL---YASSKALGF----DIDYRKLLKAFRS------RAIVIRAYYYTTV 52
E+ +F+D + L + +S +G +ID +++ S V R +Y +
Sbjct: 3 ERTQVFVDTSYLLASFYNSWEIGARAQLEIDLPEVVATLGSMIQSQLGQPVHRQLWYDGI 62
Query: 53 VGDPEQQFSPLHPLLDWLHY-NGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE 111
S H L +G Q+ A E+ G +R + +D L D
Sbjct: 63 PD------SGPHRYQRALRTCDGVQLRAGQLIEW----GERRTQKGVDTRLVADMVLAGA 112
Query: 112 G--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
+V+ SGD V +V + SM+S LR D
Sbjct: 113 RREFTDIVLVSGDADMIPGVQEAVNAGVRVHLYGF--GWDSMSS-ALRHCCD 161
>gi|254507560|ref|ZP_05119693.1| protein containing DUF88 [Vibrio parahaemolyticus 16]
gi|219549447|gb|EED26439.1| protein containing DUF88 [Vibrio parahaemolyticus 16]
Length = 240
Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/177 (17%), Positives = 61/177 (34%), Gaps = 29/177 (16%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
KIA+ ID N S L +++ S +I Y +Q
Sbjct: 3 NRKIAVLIDSENTPHSKLNL--------IIEELSSFGQIIVKRAY---GDFSAEQLKNWK 51
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122
L+ L A + + K+S D + +DA + S+ + + S D
Sbjct: 52 QPLNEL-----------AIQAKQQFAYTSGKNSTDSLMIIDAMDLLYSQRFDAFALISSD 100
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
FT+L L+ ++ ++ +M + D F+ + L ++ + +
Sbjct: 101 SDFTSLATRLRE--SEIHVIGV---GKAMTPTSFKNACDDFVAIENLNADVDLEQAQ 152
>gi|288932625|ref|YP_003436685.1| hypothetical protein Ferp_2286 [Ferroglobus placidus DSM 10642]
gi|288894873|gb|ADC66410.1| protein of unknown function DUF88 [Ferroglobus placidus DSM 10642]
Length = 161
Score = 53.2 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/166 (18%), Positives = 66/166 (39%), Gaps = 32/166 (19%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
R+KI + +DG N+ F+++ +++ + S V A +
Sbjct: 23 RKKIGVLVDGPNM----LRKEFNLNLKEIREILDSYGDVKIAKVFI--------NQYAGE 70
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGD 122
L++ + GF+ V +DV++AV+A E + ++ L + + D
Sbjct: 71 KLVEAIENQGFEPVV--------------TSGDVDVKMAVEAMEIIYNDSIDVLALVTRD 116
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
F ++ K K+ I+ ++P ++ L+ AD + L
Sbjct: 117 ADFKAVLQKAMEKGKETIIIG---AEPGFSA-ALKNAADIAICLNE 158
>gi|282165479|ref|YP_003357864.1| hypothetical protein MCP_2809 [Methanocella paludicola SANAE]
gi|282157793|dbj|BAI62881.1| conserved hypothetical protein [Methanocella paludicola SANAE]
Length = 188
Score = 53.2 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/161 (20%), Positives = 58/161 (36%), Gaps = 34/161 (21%)
Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIV-IRAYYYTTVVGDPEQQFSP 62
R IAL +DG N+ F ID + + + + + D
Sbjct: 30 DRRNIALLVDGPNM----LRKEFQIDLEVVRDILKRYGDIKVGKVFLNQYASD------- 78
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
L++ + GF+ + +DV LAVDA E S ++ + I +
Sbjct: 79 --KLVEAIENQGFEPII--------------GSGDVDVRLAVDAVELVFSPTIDTIAIVT 122
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
D F ++A K+ + ++P + S L+ AD
Sbjct: 123 RDADFKPVLAKANSHGKETIVFG---AEPGL-SIALKNVAD 159
>gi|91772864|ref|YP_565556.1| hypothetical protein Mbur_0855 [Methanococcoides burtonii DSM 6242]
gi|91711879|gb|ABE51806.1| Protein of unknown function DUF88 [Methanococcoides burtonii DSM
6242]
Length = 183
Score = 53.2 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/166 (18%), Positives = 55/166 (33%), Gaps = 32/166 (19%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
R I L +DG N+ F+++ ++ + V +
Sbjct: 23 RRSIGLLVDGPNV----LRKEFNVNLEEIRDVLKEYGNVKIGRVFLNQYASD-------- 70
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGD 122
L++ + NGF+ + S +DV LAV+ E ++ + + + D
Sbjct: 71 KLVEAIENNGFEPII--------------CSSDVDVRLAVEGMELVYNPTIDTIALVTRD 116
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
F L+ K+ + S LR ADY + L
Sbjct: 117 ADFKPLLNKANEHGKETILFGVEPGF----STALRNSADYVIILEN 158
>gi|330987024|gb|EGH85127.1| hypothetical protein PLA107_18497 [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 206
Score = 53.2 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/183 (19%), Positives = 70/183 (38%), Gaps = 23/183 (12%)
Query: 5 REKIALFIDGANLYASSKALGFD----IDYRKLLKA-FRSRAIVIRAYYYTTVVGDPEQ- 58
+++ ++DG NL K F +D L A F+ ++ +Y+T + +
Sbjct: 1 MQRVITYVDGFNLSFGLKDSRFKKYYWLDLPALSAALFKPGQQLVATHYFTARIRTNGRN 60
Query: 59 --QFSPLHPLLDWLH-YNGFQVVAKVAKEFTENCG------RKRVKSSMDVELAVDAFEQ 109
+D L + V E T+ C + + DV +A
Sbjct: 61 AADAKRQTSYIDALTAQDNLTVHEGHYLEKTQRCNGCGATWKAYEEKMTDVNIAAQMLAD 120
Query: 110 S--EGLEHLVIFSGDGCFTTLVAALQRK--VKKVTIVSTVLSDPSMASDQLRRQADYFMD 165
+ + + I SGD TT + ++ + K++ +V P+ S QL++ A+ F+
Sbjct: 121 AYEDRFDTAFIISGDSDLTTPIQQVRNRFPNKRLIVV----FPPNRQSAQLKKAANGFLS 176
Query: 166 LAY 168
+
Sbjct: 177 IGE 179
>gi|312136340|ref|YP_004003677.1| hypothetical protein Mfer_0112 [Methanothermus fervidus DSM 2088]
gi|311224059|gb|ADP76915.1| protein of unknown function DUF88 [Methanothermus fervidus DSM
2088]
Length = 174
Score = 53.2 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/170 (14%), Positives = 56/170 (32%), Gaps = 40/170 (23%)
Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIV----IRAYYYTTVVGDPEQQFSPL 63
I L +DG N+ F ++ ++ + + + Y +
Sbjct: 28 IGLLVDGPNM----LRKEFKLNLEQVKEILSEYGNLKVGKVLLNQYASD----------- 72
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSG 121
L++ + GF + V DV +A++A E ++ + + +
Sbjct: 73 -KLIEAISNQGFSPIV--------------VAGDTDVYMAIEAMELIYNPNIDIIALMTR 117
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
D F ++ + K+ ++ S L+ AD+ + L K
Sbjct: 118 DADFLPIINKAKENGKETIVIGAEPGF----SVALKNAADHTIILRSKKE 163
>gi|317132837|ref|YP_004092151.1| hypothetical protein Ethha_1898 [Ethanoligenens harbinense YUAN-3]
gi|315470816|gb|ADU27420.1| hypothetical protein Ethha_1898 [Ethanoligenens harbinense YUAN-3]
Length = 180
Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/191 (19%), Positives = 69/191 (36%), Gaps = 40/191 (20%)
Query: 10 LFIDGANL-----YASSKALG-----------------FDIDYRKLLKAFRSRAI--VIR 45
+++D +N+ Y S+ G + D+ KLL + R
Sbjct: 5 VYVDNSNVWIEGKYYSAVKKGMVANIFDAHENKICDMPWGYDFGKLLNISCEGDENSLKR 64
Query: 46 AYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVD 105
A Y + D + ++ GF+V E KRV + D E+ D
Sbjct: 65 AVLYGSKPTDNDSLWNAARRF-------GFEV---YHPERNVKNKEKRVDTGFDKEVLKD 114
Query: 106 AFEQS-EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
++ +++++ +GD + A+ + K T+V AS+ L+ A F+
Sbjct: 115 LYKSVIGHDDNIILVAGDADHVPVAEAIVEEGMKFTLV-----FWDNASETLKNMASKFI 169
Query: 165 DLAYLKNEIAR 175
L EI R
Sbjct: 170 SLNNYIAEITR 180
>gi|217968792|ref|YP_002354026.1| hypothetical protein Tmz1t_0344 [Thauera sp. MZ1T]
gi|217506119|gb|ACK53130.1| protein of unknown function DUF88 [Thauera sp. MZ1T]
Length = 504
Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/171 (19%), Positives = 63/171 (36%), Gaps = 19/171 (11%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
K ALF+D N+Y+ + L D + F + + ++ S +
Sbjct: 2 KSALFVDFDNVYSGLRKL----DP-AMADQFAQKPQRWMQWLVASLGLPEHSPESARRRV 56
Query: 67 LDWLHYNGFQVVAKVAKEFTEN--------CGRKRVKSSMDVELA---VDAFEQSEGLEH 115
L Y QV + F K+S D+ + +D + +
Sbjct: 57 LVRRCYLNPQVYQRFRPSFNLAGFEIIDCPSLTSEGKTSTDIHMVLDIIDLLQHEAHYDE 116
Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTI--VSTVLSDPSMASDQLRRQADYFM 164
++FS D FT ++ L+R ++ T+ + + ++D L Q D F+
Sbjct: 117 FIVFSADADFTPVLRKLRRWDRRTTVLAIGFPSAAYRASADLLIDQ-DLFV 166
>gi|284165328|ref|YP_003403607.1| hypothetical protein Htur_2050 [Haloterrigena turkmenica DSM 5511]
gi|284014983|gb|ADB60934.1| protein of unknown function DUF88 [Haloterrigena turkmenica DSM
5511]
Length = 156
Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/163 (22%), Positives = 53/163 (32%), Gaps = 31/163 (19%)
Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
+ L +DG N++ FD+D L A R V Y L+
Sbjct: 23 VGLLVDGPNVF----RDEFDVDLNDLRDAARDLGRVGVIRLYL--------DEHATPGLI 70
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCF 125
GF+V+ +DV+LAVDA ++ L I S D F
Sbjct: 71 QAAEARGFEVIV--------------TSGDVDVKLAVDATALCSDGTIDRLAIGSRDTDF 116
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
++ V V+ SD LR AD + L
Sbjct: 117 KPVLEYAGTVG--VETVAIAPGTYGR-SDALRNAADEAITLGD 156
>gi|218248953|ref|YP_002374324.1| hypothetical protein PCC8801_4244 [Cyanothece sp. PCC 8801]
gi|257062039|ref|YP_003139927.1| hypothetical protein Cyan8802_4306 [Cyanothece sp. PCC 8802]
gi|218169431|gb|ACK68168.1| protein of unknown function DUF88 [Cyanothece sp. PCC 8801]
gi|256592205|gb|ACV03092.1| protein of unknown function DUF88 [Cyanothece sp. PCC 8802]
Length = 299
Score = 52.8 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/159 (20%), Positives = 59/159 (37%), Gaps = 26/159 (16%)
Query: 7 KIALFIDGANLYASSKALGFD------IDYRKLLKAFRSR-----------AIVIRAYYY 49
+I +F DG S ++ + L + R + ++ A+Y+
Sbjct: 9 RIGIFYDGNYFLHVSNYYNYNHERKARVSIPGLHEFIRHQVAKEEGVDVRLCQIVDAHYF 68
Query: 50 TTVVGDPEQQFSPL---HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA 106
+ E + L D L G + + G K + +DV LA++A
Sbjct: 69 RGRLSAGEASRNQLYYDRVFDDILMSEGVITHYLPLRTW----GGKMEEKGIDVWLALEA 124
Query: 107 FEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS 143
FE + + LV+ + DG + LV L +V ++S
Sbjct: 125 FELAFYKRFSVLVLIACDGDYVPLVRKLNTLGTRVMVLS 163
>gi|163746469|ref|ZP_02153827.1| hypothetical protein OIHEL45_13730 [Oceanibulbus indolifex HEL-45]
gi|161380354|gb|EDQ04765.1| hypothetical protein OIHEL45_13730 [Oceanibulbus indolifex HEL-45]
Length = 232
Score = 52.4 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 34/85 (40%), Gaps = 7/85 (8%)
Query: 87 ENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVST 144
+ + K++ D+ L + A + S + +VI S D FT LV L+ V +
Sbjct: 66 QETANTKGKNASDIGLVIQAMDILHSRRFDIIVIVSSDSDFTALVNRLREDGVTVIGIGE 125
Query: 145 VLSDPSMASDQLRRQADYFMDLAYL 169
D LR + F+ + L
Sbjct: 126 KK-----THDSLRNVYNRFILIENL 145
>gi|260579645|ref|ZP_05847514.1| conserved hypothetical protein [Corynebacterium jeikeium ATCC
43734]
gi|258602286|gb|EEW15594.1| conserved hypothetical protein [Corynebacterium jeikeium ATCC
43734]
Length = 455
Score = 52.4 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/172 (18%), Positives = 60/172 (34%), Gaps = 29/172 (16%)
Query: 6 EKIALFIDGANL---YA----SSKALGFDIDYRKLLKAFRS------RAIVIRAYYYTTV 52
E+ +++D + L + + +ID +++ + V R ++Y +
Sbjct: 3 ERTQVYVDTSYLLASFYNSWDTGARAQLEIDLPEVVAVLGQMIQDQLKQPVHRQFWYDGI 62
Query: 53 VGDPEQQFSPLHPLLDWLHYN-GFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS- 110
S H L G Q+ A E+ + R+ K+ +D L D +
Sbjct: 63 PD------SGPHRYQRSLRSEPGVQLRAGQLIEWGD---RRTQKA-VDTRLVADIVIAAM 112
Query: 111 -EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
+ +V+ SGD V +V + SM+S LR D
Sbjct: 113 KRQVSDIVLVSGDADMLPGVEEAVAAGIRVHLYGF--GWDSMSS-ALRFACD 161
>gi|317132397|ref|YP_004091711.1| hypothetical protein Ethha_1443 [Ethanoligenens harbinense YUAN-3]
gi|315470376|gb|ADU26980.1| hypothetical protein Ethha_1443 [Ethanoligenens harbinense YUAN-3]
Length = 201
Score = 52.4 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/187 (15%), Positives = 60/187 (32%), Gaps = 35/187 (18%)
Query: 5 REKIALFIDGANL------YASSKALGFD---IDYR----KLLKAFRSRAIVIRAYYYTT 51
+++ +FID N Y + G +DY +L K +++ + +
Sbjct: 1 MQRVMVFIDQLNFEIALLNYY--RDNGSQAPRLDYNAIPVELTKLLPGENHLVKTFLFVP 58
Query: 52 VVGDPEQQFSPLHPLLDWLHYNG----FQVVAKVAKEFT----------ENCGRKRVKSS 97
+ +W++ F V+ + + +
Sbjct: 59 KPDEFLMNLPRWQHYSNWINGMKNQHYFTVIEGSYVARQIDESIPMDANDPRSYYKEEKG 118
Query: 98 MDVELAVDAFE--QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQ 155
D+ +AV + +I SGD + T++ L K T+++ V S
Sbjct: 119 TDINIAVHVLTKGFMNAYDTALILSGDSDYVTVLDILNMIGK-TTVIAGVKGQ--NISK- 174
Query: 156 LRRQADY 162
LR+ D
Sbjct: 175 LRKSCDD 181
>gi|119714385|ref|YP_921350.1| hypothetical protein Noca_0118 [Nocardioides sp. JS614]
gi|119535046|gb|ABL79663.1| protein of unknown function DUF88 [Nocardioides sp. JS614]
Length = 286
Score = 52.4 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 39/174 (22%), Positives = 59/174 (33%), Gaps = 30/174 (17%)
Query: 1 MFDPRE-KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
M +P + ++A+ ID N+ AS A LL + Y +
Sbjct: 1 MTEPADVRLAVLIDADNVSASHAA--------DLLAELARYGVPTVKRAY------GDWT 46
Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLV 117
L L + Q ++F G K+S D L +DA + S L+
Sbjct: 47 TQQLAGWKSELARHAIQ----PIQQFANTVG----KNSTDSALIIDAMDLLYSGHLDAFA 98
Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
I S D FT L L+ K V L+ D F+ L L++
Sbjct: 99 IVSSDSDFTRLATRLRESGKTV-----YGLGRRRTPASLQAACDKFIFLEVLRD 147
>gi|329888562|ref|ZP_08267160.1| hypothetical protein BDIM_04870 [Brevundimonas diminuta ATCC 11568]
gi|328847118|gb|EGF96680.1| hypothetical protein BDIM_04870 [Brevundimonas diminuta ATCC 11568]
Length = 246
Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/168 (19%), Positives = 59/168 (35%), Gaps = 29/168 (17%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
++A+ IDG N AS++ F A + A + L
Sbjct: 14 RLAVLIDGEN--ASARIAE---------ALFTEIATLGEASARRIYG---DAASPALRGW 59
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124
+D V+ + A ++ +N + K+S D+ L +DA + S + + S D
Sbjct: 60 ID--------VLPRWAIQWQQNFQNTKGKNSGDIALVIDAMDLLHSGRFDGFCLVSSDSD 111
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
FT L A ++ + V + + R+ F+ L
Sbjct: 112 FTRLAARIREQG--VPVYGFGERK---TPESFRQACTRFIYTENLTGR 154
>gi|68535150|ref|YP_249855.1| hypothetical protein jk0087 [Corynebacterium jeikeium K411]
gi|68262749|emb|CAI36237.1| hypothetical protein jk0087 [Corynebacterium jeikeium K411]
Length = 451
Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/172 (18%), Positives = 60/172 (34%), Gaps = 29/172 (16%)
Query: 6 EKIALFIDGANL---YA----SSKALGFDIDYRKLLKAFRS------RAIVIRAYYYTTV 52
E+ +++D + L + + +ID +++ + V R ++Y +
Sbjct: 3 ERTQVYVDTSYLLASFYNSWDTGARAQLEIDLPEVVAVLGQMIQDQLKQPVHRQFWYDGI 62
Query: 53 VGDPEQQFSPLHPLLDWLHYN-GFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS- 110
S H L G Q+ A E+ + R+ K+ +D L D +
Sbjct: 63 PD------SGPHRYQRSLRSEPGVQLRAGQLIEWGD---RRTQKA-VDTRLVADIVIAAM 112
Query: 111 -EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
+ +V+ SGD V +V + SM+S LR D
Sbjct: 113 KRQVSDIVLVSGDADMLPGVEEAVAAGIRVHLYGF--GWDSMSS-ALRFACD 161
>gi|288917691|ref|ZP_06412054.1| hypothetical protein FrEUN1fDRAFT_1749 [Frankia sp. EUN1f]
gi|288350906|gb|EFC85120.1| hypothetical protein FrEUN1fDRAFT_1749 [Frankia sp. EUN1f]
Length = 108
Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 25/69 (36%), Gaps = 2/69 (2%)
Query: 77 VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQR 134
VV + + + +DV LAVD + + V+FS D + ++
Sbjct: 3 VVRRQLRYPKAWPAEPAQEKGIDVALAVDFVRLACESAYDVGVLFSRDTDLVPALETVRD 62
Query: 135 KVKKVTIVS 143
V + S
Sbjct: 63 LGAHVEVAS 71
>gi|226226060|ref|YP_002760166.1| hypothetical protein GAU_0654 [Gemmatimonas aurantiaca T-27]
gi|226089251|dbj|BAH37696.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
Length = 728
Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 46/124 (37%), Gaps = 9/124 (7%)
Query: 64 HPLLDWLHYNGFQV-VAKVAKEFTENCGRKRVKSSM-DVELAVDAFEQS---EGLEHLVI 118
DW Y + V + + + + K + D+ LA+DA E + V+
Sbjct: 53 RAYADWRRYPQYIVPLTEASIDLIFAPAYGSSKKNATDIRLAIDALELVFTRPEIGTFVL 112
Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
SGD F+++V L+ K V + +SD L D + L + D
Sbjct: 113 LSGDSDFSSMVIKLKEYGKYV----IGVGIRESSSDLLVMNCDEYYSYNALAGLVKTGED 168
Query: 179 EDKK 182
E +
Sbjct: 169 ETTR 172
>gi|14520299|ref|NP_125774.1| hypothetical protein PAB0043 [Pyrococcus abyssi GE5]
gi|5457514|emb|CAB49005.1| Conserved archaebacterial protein, DUF88 family [Pyrococcus abyssi
GE5]
Length = 162
Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 34/168 (20%), Positives = 61/168 (36%), Gaps = 36/168 (21%)
Query: 8 IALFIDGANLYASSKALGFDI-DYRKLLKAFRS-RAIVIRAYYYTTVVGDPEQQFSPLHP 65
I L IDG N+ K G + D +K L+ R + Y
Sbjct: 23 IGLIIDGPNILR--KEFGIKLEDIKKALERIGKIRVAKVVLNQYAP------------QG 68
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDG 123
L++ + GF+ + V DV +A++A E ++ + + + D
Sbjct: 69 LIEAVVNQGFEPII--------------VAGDTDVRMAIEAMELIYNADVDVIALATRDA 114
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
F L++ +RK K+ ++ S L+ ADY + + K
Sbjct: 115 DFLPLISEAKRKGKETVVIGVEPGF----SVALQNAADYIIKMEKKKE 158
>gi|327404779|ref|YP_004345617.1| hypothetical protein Fluta_2799 [Fluviicola taffensis DSM 16823]
gi|327320287|gb|AEA44779.1| hypothetical protein Fluta_2799 [Fluviicola taffensis DSM 16823]
Length = 250
Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 36/175 (20%), Positives = 61/175 (34%), Gaps = 35/175 (20%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
+K+A+ ID N+ SS +++L+ Y
Sbjct: 1 MNEQKMAVLIDADNVPYSS--------IKEMLEEVAKTGTPTIKRIYA------------ 40
Query: 63 LHPLLDWLHYN--GFQ-VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLV 117
DW N G++ V+ + A + K+S D L +DA + S+ ++
Sbjct: 41 -----DWTKPNANGWKGVLLENAITPIQQYSYTSGKNSSDSALIIDAMDILYSQQVDGFC 95
Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
I S D FT L L+ KKV + + D F+ + LK +
Sbjct: 96 IVSSDSDFTRLATRLRESGKKVMGIGEKKTPLPF-----ITACDKFVYIEILKPK 145
>gi|83949890|ref|ZP_00958623.1| hypothetical protein ISM_02310 [Roseovarius nubinhibens ISM]
gi|83837789|gb|EAP77085.1| hypothetical protein ISM_02310 [Roseovarius nubinhibens ISM]
Length = 231
Score = 52.1 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 30/84 (35%), Gaps = 7/84 (8%)
Query: 99 DVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
D+ L +DA + + V+ S D FT L + L+ + +V + +
Sbjct: 77 DIALVIDAMDLMHTGRFDGFVLVSSDSDFTRLASRLREQGLEVFGIGARK-----TPEAF 131
Query: 157 RRQADYFMDLAYLKNEIARDPDED 180
R+ F+ L L +
Sbjct: 132 RKACKRFIYLENLGGAPETESRAP 155
>gi|317471517|ref|ZP_07930868.1| hypothetical protein HMPREF1011_01216 [Anaerostipes sp. 3_2_56FAA]
gi|316901012|gb|EFV22975.1| hypothetical protein HMPREF1011_01216 [Anaerostipes sp. 3_2_56FAA]
Length = 351
Score = 52.1 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 35/184 (19%), Positives = 63/184 (34%), Gaps = 33/184 (17%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRK-LLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
M + ++ AL ID N+ S+K Y K +L + Y
Sbjct: 1 MENKEKRFALLIDADNI--SAK-------YIKPILDELSQYGNITYKRIY-------GDW 44
Query: 60 FSPLH-PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHL 116
S LH + L N ++F+ G+ D + +DA + + ++
Sbjct: 45 TSTLHASWKEELLANSIT----PIQQFSYTQGKNAT----DSAMIIDAMDILYANRVDGF 96
Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
I S D FT L + ++ V + + P+ R+ D F +L L +
Sbjct: 97 CIVSSDSDFTRLASRIRETGLTVIGMGEGKTPPAF-----RKACDVFTNLELLIEDKEEK 151
Query: 177 PDED 180
+
Sbjct: 152 ESKP 155
>gi|222112194|ref|YP_002554458.1| hypothetical protein Dtpsy_3025 [Acidovorax ebreus TPSY]
gi|221731638|gb|ACM34458.1| protein of unknown function DUF88 [Acidovorax ebreus TPSY]
Length = 285
Score = 52.1 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 34/175 (19%), Positives = 52/175 (29%), Gaps = 31/175 (17%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
M + + +IAL ID N A ID ++L + + Y
Sbjct: 1 MAERQLRIALLIDADN------APADKID--EILTELSTLGEINVRRAYGNWTKS----- 47
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSM-DVELAVDAFEQ--SEGLEHLV 117
G+Q + + D+ + VDA E SE +
Sbjct: 48 ----------GLGGWQQRLLEFAIRPIQQFDYSKRKNATDMAMTVDAMELLYSERPDAFG 97
Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
+ S D FT LV L+ K V + F+ L L +E
Sbjct: 98 LVSSDADFTPLVMHLRAKGSAVYGFGAAQTPKPFV-----NACSRFLYLESLVSE 147
>gi|160896833|ref|YP_001562415.1| hypothetical protein Daci_1386 [Delftia acidovorans SPH-1]
gi|160362417|gb|ABX34030.1| protein of unknown function DUF88 [Delftia acidovorans SPH-1]
Length = 303
Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 37/173 (21%), Positives = 59/173 (34%), Gaps = 29/173 (16%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
M +P+ +IAL ID N A ID ++L + ++ Y
Sbjct: 1 MPEPQPRIALLIDADN------APAEMID--EILTELSTFGVIDIRRAY--GNWTKHSLS 50
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118
LLD+ + ++F + K++ D+ + VDA E +E + I
Sbjct: 51 GWQRKLLDF--------ALRPMQQFD----YSKHKNATDMAMTVDAMELLYTERPDAFGI 98
Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
S D FT LV L+ K V + F+ L L
Sbjct: 99 VSSDADFTPLVMHLRSKGAAVYGFGMAQTPQPFV-----NACSRFLYLEALGE 146
>gi|50955250|ref|YP_062538.1| hypothetical protein Lxx16560 [Leifsonia xyli subsp. xyli str.
CTCB07]
gi|50951732|gb|AAT89433.1| conserved hypothetical protein [Leifsonia xyli subsp. xyli str.
CTCB07]
Length = 362
Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 36/207 (17%), Positives = 66/207 (31%), Gaps = 49/207 (23%)
Query: 1 MFDPRE-KIALFIDGANLY---------------------------ASSKALGFDIDYRK 32
M +P + ++A++ID N+ ++K +D
Sbjct: 10 MSEPGDGRVAVYIDFDNIVISRYDQVHGRGQFMRDKQKTGALPKPAFAAKLAEARVDLGA 69
Query: 33 LLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRK 92
++ S ++ Y ++ Q+V +
Sbjct: 70 IIDFASSFGTIVLTRAYADWSSAVNAEYRG-------------QLVGRAVDLVQLFPAAA 116
Query: 93 RVKSSMDVELAVDAFE---QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDP 149
K+ D+ LAVD E + L H+VI +GD + L ++R + V +
Sbjct: 117 YGKNGGDIRLAVDTVEDLFRLPELTHVVIVAGDSDYIPLAQRIKRLGRYV----IGIGIA 172
Query: 150 SMASDQLRRQADYFMDLAYLKNEIARD 176
+ L D F+ L IARD
Sbjct: 173 GSTARSLAAACDEFVSYDDLPG-IARD 198
>gi|224000195|ref|XP_002289770.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974978|gb|EED93307.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 735
Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/174 (17%), Positives = 55/174 (31%), Gaps = 46/174 (26%)
Query: 7 KIALFIDGANLYAS--SKA-----------LGFDIDYRKLLKAFRS-------------- 39
K LFIDG LY S ++ G+ +Y+ A
Sbjct: 162 KAMLFIDGTWLYYSLHARNANRCPIVPRFGQGWQSNYKVDWLALPRLICEQIDKQRNSQT 221
Query: 40 -------RAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRK 92
+ R +T+ + + + + + V G K
Sbjct: 222 SFKGSDRPLEISRVMVFTSAKKETDPNSIRMRMF-REMSNANYDVHMMETV----GQGEK 276
Query: 93 RVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS 143
V D++LAV+ + + ++ +GD F + ++K K+V I S
Sbjct: 277 CV----DIQLAVEMLHYATVPNAYDVAILLTGDKDFVPALVRTRQKGKQVVICS 326
>gi|220903862|ref|YP_002479174.1| hypothetical protein Ddes_0587 [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219868161|gb|ACL48496.1| protein of unknown function DUF88 [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 240
Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 34/166 (20%), Positives = 60/166 (36%), Gaps = 37/166 (22%)
Query: 9 ALFIDGANLYA--------SSKALGFDIDYR----------KLLKAFRSRAIVIRAYYYT 50
AL++D N++ +++A G YR ++L R +++ Y
Sbjct: 13 ALYVDFDNIFTRFLEIDPEAARAFGAT-PYRWVRWIENHALRILYGEGVRRRILKRMCYL 71
Query: 51 TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAF--- 107
+ + FQVV R K+S D+ L +D
Sbjct: 72 --------NPQRYQEFRNSFIRSAFQVVDCP-------PLTSRGKTSTDIHLVMDCMDDL 116
Query: 108 EQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMAS 153
S + +I SGD FT L+ LQ ++ ++S S P+ +
Sbjct: 117 SHSTKFDEFIILSGDADFTPLLIRLQEHARRTLVLSVGYSSPAYTA 162
>gi|289677366|ref|ZP_06498256.1| hypothetical protein PsyrpsF_29051 [Pseudomonas syringae pv.
syringae FF5]
gi|330897316|gb|EGH28735.1| hypothetical protein PSYJA_07026 [Pseudomonas syringae pv. japonica
str. M301072PT]
gi|330981730|gb|EGH79833.1| hypothetical protein PSYAP_24706 [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 264
Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 39/100 (39%), Gaps = 7/100 (7%)
Query: 76 QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQ 133
+V+ + + + + K++ D L +DA + + + + S D FT L + L+
Sbjct: 59 KVLLDYSIQPIQQFAYTKGKNATDSSLIIDAMDLLYTRRFDGFCLVSSDSDFTRLASRLR 118
Query: 134 RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
+ V + + D F+ + L+ EI
Sbjct: 119 EEGLTVYGFGEEKTPKPFVA-----ACDKFIYIELLREEI 153
>gi|330943326|gb|EGH45703.1| hypothetical protein PSYPI_26719 [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 179
Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 39/100 (39%), Gaps = 7/100 (7%)
Query: 76 QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQ 133
+V+ + + + + K++ D L +DA + + + + S D FT L + L+
Sbjct: 59 KVLLDYSIQPIQQFAYTKGKNATDSSLIIDAMDLLYTRRFDGFCLVSSDSDFTRLASRLR 118
Query: 134 RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
+ V + + D F+ + L+ EI
Sbjct: 119 EEGLTVYGFGEEKTPKPFVA-----ACDKFIYIELLREEI 153
>gi|296171006|ref|ZP_06852490.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295894402|gb|EFG74150.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 214
Score = 51.7 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 54/144 (37%), Gaps = 19/144 (13%)
Query: 8 IALFIDGANLYA-----SSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
+A+++DG NLY S + + +D L + R ++ + + Y+T V + +
Sbjct: 13 LAVYVDGFNLYHGLHEASGRKHLW-LDVVALAQNLRPQSSLAKVMYFTAPVLNDSGGLAR 71
Query: 63 LHPLLDWLHYNG----------FQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE- 111
L+ L +Q K K+ N R + DV +A++ +
Sbjct: 72 QQRYLNALKAQNPGVIEIVEGRYQQKNKTCKK-CGNTWRTYEEKETDVNIAINLVADASI 130
Query: 112 -GLEHLVIFSGDGCFTTLVAALQR 134
+ +I S D V ++
Sbjct: 131 KLTDAALIISADSDLAPGVKLARK 154
>gi|66046764|ref|YP_236605.1| hypothetical protein Psyr_3535 [Pseudomonas syringae pv. syringae
B728a]
gi|63257471|gb|AAY38567.1| conserved hypothetical protein [Pseudomonas syringae pv. syringae
B728a]
gi|330973591|gb|EGH73657.1| hypothetical protein PSYAR_24186 [Pseudomonas syringae pv. aceris
str. M302273PT]
Length = 264
Score = 51.7 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 41/108 (37%), Gaps = 7/108 (6%)
Query: 76 QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQ 133
+V+ + + + + K++ D L +DA + + + + S D FT L + L+
Sbjct: 59 KVLLDYSIQPIQQFAYTKGKNATDSSLIIDAMDLLYTRRFDGFCLVSSDSDFTRLASRLR 118
Query: 134 RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
+ V + + D F+ + L+ EIA D
Sbjct: 119 EEGLTVYGFGEEKTPKPFVA-----ACDKFIYIELLREEIAVPASADP 161
>gi|220928157|ref|YP_002505066.1| hypothetical protein Ccel_0707 [Clostridium cellulolyticum H10]
gi|219998485|gb|ACL75086.1| protein of unknown function DUF88 [Clostridium cellulolyticum H10]
Length = 258
Score = 51.7 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 31/177 (17%), Positives = 60/177 (33%), Gaps = 31/177 (17%)
Query: 1 MFDPREKIALFIDGANL-YASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
M ++A+ ID N+ Y++ K +++ Y +
Sbjct: 1 MSPDEMRLAVLIDAENVPYSNVKG---------IMEEIAKHGTPTLKRIYA------DWT 45
Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLV 117
+ + L N ++++ G K+S D + +DA + S+ +E
Sbjct: 46 KPTMSGWKNVLLENAIT----PIQQYSYTSG----KNSSDSAMIIDAMDILYSDQVEGFC 97
Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
I S D FT LV L+ KKV + + + D F + + +
Sbjct: 98 IVSSDSDFTRLVTRLREAGKKVYGIGERKTPSPFIA-----ACDKFTYIEIISASLQ 149
>gi|302188168|ref|ZP_07264841.1| hypothetical protein Psyrps6_17563 [Pseudomonas syringae pv.
syringae 642]
Length = 264
Score = 51.7 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 39/100 (39%), Gaps = 7/100 (7%)
Query: 76 QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQ 133
+V+ + + + + K++ D L +DA + + + + S D FT L + L+
Sbjct: 59 KVLLDYSIQPIQQFAYTKGKNATDSSLIIDAMDLLYTRRFDGFCLVSSDSDFTRLASRLR 118
Query: 134 RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
+ V + + D F+ + L+ EI
Sbjct: 119 EEGLTVYGFGEEKTPKPFVA-----ACDKFIYIELLREEI 153
>gi|46580394|ref|YP_011202.1| hypothetical protein DVU1985 [Desulfovibrio vulgaris str.
Hildenborough]
gi|120602234|ref|YP_966634.1| hypothetical protein Dvul_1187 [Desulfovibrio vulgaris DP4]
gi|46449811|gb|AAS96461.1| conserved domain protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|120562463|gb|ABM28207.1| conserved hypothetical protein [Desulfovibrio vulgaris DP4]
gi|311233631|gb|ADP86485.1| hypothetical protein Deval_1329 [Desulfovibrio vulgaris RCH1]
Length = 418
Score = 51.3 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/167 (19%), Positives = 63/167 (37%), Gaps = 39/167 (23%)
Query: 9 ALFIDGANLYA--------SSKALGFDIDYRKLLKAFRS-----------RAIVIRAYYY 49
AL++D N+Y +++ G + ++ LK R +++ Y
Sbjct: 13 ALYVDFDNIYTRLREMDPETARLFGR--NPQRWLKWLEGHALKMLYGDGVRRRILKRICY 70
Query: 50 TTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVD---A 106
+ + P FQVV ++ K+S D+ L +D A
Sbjct: 71 L-----NPEWYQEYRPYF---IRAAFQVVDCP-------PLTQQGKTSADIHLVMDCMDA 115
Query: 107 FEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMAS 153
+ + +I SGD FT L+ +Q ++ ++S + P+ A+
Sbjct: 116 LSHTTRFDEFIILSGDADFTPLLIRIQEHARRSLVLSVGYTSPAYAA 162
>gi|303246560|ref|ZP_07332839.1| protein of unknown function DUF88 [Desulfovibrio fructosovorans JJ]
gi|302492270|gb|EFL52145.1| protein of unknown function DUF88 [Desulfovibrio fructosovorans JJ]
Length = 283
Score = 51.3 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 39/185 (21%), Positives = 64/185 (34%), Gaps = 26/185 (14%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
+++A+F+D Y + G I RK R V T + +
Sbjct: 1 MDRVAIFVDAG--YFCTGG-GSSIAGRK-----TKRREVNVKIDNTIAFLKEKSKKLSGL 52
Query: 65 PLLDWLHYNG-----------FQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--E 111
PLL Y+G + A K + +D + D E S
Sbjct: 53 PLLRIYWYDGALSQNLTTEQQYIASAADVKLRLGTVNGYGEQKGVDARIVTDLTELSRLN 112
Query: 112 GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF--MDLAYL 169
+ V+ +GD V Q + +V ++S S S LRR+AD + + +
Sbjct: 113 AICDAVLLAGDEDLRIGVELAQAQGVRVHLLSIQNSG---CSTPLRREADTCSEISIDEI 169
Query: 170 KNEIA 174
KN I+
Sbjct: 170 KNLIS 174
>gi|227502160|ref|ZP_03932209.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49725]
gi|227076984|gb|EEI14947.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49725]
Length = 391
Score = 51.3 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 29/172 (16%), Positives = 55/172 (31%), Gaps = 29/172 (16%)
Query: 6 EKIALFIDGANL---YA----SSKALGFDIDYRKLLK------AFRSRAIVIRAYYYTTV 52
E+ +F+D + L + + +ID +++ + + R Y+Y +
Sbjct: 3 ERTLVFVDTSYLLASFYNSWETGARAQLEIDLPEVVSTMGGMIEEQLGNPIQRQYWYDGI 62
Query: 53 VGDPEQQFSPLHPLLDWLHYN-GFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS- 110
+ H L G Q+ E+ G +R + +D L D +
Sbjct: 63 PD------TGPHRYQRALRTCEGVQLRTGQLIEW----GERRTQKGVDTRLVADMVMAAV 112
Query: 111 -EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
V+ SGD +V + SM++ LR D
Sbjct: 113 KNQFTDFVLVSGDADMIPGAQTAVDNGIRVHLYGF--GWDSMSA-ALRHTCD 161
>gi|302692514|ref|XP_003035936.1| hypothetical protein SCHCODRAFT_105537 [Schizophyllum commune H4-8]
gi|300109632|gb|EFJ01034.1| hypothetical protein SCHCODRAFT_105537 [Schizophyllum commune H4-8]
Length = 837
Score = 51.3 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 53/148 (35%), Gaps = 24/148 (16%)
Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
+ +F D N S+ G++I R + + V Y Q + +
Sbjct: 7 VGIFWDFENCRYSAGRSGYEI-ARAIEQVALEYGTVSDFNAYL-----DMQFCALPATMR 60
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEH-----LVIFSGD 122
L +G +V +C K +D L D + L+H L++ SGD
Sbjct: 61 SELQSSGVALV---------DCPHNGQKDVVDQMLQTDMLAYA--LDHPAPATLILISGD 109
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPS 150
F V+ L+R+ + +V S P
Sbjct: 110 RDFAYTVSVLRRR--RYEVVLLCHSQPG 135
>gi|218780432|ref|YP_002431750.1| hypothetical protein Dalk_2589 [Desulfatibacillum alkenivorans
AK-01]
gi|218761816|gb|ACL04282.1| conserved hypothetical protein [Desulfatibacillum alkenivorans
AK-01]
Length = 207
Score = 51.3 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 32/182 (17%), Positives = 68/182 (37%), Gaps = 28/182 (15%)
Query: 7 KIALFIDGANLYASSKA---LGFDIDYRKLLKAFRSRAIVI-RAYYYTTVVGD--PEQQF 60
+ +++IDG NLY + + +D ++L VI Y+T +V +Q
Sbjct: 2 RTSVYIDGFNLYYRALRGTPYKW-LDLKQLAANLLQPKHVITEIKYFTAIVSGIFDPRQP 60
Query: 61 SPLHPLLDWL------------HYNGFQVV---AKVAKEFTENCGRKRVKSSMDVELAVD 105
+ L H+ V + +A+ + K + DV LAV
Sbjct: 61 IRQKTYIRALESYIPEVSVHYGHFLSHTVSLPQSPLAQPPSFAKVIKTEEKGSDVNLAVH 120
Query: 106 AFEQS--EGLEHLVIFSGDGCFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADY 162
+ + + ++ S D + ++ + K + ++S S +L++ A +
Sbjct: 121 LLNDAWLDKYDCAIVISNDSDLAEPLRLIREQNGKLLGLLS--PLVQGHPSQELQKHA-H 177
Query: 163 FM 164
F+
Sbjct: 178 FV 179
>gi|20094200|ref|NP_614047.1| hypothetical protein MK0763 [Methanopyrus kandleri AV19]
gi|19887222|gb|AAM01977.1| Uncharacterized conserved protein [Methanopyrus kandleri AV19]
Length = 179
Score = 51.3 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 32/169 (18%), Positives = 60/169 (35%), Gaps = 36/169 (21%)
Query: 8 IALFIDGANLYASSKALGFDID--YRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
IA+ IDG N+ L + D +++ + + +
Sbjct: 24 IAMLIDGPNM------LRKEFDVSLKEVRELVEELGNIRVGLAFLNQYASD--------K 69
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDG 123
L++ + GF +DV LAV+A E S+ ++ + + + D
Sbjct: 70 LIEAVANQGFVPRVIP--------------GDVDVYLAVEAMELIYSDNVDAIALMTRDT 115
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
F ++A + + K V+ V+ S L+ ADY + L K
Sbjct: 116 DFLPIIAKAKEQGK----VTIVIGADPGFSTALQNAADYVIKLKPRKER 160
>gi|124265642|ref|YP_001019646.1| hypothetical protein Mpe_A0449 [Methylibium petroleiphilum PM1]
gi|124258417|gb|ABM93411.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
Length = 251
Score = 51.3 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 27/75 (36%), Gaps = 2/75 (2%)
Query: 99 DVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
D+ LA+DA E ++ +V+ S D F L+ L+ +V
Sbjct: 74 DLALAIDAVELVLRQPVDEVVLVSSDRDFAPLIVRLRELGCRVVGYGQHGKTAQDVERDY 133
Query: 157 RRQADYFMDLAYLKN 171
R D F L +
Sbjct: 134 LRVYDEFHVLGAARP 148
>gi|300710717|ref|YP_003736531.1| hypothetical protein HacjB3_06760 [Halalkalicoccus jeotgali B3]
gi|299124400|gb|ADJ14739.1| hypothetical protein HacjB3_06760 [Halalkalicoccus jeotgali B3]
Length = 157
Score = 51.3 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/162 (18%), Positives = 54/162 (33%), Gaps = 31/162 (19%)
Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
+ L +DG N+ FD+D + ++ Y L+
Sbjct: 22 VGLLVDGPNV----LREEFDVDLDDVRAVGDDAGTLVATRLYL--------DEHATPGLI 69
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCF 125
G++VV +DV+LA+DA E + ++ L++ S D F
Sbjct: 70 QAAEARGYEVVI--------------TSGDVDVKLAIDATELVYTDAVDTLMVVSRDTDF 115
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
++ ++ V+ SD LR A + L
Sbjct: 116 KPVLEKAAKRGIHTVAVAPGTYGR---SDALRNAAQEAVLLD 154
>gi|239944100|ref|ZP_04696037.1| hypothetical protein SrosN15_24076 [Streptomyces roseosporus NRRL
15998]
gi|239990553|ref|ZP_04711217.1| hypothetical protein SrosN1_24813 [Streptomyces roseosporus NRRL
11379]
gi|291447568|ref|ZP_06586958.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
gi|291350515|gb|EFE77419.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
Length = 306
Score = 51.3 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 32/188 (17%), Positives = 63/188 (33%), Gaps = 31/188 (16%)
Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53
A+F+D +YA++ L FD+D L++AF +A ++R Y+Y
Sbjct: 43 AIFVDAGYVYAAAGLLVTGTEDRRSFDLDAEGLIEAFIDKARTIFADSRLLRVYWY---- 98
Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
+ + K N + +D + D +
Sbjct: 99 --DGARRRIHTTEQQAIAELP------DVKVRLGNLNANNQQKGVDSLIRTDLESLARHR 150
Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169
+ + GD + V A Q +V + ++ ++ L + D DL +
Sbjct: 151 AISDAALVGGDEDLVSAVEAAQGYGARVHLWGIEAAEGRNQAEPLLWEVDSQRTFDLDFC 210
Query: 170 KNEIARDP 177
+ + R P
Sbjct: 211 RPYVTRRP 218
>gi|303325412|ref|ZP_07355855.1| conserved hypothetical protein [Desulfovibrio sp. 3_1_syn3]
gi|302863328|gb|EFL86259.1| conserved hypothetical protein [Desulfovibrio sp. 3_1_syn3]
Length = 228
Score = 51.3 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 37/96 (38%), Gaps = 10/96 (10%)
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAF---EQSEGLEHLV 117
+ + FQVV R K+S D+ L +D S + +
Sbjct: 88 QRYQEFRNPFIRSAFQVVDCP-------PLTSRGKTSTDIHLVMDCMDDLSHSTHFDEFI 140
Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMAS 153
I SGD FT L+ LQ ++ ++S S P+ +
Sbjct: 141 ILSGDADFTPLLIRLQEHARRTLVLSVGYSSPAYTA 176
>gi|262197445|ref|YP_003268654.1| hypothetical protein Hoch_4264 [Haliangium ochraceum DSM 14365]
gi|262080792|gb|ACY16761.1| protein of unknown function DUF88 [Haliangium ochraceum DSM 14365]
Length = 261
Score = 51.3 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 17/98 (17%), Positives = 30/98 (30%), Gaps = 8/98 (8%)
Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCG--------RKRVKSSMDVELAVDAFEQSE 111
+ LD + V + + G R + +D LAVD +
Sbjct: 127 YDAKRHTLDKMRRFYHAVRSSTDFIDIDERGHWKVDILRRSVQEKGIDTSLAVDMVAMLD 186
Query: 112 GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDP 149
+ V+ SGD + + + K+V V
Sbjct: 187 NYDVAVVLSGDADMIPSIEIAKNRCKQVAAVQFQQGQR 224
>gi|188992022|ref|YP_001904032.1| hypothetical protein xccb100_2627 [Xanthomonas campestris pv.
campestris str. B100]
gi|167733782|emb|CAP51987.1| Hypothetical protein xcc-b100_2627 [Xanthomonas campestris pv.
campestris]
Length = 266
Score = 51.3 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 19/55 (34%), Gaps = 5/55 (9%)
Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165
+ + + D F+ L L+ + V IV D LR D F +
Sbjct: 94 HRADTFCLVTSDSDFSYLCRKLRERGATVFIVG-----EPKTPDALRNACDQFFE 143
>gi|298674395|ref|YP_003726145.1| hypothetical protein Metev_0431 [Methanohalobium evestigatum
Z-7303]
gi|298287383|gb|ADI73349.1| protein of unknown function DUF88 [Methanohalobium evestigatum
Z-7303]
Length = 178
Score = 50.9 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 30/170 (17%), Positives = 58/170 (34%), Gaps = 40/170 (23%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAI----VIRAYYYTTVVGDPEQQF 60
R I L +DG N+ F+++ + + ++ Y +
Sbjct: 23 RRNIGLLVDGPNV----LRKEFNVNLEAIRDVLKEYGNVKIGLVFLNQYAS--------- 69
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVI 118
L++ + NGF+ V S +DV LAV+ E ++ + +
Sbjct: 70 ---EKLVEAIENNGFEPVI--------------CSSDVDVRLAVEGTEMVCNPNIDTITL 112
Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
+ D F L+ + K+ + + S L+ ADY + L
Sbjct: 113 VTRDADFKPLLNKANKHGKE----TILFGVEPGFSPALKNSADYVIMLNT 158
>gi|227329498|ref|ZP_03833522.1| hypothetical protein PcarcW_19989 [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 241
Score = 50.9 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 35/180 (19%), Positives = 59/180 (32%), Gaps = 32/180 (17%)
Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+EKIA+FID N A ID K+L +V Y + L
Sbjct: 3 DKEKIAVFIDADN------APAKKID--KVLSELARYGVVNIRKAY------GNWKNQNL 48
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAF--EQSEGLEHLVIFSG 121
D L + + ++F G+ D+ LA+D ++ ++ + + S
Sbjct: 49 KAWEDVL----HEFAIQPIQQFDLTKGKNAT----DMALAIDVMDVLYTKNVDVICLVSS 100
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY---LKNEIARDPD 178
D FT LV K V + + F+ L ++ I +
Sbjct: 101 DCDFTPLVTRALADGKFVIGFGERKAPVAFV-----NSCSRFLYLDDEIGIEQPIQKQSR 155
>gi|168698676|ref|ZP_02730953.1| hypothetical cytosolic protein [Gemmata obscuriglobus UQM 2246]
Length = 207
Score = 50.9 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 55/134 (41%), Gaps = 21/134 (15%)
Query: 48 YYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSS---------- 97
Y+T G+ H L LH+ + + K K + R+R K++
Sbjct: 73 YFTAFTGNDN-VLHDAHVYLRSLHFEPY--IIKEDKGLRD---RRRSKANDAGVIEKPKG 126
Query: 98 MDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQ 155
D+ LAV E + + + + +F+ D + ++ A++R K V + ++ + +
Sbjct: 127 ADIALAVRMIEDAVLDNYQIVGLFTSDADYLPVIKAVRRMGKYVVVYGF---KENLGNPE 183
Query: 156 LRRQADYFMDLAYL 169
L D F+DL
Sbjct: 184 LEYVPDEFVDLGSY 197
>gi|119486459|ref|ZP_01620517.1| hypothetical protein L8106_00655 [Lyngbya sp. PCC 8106]
gi|119456361|gb|EAW37492.1| hypothetical protein L8106_00655 [Lyngbya sp. PCC 8106]
Length = 428
Score = 50.9 bits (121), Expect = 7e-05, Method: Composition-based stats.
Identities = 38/169 (22%), Positives = 63/169 (37%), Gaps = 27/169 (15%)
Query: 8 IALFIDGANL---YASSKALGFDIDYRKLLKAFRSRAIVIRAYYYT---TVVGDPEQQFS 61
+A+F D NL Y SS+ I+ L F + R + + + S
Sbjct: 5 VAIFYDIENLLKGYGSSQNY---INSISLKYVFNKIKSIERVEFIAVQRAYANWSDPRLS 61
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVI 118
+ ++ L + Q+ R K++ D++LAVDA + + +E VI
Sbjct: 62 VMKGEINELGIDPIQIF---------GFSRNTHKNAADIQLAVDAIDLAYLRNYIEIFVI 112
Query: 119 FSGDGCFTTLVAALQRKVKKV-TIVSTVLSDPSMASDQLRRQADYFMDL 166
SGDG F+ L L K V ++ S D F+ +
Sbjct: 113 VSGDGGFSALAKKLHEYGKYVIGCAYFNATNKIFES-----VCDVFIGI 156
>gi|262182985|ref|ZP_06042406.1| hypothetical protein CaurA7_03252 [Corynebacterium aurimucosum ATCC
700975]
Length = 362
Score = 50.9 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 41/124 (33%), Gaps = 14/124 (11%)
Query: 40 RAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMD 99
+ R Y+Y + ++ + D G Q+ E+ G +R + ++D
Sbjct: 7 GNRIHRQYWYDGIPDTGPHRYQRALRVCD-----GVQLRTGQLIEW----GERRTQKAVD 57
Query: 100 VELAVDAF--EQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLR 157
L D + V+ SGD V +V + SM+S LR
Sbjct: 58 TRLVADMIVSAMKGQVTDFVLVSGDADMIPGVQEAVNNGVRVHLYGF--GWDSMSS-ALR 114
Query: 158 RQAD 161
D
Sbjct: 115 HACD 118
>gi|218888135|ref|YP_002437456.1| hypothetical protein DvMF_3051 [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218759089|gb|ACL09988.1| protein of unknown function DUF88 [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 418
Score = 50.9 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 35/166 (21%), Positives = 61/166 (36%), Gaps = 35/166 (21%)
Query: 8 IALFIDGANLYASSKALGFDI------DYRKLLKAFRS-----------RAIVIRAYYYT 50
AL++D N+Y+ + DI + ++ +K R +++ Y
Sbjct: 12 AALYVDFDNIYSRLREQDEDIARAFATNPQRWVKWIEGHALRMLYGDGVRRRILKRICYM 71
Query: 51 TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVD---AF 107
Q F P FQVV + K+S D+ L +D A
Sbjct: 72 -----NPQCFHEFRPFF---IRAAFQVVDCP-------PLTNQGKTSADIHLVMDCMDAL 116
Query: 108 EQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMAS 153
S + +I SGD FT L+ LQ ++ ++S + P+ +
Sbjct: 117 NHSTRFDEFIILSGDADFTPLLIRLQEHARRPLVLSVGYTSPAYTA 162
>gi|306834717|ref|ZP_07467784.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49726]
gi|304569388|gb|EFM44886.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49726]
Length = 384
Score = 50.9 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 29/172 (16%), Positives = 55/172 (31%), Gaps = 29/172 (16%)
Query: 6 EKIALFIDGANL---YA----SSKALGFDIDYRKLLK------AFRSRAIVIRAYYYTTV 52
E+ +F+D + L + + +ID +++ + + R Y+Y +
Sbjct: 3 ERTLVFVDTSYLLASFYNSWETGARAQLEIDLPEVVSTMGGMIEEQLGNPIQRQYWYDGI 62
Query: 53 VGDPEQQFSPLHPLLDWLHYN-GFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS- 110
+ H L G Q+ E+ G +R + +D L D +
Sbjct: 63 PD------TGPHRYQRALRTCEGVQLRTGQLIEW----GERRTQKGVDTRLVADMVMAAV 112
Query: 111 -EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
V+ SGD +V + SM++ LR D
Sbjct: 113 KNQFTDFVLVSGDADMIPGAQTAVDNGIRVHLYGF--GWDSMSA-ALRHTCD 161
>gi|116671901|ref|YP_832834.1| hypothetical protein Arth_3359 [Arthrobacter sp. FB24]
gi|116612010|gb|ABK04734.1| conserved hypothetical protein [Arthrobacter sp. FB24]
Length = 404
Score = 50.9 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 36/194 (18%), Positives = 63/194 (32%), Gaps = 36/194 (18%)
Query: 1 MFDPREKIA-LFIDGANLYASS------KALG--FDIDYRKLLKAF------RSRAIVIR 45
M + + +FID L A+ +L F + Y+ L+ R ++R
Sbjct: 7 MLQSMSRKSVIFIDAGFLLATGGLRVTGNSLRSAFSVQYKSLVDGIQGFVSERDSRDLLR 66
Query: 46 AYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVD 105
Y+Y D G KV G ++ +D++L +D
Sbjct: 67 MYWYDAAKDG---------LFSDEHKRIGLLPGVKVRLGRMSYNGEQK---GVDLKLGLD 114
Query: 106 AFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM----ASDQLRRQ 159
+ + + SGD V A Q KV ++ + ++ L Q
Sbjct: 115 LVGVARNRSADVAYLLSGDDDLAEAVEAAQDLGMKVVLLGIENQGHRLGVTAVAEHLALQ 174
Query: 160 ADYFMDLAYLKNEI 173
D D+A L +
Sbjct: 175 VD---DIATLPQTL 185
>gi|78047256|ref|YP_363431.1| hypothetical protein XCV1700 [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|78035686|emb|CAJ23377.1| conserved hypothetical protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 266
Score = 50.9 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 19/55 (34%), Gaps = 5/55 (9%)
Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165
+ + + D F+ L L+ + V IV D LR D F +
Sbjct: 94 SRADTFCLVTSDSDFSYLCRKLRERGATVFIVG-----EPKTPDALRNACDQFFE 143
>gi|269128328|ref|YP_003301698.1| hypothetical protein Tcur_4132 [Thermomonospora curvata DSM 43183]
gi|268313286|gb|ACY99660.1| protein of unknown function DUF88 [Thermomonospora curvata DSM
43183]
Length = 333
Score = 50.9 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 33/167 (19%), Positives = 60/167 (35%), Gaps = 20/167 (11%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRA-YYYTTVVGDPEQQFSPLHP 65
+ A+F+D LYA+S AL LL A R + A ++ ++
Sbjct: 12 RYAVFVDAGYLYAASGAL--------LLDATSRREYRVAAEQLINALIDYAAKELRGELL 63
Query: 66 LLDWLHYNG-------FQVVAKV--AKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LE 114
+ W +V+A + K N + + +D +L D + +
Sbjct: 64 RVYWFDAAPRRQPTVDQRVIANLPRVKLRLGNLNAQGQQKGVDAQLRADLEALARHRAIT 123
Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
V+ +GD V A QR V + + S ++ L ++D
Sbjct: 124 DAVLLAGDEDMLPAVEAAQRYGVLVHLWGVEPTHGSNQAEWLVWESD 170
>gi|330983390|gb|EGH81493.1| hypothetical protein PLA107_00070 [Pseudomonas syringae pv.
lachrymans str. M301315]
Length = 294
Score = 50.9 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 19/100 (19%), Positives = 42/100 (42%), Gaps = 7/100 (7%)
Query: 77 VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQR 134
V+ + A + + + K++ D+ + DA + ++ + S D FT LV L+
Sbjct: 66 VLHQHAIQPVQVFDLIKGKNASDIAMCCDAMDVLYNKPVDVFCLVSSDSDFTPLVTKLRS 125
Query: 135 KVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
+ K+V V + + +F+ L + E++
Sbjct: 126 EGKQVIGVGERKAAAAFV-----DACSFFIFLDDIAAEVS 160
>gi|89070045|ref|ZP_01157376.1| hypothetical protein OG2516_09755 [Oceanicola granulosus HTCC2516]
gi|89044382|gb|EAR50520.1| hypothetical protein OG2516_09755 [Oceanicola granulosus HTCC2516]
Length = 238
Score = 50.9 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 41/110 (37%), Gaps = 8/110 (7%)
Query: 76 QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQ 133
+V A+ + K+S D+ L +DA + + V+ S D FT L + ++
Sbjct: 54 RVQAEHGIVPHHSPANTVGKNSSDISLVIDAMDLLHTGRFDGFVLISSDSDFTRLASRIR 113
Query: 134 RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI-ARDPDEDKK 182
+ V + D R+ F+ L L + + P + K
Sbjct: 114 EQGLDVYGIGQKK-----TPDAFRKACKRFIFLENLGAQTDEKAPRGEAK 158
>gi|51102980|gb|AAT96127.1| hypothetical protein [Pseudomonas viridiflava]
Length = 186
Score = 50.9 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 34/193 (17%), Positives = 69/193 (35%), Gaps = 45/193 (23%)
Query: 11 FIDGANLYASSKA--------LG----------------FDIDYRKLLKAFRSRAIVIRA 46
++D +N++ + LG +++DY L + A I
Sbjct: 11 YVDNSNVFLEGRRASAVAKKLLGAESYIEAMNNRILDNTWNLDYGLLHQFACGDAENIGG 70
Query: 47 YYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDV--ELAV 104
+ G P S H + GF+V + +N K K + + ++
Sbjct: 71 ---AKLWGSPPPSDSFWH----MVESKGFEVKT-----YEKNFAGKEKKVDVAIAHQITK 118
Query: 105 DAFE--QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162
DA+ S+G + + + +GD F +V L +V +V + P +L+
Sbjct: 119 DAYSGKISKGTDEITLVAGDKDFVPVVEDLVENGYQVHVVFWENAAP-----ELKVVCSK 173
Query: 163 FMDLAYLKNEIAR 175
F+ L + + +
Sbjct: 174 FISLNPYLDNLTK 186
>gi|169236305|ref|YP_001689505.1| hypothetical protein OE3283F [Halobacterium salinarum R1]
gi|167727371|emb|CAP14159.1| conserved hypothetical protein [Halobacterium salinarum R1]
Length = 152
Score = 50.9 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 33/155 (21%), Positives = 54/155 (34%), Gaps = 31/155 (20%)
Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
+ALF+DG N+ FD+D + + + Y PL+
Sbjct: 17 VALFVDGPNV----LRDEFDVDLDDVREIAGEVGPLAVTRLYL--------DEHATPPLI 64
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCF 125
G+ V +DV+LAVDA E +G++ L + S D F
Sbjct: 65 QAGEARGYDVRV--------------TSGDVDVKLAVDATELVLDDGVDVLAVASRDTDF 110
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160
+ +R+ + ++ SD LR A
Sbjct: 111 KPVFEQAERRGVRTLAIAPGEHGR---SDALRNAA 142
>gi|255324081|ref|ZP_05365206.1| conserved hypothetical protein [Corynebacterium tuberculostearicum
SK141]
gi|311740303|ref|ZP_07714134.1| conserved hypothetical protein [Corynebacterium pseudogenitalium
ATCC 33035]
gi|255298938|gb|EET78230.1| conserved hypothetical protein [Corynebacterium tuberculostearicum
SK141]
gi|311304686|gb|EFQ80758.1| conserved hypothetical protein [Corynebacterium pseudogenitalium
ATCC 33035]
Length = 365
Score = 50.9 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 31/172 (18%), Positives = 57/172 (33%), Gaps = 29/172 (16%)
Query: 6 EKIALFIDGANL---YA----SSKALGFDIDYRKLLK------AFRSRAIVIRAYYYTTV 52
E+ +F+D + L + + +ID +++ + + R Y+Y +
Sbjct: 3 ERTLVFVDTSYLLASFYNSWETGARAQLEIDLPEVVSTMGGMIENQLGTPIQRQYWYDGI 62
Query: 53 VGDPEQQFSPLHPLLDWLHYN-GFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS- 110
+ H L G Q+ E+ G +R + ++D L D +
Sbjct: 63 PD------TGPHRYQRALRTCEGVQLRTGQLIEW----GERRTQKAVDTRLVADMVIAAM 112
Query: 111 -EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
V+ SGD A +V + SM+S LR D
Sbjct: 113 KGQFTDFVLVSGDADMIPGAQAAVDNGIRVHLYGF--GWDSMSS-ALRHACD 161
>gi|218779797|ref|YP_002431115.1| cold-shock DNA-binding domain protein [Desulfatibacillum
alkenivorans AK-01]
gi|218761181|gb|ACL03647.1| cold-shock DNA-binding domain protein [Desulfatibacillum
alkenivorans AK-01]
Length = 409
Score = 50.9 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 29/161 (18%), Positives = 60/161 (37%), Gaps = 33/161 (20%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLL-------KAFRSR-----------AIVIRAYY 48
+I +F DG Y S + + R+ + +S+ V+ A+Y
Sbjct: 11 RIGVFYDGNFFYHVSNYYKY-VHPRRARLSVAGIHEFIKSQVAESEGVDPRYCQVVDAHY 69
Query: 49 YTTVVGDPEQQFSPL----HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAV 104
+ +G E + + + L G G + K +DV LA+
Sbjct: 70 FRGRLGAQEAEQRQVLMSERVFDEILMREGIVTHYLPL-------GARGEKG-IDVWLAL 121
Query: 105 DAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS 143
+AFE + + +V+ +GDG + L+ + ++ ++
Sbjct: 122 EAFELTVLKHFNVVVLIAGDGDYVPLIRKINTLGTRIMVLG 162
>gi|312962938|ref|ZP_07777425.1| protein of unknown function DUF88 [Pseudomonas fluorescens WH6]
gi|311282965|gb|EFQ61559.1| protein of unknown function DUF88 [Pseudomonas fluorescens WH6]
Length = 246
Score = 50.5 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 29/160 (18%), Positives = 52/160 (32%), Gaps = 29/160 (18%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
++A+ ID N +S ++LL+ Y L
Sbjct: 17 RLAVLIDADNASSSVV--------KELLEEVAKYGTATVKRAY---------GDWTTQHL 59
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124
+ W + K A + + + K+S D +DA + ++ ++ I S D
Sbjct: 60 VGWKGHL-----HKHAIQPIQQFAYTQGKNSTDSAFIIDAMDLLYADNVDGFCIVSSDSD 114
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
FT L L+ K+V + D D F+
Sbjct: 115 FTRLATRLREAGKRVYGLGERK-----TPDAFIGACDKFI 149
>gi|21223533|ref|NP_629312.1| hypothetical protein SCO5164 [Streptomyces coelicolor A3(2)]
gi|289769257|ref|ZP_06528635.1| conserved hypothetical protein [Streptomyces lividans TK24]
gi|9714449|emb|CAC01365.1| hypothetical protein [Streptomyces coelicolor A3(2)]
gi|289699456|gb|EFD66885.1| conserved hypothetical protein [Streptomyces lividans TK24]
Length = 301
Score = 50.5 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 35/186 (18%), Positives = 65/186 (34%), Gaps = 31/186 (16%)
Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53
A+F+D LYA++ L FD+D L++A RA ++R Y+Y
Sbjct: 37 AIFVDAGYLYAAAGRLVAGTEDRRAFDLDAEGLIEALIDRARNIFADSRLLRVYWY---D 93
Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
G + + + L K N + +D + D +
Sbjct: 94 GARRRIHTAEQQSIAELP---------DVKVRLGNLNANNQQKGVDSLIRTDLESLARHR 144
Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169
+ + GD + V A Q +V + + ++ L + D +DL +
Sbjct: 145 AISDAALLGGDEDLVSAVEAAQGFGARVHLWGIEAPEGRNQAEPLLWEVDSQRTLDLDFF 204
Query: 170 KNEIAR 175
K ++R
Sbjct: 205 KPYVSR 210
>gi|256785360|ref|ZP_05523791.1| hypothetical protein SlivT_12796 [Streptomyces lividans TK24]
Length = 298
Score = 50.5 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 35/186 (18%), Positives = 65/186 (34%), Gaps = 31/186 (16%)
Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53
A+F+D LYA++ L FD+D L++A RA ++R Y+Y
Sbjct: 34 AIFVDAGYLYAAAGRLVAGTEDRRAFDLDAEGLIEALIDRARNIFADSRLLRVYWY---D 90
Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
G + + + L K N + +D + D +
Sbjct: 91 GARRRIHTAEQQSIAELP---------DVKVRLGNLNANNQQKGVDSLIRTDLESLARHR 141
Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169
+ + GD + V A Q +V + + ++ L + D +DL +
Sbjct: 142 AISDAALLGGDEDLVSAVEAAQGFGARVHLWGIEAPEGRNQAEPLLWEVDSQRTLDLDFF 201
Query: 170 KNEIAR 175
K ++R
Sbjct: 202 KPYVSR 207
>gi|110668763|ref|YP_658574.1| hypothetical protein HQ2865A [Haloquadratum walsbyi DSM 16790]
gi|109626510|emb|CAJ52972.1| conserved hypothetical protein [Haloquadratum walsbyi DSM 16790]
Length = 219
Score = 50.5 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 31/168 (18%), Positives = 56/168 (33%), Gaps = 31/168 (18%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
+ LF+DG N+ FD+D + A Y
Sbjct: 10 QSNRSVGLFVDGPNV----LREEFDVDLDDVRTAAEQFGRPAIRRLYL--------DEHA 57
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFS 120
L+ GF+V+ + +DV L+VD + + + + + I S
Sbjct: 58 PSGLIQAAESRGFEVIV--------------TSTDVDVRLSVDLTKAAVTDTADIIAIVS 103
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
D F + A ++ +++ ++ SD LR AD + L
Sbjct: 104 RDADFKPAIEAANSHDRRTVVIAPGVNGR---SDALRNAADTQITLGE 148
>gi|22299967|ref|NP_683214.1| hypothetical protein tll2424 [Thermosynechococcus elongatus BP-1]
gi|22296152|dbj|BAC09976.1| tll2424 [Thermosynechococcus elongatus BP-1]
Length = 620
Score = 50.5 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 34/182 (18%), Positives = 66/182 (36%), Gaps = 19/182 (10%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGD---PEQQFSPL 63
K A+ D NL + G +D K+ S ++ + T +G+ +
Sbjct: 160 KTAVLYDIENLVFNQ---GQRLDPAKV-NELVSLDKILESIKSTIDLGEIAIKRAYGNWQ 215
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGL---EHLVIFS 120
+ L L+ + + + N ++ D++LA+DA + V+ S
Sbjct: 216 NKTLQALNDQLKRSQIQPVSVYGHNRDQRNA---ADIQLALDAIDLIHHYPDINTFVLIS 272
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
GDG F ++ L+ K V + + AS ++ F+ L I P +
Sbjct: 273 GDGGFGSIALRLRDYGKTVIGCAYWNA----ASLSFQKVCHQFIFLEN--PFIDSPPTTN 326
Query: 181 KK 182
+
Sbjct: 327 GR 328
>gi|219667461|ref|YP_002457896.1| hypothetical protein Dhaf_1404 [Desulfitobacterium hafniense DCB-2]
gi|219537721|gb|ACL19460.1| protein of unknown function DUF88 [Desulfitobacterium hafniense
DCB-2]
Length = 296
Score = 50.5 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/146 (15%), Positives = 54/146 (36%), Gaps = 13/146 (8%)
Query: 11 FIDGANLYASSKALGFDIDYRKLLKAFR---SRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
FID N++ G+++ L+++ + + + + Y D E+ +
Sbjct: 28 FIDYENIWTGLFEQGYELTPEILMESIQLYAKQNDYVLSAIYLYANFDREEFWRAQTSFE 87
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA----FEQSEGLEHLVIFSGDG 123
V + +++ DVEL ++A ++ + ++ +GDG
Sbjct: 88 K------IHVYTRHVYGKNNFASTGLRRNAADVELILEAQEILLTRTATFDVFLLLTGDG 141
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDP 149
F L+ ++ K V ++ S
Sbjct: 142 DFLPLLRKVRAWGKDVKVIGVKGSMH 167
>gi|218529118|ref|YP_002419934.1| hypothetical protein Mchl_1107 [Methylobacterium chloromethanicum
CM4]
gi|218521421|gb|ACK82006.1| conserved hypothetical protein [Methylobacterium chloromethanicum
CM4]
Length = 246
Score = 50.5 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 35/187 (18%), Positives = 70/187 (37%), Gaps = 19/187 (10%)
Query: 4 PREKIALFIDGANLYASSKALGFDI----DYRKLLKAF--RSRAIVIRAYYYTTVVGDPE 57
R + AL+IDG NLY S LG ++ KL ++ R ++R + T
Sbjct: 10 SRIRAALYIDGFNLYHSVNDLGESFLKWCNFWKLGESIIPRQSEELVRVVFCTAYYPGDH 69
Query: 58 QQFSPLHPLLDWLHYNGFQVVA-----KVAKEFTENCGRKR-VKSSMDVELAVDAFEQS- 110
+ L+ L G + + + AK ++ + + D+ LA+ ++ +
Sbjct: 70 SKKIRHERLVRALKLVGVETILGHFSKEDAKCRDCGSAWQKPTEKATDINLALSVYDDAV 129
Query: 111 -EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMA-SDQLRRQADYFMDLAY 168
+ ++ + + D ++ K +VS S P S + + + L
Sbjct: 130 QDAMDTAYLLTADTDQAATAELFAKRFPKKKLVSV--SPPGRTHSQHILSHTPHKIALN- 186
Query: 169 LKNEIAR 175
+ I R
Sbjct: 187 -REHIER 192
>gi|328884857|emb|CCA58096.1| hypothetical protein SVEN_4810 [Streptomyces venezuelae ATCC 10712]
Length = 322
Score = 50.5 bits (120), Expect = 9e-05, Method: Composition-based stats.
Identities = 31/188 (16%), Positives = 64/188 (34%), Gaps = 31/188 (16%)
Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53
A+F+D ++A++ L FD+D L++AF +A ++R Y+Y
Sbjct: 58 AIFVDAGYVHAAAGLLVAGTEDRRSFDLDAEGLIEAFIDKARTIFADSRLLRVYWY---- 113
Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
+ P + K N + +D + D +
Sbjct: 114 --DGARRRIHTPEQQAIAELP------DVKVRLGNLNANNQQKGVDSLIRTDLESLARHR 165
Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169
+ + GD + V A Q +V + ++ ++ L + D +L +
Sbjct: 166 AISDAALVGGDEDLVSAVEAAQGYGARVHLWGIEAAEGRNQAEALLWEVDSQRTFELDFC 225
Query: 170 KNEIARDP 177
+ + R P
Sbjct: 226 RPYVTRRP 233
>gi|241765008|ref|ZP_04763004.1| protein of unknown function DUF88 [Acidovorax delafieldii 2AN]
gi|241365405|gb|EER60198.1| protein of unknown function DUF88 [Acidovorax delafieldii 2AN]
Length = 358
Score = 50.5 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 54/140 (38%), Gaps = 32/140 (22%)
Query: 9 ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAI-VIRAYYYTTVVGDPEQQFSPLHPLL 67
A+FID NL ++ +D+ +L R RA V+ Y V L +
Sbjct: 17 AVFIDADNLNEATA-----LDH--VLTDLRHRAERVLYKRAYGRVD--------SLKGIE 61
Query: 68 DWLHYNGFQVVAKVA--KEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDG 123
L +G + V+ + K T++ L +DA E + ++ + I SGD
Sbjct: 62 SVLWRHGVRPVSNMIVNKVTTDSA------------LVIDAVEAVCTQDIDTVAICSGDA 109
Query: 124 CFTTLVAALQRKVKKVTIVS 143
F L ++ + V S
Sbjct: 110 DFVPLATWVRERGCHVLCFS 129
>gi|295133849|ref|YP_003584525.1| hypothetical protein ZPR_2004 [Zunongwangia profunda SM-A87]
gi|294981864|gb|ADF52329.1| conserved hypothetical protein [Zunongwangia profunda SM-A87]
Length = 246
Score = 50.5 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 43/108 (39%), Gaps = 10/108 (9%)
Query: 77 VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQR 134
V+ + A + G + K++ D + +DA + S ++ + S D FT L L+
Sbjct: 52 VLLENAISPIQQYGYTQGKNATDSAMIIDAMDILYSNKVDGFCLVSSDSDFTRLATRLRE 111
Query: 135 KVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182
K+V + D D F+ L LK +D +E +
Sbjct: 112 AGKRVIGIGEKK-----TPDPFIVACDRFIYLEILK---TKDKEEQPE 151
>gi|294787818|ref|ZP_06753062.1| conserved hypothetical protein [Simonsiella muelleri ATCC 29453]
gi|294484111|gb|EFG31794.1| conserved hypothetical protein [Simonsiella muelleri ATCC 29453]
Length = 454
Score = 50.5 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/174 (20%), Positives = 60/174 (34%), Gaps = 30/174 (17%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
M +K+A+ ID N + A DI ++L+ + Y GD
Sbjct: 1 MSTSNKKLAVLIDADN----APA---DI-IDEMLEEIAKYGVASVKRIY----GDWSHGL 48
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118
S L ++ ++F G+ D+ L +DA + S + I
Sbjct: 49 SKWKATL-----LPHAII--PVQQFAYTKGKNAT----DMALVIDAMDLLYSGNFDGFCI 97
Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
S D FT L + L+ +T+ + RR D F+ + + E
Sbjct: 98 VSSDSDFTRLASRLRESG--LTVYGFGEKK---TPESFRRACDKFVYVEIFRPE 146
>gi|146291809|ref|YP_001182233.1| hypothetical protein Sputcn32_0704 [Shewanella putrefaciens CN-32]
gi|145563499|gb|ABP74434.1| protein of unknown function DUF88 [Shewanella putrefaciens CN-32]
Length = 268
Score = 50.5 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/167 (19%), Positives = 57/167 (34%), Gaps = 29/167 (17%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
+EKIA+FID N A +K + +L ++ Y +
Sbjct: 2 QNKEKIAVFIDADN--APAKK------FDVVLAELAKHGLISIRKAY------GNWKSPN 47
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
L P D L + + ++F G+ D+ L +DA + ++ ++ + + S
Sbjct: 48 LKPWEDIL----HEYAIQPIQQFDLTKGKNAS----DIALVIDAMDILYTKDIDIICLIS 99
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
D FT LV K V + + F+ L
Sbjct: 100 SDCDFTPLVTRALADGKTV----FGFGERKAPA-AFVNSCSRFLYLD 141
>gi|85717621|ref|ZP_01048561.1| hypothetical protein NB311A_09801 [Nitrobacter sp. Nb-311A]
gi|85695548|gb|EAQ33466.1| hypothetical protein NB311A_09801 [Nitrobacter sp. Nb-311A]
Length = 268
Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 67/191 (35%), Gaps = 31/191 (16%)
Query: 9 ALFIDGANLYAS----SKALGFDI--DYRKLLKAFRSRA---------IVIRAYYYTTVV 53
+F+D N+++S SK + D + L AF+ + Y V
Sbjct: 7 GIFLDFDNVFSSLFKQSKEAAREFATDPARWLGAFQGMQGSENDETSHNFVIRRCYMNPV 66
Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--- 110
G P +G++V+ + K+S D + +D +
Sbjct: 67 GRVGNSE-PFSNFRQSFVRDGWEVIDTP-------PLTNQGKTSADTHIVMDVLDSVSHY 118
Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
++ V+ + D +T LV L++ +K + + + S R D +D +
Sbjct: 119 PHVDEYVLMAADADYTPLVIRLRKHMKTTVVYAAMQ-----TSMAYRAACDSIIDERSML 173
Query: 171 NEIARDPDEDK 181
+ + +E K
Sbjct: 174 EILEQKDEETK 184
>gi|92115812|ref|YP_575541.1| hypothetical protein Nham_0180 [Nitrobacter hamburgensis X14]
gi|91798706|gb|ABE61081.1| protein of unknown function DUF88 [Nitrobacter hamburgensis X14]
Length = 254
Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 34/88 (38%), Gaps = 7/88 (7%)
Query: 84 EFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTI 141
E + + K+S D+ L +DA + + + S D FT L A L+R+
Sbjct: 66 ERRDQIRAAKGKNSADMALVIDAMDLLHDGRINGFCLVSSDSDFTNLAARLRREG----- 120
Query: 142 VSTVLSDPSMASDQLRRQADYFMDLAYL 169
S D +R D F+ L L
Sbjct: 121 ASVYGFGEKKTPDCFQRACDRFISLEGL 148
>gi|298245748|ref|ZP_06969554.1| protein of unknown function DUF88 [Ktedonobacter racemifer DSM
44963]
gi|297553229|gb|EFH87094.1| protein of unknown function DUF88 [Ktedonobacter racemifer DSM
44963]
Length = 451
Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 8/73 (10%)
Query: 98 MDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQ-RKVKKVTIVSTVLSDPSMAS 153
+D+ + +D E + V+ +GD FT + A L+ R K V +V P S
Sbjct: 238 VDLNMLMDIIETVFDRPTISTFVLMTGDKDFTRISARLKLRLNKNVIVV----GIPGTVS 293
Query: 154 DQLRRQADYFMDL 166
L A+ F+ L
Sbjct: 294 RDLISSANQFVPL 306
Score = 34.7 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Query: 6 EKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58
E IALFID N+ S + + D ++L+ R V+ A Y PE
Sbjct: 3 EDIALFIDFENIRYSMLNIQRREPDPQELIAVARRYGTVMVARAYADWSRQPEP 56
>gi|332527372|ref|ZP_08403428.1| hypothetical protein RBXJA2T_15598 [Rubrivivax benzoatilyticus JA2]
gi|332111781|gb|EGJ11761.1| hypothetical protein RBXJA2T_15598 [Rubrivivax benzoatilyticus JA2]
Length = 429
Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/173 (17%), Positives = 61/173 (35%), Gaps = 32/173 (18%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSR-----AIVIRAYYYTTVVGDPEQQFS 61
K ALF+D N+++ + L D + F + A D E++
Sbjct: 2 KSALFVDFDNVFSQLRQLQPD-----AAERFARHPSEWIGWLTSALALPEPHEDGERRRL 56
Query: 62 PLHP----------LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELA---VDAFE 108
+ GF++V + K+S D+ + VD +
Sbjct: 57 LVRRCYLNPNWYQTYRHAFLRAGFEIVDCPPV-------TSQGKTSTDIHMVLDIVDLLQ 109
Query: 109 QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTI--VSTVLSDPSMASDQLRRQ 159
+ ++FS D FT ++ L+R ++ T+ + + ++D L +
Sbjct: 110 HETRCDEFIVFSADADFTPVLRKLRRYDRRTTVLAIGFPSAAYQASADLLIDE 162
>gi|291276906|ref|YP_003516678.1| hypothetical protein HMU06860 [Helicobacter mustelae 12198]
gi|290964100|emb|CBG39944.1| Putative hypothetical protein [Helicobacter mustelae 12198]
Length = 233
Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 54/139 (38%), Gaps = 17/139 (12%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
D KIALF+D N+ ++K R++ + S V Y +P
Sbjct: 2 DKERKIALFLDCENV--AAKWA------REIFERLESIGDVCIKKAY---GDWRNDALNP 50
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFS 120
+ L ++ + N G K+S D+++++D + ++ +VI S
Sbjct: 51 WNAELIQYAIEPIHIIT--GNHYKNNQGSG--KNSCDIKISIDIMNCLYDKIVDCIVIVS 106
Query: 121 GDGCFTTLVAALQRKVKKV 139
D F L ++ K +V
Sbjct: 107 SDSDFAPLAQEIRSKGLQV 125
>gi|282865441|ref|ZP_06274493.1| hypothetical protein SACTEDRAFT_5038 [Streptomyces sp. ACTE]
gi|282559914|gb|EFB65464.1| hypothetical protein SACTEDRAFT_5038 [Streptomyces sp. ACTE]
Length = 303
Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/187 (17%), Positives = 60/187 (32%), Gaps = 29/187 (15%)
Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
A+F+D +YA++ L FD+D L++AF +A I A
Sbjct: 40 AIFVDAGYVYAAAGLLVTGTEDRRSFDLDAEGLIEAFIDKARTIFA-----------DSR 88
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTE------NCGRKRVKSSMDVELAVDAFEQSEG-- 112
D V + E + N + +D + D +
Sbjct: 89 LLRVYWYDGARRRIHTVEQQSIAELPDVKVRLGNLNANNQQKGVDSLIRSDLESLARHRA 148
Query: 113 LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYLK 170
+ + GD + V A Q +V + + ++ L + D DL + +
Sbjct: 149 ISDAALVGGDEDLVSAVEAAQGYGARVHLWGIEAGEGRNQAEPLLWEVDSQRTFDLDFCR 208
Query: 171 NEIARDP 177
+ R P
Sbjct: 209 PYVTRRP 215
>gi|319791586|ref|YP_004153226.1| hypothetical protein Varpa_0897 [Variovorax paradoxus EPS]
gi|315594049|gb|ADU35115.1| protein of unknown function DUF88 [Variovorax paradoxus EPS]
Length = 273
Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 55/138 (39%), Gaps = 26/138 (18%)
Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
+A+FID NL ++ +D+ L + ++ Y G PE L +
Sbjct: 15 LAVFIDADNLNDATA-----LDHVLLALRPMADRVI-----YRRAYGRPE----SLKAIH 60
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCF 125
L +G + VA + + K++ D L +DA E ++ + I SGD F
Sbjct: 61 AVLWRHGVRPVANLIVD----------KTTTDSALVIDAVEAVCTNDIDIVAICSGDADF 110
Query: 126 TTLVAALQRKVKKVTIVS 143
L L+ K +V S
Sbjct: 111 VPLALWLREKGCRVLCYS 128
>gi|291437417|ref|ZP_06576807.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
gi|291340312|gb|EFE67268.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
Length = 319
Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/186 (18%), Positives = 63/186 (33%), Gaps = 31/186 (16%)
Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAIVIRA-------YYYTTVV 53
A+F+D LYA++ L FD+D L+ A RA + A Y+Y
Sbjct: 56 AIFVDAGYLYAAAGRLVAGTEDRRAFDLDAEGLIDALIDRARTVFADSRLLRVYWY---D 112
Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
G + + + L K N + +D + D +
Sbjct: 113 GARRRIHTAEQQSIAELP---------DVKVRLGNLNANNQQKGVDSLIRTDLESLARHR 163
Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169
+ + GD + V A Q +V + + ++ L + D +DL +
Sbjct: 164 AISDAALLGGDEDLVSAVEAAQGYGARVHLWGIEAPEGRNQAEPLLWEVDSQRTLDLDFF 223
Query: 170 KNEIAR 175
K ++R
Sbjct: 224 KPYVSR 229
>gi|121596033|ref|YP_987929.1| hypothetical protein Ajs_3744 [Acidovorax sp. JS42]
gi|120608113|gb|ABM43853.1| protein of unknown function DUF88 [Acidovorax sp. JS42]
Length = 287
Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/175 (20%), Positives = 52/175 (29%), Gaps = 31/175 (17%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
M + + +IAL ID N A ID ++L + + Y
Sbjct: 1 MAERQLRIALLIDADN------APADKID--EILTELSTLGEINVRRAYGNWTKS----- 47
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSM-DVELAVDAFEQ--SEGLEHLV 117
G+Q + + D+ + VDA E SE +
Sbjct: 48 ----------GLGGWQQRLLEFAIRPIQQFDYSKRKNATDMAMTVDAMELLYSERPDAFG 97
Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
I S D FT LV L+ K V + F+ L L +E
Sbjct: 98 IVSSDADFTPLVMHLRAKGSAVYGFGAAQTPKPFV-----NACSRFLYLESLVSE 147
>gi|255065206|ref|ZP_05317061.1| conserved hypothetical protein [Neisseria sicca ATCC 29256]
gi|255050627|gb|EET46091.1| conserved hypothetical protein [Neisseria sicca ATCC 29256]
Length = 390
Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/177 (20%), Positives = 60/177 (33%), Gaps = 30/177 (16%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
+K+A+ ID N + A DI +LL+ I Y GD S
Sbjct: 6 NKKLAVLIDADN----APA---DI-IDRLLEEVAKYGIASVKRIY----GDWSHGLSKWK 53
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122
L ++ ++F G+ D+ L +DA + S + I S D
Sbjct: 54 AAL-----LPHAII--PVQQFAYTKGKNAT----DMALVIDAMDLLYSGNFDGFCIVSSD 102
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
FT L + L+ +T+ + R+ D F+ + E R E
Sbjct: 103 SDFTRLASRLRESG--LTVYGFGEKK---TPEAFRKACDKFIYTEIFRPEKQRQEKE 154
>gi|182436154|ref|YP_001823873.1| hypothetical protein SGR_2361 [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|178464670|dbj|BAG19190.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
NBRC 13350]
Length = 303
Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/188 (16%), Positives = 63/188 (33%), Gaps = 31/188 (16%)
Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53
A+F+D +YA++ L FD+D L++AF +A ++R Y+Y
Sbjct: 40 AIFVDAGYVYAAAGLLVTGTEDRRSFDLDAEGLIEAFIDKARTIFADSRLLRVYWY---- 95
Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
+ + K N + +D + D +
Sbjct: 96 --DGARRRIHTTEQQAIAELP------DVKVRLGNLNANNQQKGVDSLIRTDLESLARHR 147
Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169
+ + GD + V A Q +V + ++ ++ L + D +L +
Sbjct: 148 AISDAALVGGDEDLVSAVEAAQGYGARVHLWGIEAAEGRNQAEPLLWEVDSQRTFELDFC 207
Query: 170 KNEIARDP 177
+ + R P
Sbjct: 208 RPYVTRRP 215
>gi|152965451|ref|YP_001361235.1| hypothetical protein Krad_1483 [Kineococcus radiotolerans SRS30216]
gi|151359968|gb|ABS02971.1| hypothetical protein Krad_1483 [Kineococcus radiotolerans SRS30216]
Length = 259
Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 40/114 (35%), Gaps = 12/114 (10%)
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
L ++ L G+ V A+ ++ ++ +A + S L +V+ SG
Sbjct: 77 SLRGWIEALRSFGYAVFARPKVHPEDDVDDAMLQ-----HIA--SRRASHRLRRVVVASG 129
Query: 122 DG-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
DG F + L R +V ++S L F+DL +
Sbjct: 130 DGRNFLAPLEELHRAGVRVVVLSFAEVAGYAQESPLI----EFVDLEDVPGAFQ 179
>gi|257068962|ref|YP_003155217.1| hypothetical protein Bfae_18070 [Brachybacterium faecium DSM 4810]
gi|256559780|gb|ACU85627.1| Protein of unknown function DUF88 [Brachybacterium faecium DSM
4810]
Length = 335
Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/199 (17%), Positives = 63/199 (31%), Gaps = 26/199 (13%)
Query: 3 DPREKIALFIDGANLYAS--SKALGFDIDYRKLLKAFRSRA-------IVIRAYYYTTVV 53
++A+++D N+ S + G Y + + + +A V
Sbjct: 4 SQDPRVAVYLDFDNIVMSWYDRVHGRQA-YSRDRQRIAEDPTEPEIAERLAKATVDVGAV 62
Query: 54 GDPEQQFSPL---HPLLDWLHYNGFQVVAKVAKEFTE----NCGRKRVKSSMDVELAVDA 106
D F L DW +++ + K+ D+ LAVD
Sbjct: 63 IDYAASFGSLMLTRAYADWSSPVNAIYRSQLVARAVDLVQLFPAAAYAKNGADIRLAVDT 122
Query: 107 FE---QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163
E L H+VI +GD + L +R + V + + L D F
Sbjct: 123 VEDLYLMPDLTHVVIVAGDSDYVPLAQRCRRLGRYV----IAMGVAGSTAKSLAAACDEF 178
Query: 164 MDLAYLKNEIARDPDEDKK 182
L + R P + ++
Sbjct: 179 ESYENLPG-VER-PTKPQR 195
>gi|326776780|ref|ZP_08236045.1| Domain of unknown function DUF88 protein [Streptomyces cf. griseus
XylebKG-1]
gi|326657113|gb|EGE41959.1| Domain of unknown function DUF88 protein [Streptomyces cf. griseus
XylebKG-1]
Length = 303
Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/188 (16%), Positives = 63/188 (33%), Gaps = 31/188 (16%)
Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53
A+F+D +YA++ L FD+D L++AF +A ++R Y+Y
Sbjct: 40 AIFVDAGYVYAAAGLLVTGTEDRRSFDLDAEGLIEAFIDKARTIFADSRLLRVYWY---- 95
Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
+ + K N + +D + D +
Sbjct: 96 --DGARRRIHTTEQQAIAELP------DVKVRLGNLNANNQQKGVDSLIRTDLESLARHR 147
Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169
+ + GD + V A Q +V + ++ ++ L + D +L +
Sbjct: 148 AISDAALVGGDEDLVSAVEAAQGYGARVHLWGIEAAEGRNQAEPLLWEVDSQRTFELDFC 207
Query: 170 KNEIARDP 177
+ + R P
Sbjct: 208 RPYVTRRP 215
>gi|323359351|ref|YP_004225747.1| hypothetical protein MTES_2903 [Microbacterium testaceum StLB037]
gi|323275722|dbj|BAJ75867.1| uncharacterized conserved protein [Microbacterium testaceum
StLB037]
Length = 286
Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 45/139 (32%), Gaps = 20/139 (14%)
Query: 28 IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTE 87
ID ++ S ++ Y ++ Q+VA+
Sbjct: 57 IDVGAVIDYAASFGTLVLTRAYADWSAPVNAEYRS-------------QLVARAVDLVQL 103
Query: 88 NCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVST 144
K+ D+ LAVDA E L H+VI +GD + L +R + V V
Sbjct: 104 FPAAAYAKNGADIRLAVDAVEDMFRLPDLTHVVIVAGDSDYVPLAQRCKRLGRYVVGVGV 163
Query: 145 VLSDPSMASDQLRRQADYF 163
S + L D F
Sbjct: 164 AGS----TAKSLAAACDRF 178
>gi|167746693|ref|ZP_02418820.1| hypothetical protein ANACAC_01404 [Anaerostipes caccae DSM 14662]
gi|167653653|gb|EDR97782.1| hypothetical protein ANACAC_01404 [Anaerostipes caccae DSM 14662]
Length = 351
Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/184 (19%), Positives = 63/184 (34%), Gaps = 33/184 (17%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRK-LLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
M + ++ AL ID N+ S+K Y K +L + Y
Sbjct: 1 MENKEKRFALLIDADNI--SAK-------YIKPILDELSQYGNITYKRIY-------GDW 44
Query: 60 FSPLH-PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHL 116
S LH + L N ++F+ G+ D + +DA + + ++
Sbjct: 45 TSTLHASWKEELLANSIT----PIQQFSYTQGKNAT----DSAMIIDAMDILYTNRVDGF 96
Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
I S D FT L + ++ V + + P+ R+ D F +L L +
Sbjct: 97 CIVSSDSDFTRLASRIRETGLTVIGMGEGKTPPAF-----RKACDVFTNLELLIEDKEEK 151
Query: 177 PDED 180
+
Sbjct: 152 ESKP 155
>gi|260804479|ref|XP_002597115.1| hypothetical protein BRAFLDRAFT_76354 [Branchiostoma floridae]
gi|229282378|gb|EEN53127.1| hypothetical protein BRAFLDRAFT_76354 [Branchiostoma floridae]
Length = 555
Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/150 (19%), Positives = 59/150 (39%), Gaps = 35/150 (23%)
Query: 5 REKIALFIDGANLYASSKAL-------------GFDIDYRKLLKAFRSRAI-----VIRA 46
E + +F+D +N++ + K I+Y L S+ + A
Sbjct: 160 NEGLHVFVDDSNIWIAGKRAAVKQKDLACDEDPRLRIEYGNFLDVLSSKERQTSSVIKIA 219
Query: 47 YYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA 106
Y ++ + L D + G++V KE ++ G+++ +D +L VDA
Sbjct: 220 NMYGSIPPPND-------SLWDKMKEKGWKV---DLKERSKITGKEKA---VDAQLMVDA 266
Query: 107 FE-QSEGLE---HLVIFSGDGCFTTLVAAL 132
++ + +V+ SGD F L+ +
Sbjct: 267 ISFAAQRKDAGGTIVLISGDKDFLPLINKV 296
>gi|297157475|gb|ADI07187.1| hypothetical protein SBI_04066 [Streptomyces bingchenggensis BCW-1]
Length = 310
Score = 50.1 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 66/189 (34%), Gaps = 31/189 (16%)
Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53
A+F+D +YA++ L F++D L++AF +A ++R Y+Y
Sbjct: 41 AIFVDAGYVYAAAGRLVAGTEDRRTFELDAEGLIEAFIDKARTIFPDSRLLRVYWY---D 97
Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
G + + + L K N + +D + D +
Sbjct: 98 GARRRIHTSEQQSIAELP---------DVKVRLGNLNANNQQKGVDSLIRSDLESLARHR 148
Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169
+ V+ GD + V A Q +V + + ++ L + D DL +
Sbjct: 149 AIGDAVLIGGDEDLVSAVEAAQGYGARVHLWGIEAVEGRNQAEPLLWEVDSQRTFDLDFC 208
Query: 170 KNEIARDPD 178
K + R P
Sbjct: 209 KPYVTRRPA 217
>gi|326204799|ref|ZP_08194653.1| protein of unknown function DUF88 [Clostridium papyrosolvens DSM
2782]
gi|325985011|gb|EGD45853.1| protein of unknown function DUF88 [Clostridium papyrosolvens DSM
2782]
Length = 258
Score = 49.7 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/177 (17%), Positives = 60/177 (33%), Gaps = 31/177 (17%)
Query: 1 MFDPREKIALFIDGANL-YASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
M ++A+ ID N+ Y++ K +++ Y +
Sbjct: 1 MSPDEMRLAVLIDAENVPYSNVKG---------IMEEIARHGTPTIKRIYA------DWT 45
Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLV 117
+ + L N ++++ G K+S D + +DA + S+ +E
Sbjct: 46 KPTMSGWKNVLLENAIT----PIQQYSYTSG----KNSSDSAMIIDAMDILYSDQVEGFC 97
Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
I S D FT LV L+ KKV + + + D F + + +
Sbjct: 98 IISSDSDFTRLVTRLREAGKKVYGIGERKTPSPFIA-----ACDKFTYIEIISASLQ 149
>gi|149376066|ref|ZP_01893832.1| hypothetical protein MDG893_03770 [Marinobacter algicola DG893]
gi|149359703|gb|EDM48161.1| hypothetical protein MDG893_03770 [Marinobacter algicola DG893]
Length = 248
Score = 49.7 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/183 (19%), Positives = 62/183 (33%), Gaps = 29/183 (15%)
Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
+ +KIA+ ID N S L +++ S V+ Y
Sbjct: 4 LEQHKKIAVLIDADNAQLSKLPL--------IIEELSSHGHVVVKRAY---------GDW 46
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIF 119
+ L +W V+ ++A + + + K++ D + +DA + S + +
Sbjct: 47 SIDSLKNW-----KTVLNELAIQPIQQFAYTKGKNATDASMIIDAMDLLYSSKFDAFALV 101
Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
S D FT L + L+ I + R D F+ L+ PDE
Sbjct: 102 SSDSDFTKLASRLRES----EIYVFGFGEKK-TPVSFRSACDDFLFTENLEYPEEVAPDE 156
Query: 180 DKK 182
K
Sbjct: 157 PAK 159
>gi|261364990|ref|ZP_05977873.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996]
gi|288566793|gb|EFC88353.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996]
Length = 390
Score = 49.7 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/177 (20%), Positives = 60/177 (33%), Gaps = 30/177 (16%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
+K+A+ ID N + A DI +LL+ I Y GD S
Sbjct: 6 NKKLAVLIDADN----APA---DI-IDRLLEEVAKYGIASVKRIY----GDWSHGLSKWK 53
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122
L ++ ++F G+ D+ L +DA + S + I S D
Sbjct: 54 AAL-----LPHAII--PVQQFAYTKGKNAT----DMALVIDAMDLLYSGNFDGFCIVSSD 102
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
FT L + L+ +T+ + R+ D F+ + E R E
Sbjct: 103 SDFTRLASRLRESG--LTVYGFGEKK---TPEAFRKACDKFIYTEIFRPEKQRQEKE 154
>gi|18978412|ref|NP_579769.1| hypothetical protein PF2040 [Pyrococcus furiosus DSM 3638]
gi|18894254|gb|AAL82164.1| hypothetical protein PF2040 [Pyrococcus furiosus DSM 3638]
Length = 183
Score = 49.7 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/179 (20%), Positives = 71/179 (39%), Gaps = 32/179 (17%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
++IALF+DG N+ K LG + +++A + A Q++P
Sbjct: 26 KRIALFVDGPNILR--KELGIHL--EDIVEALSKLGNIRVAKVIL-------NQYAP-QS 73
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDG 123
L++ + GF+ V V + V++AV+A + ++ + + + +
Sbjct: 74 LIEAVSNQGFEPVI--------------VAGEIGVKMAVEAMREVYNPNIDMIALATRNT 119
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182
F ++ + K K+ I+ S L+ ADY + L +I ED +
Sbjct: 120 EFVPIILKAKEKGKETAIIGVEHGL----SSALKHAADYVIILKPRGEKIEERHHEDSE 174
>gi|269124499|ref|YP_003297869.1| hypothetical protein Tcur_0226 [Thermomonospora curvata DSM 43183]
gi|268309457|gb|ACY95831.1| protein of unknown function DUF88 [Thermomonospora curvata DSM
43183]
Length = 446
Score = 49.7 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/180 (19%), Positives = 65/180 (36%), Gaps = 33/180 (18%)
Query: 5 REKIALFIDGANL-------YASSK---ALGFDIDYRKLLKAFRSRAI------VIRAYY 48
++ ALF+D L ++ A+ + D+ LL+ + ++R Y+
Sbjct: 1 MDRCALFVDAGYLLADGAMAVHGTRHREAVSW--DFAGLLQLLSNLGRERTGLPLLRCYW 58
Query: 49 YTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE 108
Y V + SP H L L + R + +D E+ D
Sbjct: 59 YEATVEG---RRSPEHEALADL----------PGLKLRLGRIRPGRREGVDAEIQRDLMT 105
Query: 109 QSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
+ + V+ GD +VA Q +VT+V + S LR++ D +++
Sbjct: 106 LARNRAIADAVLVGGDEDMAPVVAEAQEFGVRVTVVHVAVDGNWTISRVLRQECDDLIEI 165
>gi|189462157|ref|ZP_03010942.1| hypothetical protein BACCOP_02839 [Bacteroides coprocola DSM 17136]
gi|189431130|gb|EDV00115.1| hypothetical protein BACCOP_02839 [Bacteroides coprocola DSM 17136]
Length = 213
Score = 49.7 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 54/154 (35%), Gaps = 14/154 (9%)
Query: 3 DPREKIALFIDGANLYASSKAL-GFD----IDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
+ ++++ ++IDG N Y K+ + +D KL + F + A Y + D
Sbjct: 2 EQKQRVIVYIDGFNFYFGLKSNAKWKKYYWLDIVKLFEMFMRPNQELVAVKYFSAKPDDI 61
Query: 58 QQFSPLHPLLDWLHYNG-FQVVA-KVAKEFTE-----NCGRKRVKSSMDVELAVDAFEQS 110
Q + N F+++ K K+ N + DV +A +
Sbjct: 62 DQSLRQNAFFQANRENPKFKLILGKYLKKSITCFKCGNVIHTHEEKETDVRIATQIIADA 121
Query: 111 --EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIV 142
+ + ++ S D + +KV +
Sbjct: 122 YQKNCDISIVVSADSDMIPAIELATEACQKVFVY 155
>gi|332296842|ref|YP_004438764.1| protein of unknown function DUF88 [Treponema brennaborense DSM
12168]
gi|332179945|gb|AEE15633.1| protein of unknown function DUF88 [Treponema brennaborense DSM
12168]
Length = 332
Score = 49.7 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 93 RVKSSMDVELA---VDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDP 149
K S D+ + V+ Q +E V+ +GD F L+ +L++ K+ I+ V ++
Sbjct: 72 SRKDSADMSMVAHGVELIFQYPHIESYVLITGDADFRPLLLSLRKYGKQTLIICDVKNN- 130
Query: 150 SMASDQLRRQADYFMDLAYL 169
AS+ L AD ++D +
Sbjct: 131 --ASEDLLNMADKYLDYREI 148
>gi|329847705|ref|ZP_08262733.1| hypothetical protein ABI_07730 [Asticcacaulis biprosthecum C19]
gi|328842768|gb|EGF92337.1| hypothetical protein ABI_07730 [Asticcacaulis biprosthecum C19]
Length = 145
Score = 49.7 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/164 (17%), Positives = 56/164 (34%), Gaps = 31/164 (18%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
K+AL +DG N+ G + L K + + Y P+ +
Sbjct: 4 KLALLVDGDNI-------GHQL-IAPLWKQVVTLGMPNVQRVYRDWSRGPDWKD------ 49
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGC 124
V+ K A + K++ D+ + +DA + ++ + + S D
Sbjct: 50 ----------VLLKYALQPMHQFNYAPGKNATDIAMVIDALDLAQTGLYDGFCLASSDSD 99
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
FT L L+++ KV + ++ D F+ L
Sbjct: 100 FTPLAIRLRQRGLKV--YGFGETKTPAT---FQQACDRFIILPS 138
>gi|115526363|ref|YP_783274.1| hypothetical protein RPE_4370 [Rhodopseudomonas palustris BisA53]
gi|115520310|gb|ABJ08294.1| protein of unknown function DUF88 [Rhodopseudomonas palustris
BisA53]
Length = 253
Score = 49.7 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 40/100 (40%), Gaps = 7/100 (7%)
Query: 76 QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQ 133
+++ K A + + + K++ D+ L +DA + S + + S D FT L + L+
Sbjct: 56 EILQKHAIDPYQQYAYTKGKNASDIALVIDAMDLLHSGRFDGFCLVSSDSDFTRLASRLR 115
Query: 134 RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
+ V T + R+ F+ L E+
Sbjct: 116 EQGADVYGFGTQC-----TPESFRQACRRFIYTENLLPEV 150
>gi|257063827|ref|YP_003143499.1| hypothetical protein Shel_11150 [Slackia heliotrinireducens DSM
20476]
gi|256791480|gb|ACV22150.1| uncharacterized conserved protein [Slackia heliotrinireducens DSM
20476]
Length = 314
Score = 49.7 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/165 (21%), Positives = 55/165 (33%), Gaps = 29/165 (17%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
KIAL IDG N+ S+ +G +L Y + +
Sbjct: 5 KIALLIDGDNV--SANYIG------SILDELTETGTTTIKRIY------GDWTRPEMRSW 50
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124
D L G V + ++F+ G+ D L +DA + ++ I S D
Sbjct: 51 RDQL--LGRSV--QPVQQFSNVSGKNAT----DSALIIDAMDILYGRDVDAFCIVSSDSD 102
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
FT L + L K V + D R F++L L
Sbjct: 103 FTRLASRLTESGKVV-----IGMGEEKTPDAFRNACTKFVNLENL 142
>gi|255536314|ref|YP_003096685.1| Maebl [Flavobacteriaceae bacterium 3519-10]
gi|255342510|gb|ACU08623.1| Maebl [Flavobacteriaceae bacterium 3519-10]
Length = 246
Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/188 (19%), Positives = 62/188 (32%), Gaps = 40/188 (21%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
+K+A+ ID N+ + + ++L+ Y
Sbjct: 3 DDKLAVLIDADNVPYA--------NVTQMLEEISRYGTPTIKRIYA-------------- 40
Query: 65 PLLDWLHY--NGFQ-VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIF 119
DW +G++ V+ + A + K+S D L +DA + SE + I
Sbjct: 41 ---DWTKPTVSGWKGVLLENAITPIQQYSYTTGKNSSDSALIIDAMDILYSEKVTGFCIV 97
Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE-----IA 174
S D FT L L+ V + S D F+ L LKN +
Sbjct: 98 SSDSDFTRLATRLREAGMTVIGFGEKKTPKPFIS-----ACDKFIYLEILKNTATETAVE 152
Query: 175 RDPDEDKK 182
+ + K+
Sbjct: 153 KKTAKPKR 160
>gi|14590028|ref|NP_142092.1| hypothetical protein PH0074 [Pyrococcus horikoshii OT3]
gi|3256460|dbj|BAA29143.1| 163aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 163
Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/168 (20%), Positives = 61/168 (36%), Gaps = 36/168 (21%)
Query: 8 IALFIDGANLYASSKALGFDI-DYRKLLKAFRS-RAIVIRAYYYTTVVGDPEQQFSPLHP 65
I L IDG N+ K G + D +K L+ R + Y
Sbjct: 24 IGLIIDGPNILR--KEFGIKLEDIKKALEKIGKIRVAKVVLNQYAP------------QG 69
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDG 123
L++ + GF+ + V DV +A++A E ++ + + + D
Sbjct: 70 LIEAVVNQGFEPII--------------VAGDTDVRVAIEAMELIYNTDVDVIALATRDA 115
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
F L++ +RK K+ ++ S L+ ADY + + K
Sbjct: 116 DFLPLISEAKRKGKETVVIGVEPGF----SVALQNAADYIIKMEKKKE 159
>gi|239929080|ref|ZP_04686033.1| hypothetical protein SghaA1_12721 [Streptomyces ghanaensis ATCC
14672]
Length = 297
Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/186 (18%), Positives = 63/186 (33%), Gaps = 31/186 (16%)
Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAIVIRA-------YYYTTVV 53
A+F+D LYA++ L FD+D L+ A RA + A Y+Y
Sbjct: 34 AIFVDAGYLYAAAGRLVAGTEDRRAFDLDAEGLIDALIDRARTVFADSRLLRVYWY---D 90
Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
G + + + L K N + +D + D +
Sbjct: 91 GARRRIHTAEQQSIAELP---------DVKVRLGNLNANNQQKGVDSLIRTDLESLARHR 141
Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169
+ + GD + V A Q +V + + ++ L + D +DL +
Sbjct: 142 AISDAALLGGDEDLVSAVEAAQGYGARVHLWGIEAPEGRNQAEPLLWEVDSQRTLDLDFF 201
Query: 170 KNEIAR 175
K ++R
Sbjct: 202 KPYVSR 207
>gi|153854120|ref|ZP_01995428.1| hypothetical protein DORLON_01419 [Dorea longicatena DSM 13814]
gi|149753169|gb|EDM63100.1| hypothetical protein DORLON_01419 [Dorea longicatena DSM 13814]
Length = 309
Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/167 (22%), Positives = 60/167 (35%), Gaps = 31/167 (18%)
Query: 9 ALFIDGANLYASSKALGFDIDYRK-LLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
AL ID N+ S+K Y K +L I+ Y + +
Sbjct: 7 ALLIDADNV--SAK-------YIKPILTELSKYGIITYKRIY------GDWTSTQHSSWK 51
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCF 125
D L N ++F+ G K+S D + +DA + + ++ I S D F
Sbjct: 52 DELLTNSIT----PIQQFSYTQG----KNSTDSAMIIDAMDILYTNDVDGFCIVSSDSDF 103
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
T LV+ L+ K V + + R+ D F L L +E
Sbjct: 104 TRLVSRLRESGKMVIGMGENKTPEPF-----RKACDKFTILENLMSE 145
>gi|126729949|ref|ZP_01745761.1| hypothetical protein SSE37_16263 [Sagittula stellata E-37]
gi|126709329|gb|EBA08383.1| hypothetical protein SSE37_16263 [Sagittula stellata E-37]
Length = 233
Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 47/115 (40%), Gaps = 10/115 (8%)
Query: 73 NGF-QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLV 129
NG+ +V A+ + K++ D+ L +DA + E + V+ S D FT L
Sbjct: 50 NGWSRVTAEYGLVPLHSPANTVGKNASDISLVIDAMDLMHTERFDGFVLVSSDSDFTRLA 109
Query: 130 AALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL--KNEIARDPDEDKK 182
+ ++ + V + D R+ F+ L + E ++D DK+
Sbjct: 110 SRIREQGLDVYGMGMQK-----TPDAFRKACKRFIYLENIDSAPEESKDRKTDKR 159
>gi|114564810|ref|YP_752324.1| hypothetical protein Sfri_3658 [Shewanella frigidimarina NCIMB 400]
gi|114336103|gb|ABI73485.1| protein of unknown function DUF88 [Shewanella frigidimarina NCIMB
400]
Length = 242
Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/179 (21%), Positives = 60/179 (33%), Gaps = 36/179 (20%)
Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
++KIA+FID N A ID K+L +V Y + + L
Sbjct: 3 DKDKIAVFIDADN------APAKKID--KVLSELARYGVVNIRKAY------GNWKNANL 48
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAF--EQSEGLEHLVIFSG 121
D L + + ++F G+ D+ L +D ++ ++ + + S
Sbjct: 49 KTWEDVL----HEYAIQPIQQFDLTKGKNAT----DMALVIDVMDVLYTKDVDVICLVSS 100
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
D FT LV K TI+ M F+ L DP ED
Sbjct: 101 DCDFTPLVTRALADGK--TIIGFGERKAPMP---FVNSCSRFLFLDD-------DPSED 147
>gi|212637199|ref|YP_002313724.1| hypothetical protein swp_4494 [Shewanella piezotolerans WP3]
gi|212558683|gb|ACJ31137.1| Conserved hypothetical protein [Shewanella piezotolerans WP3]
Length = 245
Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/181 (19%), Positives = 63/181 (34%), Gaps = 31/181 (17%)
Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+EKIALFID N A+ +D +L +V Y + S +
Sbjct: 5 DKEKIALFIDADNAPAA------KVD--VILSELAKYGVVNIRRAY------GNWKSSNI 50
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSG 121
P D L + + ++F G+ D+ L +DA + ++ ++ + + S
Sbjct: 51 KPWEDVL----HEYAIQPIQQFDLTKGKNAT----DIALVIDAMDILYTKDVDIICLVSS 102
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQ-LRRQADYFMDLAYLKNEIARDPDED 180
D FT LV K ++ + F+ L + + P D
Sbjct: 103 DCDFTPLVTRALADGK------FLIGFGERKAPSAFVNSCSRFLYLDEYEQSVEGLPKFD 156
Query: 181 K 181
K
Sbjct: 157 K 157
>gi|302553970|ref|ZP_07306312.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM
40736]
gi|302471588|gb|EFL34681.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM
40736]
Length = 305
Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/186 (18%), Positives = 64/186 (34%), Gaps = 31/186 (16%)
Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53
A+F+D LYA++ L FD+D L+ A +A ++R Y+Y
Sbjct: 42 AIFVDAGYLYAAAGRLVAGTEDRRAFDLDPEGLIDALIDKARTIFADSRLLRVYWY---D 98
Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
G + + + L K N + +D + D +
Sbjct: 99 GARRRIHTAEQQSIAELP---------DVKVRLGNLNANNQQKGVDSLIRTDLESLARHR 149
Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169
+ + GD + V A Q +V + + ++ L + D +DL +
Sbjct: 150 AISDAALLGGDEDLVSAVEAAQGYGARVHLWGIEAPEGRNQAEPLLWEVDSQRTLDLDFF 209
Query: 170 KNEIAR 175
K ++R
Sbjct: 210 KPYVSR 215
>gi|91786924|ref|YP_547876.1| hypothetical protein Bpro_1025 [Polaromonas sp. JS666]
gi|91696149|gb|ABE42978.1| protein of unknown function DUF88 [Polaromonas sp. JS666]
Length = 260
Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/171 (19%), Positives = 57/171 (33%), Gaps = 29/171 (16%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
D + ++AL ID N + ID +L + Y + S
Sbjct: 2 DHKPRVALLIDADN------SPASKIDL--ILNELSTFGETNIRRAY------GNWKKSE 47
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
L + LH + + ++F + G+ D+ + +DA E ++ + I S
Sbjct: 48 LKGWEEALHEH----AIRPMQQFDYSKGKNAS----DMAMVIDALELLYTDRPDAFGIVS 99
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
D FT LV L+ K V + F+ L L+
Sbjct: 100 SDADFTPLVMHLRAKGAAVYGFGAQKTPEPFV-----NACSKFLFLDKLRP 145
>gi|320008714|gb|ADW03564.1| hypothetical protein Sfla_2131 [Streptomyces flavogriseus ATCC
33331]
Length = 303
Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/185 (17%), Positives = 59/185 (31%), Gaps = 29/185 (15%)
Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
A+F+D +YA++ L FD+D L++AF +A I A
Sbjct: 40 AIFVDAGYVYAAAGLLVTGTEDRRSFDLDAEGLIEAFIDKARTIFA-----------DSR 88
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTE------NCGRKRVKSSMDVELAVDAFEQSEG-- 112
D V + E + N + +D + D +
Sbjct: 89 LLRVYWYDGARRRIHTVEQQSIAELPDVKVRLGNLNANNQQKGVDSLIRTDLESLARHRA 148
Query: 113 LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYLK 170
+ + GD + V A Q +V + + ++ L + D DL + +
Sbjct: 149 ISDAALVGGDEDLVSAVEAAQGYGARVHLWGIEAGEGRNQAEPLLWEVDSQRTFDLDFCR 208
Query: 171 NEIAR 175
+ R
Sbjct: 209 PYVTR 213
>gi|271962863|ref|YP_003337059.1| hypothetical protein Sros_1318 [Streptosporangium roseum DSM 43021]
gi|270506038|gb|ACZ84316.1| hypothetical protein Sros_1318 [Streptosporangium roseum DSM 43021]
Length = 313
Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/187 (14%), Positives = 66/187 (35%), Gaps = 30/187 (16%)
Query: 7 KIALFIDGANLYASSKA--LG------FDIDYRKLLKAFRSR------AIVIRAYYYTTV 52
K A+ +D LYA++ LG + + +L++A + ++R Y+Y
Sbjct: 14 KYAVLVDVGYLYAAAGEVLLGAKERKEYRVSADELIQALQKHAETRIHGELLRIYWYDAA 73
Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG 112
+ L W K N + + +D ++ D +
Sbjct: 74 RDRVPTVDQRVIAQLPW------------VKVRLGNLNARGQQKGVDAQIRSDLEALARH 121
Query: 113 --LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAY 168
+ ++ +GD V A Q ++ + + +++L ++D + +
Sbjct: 122 HAVSDTILLAGDEDMVPAVEAAQAYGVRIHLWGVEPPYGTNQAERLVWESDTVEIISADF 181
Query: 169 LKNEIAR 175
L++ +R
Sbjct: 182 LRSYFSR 188
>gi|86741259|ref|YP_481659.1| hypothetical protein Francci3_2568 [Frankia sp. CcI3]
gi|86568121|gb|ABD11930.1| hypothetical protein Francci3_2568 [Frankia sp. CcI3]
Length = 199
Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/109 (15%), Positives = 30/109 (27%), Gaps = 5/109 (4%)
Query: 40 RAIVIRAYYYTTV---VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKS 96
+ Y PE + W VV + + +
Sbjct: 39 GGELAAVRVYRGRPSPDHQPEAARASDRQADRWTRDPRVVVVRRQLRYPKAWPAEPAQEK 98
Query: 97 SMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS 143
+DV AVD + + V+FS D + ++ V + S
Sbjct: 99 GIDVAFAVDFVRLACEGAYDVGVLFSRDTDLVPALEPVRDLGAHVEVAS 147
>gi|34557802|ref|NP_907617.1| hypothetical protein WS1458 [Wolinella succinogenes DSM 1740]
gi|34483520|emb|CAE10517.1| conserved hypothetical protein [Wolinella succinogenes]
Length = 248
Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/172 (18%), Positives = 57/172 (33%), Gaps = 25/172 (14%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
+++A+ ID N A + LG +LL + Y
Sbjct: 10 KRLAVLIDADN--AQASVLG------ELLAEISKYGTLNIKRAY---------GDWTSSN 52
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
L W + + ++F G+ S++ ++ A+D + LE + S D F
Sbjct: 53 LKSWKEHL-HKYAIAPIQQFNYTSGKNATDSALIID-AMDLLHDAP-LEGFCLVSSDSDF 109
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
T L ++ V + + + D F+ L+ E R P
Sbjct: 110 TRLATRIRESGLVVYGFGEKKTPEAFVA-----ACDKFIYTEILRQEEQRRP 156
>gi|239813864|ref|YP_002942774.1| hypothetical protein Vapar_0855 [Variovorax paradoxus S110]
gi|239800441|gb|ACS17508.1| protein of unknown function DUF88 [Variovorax paradoxus S110]
Length = 272
Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/137 (24%), Positives = 54/137 (39%), Gaps = 26/137 (18%)
Query: 9 ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68
A+FID NL ++ +D+ L + I+ Y G PE L +
Sbjct: 16 AVFIDADNLNDATA-----LDHVLLALRSMADRIL-----YRRAYGRPE----SLKSIHA 61
Query: 69 WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFT 126
L +G + VA + + K++ D L +DA E ++ + I SGD F
Sbjct: 62 VLWRHGVRPVANLIVD----------KTTTDSALVIDAVEAVCTNDIDIVAICSGDADFV 111
Query: 127 TLVAALQRKVKKVTIVS 143
L L+ K +V S
Sbjct: 112 PLAIWLREKGCRVLCYS 128
>gi|146300165|ref|YP_001194756.1| hypothetical protein Fjoh_2410 [Flavobacterium johnsoniae UW101]
gi|146154583|gb|ABQ05437.1| hypothetical protein Fjoh_2410 [Flavobacterium johnsoniae UW101]
Length = 259
Score = 49.0 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 35/175 (20%), Positives = 57/175 (32%), Gaps = 37/175 (21%)
Query: 7 KIALFIDGANL-YASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
K+A+ ID N+ Y++ K + ++ Y
Sbjct: 10 KLAVLIDADNVPYSNVKGM---------MEEIAKFGTPTTKRIYA--------------- 45
Query: 66 LLDWLHYN--GFQ-VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
DW N G++ V+ + A + K+S D L +DA + S L+ I S
Sbjct: 46 --DWTKPNANGWKAVLLEHAITPIQQYSYTVGKNSSDSALIIDAMDLLYSGKLDGFCIVS 103
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
D FT L L+ KV + D F+ + L I +
Sbjct: 104 SDSDFTRLAVRLRESGMKVIGIGEKK-----TPSSFIVACDRFIYIEVLDGAIQK 153
>gi|170093988|ref|XP_001878215.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646669|gb|EDR10914.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 565
Score = 49.0 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Query: 99 DVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASD 154
D + VD + +V+ SGD F ++ L+ + V +++ + S+ S
Sbjct: 91 DKMMLVDMLSHAIDNPAPTTIVLISGDRDFAYAISVLRLRRYHVVLITLANAHLSLTSQ 149
>gi|254524406|ref|ZP_05136461.1| protein containing DUF88 [Stenotrophomonas sp. SKA14]
gi|219721997|gb|EED40522.1| protein containing DUF88 [Stenotrophomonas sp. SKA14]
Length = 259
Score = 49.0 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/173 (19%), Positives = 54/173 (31%), Gaps = 29/173 (16%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
M +P ++IAL ID N A ID ++L + Y
Sbjct: 1 MSEPEKRIALLIDADN------APASKID--EVLAEVARYGVANVRRAY----------G 42
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118
+ P L + + ++F + G+ D+ + +DA + + L+ I
Sbjct: 43 NWKSPRLKGWEAVLHEYAIRPIQQFAYSKGKNAS----DMAMVIDAMDLLYARNLDGFAI 98
Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
S D FT +V L KV + F L L
Sbjct: 99 VSSDADFTPMVMRLLTDGVKVYGFGEKKTPEPFV-----NACSKFTYLEALGQ 146
>gi|25029366|ref|NP_739420.1| hypothetical protein CE2810 [Corynebacterium efficiens YS-314]
gi|259508454|ref|ZP_05751354.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
gi|23494654|dbj|BAC19620.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
gi|259164008|gb|EEW48562.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
Length = 422
Score = 49.0 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/172 (19%), Positives = 58/172 (33%), Gaps = 29/172 (16%)
Query: 6 EKIALFIDGANL---YA----SSKALGFDIDYRKLLKAFRS------RAIVIRAYYYTTV 52
E+ +F+D + L + + +ID +++ + V R +Y +
Sbjct: 3 ERTQVFVDTSYLLASFYNSWETGARAQLEIDLPEVVGVLGRMIEQQLKQPVQRQMWYDGI 62
Query: 53 VGDPEQQFSPLHPLLDWLHY-NGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS- 110
S H L +G Q+ A E+ G +R + ++D L D
Sbjct: 63 PD------SGPHRYQRALRTCDGVQLRAGQLIEW----GERRTQKAVDTRLVADLVLAGV 112
Query: 111 -EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
+V+ SGD V +V + SM+S LR D
Sbjct: 113 RGQCSDIVLVSGDADMIPGVQEATNAGVRVHLYGF--GWDSMSSQ-LRHCCD 161
>gi|194367375|ref|YP_002029985.1| hypothetical protein Smal_3603 [Stenotrophomonas maltophilia
R551-3]
gi|194350179|gb|ACF53302.1| protein of unknown function DUF88 [Stenotrophomonas maltophilia
R551-3]
Length = 259
Score = 49.0 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/173 (19%), Positives = 54/173 (31%), Gaps = 29/173 (16%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
M +P ++IAL ID N A ID ++L + Y
Sbjct: 1 MSEPEKRIALLIDADN------APASKID--EVLAEVARYGVANVRRAY----------G 42
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118
+ P L + + ++F + G+ D+ + +DA + + L+ I
Sbjct: 43 NWKSPRLKGWEAVLHEYAIRPIQQFAYSKGKNAS----DMAMVIDAMDLLYARNLDGFAI 98
Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
S D FT +V L KV + F L L
Sbjct: 99 VSSDADFTPMVMRLLTDGVKVYGFGEKKTPEPFV-----NACSKFTYLEALGQ 146
>gi|221369511|ref|YP_002520607.1| hypothetical protein RSKD131_3674 [Rhodobacter sphaeroides KD131]
gi|221162563|gb|ACM03534.1| Hypothetical Protein RSKD131_3674 [Rhodobacter sphaeroides KD131]
Length = 223
Score = 49.0 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 35/162 (21%), Positives = 58/162 (35%), Gaps = 37/162 (22%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
+ A+ +DG N+ A+ G I L+ R Y P
Sbjct: 4 RPAVLVDGDNISAA---HGRQI-----LEIARGHGTPGVVRVY-------GNAQCPK--- 45
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124
DW G++++ K++ D+ LA+DA E + G+E V+ + DG
Sbjct: 46 -DWHEAWGYRMI-----------HAGSGKNASDLLLAIDAMELALARGVEAFVVATSDGD 93
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
F+ L L+ V V + S R F++L
Sbjct: 94 FSHLAHRLRELGTAVIGVGEAKAPASF-----RGACSRFVEL 130
>gi|237799136|ref|ZP_04587597.1| hypothetical protein POR16_09916 [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331021991|gb|EGI02048.1| hypothetical protein POR16_09916 [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 264
Score = 49.0 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/99 (17%), Positives = 38/99 (38%), Gaps = 7/99 (7%)
Query: 76 QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQ 133
+V+ + + + + K++ D L +DA + + + + S D FT L + L+
Sbjct: 59 KVLLDYSIQPIQQFAYTKGKNATDSSLIIDAMDLLYTRRFDGFCLVSSDSDFTRLASRLR 118
Query: 134 RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
+ V + + D F+ + L+ E
Sbjct: 119 EEGLTVYGFGEEKTPRPFVA-----ACDKFIYIELLREE 152
>gi|262204298|ref|YP_003275506.1| hypothetical protein Gbro_4480 [Gordonia bronchialis DSM 43247]
gi|262087645|gb|ACY23613.1| hypothetical protein Gbro_4480 [Gordonia bronchialis DSM 43247]
Length = 230
Score = 49.0 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/119 (20%), Positives = 48/119 (40%), Gaps = 21/119 (17%)
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG---LEHLVIFS 120
P +D L G+ V AK + ++ +D ++ +D + L +V+ S
Sbjct: 101 RPWVDALRNVGYAVFAKP--KLADDS-------DVDADM-LDHIQLRRQTVGLAGVVVAS 150
Query: 121 GDGC-FTTLVAALQRKVKKVTIVSTVLSDP-SMASDQLRRQADYFMDLAYLKNEIARDP 177
DG F ++ + + VT++ ++ +D L F+DL + R+P
Sbjct: 151 ADGQAFREPLSQVAAEGVGVTVIGFREHASWALTADDL-----EFIDLEDIPGVF-REP 203
>gi|254388917|ref|ZP_05004148.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
27064]
gi|197702635|gb|EDY48447.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
27064]
Length = 334
Score = 49.0 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 38/189 (20%), Positives = 66/189 (34%), Gaps = 37/189 (19%)
Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53
A+F+D +YA++ L FD+D +++AF +A ++R Y+Y
Sbjct: 70 AIFVDAGYVYAAAGLLVAGTEDRRAFDLDAEGMIEAFIDKARTIFADSRLLRVYWYDGAR 129
Query: 54 GD---PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110
PEQQ P K N + +D + D +
Sbjct: 130 RRIHTPEQQSIAELP---------------DVKVRLGNLNANNQQKGVDSLIRSDLESLA 174
Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDL 166
+ + GD + V A Q +V + +D S ++ L + D DL
Sbjct: 175 RHRAISDAALVGGDEDLVSAVEAAQGYGARVHLWGIEAADGSNQAEPLLWEVDSQRTFDL 234
Query: 167 AYLKNEIAR 175
+ + I R
Sbjct: 235 DFCRPYITR 243
>gi|284161858|ref|YP_003400481.1| hypothetical protein Arcpr_0744 [Archaeoglobus profundus DSM 5631]
gi|284011855|gb|ADB57808.1| protein of unknown function DUF88 [Archaeoglobus profundus DSM
5631]
Length = 171
Score = 49.0 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/161 (16%), Positives = 58/161 (36%), Gaps = 32/161 (19%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
+ R++IA+ +DG N+ F+++ ++ + + A +
Sbjct: 25 ESRKRIAVLVDGPNM----LRKEFNLNLSEIRDILKEYGDIKVAKVFL--------NQYA 72
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFS 120
L++ + GF+ V +DV +AV+A + + ++ L + +
Sbjct: 73 TDKLVEAVENQGFEPVI--------------TSGDVDVRMAVEAMDLIYNDLIDVLALVT 118
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
D F ++ K+ I+ S L+ AD
Sbjct: 119 RDADFKAVLKKAMEMGKETIIIGAEPGF----STALKNSAD 155
>gi|294814854|ref|ZP_06773497.1| DUF88 domain-containing protein [Streptomyces clavuligerus ATCC
27064]
gi|294327453|gb|EFG09096.1| DUF88 domain-containing protein [Streptomyces clavuligerus ATCC
27064]
Length = 322
Score = 49.0 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 38/189 (20%), Positives = 66/189 (34%), Gaps = 37/189 (19%)
Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53
A+F+D +YA++ L FD+D +++AF +A ++R Y+Y
Sbjct: 58 AIFVDAGYVYAAAGLLVAGTEDRRAFDLDAEGMIEAFIDKARTIFADSRLLRVYWYDGAR 117
Query: 54 GD---PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110
PEQQ P K N + +D + D +
Sbjct: 118 RRIHTPEQQSIAELP---------------DVKVRLGNLNANNQQKGVDSLIRSDLESLA 162
Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDL 166
+ + GD + V A Q +V + +D S ++ L + D DL
Sbjct: 163 RHRAISDAALVGGDEDLVSAVEAAQGYGARVHLWGIEAADGSNQAEPLLWEVDSQRTFDL 222
Query: 167 AYLKNEIAR 175
+ + I R
Sbjct: 223 DFCRPYITR 231
>gi|317131070|ref|YP_004090384.1| protein of unknown function DUF88 [Ethanoligenens harbinense
YUAN-3]
gi|315469049|gb|ADU25653.1| protein of unknown function DUF88 [Ethanoligenens harbinense
YUAN-3]
Length = 255
Score = 49.0 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 35/170 (20%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
++A+ ID N+ S + +L+ Y
Sbjct: 8 RLAVLIDAENVPYS--------NVTGMLEEITRYGTPTVKRIYG---------------- 43
Query: 67 LDWLHYN--GFQ-VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSG 121
DW N G++ V+ A + K+S D + +DA + + ++ + S
Sbjct: 44 -DWTTQNMSGWKNVLVPNAIVPVQQYCYTSGKNSSDSAMIIDAMDILYAGKIDGFCLVSS 102
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
D FT L L+ KKV D D F+ L + +
Sbjct: 103 DSDFTRLATRLRESGKKVYGFGEKK-----TPDAFIAACDKFIYLEIIAS 147
>gi|78357527|ref|YP_388976.1| hypothetical protein Dde_2484 [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78219932|gb|ABB39281.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 439
Score = 49.0 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 62/167 (37%), Gaps = 39/167 (23%)
Query: 9 ALFIDGANLYASSK------ALGFDI--DYRKLLKAFRS-----------RAIVIRAYYY 49
ALF+D N+Y ++ G+ D ++ ++ R +++ Y
Sbjct: 13 ALFVDFDNIY--TRLAEQDPQYGYLFATDPQRWMRWLEHHALRMLHGDGVRRRILKRCCY 70
Query: 50 TTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ 109
Q F P N F V K+ K+S D+ L +DA +
Sbjct: 71 L-----NPQIFQDFRPHF---VRNAFSVTDCP-------PLTKQGKTSADIHLVIDALDA 115
Query: 110 SEG---LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMAS 153
+ +I SGD FT L+ L+ +K ++S + P+ A+
Sbjct: 116 LSHPTYFDEFIILSGDADFTPLLIRLREHARKTLVLSVGFTSPAYAA 162
>gi|227505745|ref|ZP_03935794.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940]
gi|227197713|gb|EEI77761.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940]
Length = 198
Score = 49.0 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 46/116 (39%), Gaps = 15/116 (12%)
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
+ P ++ + GF V AK + +D ++ E + L+ +++ S D
Sbjct: 68 IRPWVEAIRNVGFAVFAKPKLHEDD---------DVDPDMIAYIQENRDNLDSVIVASAD 118
Query: 123 G-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
G F +L+ L + K V ++ + + F+DL ++ R+P
Sbjct: 119 GQNFQSLLEELAAEGKPVCVLGFHEHASWAVTHEDI----EFVDLEDIEGVF-REP 169
>gi|329118512|ref|ZP_08247216.1| hypothetical protein HMPREF9123_0644 [Neisseria bacilliformis ATCC
BAA-1200]
gi|327465247|gb|EGF11528.1| hypothetical protein HMPREF9123_0644 [Neisseria bacilliformis ATCC
BAA-1200]
Length = 264
Score = 49.0 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/171 (19%), Positives = 54/171 (31%), Gaps = 27/171 (15%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
++A+ ID N AS++ D +L Y VGD Q ++
Sbjct: 17 RLAVLIDADN--ASAR------DIAAILDEVTKFGDATVKRTYGNFVGDNGQWKQVINDY 68
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126
K ++F G+ M ++ A+D S+ L+ I S D FT
Sbjct: 69 -----------AIKPMQQFAFTTGKNATDGFMIID-AMDLL-YSDRLDGFCIVSSDSDFT 115
Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL-KNEIARD 176
L L+ + + F+ + L EI D
Sbjct: 116 ALAIRLKEQGM--PVYGFGRKQ---TPKAFINACTQFIYVENLISEEIKND 161
>gi|320103348|ref|YP_004178939.1| hypothetical protein Isop_1808 [Isosphaera pallida ATCC 43644]
gi|319750630|gb|ADV62390.1| protein of unknown function DUF88 [Isosphaera pallida ATCC 43644]
Length = 276
Score = 48.6 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 15/119 (12%), Positives = 39/119 (32%), Gaps = 8/119 (6%)
Query: 48 YYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAF 107
+Y +++ + + + + + + + +D +AVD
Sbjct: 130 WYEGKKRALDRKKRFYYGVQAATDFVEIR---QEGHWKIDLLHHTINEKGLDTSMAVDMI 186
Query: 108 EQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDP-----SMASDQLRRQAD 161
+ + ++ +GD V ++ K V ++ AS +L+ AD
Sbjct: 187 ALRDTYDVALLITGDTDGIPGVHYVKNHAKHVGVIEFRRGSRDDFGGKTASSRLKIAAD 245
>gi|254173531|ref|ZP_04880203.1| conserved hypothetical protein TIGR00288 [Thermococcus sp. AM4]
gi|214032223|gb|EEB73053.1| conserved hypothetical protein TIGR00288 [Thermococcus sp. AM4]
Length = 165
Score = 48.6 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 62/164 (37%), Gaps = 32/164 (19%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
P+++I L IDG N+ F I +++A V A Q++P
Sbjct: 18 QPKKRIGLIIDGPNI----LRKEFGIKLEDIIEALNRIGSVRIAKVIL-------NQYAP 66
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
L++ + G + V V DV +A++ E + ++ + + S
Sbjct: 67 -QGLVEAIVNQGLEPVI--------------VAGDTDVRVAIETMEMIYTADVDVIALAS 111
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
D F L+ +R+ K+ ++ S L+ ADY +
Sbjct: 112 RDADFLPLIIEAKRRGKETVVIGVEPGF----SVALQNAADYVI 151
>gi|330943352|gb|EGH45725.1| hypothetical protein PSYPI_26829 [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 264
Score = 48.6 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 56/164 (34%), Gaps = 29/164 (17%)
Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
+A+FID N A SK LG +L S V Y
Sbjct: 10 VAMFIDADN--APSKKLG------SVLAELASYGAVSIRRAYGNWKSPS----------- 50
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCF 125
L G +V+ + A + + + K++ D+ +AVDA + ++ + S D F
Sbjct: 51 --LDPWG-KVLHEHAIQPVQQFDLVKGKNATDMAMAVDAMDVLFNKPVDVFCLVSSDCDF 107
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
T LV L+ + K+V + F+
Sbjct: 108 TPLVMRLRAEGKQVVGFGERKAPEPFV-----NACSRFLYFDQY 146
>gi|299753919|ref|XP_002911926.1| hypothetical protein CC1G_13966 [Coprinopsis cinerea okayama7#130]
gi|298410524|gb|EFI28432.1| hypothetical protein CC1G_13966 [Coprinopsis cinerea okayama7#130]
Length = 938
Score = 48.6 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 39/93 (41%), Gaps = 19/93 (20%)
Query: 99 DVELAVDAFEQSEGLEH-----LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMAS 153
D + VD + ++H ++ SGD F ++ L+ + KV +V+ A
Sbjct: 538 DKMMLVDML--AHAIDHPAPRTFILISGDRDFAYALSTLRLRRYKVVLVTL-----PNAH 590
Query: 154 DQLRRQA----DYFMDLAYLKNEIARDPDEDKK 182
L+ QA D+F D+ + I P KK
Sbjct: 591 ASLKAQATTCLDWFTDVVDI---ITPPPSSPKK 620
Score = 37.4 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 40/110 (36%), Gaps = 13/110 (11%)
Query: 48 YYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTE-NCGRKRVKSSMDVELAVDA 106
Y + + +P + L L +G T+ + + + ++V LA D
Sbjct: 53 YLSISLHEPSSKRDRASALRSELQVSGVS--------LTDVDTSTPSLNAGLNVMLAADM 104
Query: 107 FEQS----EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMA 152
+ + +V+ + V+ L+ + +V +V++ L +
Sbjct: 105 YAYALDKTPLTATIVLVTNAPALAYAVSLLRLRNYRVVVVTSSLGGQDTS 154
>gi|315498578|ref|YP_004087382.1| hypothetical protein Astex_1565 [Asticcacaulis excentricus CB 48]
gi|315416590|gb|ADU13231.1| hypothetical protein Astex_1565 [Asticcacaulis excentricus CB 48]
Length = 254
Score = 48.6 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/183 (17%), Positives = 63/183 (34%), Gaps = 16/183 (8%)
Query: 5 REKIALFIDGANLYASSKALGFD----IDYRKLLKAFR-SRAIVIRAYYYTTVVGDPEQQ 59
R++ A++ DG NLY + A +D + L +A S +V R + + + +
Sbjct: 30 RKRAAVYYDGFNLYHAVDAYKRPYLKWLDLKALAQAISPSDEVVKRVVWCSAFRPQNKSK 89
Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCG------RKRVKSSMDVELAVDAFEQSEG- 112
+ L G + C ++ DV LA+ +E
Sbjct: 90 MKRHEDYMRALQARGVLCRLGHFVSAIDGCNACGHQWHLAIEKQGDVNLALSIASDAEDN 149
Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
+ + S DG L+ + K +V V + + R AD +++ +
Sbjct: 150 LFDVCYLVSADGDHAATARYLKERFPKKELV-LVCPPGRYPNKHILRFADRVVEIE--RE 206
Query: 172 EIA 174
+
Sbjct: 207 HLE 209
>gi|291453992|ref|ZP_06593382.1| conserved hypothetical protein [Streptomyces albus J1074]
gi|291356941|gb|EFE83843.1| conserved hypothetical protein [Streptomyces albus J1074]
Length = 317
Score = 48.6 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 34/191 (17%), Positives = 62/191 (32%), Gaps = 31/191 (16%)
Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53
A+F+D LYA++ L FD+D L+ A RA ++R Y+Y
Sbjct: 52 AVFVDAGYLYAAAGRLVTGTEERGAFDLDAEGLIDALIDRARQIFADSRLLRVYWY---- 107
Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
+ + K N + +D + D +
Sbjct: 108 --DGARRRIHTAEQLAIAALP------DVKVRLGNLNANNQQKGVDSLIRGDLESLARHR 159
Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169
+ V+ GD + V + Q +V + + +D L + D +DLA+
Sbjct: 160 AISDAVLIGGDEDLVSAVESAQGHGARVHLWGIEAPEGRNQADPLLWEVDTQRTLDLAFF 219
Query: 170 KNEIARDPDED 180
+ + R
Sbjct: 220 QPYLTRRATTP 230
>gi|257454371|ref|ZP_05619634.1| conserved hypothetical protein [Enhydrobacter aerosaccus SK60]
gi|257448274|gb|EEV23254.1| conserved hypothetical protein [Enhydrobacter aerosaccus SK60]
Length = 361
Score = 48.6 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 35/162 (21%), Positives = 59/162 (36%), Gaps = 28/162 (17%)
Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
IA+ IDG N+ ++K + +L + + Y GD +Q L
Sbjct: 11 IAVLIDGDNI--NAK------NIESILAKVSTLGTIACKRIY----GDFKQG-----KLT 53
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE-GLEHLVIFSGDGCFT 126
W + K+ E + K++ D+ LA+DA + S + I S D F+
Sbjct: 54 TWDD-----ISLKLLLEQVHIPAYVKGKNATDIALAIDAVDLSYLDYDCFCIISSDSDFS 108
Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
L L+ K KKV S + + D + +
Sbjct: 109 ILAKNLRTKGKKV-----FGFGKSTTVESFKVACDDYFVMDD 145
>gi|117922000|ref|YP_871192.1| hypothetical protein Shewana3_3564 [Shewanella sp. ANA-3]
gi|117614332|gb|ABK49786.1| protein of unknown function DUF88 [Shewanella sp. ANA-3]
Length = 268
Score = 48.6 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/167 (17%), Positives = 52/167 (31%), Gaps = 29/167 (17%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
+EKIA+FID N A D +L ++ Y P
Sbjct: 2 QNKEKIAVFIDADN------APARKFD--VVLAELAKHGLISIRKAY---GNWKSPNLKP 50
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
+L + + ++F G+ D+ L +D + ++ ++ + + S
Sbjct: 51 WEEIL-------HEYAIQPIQQFDLTKGKNAS----DIALVIDVMDILYTKDIDIICLIS 99
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
D FT LV K V + + F+ L
Sbjct: 100 SDCDFTPLVTRALADGKTV----FGFGERKAPA-AFVNSCSRFLYLD 141
>gi|238023177|ref|ZP_04603603.1| hypothetical protein GCWU000324_03103 [Kingella oralis ATCC 51147]
gi|237865560|gb|EEP66700.1| hypothetical protein GCWU000324_03103 [Kingella oralis ATCC 51147]
Length = 258
Score = 48.2 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/163 (19%), Positives = 59/163 (36%), Gaps = 29/163 (17%)
Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
+A+FID N+ A ID+ ++ + V+ Y + + + + LL
Sbjct: 10 VAVFIDADNVPA------KKIDF--IISELANYGAVMVRKIYGNWKSERLKGWEEV--LL 59
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCF 125
D+ ++F G+ D+ L +D + S ++ I S D F
Sbjct: 60 DY--------ALAPVQQFDYAKGKNAT----DMALTIDVMDMLYSGKIDVFCIVSSDSDF 107
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
T L ++ + K+V + S L + F+ L
Sbjct: 108 TPLAMRVKTEGKQV-----IGFGRHSTSKALVAACNKFLFLDD 145
>gi|121999162|ref|YP_001003949.1| hypothetical protein Hhal_2384 [Halorhodospira halophila SL1]
gi|121590567|gb|ABM63147.1| conserved hypothetical protein [Halorhodospira halophila SL1]
Length = 218
Score = 48.2 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 30/158 (18%), Positives = 52/158 (32%), Gaps = 31/158 (19%)
Query: 7 KIALFIDGANLYASSK---ALGFDIDYRKLLK--AFRSRAIVIRAYYYTT----VVGDPE 57
+ +++DG NLY A + +D L + A + ++ YYT + D
Sbjct: 2 RTVVYVDGYNLYYGLLRKTAFKW-LDLVVLFRDHALDPQVDLVEVRYYTAPVLGRMCDDP 60
Query: 58 QQFSPLHPLLDWLHYN----------------GFQVVAKVAKEFTENCGRK---RVKSSM 98
+ L L F+ +A+ E + + +
Sbjct: 61 KSPQRQRRYLQALRTMHPERLSIIEGKIIATTPFKRLAQPIPERPDLERVQVLDFHEKKT 120
Query: 99 DVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQR 134
DV LA D S E V+ S D +A ++R
Sbjct: 121 DVNLAADLIAGSWVGSYEQAVVCSNDTDLDAALATVRR 158
>gi|257455528|ref|ZP_05620760.1| conserved hypothetical protein [Enhydrobacter aerosaccus SK60]
gi|257447097|gb|EEV22108.1| conserved hypothetical protein [Enhydrobacter aerosaccus SK60]
Length = 350
Score = 48.2 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 30/167 (17%), Positives = 59/167 (35%), Gaps = 28/167 (16%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
K+A+ ID N +S+K + +L+ + Y + L
Sbjct: 12 KLAVLIDADN--SSAKKI------PLILQEVAKYGVASVKRVY------GDWSSENLKNW 57
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124
D L + ++F G+ D+ L ++A + S+ L+ I S D
Sbjct: 58 RDVLLPHAIT----PVQQFAYTSGKDAT----DMMLIINAMDLLYSKALDGFCIVSSDSD 109
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
FT L + ++ +V + S + D F+ + L++
Sbjct: 110 FTPLASRIRESG----LVVYGFGEKSKTPEAFINACDKFIYIENLED 152
>gi|294670344|ref|ZP_06735227.1| hypothetical protein NEIELOOT_02063 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307948|gb|EFE49191.1| hypothetical protein NEIELOOT_02063 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 399
Score = 48.2 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 37/177 (20%), Positives = 60/177 (33%), Gaps = 30/177 (16%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
+K+A+ ID N + A DI +LL+ I Y GD S
Sbjct: 6 NKKLAVLIDADN----APA---DI-IDRLLEEIAKYGIASVKRIY----GDWSHGLSKWK 53
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122
L ++ ++F G+ D+ L +DA + S + I S D
Sbjct: 54 AAL-----LPHAII--PVQQFAYTKGKNAT----DMALVIDAMDLLYSGNFDGFCIVSSD 102
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
FT L + L+ +T+ + R+ D F+ + E R E
Sbjct: 103 SDFTRLASRLRESG--LTVYGFGEKK---TPEAFRKACDKFVYTEIFRPEKQRQEKE 154
>gi|114570762|ref|YP_757442.1| hypothetical protein Mmar10_2212 [Maricaulis maris MCS10]
gi|114341224|gb|ABI66504.1| conserved hypothetical protein [Maricaulis maris MCS10]
Length = 201
Score = 48.2 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 33/186 (17%), Positives = 66/186 (35%), Gaps = 34/186 (18%)
Query: 7 KIALFIDGANLYASSKALG--FDIDYRKLLKA--FRSRAIVIRAYYY---------TTVV 53
K+A+ IDG ++ G ++ D+ + L R ++RA YY V
Sbjct: 2 KVAVLIDGGFTRVLARKDGHSYNPDFIENLAHCVVSDRETLLRALYYDCEPFTGTVQLPV 61
Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEF----------------TENCGRKRVKSS 97
+++FS LD L F V K +F ++ +
Sbjct: 62 SGEDKEFSKSGKWLDDLARKDFFAVRKGVLKFRGFKPRKIPVSGRALSDQDFAPDFEQKG 121
Query: 98 MDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQ 155
+D+ + +D S +E +V+ S D + ++ ++ + P + +
Sbjct: 122 VDMRIGLDMATLSNGPKVERIVLISNDTDCVPAMKHARKAGVQLVLGVPPNQSP---AHE 178
Query: 156 LRRQAD 161
L +D
Sbjct: 179 LAMHSD 184
>gi|89896708|ref|YP_520195.1| hypothetical protein DSY3962 [Desulfitobacterium hafniense Y51]
gi|89336156|dbj|BAE85751.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 274
Score = 48.2 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/146 (15%), Positives = 53/146 (36%), Gaps = 13/146 (8%)
Query: 11 FIDGANLYASSKALGFDIDYRKLLKAFR---SRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
FID N++ G+++ L+++ + + + + Y D E+ +
Sbjct: 6 FIDYENIWTGLFEQGYELTPEILMESIQLYAKQNDYVLSAIYLYANFDREEFWRAQTSFE 65
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA----FEQSEGLEHLVIFSGDG 123
V + +++ DVEL ++A ++ + + +GDG
Sbjct: 66 K------IHVYTRHVYGKNNFASTGLRRNAADVELILEAQEILLTRTATFDVFFLLTGDG 119
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDP 149
F L+ ++ K V ++ S
Sbjct: 120 DFLPLLRKVRAWGKDVKVIGVKGSMH 145
>gi|94496412|ref|ZP_01302989.1| hypothetical protein SKA58_09476 [Sphingomonas sp. SKA58]
gi|94424158|gb|EAT09182.1| hypothetical protein SKA58_09476 [Sphingomonas sp. SKA58]
Length = 257
Score = 48.2 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 16/75 (21%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 99 DVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
D+++ +DA + S ++ + S D FT LV +++ + + ++ +
Sbjct: 80 DMKMTIDAMDLLASGRVDGFGLMSSDSDFTPLVTRIRQDG--IPVYGFGNAN---TPEGF 134
Query: 157 RRQADYFMDLAYLKN 171
RR F+D+A L+
Sbjct: 135 RRACTRFIDVAALEP 149
>gi|72163404|ref|YP_291061.1| hypothetical protein Tfu_3005 [Thermobifida fusca YX]
gi|71917136|gb|AAZ57038.1| hypothetical protein Tfu_3005 [Thermobifida fusca YX]
Length = 516
Score = 48.2 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 30/190 (15%), Positives = 63/190 (33%), Gaps = 37/190 (19%)
Query: 5 REKIALFIDGANL-------YASSK---ALGFDIDYRKLLKAF------RSRAIVIRAYY 48
++ ALF+D L ++ ++ + DY L++ R+ +R Y+
Sbjct: 1 MDRCALFVDAGYLLAEGAMAVHGTRDRDSVSW--DYAALVQLLNEVARDRTGLPPLRCYW 58
Query: 49 YTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE 108
Y V Q + + + + + E K D
Sbjct: 59 YEAVTDSRRSQEQEGIAEIPGVKFR--AARIRPGRR--EGVENYVQK---------DLIP 105
Query: 109 QSEG---LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165
+ + V+ GD ++A Q +VT+V + S LR + D ++
Sbjct: 106 LARNRAICD-AVLVCGDEDMAPVIAEAQEYGVRVTVVHISIEGNWTVSRALRHECDDLIE 164
Query: 166 L--AYLKNEI 173
+ +L+ +
Sbjct: 165 IGAGHLRPHV 174
>gi|212705003|ref|ZP_03313131.1| hypothetical protein DESPIG_03071 [Desulfovibrio piger ATCC 29098]
gi|212671555|gb|EEB32038.1| hypothetical protein DESPIG_03071 [Desulfovibrio piger ATCC 29098]
Length = 229
Score = 48.2 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 35/166 (21%), Positives = 58/166 (34%), Gaps = 37/166 (22%)
Query: 9 ALFIDGANLYA--------SSKALGFDIDYR----------KLLKAFRSRAIVIRAYYYT 50
AL++D N+Y +++A G YR ++L R +++ Y
Sbjct: 13 ALYVDFDNIYTRFLEADPEAARAFGMA-PYRWVRWIENHALRILYGDGVRRRILKRMCYL 71
Query: 51 TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAF--- 107
+ FQVV R K+S D+ L +D
Sbjct: 72 --------NPQRYQEFRYHFIRSAFQVVDCP-------PLTTRGKTSTDIHLVMDCMDDL 116
Query: 108 EQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMAS 153
+ +I SGD FT L+ LQ ++ I+S S P+ +
Sbjct: 117 SHPTHFDEFIILSGDADFTPLLIRLQEHARRTLILSVGYSSPAYTA 162
>gi|255931419|ref|XP_002557266.1| Pc12g03870 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211581885|emb|CAP80014.1| Pc12g03870 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 259
Score = 48.2 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 38/107 (35%), Gaps = 7/107 (6%)
Query: 77 VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQR 134
V+ + + + + K++ D + VDA + S + + S D FT L ++
Sbjct: 56 VLLRNSIQPIQQFAYTHGKNATDSAMIVDAMDLLHSGNFDGFCLVSSDSDFTRLATRIRE 115
Query: 135 KVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
KV + + D F+ LK P+ ++
Sbjct: 116 SGLKVYGFGERKTPKPFVA-----ACDEFIYTEDLKYLPEFAPNSNE 157
>gi|188583320|ref|YP_001926765.1| hypothetical protein Mpop_4114 [Methylobacterium populi BJ001]
gi|179346818|gb|ACB82230.1| hypothetical protein Mpop_4114 [Methylobacterium populi BJ001]
Length = 246
Score = 48.2 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 53/135 (39%), Gaps = 14/135 (10%)
Query: 4 PREKIALFIDGANLYASSKALGFDI----DYRKLLKAFRSR--AIVIRAYYYTTVVGDPE 57
R + AL+IDG NLY S LG ++ KL ++ SR ++R + T
Sbjct: 10 SRIRAALYIDGFNLYHSVNDLGEPFLKWCNFWKLGESIISRQSEELVRVVFCTAYYPGDH 69
Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFT---ENCGRKRVKSS---MDVELAVDAFEQS- 110
+ L+ L G + V +CG K + D+ LA+ ++ +
Sbjct: 70 SKKIRHERLVRALKLVGVETVLGHFSHEDAKCRDCGSTWQKPTEKATDINLALSVYDDAV 129
Query: 111 -EGLEHLVIFSGDGC 124
+ ++ + + D
Sbjct: 130 QDVMDTAYLLTADTD 144
>gi|222479667|ref|YP_002565904.1| protein of unknown function DUF88 [Halorubrum lacusprofundi ATCC
49239]
gi|222452569|gb|ACM56834.1| protein of unknown function DUF88 [Halorubrum lacusprofundi ATCC
49239]
Length = 164
Score = 48.2 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 35/166 (21%), Positives = 56/166 (33%), Gaps = 31/166 (18%)
Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
+ALF+DG N+ FD+D + A + ++ Y L+
Sbjct: 13 VALFVDGPNV----LREEFDVDLDDVRIAAEAEGQLVTTRLYL--------DEHATPGLI 60
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCF 125
GF+VV +DV+LAVDA + + L I S D F
Sbjct: 61 QAAEARGFEVVV--------------TSGDVDVKLAVDAARFAAEGRMSTLAIASRDTDF 106
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
+V + ++ SD LR + + L +N
Sbjct: 107 KPVVEIANSYGIRTLAIAPGEFGR---SDALRNATNDSVTLDGDRN 149
>gi|254776999|ref|ZP_05218515.1| hypothetical protein MaviaA2_20351 [Mycobacterium avium subsp.
avium ATCC 25291]
Length = 296
Score = 48.2 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 43/189 (22%), Positives = 69/189 (36%), Gaps = 23/189 (12%)
Query: 7 KIALFIDGANLYASSK-----ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
++A+++D N+ S F D K L+ F R + +A + D F
Sbjct: 12 RVAVYLDFDNIVISRYDQIHGRNSFQRDKAKGLEQFTER--LEQATVDVGAILDFASSFG 69
Query: 62 PL---HPLLDWLHYN--GFQ--VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---E 111
L DW G++ +VA+ K+ D+ LAVDA E
Sbjct: 70 TLVLTRAYADWSAEINAGYRGQLVARAVDLVQLFPAAAYGKNGADIRLAVDAVEDMFRLP 129
Query: 112 GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
L H+VI +GD + L +R + V + + +S L D F+ L
Sbjct: 130 DLTHVVIVAGDSDYIPLAQRCKRLGRYVVGIGVAGA----SSRALAAACDEFVIYDALPG 185
Query: 172 E--IARDPD 178
+ R P
Sbjct: 186 VTALDRTPA 194
>gi|239982145|ref|ZP_04704669.1| hypothetical protein SalbJ_22130 [Streptomyces albus J1074]
Length = 302
Score = 48.2 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 34/191 (17%), Positives = 62/191 (32%), Gaps = 31/191 (16%)
Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53
A+F+D LYA++ L FD+D L+ A RA ++R Y+Y
Sbjct: 37 AVFVDAGYLYAAAGRLVTGTEERGAFDLDAEGLIDALIDRARQIFADSRLLRVYWY---- 92
Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
+ + K N + +D + D +
Sbjct: 93 --DGARRRIHTAEQLAIAALP------DVKVRLGNLNANNQQKGVDSLIRGDLESLARHR 144
Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169
+ V+ GD + V + Q +V + + +D L + D +DLA+
Sbjct: 145 AISDAVLIGGDEDLVSAVESAQGHGARVHLWGIEAPEGRNQADPLLWEVDTQRTLDLAFF 204
Query: 170 KNEIARDPDED 180
+ + R
Sbjct: 205 QPYLTRRATTP 215
>gi|296272728|ref|YP_003655359.1| hypothetical protein Arnit_1193 [Arcobacter nitrofigilis DSM 7299]
gi|296096902|gb|ADG92852.1| protein of unknown function DUF88 [Arcobacter nitrofigilis DSM
7299]
Length = 236
Score = 48.2 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 37/180 (20%), Positives = 62/180 (34%), Gaps = 26/180 (14%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
+K+A+ ID N AS +LL+ I Y + S
Sbjct: 4 MSTDKLAVLIDADNAQASV--------ISELLEEIAKFGITNIKRAY------GDWTTSQ 49
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
L + LH + Q ++F+ G+ SS+ ++ A+D L+ I S D
Sbjct: 50 LKGWKEHLHTHAIQ----PIQQFSYTNGKNATDSSLIID-AMDIL-HENRLDGFCIISSD 103
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182
FT L ++ KV + + S D F+ L+ I P + +
Sbjct: 104 SDFTRLATRIRESGLKVYGFGEQKTPEAFIS-----ACDKFVYTENLRE-IKEVPQTNNE 157
>gi|302692534|ref|XP_003035946.1| hypothetical protein SCHCODRAFT_232516 [Schizophyllum commune H4-8]
gi|300109642|gb|EFJ01044.1| hypothetical protein SCHCODRAFT_232516 [Schizophyllum commune H4-8]
Length = 1064
Score = 48.2 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 12/72 (16%)
Query: 99 DVELAVDAFEQSEGLE-----HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMAS 153
D L VD + + +V+ SGD F A L+ + ++ I+S P+ A
Sbjct: 85 DQMLQVDMLVFA--WDNPPPTTIVLISGDRDFAYAAAILRNRNFRIVIIS-----PAQAV 137
Query: 154 DQLRRQADYFMD 165
LR QA + D
Sbjct: 138 TCLREQATHVYD 149
>gi|326443231|ref|ZP_08217965.1| hypothetical protein SclaA2_19298 [Streptomyces clavuligerus ATCC
27064]
Length = 303
Score = 48.2 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 38/189 (20%), Positives = 66/189 (34%), Gaps = 37/189 (19%)
Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53
A+F+D +YA++ L FD+D +++AF +A ++R Y+Y
Sbjct: 39 AIFVDAGYVYAAAGLLVAGTEDRRAFDLDAEGMIEAFIDKARTIFADSRLLRVYWYDGAR 98
Query: 54 GD---PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110
PEQQ P K N + +D + D +
Sbjct: 99 RRIHTPEQQSIAELP---------------DVKVRLGNLNANNQQKGVDSLIRSDLESLA 143
Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDL 166
+ + GD + V A Q +V + +D S ++ L + D DL
Sbjct: 144 RHRAISDAALVGGDEDLVSAVEAAQGYGARVHLWGIEAADGSNQAEPLLWEVDSQRTFDL 203
Query: 167 AYLKNEIAR 175
+ + I R
Sbjct: 204 DFCRPYITR 212
>gi|262198573|ref|YP_003269782.1| hypothetical protein Hoch_5405 [Haliangium ochraceum DSM 14365]
gi|262081920|gb|ACY17889.1| protein of unknown function DUF88 [Haliangium ochraceum DSM 14365]
Length = 450
Score = 47.8 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 35/186 (18%), Positives = 58/186 (31%), Gaps = 23/186 (12%)
Query: 6 EKIALFIDGANLYAS--------SK---ALGFDIDYRKL---LKAFRSRAIVIRAYYYTT 51
+ AL ID N Y S ++ F D L + +I Y
Sbjct: 15 QHAALLIDLENFYLSRENGTLSEARGEVHYDFHRDLEILCRGAQRIAGDKRLIVRRAYAD 74
Query: 52 VVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTE--NCGRKRVKSSMDVELAVDAFEQ 109
S D+ + +++ + E + K++ D+ LA+DA
Sbjct: 75 FNAYRRSDDSARPYRKDYYLRHTPKLLMERGVEPVQVFRFPGGGNKNAADMRLAMDATTL 134
Query: 110 S---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
++ ++ +GD F L L+R V + S L R D F
Sbjct: 135 MAPPSCVDTFILVTGDADFIRLTLELRRCGAFVA----GIGVRETTSSVLPRYCDRFDYF 190
Query: 167 AYLKNE 172
L E
Sbjct: 191 TDLAGE 196
>gi|221065080|ref|ZP_03541185.1| protein of unknown function DUF88 [Comamonas testosteroni KF-1]
gi|220710103|gb|EED65471.1| protein of unknown function DUF88 [Comamonas testosteroni KF-1]
Length = 300
Score = 47.8 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 35/169 (20%), Positives = 56/169 (33%), Gaps = 29/169 (17%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
+ +IAL ID N A ID ++L + ++ Y + LH
Sbjct: 6 QPRIALLIDADN------APAEMID--EILTELSTFGLINIRRAY------GNWTKAGLH 51
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122
L + V + ++F + G+ D+ + VDA E +E + I S D
Sbjct: 52 GWQSKL--LEYAV--RPMQQFDYSKGKNAT----DMAMTVDAMELLYTEKPDAFGIVSSD 103
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
FT LV L+ K + F+ LK
Sbjct: 104 ADFTPLVMHLRAKGA--AVYGFGAEQ---TPKAFVNACSRFLYFDALKE 147
>gi|47104079|ref|YP_015508.1| hypothetical protein PBPRC0054 [Photobacterium profundum SS9]
gi|46911643|emb|CAG17992.1| conserved protein of unknown functions [Photobacterium profundum
SS9]
Length = 341
Score = 47.8 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 56/168 (33%), Gaps = 31/168 (18%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
M + K+ALFID N ASS L F +L ++ +
Sbjct: 1 MNTAQSKVALFIDADN--ASSSNLEF------VLSELKNHGDTC------IRKAFGNWKR 46
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG----LEHL 116
L L NG + V + + K++ D+ + + + ++ +
Sbjct: 47 PNLQSWEKILCKNGIESVQQ--------FDLTKNKNATDIAITISVMDFIHRKDLNVDTI 98
Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
+ + D FT LV +++ V + L+ +F+
Sbjct: 99 CLMTSDCDFTPLVTRVRQSGFNVICAGENKTPAP-----LKESCTHFI 141
>gi|296168350|ref|ZP_06850274.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295896781|gb|EFG76414.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 297
Score = 47.8 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 33/162 (20%), Positives = 55/162 (33%), Gaps = 20/162 (12%)
Query: 19 ASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78
+++ +D +L S I++ Y D + Q+V
Sbjct: 43 YANRLDRSTVDVGAILDFASSFGILVLTRAYADWSADINAGYRG-------------QLV 89
Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRK 135
A+ K+ D+ LAVDA E L H+VI +GD + L +R
Sbjct: 90 ARAVDLVQLFPAAAYGKNGADIRLAVDAVEDMFRLPDLTHVVIVAGDSDYIPLAQRCKRL 149
Query: 136 VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
+ V + + +S L D F+ L A +P
Sbjct: 150 GRYVVGIGVAGA----SSRALAAACDEFVVYDSLPGVPALEP 187
>gi|299753946|ref|XP_001833647.2| EDA32 [Coprinopsis cinerea okayama7#130]
gi|298410535|gb|EAU88192.2| EDA32 [Coprinopsis cinerea okayama7#130]
Length = 491
Score = 47.8 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Query: 99 DVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASD 154
D + VD + +V+ SGD + ++ L+ + V +++ + PS+ S
Sbjct: 83 DKMIIVDMLLYAMDNPAPATVVLISGDKDYAYAISVLRLRQYDVVVLTPPNASPSLTSH 141
>gi|166033313|ref|ZP_02236142.1| hypothetical protein DORFOR_03039 [Dorea formicigenerans ATCC
27755]
gi|166027670|gb|EDR46427.1| hypothetical protein DORFOR_03039 [Dorea formicigenerans ATCC
27755]
Length = 308
Score = 47.8 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 60/167 (35%), Gaps = 31/167 (18%)
Query: 9 ALFIDGANLYASSKALGFDIDYRK-LLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
AL ID N+ S+K Y K +L + Y + +
Sbjct: 7 ALLIDADNV--SAK-------YIKPILTELSKYGNITYKRIY------GDWTNTQHSSWK 51
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCF 125
D L N ++F+ G K+S D + +DA + ++ ++ I S D F
Sbjct: 52 DELLKNSIT----PIQQFSYTQG----KNSTDSAMIIDAMDILYAKDVDGFCIVSSDSDF 103
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
T LV+ L+ K V + + R+ D F L L +E
Sbjct: 104 TRLVSRLRESGKMVIGMGENKTPEPF-----RKACDKFTILENLLSE 145
>gi|41410167|ref|NP_963003.1| hypothetical protein MAP4069c [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41399000|gb|AAS06619.1| hypothetical protein MAP_4069c [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 292
Score = 47.8 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 43/189 (22%), Positives = 69/189 (36%), Gaps = 23/189 (12%)
Query: 7 KIALFIDGANLYASSK-----ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
++A+++D N+ S F D K L+ F R + +A + D F
Sbjct: 8 RVAVYLDFDNIVISRYDQIHGRNSFQRDKAKGLEQFTER--LEQATVDVGAILDFASSFG 65
Query: 62 PL---HPLLDWLHYN--GFQ--VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---E 111
L DW G++ +VA+ K+ D+ LAVDA E
Sbjct: 66 TLVLTRAYADWSAEINAGYRGQLVARAVDLVQLFPAAAYGKNGADIRLAVDAVEDMFRLP 125
Query: 112 GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
L H+VI +GD + L +R + V + + +S L D F+ L
Sbjct: 126 DLTHVVIVAGDSDYIPLAQRCKRLGRYVVGIGVAGA----SSRALAAACDEFVIYDALPG 181
Query: 172 E--IARDPD 178
+ R P
Sbjct: 182 VTALDRTPA 190
>gi|312879353|ref|ZP_07739153.1| protein of unknown function DUF88 [Aminomonas paucivorans DSM
12260]
gi|310782644|gb|EFQ23042.1| protein of unknown function DUF88 [Aminomonas paucivorans DSM
12260]
Length = 289
Score = 47.8 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 30/79 (37%), Gaps = 7/79 (8%)
Query: 99 DVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
D + +DA + + + + S D FT L + ++ + K+V + + S
Sbjct: 122 DSAMIIDAMDLLYTGRFDGFCLVSSDSDFTRLASRIREEGKRVVGFGEKKTPRAFVS--- 178
Query: 157 RRQADYFMDLAYLKNEIAR 175
D F+ L E R
Sbjct: 179 --ACDKFIYTELLVAETGR 195
>gi|114764063|ref|ZP_01443302.1| hypothetical protein 1100011001333_R2601_15432 [Pelagibaca
bermudensis HTCC2601]
gi|114543421|gb|EAU46436.1| hypothetical protein R2601_15432 [Roseovarius sp. HTCC2601]
Length = 236
Score = 47.8 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 32/84 (38%), Gaps = 7/84 (8%)
Query: 88 NCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTV 145
+ K+S D+ L +DA + + V+ S D FT L + ++ + V +
Sbjct: 66 SPANTVGKNSSDISLVIDAMDLMHTGRFDGFVVVSSDSDFTRLASRIREQGLDVYGMGMQ 125
Query: 146 LSDPSMASDQLRRQADYFMDLAYL 169
D R+ F+ L L
Sbjct: 126 K-----TPDAFRKACKRFIFLENL 144
>gi|284988699|ref|YP_003407253.1| hypothetical protein Gobs_0072 [Geodermatophilus obscurus DSM
43160]
gi|284061944|gb|ADB72882.1| hypothetical protein Gobs_0072 [Geodermatophilus obscurus DSM
43160]
Length = 268
Score = 47.8 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 45/111 (40%), Gaps = 12/111 (10%)
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
L ++ L GF V A+ ++ ++ + + +D +D S L LV+FSG
Sbjct: 130 SLQRWVEALRGFGFAVFARPKQQPDDDIDQ----AMLD---HIDVRRHSHRLRRLVVFSG 182
Query: 122 DG-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
DG F + L R +VT+V+ L F+D+ +
Sbjct: 183 DGRNFAEPLEELARTGTQVTVVAFSEVAGYAIGSDLL----EFIDIEDVPG 229
>gi|332139693|ref|YP_004425431.1| hypothetical protein MADE_1001420 [Alteromonas macleodii str. 'Deep
ecotype']
gi|327549715|gb|AEA96433.1| hypothetical protein MADE_1001420 [Alteromonas macleodii str. 'Deep
ecotype']
Length = 249
Score = 47.8 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 32/159 (20%), Positives = 54/159 (33%), Gaps = 25/159 (15%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
+K+A+ ID N S + +L + V+ Y D
Sbjct: 8 KKVAVLIDADNAQLSKLS--------AILDEISAHGHVLIKRAYGDWSID---ALKNWKT 56
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
L+ L + ++F G+ +SM ++ A+D SE ++ + S D F
Sbjct: 57 PLNELA-------IQPIQQFAYTTGKNATDASMIID-AMDLL-YSEKIDAFALVSSDSDF 107
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
T L + L+ K V V R D F+
Sbjct: 108 TKLASRLRESEKFVFGVGEKK-----TPVSFRNACDDFI 141
>gi|322696485|gb|EFY88277.1| hypothetical protein MAC_05750 [Metarhizium acridum CQMa 102]
Length = 251
Score = 47.8 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 33/86 (38%), Gaps = 7/86 (8%)
Query: 95 KSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMA 152
K+S D + +DA + S + + S D FT L + ++ V + ++
Sbjct: 74 KNSTDAAMVIDAMDLLYSNRFDGFCLVSSDSDFTRLASRIRESGLLVYGFGERKAPKALV 133
Query: 153 SDQLRRQADYFMDLAYLKNEIARDPD 178
S D F+ + L + PD
Sbjct: 134 S-----ACDKFIYIENLSQNVDFAPD 154
>gi|237800598|ref|ZP_04589059.1| hypothetical protein POR16_17368 [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331023458|gb|EGI03515.1| hypothetical protein POR16_17368 [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 274
Score = 47.8 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 13/64 (20%), Positives = 21/64 (32%), Gaps = 5/64 (7%)
Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
+ + + D F L L+ + V IV D LR +D F + +
Sbjct: 94 HRADMFCLVTSDSDFAYLCRKLRERGASVCIVG-----EPKTPDALRNASDQFFEWRRNE 148
Query: 171 NEIA 174
I
Sbjct: 149 EPIK 152
>gi|187940199|gb|ACD39327.1| hypothetical protein PACL_0668 [Pseudomonas aeruginosa]
Length = 274
Score = 47.8 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 19/55 (34%), Gaps = 5/55 (9%)
Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165
+ + + D F L L+ + V IV D LR +D F +
Sbjct: 94 SRADTFCLVTSDSDFAYLCRKLRERGAMVCIVG-----EPKTPDALRNSSDQFFE 143
>gi|254415491|ref|ZP_05029251.1| hypothetical protein MC7420_4949 [Microcoleus chthonoplastes PCC
7420]
gi|196177672|gb|EDX72676.1| hypothetical protein MC7420_4949 [Microcoleus chthonoplastes PCC
7420]
Length = 265
Score = 47.8 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 31/163 (19%), Positives = 56/163 (34%), Gaps = 24/163 (14%)
Query: 16 NLYASSKALGFDIDYRKLLKAFRSRAIVIRAY-YYTTVVGDPEQQFSPLHPLLDWLHYNG 74
NLY + + LL +++ ++ YY + + Q P L G
Sbjct: 17 NLYWDLQNVSIQKSAHLLLSFAQTQGHLLAQNVYYNSQCQNQAQAKKP-------LSRLG 69
Query: 75 FQVVAKV--AKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAAL 132
F K+ ++ + + + D +++ SGDG F LV L
Sbjct: 70 FDCRDVPCPLKDSADHQLIAHCLKDIHSDRSPDI---------IILVSGDGDFCPLVRNL 120
Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQA-DYFMDLAYLKNEIA 174
Q KKV I + + + +L+ D F + L +
Sbjct: 121 QSLDKKVIIFAQLGNVK----QKLKDLVQDDFYFVDQLPKLVQ 159
>gi|294495820|ref|YP_003542313.1| hypothetical protein Mmah_1163 [Methanohalophilus mahii DSM 5219]
gi|292666819|gb|ADE36668.1| protein of unknown function DUF88 [Methanohalophilus mahii DSM
5219]
Length = 169
Score = 47.8 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 31/166 (18%), Positives = 57/166 (34%), Gaps = 32/166 (19%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
R I L +DG N+ FD++ ++ + V + +
Sbjct: 23 RRSIGLLVDGPNV----LRKEFDVNLEEIRDVLKEYGNVKIGRVFL--------NQYASN 70
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGD 122
L++ + NGF+ V S +DV LAV+ + ++ L + + D
Sbjct: 71 KLVEAVENNGFEPVI--------------CSSDVDVRLAVEGMDLVHNPNIDTLALVTRD 116
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
F L+ K+ + + S LR +DY + L
Sbjct: 117 ADFKPLLNKANEHGKE----TIIFGVEPGFSTALRNSSDYVVILNT 158
>gi|153815213|ref|ZP_01967881.1| hypothetical protein RUMTOR_01447 [Ruminococcus torques ATCC 27756]
gi|317502327|ref|ZP_07960496.1| hypothetical protein HMPREF1026_02440 [Lachnospiraceae bacterium
8_1_57FAA]
gi|331089931|ref|ZP_08338823.1| hypothetical protein HMPREF1025_02406 [Lachnospiraceae bacterium
3_1_46FAA]
gi|145847472|gb|EDK24390.1| hypothetical protein RUMTOR_01447 [Ruminococcus torques ATCC 27756]
gi|316896283|gb|EFV18385.1| hypothetical protein HMPREF1026_02440 [Lachnospiraceae bacterium
8_1_57FAA]
gi|330403163|gb|EGG82724.1| hypothetical protein HMPREF1025_02406 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 323
Score = 47.8 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 38/168 (22%), Positives = 64/168 (38%), Gaps = 27/168 (16%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRK-LLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
E+ AL ID N+ S+K Y K +L V Y + GD + S
Sbjct: 3 ERFALLIDADNV--SAK-------YIKPILDELSKYGNVT----YKRIYGDWTRPNSA-- 47
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
+ L N ++F+ G+ S+M ++ A+D + LE + S D
Sbjct: 48 GWKEELLQNSIT----PIQQFSYTYGKNATDSAMIID-AMDML-YASELEGFCLVSSDSD 101
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
FT L + L+ K+V + + R+ + F +L L +
Sbjct: 102 FTRLASRLRESGKRVIGMGEAKTPLPF-----RKACEIFTELELLLED 144
>gi|225165548|ref|ZP_03727367.1| conserved hypothetical protein [Opitutaceae bacterium TAV2]
gi|224800202|gb|EEG18613.1| conserved hypothetical protein [Opitutaceae bacterium TAV2]
Length = 280
Score = 47.4 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 34/172 (19%), Positives = 60/172 (34%), Gaps = 32/172 (18%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
M + ++IA+ ID N+ S K + D LL R + + T+ +
Sbjct: 1 MENNDKRIAVLIDAENV--SFKLVDEIFDEIALLGRVTHRR--VYGDFTTSHMT------ 50
Query: 61 SPLHPLLDWLHYNGFQVVAKV--AKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHL 116
G+ VA ++ T+ K K+S D+ L +DA + + ++ +
Sbjct: 51 -------------GWNAVATDFALRQVTQRH-SKNGKNSSDIVLVIDAMDILHAGKVDAI 96
Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
I S D FT L + V L + + + F L
Sbjct: 97 CIVSNDNDFTRLAMRIVEAGLDV----IGLGEEGKTGHEFVKACSTFKHLTD 144
>gi|294677711|ref|YP_003578326.1| hypothetical protein RCAP_rcc02189 [Rhodobacter capsulatus SB 1003]
gi|294476531|gb|ADE85919.1| protein of unknown function DUF88 [Rhodobacter capsulatus SB 1003]
Length = 249
Score = 47.4 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 61/167 (36%), Gaps = 42/167 (25%)
Query: 5 REKIALFIDGANL---YASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
E +A+ +DG NL YA AL R+ V Y Q+ +
Sbjct: 1 METVAVLVDGDNLSARYAGQIALR-----------ARAFGTVTVRRVYL-----DAQKAT 44
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIF 119
GF+++ + K++ D+ LA+DA E + EG++ VI
Sbjct: 45 DWQG-----GPQGFRLM-----------HAGKGKNASDLLLALDAMELALREGVKRFVIA 88
Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
S D F+ L L+ ++VT + R + F+ L
Sbjct: 89 SSDRDFSHLALRLREYGRQVTGIGETK-----TPQIFRDACETFLTL 130
>gi|256832383|ref|YP_003161110.1| hypothetical protein Jden_1151 [Jonesia denitrificans DSM 20603]
gi|256685914|gb|ACV08807.1| hypothetical protein Jden_1151 [Jonesia denitrificans DSM 20603]
Length = 388
Score = 47.4 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 31/177 (17%), Positives = 58/177 (32%), Gaps = 32/177 (18%)
Query: 5 REKIALFIDGANLY--------ASSKALGFDIDYRKLLK------AFRSRAIVIRAYYYT 50
++ A+F+D L+ A+S + Y L++ S +R Y+Y
Sbjct: 2 NKQSAIFVDAGFLHSVGAQRTAATSYRHAVKLQYSTLIRGITHTTRAHSGVENLRTYWY- 60
Query: 51 TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110
+ + H + + G +V + E G +D+ LA+D +
Sbjct: 61 --DASRDGLLTDEHKRIAMIP--GVKVRLGRVNYYGEQKG-------VDLRLALDLVGLA 109
Query: 111 E--GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDP----SMASDQLRRQAD 161
+ SGD T V Q +V ++ + +D L D
Sbjct: 110 RTGAASVAYLISGDDDLTEAVEEAQSLGMRVVLLGIDDKSSRIGLASVADNLAFAVD 166
>gi|300024275|ref|YP_003756886.1| hypothetical protein Hden_2769 [Hyphomicrobium denitrificans ATCC
51888]
gi|299526096|gb|ADJ24565.1| protein of unknown function DUF88 [Hyphomicrobium denitrificans
ATCC 51888]
Length = 656
Score = 47.4 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 47/132 (35%), Gaps = 12/132 (9%)
Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG 112
D + +GF+V+ +++K+S D+ + +D +
Sbjct: 81 AHDNSTDMCSFPFIRHHFQRSGFEVIDCP-------PLTQQLKNSADIRIVMDVSDILNH 133
Query: 113 ---LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMA--SDQLRRQADYFMDLA 167
+ +I SGD FT ++ L+ ++ + + + SD +++D L
Sbjct: 134 PTFFDEFIILSGDADFTPVLHRLRAHARRTVVYANDHTALPYTAISDGEIKESDLLALLT 193
Query: 168 YLKNEIARDPDE 179
+ P E
Sbjct: 194 NSRAIAGETPRE 205
>gi|145296960|ref|YP_001139781.1| hypothetical protein cgR_2860 [Corynebacterium glutamicum R]
gi|140846880|dbj|BAF55879.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 472
Score = 47.4 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 33/172 (19%), Positives = 58/172 (33%), Gaps = 29/172 (16%)
Query: 6 EKIALFIDGANL---YA----SSKALGFDIDYRKLLKAFRS------RAIVIRAYYYTTV 52
E+ +F+D + L + + +ID +++ + V R +Y +
Sbjct: 3 ERTQVFVDTSYLLASFYNSWETGARAQLEIDLPEVVGVLGRMIEQQLKQPVQRQMWYDGI 62
Query: 53 VGDPEQQFSPLHPLLDWLHY-NGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS- 110
S H L +G Q+ A E+ G +R + ++D L D
Sbjct: 63 PD------SGPHRYQRALRTCDGVQLRAGQLIEW----GERRTQKAVDTRLVADLVLAGV 112
Query: 111 -EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
+V+ SGD V +V + SM+S LR D
Sbjct: 113 RGQCSDIVLVSGDADMIPGVQEAANAGLRVHLYGF--GWDSMSSQ-LRHCCD 161
>gi|23308996|ref|NP_602135.2| hypothetical protein NCgl2847 [Corynebacterium glutamicum ATCC
13032]
gi|62391787|ref|YP_227189.1| hypothetical protein cg3263 [Corynebacterium glutamicum ATCC 13032]
gi|21325721|dbj|BAC00342.1| Hypothetical protein [Corynebacterium glutamicum ATCC 13032]
gi|41327129|emb|CAF20973.1| conserved hypothetical protein [Corynebacterium glutamicum ATCC
13032]
Length = 472
Score = 47.4 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 33/172 (19%), Positives = 58/172 (33%), Gaps = 29/172 (16%)
Query: 6 EKIALFIDGANL---YA----SSKALGFDIDYRKLLKAFRS------RAIVIRAYYYTTV 52
E+ +F+D + L + + +ID +++ + V R +Y +
Sbjct: 3 ERTQVFVDTSYLLASFYNSWETGARAQLEIDLPEVVGVLGRMIEQQLKQPVQRQMWYDGI 62
Query: 53 VGDPEQQFSPLHPLLDWLHY-NGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS- 110
S H L +G Q+ A E+ G +R + ++D L D
Sbjct: 63 PD------SGPHRYQRALRTCDGVQLRAGQLIEW----GERRTQKAVDTRLVADLVLAGV 112
Query: 111 -EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
+V+ SGD V +V + SM+S LR D
Sbjct: 113 RGQCSDIVLVSGDADMIPGVQEAANAGLRVHLYGF--GWDSMSSQ-LRHCCD 161
>gi|51102893|gb|AAT96043.1| hypothetical protein [Pseudomonas viridiflava]
Length = 280
Score = 47.4 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 40/101 (39%), Gaps = 7/101 (6%)
Query: 76 QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQ 133
+V+ + + + + + K++ D L +DA + + + + S D FT L + L+
Sbjct: 69 KVLLENSIQPIQQFAYTKGKNATDSSLIIDAMDLLYTRRFDGFCLVSSDSDFTRLASRLR 128
Query: 134 RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
+ V + S S D F+ L+ E+
Sbjct: 129 EEGLTVYGFGEEKTPKSFVS-----ACDKFIYTELLRAEVQ 164
>gi|75674368|ref|YP_316789.1| hypothetical protein Nwi_0169 [Nitrobacter winogradskyi Nb-255]
gi|74419238|gb|ABA03437.1| Protein of unknown function DUF88 [Nitrobacter winogradskyi Nb-255]
Length = 271
Score = 47.4 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 34/186 (18%), Positives = 59/186 (31%), Gaps = 41/186 (22%)
Query: 3 DPREKI---ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
+PR+++ A+FID N V + +
Sbjct: 4 EPRQRLPRFAVFIDAEN--------------------------VPPKFADGIFREIAQLG 37
Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKS--SMDVELAVDAFEQSE--GLEH 115
+P+ + L + +V + + VK S D+ + +DA + +
Sbjct: 38 DAPVRLIYGNLSDPNLKGWTEVLPDHSLERRDPAVKGRNSADMAIVIDAMDLLHDGRIHG 97
Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
+ S D FT L A L+R+ V D RR + F+ L L + R
Sbjct: 98 FCLISSDSDFTGLAARLRREGANVYGFGEKK-----TPDCFRRACNRFISLESL---LPR 149
Query: 176 DPDEDK 181
P
Sbjct: 150 KPARKP 155
>gi|302558564|ref|ZP_07310906.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
gi|302476182|gb|EFL39275.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
Length = 305
Score = 47.4 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 34/186 (18%), Positives = 59/186 (31%), Gaps = 31/186 (16%)
Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAIVIRA-------YYYTTVV 53
A+F+D LYA++ L FD+D L+ A RA + A Y+Y
Sbjct: 42 AIFVDAGYLYAAAGRLVTGTEDRRAFDLDAEGLIDALIDRARTVFADSRLLRVYWYDGAR 101
Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
L K N + +D + D +
Sbjct: 102 RRIHTAEQQTIAELP------------DVKVRLGNLNANNQQKGVDSLIRSDLESLARHR 149
Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169
+ + GD + V A Q +V + + ++ L + D +DL +
Sbjct: 150 AISDAALLGGDEDLVSAVEAAQGYGARVHLWGIEAPEGRNQAEPLLWEVDSQRTLDLDFF 209
Query: 170 KNEIAR 175
K ++R
Sbjct: 210 KPYVSR 215
>gi|51102938|gb|AAT96087.1| hypothetical protein [Pseudomonas viridiflava]
Length = 280
Score = 47.4 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 40/101 (39%), Gaps = 7/101 (6%)
Query: 76 QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQ 133
+V+ + + + + + K++ D L +DA + + + + S D FT L + L+
Sbjct: 69 KVLLENSIQPIQQFAYTKGKNATDSSLIIDAMDLLYTRRFDGFCLVSSDSDFTRLASRLR 128
Query: 134 RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
+ V + S S D F+ L+ E+
Sbjct: 129 EEGLTVYGFGEEKTPKSFVS-----ACDKFIYTELLRAEVQ 164
>gi|328768035|gb|EGF78082.1| hypothetical protein BATDEDRAFT_26780 [Batrachochytrium
dendrobatidis JAM81]
Length = 491
Score = 47.4 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 35/105 (33%), Gaps = 16/105 (15%)
Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEH 115
+ + + + L +G V+ + D + VD +
Sbjct: 193 RETFIKSMRSELQSSGCSVIDTPHNGRKDAA---------DKMIMVDMLSYIIDTPAPAT 243
Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160
+V+ SGD F +A LQ + V ++ + LR QA
Sbjct: 244 IVLISGDRDFLYALAVLQNRGYNVVLIVPNRGASPI----LRAQA 284
>gi|110637857|ref|YP_678064.1| hypothetical protein CHU_1453 [Cytophaga hutchinsonii ATCC 33406]
gi|110280538|gb|ABG58724.1| conserved hypothetical protein [Cytophaga hutchinsonii ATCC 33406]
Length = 258
Score = 47.4 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 33/174 (18%), Positives = 56/174 (32%), Gaps = 35/174 (20%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
+K+A+ ID N+ S + +++L+ Y
Sbjct: 13 MKEDKLAVLIDADNVPYS--------NVKEMLEEISKNGTPTIKRIYA------------ 52
Query: 63 LHPLLDWLHY--NGFQ-VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLV 117
DW +G++ V+ + A + K+S D L +DA + S +
Sbjct: 53 -----DWTKPTVSGWKSVLLENAITPIQQYSYTTGKNSSDSALIIDAMDILYSGKVNGFC 107
Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
I S D FT L L+ V + S D F+ + LK
Sbjct: 108 IVSSDSDFTRLATRLREAGMTVIGFGEKKTPKPFIS-----ACDKFIYIEILKA 156
>gi|118470413|ref|YP_885602.1| hypothetical protein MSMEG_1210 [Mycobacterium smegmatis str. MC2
155]
gi|118171700|gb|ABK72596.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2
155]
Length = 289
Score = 47.4 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 46/140 (32%), Gaps = 20/140 (14%)
Query: 28 IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTE 87
+D +L S ++ Y D + Q+V +
Sbjct: 50 VDVGAILDFASSFGTLVLTRAYADWSADVNAGYRQ-------------QLVGRAVDLVQL 96
Query: 88 NCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVST 144
K+ D+ LAVDA E L H+VI +GD + L +R + V +
Sbjct: 97 FPAAAYGKNGADIRLAVDAVEDMFRLPDLTHVVIVAGDSDYIPLAQRCKRLGRYVVGIGV 156
Query: 145 VLSDPSMASDQLRRQADYFM 164
+ +S L D F+
Sbjct: 157 AGA----SSRALAAACDEFI 172
>gi|240171215|ref|ZP_04749874.1| hypothetical protein MkanA1_18021 [Mycobacterium kansasii ATCC
12478]
Length = 289
Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 58/189 (30%), Gaps = 41/189 (21%)
Query: 7 KIALFIDGANLYAS-----------SKALGFDIDYRKLL----------KAFRSRAIVIR 45
++A++ D N+ S K G +D +L S ++
Sbjct: 8 RVAVYFDFDNIVISRYDQVHGRGTFQKDKGKGLDPERLRAATVDLGAIMDFASSFGTLVL 67
Query: 46 AYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVD 105
Y + ++ Q+V + K+ D+ LAVD
Sbjct: 68 TRAYADWSAEVNARYHG-------------QLVGRAVDLVQLFPAAAYGKNGADIRLAVD 114
Query: 106 AFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162
A E L H+VI GD + L +R + V + + +S L D
Sbjct: 115 AVEDMFRLPDLTHVVIVGGDSDYIALAQRCKRLGRYVVGIGVAGA----SSQSLAAACDE 170
Query: 163 FMDLAYLKN 171
F+ L
Sbjct: 171 FVTYDTLPG 179
>gi|297202206|ref|ZP_06919603.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
gi|297148057|gb|EDY57683.2| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
Length = 300
Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 35/186 (18%), Positives = 65/186 (34%), Gaps = 31/186 (16%)
Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53
A+F+D LYA++ L FD+D L++A RA ++R Y+Y
Sbjct: 37 AIFVDAGYLYAAAGRLVAGTEDRRAFDLDAEGLIEALIDRARTIFADSRLLRVYWY---D 93
Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
G + + + L K N + +D + D +
Sbjct: 94 GARRRIHTTEQQSIAELP---------DVKVRLGNLNANNQQKGVDSLIRSDLESLARHR 144
Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169
+ + GD + V A Q +V + + ++ L + D +DL +
Sbjct: 145 AISDAALLGGDEDLVSAVEAAQGYGARVHLWGIEAPEGRNQAEPLLWEVDSQRTLDLDFF 204
Query: 170 KNEIAR 175
K ++R
Sbjct: 205 KPYVSR 210
>gi|294631254|ref|ZP_06709814.1| conserved hypothetical protein [Streptomyces sp. e14]
gi|292834587|gb|EFF92936.1| conserved hypothetical protein [Streptomyces sp. e14]
Length = 305
Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 35/186 (18%), Positives = 63/186 (33%), Gaps = 31/186 (16%)
Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAIVIRA-------YYYTTVV 53
A+F+D LYA++ L FD+D L+ A RA + A Y+Y
Sbjct: 41 AIFVDAGYLYAAAGRLVAGTEDRRAFDLDAEGLIDALIDRARTVFADSRLLRVYWY---D 97
Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
G + + + L K N + +D + D +
Sbjct: 98 GARRRIHTAEQQSIAELP---------DVKVRLGNLNANNQQKGVDSLIRSDLESLARHR 148
Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169
+ + GD + V A Q +V + + ++ L + D +DL +
Sbjct: 149 AISDAALLGGDEDLVSAVEAAQGYGARVHLWGIEAPEGRNQAEPLLWEVDSQRTLDLDFF 208
Query: 170 KNEIAR 175
K ++R
Sbjct: 209 KPYVSR 214
>gi|302341970|ref|YP_003806499.1| hypothetical protein Deba_0533 [Desulfarculus baarsii DSM 2075]
gi|301638583|gb|ADK83905.1| protein of unknown function DUF88 [Desulfarculus baarsii DSM 2075]
Length = 438
Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 62/168 (36%), Gaps = 19/168 (11%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
+ IA++ D N+++S L + D+ L FR + + Q ++
Sbjct: 1 MKNIAVYWDFENIHSSLCNLRYGEDW---LDQFRGQRHPAVVDIGAIMQFAESQGSVNIN 57
Query: 65 P-LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSS-----MDVELAVDAF---EQSEGLEH 115
+W Y + + EFT + + + D+ LA+DA + E L
Sbjct: 58 KAYGNWAWYQQY---SHDLHEFTFDLVQLFPRGMNMKNGADIRLAIDALDDLNRHEHLSV 114
Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163
+I GD + +L ++++ K++ + + + F
Sbjct: 115 FIIVGGDSDYISLAQRVRQRGKEI----IGIGVRETTNKFWINACNDF 158
>gi|71004032|ref|XP_756682.1| hypothetical protein UM00535.1 [Ustilago maydis 521]
gi|46095754|gb|EAK80987.1| hypothetical protein UM00535.1 [Ustilago maydis 521]
Length = 847
Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 51/146 (34%), Gaps = 15/146 (10%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDY--RKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
D E IA+F D N + + G + R ++ F ++ Y + + +
Sbjct: 85 DDAEPIAIFWDVDNCAPPTGSSGRSVALAVRTAIQNFEIGP-IVSFKAYLELSSETQAPN 143
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLV 117
+ L L G ++ GRK V D + D + +V
Sbjct: 144 AAQVQLRSELQGCGVSLIDTPK------SGRKDV---ADKMMITDLLAYAIDQPAPATVV 194
Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVS 143
+ SGD F + L+ + V +V+
Sbjct: 195 LISGDRDFAYPLGILRNRGYNVVLVT 220
>gi|240103392|ref|YP_002959701.1| hypothetical protein TGAM_1335 [Thermococcus gammatolerans EJ3]
gi|239910946|gb|ACS33837.1| Conserved hypothetical protein [Thermococcus gammatolerans EJ3]
Length = 166
Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 61/164 (37%), Gaps = 32/164 (19%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
P++KI L IDG N+ F I +++A V A Q++P
Sbjct: 19 HPKKKIGLIIDGPNI----LRKEFGIKLEDIIEALNRIGSVRIAKVIL-------NQYAP 67
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
L++ + G + V V DV +A++ E + ++ + + S
Sbjct: 68 -QGLVEAIVNQGLEPVI--------------VAGDTDVRVAIETMEMIYTADVDVIALAS 112
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
D F L+ +R K+ ++ S L+ ADY +
Sbjct: 113 RDADFLPLIIEAKRHGKETVVIGVEPGF----SVALQNAADYVI 152
>gi|325186423|emb|CCA20928.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 304
Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 37/181 (20%), Positives = 67/181 (37%), Gaps = 19/181 (10%)
Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAI-VIRAYYYTTVVGDPEQQFSPLHPL 66
AL IDGA + + G +DY KL K + IR +Y D + + +
Sbjct: 11 TALIIDGAYAEINGQKKG-GLDYLKLRKFLEEKGKAQIRERWY--FTHDRRKYTTSFFTM 67
Query: 67 LDWLHYNG--FQVVAKVAKEFTENCGR------KRVKSSMDVELAVDAFEQS--EGLEHL 116
+ G FQ+ K + C R + V+ +D +A + +
Sbjct: 68 IKSAPPLGPQFQLKVYGTKSYACRCKRCHYRFSQFVQKGVDNGIATKLLSLAYENVCDRF 127
Query: 117 VIFSGDGCFTTLVAALQR-KVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
++ +GDG F + ++ K++ +V S S L++ A + L + R
Sbjct: 128 ILLAGDGDFYDSLYQVKNVLRKEIWVVGFRDS----VSADLQQLASMIIWLDDHWQGVQR 183
Query: 176 D 176
Sbjct: 184 H 184
>gi|237808105|ref|YP_002892545.1| hypothetical protein Tola_1344 [Tolumonas auensis DSM 9187]
gi|237500366|gb|ACQ92959.1| protein of unknown function DUF88 [Tolumonas auensis DSM 9187]
Length = 277
Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 36/174 (20%), Positives = 57/174 (32%), Gaps = 29/174 (16%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
+P ++A+ ID N AS ID LLK S A S
Sbjct: 14 EPTLRLAVLIDADNAQASV------ID--GLLKEVASFGE---ATVKRIYGDFTSPASSQ 62
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
+L+ K ++F G+ D L +DA + + + + S
Sbjct: 63 WKKVLNQYA-------IKPVQQFAYTTGKNAT----DSTLIIDAMDLLYTRRFDGFCLVS 111
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
D FT L ++ + +TIV D R F+ YL+ +
Sbjct: 112 SDSDFTGLALRIREEG--LTIVGFGEQK---TPDAFRNACHKFIFTEYLRPTVQ 160
>gi|332672160|ref|YP_004455168.1| hypothetical protein Celf_3674 [Cellulomonas fimi ATCC 484]
gi|332341198|gb|AEE47781.1| hypothetical protein Celf_3674 [Cellulomonas fimi ATCC 484]
Length = 377
Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 69/189 (36%), Gaps = 32/189 (16%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRK-LLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
++A++ID N+ S +D +R+ + +R + A V + +
Sbjct: 8 RVAVYIDFDNIVIS----RYDQTFRRGEWQRDSARQHRMDAASDDLVDRRLAEARVDVGA 63
Query: 66 LLDWLHYNGFQVVAKVA------------KEFTENCGRKR--------VKSSMDVELAVD 105
+LD+ G VV++ ++ + VK+ D+ L+VD
Sbjct: 64 ILDYASSFGSVVVSRAYADWSVPANAGYQRQLVDRAVDLTQLFPVTAGVKNGADIRLSVD 123
Query: 106 AFE---QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162
E + + H+V+ +GD + L +R + V + + S L D
Sbjct: 124 VVEDLFRLPDVTHVVVVAGDSDYIALAQRAKRLGRYVVGIGVAGA----TSRALMAACDE 179
Query: 163 FMDLAYLKN 171
F D L +
Sbjct: 180 FADYDDLLD 188
>gi|319948971|ref|ZP_08023074.1| hypothetical protein ES5_06227 [Dietzia cinnamea P4]
gi|319437361|gb|EFV92378.1| hypothetical protein ES5_06227 [Dietzia cinnamea P4]
Length = 361
Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 30/92 (32%), Gaps = 14/92 (15%)
Query: 90 GRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLS 147
G +R + ++D L D + + +V+ +GD V ++ +V
Sbjct: 10 GERRTQKAVDTLLVADMIQAAYKGHCSDMVLVTGDADMIPGVRVAVDAGVRMHLVGFGWD 69
Query: 148 DPSMASDQLRRQAD---------YFMDLAYLK 170
S LR D F D ++
Sbjct: 70 S---ISSALRHACDTTTVLDPRTDFHDAMQIR 98
>gi|302890921|ref|XP_003044343.1| hypothetical protein NECHADRAFT_62469 [Nectria haematococca mpVI
77-13-4]
gi|256725266|gb|EEU38630.1| hypothetical protein NECHADRAFT_62469 [Nectria haematococca mpVI
77-13-4]
Length = 262
Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 33/165 (20%), Positives = 57/165 (34%), Gaps = 29/165 (17%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
K+A+ ID N+ + + G ++L I Y + L+
Sbjct: 8 KLAVLIDSDNV--TPRVAG------QVLAEVAKYGIAFVKRAY------GDWTGPGLNSW 53
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124
D L N Q ++F+ G K+S D + +DA + S + + S D
Sbjct: 54 KDHLLDNSIQ----PIQQFSYTKG----KNSTDSAMIIDAMDLLYSNKFDGFCLVSSDSD 105
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
FT L + ++ V + L R D F+ + L
Sbjct: 106 FTRLASRIRESGLVVYGFGERK-----TPNSLVRACDKFIYIENL 145
>gi|21673303|ref|NP_661368.1| hypothetical protein CT0467 [Chlorobium tepidum TLS]
gi|21646394|gb|AAM71710.1| conserved hypothetical protein [Chlorobium tepidum TLS]
Length = 426
Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 34/184 (18%), Positives = 58/184 (31%), Gaps = 29/184 (15%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
M RE IA+ ID N + ID+ +L +V Y +
Sbjct: 1 MEHSRETIAMLIDADN------SPSDKIDF--ILAEMAKYGVVNIRRAY------GNWKS 46
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118
L D LH + + + ++F G+ D+ + +D + S+ L+ I
Sbjct: 47 HSLKGWEDKLHD--YAI--RPIQQFDYTKGKNAT----DMAMTIDGMDLLFSKKLDAFCI 98
Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
S D FT LV + + V F+ L E +
Sbjct: 99 VSSDSDFTPLVMRILSEGLNV-----YGFGQKSTPLPFVNACSTFLYLDSFAGEKEQTKS 153
Query: 179 EDKK 182
+ +
Sbjct: 154 DSCR 157
>gi|316935522|ref|YP_004110504.1| hypothetical protein Rpdx1_4219 [Rhodopseudomonas palustris DX-1]
gi|315603236|gb|ADU45771.1| hypothetical protein Rpdx1_4219 [Rhodopseudomonas palustris DX-1]
Length = 266
Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 36/95 (37%), Gaps = 7/95 (7%)
Query: 77 VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQR 134
++AK A + K++ D+ L +DA + S + + S D FT L + ++
Sbjct: 57 ILAKHAIIPQQQFAYTTGKNASDITLVIDAMDLLHSGRFDGFCLVSSDSDFTRLASRIRE 116
Query: 135 KVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
+ V + + R+ F+ L
Sbjct: 117 QGVDV----FGFGEQK-TPESFRQACRRFVYTENL 146
>gi|260428850|ref|ZP_05782827.1| conserved hypothetical protein [Citreicella sp. SE45]
gi|260419473|gb|EEX12726.1| conserved hypothetical protein [Citreicella sp. SE45]
Length = 236
Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 29/73 (39%), Gaps = 7/73 (9%)
Query: 99 DVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
D+ L +DA + + V+ S D FT L + ++ + + + + D
Sbjct: 77 DISLVIDAMDLMHTARFDGFVLVSSDSDFTRLASRIREQG----LDAYGMGMQK-TPDAF 131
Query: 157 RRQADYFMDLAYL 169
R+ F+ L L
Sbjct: 132 RKACKRFIFLENL 144
>gi|329939623|ref|ZP_08288924.1| hypothetical protein SGM_4416 [Streptomyces griseoaurantiacus M045]
gi|329301193|gb|EGG45088.1| hypothetical protein SGM_4416 [Streptomyces griseoaurantiacus M045]
Length = 302
Score = 47.0 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 34/186 (18%), Positives = 65/186 (34%), Gaps = 31/186 (16%)
Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53
A+F+D LYA++ L FD+D L++A +A ++R Y+Y
Sbjct: 38 AIFVDAGYLYAAAGRLVAGTEDRRAFDVDAEGLIEALIDKARTIFADSRLLRVYWY---D 94
Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
G + + + L K N + +D + D +
Sbjct: 95 GARRRIHTAEQQSIAELP---------DVKVRLGNLNANNQQKGVDSLIRSDLESLARHR 145
Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169
+ + GD + V A Q +V + + ++ L + D +DL +
Sbjct: 146 AISDAALLGGDEDLVSAVEAAQGYGARVHLWGIEAPEGRNQAEPLLWEVDSQRTLDLDFF 205
Query: 170 KNEIAR 175
K ++R
Sbjct: 206 KPYVSR 211
>gi|323508074|emb|CBQ67945.1| conserved hypothetical protein [Sporisorium reilianum]
Length = 856
Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 51/146 (34%), Gaps = 15/146 (10%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRS--RAIVIRAYYYTTVVGDPEQQF 60
+ E IA+F D N + + G + + A ++ ++ Y + + +
Sbjct: 86 EDTEPIAIFWDVDNCAPPTGSSGRSVAL-AVRSAIQNLDVGPIVSFKAYLELSSETQAPN 144
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLV 117
+ L L G ++ GRK V D + D + +V
Sbjct: 145 AAQVQLRSELQGCGVSLIDTPK------SGRKDV---ADKMMITDLLAYAIDQPAPATVV 195
Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVS 143
+ SGD F + L+ + V +V+
Sbjct: 196 LISGDRDFAYPLGILRNRGYNVVLVT 221
>gi|332653782|ref|ZP_08419526.1| conserved hypothetical protein [Ruminococcaceae bacterium D16]
gi|332516868|gb|EGJ46473.1| conserved hypothetical protein [Ruminococcaceae bacterium D16]
Length = 291
Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 35/92 (38%), Gaps = 11/92 (11%)
Query: 81 VAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKK 138
++++ G K+S D + +DA + S + V+ S D FT L L+ K
Sbjct: 94 PIQQYSYTTG----KNSTDSAMIIDAMDILYSGTCDGFVLVSSDSDFTRLATRLREAGMK 149
Query: 139 VTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
V + + D F+ + ++
Sbjct: 150 VYGMGEKKTPKPF-----IVACDKFVYIEVIR 176
>gi|315231506|ref|YP_004071942.1| hypothetical protein TERMP_01744 [Thermococcus barophilus MP]
gi|315184534|gb|ADT84719.1| hypothetical protein TERMP_01744 [Thermococcus barophilus MP]
Length = 175
Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 32/171 (18%), Positives = 61/171 (35%), Gaps = 36/171 (21%)
Query: 8 IALFIDGANLYASSKALGFDI-DYRKLLKAFRS-RAIVIRAYYYTTVVGDPEQQFSPLHP 65
I L IDG N+ K G + D ++ L+ R + Y
Sbjct: 27 IGLIIDGPNILR--KEFGIRLEDIKEALERIGKIRVAKVVLNQYAP------------QG 72
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDG 123
L++ + GF+ + V DV +A++A E ++ + I + D
Sbjct: 73 LIEAVVNQGFEPII--------------VAGDTDVRIAIEAMELIYNSDVDIIAIATRDA 118
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
F +++ +RK K+ ++ S L+ ADY + + +
Sbjct: 119 DFLPIISEAKRKGKETIVIGVEPGF----SVALQNAADYVIKMEGRGEGVG 165
>gi|110833552|ref|YP_692411.1| hypothetical protein ABO_0691 [Alcanivorax borkumensis SK2]
gi|110646663|emb|CAL16139.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
Length = 252
Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 49/121 (40%), Gaps = 12/121 (9%)
Query: 68 DWLHYN--GFQ-VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122
DW N G++ V+ K + + + + K++ D + +DA + S+ L + S D
Sbjct: 53 DWTKPNLGGWKSVLLKHSIQPIQQFAYTQGKNATDCSMIIDAMDLLYSKQLSGFCLVSSD 112
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE--IARDPDED 180
FT L A L+ + V + + D F+ L+++ PD+
Sbjct: 113 SDFTRLAARLREEGLTVYGFGERKTPGPFVA-----ACDKFIYTEVLRSDHAPQHTPDKP 167
Query: 181 K 181
+
Sbjct: 168 Q 168
>gi|90418798|ref|ZP_01226709.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90336878|gb|EAS50583.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 273
Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 18/98 (18%), Positives = 37/98 (37%), Gaps = 7/98 (7%)
Query: 77 VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQR 134
V+++ A + K++ D+ L +DA + S + + S D FT L A ++
Sbjct: 59 VLSRHAIIPQQQFAYTTGKNASDITLVIDAMDLLHSGRFDGFCLVSSDSDFTRLAARIRE 118
Query: 135 KVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
+ V + + R+ F+ L +
Sbjct: 119 QG--VDVYGFGEQK---TPESFRQACRRFIYTENLLPQ 151
>gi|189016716|ref|YP_001711755.1| hypothetical protein CMS_pCSL0024 [Clavibacter michiganensis subsp.
sepedonicus]
gi|167728887|emb|CAQ03269.1| hypothetical protein pCSL0024 [Clavibacter michiganensis subsp.
sepedonicus]
Length = 195
Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 52/165 (31%), Gaps = 24/165 (14%)
Query: 10 LFIDGANLYASS----KALGFDIDYRKLLKAFRSRAIVIRAYY--------------YTT 51
LFID NL+ S+ + G + Y L+ + V+ A Y
Sbjct: 6 LFIDYQNLHFSAWETFTSYGSAV-YDSLIHPGKFGDQVLAARAARNFPELELTKIHVYRG 64
Query: 52 V---VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE 108
+ +P Q +W + + K + + +DV LA+ +
Sbjct: 65 LPSRKREPGQHARVQRQASNWTRDPRVVMSLRALKYPRDWPDEPSQEKGIDVLLAIQVVQ 124
Query: 109 QS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151
S + L++ + D + +Q ++T +
Sbjct: 125 ASIESAADTLIVSTRDTDILPALELVQSTGNTALELATWKGQSEL 169
>gi|29829642|ref|NP_824276.1| hypothetical protein SAV_3100 [Streptomyces avermitilis MA-4680]
gi|29606750|dbj|BAC70811.1| hypothetical protein [Streptomyces avermitilis MA-4680]
Length = 298
Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 33/186 (17%), Positives = 64/186 (34%), Gaps = 31/186 (16%)
Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53
A+F+D LYA++ L F++D L++A +A ++R Y+Y
Sbjct: 34 AIFVDAGYLYAAAGRLVAGTEDRRAFELDAEGLIEALIDKARTIFADSRLLRVYWY---D 90
Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
G + + + L K N + +D + D +
Sbjct: 91 GARRRIHTAEQQSIAELP---------DVKVRLGNLNANNQQKGVDSLIRTDLESLARHR 141
Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169
+ + GD + V A Q +V + + ++ L + D DL +
Sbjct: 142 AISDAALLGGDEDLVSAVEAAQGYGARVHLWGIEAPEGRNQAEPLLWEVDSQRTFDLDFF 201
Query: 170 KNEIAR 175
K ++R
Sbjct: 202 KPYVSR 207
>gi|299133322|ref|ZP_07026517.1| protein of unknown function DUF88 [Afipia sp. 1NLS2]
gi|298593459|gb|EFI53659.1| protein of unknown function DUF88 [Afipia sp. 1NLS2]
Length = 245
Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 37/95 (38%), Gaps = 7/95 (7%)
Query: 77 VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQR 134
++ + A + + + K++ D+ L +DA + S + + S D FT L + L+
Sbjct: 57 ILQRHAIDPYQQFAYTKGKNASDIALVIDAMDLLHSGRFDGFCLVSSDSDFTRLASRLRE 116
Query: 135 KVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
+ V T + R+ F+ L
Sbjct: 117 QGADVYGFGTQK-----TPESFRQACRRFVYTENL 146
>gi|319943364|ref|ZP_08017646.1| hypothetical protein HMPREF0551_0492 [Lautropia mirabilis ATCC
51599]
gi|319743179|gb|EFV95584.1| hypothetical protein HMPREF0551_0492 [Lautropia mirabilis ATCC
51599]
Length = 323
Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 29/70 (41%), Gaps = 5/70 (7%)
Query: 98 MDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVS---TVLSDPSMA 152
+D + D E + + + +GDG F + Q+K ++ ++ T L
Sbjct: 107 VDSLIVTDLIELASNGAISDAALVTGDGDFAIGIEMAQKKGVRIAVIGVEDTELGVSHRQ 166
Query: 153 SDQLRRQADY 162
S ++ +AD
Sbjct: 167 SFEITSRADR 176
>gi|304314246|ref|YP_003849393.1| hypothetical protein MTBMA_c04840 [Methanothermobacter marburgensis
str. Marburg]
gi|302587705|gb|ADL58080.1| conserved hypothetical protein [Methanothermobacter marburgensis
str. Marburg]
Length = 173
Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 59/161 (36%), Gaps = 32/161 (19%)
Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
I L +DG N+ +L D+ + + + R + Y + L+
Sbjct: 26 IGLLVDGPNMLRKEFSLNLDLVRKIMSEYGNMRVGKVLLNQYASD------------KLI 73
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCF 125
+ + GF + V DV +AV+A E ++ + + + D F
Sbjct: 74 EAIVNQGFTPIV--------------VAGDTDVYMAVEAMELIYNPNIDIIALMTRDADF 119
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
++ + K ++ ++P ++ L+ AD+ + L
Sbjct: 120 LPIINKAKENGKDTIVIG---AEPGFSA-ALQNSADHAIIL 156
>gi|288561663|ref|YP_003429069.1| hypothetical protein BpOF4_20909 [Bacillus pseudofirmus OF4]
gi|288548295|gb|ADC52177.1| hypothetical protein BpOF4_20909 [Bacillus pseudofirmus OF4]
Length = 191
Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 95 KSSMDVELAVDAFEQS-EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIV 142
+ +DVELA+D ++++ EG E L++FSGD + + KV V
Sbjct: 97 EKGVDVELALDIYQKALEGYELLIVFSGDSDLVPAIERAKALGTKVVAV 145
>gi|148550669|ref|YP_001260108.1| hypothetical protein Swit_5232 [Sphingomonas wittichii RW1]
gi|148503088|gb|ABQ71341.1| protein of unknown function DUF88 [Sphingomonas wittichii RW1]
Length = 284
Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 56/170 (32%), Gaps = 29/170 (17%)
Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
P +IAL ID N+ + +G +L Y + L
Sbjct: 11 PTRRIALLIDADNVSHA--KIG------AILAELSKYGTANIRRAY------GNWAAATL 56
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSG 121
LH + ++F+ + G+ D+ L +DA E ++ L+ I S
Sbjct: 57 KGWTGKLHDF----AIRPIQQFSYSTGKNAT----DIALVIDAMELLYTQDLDAFAIASS 108
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
D FT L+ L+ +V + F+ L L++
Sbjct: 109 DADFTPLIMQLKANGHEVYGFGERKTPTPFV-----NACTTFLFLDGLED 153
>gi|319953532|ref|YP_004164799.1| hypothetical protein Celal_2004 [Cellulophaga algicola DSM 14237]
gi|319422192|gb|ADV49301.1| Domain of unknown function DUF88 [Cellulophaga algicola DSM 14237]
Length = 252
Score = 46.7 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 40/103 (38%), Gaps = 7/103 (6%)
Query: 82 AKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKV 139
A + G K++ D + +DA + SE + + S D FT L L+ KV
Sbjct: 59 AITPIQQYGYTTGKNATDSAMIIDAMDILYSEKVNGFCLVSSDSDFTRLATRLREAGMKV 118
Query: 140 TIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182
+ + D F+ + LK++I ++ +K
Sbjct: 119 IGIGEKKTPNPF-----IVACDKFIYIEILKSKIESPENDSEK 156
>gi|302385690|ref|YP_003821512.1| hypothetical protein Closa_1286 [Clostridium saccharolyticum WM1]
gi|302196318|gb|ADL03889.1| conserved hypothetical protein [Clostridium saccharolyticum WM1]
Length = 308
Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 58/171 (33%), Gaps = 29/171 (16%)
Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
+K A+ ID N+ S+K + +L ++ Y + S +
Sbjct: 3 SDKKFAVLIDSDNI--SAKYITC------ILDEMTRYGVITYKRIY------GDWTSSQM 48
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSG 121
L N ++F+ G+ D L +DA + ++ ++ I S
Sbjct: 49 GKWKMELLENSIT----PIQQFSNTVGKNAT----DSALIIDAMDLLYTDHVDGFCIVSS 100
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
D FT L + L+ K+V + R F +L L ++
Sbjct: 101 DSDFTRLASRLRESGKEVIGMGEDK-----TPKSFRAACTVFTNLEVLLDQ 146
>gi|304315197|ref|YP_003850344.1| hypothetical protein MTBMA_c14520 [Methanothermobacter marburgensis
str. Marburg]
gi|302588656|gb|ADL59031.1| conserved hypothetical protein [Methanothermobacter marburgensis
str. Marburg]
Length = 157
Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 31/168 (18%), Positives = 62/168 (36%), Gaps = 36/168 (21%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRK--LLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ ++ + L +DG N+ K D+D+ K L+ R + Y +
Sbjct: 17 EDKKNLGLLVDGPNMLR--KEFCSDLDFVKNLLVDRGNLRVGKVLLNQYASD-------- 66
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVI 118
L++ + GF + V +DV+LAV+AFE ++ + +
Sbjct: 67 ----KLIEAVVNQGFSPMI--------------VAGDVDVQLAVEAFELIHNPHIDVVAL 108
Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
+ + F L+ + K+ ++ S L+ AD + L
Sbjct: 109 MTRNADFLPLINIAKENGKETLVIGAEPGF----SIALQNSADDSIKL 152
>gi|149203752|ref|ZP_01880721.1| hypothetical protein RTM1035_06788 [Roseovarius sp. TM1035]
gi|149142869|gb|EDM30911.1| hypothetical protein RTM1035_06788 [Roseovarius sp. TM1035]
Length = 232
Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 33/176 (18%), Positives = 61/176 (34%), Gaps = 45/176 (25%)
Query: 2 FDPREKIALFIDGANL--YASSKALGFDIDYRKLLKAFRSRAI--VIRAYYYTTVVGDPE 57
P +++ F+D N+ + R +L R ++RAY ++ D
Sbjct: 9 LTPAPRLSAFVDAENIPVTHA----------RTILDLARRYGDPDLLRAYGNVGLLSD-- 56
Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEH 115
W GFQ + K++ D+ + VDA E S+
Sbjct: 57 -----------WDKLPGFQFI-----------HSGCGKNATDMLICVDAMERALSDQCAA 94
Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
+++ S D FT L L+ V + + + S++ R F +L +
Sbjct: 95 VLLVSSDQDFTHLATRLRGYGLTV-----IGAGEAKTSERFRAACSVFEELEGCRE 145
>gi|84495933|ref|ZP_00994787.1| hypothetical protein JNB_00400 [Janibacter sp. HTCC2649]
gi|84382701|gb|EAP98582.1| hypothetical protein JNB_00400 [Janibacter sp. HTCC2649]
Length = 309
Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 50/155 (32%), Gaps = 21/155 (13%)
Query: 21 SKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAK 80
++ ++D ++ S V Y + H L+D A
Sbjct: 48 TRLAQAEVDLGAIIDYASSFGTVALTRAYADWSVPANAAYK--HQLID---------RAV 96
Query: 81 VAKEFTENCGRKRVKSSMDVELAVDAFE-QSEGLE--HLVIFSGDGCFTTLVAALQRKVK 137
+ G K+ D+ L++DA + + H+VI +GD + L +R +
Sbjct: 97 DLVQLFATSGT---KNGADIRLSIDAVNDLVDHKDLTHVVIVAGDSDYIALAQRCRRMGR 153
Query: 138 KVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
V + S S L D F D L
Sbjct: 154 FVVGIGVTGS----TSRALVAACDEFSDYGDLPGV 184
>gi|329850271|ref|ZP_08265116.1| hypothetical protein ABI_31720 [Asticcacaulis biprosthecum C19]
gi|328840586|gb|EGF90157.1| hypothetical protein ABI_31720 [Asticcacaulis biprosthecum C19]
Length = 240
Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 33/184 (17%), Positives = 70/184 (38%), Gaps = 16/184 (8%)
Query: 5 REKIALFIDGANLYASSKALGFD----IDYRKLLKAFRSRAI----VIRAYYYTTVVGDP 56
R++ A + DG NLY + A ++ + L +A R+ V+ Y
Sbjct: 16 RQRAAFYFDGFNLYHAVDAYKRPYLKWLNLKALARAVAPRSEAIKRVVWCSAYRPQNKSK 75
Query: 57 EQQFSPLHPLLDW---LHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
++ L+ + G V A + + + ++ DV LA+ +E
Sbjct: 76 LKRHEDYRKALEGQGVICRMGHFVHASDSCNACGHNWQLHIEKQGDVNLALSIAADAEDD 135
Query: 113 -LEHLVIFSGDGCFTTLVAALQRKV--KKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
+ + + DG ++ + KK+ +VS P+ ++L +D+A+L
Sbjct: 136 LFDVCYLVTADGDHAATARYIRERFPKKKLVLVSPPGRHPNRHIERLAHACVE-IDMAHL 194
Query: 170 KNEI 173
+ +
Sbjct: 195 EASL 198
>gi|327482222|gb|AEA85532.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166]
Length = 277
Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 39/108 (36%), Gaps = 7/108 (6%)
Query: 76 QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQ 133
+V+ + + + K++ D L +DA + + + + S D FT L A ++
Sbjct: 60 KVLLDHSIQPIQQFAYTSGKNATDSSLIIDAMDLLYTRRFDGFCLVSSDSDFTRLAARIR 119
Query: 134 RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
+ V + S D F+ L+ + A+ E
Sbjct: 120 EEGLTVYGFGEQKTPSPFVS-----ACDKFIYTEILRADAAKASVEPP 162
>gi|16519880|ref|NP_444000.1| hypothetical 23.5 kDa protein [Sinorhizobium fredii NGR234]
gi|2496724|sp|P55589|Y4OD_RHISN RecName: Full=Uncharacterized protein y4oD
gi|2182554|gb|AAB91797.1| hypothetical 23.5 kDa protein [Sinorhizobium fredii NGR234]
Length = 214
Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 31/75 (41%), Gaps = 4/75 (5%)
Query: 89 CGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVL 146
G+ + K +D + D E + + +V+ SGD V Q +V ++ +
Sbjct: 22 NGQGQQKG-VDSLIVTDLIELARQRAISEVVLLSGDEDVRVGVQIAQNYGVRVHLLG-IH 79
Query: 147 SDPSMASDQLRRQAD 161
S LR++AD
Sbjct: 80 PARGSQSPTLRQEAD 94
>gi|126433513|ref|YP_001069204.1| hypothetical protein Mjls_0904 [Mycobacterium sp. JLS]
gi|126233313|gb|ABN96713.1| protein of unknown function DUF88 [Mycobacterium sp. JLS]
Length = 311
Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 46/140 (32%), Gaps = 20/140 (14%)
Query: 28 IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTE 87
+D ++ S ++ Y D + Q+VA+
Sbjct: 58 VDIGAVIDFASSFGTLVLTRAYADWSSDVNANYRG-------------QLVARAVDLVQL 104
Query: 88 NCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVST 144
K+ D+ LAVDA E L H+VI GD + L +R + V +
Sbjct: 105 FPAAAYGKNGADIRLAVDAVEDMFRLPDLTHVVIVGGDSDYIALAQRCKRLGRYVVGIGV 164
Query: 145 VLSDPSMASDQLRRQADYFM 164
+ +S L D F+
Sbjct: 165 AGA----SSRSLAAACDEFV 180
>gi|299532727|ref|ZP_07046115.1| hypothetical protein CTS44_18078 [Comamonas testosteroni S44]
gi|298719362|gb|EFI60331.1| hypothetical protein CTS44_18078 [Comamonas testosteroni S44]
Length = 293
Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 35/169 (20%), Positives = 56/169 (33%), Gaps = 29/169 (17%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
+ +IAL ID N A ID ++L + ++ Y + LH
Sbjct: 6 QPRIALLIDADN------APAEMID--EILTELSTFGLINIRRAY------GNWTKAGLH 51
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122
L + V + ++F + G+ D+ + VDA E +E + I S D
Sbjct: 52 GWQSKL--LEYAV--RPMQQFDYSKGKNAT----DMAMTVDAMELLYTEKPDAFGIVSSD 103
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
FT LV L+ K + F+ LK
Sbjct: 104 ADFTPLVMHLRAKGA--AVYGFGAEQ---TPRAFVNACSRFLYFDALKE 147
>gi|146279485|ref|YP_001169643.1| hypothetical protein Rsph17025_3462 [Rhodobacter sphaeroides ATCC
17025]
gi|145557726|gb|ABP72338.1| hypothetical protein Rsph17025_3462 [Rhodobacter sphaeroides ATCC
17025]
Length = 225
Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 34/159 (21%), Positives = 53/159 (33%), Gaps = 37/159 (23%)
Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
+A+ IDG NL S K +R + + A ++ +
Sbjct: 4 VAVLIDGDNL--SGKH--------------AARIVEVAA---ALGRPTVQRVYVDAQRPC 44
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCF 125
DW GF+++ K++ D+ LA+DA E + + VI S D F
Sbjct: 45 DWHAARGFRLM-----------HAGTGKNASDLLLALDAVELALRGDADQFVIASSDRDF 93
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
T L L+ VT V R F+
Sbjct: 94 THLALRLREYGASVTGVGEAK-----TPQSFRAACADFI 127
>gi|127511410|ref|YP_001092607.1| hypothetical protein Shew_0476 [Shewanella loihica PV-4]
gi|126636705|gb|ABO22348.1| protein of unknown function DUF88 [Shewanella loihica PV-4]
Length = 265
Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 32/163 (19%), Positives = 54/163 (33%), Gaps = 29/163 (17%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
KIA+FID N A D +L +V Y + L
Sbjct: 6 KIAVFIDADN------APARKFD--VILAELAKHGVVSIRKAY------GNWKSPGLKHW 51
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124
D L + + ++F G+ D+ L +DA + ++ ++ + + S D
Sbjct: 52 EDIL----HEYAIQPIQQFDLTKGKNAT----DIALVIDAMDILYTKDIDIMCLISSDCD 103
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
FT LV + KKV + + F+ L
Sbjct: 104 FTPLVTRVLSDGKKVFGFGERKAPTAFV-----NSCSRFLYLD 141
>gi|325958516|ref|YP_004289982.1| hypothetical protein Metbo_0759 [Methanobacterium sp. AL-21]
gi|325329948|gb|ADZ09010.1| protein of unknown function DUF88 [Methanobacterium sp. AL-21]
Length = 163
Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 58/166 (34%), Gaps = 38/166 (22%)
Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIR---AYYYTTVVGDPEQQFSPLH 64
+ L +DG N+ L K F ++R A Y VG
Sbjct: 26 VGLLVDGPNM---------------LRKEFSLNLDIVRDIIAEYGNMRVGKVLLNQYASD 70
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGD 122
L++ + G+ + V DV +AV+A E ++ + + + D
Sbjct: 71 KLIEAIVNQGYTPIV--------------VAGDTDVYMAVEAMELIYNPNIDIIALMTRD 116
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
F ++ + K+ ++ ++P ++ L+ AD + L
Sbjct: 117 ADFLPIINKAKENGKETLVIG---AEPGFSA-ALQNSADSAIVLKS 158
>gi|99080500|ref|YP_612654.1| hypothetical protein TM1040_0659 [Ruegeria sp. TM1040]
gi|99036780|gb|ABF63392.1| protein of unknown function DUF88 [Ruegeria sp. TM1040]
Length = 262
Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 38/98 (38%), Gaps = 11/98 (11%)
Query: 81 VAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKK 138
++F G+ D+ L +DA + S + V+ S D FT L + ++ +
Sbjct: 66 PHQQFANTTGKNAS----DIALVIDAMDILHSGRFDGFVLISSDSDFTRLASRIREQGLD 121
Query: 139 VTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
V + + + R F+ + L E+ +D
Sbjct: 122 VYGMGMRKTPAAFV-----RACKRFIYVENLLTEVPKD 154
>gi|186681791|ref|YP_001864987.1| hypothetical protein Npun_R1332 [Nostoc punctiforme PCC 73102]
gi|186464243|gb|ACC80044.1| protein of unknown function DUF88 [Nostoc punctiforme PCC 73102]
Length = 283
Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 60/177 (33%), Gaps = 25/177 (14%)
Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
+ +F D N+ + K G LL+ +S+ + Y +
Sbjct: 37 VGIFADIQNV-SLIKGKGHF-----LLEFAQSKGRIDCKNVYY------NSHYINQVCTK 84
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTT 127
+ L G + V + + N R+ + V A + L +++ SGD +
Sbjct: 85 NELEILGIKCV--DVPDHSNNSADYRLMAD-----CVKAVAFNPSLTTIILLSGDWDYAG 137
Query: 128 LVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA--DYFMDLAYLKNEIARDPDEDKK 182
L+ L+ KKV I + S +L + D F + L +A +
Sbjct: 138 LICILKSLGKKVKI----FAQRGSESPKLIKLVGNDNFHFVDELPQLVANTNKTQPQ 190
>gi|108797873|ref|YP_638070.1| hypothetical protein Mmcs_0898 [Mycobacterium sp. MCS]
gi|119866967|ref|YP_936919.1| hypothetical protein Mkms_0915 [Mycobacterium sp. KMS]
gi|108768292|gb|ABG07014.1| protein of unknown function DUF88 [Mycobacterium sp. MCS]
gi|119693056|gb|ABL90129.1| protein of unknown function DUF88 [Mycobacterium sp. KMS]
Length = 311
Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 46/140 (32%), Gaps = 20/140 (14%)
Query: 28 IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTE 87
+D ++ S ++ Y D + Q+VA+
Sbjct: 58 VDIGAVIDFASSFGTLVLTRAYADWSSDVNANYRG-------------QLVARAVDLVQL 104
Query: 88 NCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVST 144
K+ D+ LAVDA E L H+VI GD + L +R + V +
Sbjct: 105 FPAAAYGKNGADIRLAVDAVEDMFRLPDLTHVVIVGGDSDYIALAQRCKRLGRYVVGIGV 164
Query: 145 VLSDPSMASDQLRRQADYFM 164
+ +S L D F+
Sbjct: 165 AGA----SSRSLAAACDEFV 180
>gi|289610064|emb|CBI60331.1| unnamed protein product [Sordaria macrospora]
Length = 257
Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 31/180 (17%), Positives = 58/180 (32%), Gaps = 31/180 (17%)
Query: 10 LFIDGANLYAS------SKALGFDIDYRKLLKAFR-----SRAIVIRAYYYTTVVGD--- 55
+F+D N++ + A+ F D L + A Y G+
Sbjct: 7 IFVDFDNVFTALWGIDEGLAIRFASDPADWLTRLGTLDTDEPRRWLVARCYMNPRGNVSA 66
Query: 56 --PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
GF+V+ + K++ D+ + +D +
Sbjct: 67 PGERNDRLWFSNFRTNFVRAGFEVIDCPPLTWG-------AKNAADIRMVIDVLDLLGHR 119
Query: 113 --LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
V SGD FT L+ L+ + ++ TI+S P + A+ + L L+
Sbjct: 120 TRFGEFVFLSGDSDFTPLLHRLRAEDRRTTILS-----PGHLAAAYTSVAERVLGLDTLE 174
>gi|264680306|ref|YP_003280216.1| hypothetical protein CtCNB1_4174 [Comamonas testosteroni CNB-2]
gi|262210822|gb|ACY34920.1| hypothetical conserved protein [Comamonas testosteroni CNB-2]
Length = 293
Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 35/169 (20%), Positives = 56/169 (33%), Gaps = 29/169 (17%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
+ +IAL ID N A ID ++L + ++ Y + LH
Sbjct: 6 QPRIALLIDADN------APAEMID--EILTELSTFGLINIRRAY------GNWTKAGLH 51
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122
L + V + ++F + G+ D+ + VDA E +E + I S D
Sbjct: 52 GWQSKL--LEYAV--RPMQQFDYSKGKNAT----DMAMTVDAMELLYTEKPDAFGIVSSD 103
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
FT LV L+ K + F+ LK
Sbjct: 104 ADFTPLVMHLRAKGA--AVYGFGAEQ---TPRAFVNACSRFLYFDALKE 147
>gi|146283893|ref|YP_001174046.1| hypothetical protein PST_3576 [Pseudomonas stutzeri A1501]
gi|145572098|gb|ABP81204.1| uncharacterized conserved protein [Pseudomonas stutzeri A1501]
Length = 243
Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 39/108 (36%), Gaps = 7/108 (6%)
Query: 76 QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQ 133
+V+ + + + K++ D L +DA + + + + S D FT L A ++
Sbjct: 26 KVLLDHSIQPIQQFAYTSGKNATDSSLIIDAMDLLYTRRFDGFCLVSSDSDFTRLAARIR 85
Query: 134 RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
+ V + S D F+ L+ + A+ E
Sbjct: 86 EEGLTVYGFGEQKTPSPFVS-----ACDKFIYTEILRADAAKASVEPP 128
>gi|296134764|ref|YP_003642006.1| protein of unknown function DUF88 [Thiomonas intermedia K12]
gi|295794886|gb|ADG29676.1| protein of unknown function DUF88 [Thiomonas intermedia K12]
Length = 259
Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 32/166 (19%), Positives = 53/166 (31%), Gaps = 29/166 (17%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
+IAL ID N + ID ++L I+ Y + P
Sbjct: 6 RIALLIDADN------SPADMID--EVLDELAKEGIINIRRAY----------GNWKSPH 47
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124
L+ + ++F G+ D + +DA + ++ L+ I S D
Sbjct: 48 LNAWAALLHDFAIQPIQQFDYTKGKNAT----DAAMIIDAMDLLYTKQLDGFGIVSSDSD 103
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
FT LV L+ KV + F+ L L+
Sbjct: 104 FTPLVMRLRANGLKVYGFGEQKTPKPFV-----NACSKFLYLENLR 144
>gi|21226782|ref|NP_632704.1| hypothetical protein MM_0680 [Methanosarcina mazei Go1]
gi|20905077|gb|AAM30376.1| conserved protein [Methanosarcina mazei Go1]
Length = 197
Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 55/162 (33%), Gaps = 32/162 (19%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
R KI L +DG N+ FD++ ++ + + +
Sbjct: 23 RRKIGLLVDGPNI----LRKEFDVNLEEIRDVLKDYGNIKIGRVFLNQYASD-------- 70
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGD 122
L++ + +G + + S +DV LAV+ E ++ L I + D
Sbjct: 71 KLVEAIENHGLEPII--------------CSSDVDVRLAVEGMELVYNPNIDTLAIVTRD 116
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F L+ K+ + + S L+ ADY +
Sbjct: 117 ADFKPLLNKANEHGKE----TIIFGVEPGFSTALKNSADYVI 154
>gi|146340536|ref|YP_001205584.1| hypothetical protein BRADO3579 [Bradyrhizobium sp. ORS278]
gi|146193342|emb|CAL77358.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
Length = 263
Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 30/76 (39%), Gaps = 7/76 (9%)
Query: 99 DVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
D+ L +DA + S + + S D FT L A ++ + V + +
Sbjct: 79 DITLVIDAMDLLHSGRFDGFCLVSSDSDFTRLAARIREQGIDV----FGFGEQK-TPESF 133
Query: 157 RRQADYFMDLAYLKNE 172
R+ F+ L+++
Sbjct: 134 RQACRRFIYTENLRSD 149
>gi|119887743|gb|ABM05923.1| NicB [Pseudomonas putida]
Length = 312
Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 34/206 (16%), Positives = 62/206 (30%), Gaps = 57/206 (27%)
Query: 7 KIALFIDGANLYASSKA---LGF----------------------DIDYRKLLK-----A 36
+ ++IDG N Y + I +LL+
Sbjct: 11 RTRIYIDGYNFYYGCLRGTPYKWLDLLPLFEKHILPSILVTDNHGQIRAWRLLESPSIKY 70
Query: 37 FRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYN------GFQVVAKVAKEFTEN-- 88
F ++ I A GD + H L LH G+ V K+ + +
Sbjct: 71 FTAKIIESVARA-----GDSVSSQARYHTALRKLHDGRIELIEGYYAVNKMKVKIVDPEN 125
Query: 89 -----------CGRKRVKSSMDVELAVDAF--EQSEGLEHLVIFSGDGCFTTLVAALQRK 135
K + DV LA+ A+ + ++H VI + D + ++
Sbjct: 126 PDKAPRECREIQAWKVEEKQSDVNLALQAYHDSITGQVDHAVIVTNDTDIAPALQMIRAH 185
Query: 136 -VKKVTIVSTVLSDPSMASDQLRRQA 160
++ +V A+ L + A
Sbjct: 186 TDVRIGVVVPTSGQNRSANTDLIKFA 211
>gi|89052539|ref|YP_507990.1| hypothetical protein Jann_0048 [Jannaschia sp. CCS1]
gi|88862088|gb|ABD52965.1| protein of unknown function DUF88 [Jannaschia sp. CCS1]
Length = 239
Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 28/73 (38%), Gaps = 7/73 (9%)
Query: 99 DVELAVDAF--EQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
D+ L +DA S + V+ S D FT L + ++ + V + +
Sbjct: 77 DIALVIDAMDVLHSGRFDGFVLVSSDSDFTRLASRIREQGLDVYGIGQQK-----TPEAF 131
Query: 157 RRQADYFMDLAYL 169
R+ F+ + +
Sbjct: 132 RKACKRFIFIENI 144
>gi|266625430|ref|ZP_06118365.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479]
gi|288862663|gb|EFC94961.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479]
Length = 306
Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 31/172 (18%), Positives = 59/172 (34%), Gaps = 29/172 (16%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
+K A+ ID N+ S+K + + +L ++ Y + S
Sbjct: 1 MNDKKFAVLIDSDNI--SAKYISY------ILDEMTKYGVITYKRIY------GDWTSSQ 46
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
+ L N ++F+ G+ D L +DA + ++ ++ I S
Sbjct: 47 MGKWKQELLENSIT----PIQQFSNTVGKNAT----DSALIIDAMDLLYTDNVDGFCIVS 98
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
D FT L + L+ K+V + R F +L L ++
Sbjct: 99 SDSDFTKLASRLRESGKEV-----IGMGEEKTPKSFRAACTVFTNLEILLDQ 145
>gi|116754600|ref|YP_843718.1| hypothetical protein Mthe_1300 [Methanosaeta thermophila PT]
gi|116666051|gb|ABK15078.1| protein of unknown function DUF88 [Methanosaeta thermophila PT]
Length = 162
Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 27/168 (16%), Positives = 55/168 (32%), Gaps = 36/168 (21%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIV----IRAYYYTTVVGDPEQQF 60
R+KI L +DG N+ F +D ++ R + + Y +
Sbjct: 20 RKKIGLLVDGPNM----LRKEFQMDLEEIRNILRDYGDIKVGKVFLNQYAS--------- 66
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L++ + GF+ ++ R V+ VD + ++ + + +
Sbjct: 67 ---EKLVEAVENQGFE----PVICTSDVDVRMAVEG-------VDMI-YNPVIDTIALVT 111
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
D ++ K+ + + S LR ADY + L
Sbjct: 112 RDADLKPVLMKAMEHGKE----TIIFGAEPGFSVALRNSADYVIVLRN 155
>gi|148255393|ref|YP_001239978.1| hypothetical protein BBta_4005 [Bradyrhizobium sp. BTAi1]
gi|146407566|gb|ABQ36072.1| hypothetical protein BBta_4005 [Bradyrhizobium sp. BTAi1]
Length = 263
Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 30/76 (39%), Gaps = 7/76 (9%)
Query: 99 DVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
D+ L +DA + S + + S D FT L A ++ + V + +
Sbjct: 79 DITLVIDAMDLLHSGRFDGFCLVSSDSDFTRLAARIREQGIDV----FGFGEQK-TPESF 133
Query: 157 RRQADYFMDLAYLKNE 172
R+ F+ L+++
Sbjct: 134 RQACRRFIYTENLRSD 149
>gi|326319000|ref|YP_004236672.1| hypothetical protein Acav_4221 [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323375836|gb|ADX48105.1| Domain of unknown function DUF88 [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 298
Score = 45.9 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 32/164 (19%), Positives = 52/164 (31%), Gaps = 31/164 (18%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
+IAL ID N A ID ++L + ++ Y S L
Sbjct: 14 RIALLIDADN------APAEMID--EILTELSTLGVISIRRAY------GNWTKSALSGW 59
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSM-DVELAVDAFEQ--SEGLEHLVIFSGDG 123
L + + ++F + + D+ + VDA E ++ + I S D
Sbjct: 60 QSKLL----EFAVRPIQQF-----DYSKRKNATDMAMTVDAMELLYTDRPDAFGIVSSDA 110
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
FT LV L+ K V + F+ L
Sbjct: 111 DFTPLVMHLRAKGAAVYGFGAQQTPRPFV-----NACSRFLYLE 149
>gi|46127481|ref|XP_388294.1| hypothetical protein FG08118.1 [Gibberella zeae PH-1]
Length = 206
Score = 45.9 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 49/158 (31%), Gaps = 40/158 (25%)
Query: 8 IALFIDGANLYASSKALG--------FDIDYRKLLKAFRSRAIVI--------RAYYYTT 51
+ ++ID +N+ +A+ ++ D L + + +Y
Sbjct: 14 VCIYIDDSNVAIRGRAMHDPQGTLTPWNYDIDVLANIIIQQFDLTAIEPFVQKSLNFYGA 73
Query: 52 VVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTE--NCGRKRVKSSMDVELAVDAFEQ 109
+ Q LD L G + G K DV LA D EQ
Sbjct: 74 DLHRSPQ--------LDHLRGLG-------LVYGCDCPRNGHGHEK-QADVALATDMTEQ 117
Query: 110 SEG-LE-----HLVIFSGDGCFTTLVAALQRKVKKVTI 141
++ L+ V+ SGD F V + V +
Sbjct: 118 AKHALDFGIARDFVLVSGDSDFIPAVRKVLGYGFNVHV 155
>gi|153011951|ref|YP_001373163.1| hypothetical protein Oant_4745 [Ochrobactrum anthropi ATCC 49188]
gi|151563839|gb|ABS17334.1| protein of unknown function DUF88 [Ochrobactrum anthropi ATCC
49188]
Length = 246
Score = 45.9 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 28/172 (16%), Positives = 55/172 (31%), Gaps = 30/172 (17%)
Query: 1 MFDPR-EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
M +PR ++A+ ID N AS+K ++ +
Sbjct: 1 MAEPRSPRLAVLIDADN--ASAK--------------------IVDGLFEEIAKIGEASV 38
Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLV 117
+ V+A+ A + K++ D+ L +DA + S +
Sbjct: 39 RRIYGDFANPRSKAWIDVLARHAIIPQQQFAYTAGKNASDITLVIDAMDLLHSGRFDGFC 98
Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
+ S D FT L + ++ + V + + R+ F+ L
Sbjct: 99 LVSSDSDFTRLASRIREQGIDV----FGFGEQK-TPESFRQACRRFIYTENL 145
>gi|190576877|ref|YP_001966209.1| hypothetical protein pK245.entp41 [Klebsiella pneumoniae]
gi|110264461|gb|ABG56824.1| hypothetical protein [Klebsiella pneumoniae]
Length = 228
Score = 45.9 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 37/224 (16%), Positives = 72/224 (32%), Gaps = 54/224 (24%)
Query: 7 KIALFIDGANLYA---SSKALGFDIDYRKLLKAFRS----RAIVIRAYYYTTVVGDP--- 56
+ A FIDG NL+ + + +D LL + + Y+T+ V P
Sbjct: 2 RTAFFIDGYNLFYGLLAGTPFKW-LDLPALLTYITKIQNPASETAQVNYFTSPVLPPLAT 60
Query: 57 --EQQFSPLHPLLDWLHYNGFQVVAKVAK-------EFTEN-CGRKRVKSSM-------- 98
++ + L G V + + + + K +
Sbjct: 61 RGKESAEAQDVYIRALKAKGVTVHLGRHRLNRGSAPRYLDGIPASRSDKVDVWDLEEKET 120
Query: 99 DVELAVDAFEQSE---------GLEHLVIFSGDGCFTTLVAALQRKVKKVTI-------V 142
DV +A+ + + +V+ S D T + A++ ++T+
Sbjct: 121 DVNIAISMYRLLSKQQNLEADARIAQIVLVSADTDMTPALKAIKEDFPEITVGIILPHRE 180
Query: 143 STVLSDPSMA---SDQLRRQADYFMDLAYLKNEI--ARDPDEDK 181
P SD +RRQ + + L++ R P + K
Sbjct: 181 GIERGVPGSLKNHSDWIRRQ----VKIDELQSHQFPERVPTKKK 220
>gi|332703643|ref|ZP_08423731.1| protein of unknown function DUF88 [Desulfovibrio africanus str.
Walvis Bay]
gi|332553792|gb|EGJ50836.1| protein of unknown function DUF88 [Desulfovibrio africanus str.
Walvis Bay]
Length = 251
Score = 45.9 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 37/176 (21%), Positives = 57/176 (32%), Gaps = 29/176 (16%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
M +++A+ ID N AS+ ID LLK Y +
Sbjct: 1 MVANADRLAVLIDADNATASA------ID--GLLKEVSKYGTPTVKRAY------GDWTT 46
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118
S L D LH K A + + + K+S D L +DA + S I
Sbjct: 47 SQLKSWKDVLH--------KYAIQPEQQFSYTKGKNSTDSALIIDAMDLLYSRNFTGFCI 98
Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
S D +T L +++ V + + D F+ L K +
Sbjct: 99 VSSDSDYTRLATRIRQDGVFVYGFGERKTPEPFVA-----ACDKFVFLEIFKESVE 149
>gi|289450778|ref|YP_003475518.1| hypothetical protein HMPREF0868_1242 [Clostridiales genomosp. BVAB3
str. UPII9-5]
gi|289185325|gb|ADC91750.1| conserved hypothetical protein [Clostridiales genomosp. BVAB3 str.
UPII9-5]
Length = 257
Score = 45.9 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 32/85 (37%), Gaps = 7/85 (8%)
Query: 87 ENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVST 144
+ G K+S D L +DA + +E ++ + S D FT L L+ K V
Sbjct: 66 QQFGYTSGKNSTDSALIIDAMDILYAEKVDGFCLVSSDSDFTRLATRLREAGKVVYGFGE 125
Query: 145 VLSDPSMASDQLRRQADYFMDLAYL 169
+ + D F+ L +
Sbjct: 126 QKTPNPFIA-----ACDRFVFLEII 145
>gi|190576025|ref|YP_001973870.1| hypothetical protein Smlt4196 [Stenotrophomonas maltophilia K279a]
gi|190013947|emb|CAQ47587.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a]
Length = 259
Score = 45.9 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 35/183 (19%), Positives = 58/183 (31%), Gaps = 29/183 (15%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
M +P ++IAL ID N A ID ++L + Y
Sbjct: 1 MSEPEKRIALLIDADN------APASKID--EVLAEVARYGVANVRRAY----------G 42
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118
+ P L + + ++F + G+ + + +DA + + L+ I
Sbjct: 43 NWKSPRLKGWEAVLHEYAIRPIQQFAYSKGKNASA----MAMVIDAMDLLYARNLDGFAI 98
Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
S D FT +V L KV + F L L A PD
Sbjct: 99 VSSDADFTPMVMRLLTDGVKVYGFGEKKTPEPFV-----NACSKFTYLEALGQTHASVPD 153
Query: 179 EDK 181
++
Sbjct: 154 TEQ 156
>gi|322704309|gb|EFY95906.1| hypothetical protein MAA_08714 [Metarhizium anisopliae ARSEF 23]
Length = 251
Score = 45.9 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 31/81 (38%), Gaps = 7/81 (8%)
Query: 95 KSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMA 152
K+S D + +DA + S + + S D FT L + ++ V + ++
Sbjct: 74 KNSTDAAMVIDAMDLLYSNRFDGFCLVSSDSDFTRLASRIRESGLLVYGFGERKAPKALV 133
Query: 153 SDQLRRQADYFMDLAYLKNEI 173
S D F+ + L +
Sbjct: 134 S-----ACDKFIYIENLSQNV 149
>gi|290957576|ref|YP_003488758.1| hypothetical protein SCAB_30991 [Streptomyces scabiei 87.22]
gi|260647102|emb|CBG70201.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length = 301
Score = 45.5 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 34/186 (18%), Positives = 62/186 (33%), Gaps = 31/186 (16%)
Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53
A+F+D LYA+ L FD+D L+ A +A ++R Y+Y
Sbjct: 37 AIFVDAGYLYAAVGRLAAGTEDRRSFDLDAEGLIDALIDKARTIFADSRLLRVYWY---D 93
Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
G + + + L K N + +D + D +
Sbjct: 94 GARRRIHTAEQQSIAELP---------DVKVRLGNLNANNQQKGVDSLIRTDLESLARHR 144
Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169
+ + GD + V A Q +V + + ++ L + D DL +
Sbjct: 145 AISDAALIGGDEDLVSAVEAAQGYGARVHLWGIEAPEGRNQAEPLLWEVDSQRTFDLDFF 204
Query: 170 KNEIAR 175
K ++R
Sbjct: 205 KPYVSR 210
>gi|225023600|ref|ZP_03712792.1| hypothetical protein EIKCOROL_00460 [Eikenella corrodens ATCC
23834]
gi|224943482|gb|EEG24691.1| hypothetical protein EIKCOROL_00460 [Eikenella corrodens ATCC
23834]
Length = 392
Score = 45.5 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 38/179 (21%), Positives = 60/179 (33%), Gaps = 30/179 (16%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
D + ++A+ ID N + A DI +LL+ I Y GD S
Sbjct: 5 DQQARLAVLIDADN----APA---DI-IDRLLEEIAKYGIASVKRIY----GDWSHGLSK 52
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
L ++ ++F G+ D+ L +DA + S + I S
Sbjct: 53 WKAAL-----LPHAII--PVQQFAYTKGKNAT----DMALVIDAMDLLYSGNFDGFCIVS 101
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
D FT L + L+ +T+ A R+ D F+ E R E
Sbjct: 102 SDSDFTRLASRLRESG--LTVYGFGEKKTPTA---FRKACDKFIYTEIFLPEKQRAHKE 155
>gi|294628827|ref|ZP_06707387.1| conserved hypothetical protein [Streptomyces sp. e14]
gi|292832160|gb|EFF90509.1| conserved hypothetical protein [Streptomyces sp. e14]
Length = 408
Score = 45.5 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 59/147 (40%), Gaps = 18/147 (12%)
Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78
+D+ L++ R +A ++R Y++ G P++ P H L + +V
Sbjct: 29 RITVDHSALVQQLREQAESDTERPLLRIYWF---DGAPDRVPQPEHRRLRVMP----RVT 81
Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136
++ T + GR K +D + + E + +V+ +GDG + A +
Sbjct: 82 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDVVLVTGDGDLLPGMMAAKEHG 139
Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162
V + + +D S+ L +AD
Sbjct: 140 VAVHLWAVQAADGDYNQSEDLVAEADE 166
>gi|289552459|ref|ZP_06441669.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605]
gi|289437091|gb|EFD19584.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605]
Length = 209
Score = 45.5 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 44/121 (36%), Gaps = 26/121 (21%)
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG-----LEHLVI 118
P +D L GF V AK K D ++ D + L LV+
Sbjct: 78 RPWVDALRNVGFAVFAKP-------------KVDEDSDVDRDMLAHIDERYREGLAALVV 124
Query: 119 FSGDGC-FTTLVAALQRKVKKVTIVSTVLSDP-SMASDQLRRQADYFMDLAYLKNEIARD 176
S DG F + A+ R V ++ ++ASD L F+DL + R+
Sbjct: 125 ASADGQAFRQPLEAVARSGTPVQVLGFREHASWALASDTL-----EFVDLEDIAGVF-RE 178
Query: 177 P 177
P
Sbjct: 179 P 179
>gi|27378275|ref|NP_769804.1| hypothetical protein blr3164 [Bradyrhizobium japonicum USDA 110]
gi|27351422|dbj|BAC48429.1| blr3164 [Bradyrhizobium japonicum USDA 110]
Length = 265
Score = 45.5 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 36/95 (37%), Gaps = 7/95 (7%)
Query: 77 VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQR 134
+++K A + K++ D+ L +DA + S + + S D FT L A ++
Sbjct: 57 ILSKHAIIPQQQFAYTTGKNASDITLVIDAMDLLHSGRFDGFCLVSSDSDFTRLAARIRE 116
Query: 135 KVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
+ V + + R+ F+ L
Sbjct: 117 QGVDV----FGFGEQK-TPESFRQACRRFVYTENL 146
>gi|326330720|ref|ZP_08197024.1| hypothetical protein NBCG_02155 [Nocardioidaceae bacterium Broad-1]
gi|325951561|gb|EGD43597.1| hypothetical protein NBCG_02155 [Nocardioidaceae bacterium Broad-1]
Length = 252
Score = 45.5 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 47/135 (34%), Gaps = 24/135 (17%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
+IAL ID N A+ ID +L V Y L
Sbjct: 6 RIALLIDADNAPAA------KID--AILNDLAEYGEVTIRRAYGNWTKPE------LKGW 51
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGL--EHLVIFSGDGC 124
++ L + ++F K++ D+ LA+DA E + + S D
Sbjct: 52 IEEL----HDAAIRPMQQFD----LTAHKNASDMALAIDAVELLHAAIPDAFALVSSDSD 103
Query: 125 FTTLVAALQRKVKKV 139
FT LV L+ K + V
Sbjct: 104 FTPLVHYLREKGRAV 118
>gi|118463148|ref|YP_883698.1| hypothetical protein MAV_4568 [Mycobacterium avium 104]
gi|118164435|gb|ABK65332.1| conserved hypothetical protein [Mycobacterium avium 104]
Length = 284
Score = 45.5 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 31/165 (18%), Positives = 53/165 (32%), Gaps = 22/165 (13%)
Query: 19 ASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78
+ + +D +L S ++ Y + + Q+V
Sbjct: 35 FTERLEQATVDVGAILDFASSFGTLVLTRAYADWSAEINAGYRG-------------QLV 81
Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRK 135
A+ K+ D+ LAVDA E L H+VI +GD + L +R
Sbjct: 82 ARAVDLVQLFPAAAYGKNGADIRLAVDAVEDMFRLPDLTHVVIVAGDSDYIPLAQRCKRL 141
Query: 136 VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE--IARDPD 178
+ V + + +S L D F+ L + R P
Sbjct: 142 GRYVVGIGVAGA----SSRALAAACDEFVIYDALPGVTALDRTPA 182
>gi|330504910|ref|YP_004381779.1| hypothetical protein MDS_3996 [Pseudomonas mendocina NK-01]
gi|328919196|gb|AEB60027.1| hypothetical protein MDS_3996 [Pseudomonas mendocina NK-01]
Length = 274
Score = 45.5 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 17/99 (17%), Positives = 39/99 (39%), Gaps = 7/99 (7%)
Query: 76 QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQ 133
+V+ + + + + K++ D L +DA + + + + S D FT L A L+
Sbjct: 60 KVLLDHSIQPIQQFAYTKGKNATDSSLIIDAMDLLYTRRFDGFCLVSSDSDFTRLAARLR 119
Query: 134 RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
+ +V + + D F+ L+++
Sbjct: 120 EEGLEVIGFGEQKTPQPFV-----KACDTFIYTELLRDD 153
>gi|319948099|ref|ZP_08022264.1| hypothetical protein ES5_02124 [Dietzia cinnamea P4]
gi|319438233|gb|EFV93188.1| hypothetical protein ES5_02124 [Dietzia cinnamea P4]
Length = 177
Score = 45.5 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Query: 104 VDAFE---QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160
+D ++ + +V+ SGDG FT VA L KVT+V+ S + +L+ A
Sbjct: 105 LDVLNYENIADRFDEVVLVSGDGIFTETVATLGGHGVKVTVVAHRTSL----AKRLQMAA 160
Query: 161 DY 162
Sbjct: 161 SQ 162
>gi|291526127|emb|CBK91714.1| Protein of unknown function DUF88 [Eubacterium rectale DSM 17629]
Length = 189
Score = 45.5 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 67/164 (40%), Gaps = 27/164 (16%)
Query: 5 REKI--ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
R+K+ ALFIDG N+ +S KA K + ++ Y + + +S
Sbjct: 50 RKKVNAALFIDGENI-SSKKAEQIQ-------KIANKQGVLGTEKVYGLQKDECTKSWSD 101
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
LD ++ K+ +N ++K ++ E+ + ++ ++ + I + D
Sbjct: 102 KAKKLDIKD---IRLCGNPEKDKVDN----KIKKDVNQEI-----KNNKSVDVVCIATSD 149
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
+T V L+R+ KKV + + +LR F ++
Sbjct: 150 KGYTDTVKELRRQGKKVVGIGEKKAP-----KELRDACSEFFEI 188
>gi|193212130|ref|YP_001998083.1| hypothetical protein Cpar_0461 [Chlorobaculum parvum NCIB 8327]
gi|193085607|gb|ACF10883.1| protein of unknown function DUF88 [Chlorobaculum parvum NCIB 8327]
Length = 450
Score = 45.5 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 52/141 (36%), Gaps = 24/141 (17%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
M RE IA+ ID N + ID+ +L +V Y +
Sbjct: 1 MEHSRETIAMLIDADN------SPSDKIDF--ILSEMAKYGVVNIRRAY------GNWKS 46
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118
L D LH + + + ++F G+ D+ + +DA + S+ L+ I
Sbjct: 47 HSLKGWEDKLHD--YAI--RPIQQFDYTKGKNAT----DMAMTIDAMDLLYSKKLDAFCI 98
Query: 119 FSGDGCFTTLVAALQRKVKKV 139
S D FT LV + + V
Sbjct: 99 VSSDSDFTPLVMRILSEGLNV 119
>gi|73667756|ref|YP_303771.1| hypothetical protein Mbar_A0207 [Methanosarcina barkeri str.
Fusaro]
gi|72394918|gb|AAZ69191.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
Length = 194
Score = 45.5 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 55/162 (33%), Gaps = 32/162 (19%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
R KI L +DG N+ FD++ ++ + + +
Sbjct: 23 RRKIGLLVDGPNI----LRKEFDVNLEEIRDVLKDYGNIKIGRVFLNQYASD-------- 70
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGD 122
L++ + +G + + S +DV LAV+ E ++ L I + D
Sbjct: 71 KLVEAIENHGLEPII--------------CSSDVDVRLAVEGMELVYNPNIDTLAIVTRD 116
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
F L+ K+ + + S L+ ADY +
Sbjct: 117 ADFKPLLNKANEHGKE----TIIFGVEPGFSTALKNSADYVI 154
>gi|330508315|ref|YP_004384743.1| hypothetical protein MCON_2481 [Methanosaeta concilii GP-6]
gi|328929123|gb|AEB68925.1| conserved hypothetical protein TIGR00288 [Methanosaeta concilii
GP-6]
Length = 161
Score = 45.5 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 26/168 (15%), Positives = 55/168 (32%), Gaps = 36/168 (21%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIV----IRAYYYTTVVGDPEQQF 60
R++I L +DG N+ F +D ++ + + + Y +
Sbjct: 20 RKRIGLLVDGPNM----LRKEFQMDLEEIRDILKDYGDIKMGKVFLNQYAS--------- 66
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L++ + GF+ ++ R V+ VD + ++ L + +
Sbjct: 67 ---EKLVEAVENQGFE----PVICTSDVDVRMAVEG-------VDMI-YNPVIDTLALVT 111
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
D ++ K+ + + S LR ADY + L
Sbjct: 112 RDADLKPVLMKAMEHGKE----TIIFGAEPGFSVALRNSADYVIVLRD 155
>gi|118616825|ref|YP_905157.1| hypothetical protein MUL_1097 [Mycobacterium ulcerans Agy99]
gi|118568935|gb|ABL03686.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length = 245
Score = 45.5 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 41/120 (34%), Gaps = 24/120 (20%)
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG-----LEHLVI 118
P +D L GF V AK + + R D E + L LV+
Sbjct: 114 RPWVDALRNVGFAVFAKPKIDEDSDVDR-------------DMLEHIDQRYREGLAALVV 160
Query: 119 FSGDGC-FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
S DG F + + R V ++ AS L A F+DL + R+P
Sbjct: 161 ASADGQAFRQPLEKISRAGTPVQVLGF----REHASWALASDALEFVDLEDIAGVF-REP 215
>gi|313125619|ref|YP_004035889.1| hypothetical protein Hbor_08480 [Halogeometricum borinquense DSM
11551]
gi|312291984|gb|ADQ66444.1| uncharacterized conserved protein [Halogeometricum borinquense DSM
11551]
Length = 177
Score = 45.1 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 30/156 (19%), Positives = 49/156 (31%), Gaps = 31/156 (19%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
++ALF+DG N+ FD+D + +A Y L
Sbjct: 31 RVALFVDGPNV----LRDEFDVDLDDVREAAAEIGRPTATRLYL--------DEHATPGL 78
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124
+ GF+VV +DV LAVD + + + + + S D
Sbjct: 79 IQAAEARGFEVVI--------------TSGDVDVRLAVDITQFAVEGRADVIAVASRDTD 124
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160
F + + ++ SD LR A
Sbjct: 125 FKPAIETANAYGLRTFAIAPGEFGR---SDALRNAA 157
>gi|289580394|ref|YP_003478860.1| hypothetical protein Nmag_0713 [Natrialba magadii ATCC 43099]
gi|289529947|gb|ADD04298.1| protein of unknown function DUF88 [Natrialba magadii ATCC 43099]
Length = 154
Score = 45.1 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 5/73 (6%)
Query: 96 SSMDVELAVDA--FEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMAS 153
+DV+LAVDA + ++ L I S D F ++ + + ++ S
Sbjct: 83 GDVDVKLAVDATALSTDQTIDTLAIASRDTDFKPVLEHAAAQG--IETIAIAPGSHGR-S 139
Query: 154 DQLRRQADYFMDL 166
D L+ AD + L
Sbjct: 140 DALQNAADEAITL 152
>gi|154496234|ref|ZP_02034930.1| hypothetical protein BACCAP_00519 [Bacteroides capillosus ATCC
29799]
gi|150274317|gb|EDN01394.1| hypothetical protein BACCAP_00519 [Bacteroides capillosus ATCC
29799]
Length = 288
Score = 45.1 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 29/83 (34%), Gaps = 7/83 (8%)
Query: 99 DVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
D + +DA + S + V+ S D FT L L+ KV + +
Sbjct: 77 DSAMIIDAMDLLYSGRCDGFVLVSSDSDFTRLATRLREAGMKVYGMGEKKTPLPF----- 131
Query: 157 RRQADYFMDLAYLKNEIARDPDE 179
D F+ + ++ + E
Sbjct: 132 IVACDKFIYIEVIRAAGEKARQE 154
>gi|257094155|ref|YP_003167796.1| hypothetical protein CAP2UW1_2580 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257046679|gb|ACV35867.1| conserved hypothetical protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 311
Score = 45.1 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 25/164 (15%), Positives = 50/164 (30%), Gaps = 29/164 (17%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
+P +++A+ ID N + A+ LL+ A S
Sbjct: 53 EPTKRLAVLIDADN---AQPAV-----IEALLEEIARFGE---ATVRRIYGDFTSPTSSS 101
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
L+ + K ++F G+ D + +DA + + + + +
Sbjct: 102 WKKFLN-------KHSIKPIQQFAYTTGKNAT----DSTMIIDAMDLLYTRRFDGFCLVT 150
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
D FT L L+ + +V + R F+
Sbjct: 151 SDSDFTGLAVRLREEGLQVFGFGEQKTPEPF-----RNACHKFI 189
>gi|150008736|ref|YP_001303479.1| hypothetical protein BDI_2126 [Parabacteroides distasonis ATCC
8503]
gi|149937160|gb|ABR43857.1| conserved hypothetical protein [Parabacteroides distasonis ATCC
8503]
Length = 240
Score = 45.1 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 29/176 (16%), Positives = 60/176 (34%), Gaps = 29/176 (16%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
M +K+A+ ID N+ + + + +L+ I+ Y +
Sbjct: 1 MNSKEQKLAVLIDADNVPYA--------NIKGMLEEIAKYGILTIKRIYGDWTKPTVAGW 52
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118
+ LLD+ ++++ G+ D + +DA + ++ ++ I
Sbjct: 53 KSI--LLDY--------AITPIQQYSYTTGKNAT----DSAMIIDAMDILHTDKVDGFCI 98
Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
S D FT L L+ K V + + D F+ + L +I
Sbjct: 99 VSSDSDFTRLAVRLRESGKFVLGMGEKKTPNPFIV-----SCDKFVYIEILGGDIK 149
>gi|319788348|ref|YP_004147823.1| hypothetical protein Psesu_2765 [Pseudoxanthomonas suwonensis 11-1]
gi|317466860|gb|ADV28592.1| hypothetical protein Psesu_2765 [Pseudoxanthomonas suwonensis 11-1]
Length = 250
Score = 45.1 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 32/171 (18%), Positives = 52/171 (30%), Gaps = 29/171 (16%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
M +P ++IAL ID N A ID +L + A
Sbjct: 1 MAEPEKRIALLIDADN------APASKIDL--VLAEVARHGV---ANVRRAYGNWKSPNL 49
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118
+L + + ++F + G+ D+ + +DA + + L+ I
Sbjct: 50 KGWEAVL-------HEYAIRPIQQFAYSSGKNAS----DMAMVIDAMDLLYARNLDGFAI 98
Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
S D FT LV L KV + F + L
Sbjct: 99 VSSDADFTPLVMRLLTDGMKVYGFGEKKTPSPFV-----NACSKFTYVEAL 144
>gi|302865596|ref|YP_003834233.1| hypothetical protein Micau_1095 [Micromonospora aurantiaca ATCC
27029]
gi|315502144|ref|YP_004081031.1| hypothetical protein ML5_1342 [Micromonospora sp. L5]
gi|302568455|gb|ADL44657.1| hypothetical protein Micau_1095 [Micromonospora aurantiaca ATCC
27029]
gi|315408763|gb|ADU06880.1| hypothetical protein ML5_1342 [Micromonospora sp. L5]
Length = 485
Score = 45.1 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
Query: 69 WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG-LEHLVIFSGDGCFTT 127
+ ++G + + + + +K D+ L V A + V+ +GD F
Sbjct: 54 AVRFDG-SITTAMTEHLIDAEVVVSLKEQADIHLTVLAMDYLHQGCGQFVLVTGDQDFIP 112
Query: 128 LVAALQRKVKKVTIVS 143
L+ L R +VT+V
Sbjct: 113 LIRRLLRDGCRVTVVY 128
>gi|52425038|ref|YP_088175.1| hypothetical protein MS0983 [Mannheimia succiniciproducens MBEL55E]
gi|52307090|gb|AAU37590.1| unknown [Mannheimia succiniciproducens MBEL55E]
Length = 274
Score = 45.1 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 56/166 (33%), Gaps = 26/166 (15%)
Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
+A+ ID N AS++ + + +L+ Y VGD + + ++
Sbjct: 18 LAVLIDADN--ASAQTI------KAILEETTKFGEATVKRIYGNFVGDSGKWKAVINEY- 68
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTT 127
K ++F G+ M ++ A+D + + I S D FT
Sbjct: 69 ----------AIKPMQQFAYTKGKNATDGFMIID-AMDLL-YTNRFDGFCIVSSDSDFTA 116
Query: 128 LVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
L L+ + VT+ + F+ + L E+
Sbjct: 117 LAIRLKEQG--VTVYGFGKKQ---TPEAFLNACSQFIYVENLLPEL 157
>gi|20092653|ref|NP_618728.1| hypothetical protein MA3857 [Methanosarcina acetivorans C2A]
gi|19917935|gb|AAM07208.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
Length = 195
Score = 45.1 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 56/165 (33%), Gaps = 32/165 (19%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
R KI L +DG N+ FD++ ++ + + +
Sbjct: 25 RRKIGLLVDGPNI----LRKEFDVNLEEIRDVLKDYGNIKIGRVFLNQYASD-------- 72
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGD 122
L++ + +G + + S +DV LAV+ E ++ L I + D
Sbjct: 73 KLVEAIENHGLEPII--------------CSSDVDVRLAVEGMELVYNPNIDTLAIVTRD 118
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
F L+ K+ + + S L+ ADY + +
Sbjct: 119 ADFKPLLNKANEHGKE----TIIFGVEPGFSTALKNSADYVILMD 159
>gi|238924719|ref|YP_002938235.1| hypothetical protein EUBREC_2370 [Eubacterium rectale ATCC 33656]
gi|238876394|gb|ACR76101.1| Hypothetical protein EUBREC_2370 [Eubacterium rectale ATCC 33656]
Length = 191
Score = 45.1 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 67/164 (40%), Gaps = 27/164 (16%)
Query: 5 REKI--ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
R+K+ ALFIDG N+ +S KA K + ++ Y + + +S
Sbjct: 52 RKKVNAALFIDGENI-SSKKAEQIQ-------KIANKQGVLGTEKVYGLQKDECTKSWSD 103
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
LD ++ K+ +N ++K ++ E+ + ++ ++ + I + D
Sbjct: 104 KAKKLDIKD---IRLCGNPEKDKVDN----KIKKDVNQEI-----KNNKSVDVVCIATSD 151
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
+T V L+R+ KKV + + +LR F ++
Sbjct: 152 KGYTDTVKELRRQGKKVVGIGEKKAP-----KELRDACSEFFEI 190
>gi|120436105|ref|YP_861791.1| hypothetical protein GFO_1754 [Gramella forsetii KT0803]
gi|117578255|emb|CAL66724.1| protein containing DUF88 [Gramella forsetii KT0803]
Length = 245
Score = 45.1 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 38/97 (39%), Gaps = 7/97 (7%)
Query: 77 VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQR 134
V+ + A + G + K++ D + +DA + S ++ + S D FT L L+
Sbjct: 52 VLLENAIHPIQQYGYTQGKNATDSAMIIDAMDILYSNKVDGFCLVSSDSDFTRLATRLRE 111
Query: 135 KVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
KV + D D F+ + LKN
Sbjct: 112 ASMKVIGIGEKK-----TPDPFIVACDKFIYIEILKN 143
>gi|302337118|ref|YP_003802324.1| protein of unknown function DUF88 [Spirochaeta smaragdinae DSM
11293]
gi|301634303|gb|ADK79730.1| protein of unknown function DUF88 [Spirochaeta smaragdinae DSM
11293]
Length = 250
Score = 45.1 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 27/174 (15%), Positives = 56/174 (32%), Gaps = 29/174 (16%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
++K+A+ ID N + ++ ++ Y
Sbjct: 8 QSQQKLAVLIDADN---TQGSI--------------VEGLLAEVAKYGIASVKRIYGDWT 50
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
L W +V+ + + + G K++ D + +DA + +E + I S
Sbjct: 51 SPNLRSW-----KEVLLEHSIIPIQQFGYTSGKNATDSAMIIDAMDLLYTERFDGFCIVS 105
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
D FT L A ++ + V + + S D F+ L+ +
Sbjct: 106 SDSDFTRLAARIREEGLTVYGFGEKKTPRAFVS-----ACDKFIYTEILREDAE 154
>gi|238917756|ref|YP_002931273.1| hypothetical protein EUBELI_01837 [Eubacterium eligens ATCC 27750]
gi|238873116|gb|ACR72826.1| Hypothetical protein EUBELI_01837 [Eubacterium eligens ATCC 27750]
Length = 318
Score = 45.1 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 31/172 (18%), Positives = 56/172 (32%), Gaps = 29/172 (16%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
++ A+ ID N+ SSK + +L ++ Y +
Sbjct: 1 MDDKRYAVLIDSDNI--SSKYI------SNILDEMTKYGVITYKRIY------GDWTSPQ 46
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
L N ++F G+ D L +DA + ++ ++ I S
Sbjct: 47 AGKWKKELMENSIT----PIQQFRNTVGKNAT----DSTLIIDAMDILYTKNVDGFCIVS 98
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
DG FT L + L+ +V + R F DL L+++
Sbjct: 99 SDGDFTRLASRLRESGMEVIGMGENK-----TPRSFRAACSVFTDLELLQDQ 145
>gi|315925521|ref|ZP_07921731.1| protein of hypothetical function DUF88 [Pseudoramibacter
alactolyticus ATCC 23263]
gi|315621062|gb|EFV01033.1| protein of hypothetical function DUF88 [Pseudoramibacter
alactolyticus ATCC 23263]
Length = 320
Score = 45.1 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 36/102 (35%), Gaps = 11/102 (10%)
Query: 81 VAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKK 138
++F G+ D L +DA + ++ I S D FT L + L+
Sbjct: 61 PIQQFANVSGKNAT----DSALIIDAMDILYGGMVDGFCIVSSDSDFTRLASRLRESGMM 116
Query: 139 VTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
V + D R F+ L + + +D D+D
Sbjct: 117 VIGMGEDK-----TPDSFRNACTKFISLENILDSYEQDIDQD 153
>gi|87200042|ref|YP_497299.1| hypothetical protein Saro_2026 [Novosphingobium aromaticivorans DSM
12444]
gi|87135723|gb|ABD26465.1| hypothetical protein Saro_2026 [Novosphingobium aromaticivorans DSM
12444]
Length = 270
Score = 45.1 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 37/97 (38%), Gaps = 7/97 (7%)
Query: 77 VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQR 134
V+A+ A + +N K++ D+ L +DA + S + + S D FT L A ++
Sbjct: 57 VLARHAIKAQQNFAYTSGKNASDIALVIDAMDLLHSGRFDGFCLVSSDSDFTGLAARIRE 116
Query: 135 KVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
+ V + R+ F+ L
Sbjct: 117 QGLDVYGFGEKK-----TPESFRQACKRFIYTENLLE 148
>gi|145226198|ref|YP_001136848.1| hypothetical protein Mflv_5599 [Mycobacterium gilvum PYR-GCK]
gi|145218659|gb|ABP48060.1| hypothetical protein Mflv_5599 [Mycobacterium gilvum PYR-GCK]
Length = 243
Score = 45.1 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 42/210 (20%), Positives = 65/210 (30%), Gaps = 65/210 (30%)
Query: 7 KIALFIDGANLYASSKAL------GFD-IDYRKLLKAFRS------RAIVIRAYYYTTVV 53
++ ++IDG NLY + L G+ +D R L + A + R Y T V+
Sbjct: 2 RVGVYIDGFNLYYGGRGLCGKGTPGWRWLDVRALATRLVTAHSVWTGATIERVVYCTAVI 61
Query: 54 --GDPEQQFSPLHPLLDWLHY--------NGFQV--VAKVAKEFTENCGR---------- 91
D L L G V VA+ + GR
Sbjct: 62 SGADNPVGNREQDAYLRALQRSHTADRVELGNYVHRVARAPLATPDRNGRPLLAHPGGPL 121
Query: 92 --------------------KRVKSSMDVELA----VDAFEQSEGLEHLVIFSGDGCFTT 127
+R + DV +A +D EQ ++ V+ S D
Sbjct: 122 MIKDGTGQDDPAAVFMVSTARREEKGSDVNVAAHLLLDILEQ--RIDAAVMISNDSDLKF 179
Query: 128 LVAALQRKVKKVTIVSTVLSDPSMASDQLR 157
V + + V TV S + +LR
Sbjct: 180 PVQTARDR----VPVGTVNPSRSHTAGKLR 205
>gi|302692524|ref|XP_003035941.1| hypothetical protein SCHCODRAFT_105543 [Schizophyllum commune H4-8]
gi|300109637|gb|EFJ01039.1| hypothetical protein SCHCODRAFT_105543 [Schizophyllum commune H4-8]
Length = 598
Score = 45.1 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 23/67 (34%), Gaps = 6/67 (8%)
Query: 102 LAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRR 158
L D + +V+ SGD F + L+++ V +V P L
Sbjct: 131 LVADMLVFALREPAPSTVVLVSGDRDFAYTASILRQRGINVVLVCHARPGPH---RSLAA 187
Query: 159 QADYFMD 165
Q +D
Sbjct: 188 QVSECVD 194
>gi|295109365|emb|CBL23318.1| Uncharacterized conserved protein [Ruminococcus obeum A2-162]
Length = 255
Score = 45.1 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 27/164 (16%), Positives = 52/164 (31%), Gaps = 29/164 (17%)
Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
IA+ ID N + + +++ + ++ Y + L
Sbjct: 7 IAMLIDADN---TQLS-----KLESVIQEISTNGRIVVKRAY------GNWRKGSLKNWE 52
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCF 125
+ L ++ K ++F G+ D+ L +D + + VI + D +
Sbjct: 53 NELK----RLAIKAEQQFDYVAGKNAT----DMALVIDTLDLLHSGIYDAFVIVASDSDY 104
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
T L L+ V V + R D F+ L L
Sbjct: 105 TPLAIKLRESGVFVMGVGEKKTPEPF-----RNACDEFVYLENL 143
>gi|259419136|ref|ZP_05743053.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
gi|259345358|gb|EEW57212.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
Length = 258
Score = 45.1 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 37/95 (38%), Gaps = 11/95 (11%)
Query: 81 VAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKK 138
++F G+ D+ L +DA + S + V+ S D FT L + ++ +
Sbjct: 66 PHQQFANTTGKNAS----DIALVIDAMDILHSGRFDGFVLISSDSDFTRLASRIREQGLD 121
Query: 139 VTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
V + + + R F+ + L NE+
Sbjct: 122 VYGMGMRKTPAAFV-----RACKRFIYVENLLNEV 151
>gi|183980478|ref|YP_001848769.1| hypothetical protein MMAR_0447 [Mycobacterium marinum M]
gi|183173804|gb|ACC38914.1| conserved hypothetical protein [Mycobacterium marinum M]
Length = 245
Score = 44.7 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 43/121 (35%), Gaps = 26/121 (21%)
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG-----LEHLVI 118
P +D L GF V AK + + R D E + L LV+
Sbjct: 114 RPWVDALRNVGFAVFAKPKIDEDSDVDR-------------DMLEHIDQRYREGLAALVV 160
Query: 119 FSGDGC-FTTLVAALQRKVKKVTIVSTVLSDP-SMASDQLRRQADYFMDLAYLKNEIARD 176
S DG F + + R V ++ ++ASD L F+DL + R+
Sbjct: 161 ASADGQAFRQPLEKISRAGTPVQVLGFREHASWALASDTL-----EFVDLEDIAGVF-RE 214
Query: 177 P 177
P
Sbjct: 215 P 215
>gi|257486916|ref|ZP_05640957.1| hypothetical protein PsyrptA_26815 [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 229
Score = 44.7 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 28/166 (16%), Positives = 50/166 (30%), Gaps = 39/166 (23%)
Query: 7 KIALFIDGANLYA---SSKALGFDIDYRKLLKAFRS----RAIVIRAYYYTTVVGDPEQQ 59
+ A F+DG NL+ + + +D LL + ++T+ V
Sbjct: 2 RTACFVDGYNLFYGLLAGTKYKW-LDLPSLLAHILRVEHPENTLASVSFFTSGVKPSLAS 60
Query: 60 F-----SPLHPLLDWLHYNGFQV-----------------VAKVAKEFTENCGRKRVKSS 97
L L G V + A + K +
Sbjct: 61 RGILSKEAQDSYLRALIARGVSVNYGRHQLESGKAPRFVDKSTPASRLDQVDIWKLEEKE 120
Query: 98 MDVELAVDAFEQS---------EGLEHLVIFSGDGCFTTLVAALQR 134
DV +A+ + + + L+ LV+ S D T + AL+
Sbjct: 121 TDVHIAISMYRLAARQAGLMQEDRLQQLVLVSADTDMTPALRALRE 166
>gi|254464182|ref|ZP_05077593.1| protein containing DUF88 [Rhodobacterales bacterium Y4I]
gi|206685090|gb|EDZ45572.1| protein containing DUF88 [Rhodobacterales bacterium Y4I]
Length = 245
Score = 44.7 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 58/177 (32%), Gaps = 28/177 (15%)
Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
+A+ ID N+ S+K D S Y G Q ++ L
Sbjct: 10 LAVLIDADNI--SAKYAEAMFD------EIASFGEASIRRIYGDFAGGSPQGWNKEK--L 59
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCF 125
L Q +F G+ D+ L +DA + S + V+ S D F
Sbjct: 60 AALAIVPHQ-------QFANTTGKNAS----DIALVIDAMDILHSGRFDGFVLISSDSDF 108
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182
T L + ++ + V + + + + F+ + L + + + KK
Sbjct: 109 TRLASRIREQGLDVYGMGMRKTPAAFV-----KACKRFIYVENLLEDPGKSKPKAKK 160
>gi|183982600|ref|YP_001850891.1| hypothetical protein MMAR_2590 [Mycobacterium marinum M]
gi|183175926|gb|ACC41036.1| conserved hypothetical protein [Mycobacterium marinum M]
Length = 288
Score = 44.7 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 33/182 (18%), Positives = 58/182 (31%), Gaps = 41/182 (22%)
Query: 7 KIALFID-------------GANLYASSKALGFD--------IDYRKLLKAFRSRAIVIR 45
++A++ D G N + K+ G + +D ++ S ++
Sbjct: 8 RVAVYFDFDNIVISRYEQVHGRNTFHRDKSKGLEQERLQLATVDLGAIIDFASSFGTLVL 67
Query: 46 AYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVD 105
Y D + Q+V + K+ D+ LAVD
Sbjct: 68 TRAYADWSADVNAGYHG-------------QLVGRAVDLVQLFPAASYGKNGADIRLAVD 114
Query: 106 AFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162
A E L H+VI GD + L +R + V + + +S L D
Sbjct: 115 AVEDMFRLPDLTHVVIVGGDSDYIALAQRCKRLGRYVVGIGVAGA----SSGSLAAACDE 170
Query: 163 FM 164
F+
Sbjct: 171 FV 172
>gi|240168411|ref|ZP_04747070.1| hypothetical protein MkanA1_03812 [Mycobacterium kansasii ATCC
12478]
Length = 251
Score = 44.7 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 43/121 (35%), Gaps = 26/121 (21%)
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG-----LEHLVI 118
P +D L GF V AK + + R D E + L LV+
Sbjct: 120 RPWVDALRNVGFAVFAKPKIDEDSDVDR-------------DMLEHIDKRYREGLAALVV 166
Query: 119 FSGDGC-FTTLVAALQRKVKKVTIVSTVLSDP-SMASDQLRRQADYFMDLAYLKNEIARD 176
S DG F + + R V ++ ++ASD L F+DL + R+
Sbjct: 167 ASADGQAFRQPLEEISRGGIPVQVLGFREHASWALASDTL-----EFVDLEDIAGVF-RE 220
Query: 177 P 177
P
Sbjct: 221 P 221
>gi|167760471|ref|ZP_02432598.1| hypothetical protein CLOSCI_02845 [Clostridium scindens ATCC 35704]
gi|167661837|gb|EDS05967.1| hypothetical protein CLOSCI_02845 [Clostridium scindens ATCC 35704]
Length = 311
Score = 44.7 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 34/85 (40%), Gaps = 9/85 (10%)
Query: 99 DVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
D + +DA + + ++ I S D FT LV+ ++ K V + +
Sbjct: 75 DSAMIIDAMDILYTNDVDGFCIVSSDSDFTRLVSRIRESGKMVIGMGENKTPEPF----- 129
Query: 157 RRQADYFMDLAYLKNEIARDPDEDK 181
R+ D F L L N ++P K
Sbjct: 130 RKACDKFTILENLLN--EQEPGSPK 152
>gi|331700345|ref|YP_004336584.1| hypothetical protein Psed_6643 [Pseudonocardia dioxanivorans
CB1190]
gi|326955034|gb|AEA28731.1| hypothetical protein Psed_6643 [Pseudonocardia dioxanivorans
CB1190]
Length = 207
Score = 44.7 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 46/122 (37%), Gaps = 27/122 (22%)
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE-GLE-----HLV 117
P ++ L GF V AK K ++ + D + + H+V
Sbjct: 75 RPWVEALRNVGFAVFAKP-KTTEDSDVDE------------DMLRHIQLRADEGVLRHVV 121
Query: 118 IFSGDGC-FTTLVAALQRKVKKVTIVST-VLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
+ SGDG F + L K VT++ + ++ S+ L F+DL + R
Sbjct: 122 VASGDGRAFREPLEELVAKGAGVTVIGFREYATFALNSEVL-----EFVDLEDIDGVF-R 175
Query: 176 DP 177
+P
Sbjct: 176 EP 177
>gi|188993344|ref|YP_001905354.1| hypothetical protein xccb100_3949 [Xanthomonas campestris pv.
campestris str. B100]
gi|167735104|emb|CAP53316.1| Conserved hypothetical protein [Xanthomonas campestris pv.
campestris]
Length = 277
Score = 44.7 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 31/172 (18%), Positives = 51/172 (29%), Gaps = 29/172 (16%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
+P ++IAL ID N A ID ++ Y
Sbjct: 4 NPDKRIALLIDADN------APAGKID-----------VVLAEVARYGVANVRRAYGNWK 46
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
L W + + ++F + G+ D+ + +DA + + L+ I S
Sbjct: 47 SPHLKSWEAAL-HEYAIRPIQQFAYSSGKNAS----DMAMVIDAMDLLYARNLDGFAIVS 101
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
D FT LV L KV + F + L +
Sbjct: 102 SDADFTPLVMRLLTDGMKVYGFGEKKTLAPFV-----NACSKFTYVEALGEQ 148
>gi|224371902|ref|YP_002606068.1| hypothetical protein HRM2_48560 [Desulfobacterium autotrophicum
HRM2]
gi|223694621|gb|ACN17904.1| conserved hypothetical protein [Desulfobacterium autotrophicum
HRM2]
Length = 239
Score = 44.7 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 38/106 (35%), Gaps = 11/106 (10%)
Query: 80 KVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVK 137
K A + + K+S D L +DA + L+ + S D FT L ++
Sbjct: 59 KHAIQPIQQFSYTIGKNSTDSSLIIDAMDLLHEQRLDGFCLVSSDSDFTRLATRIRESGL 118
Query: 138 KVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE----IARDPDE 179
V + + S D F+ L+ + I R+ DE
Sbjct: 119 TVYGFGEKKTPEAFVS-----ACDKFVYTEILRPQNKDNIPRESDE 159
>gi|240103393|ref|YP_002959702.1| hypothetical protein TGAM_1336 [Thermococcus gammatolerans EJ3]
gi|239910947|gb|ACS33838.1| Conserved hypothetical protein [Thermococcus gammatolerans EJ3]
Length = 169
Score = 44.7 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 36/169 (21%), Positives = 67/169 (39%), Gaps = 32/169 (18%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
++IAL IDG N+ K LG + L++ + A Q++P
Sbjct: 30 KRIALLIDGPNMLR--KELGVKL--EDLVEVLSEIGDIRVAKVVL-------NQYAP-QG 77
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDG 123
L++ + GF+ + G VK LAV+A + + ++ + I + +
Sbjct: 78 LIEAVSNQGFEPMV--------VSGETGVK------LAVEAMKEIYNPHIDVIAIATRNA 123
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
F ++ + K K+ ++ S L+ ADY + L K+E
Sbjct: 124 EFLPVILKAKEKGKETIVIGVEPGF----SVALKHAADYAIVLGGEKDE 168
>gi|149912718|ref|ZP_01901252.1| hypothetical protein RAZWK3B_01980 [Roseobacter sp. AzwK-3b]
gi|149813124|gb|EDM72950.1| hypothetical protein RAZWK3B_01980 [Roseobacter sp. AzwK-3b]
Length = 204
Score = 44.7 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 29/82 (35%), Gaps = 5/82 (6%)
Query: 84 EFTENCGRKRVKS-SMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIV 142
E + K + + L +D + + +V+ +GD F +R+ +V +
Sbjct: 127 EEKDFMLDIEQKGVDLRIGLDIDRLSLRQMVRTIVVVTGDSDFIPAFKFARREGVRVILA 186
Query: 143 STVLSDPSMASDQLRRQADYFM 164
+L+ D F+
Sbjct: 187 HMDHGVK----RELKAHTDGFI 204
>gi|21233195|ref|NP_639112.1| hypothetical protein XCC3767 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66770137|ref|YP_244899.1| hypothetical protein XC_3839 [Xanthomonas campestris pv. campestris
str. 8004]
gi|21115046|gb|AAM43024.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66575469|gb|AAY50879.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. 8004]
Length = 277
Score = 44.7 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 31/172 (18%), Positives = 51/172 (29%), Gaps = 29/172 (16%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
+P ++IAL ID N A ID ++ Y
Sbjct: 4 NPDKRIALLIDADN------APAGKID-----------VVLAEVARYGVANVRRAYGNWK 46
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
L W + + ++F + G+ D+ + +DA + + L+ I S
Sbjct: 47 SPHLKSWEAAL-HEYAIRPIQQFAYSSGKNAS----DMAMVIDAMDLLYARNLDGFAIVS 101
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
D FT LV L KV + F + L +
Sbjct: 102 SDADFTPLVMRLLTDGMKVYGFGEKKTPAPFV-----NACSKFTYVEALGEQ 148
>gi|34495828|ref|NP_900043.1| hypothetical protein CV_0373 [Chromobacterium violaceum ATCC 12472]
gi|34101683|gb|AAQ58051.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
12472]
Length = 297
Score = 44.3 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 32/162 (19%), Positives = 51/162 (31%), Gaps = 28/162 (17%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
K+A+ ID N + +L +LL I Y + + L
Sbjct: 3 NRKLAVLIDADN---AQSSL-----IAELLAEVAKYGTAIVKRAY------GDWTTTQLK 48
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122
+ L Q ++F G K+S D L +DA + + + + S D
Sbjct: 49 GWKEVL----HQYAISPIQQFAYTKG----KNSTDSALIIDAMDLLYTGNFDGFCLVSSD 100
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
FT L L+ V L + S D F+
Sbjct: 101 SDFTRLATRLREGGLTV----IGLGEQSKTPRPFIAACDKFV 138
>gi|296167427|ref|ZP_06849827.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295897217|gb|EFG76823.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 239
Score = 44.3 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 16/116 (13%)
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
P +D L GF V AK + + R + +EL +SEGL LV+ S DG
Sbjct: 108 RPWVDALRNVGFAVFAKPKIDEDSDVDRDML---AHIEL-----RRSEGLAALVVASADG 159
Query: 124 C-FTTLVAALQRKVKKVTIVSTVLSDP-SMASDQLRRQADYFMDLAYLKNEIARDP 177
F + + R V ++ ++ASD L F+DL + R+P
Sbjct: 160 QAFREPLEEISRTGVAVQVIGFREHASWALASDTL-----DFVDLEDINGVF-REP 209
>gi|257453692|ref|ZP_05618979.1| protein containing DUF88 [Enhydrobacter aerosaccus SK60]
gi|257448926|gb|EEV23882.1| protein containing DUF88 [Enhydrobacter aerosaccus SK60]
Length = 267
Score = 44.3 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 31/165 (18%), Positives = 57/165 (34%), Gaps = 25/165 (15%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
++A+ ID N AS L LL + I Y Q + +
Sbjct: 14 RLAVLIDADN--ASVNHL------DALLSEIATLGISSVRRAY---GDWTRPQLNSWKNV 62
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126
L L Y+ + ++F+ G+ +S+ ++ A+D +E + + S D FT
Sbjct: 63 L--LSYS-----IQPIQQFSYTTGKNATDASLIID-AMDLL-YTERFDGFCLVSSDSDFT 113
Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
L ++ + V S + D F L + +
Sbjct: 114 RLAQRIREQGLLV-----YGFGRSTTPKPFVQACDRFTYLEFFEE 153
>gi|237784873|ref|YP_002905578.1| hypothetical protein ckrop_0248 [Corynebacterium kroppenstedtii DSM
44385]
gi|237757785|gb|ACR17035.1| hypothetical protein ckrop_0248 [Corynebacterium kroppenstedtii DSM
44385]
Length = 228
Score = 44.3 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 38/117 (32%), Gaps = 24/117 (20%)
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE-GLEHLVI-- 118
+ P +D L GF V AK K F + D + V+
Sbjct: 92 SIRPWIDALRNLGFAVFAKP-KLFDDTDVDP------------DMLAHINRRYDEGVLRS 138
Query: 119 ---FSGDG-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
S DG F + L + V ++ A+ + +A F+DL + +
Sbjct: 139 VYVASADGRNFQPRLEELAAEGIDVAVLGFY----EHATWAVMSEAIRFVDLEDIPD 191
>gi|325290777|ref|YP_004266958.1| protein of unknown function DUF88 [Syntrophobotulus glycolicus DSM
8271]
gi|324966178|gb|ADY56957.1| protein of unknown function DUF88 [Syntrophobotulus glycolicus DSM
8271]
Length = 274
Score = 44.3 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 28/170 (16%), Positives = 59/170 (34%), Gaps = 26/170 (15%)
Query: 11 FIDGANLYASSKALGFDIDYRKLLKAFRSRA-----IVIRAYYYTTVVGDPEQQFSPLHP 65
FID N++ G I ++A A + + Y + + +
Sbjct: 6 FIDYENIWTGLAEKGCRIMPEVFIEALHKYAQSIDVELSVIFLYANFDKEEFWRMQTVFE 65
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSM-DVELAVDA----FEQSEGLEHLVIFS 120
+ + + + + ++ + D EL ++A + + + ++F+
Sbjct: 66 KKSIITRHVYG---------KNSFAQTELRPNAADHELMLEAQEILLTRPDSFDIFLLFT 116
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLR---RQADYFMDLA 167
GDG F +LV ++ KKV I+ L D F++L
Sbjct: 117 GDGDFMSLVRKIRAWGKKVKII----GVKGKIHHDLEPFCESMDVFLELT 162
>gi|192292848|ref|YP_001993453.1| hypothetical protein Rpal_4482 [Rhodopseudomonas palustris TIE-1]
gi|192286597|gb|ACF02978.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1]
Length = 267
Score = 44.3 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 36/95 (37%), Gaps = 7/95 (7%)
Query: 77 VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQR 134
++AK A + K++ D+ L +DA + S E + S D FT L + ++
Sbjct: 57 ILAKHAIIPQQQFAYTTGKNASDITLVIDAMDLLHSGRFEGFCLVSSDSDFTRLASRIRE 116
Query: 135 KVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
+ V + + R+ F+ L
Sbjct: 117 QGVDV----FGFGEQK-TPESFRQACRRFVYTENL 146
>gi|39937021|ref|NP_949297.1| hypothetical protein RPA3960 [Rhodopseudomonas palustris CGA009]
gi|39650878|emb|CAE29401.1| conserved unknown protein [Rhodopseudomonas palustris CGA009]
Length = 267
Score = 44.3 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 36/95 (37%), Gaps = 7/95 (7%)
Query: 77 VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQR 134
++AK A + K++ D+ L +DA + S E + S D FT L + ++
Sbjct: 57 ILAKHAIIPQQQFAYTTGKNASDITLVIDAMDLLHSGRFEGFCLVSSDSDFTRLASRIRE 116
Query: 135 KVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
+ V + + R+ F+ L
Sbjct: 117 QGVDV----FGFGEQK-TPESFRQACRRFVYTENL 146
>gi|257075430|ref|ZP_05569791.1| hypothetical protein Faci_00130 [Ferroplasma acidarmanus fer1]
Length = 193
Score = 44.3 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 7/68 (10%)
Query: 70 LHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTT 127
L GF+ V+ + + +DV+LA+DA E L+I SGDG F
Sbjct: 91 LKNIGFETVSSPLMYRKQG----IFEKGVDVKLAMDATELIHSGIFHRLIIVSGDGDFYP 146
Query: 128 LVA-ALQR 134
+ A++
Sbjct: 147 VAELAVRN 154
>gi|317126626|ref|YP_004100738.1| hypothetical protein Intca_3537 [Intrasporangium calvum DSM 43043]
gi|315590714|gb|ADU50011.1| hypothetical protein Intca_3537 [Intrasporangium calvum DSM 43043]
Length = 359
Score = 44.3 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 30/171 (17%), Positives = 60/171 (35%), Gaps = 28/171 (16%)
Query: 9 ALFIDGANLYASS--KALGFD------IDYRKLLKAFRSRAI------VIRAYYYTTVVG 54
AL++D L A++ + G I Y L+ +A ++R +Y +
Sbjct: 6 ALYVDAGYLLAAAATRVTGTSLRGSVVISYPDLVTGLVDQAESLSGLPLLRLNWYDSGNR 65
Query: 55 DPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG-- 112
+ G K+ T G ++ +D+ + +D
Sbjct: 66 PGGAPDATQES-------IGMLPRVKLRLGRTSPHGEQK---GVDLRIGLDLAAHGRNHV 115
Query: 113 LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTV--LSDPSMASDQLRRQAD 161
++ + + SGD + V Q +V I++ P S+ L R++D
Sbjct: 116 VDIMYLVSGDDDLSEAVEEAQSHGAQVVILAVPDQSGRPHAVSNHLVRESD 166
>gi|301117790|ref|XP_002906623.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262107972|gb|EEY66024.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 564
Score = 44.3 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 37/170 (21%), Positives = 65/170 (38%), Gaps = 19/170 (11%)
Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRS-RAIVIRAYYYTTVVGDPEQQFSPLHPL 66
AL IDGA ++LG +ID+ +L + +Y S L
Sbjct: 15 TALIIDGAYARIHGRSLGGNIDFSRLRTELEEIASTEFDECWYFDSQRRDAPGNSQLASE 74
Query: 67 LDWLHYN---GFQV-----VAKVAKEFTENCGRKR---VKSSMDVELAVDAFEQS--EGL 113
L Y G Q+ K +CG K V+ +D +A + +
Sbjct: 75 FHALKYARPRGPQLQVEIYSTKPRSCKCTSCGHKFNQNVQKGVDNGIATKLLTLTLTRNI 134
Query: 114 EHLVIFSGDGCFTTLVAALQRKVKK-VTIVSTVLSDPSMASDQLRRQADY 162
E +++ SGDG F T + ++ ++ + V +V + + S L++ A
Sbjct: 135 ERVILVSGDGDFYTSLRYVRNELAREVWVVGFLDT----VSGDLQQLASQ 180
>gi|332184991|ref|ZP_08386740.1| hypothetical protein SUS17_244 [Sphingomonas sp. S17]
gi|332014715|gb|EGI56771.1| hypothetical protein SUS17_244 [Sphingomonas sp. S17]
Length = 258
Score = 44.3 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 33/176 (18%), Positives = 59/176 (33%), Gaps = 30/176 (17%)
Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
IAL ID N +++ ID +L V Y L
Sbjct: 8 IALLIDADNAQSAA------IDP--VLTVLAELGTVNVRRAY------GNWSKPGLKGWR 53
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCF 125
D V+ K E + + K++ D+++ +DA + ++ I S D F
Sbjct: 54 D--------VMVKHGIEPQQQFDLTKGKNATDMKMTIDAMDLLFRGRIDGFGIMSSDSDF 105
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD-PDED 180
L +++ + S + ++ F+D+ L NE R P +
Sbjct: 106 MPLATRIRQDG--FPVYGFGNSR---TPEAFKQACSRFIDVGALINEAPRPMPSKP 156
>gi|307331746|ref|ZP_07610850.1| conserved hypothetical protein [Streptomyces violaceusniger Tu
4113]
gi|306882612|gb|EFN13694.1| conserved hypothetical protein [Streptomyces violaceusniger Tu
4113]
Length = 305
Score = 44.3 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 37/189 (19%), Positives = 65/189 (34%), Gaps = 37/189 (19%)
Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53
A+F+D +YA++ L F++D L++AF +A ++R Y++
Sbjct: 37 AIFVDAGYVYAAAGRLVAGTEDRRAFELDAEGLIEAFIDKARTIFPDSRLLRVYWFDGAR 96
Query: 54 GD---PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110
PEQQ P K N + +D + D +
Sbjct: 97 RRIHTPEQQSIAELP---------------DVKVRLGNLNANNQQKGVDSLIRSDLESLA 141
Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDL 166
+ V+ GD + V A Q +V + D ++ L + D DL
Sbjct: 142 RHRAIGDAVLIGGDEDLVSAVEAAQGYGARVHLWGIEALDGRNQAEPLLWEVDSQRTFDL 201
Query: 167 AYLKNEIAR 175
+ K + R
Sbjct: 202 DFCKPYVTR 210
>gi|154506256|ref|ZP_02042994.1| hypothetical protein RUMGNA_03798 [Ruminococcus gnavus ATCC 29149]
gi|153793444|gb|EDN75864.1| hypothetical protein RUMGNA_03798 [Ruminococcus gnavus ATCC 29149]
Length = 320
Score = 44.3 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 41/168 (24%), Positives = 64/168 (38%), Gaps = 27/168 (16%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRK-LLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
E+ AL ID N+ S+K Y K +L V Y + GD ++
Sbjct: 3 ERYALLIDADNV--SAK-------YIKPILDELSKYGNVT----YKRIYGDWTSTYNS-- 47
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
+ L N ++F+ G+ S+M ++ A+D SE LE + S D
Sbjct: 48 SWKEVLLQNSIT----PIQQFSYTHGKNATDSAMIID-AMDMLYTSE-LEGFCLVSSDSD 101
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
FT L + L+ K V + + P R+ D F L L +
Sbjct: 102 FTKLASRLRESGKMVIGMGEDKTPPPF-----RKACDIFTVLELLLED 144
>gi|254233594|ref|ZP_04926920.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
gi|254366657|ref|ZP_04982701.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
Haarlem]
gi|124603387|gb|EAY61662.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
gi|134152169|gb|EBA44214.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
Haarlem]
Length = 243
Score = 44.3 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 44/121 (36%), Gaps = 26/121 (21%)
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG-----LEHLVI 118
P +D L GF V AK K D ++ D + L LV+
Sbjct: 112 RPWVDALRNVGFAVFAKP-------------KVDEDSDVDRDMLAHIDERYREGLAALVV 158
Query: 119 FSGDGC-FTTLVAALQRKVKKVTIVSTVLSDP-SMASDQLRRQADYFMDLAYLKNEIARD 176
S DG F + A+ R V ++ ++ASD L F+DL + R+
Sbjct: 159 ASADGQAFRQPLEAVARSGTPVQVLGFREHASWALASDTL-----EFVDLEDIAGVF-RE 212
Query: 177 P 177
P
Sbjct: 213 P 213
>gi|15607348|ref|NP_214721.1| hypothetical protein Rv0207c [Mycobacterium tuberculosis H37Rv]
gi|31791385|ref|NP_853878.1| hypothetical protein Mb0213c [Mycobacterium bovis AF2122/97]
gi|121636119|ref|YP_976342.1| hypothetical protein BCG_0244c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|148659971|ref|YP_001281494.1| hypothetical protein MRA_0215 [Mycobacterium tuberculosis H37Ra]
gi|148821400|ref|YP_001286154.1| hypothetical protein TBFG_10209 [Mycobacterium tuberculosis F11]
gi|167968795|ref|ZP_02551072.1| hypothetical protein MtubH3_12470 [Mycobacterium tuberculosis
H37Ra]
gi|215406200|ref|ZP_03418381.1| hypothetical protein Mtub0_21436 [Mycobacterium tuberculosis
02_1987]
gi|215414075|ref|ZP_03422732.1| hypothetical protein Mtub9_22088 [Mycobacterium tuberculosis
94_M4241A]
gi|215425412|ref|ZP_03423331.1| hypothetical protein MtubT9_03091 [Mycobacterium tuberculosis T92]
gi|215433128|ref|ZP_03431047.1| hypothetical protein MtubE_21314 [Mycobacterium tuberculosis
EAS054]
gi|215448487|ref|ZP_03435239.1| hypothetical protein MtubT_22033 [Mycobacterium tuberculosis T85]
gi|218755944|ref|ZP_03534740.1| hypothetical protein MtubG1_22014 [Mycobacterium tuberculosis GM
1503]
gi|219556006|ref|ZP_03535082.1| hypothetical protein MtubT1_01380 [Mycobacterium tuberculosis T17]
gi|224988592|ref|YP_002643279.1| hypothetical protein JTY_0213 [Mycobacterium bovis BCG str. Tokyo
172]
gi|254549146|ref|ZP_05139593.1| hypothetical protein Mtube_01561 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|260185072|ref|ZP_05762546.1| hypothetical protein MtubCP_03350 [Mycobacterium tuberculosis
CPHL_A]
gi|260199209|ref|ZP_05766700.1| hypothetical protein MtubT4_03465 [Mycobacterium tuberculosis T46]
gi|260203352|ref|ZP_05770843.1| hypothetical protein MtubK8_03435 [Mycobacterium tuberculosis K85]
gi|289441583|ref|ZP_06431327.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
gi|289445739|ref|ZP_06435483.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
gi|289568110|ref|ZP_06448337.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289572787|ref|ZP_06453014.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
gi|289747974|ref|ZP_06507352.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289748683|ref|ZP_06508061.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289756272|ref|ZP_06515650.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|289760310|ref|ZP_06519688.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|289764323|ref|ZP_06523701.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503]
gi|294994680|ref|ZP_06800371.1| hypothetical protein Mtub2_09257 [Mycobacterium tuberculosis 210]
gi|297632687|ref|ZP_06950467.1| hypothetical protein MtubK4_01111 [Mycobacterium tuberculosis KZN
4207]
gi|297729661|ref|ZP_06958779.1| hypothetical protein MtubKR_01136 [Mycobacterium tuberculosis KZN
R506]
gi|298527599|ref|ZP_07015008.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
gi|313656987|ref|ZP_07813867.1| hypothetical protein MtubKV_01121 [Mycobacterium tuberculosis KZN
V2475]
gi|1871580|emb|CAB07002.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
gi|31616970|emb|CAD93077.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
gi|121491766|emb|CAL70228.1| Conserved hypothetical protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|148504123|gb|ABQ71932.1| hypothetical protein MRA_0215 [Mycobacterium tuberculosis H37Ra]
gi|148719927|gb|ABR04552.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
gi|224771705|dbj|BAH24511.1| hypothetical protein JTY_0213 [Mycobacterium bovis BCG str. Tokyo
172]
gi|289414502|gb|EFD11742.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
gi|289418697|gb|EFD15898.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
gi|289537218|gb|EFD41796.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
gi|289541863|gb|EFD45512.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289688502|gb|EFD55990.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289689270|gb|EFD56699.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289696859|gb|EFD64288.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|289711829|gb|EFD75845.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503]
gi|289715874|gb|EFD79886.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|298497393|gb|EFI32687.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
gi|326905962|gb|EGE52895.1| hypothetical protein TBPG_03934 [Mycobacterium tuberculosis W-148]
gi|328456916|gb|AEB02339.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
4207]
Length = 242
Score = 44.3 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 44/121 (36%), Gaps = 26/121 (21%)
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG-----LEHLVI 118
P +D L GF V AK K D ++ D + L LV+
Sbjct: 111 RPWVDALRNVGFAVFAKP-------------KVDEDSDVDRDMLAHIDERYREGLAALVV 157
Query: 119 FSGDGC-FTTLVAALQRKVKKVTIVSTVLSDP-SMASDQLRRQADYFMDLAYLKNEIARD 176
S DG F + A+ R V ++ ++ASD L F+DL + R+
Sbjct: 158 ASADGQAFRQPLEAVARSGTPVQVLGFREHASWALASDTL-----EFVDLEDIAGVF-RE 211
Query: 177 P 177
P
Sbjct: 212 P 212
>gi|15839587|ref|NP_334624.1| hypothetical protein MT0217 [Mycobacterium tuberculosis CDC1551]
gi|253797129|ref|YP_003030130.1| hypothetical protein TBMG_00208 [Mycobacterium tuberculosis KZN
1435]
gi|308231492|ref|ZP_07663868.1| hypothetical protein TMAG_01343 [Mycobacterium tuberculosis
SUMu001]
gi|308369333|ref|ZP_07417377.2| hypothetical protein TMBG_02678 [Mycobacterium tuberculosis
SUMu002]
gi|308370343|ref|ZP_07666914.1| hypothetical protein TMCG_02418 [Mycobacterium tuberculosis
SUMu003]
gi|308371617|ref|ZP_07667213.1| hypothetical protein TMDG_01679 [Mycobacterium tuberculosis
SUMu004]
gi|308372834|ref|ZP_07667465.1| hypothetical protein TMEG_00637 [Mycobacterium tuberculosis
SUMu005]
gi|308373915|ref|ZP_07434096.2| hypothetical protein TMFG_03169 [Mycobacterium tuberculosis
SUMu006]
gi|308375097|ref|ZP_07667943.1| hypothetical protein TMGG_01685 [Mycobacterium tuberculosis
SUMu007]
gi|308376336|ref|ZP_07438459.2| hypothetical protein TMHG_03210 [Mycobacterium tuberculosis
SUMu008]
gi|308378578|ref|ZP_07483059.2| hypothetical protein TMIG_00494 [Mycobacterium tuberculosis
SUMu009]
gi|308379722|ref|ZP_07669031.1| hypothetical protein TMJG_01392 [Mycobacterium tuberculosis
SUMu010]
gi|308380924|ref|ZP_07669316.1| hypothetical protein TMKG_01392 [Mycobacterium tuberculosis
SUMu011]
gi|308394870|ref|ZP_07491797.2| hypothetical protein TMLG_00955 [Mycobacterium tuberculosis
SUMu012]
gi|13879702|gb|AAK44438.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
gi|253318632|gb|ACT23235.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
1435]
gi|308217130|gb|EFO76529.1| hypothetical protein TMAG_01343 [Mycobacterium tuberculosis
SUMu001]
gi|308327968|gb|EFP16819.1| hypothetical protein TMBG_02678 [Mycobacterium tuberculosis
SUMu002]
gi|308332348|gb|EFP21199.1| hypothetical protein TMCG_02418 [Mycobacterium tuberculosis
SUMu003]
gi|308336100|gb|EFP24951.1| hypothetical protein TMDG_01679 [Mycobacterium tuberculosis
SUMu004]
gi|308339731|gb|EFP28582.1| hypothetical protein TMEG_00637 [Mycobacterium tuberculosis
SUMu005]
gi|308343736|gb|EFP32587.1| hypothetical protein TMFG_03169 [Mycobacterium tuberculosis
SUMu006]
gi|308347457|gb|EFP36308.1| hypothetical protein TMGG_01685 [Mycobacterium tuberculosis
SUMu007]
gi|308351507|gb|EFP40358.1| hypothetical protein TMHG_03210 [Mycobacterium tuberculosis
SUMu008]
gi|308352084|gb|EFP40935.1| hypothetical protein TMIG_00494 [Mycobacterium tuberculosis
SUMu009]
gi|308356034|gb|EFP44885.1| hypothetical protein TMJG_01392 [Mycobacterium tuberculosis
SUMu010]
gi|308359989|gb|EFP48840.1| hypothetical protein TMKG_01392 [Mycobacterium tuberculosis
SUMu011]
gi|308367555|gb|EFP56406.1| hypothetical protein TMLG_00955 [Mycobacterium tuberculosis
SUMu012]
gi|323717196|gb|EGB26405.1| hypothetical protein TMMG_00636 [Mycobacterium tuberculosis
CDC1551A]
Length = 244
Score = 44.3 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 44/121 (36%), Gaps = 26/121 (21%)
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG-----LEHLVI 118
P +D L GF V AK K D ++ D + L LV+
Sbjct: 113 RPWVDALRNVGFAVFAKP-------------KVDEDSDVDRDMLAHIDERYREGLAALVV 159
Query: 119 FSGDGC-FTTLVAALQRKVKKVTIVSTVLSDP-SMASDQLRRQADYFMDLAYLKNEIARD 176
S DG F + A+ R V ++ ++ASD L F+DL + R+
Sbjct: 160 ASADGQAFRQPLEAVARSGTPVQVLGFREHASWALASDTL-----EFVDLEDIAGVF-RE 213
Query: 177 P 177
P
Sbjct: 214 P 214
>gi|328881764|emb|CCA55003.1| hypothetical protein SVEN_1716 [Streptomyces venezuelae ATCC 10712]
Length = 447
Score = 44.3 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 58/147 (39%), Gaps = 18/147 (12%)
Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78
+D+ L++ RA ++R Y++ G P++ P H L + +V
Sbjct: 29 RITVDHAGLIQQLSQRAEAETALPLLRIYWF---DGAPDRVPQPEHRRLRVMP----RVT 81
Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136
++ T + GR K +D + + E + +V+ +GDG + + +
Sbjct: 82 VRLG-ALTRSDGRWAQKG-VDAAMHTELTELARNRACSDIVLVTGDGDLLPGLMSAKEHG 139
Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162
V + + +D S+ L +AD
Sbjct: 140 VAVHLWAVQAADGDYNQSEDLVAEADE 166
>gi|254819495|ref|ZP_05224496.1| hypothetical protein MintA_06199 [Mycobacterium intracellulare ATCC
13950]
Length = 200
Score = 44.3 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 52/156 (33%), Gaps = 22/156 (14%)
Query: 28 IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTE 87
+D +L S ++ Y D + Q+VA+
Sbjct: 56 VDVGAILDYASSFGTLVLTRAYADWSADINAGYRG-------------QLVARAVDLVQL 102
Query: 88 NCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVST 144
K+ D+ LAVDA E L H+VI +GD + L +R + V +
Sbjct: 103 FPAAAYGKNGADIRLAVDAVEDMFRLPDLTHVVIVAGDSDYIPLAQRCKRLGRYVVGIGV 162
Query: 145 VLSDPSMASDQLRRQADYFMDLAYLKNE--IARDPD 178
+ +S L + F+ L + R+P
Sbjct: 163 AGA----SSRALAAACEEFVVYDALPGVPALDREPG 194
>gi|197301939|ref|ZP_03167003.1| hypothetical protein RUMLAC_00661 [Ruminococcus lactaris ATCC
29176]
gi|197299007|gb|EDY33543.1| hypothetical protein RUMLAC_00661 [Ruminococcus lactaris ATCC
29176]
Length = 322
Score = 44.3 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 37/168 (22%), Positives = 60/168 (35%), Gaps = 27/168 (16%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRK-LLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
++ AL ID N+ S+K Y K +L V Y +
Sbjct: 3 DRFALLIDADNV--SAK-------YIKPILDELSKYGNVTYKRIYGDWTKTNNASWK--- 50
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
+ L N ++F+ G+ S+M ++ A+D SE LE + S D
Sbjct: 51 ---EELLQNSIT----PIQQFSYTHGKNATDSAMIID-AMDMLYTSE-LEGFCLVSSDSD 101
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
FT L + L+ K V + + R+ D F +L L +
Sbjct: 102 FTKLASRLRESGKTVIGMGEGKTPSPF-----RKACDIFTELELLLED 144
>gi|32473273|ref|NP_866267.1| hypothetical protein RB4721 [Rhodopirellula baltica SH 1]
gi|32397952|emb|CAD73953.1| conserved hypothetical protein [Rhodopirellula baltica SH 1]
Length = 242
Score = 44.3 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 35/182 (19%), Positives = 60/182 (32%), Gaps = 31/182 (17%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
P IAL ID N A I++ I+ Y V
Sbjct: 5 HPEGSIALLIDADN------APSSKIEF-----------IISELATYGIVNIRKAYGNWT 47
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
L W++ V+ + A T+ + K++ D+ L +DA + + + + S
Sbjct: 48 KRGLEGWIN-----VLHEYAIAPTQCFDLIKGKNATDMALLIDAMDILYTRQVNTFGLVS 102
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
D FT LV L+ K+V S +F+ L + P +
Sbjct: 103 SDCDFTPLVCRLREDGKQVIGFGRQNSPAPFVL-----ACSHFIYLDE--EPTEKAPPKK 155
Query: 181 KK 182
++
Sbjct: 156 RR 157
>gi|309781025|ref|ZP_07675764.1| conserved hypothetical protein [Ralstonia sp. 5_7_47FAA]
gi|308920328|gb|EFP65986.1| conserved hypothetical protein [Ralstonia sp. 5_7_47FAA]
Length = 247
Score = 44.3 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 30/173 (17%), Positives = 52/173 (30%), Gaps = 29/173 (16%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
M ++A+ ID N A+ ++LL+ Y
Sbjct: 9 MAQDALRLAVLIDADNASAAV--------IKELLEEVAK---------YGVATVKRSYGD 51
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118
L+ W + + A + + + K+S D +DA + ++ +
Sbjct: 52 WTTQNLVGWKDHL-----HRHAIQPMQQFAYTKGKNSTDSACIIDAMDLLYGGNVDGFCL 106
Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
S D FT L L+ K V D D F+ + LK
Sbjct: 107 VSSDSDFTRLATRLREAGKVVYGFGERK-----TPDAFIAACDKFVFVEVLKQ 154
>gi|224371038|ref|YP_002605202.1| hypothetical protein HRM2_39800 [Desulfobacterium autotrophicum
HRM2]
gi|223693755|gb|ACN17038.1| hypothetical protein HRM2_39800 [Desulfobacterium autotrophicum
HRM2]
Length = 236
Score = 44.0 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 31/181 (17%), Positives = 55/181 (30%), Gaps = 29/181 (16%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
M + +KIALFID N AS + +L +V Y
Sbjct: 1 MNESTQKIALFIDADNAPASK--------FEDVLSEVAKYGVVTIRKAY---GNWKNPCL 49
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAF--EQSEGLEHLVI 118
LL + + +++ G+ D+ L +DA ++ ++ +
Sbjct: 50 KSWEELL-------HEYAIQPIQQYDLTKGKNAS----DIALVIDAMDVMYTKNIDVMCF 98
Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
S D FT +V + K V + F+ L + P
Sbjct: 99 VSSDCDFTPMVTRALAEGKVVLGFGERKAPSPFV-----NACSKFLFLDQEPEQNGTTPK 153
Query: 179 E 179
+
Sbjct: 154 K 154
>gi|21220543|ref|NP_626322.1| hypothetical protein SCO2062 [Streptomyces coelicolor A3(2)]
gi|256788319|ref|ZP_05526750.1| hypothetical protein SlivT_27854 [Streptomyces lividans TK24]
gi|5596807|emb|CAB51454.1| hypothetical protein [Streptomyces coelicolor A3(2)]
Length = 403
Score = 44.0 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 30/147 (20%), Positives = 59/147 (40%), Gaps = 18/147 (12%)
Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78
+D+ L++ R RA ++R Y++ G P++ P H L + +V
Sbjct: 29 RITVDHAALIQGLRDRAESDTQQPLLRIYWF---DGAPDRVPQPEHRRLRVMP----RVT 81
Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136
++ T + GR K +D + + E + +V+ +GDG + A +
Sbjct: 82 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDVVLVTGDGDLLPGMMAAKEHG 139
Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162
V + + +D S+ L +AD
Sbjct: 140 VAVHLWAVQAADGDYNQSEDLVAEADE 166
>gi|311743916|ref|ZP_07717722.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272]
gi|311313046|gb|EFQ82957.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272]
Length = 325
Score = 44.0 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 27/155 (17%), Positives = 46/155 (29%), Gaps = 20/155 (12%)
Query: 28 IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTE 87
+D ++ S ++ Y ++ Q+V +
Sbjct: 60 VDVGAVIDYASSFGTLVLTRAYADWSAPVNAEYR-------------HQLVGRAVDLVQL 106
Query: 88 NCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVST 144
K+ D+ LAVDA E L H+VI +GD + L +R + V
Sbjct: 107 FPAAAYAKNGADIRLAVDAVEDMFRLPDLTHVVIVAGDSDYIALAQRCKRLGRYV----V 162
Query: 145 VLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
+ S L D + L P +
Sbjct: 163 GIGVAGSTSKSLAAACDELVTYDALPGITPITPRQ 197
>gi|212224114|ref|YP_002307350.1| hypothetical protein TON_0965 [Thermococcus onnurineus NA1]
gi|212009071|gb|ACJ16453.1| hypothetical protein, conserved [Thermococcus onnurineus NA1]
Length = 170
Score = 44.0 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 32/73 (43%), Gaps = 6/73 (8%)
Query: 94 VKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151
V DV +A++A E +E + + + D F ++ +RK K+ ++
Sbjct: 89 VAGDTDVRIAIEAMELIYNSDVEVIALATRDADFLPIINEAKRKGKETIVIGVEPGF--- 145
Query: 152 ASDQLRRQADYFM 164
S L+ ADY +
Sbjct: 146 -SVALQNAADYVI 157
>gi|294676826|ref|YP_003577441.1| hypothetical protein RCAP_rcc01279 [Rhodobacter capsulatus SB 1003]
gi|294475646|gb|ADE85034.1| conserved hypothetical protein [Rhodobacter capsulatus SB 1003]
Length = 214
Score = 44.0 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 46/133 (34%), Gaps = 16/133 (12%)
Query: 7 KIALFIDGANLYASSKALGFD----IDYRKLLKAF--RSRAIVIRAYYYTTVVGDPEQQF 60
+ AL+IDG NLY + LG + Y +L + + ++R Y T +
Sbjct: 13 RAALYIDGFNLYHAIDRLGQPHLKWLSYWRLGQVILPQKTQKLVRVVYCTAFYPGSAGKR 72
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEF-------TENCGRKRVKSSMDVELAVDAFEQS--E 111
++ G +V + + K+ D+ LA+ + +
Sbjct: 73 WRHEQVIAAQRAEGVEVALGHYVHERMMCRSCGDRWEKPTEKAG-DINLAIHLMHDAFED 131
Query: 112 GLEHLVIFSGDGC 124
+H + + D
Sbjct: 132 VFDHAYLLTADSD 144
>gi|325001258|ref|ZP_08122370.1| hypothetical protein PseP1_20962 [Pseudonocardia sp. P1]
Length = 203
Score = 44.0 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 41/116 (35%), Gaps = 15/116 (12%)
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELA-VDAFEQSEGLEHLVIFSGD 122
P ++ L GF V AK + LA +D L H+V+ SGD
Sbjct: 72 RPWVEALRNVGFAVFAKPKTSDDSDVDDD--------MLAHIDLRSGEGRLRHVVVASGD 123
Query: 123 GC-FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
G F + L VT++ + ++ F+DL + R+P
Sbjct: 124 GRAFKDPLEKLVEGGTDVTVIGFREYAGFAQASEVIS----FLDLEDMDGVF-REP 174
>gi|319956985|ref|YP_004168248.1| hypothetical protein Nitsa_1246 [Nitratifractor salsuginis DSM
16511]
gi|319419389|gb|ADV46499.1| hypothetical protein Nitsa_1246 [Nitratifractor salsuginis DSM
16511]
Length = 254
Score = 44.0 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 35/183 (19%), Positives = 62/183 (33%), Gaps = 33/183 (18%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
M + ++ IA+ ID N AS A+ + +LK VI Y QQ
Sbjct: 1 MQEKKKHIAMLIDCDN--ASPYAI------KGILKELSKYGEVIVRQAY---GNWNSQQL 49
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVI 118
+P L L ++ K ++F G+ D+ + +DA + + L+ +
Sbjct: 50 APWMERL--LEHS-----IKPIQQFDYTKGKNAT----DIAMVIDAMDIMYTKDLDGFAL 98
Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
+ D FT L L +T+ F+ + R+
Sbjct: 99 VTSDSDFTPLAQRLMSNG--LTVYGFGEKK---TPKAFINSCSQFI----YTENLEREEK 149
Query: 179 EDK 181
+ K
Sbjct: 150 KSK 152
>gi|327540413|gb|EGF26998.1| protein containing DUF88 [Rhodopirellula baltica WH47]
Length = 242
Score = 44.0 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 34/182 (18%), Positives = 62/182 (34%), Gaps = 31/182 (17%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
P IAL ID N A I++ ++ + +V Y
Sbjct: 5 HPEGSIALLIDADN------APSSKIEF--IISELATYGVVNIRKAY---------GNWT 47
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
L W++ V+ + A T+ + K++ D+ L +DA + + + + S
Sbjct: 48 KRGLEGWIN-----VLHEYAIAPTQCFDLIKGKNATDMALLIDAMDILYTRQVNTFGLVS 102
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
D FT LV L+ K+V S +F+ L + P +
Sbjct: 103 SDCDFTPLVCRLREDGKQVIGFGRQNSPAPFVL-----ACSHFIYLDE--EPTEKTPPKK 155
Query: 181 KK 182
++
Sbjct: 156 RR 157
>gi|322368949|ref|ZP_08043516.1| hypothetical protein ZOD2009_05667 [Haladaptatus paucihalophilus
DX253]
gi|320551680|gb|EFW93327.1| hypothetical protein ZOD2009_05667 [Haladaptatus paucihalophilus
DX253]
Length = 160
Score = 44.0 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Query: 96 SSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMAS 153
+DV+LA+DA E + E ++ L I S D F ++ R + ++ S
Sbjct: 82 GDVDVKLAIDATELALDERVDVLAIASRDTDFKPVLEKAARNGVRTVAIAPGEYGR---S 138
Query: 154 DQLRRQA 160
D L+ A
Sbjct: 139 DALQNAA 145
>gi|224827245|ref|ZP_03700339.1| protein of unknown function DUF88 [Lutiella nitroferrum 2002]
gi|224600534|gb|EEG06723.1| protein of unknown function DUF88 [Lutiella nitroferrum 2002]
Length = 258
Score = 44.0 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 26/167 (15%), Positives = 50/167 (29%), Gaps = 30/167 (17%)
Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
+A+ ID N+ + G+ D +L+ ++ Y GD + L
Sbjct: 4 VAVLIDADNV-----SPGWIED---VLEEAGKLGVLALKRVY----GDFSRHDKAWRDLC 51
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCF 125
+ ++F G+ D+ L +DA + S + + S D F
Sbjct: 52 A-------RFAIHPIQQFPNTKGKNAS----DITLVIDAMDMLHSGRYQSFCLVSSDSDF 100
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
+ L L+ +V F+ + L
Sbjct: 101 SRLATRLREDGLEV-----WGFGEEKTPSAFVNACSKFVYVEVLGGV 142
>gi|330824578|ref|YP_004387881.1| hypothetical protein Alide2_1990 [Alicycliphilus denitrificans
K601]
gi|329309950|gb|AEB84365.1| Domain of unknown function DUF88 [Alicycliphilus denitrificans
K601]
Length = 239
Score = 44.0 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 30/173 (17%), Positives = 52/173 (30%), Gaps = 29/173 (16%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
M ++A+ ID N A+ ++LL+ Y
Sbjct: 1 MAQDALRLAVLIDADNASAAV--------IKELLEEVAK---------YGVATVKRSYGD 43
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118
L+ W + + A + + + K+S D +DA + ++ +
Sbjct: 44 WTTQNLVGWKDHL-----HRHAIQPMQQFAYTKGKNSTDSACIIDAMDLLYGGNVDGFCL 98
Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
S D FT L L+ K V D D F+ + LK
Sbjct: 99 VSSDSDFTRLATRLREAGKVVYGFGERK-----TPDAFIAACDKFVFVEVLKQ 146
>gi|258546012|ref|ZP_05706246.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826]
gi|258518741|gb|EEV87600.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826]
Length = 265
Score = 44.0 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 54/166 (32%), Gaps = 26/166 (15%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
++A+ ID N ASS+ + +L+ Y V + S ++
Sbjct: 17 RLAVLIDADN--ASSQTI------NAILEETTKFGDATVKRIYGNFVSGGGKWKSVINEF 68
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126
K ++F G+ M ++ A+D +E E + S D FT
Sbjct: 69 -----------AIKPMQQFAYTKGKNATDGFMIID-AMDLL-YTERFEGFCLVSSDSDFT 115
Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
L L+ + V + + R F+ + L +
Sbjct: 116 ALAIRLKEQG--VMVYGFGKKQ---TPEAFRNACSQFIYVENLMPK 156
>gi|58583915|ref|YP_202931.1| hypothetical protein XOO4292 [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|58428509|gb|AAW77546.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
KACC10331]
Length = 274
Score = 44.0 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 33/172 (19%), Positives = 54/172 (31%), Gaps = 29/172 (16%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
+P ++IAL ID N A ID +L + Y +
Sbjct: 4 NPDKRIALLIDADN------APAGKID--VVLAEVARYGVANVRRAY------GNWKSPQ 49
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
L LH + + ++F + G+ D+ + +DA + + L+ I S
Sbjct: 50 LKGWEAALHDD----AIRPIQQFAYSSGKNAS----DMAMVIDAMDLLYARNLDGFAIVS 101
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
D FT LV L KV + F + L +
Sbjct: 102 SDADFTPLVMRLLTDGMKVYGFGEKKTPAPFV-----NACSKFTYVEALGQQ 148
>gi|306821460|ref|ZP_07455063.1| conserved hypothetical protein [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304550475|gb|EFM38463.1| conserved hypothetical protein [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 572
Score = 43.6 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 35/181 (19%), Positives = 60/181 (33%), Gaps = 37/181 (20%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
D ++K A+ ID N+ K +K Y
Sbjct: 2 DDQKKYAVLIDAENIAY------------KYVKYIMGEMANYGVVTY------------- 36
Query: 63 LHPLLDWLHYN--GFQ-VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLV 117
+DW N G++ V+ + A ++ K+S D + +DA + S+ ++
Sbjct: 37 KRAYMDWSAQNATGWKSVLLENAISPVQSIAYTSGKNSTDSTIIIDAMDILYSKTVDGFC 96
Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF--MDLAYLKNEIAR 175
I S D FT L L+ V + S + F ++L K EI +
Sbjct: 97 IVSSDSDFTKLATRLRESGMTV-----IGMGESKTPKAFIEACNSFKVLNLVVNKEEIEK 151
Query: 176 D 176
Sbjct: 152 S 152
>gi|57640691|ref|YP_183169.1| hypothetical protein TK0756 [Thermococcus kodakarensis KOD1]
gi|57159015|dbj|BAD84945.1| hypothetical protein, conserved, DUF88 family [Thermococcus
kodakarensis KOD1]
Length = 166
Score = 43.6 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 38/91 (41%), Gaps = 12/91 (13%)
Query: 94 VKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151
V DV +A++A E ++ + + S D F ++ +R+ K+ ++
Sbjct: 85 VAGDTDVRVAIEAMELIYNSDVDVIALASRDADFLPIIIEAKRRGKETVVIGVDPGF--- 141
Query: 152 ASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182
S L+ ADY + + R E+K+
Sbjct: 142 -SVALQNAADYVIKME------GRKTPENKE 165
>gi|289772213|ref|ZP_06531591.1| conserved hypothetical protein [Streptomyces lividans TK24]
gi|289702412|gb|EFD69841.1| conserved hypothetical protein [Streptomyces lividans TK24]
Length = 406
Score = 43.6 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 30/147 (20%), Positives = 59/147 (40%), Gaps = 18/147 (12%)
Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78
+D+ L++ R RA ++R Y++ G P++ P H L + +V
Sbjct: 32 RITVDHAALIQGLRDRAESDTQQPLLRIYWF---DGAPDRVPQPEHRRLRVMP----RVT 84
Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136
++ T + GR K +D + + E + +V+ +GDG + A +
Sbjct: 85 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDVVLVTGDGDLLPGMMAAKEHG 142
Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162
V + + +D S+ L +AD
Sbjct: 143 VAVHLWAVQAADGDYNQSEDLVAEADE 169
>gi|325924315|ref|ZP_08185859.1| hypothetical protein XGA_4921 [Xanthomonas gardneri ATCC 19865]
gi|325545180|gb|EGD16490.1| hypothetical protein XGA_4921 [Xanthomonas gardneri ATCC 19865]
Length = 276
Score = 43.6 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 31/172 (18%), Positives = 51/172 (29%), Gaps = 29/172 (16%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
+P ++IAL ID N A ID ++ Y
Sbjct: 6 NPDKRIALLIDADN------APAGKID-----------VVLAEVARYGVANVRRAYGNWK 48
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
L +W + ++F + G+ D+ + +DA + + L+ I S
Sbjct: 49 SPHLKNWEAAL-HDYAIRPIQQFAYSSGKNAS----DMAMVIDAMDLLYARNLDGFAIVS 103
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
D FT LV L KV + F + L +
Sbjct: 104 SDADFTPLVMRLLTDGMKVYGFGEKKTPAPFV-----NACSKFTYVEALGEQ 150
>gi|256822960|ref|YP_003146923.1| hypothetical protein Kkor_1743 [Kangiella koreensis DSM 16069]
gi|256796499|gb|ACV27155.1| protein of unknown function DUF88 [Kangiella koreensis DSM 16069]
Length = 236
Score = 43.6 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 33/166 (19%), Positives = 58/166 (34%), Gaps = 29/166 (17%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
+ + IALF+D N ASSK + +L + +VI Y + +
Sbjct: 2 EHNKHIALFVDADN--ASSKY------FDLILSDLANHGMVIIRKAY------GNWKNAN 47
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAF--EQSEGLEHLVIFS 120
L D L + + ++F G+ D+ +A+D + ++ + +
Sbjct: 48 LKGWEDILL----EFAIQPIQQFDLTKGKNAT----DLAMAIDVMDVLYGKDVDIFCLVT 99
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
D FT L L + K V D R F++L
Sbjct: 100 SDCDFTPLATRLINEGKLVFGYGETK-----TPDAFRNACTRFLEL 140
>gi|153954651|ref|YP_001395416.1| hypothetical protein CKL_2033 [Clostridium kluyveri DSM 555]
gi|219855122|ref|YP_002472244.1| hypothetical protein CKR_1779 [Clostridium kluyveri NBRC 12016]
gi|146347509|gb|EDK34045.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
gi|219568846|dbj|BAH06830.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 250
Score = 43.6 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 37/180 (20%), Positives = 61/180 (33%), Gaps = 30/180 (16%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
D +KIA+ ID N+ S K + + D + Y + GD +
Sbjct: 2 DKDKKIAVLIDADNV--SEKYIKYIFD------EISNHGTPT----YKRIYGDWTKPQLA 49
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
V+ + + G K+S D L +DA + S ++ I S
Sbjct: 50 SWK----------NVLLNYSISPIQQYGYTTGKNSTDAALIIDAMDILYSNNVDGFCIVS 99
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
D FT L A L+ V + + S + F L L + ++ P E+
Sbjct: 100 SDSDFTKLAARLREAGMFVIGMGEKKTPTPFIS-----ACEKFKYLEVLASMASK-PAEN 153
>gi|219128570|ref|XP_002184482.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403932|gb|EEC43881.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 401
Score = 43.6 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 21/150 (14%), Positives = 52/150 (34%), Gaps = 33/150 (22%)
Query: 31 RKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCG 90
+ ++ + + ++ Y ++Q + L +GF +V N
Sbjct: 34 KAIVNSVSEQGRIVDRRLY--FDFSNQEQGNRW----SGLDSSGFDLV---------NTP 78
Query: 91 RKRVKSSMDVELAVDAFEQSEGLE------------HLVIFSGDGCFTTLVAALQRKVKK 138
++ K ++D ++ D + +V+ + DG + + L+ +
Sbjct: 79 QRNQKETLDKKMIADVLLFC--WDSATRNQGTNKGSCVVLVTSDGDYAYTLNKLRDRG-- 134
Query: 139 VTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
+ S V+ +D L AD + L +
Sbjct: 135 --VSSVVIYGHGNVADILISSADVALSLKH 162
>gi|254173701|ref|ZP_04880373.1| conserved hypothetical protein TIGR00288 [Thermococcus sp. AM4]
gi|214032393|gb|EEB73223.1| conserved hypothetical protein TIGR00288 [Thermococcus sp. AM4]
Length = 169
Score = 43.6 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 34/163 (20%), Positives = 64/163 (39%), Gaps = 32/163 (19%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
++IAL IDG N+ K LG + L++ + A Q++P
Sbjct: 30 KRIALLIDGPNMLR--KELGVKL--EDLVEVLSEIGDIRVAKVVL-------NQYAP-QG 77
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDG 123
L++ + GF+ + G VK LAV+A + + ++ + I + +
Sbjct: 78 LIEAVSNQGFEPMI--------VSGETGVK------LAVEAMKEIYNPHIDVIAIATRNA 123
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
F ++ + K K+ ++ S L+ ADY + L
Sbjct: 124 EFLPVILKAKEKGKETVVIGVEPGF----SVALKHAADYAIVL 162
>gi|254411600|ref|ZP_05025376.1| protein-glutamate methylesterase CheB [Microcoleus chthonoplastes
PCC 7420]
gi|196181322|gb|EDX76310.1| protein-glutamate methylesterase CheB [Microcoleus chthonoplastes
PCC 7420]
Length = 341
Score = 43.6 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 50/154 (32%), Gaps = 22/154 (14%)
Query: 32 KLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGR 91
+L + + + A YT +P + + NG V + ++ EN R
Sbjct: 198 RLAERLAQKCQIKVAEGYTLGQLEPGLAWIAPGDYHLIIERNGTGVHLRTHQDAPENSCR 257
Query: 92 KRVKSSMDVELAVDAF--EQSEGL---EHLVIFSGDG-CFTTLVAALQRKVKKV----TI 141
AVD ++ +I +G G +++ +V
Sbjct: 258 P----------AVDVLFRSVAKLYGANTLAIILTGMGQDGRLGCECIRQVGGQVWVQDEA 307
Query: 142 VSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
S V P M ++ AD + L + EI R
Sbjct: 308 TSVVWGMPGMVANS--GLADRVIPLPDIAAEIIR 339
>gi|325913823|ref|ZP_08176182.1| hypothetical protein XVE_0042 [Xanthomonas vesicatoria ATCC 35937]
gi|325539898|gb|EGD11535.1| hypothetical protein XVE_0042 [Xanthomonas vesicatoria ATCC 35937]
Length = 277
Score = 43.6 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 28/172 (16%), Positives = 54/172 (31%), Gaps = 29/172 (16%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
+P ++IAL ID N + A D+ ++ + + + + + E
Sbjct: 4 NPDKRIALLIDADN----APAGKIDVVLAEVARYGVANVRRAYGNWKSPHLKGWEAALHD 59
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
+ ++F + G+ D+ + +DA + + L+ I S
Sbjct: 60 Y--------------AIRPIQQFAYSSGKNAS----DMAMVIDAMDLLYARNLDGFAIVS 101
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
D FT LV L KV + F + L +
Sbjct: 102 SDADFTPLVMRLLTDGMKVYGFGEKKTPAPFV-----NACSKFTYVEALGEQ 148
>gi|71066424|ref|YP_265151.1| hypothetical protein Psyc_1869 [Psychrobacter arcticus 273-4]
gi|71039409|gb|AAZ19717.1| conserved hypothetical protein [Psychrobacter arcticus 273-4]
Length = 335
Score = 43.6 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 30/170 (17%), Positives = 52/170 (30%), Gaps = 29/170 (17%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
+K A+ ID N + I+ +L+ I Y + L
Sbjct: 1 MKKFAVLIDADN------SSHRSIEP--ILEEIAKYGIASIKRIY------GDWSIEALQ 46
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122
D L N ++F K + D++L +DA + + ++ I S D
Sbjct: 47 SWRDKLLPNAIT----PVQQF----AYVSQKDATDMKLVIDAMDILYAGDVDGFCIVSSD 98
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
FT L + ++ V D F+ + L E
Sbjct: 99 SDFTPLASRIRESGLLV-----YGFGKKSTVKSFVNACDKFVYVENLLPE 143
>gi|145225022|ref|YP_001135700.1| hypothetical protein Mflv_4443 [Mycobacterium gilvum PYR-GCK]
gi|145217508|gb|ABP46912.1| protein of unknown function DUF88 [Mycobacterium gilvum PYR-GCK]
Length = 329
Score = 43.6 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 40/204 (19%), Positives = 67/204 (32%), Gaps = 45/204 (22%)
Query: 7 KIALFID-------------GANLYASSKALGFD----------IDYRKLLKAFRSRAIV 43
++A+++D G N + KA GFD +D ++ S +
Sbjct: 35 RVAVYLDFDNIVLSRYDQVNGRNSFQRDKAKGFDEVRDKLDRATVDVGAIIDFASSFGTL 94
Query: 44 IRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELA 103
+ Y + ++ Q+V + K+ D+ LA
Sbjct: 95 VLTRAYADWSAEINARYRG-------------QLVGRAVDLVQLFPAAAYGKNGADIRLA 141
Query: 104 VDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160
VDA E L H+VI +GD + L +R + V + S M L
Sbjct: 142 VDAVEDMFRLPDLTHVVIVAGDSDYIALAQRCKRLGRYVVGIGVAGSSSRM----LAAAC 197
Query: 161 DYFMDLAYLK--NEIARDPDEDKK 182
D F+ L +P D+K
Sbjct: 198 DEFVTYDTLPGVPVFEPEPVADEK 221
>gi|256419852|ref|YP_003120505.1| hypothetical protein Cpin_0806 [Chitinophaga pinensis DSM 2588]
gi|256034760|gb|ACU58304.1| protein of unknown function DUF88 [Chitinophaga pinensis DSM 2588]
Length = 246
Score = 43.6 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 62/183 (33%), Gaps = 29/183 (15%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
M + ++A+ ID N+ + + +++++ I Y +
Sbjct: 1 MENKDLRLAVLIDADNIPYN------KV--KEMMEEVAKYGIPTFKRIY------GDWTK 46
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118
L L N ++++ G+ D + +DA + + ++ +
Sbjct: 47 PTLAGWKTVLLDNAIT----PIQQYSYTSGKNAT----DSAMIIDAMDILYTGRVDGFCL 98
Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
+ D FT L L+ +V L + S R D F+ L L +E+
Sbjct: 99 ITSDSDFTRLATRLREAGMRV----FGLGEKKTPS-AFRAACDKFIYLEILVSEVKDASV 153
Query: 179 EDK 181
+ K
Sbjct: 154 KPK 156
>gi|15679895|ref|NP_277013.1| hypothetical protein MTH1913 [Methanothermobacter
thermautotrophicus str. Delta H]
gi|2623047|gb|AAB86373.1| conserved protein [Methanothermobacter thermautotrophicus str.
Delta H]
Length = 173
Score = 43.6 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 30/164 (18%), Positives = 57/164 (34%), Gaps = 38/164 (23%)
Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAY---YYTTVVGDPEQQFSPLH 64
I L +DG N+ L K F ++R Y VG
Sbjct: 26 IGLLVDGPNM---------------LRKEFSLNLDLVRQIMSEYGNMRVGKVLLNQYASD 70
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGD 122
L++ + GF + V DV +AV+A E ++ + + + D
Sbjct: 71 KLIEAIVNQGFTPIV--------------VAWDTDVYMAVEAMELIYNPNIDIIALMTRD 116
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
F ++ + K ++ ++P ++ L+ AD+ + L
Sbjct: 117 ADFLPIINKAKENGKDTIVIG---AEPGFSA-ALQNSADHAIIL 156
>gi|294011667|ref|YP_003545127.1| hypothetical protein SJA_C1-16810 [Sphingobium japonicum UT26S]
gi|292674997|dbj|BAI96515.1| conserved hypothetical protein [Sphingobium japonicum UT26S]
Length = 244
Score = 43.6 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 7/90 (7%)
Query: 82 AKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKV 139
A E + R K++ D+++ +DA + S + + S D FT LV L+++ V
Sbjct: 62 AIETQQQFDLTRGKNATDMKMTIDAMDLMASGRVTGFGLMSSDSDFTPLVTRLRQEGLPV 121
Query: 140 TIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
T R F+D+ L
Sbjct: 122 YGFGTDK-----TPQAFRSACTRFIDVGAL 146
>gi|146308706|ref|YP_001189171.1| hypothetical protein Pmen_3691 [Pseudomonas mendocina ymp]
gi|145576907|gb|ABP86439.1| hypothetical protein Pmen_3691 [Pseudomonas mendocina ymp]
Length = 272
Score = 43.6 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 18/98 (18%), Positives = 36/98 (36%), Gaps = 7/98 (7%)
Query: 76 QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQ 133
+V+ + + + + K++ D L +DA + + + + S D FT L A L+
Sbjct: 60 KVLLDHSIQPIQQFAYTKGKNATDSSLIIDAMDLLYTRRFDGFCLVSSDSDFTRLAARLR 119
Query: 134 RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
+ V + S D F+ L+
Sbjct: 120 EEGLTVYGFGEEKTPSPFVS-----ACDKFIYTEILRA 152
>gi|320590086|gb|EFX02531.1| hypothetical protein CMQ_5892 [Grosmannia clavigera kw1407]
Length = 261
Score = 43.6 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 35/179 (19%), Positives = 55/179 (30%), Gaps = 30/179 (16%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
K+A+ ID N A +D LL Y + L
Sbjct: 6 KLAVLIDADN------APPTKVDL--LLAEVSKYGTAHVKRAY------GDWTGQGLTKW 51
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124
D L + Q ++F G+ D + +DA + + L+ I S D
Sbjct: 52 KDNLLRHSIQ----PIQQFAYTQGKNAT----DSAMIIDAMDLLYTNRLDGFCIVSSDSD 103
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL-KNEIARDPDEDKK 182
FT L + ++ V + S D F+ L K+E+ P K
Sbjct: 104 FTRLASRIRESGLTVFGFGEKKTPQPFVS-----ACDKFIYFEILNKDEVVHSPTATSK 157
>gi|115397957|ref|XP_001214570.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114192761|gb|EAU34461.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 885
Score = 43.6 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 16/93 (17%), Positives = 30/93 (32%), Gaps = 11/93 (11%)
Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKV 136
+ ++F G+ D + +DA + + + + S D FT L A ++
Sbjct: 692 IQPVQQFAYTHGKNAT----DSAMIIDAMDLLYANRFDGFCLVSSDSDFTRLAARIRESG 747
Query: 137 KKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
V + S D F+ L
Sbjct: 748 ATVYGFGVHNTPKPFVS-----ACDKFIYTENL 775
>gi|225568810|ref|ZP_03777835.1| hypothetical protein CLOHYLEM_04889 [Clostridium hylemonae DSM
15053]
gi|225162309|gb|EEG74928.1| hypothetical protein CLOHYLEM_04889 [Clostridium hylemonae DSM
15053]
Length = 313
Score = 43.6 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 55/167 (32%), Gaps = 31/167 (18%)
Query: 9 ALFIDGANLYASSKALGFDIDYRK-LLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
AL ID N+ S+K Y K +L + Y + +
Sbjct: 7 ALLIDADNI--SAK-------YIKPILTELSKYGNITYKRIY------GDWTSTQHSKWK 51
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEH--LVIFSGDGCF 125
D L N ++F+ G+ D + +DA + + I S D F
Sbjct: 52 DELLTNSIT----PIQQFSYTQGKNAT----DSAMIIDAMDILYTNDVHGFCIVSSDSDF 103
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
T LV+ L+ K V + + R+ D F L L NE
Sbjct: 104 TRLVSRLRESGKLVIGMGENKTPEPF-----RKACDKFTILENLLNE 145
>gi|149913234|ref|ZP_01901768.1| hypothetical protein RAZWK3B_04560 [Roseobacter sp. AzwK-3b]
gi|149813640|gb|EDM73466.1| hypothetical protein RAZWK3B_04560 [Roseobacter sp. AzwK-3b]
Length = 225
Score = 43.6 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 30/159 (18%), Positives = 56/159 (35%), Gaps = 33/159 (20%)
Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
+++ +DG N+ S K G K+L Y Q+ S
Sbjct: 5 VSVLVDGDNI--SGKHAG------KILSVAAQHGEPTLVRVYA-----DAQRPS------ 45
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTT 127
DW G++++ + G + + + + L ++ + VI S DG FT
Sbjct: 46 DWHSAIGYRML---------HSGTGKNAADILLALDALELLLAKNMRCFVIASSDGDFTH 96
Query: 128 LVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
L L+ KV + V + + R F+++
Sbjct: 97 LATRLREHGAKVIGIGEVKAPSAF-----RACCSDFVEI 130
>gi|330981753|gb|EGH79856.1| hypothetical protein PSYAP_24831 [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 197
Score = 43.6 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 26/73 (35%), Gaps = 7/73 (9%)
Query: 99 DVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
D+ +AVDA + ++ + S D FT LV L+ + K+V +
Sbjct: 12 DMAMAVDAMDVLFNKPVDVFCLVSSDCDFTPLVMRLRAEGKQVVGFGERKAPEPFV---- 67
Query: 157 RRQADYFMDLAYL 169
F+
Sbjct: 68 -NACSRFLYFDQY 79
>gi|118463993|ref|YP_884088.1| hypothetical protein MAV_4967 [Mycobacterium avium 104]
gi|254777406|ref|ZP_05218922.1| hypothetical protein MaviaA2_22446 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|118165280|gb|ABK66177.1| conserved hypothetical protein [Mycobacterium avium 104]
Length = 237
Score = 43.6 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 16/116 (13%)
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
P +D L GF V AK + + R + +EL ++EGL LV+ S DG
Sbjct: 106 RPWVDALRNVGFAVFAKPKIDEDSDVDRDML---AHIEL-----RRTEGLAALVVASADG 157
Query: 124 C-FTTLVAALQRKVKKVTIVSTVLSDP-SMASDQLRRQADYFMDLAYLKNEIARDP 177
F + + R V ++ ++ASD L F+DL + R+P
Sbjct: 158 QAFRQPLEEIARSGVSVAVIGFREHASWALASDTL-----DFVDLEDISGVF-REP 207
>gi|300933129|ref|ZP_07148385.1| hypothetical protein CresD4_03618 [Corynebacterium resistens DSM
45100]
Length = 240
Score = 43.6 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 46/118 (38%), Gaps = 20/118 (16%)
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG---LEHLVIFS 120
P ++ L GF V AK + TE+ +D ++ +D L+ +V+ S
Sbjct: 112 RPWVEALRNVGFAVFAKP--KLTEDS-------DVDPDM-LDHIRLRHQQGTLDGVVVAS 161
Query: 121 GDG-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
DG F + L I TVL + L +A F+DL + R+P
Sbjct: 162 ADGQNFQDFLEELAE-----EIPVTVLGFQEHTTWALVSEAIEFIDLEDIPGVF-REP 213
>gi|297199039|ref|ZP_06916436.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
gi|297147270|gb|EFH28556.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
Length = 406
Score = 43.6 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 30/147 (20%), Positives = 59/147 (40%), Gaps = 18/147 (12%)
Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78
+D+ L++ R RA ++R Y++ G P++ P H L + +V
Sbjct: 29 RITVDHAALVQGLRDRAESDTERPLLRIYWF---DGAPDRVPQPEHRRLRVMP----RVT 81
Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136
++ T + GR K +D + + E + +V+ +GDG + A +
Sbjct: 82 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDIVLVTGDGDLLPGMMAAKEHG 139
Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162
V + + +D S+ L +AD
Sbjct: 140 VAVHLWAVQAADGDYNQSEDLVAEADE 166
>gi|57640690|ref|YP_183168.1| hypothetical protein TK0755 [Thermococcus kodakarensis KOD1]
gi|57159014|dbj|BAD84944.1| hypothetical protein, conserved, DUF88 family [Thermococcus
kodakarensis KOD1]
Length = 165
Score = 43.2 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 33/165 (20%), Positives = 61/165 (36%), Gaps = 36/165 (21%)
Query: 6 EKIALFIDGANLYASSKALGFDI-DYRKLLKAFRS-RAIVIRAYYYTTVVGDPEQQFSPL 63
++IAL IDG N+ K LG + D + L R + Y
Sbjct: 30 KRIALLIDGPNILR--KELGVKLEDIAEALSEIGDIRVAKVILNQYAP------------ 75
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSG 121
L++ + GF+ + G VK LAV+A + + ++ + + +
Sbjct: 76 QGLIEAVSNQGFEPII--------VSGETGVK------LAVEAMKEIYNPHIDVIALATR 121
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
+ F ++ + K K+ ++ S L+ ADY + L
Sbjct: 122 NAEFLPVILKAKEKGKETVVIGVEPGF----SVALKHAADYTIIL 162
>gi|41409740|ref|NP_962576.1| hypothetical protein MAP3642c [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41398572|gb|AAS06192.1| hypothetical protein MAP_3642c [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 237
Score = 43.2 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 16/116 (13%)
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
P +D L GF V AK + + R + +EL ++EGL LV+ S DG
Sbjct: 106 RPWVDALRNVGFAVFAKPKIDEDSDVDRDML---AHIEL-----RRTEGLAALVVASADG 157
Query: 124 C-FTTLVAALQRKVKKVTIVSTVLSDP-SMASDQLRRQADYFMDLAYLKNEIARDP 177
F + + R V ++ ++ASD L F+DL + R+P
Sbjct: 158 QAFRQPLEEIARSGVSVAVIGFREHASWALASDTL-----DFVDLEDISGVF-REP 207
>gi|302550773|ref|ZP_07303115.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM
40736]
gi|302468391|gb|EFL31484.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM
40736]
Length = 406
Score = 43.2 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 30/147 (20%), Positives = 59/147 (40%), Gaps = 18/147 (12%)
Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78
+D+ L++ R RA ++R Y++ G P++ P H L + +V
Sbjct: 32 RITVDHAALIQGLRERAESDTQQPLLRIYWF---DGAPDRVPQPEHRRLRVMP----RVT 84
Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136
++ T + GR K +D + + E + +V+ +GDG + A +
Sbjct: 85 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDVVLVTGDGDLLPGMMAAKEHG 142
Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162
V + + +D S+ L +AD
Sbjct: 143 VAVHLWAVQAADGDYNQSEDLVAEADE 169
>gi|289664829|ref|ZP_06486410.1| hypothetical protein XcampvN_17615 [Xanthomonas campestris pv.
vasculorum NCPPB702]
gi|289671395|ref|ZP_06492470.1| hypothetical protein XcampmN_23667 [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 276
Score = 43.2 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 28/172 (16%), Positives = 54/172 (31%), Gaps = 29/172 (16%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
+P ++IAL ID N + A D+ ++ + + + + + E
Sbjct: 6 NPDKRIALLIDADN----APAGKIDVVLAEVARYGVANVRRAYGNWKSPHLKGWEAALHD 61
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
+ ++F + G+ D+ + +DA + + L+ I S
Sbjct: 62 Y--------------AIRPIQQFAYSSGKNAS----DMAMVIDAMDLLYARNLDGFAIVS 103
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
D FT LV L KV + F + L +
Sbjct: 104 SDADFTPLVMRLLTDGMKVYGFGEKKTPAPFV-----NACSKFTYVEALGEQ 150
>gi|254427448|ref|ZP_05041155.1| hypothetical protein ADG881_678 [Alcanivorax sp. DG881]
gi|196193617|gb|EDX88576.1| hypothetical protein ADG881_678 [Alcanivorax sp. DG881]
Length = 235
Score = 43.2 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 45/110 (40%), Gaps = 10/110 (9%)
Query: 68 DWLHYN--GFQ-VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122
DW N G++ V+ K + + + + K++ D + +DA + ++ L + S D
Sbjct: 33 DWTKPNLGGWKSVLLKHSVQPIQQFAYTQGKNATDCSMIIDAMDLLYTKQLSGFCLVSSD 92
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
FT L A L+ + V + + D F+ L+++
Sbjct: 93 SDFTRLAARLREEGLTVYGFGERKTPGPFVA-----ACDKFIYTEVLRSD 137
>gi|297161308|gb|ADI11020.1| hypothetical protein SBI_07900 [Streptomyces bingchenggensis BCW-1]
Length = 457
Score = 43.2 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 59/147 (40%), Gaps = 18/147 (12%)
Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78
+D+ L++ R RA ++R Y++ G P++ P H L + +V
Sbjct: 29 RISVDHATLIQGLRERAEAETERPLLRIYWF---DGAPDRVPQPEHRRLRVMP----RVT 81
Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136
++ T + GR K +D + + E + +V+ +GDG + + +
Sbjct: 82 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDIVLVTGDGDLLPGLMSAKEHG 139
Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162
V + + +D S+ L +AD
Sbjct: 140 VAVHLWAVQAADGDYNQSEDLVAEADE 166
>gi|302518506|ref|ZP_07270848.1| conserved hypothetical protein [Streptomyces sp. SPB78]
gi|302427401|gb|EFK99216.1| conserved hypothetical protein [Streptomyces sp. SPB78]
Length = 457
Score = 43.2 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 58/147 (39%), Gaps = 18/147 (12%)
Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78
+D+ L++ R RA ++R Y++ G P++ P H L +V
Sbjct: 163 RITVDHAALIQRLRERAEEETGQPLLRIYWF---DGAPDRVPQPEHRRLRVRP----RVT 215
Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136
++ T + GR K +D + + E + +V+ +GDG + + +
Sbjct: 216 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDIVLVTGDGDLLPGLVSAKEHG 273
Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162
V + + +D S+ L +AD
Sbjct: 274 VAVHLWAVQAADGDYNQSEDLVAEADE 300
>gi|320011309|gb|ADW06159.1| hypothetical protein Sfla_4758 [Streptomyces flavogriseus ATCC
33331]
Length = 417
Score = 43.2 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 59/147 (40%), Gaps = 18/147 (12%)
Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78
+D+ L++ R RA ++R Y++ G P++ P H L + +V
Sbjct: 29 RITVDHTALIQGLRERAEADTEQPLLRIYWF---DGAPDRVPQPEHRRLRVMP----RVT 81
Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136
++ T + GR K +D + + E + +V+ +GDG + + +
Sbjct: 82 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDVVLVTGDGDLLPGLMSAKEHG 139
Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162
V + + +D S+ L +AD
Sbjct: 140 VAVHLWAVQAADGDYNQSEDLVAEADE 166
>gi|291450828|ref|ZP_06590218.1| conserved hypothetical protein [Streptomyces albus J1074]
gi|291353777|gb|EFE80679.1| conserved hypothetical protein [Streptomyces albus J1074]
Length = 403
Score = 43.2 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 58/147 (39%), Gaps = 18/147 (12%)
Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78
+D+ L++ R RA ++R Y++ G P++ P H L + +V
Sbjct: 23 RISVDHATLVRQLRERAEAETAQPLLRIYWF---DGAPDRVPQPEHRRLRVMP----RVT 75
Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136
++ T + GR K +D + + E + +V+ +GDG + A +
Sbjct: 76 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNKACSDIVLVTGDGDLLPGMTAAKEHG 133
Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162
V + + + S+ L +AD
Sbjct: 134 VAVHLWAVQAAGGDYNQSEDLVAEADE 160
>gi|84625703|ref|YP_453075.1| hypothetical protein XOO_4046 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|84369643|dbj|BAE70801.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
Length = 276
Score = 43.2 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 31/172 (18%), Positives = 50/172 (29%), Gaps = 29/172 (16%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
+P ++IAL ID N A ID ++ Y
Sbjct: 6 NPDKRIALLIDADN------APAGKID-----------VVLAEVARYGVANVRRAYGNWK 48
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
L W + ++F + G+ D+ + +DA + + L+ I S
Sbjct: 49 SPHLKRWEAAL-HDYAIRPIQQFAYSSGKNAS----DMAMVIDAMDLLYARNLDGFAIVS 103
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
D FT LV L KV + F + L +
Sbjct: 104 SDADFTPLVMRLLTDGMKVYGFGEKKTPAPFV-----NACSKFTYVEALGQQ 150
>gi|239931834|ref|ZP_04688787.1| hypothetical protein SghaA1_26677 [Streptomyces ghanaensis ATCC
14672]
gi|291440202|ref|ZP_06579592.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
gi|291343097|gb|EFE70053.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
Length = 403
Score = 43.2 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 30/147 (20%), Positives = 59/147 (40%), Gaps = 18/147 (12%)
Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78
+D+ L++ R RA ++R Y++ G P++ P H L + +V
Sbjct: 29 RITVDHAALIQGLRERAESDTRQPLLRIYWF---DGAPDRVPQPEHRRLRVMP----RVT 81
Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136
++ T + GR K +D + + E + +V+ +GDG + A +
Sbjct: 82 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDIVLVTGDGDLLPGMMAAKEHG 139
Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162
V + + +D S+ L +AD
Sbjct: 140 VAVHLWAVQAADGDYNQSEDLVAEADE 166
>gi|304437583|ref|ZP_07397538.1| conserved hypothetical protein [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304369396|gb|EFM23066.1| conserved hypothetical protein [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 227
Score = 43.2 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 35/88 (39%), Gaps = 6/88 (6%)
Query: 51 TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110
+ D + QF + L + QV KE + K +D+++ +D +
Sbjct: 103 GKLADEQAQFLLREDITRKLCRSALQVT--DLKE-QDFLLDVSQKG-VDMKIGLDIASLA 158
Query: 111 --EGLEHLVIFSGDGCFTTLVAALQRKV 136
+ ++ +V+ SGD F +R+
Sbjct: 159 YKQQVDQIVLISGDSDFVPAAKLARREG 186
>gi|239978948|ref|ZP_04701472.1| hypothetical protein SalbJ_05917 [Streptomyces albus J1074]
Length = 409
Score = 43.2 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 58/147 (39%), Gaps = 18/147 (12%)
Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78
+D+ L++ R RA ++R Y++ G P++ P H L + +V
Sbjct: 29 RISVDHATLVRQLRERAEAETAQPLLRIYWF---DGAPDRVPQPEHRRLRVMP----RVT 81
Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136
++ T + GR K +D + + E + +V+ +GDG + A +
Sbjct: 82 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNKACSDIVLVTGDGDLLPGMTAAKEHG 139
Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162
V + + + S+ L +AD
Sbjct: 140 VAVHLWAVQAAGGDYNQSEDLVAEADE 166
>gi|302546171|ref|ZP_07298513.1| conserved hypothetical protein [Streptomyces hygroscopicus ATCC
53653]
gi|302463789|gb|EFL26882.1| conserved hypothetical protein [Streptomyces himastatinicus ATCC
53653]
Length = 435
Score = 43.2 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 59/147 (40%), Gaps = 18/147 (12%)
Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78
+D+ L++ R RA ++R Y++ G P++ P H L + +V
Sbjct: 29 RISVDHATLIQGLRERAEAETERPLLRIYWF---DGAPDRVPQPEHRRLRVMP----RVT 81
Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136
++ T + GR K +D + + E + +V+ +GDG + + +
Sbjct: 82 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDIVLVTGDGDLLPGLMSAKEHG 139
Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162
V + + +D S+ L +AD
Sbjct: 140 VAVHLWAVQAADGDYNQSEDLVAEADE 166
>gi|260574190|ref|ZP_05842195.1| protein of unknown function DUF88 [Rhodobacter sp. SW2]
gi|259023656|gb|EEW26947.1| protein of unknown function DUF88 [Rhodobacter sp. SW2]
Length = 252
Score = 43.2 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 18/87 (20%), Positives = 32/87 (36%), Gaps = 8/87 (9%)
Query: 99 DVELAVDAF--EQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
D+ L + A S + V+ S D FT L A ++ + V + +
Sbjct: 78 DIGLVISAMDFLHSGLFDAFVLVSSDSDFTRLAARIREQGLDVYGIGEKK-----TPEAF 132
Query: 157 RRQADYFMDLAYL-KNEIARDPDEDKK 182
R F+ + L E AR+ ++
Sbjct: 133 RMACKRFIYVENLGAEEPAREAPRPER 159
>gi|120402029|ref|YP_951858.1| hypothetical protein Mvan_1014 [Mycobacterium vanbaalenii PYR-1]
gi|119954847|gb|ABM11852.1| protein of unknown function DUF88 [Mycobacterium vanbaalenii PYR-1]
Length = 299
Score = 43.2 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 7/75 (9%)
Query: 93 RVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDP 149
K+ D+ LAVDA E L H+VI GD + L +R + V + S
Sbjct: 104 YGKNGADIRLAVDAVEDMFRLPDLTHVVIVGGDSDYIALAQRCKRLGRYVVGIGVAGSSS 163
Query: 150 SMASDQLRRQADYFM 164
M L D F+
Sbjct: 164 RM----LAAACDEFV 174
>gi|67924850|ref|ZP_00518246.1| hypothetical protein CwatDRAFT_1822 [Crocosphaera watsonii WH 8501]
gi|67853309|gb|EAM48672.1| hypothetical protein CwatDRAFT_1822 [Crocosphaera watsonii WH 8501]
Length = 235
Score = 43.2 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 26/182 (14%), Positives = 55/182 (30%), Gaps = 31/182 (17%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
++A+ ID N+ A+ LL+ A Q +
Sbjct: 8 SSNTRLAVLIDAENVSANI--------IEHLLQEVAKYG---TANVKRIYGDWTNSQLNS 56
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
L+ L + ++F G+ D L +DA + + + + S
Sbjct: 57 WKSKLNKLA-------LQPIQQFRYTTGKNAT----DSALIIDAMDLLYTNNFDGFCLVS 105
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
D FT L + ++ ++ + + + F+ L + P +
Sbjct: 106 SDSDFTRLASRIRESG----LIVYGFGEKVKTPEAFVVACNKFIYTDILAY---KQPSGN 158
Query: 181 KK 182
+K
Sbjct: 159 QK 160
>gi|315446769|ref|YP_004079648.1| hypothetical protein Mspyr1_52890 [Mycobacterium sp. Spyr1]
gi|315265072|gb|ADU01814.1| Protein of unknown function DUF88 [Mycobacterium sp. Spyr1]
Length = 171
Score = 43.2 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 108 EQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS 143
++ +V+ SGDG FT +AAL + K T+V+
Sbjct: 99 NIADRFTEVVLVSGDGIFTHAIAALASRGVKTTVVA 134
>gi|291550583|emb|CBL26845.1| Uncharacterized conserved protein [Ruminococcus torques L2-14]
Length = 339
Score = 43.2 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 43/179 (24%), Positives = 68/179 (37%), Gaps = 29/179 (16%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRK-LLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
++ AL ID N+ S+K Y K +L V Y + GD + S
Sbjct: 3 DRFALLIDADNV--SAK-------YIKPILDELSKYGNVT----YKRIYGDWTKSNSA-- 47
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
+ L N ++F+ G+ S+M ++ A+D SE LE + S D
Sbjct: 48 SWKEELLQNSIT----PIQQFSYTQGKNSTDSAMIID-AMDMLYTSE-LEGFCLVSSDSD 101
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE--IARDPDEDK 181
FT L + L+ K V + + R+ D F L L + I ++ E K
Sbjct: 102 FTKLASRLRESGKMVIGMGEDKTPLPF-----RKACDIFTVLEVLLEDNTIEKEESEGK 155
>gi|254785235|ref|YP_003072663.1| tryptophan halogenase PrnA [Teredinibacter turnerae T7901]
gi|237686769|gb|ACR14033.1| tryptophan halogenase PrnA [Teredinibacter turnerae T7901]
Length = 500
Score = 43.2 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 53/129 (41%), Gaps = 15/129 (11%)
Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
+ P I + IDG N +A + D ++ + S + YY+ PE S
Sbjct: 96 WHPFGNIGVDIDGHNFFAFLQKARKQGDPAQMWQYAPSAVLGEAGRYYSPGAATPE---S 152
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIF 119
L + LH++ +V AK K F+E G + V +E VDA + ++ L +
Sbjct: 153 FLSGVNYALHFDAVKV-AKYLKRFSEALGIQHV-----METVVDA-SLHDNGFIDSLTLK 205
Query: 120 SG---DGCF 125
G G F
Sbjct: 206 DGRRLAGDF 214
>gi|150389764|ref|YP_001319813.1| hypothetical protein Amet_1991 [Alkaliphilus metalliredigens QYMF]
gi|149949626|gb|ABR48154.1| conserved hypothetical protein [Alkaliphilus metalliredigens QYMF]
Length = 250
Score = 43.2 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 32/171 (18%), Positives = 55/171 (32%), Gaps = 29/171 (16%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
+ +KIA+ ID N+ S K + F D + Y Q S
Sbjct: 2 ENDKKIAVLIDADNV--SGKYIKFIFD------EISNHGTPTFKRIY---GDWTNPQLSS 50
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
+L + + ++++ G+ D L +DA + S ++ I S
Sbjct: 51 WKSVL-----LNYSIT--PIQQYSYTTGKNAT----DAALIIDAMDILYSNNVDGFCIVS 99
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
D FT L A L+ V + + + + F L L
Sbjct: 100 SDSDFTRLAARLREAGMYVIGMGEKKTPAPFIA-----ACEKFKYLEVLAA 145
>gi|188574761|ref|YP_001911690.1| hypothetical protein PXO_03707 [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|188519213|gb|ACD57158.1| protein of unknown function [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 276
Score = 43.2 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 31/172 (18%), Positives = 50/172 (29%), Gaps = 29/172 (16%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
+P ++IAL ID N A ID ++ Y
Sbjct: 6 NPDKRIALLIDADN------APAGKID-----------VVLAEVARYGVANVRRAYGNWK 48
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
L W + ++F + G+ D+ + +DA + + L+ I S
Sbjct: 49 SPHLKRWEAAL-HDYAIRPIQQFAYSSGKNAS----DMAMVIDAMDLLYARNLDGFAIVS 103
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
D FT LV L KV + F + L +
Sbjct: 104 SDADFTPLVMRLLTDGMKVYGFGEKKTPAPFV-----NACSKFTYVEALGQQ 150
>gi|120612954|ref|YP_972632.1| hypothetical protein Aave_4318 [Acidovorax citrulli AAC00-1]
gi|120591418|gb|ABM34858.1| protein of unknown function DUF88 [Acidovorax citrulli AAC00-1]
Length = 298
Score = 43.2 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 30/89 (33%), Gaps = 13/89 (14%)
Query: 79 AKVAKEFTENCGRKRVKSSM-DVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRK 135
+ ++F + + D+ + VDA E ++ + I S D FT LV L+ K
Sbjct: 68 VRPIQQF-----DYSRRKNATDMAMTVDAMELLYTDRPDAFGIVSSDADFTPLVMHLRAK 122
Query: 136 VKKVTIVSTVLSDPSMASDQLRRQADYFM 164
V + F+
Sbjct: 123 GAAVYGFGAQQTPRPFV-----NACSRFL 146
>gi|189347523|ref|YP_001944052.1| hypothetical protein Clim_2044 [Chlorobium limicola DSM 245]
gi|189341670|gb|ACD91073.1| conserved hypothetical protein [Chlorobium limicola DSM 245]
Length = 249
Score = 43.2 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 39/100 (39%), Gaps = 7/100 (7%)
Query: 76 QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQ 133
+++ + + + + G + K++ D + +DA + + + I S D FT L + L+
Sbjct: 55 ELLLQHSIQPIQQFGYTKGKNATDSAMIIDAMDLLYTGKFDGFCIVSSDSDFTKLASRLR 114
Query: 134 RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
V + S D F+ L+ +I
Sbjct: 115 ESGLTVYGFGEKKTPSPFVS-----ACDKFIYTELLRAKI 149
>gi|163783250|ref|ZP_02178244.1| hypothetical protein HG1285_14539 [Hydrogenivirga sp. 128-5-R1-1]
gi|159881584|gb|EDP75094.1| hypothetical protein HG1285_14539 [Hydrogenivirga sp. 128-5-R1-1]
Length = 205
Score = 43.2 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 33/207 (15%), Positives = 71/207 (34%), Gaps = 39/207 (18%)
Query: 5 REKIALFIDGANLYASSKALGFDI----------DYRKLL----KAFRSRAIVIRAYYYT 50
+K+A+ +D NL + + D KLL V R ++Y
Sbjct: 1 MKKVAILVDWENLRKTLERAFKKFRISPDKFSYNDVDKLLLFIMSLLEEDEEVYRIFFYV 60
Query: 51 TVVG------------DPEQQFSPLHP----LLDWLHYNGFQVVAK---VAKEFTENCGR 91
+ D ++++ ++ L+ L + K + +
Sbjct: 61 SEPPKEARWRSATYSIDMDEKYRKIYENAVTFLESLKTKDLVSIRKGKLEFRGYNSQNKP 120
Query: 92 KRVKSSMDVELAVDA--FEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDP 149
+ +D+ + +D ++ +++FS D + + +V I+ T
Sbjct: 121 LFTQKQVDMLIGLDMAHLSYLRLVDRVMVFSLDKDLIPALKIARVNGLQV-IIPTYKGLR 179
Query: 150 SMASDQLRRQAD--YFMDLAYLKNEIA 174
AS +L+ AD ++DLA I+
Sbjct: 180 Q-ASPELQEHADFIRYVDLAERLRNIS 205
>gi|315445391|ref|YP_004078270.1| hypothetical protein Mspyr1_38410 [Mycobacterium sp. Spyr1]
gi|315263694|gb|ADU00436.1| uncharacterized conserved protein [Mycobacterium sp. Spyr1]
Length = 302
Score = 42.8 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 37/95 (38%), Gaps = 9/95 (9%)
Query: 93 RVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDP 149
K+ D+ LAVDA E L H+VI +GD + L +R + V + S
Sbjct: 104 YGKNGADIRLAVDAVEDMFRLPDLTHVVIVAGDSDYIALAQRCKRLGRYVVGIGVAGSSS 163
Query: 150 SMASDQLRRQADYFMDLAYLK--NEIARDPDEDKK 182
M L D F+ L +P D+K
Sbjct: 164 RM----LAAACDEFVTYDTLPGVPVFEPEPVADEK 194
>gi|254382567|ref|ZP_04997925.1| conserved hypothetical protein [Streptomyces sp. Mg1]
gi|194341470|gb|EDX22436.1| conserved hypothetical protein [Streptomyces sp. Mg1]
Length = 431
Score = 42.8 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 59/147 (40%), Gaps = 18/147 (12%)
Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78
+D+ L++ R RA ++R Y++ G P++ P H L + +V
Sbjct: 29 RITVDHAALIQGLRERAEADTEQPLLRIYWF---DGAPDRVPQPEHRRLRVMP----RVT 81
Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136
++ T + GR K +D + + E + +V+ +GDG + + +
Sbjct: 82 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDVVLVTGDGDLLPGLMSAKEHG 139
Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162
V + + +D S+ L +AD
Sbjct: 140 VAVHLWAVQAADGDYNQSEDLVAEADE 166
>gi|322836790|ref|YP_004210704.1| hypothetical protein AciX9_4647 [Acidobacterium sp. MP5ACTX9]
gi|321165877|gb|ADW71577.1| hypothetical protein AciX9_4647 [Acidobacterium sp. MP5ACTX9]
Length = 213
Score = 42.8 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 23/155 (14%), Positives = 50/155 (32%), Gaps = 22/155 (14%)
Query: 6 EKIALFIDGANLYA-SSKALGFD-IDYRKLLKAFRSRA-IVIRAYYYTTVVGDPEQQFSP 62
++ +++DG NLY + + F ++ L+++ ++ Y+T V P
Sbjct: 5 KRTYVYVDGFNLYYRTLRKTKFKWLNLEALVRSLLDDENEIVCIRYFTAPVSGKFDPGVP 64
Query: 63 --LHPLLDWLHYNG----------FQVVAKVAKEFTENCGRK-----RVKSSMDVELAVD 105
L L + + + + DV LA
Sbjct: 65 VRQQRYLQALRTLPTVSIHEGNFLTRAKIRPLVHPAPDGPTHVEIWNTEEKGSDVNLATY 124
Query: 106 AFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKK 138
+ + + V+ S D V ++ ++KK
Sbjct: 125 LIHDAWRDLFDVAVVLSQDTDLNEPVRIVRDEIKK 159
>gi|294494973|ref|YP_003541466.1| hypothetical protein Mmah_0289 [Methanohalophilus mahii DSM 5219]
gi|292665972|gb|ADE35821.1| protein of unknown function DUF88 [Methanohalophilus mahii DSM
5219]
Length = 258
Score = 42.8 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 7/76 (9%)
Query: 99 DVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
D L +DA + SE L+ I S D FT L + ++ +KV + + +
Sbjct: 79 DSSLIIDAMDLLYSEPLDGFCIVSSDSDFTRLSSRIRESGRKVYGFGELKTPKPFIA--- 135
Query: 157 RRQADYFMDLAYLKNE 172
D F+ L+ E
Sbjct: 136 --ACDKFIYTENLRKE 149
>gi|118618529|ref|YP_906861.1| hypothetical protein MUL_3170 [Mycobacterium ulcerans Agy99]
gi|118570639|gb|ABL05390.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length = 288
Score = 42.8 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 32/182 (17%), Positives = 57/182 (31%), Gaps = 41/182 (22%)
Query: 7 KIALFID-------------GANLYASSKALGFD--------IDYRKLLKAFRSRAIVIR 45
++A++ D G N + K+ G + +D ++ S ++
Sbjct: 8 RVAVYFDFDNIVISRYEQVHGRNTFHRDKSKGLEQERLQLATVDLGAIIDFASSFGTLVL 67
Query: 46 AYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVD 105
Y D + Q+V + K+ ++ LAVD
Sbjct: 68 TRAYADWSADVNAGYHG-------------QLVGRAVDLVQLFPAASYGKNGANIRLAVD 114
Query: 106 AFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162
A E L H+VI GD + L +R + V + +S L D
Sbjct: 115 AVEDMFRLPDLTHVVIVGGDSDYIALAQRCKRLGRYV----VGIGVAGASSGSLAAACDE 170
Query: 163 FM 164
F+
Sbjct: 171 FV 172
>gi|294056251|ref|YP_003549909.1| protein of unknown function DUF88 [Coraliomargarita akajimensis DSM
45221]
gi|293615584|gb|ADE55739.1| protein of unknown function DUF88 [Coraliomargarita akajimensis DSM
45221]
Length = 253
Score = 42.8 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 30/170 (17%), Positives = 59/170 (34%), Gaps = 31/170 (18%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
M E IAL ID N A+ ID+ ++ S V Y
Sbjct: 1 MPQTNESIALLIDADNAPAA------KIDF--IISELASYGTVNIRRAYGNWKKA----- 47
Query: 61 SPLHPLLDWLHYNGF-QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLV 117
+G+ +V+ + + + + + K++ D+ L +DA + ++ ++
Sbjct: 48 ----------GLSGWEKVLHEHSIQPVQLFDLTKGKNATDMALLIDAMDILYTKEVQTFC 97
Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
+ + D FT L L+ K+V + + +F L
Sbjct: 98 LVTSDCDFTPLCQRLRADGKRVLGFGSKTAPAPFV-----NSCSHFHYLD 142
>gi|254822116|ref|ZP_05227117.1| hypothetical protein MintA_19432 [Mycobacterium intracellulare ATCC
13950]
Length = 240
Score = 42.8 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 16/116 (13%)
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
P +D L GF V AK + + R + +EL ++EGL LV+ S DG
Sbjct: 109 RPWVDALRNVGFAVFAKPKIDEDSDVDRDML---AHIEL-----RRTEGLAALVVASADG 160
Query: 124 C-FTTLVAALQRKVKKVTIVSTVLSDP-SMASDQLRRQADYFMDLAYLKNEIARDP 177
F + + R V ++ ++ASD L F+DL + R+P
Sbjct: 161 QAFRQPLEEIARSGTSVQVIGFREHASWALASDTL-----DFVDLEEIAGVF-REP 210
>gi|242398823|ref|YP_002994247.1| hypothetical protein TSIB_0837 [Thermococcus sibiricus MM 739]
gi|242265216|gb|ACS89898.1| hypothetical protein TSIB_0837 [Thermococcus sibiricus MM 739]
Length = 174
Score = 42.8 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 34/163 (20%), Positives = 59/163 (36%), Gaps = 32/163 (19%)
Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
P + I L IDG N+ F I + +A + A Q++P
Sbjct: 28 PPKTIGLIIDGPNI----LRKEFGIKLENIKEALEKIGNIRVAKVVL-------NQYAP- 75
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVI--FSG 121
L++ + GF+ + V DV +A++A E + VI +
Sbjct: 76 QGLIEAVVNQGFEPII--------------VAGDTDVRIAIEAMELIYNSDIEVIGFATR 121
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
D F ++ +RK K+ ++ S L+ ADY +
Sbjct: 122 DADFLPIINEGKRKGKETVVIGVEPGF----SVALQNAADYVI 160
>gi|300859364|ref|YP_003784347.1| hypothetical protein cpfrc_01947 [Corynebacterium
pseudotuberculosis FRC41]
gi|300686818|gb|ADK29740.1| hypothetical protein cpfrc_01947 [Corynebacterium
pseudotuberculosis FRC41]
gi|302207047|gb|ADL11389.1| Conserved hypothetical protein [Corynebacterium pseudotuberculosis
C231]
gi|302331607|gb|ADL21801.1| Conserved hypothetical protein [Corynebacterium pseudotuberculosis
1002]
gi|308277300|gb|ADO27199.1| Conserved hypothetical protein [Corynebacterium pseudotuberculosis
I19]
Length = 219
Score = 42.8 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 47/117 (40%), Gaps = 17/117 (14%)
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELA--VDAFEQSEGLEHLVIFSG 121
P ++ L GF V AK + ++ +D ++ + Q+ L+ LV+ S
Sbjct: 88 RPWVEALRNIGFAVFAKP---------KLSEETDVDPDMLAHIRLRHQAGKLKGLVVASA 138
Query: 122 DG-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
DG F + L + VT++ +D+ A F+DL + RDP
Sbjct: 139 DGQNFKDTLDELAAEGVAVTVLGFHEHASWAVADE----ALTFVDLEEVPGVF-RDP 190
>gi|218245522|ref|YP_002370893.1| hypothetical protein PCC8801_0650 [Cyanothece sp. PCC 8801]
gi|257058559|ref|YP_003136447.1| hypothetical protein Cyan8802_0670 [Cyanothece sp. PCC 8802]
gi|218166000|gb|ACK64737.1| protein of unknown function DUF88 [Cyanothece sp. PCC 8801]
gi|256588725|gb|ACU99611.1| protein of unknown function DUF88 [Cyanothece sp. PCC 8802]
Length = 234
Score = 42.8 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 27/173 (15%), Positives = 53/173 (30%), Gaps = 28/173 (16%)
Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
+++A+ ID N+ AS LL+ A Q +
Sbjct: 6 LSSNKRLAVLIDADNVSASV--------IEALLQEIAKYG---TANVKRIYGDWTSNQLN 54
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIF 119
L+ K A + + K+S D L +DA + + + +
Sbjct: 55 SWKNQLN-----------KFAIQPMQQFKYTMGKNSTDSALIIDAMDLLYTGNFDGFCLV 103
Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
S D FT L + ++ ++ + + F+ L+N+
Sbjct: 104 SSDSDFTRLASRIRESG----LIVYGFGEKQKTPSAFVVACNKFIYTDILENQ 152
>gi|145241746|ref|XP_001393519.1| hypothetical protein ANI_1_1160084 [Aspergillus niger CBS 513.88]
gi|134078059|emb|CAK40142.1| unnamed protein product [Aspergillus niger]
Length = 253
Score = 42.8 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 44/169 (26%), Gaps = 29/169 (17%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
D K A+ ID N S LL Y
Sbjct: 4 DSVPKFAVLIDADNAAYSVIHP--------LLAEIARYGTAHAKRAY---------GDWS 46
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
L W + + E + K+S D + +DA + + + + S
Sbjct: 47 SPNLTRWKDQL-----LQHSIEPIQQFAYTYGKNSTDSAMIIDAMDLLYTRRYDGFCLVS 101
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
D FT L A ++ V + + D F+ L
Sbjct: 102 SDSDFTRLAARIRESGLVVYGFGEQKTPKPFVA-----ACDKFIYTENL 145
>gi|302533928|ref|ZP_07286270.1| conserved hypothetical protein [Streptomyces sp. C]
gi|302442823|gb|EFL14639.1| conserved hypothetical protein [Streptomyces sp. C]
Length = 425
Score = 42.8 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 59/147 (40%), Gaps = 18/147 (12%)
Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78
+D+ L++ R RA ++R Y++ G P++ P H L + +V
Sbjct: 29 RITVDHSALIQGLRERAEADTQQPLLRIYWF---DGAPDRVPQPEHRRLRVMP----RVT 81
Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136
++ T + GR K +D + + E + +V+ +GDG + + +
Sbjct: 82 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDVVLVTGDGDLLPGLMSAKEHG 139
Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162
V + + +D S+ L +AD
Sbjct: 140 VAVHLWAVQAADGDYNQSEDLVAEADE 166
>gi|237808074|ref|YP_002892514.1| hypothetical protein Tola_1311 [Tolumonas auensis DSM 9187]
gi|237500335|gb|ACQ92928.1| protein of unknown function DUF88 [Tolumonas auensis DSM 9187]
Length = 239
Score = 42.8 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 34/181 (18%), Positives = 58/181 (32%), Gaps = 32/181 (17%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
EKIALFID N + A D+ +L +V Y +
Sbjct: 2 QSNEKIALFIDADN----APAARIDM----VLSELARYGVVNIRKAY------GNWKNPT 47
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAF--EQSEGLEHLVIFS 120
L D L + + ++F G+ D+ L +D ++ ++ + + S
Sbjct: 48 LKSWEDVL----HEYAIQPIQQFDLTKGKNAT----DMALVIDVMDVLYTKKVDIICLVS 99
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE---IARDP 177
D FT LV K V + + F+ L + +A+ P
Sbjct: 100 SDCDFTPLVTRTLSDGKFVIGFGERKAPVAFV-----NSCSRFLFLDQQVEQNITVAKPP 154
Query: 178 D 178
Sbjct: 155 R 155
>gi|212224115|ref|YP_002307351.1| hypothetical protein TON_0966 [Thermococcus onnurineus NA1]
gi|212009072|gb|ACJ16454.1| hypothetical protein, conserved [Thermococcus onnurineus NA1]
Length = 170
Score = 42.8 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 35/166 (21%), Positives = 61/166 (36%), Gaps = 36/166 (21%)
Query: 6 EKIALFIDGANLYASSKALGFDI-DYRKLLKAFRS-RAIVIRAYYYTTVVGDPEQQFSPL 63
+KIAL IDG N+ K G + D +L+ R + Y
Sbjct: 31 KKIALLIDGPNILR--KEFGVKLEDIVDVLEDIGDLRVAKVILNQYAP------------ 76
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSG 121
L++ + GF+VV G VK LAV+A + ++ + + +
Sbjct: 77 QGLIEAVSNQGFEVVV--------VSGETGVK------LAVEAMREIYNPNIDVIALATR 122
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
+ F ++ + K K+ ++ S L+ ADY + L
Sbjct: 123 NAEFLPVILKAKEKGKETIVIGIEPGF----SAALKHAADYTIILT 164
>gi|87303496|ref|ZP_01086279.1| hypothetical protein WH5701_09555 [Synechococcus sp. WH 5701]
gi|87281909|gb|EAQ73872.1| hypothetical protein WH5701_09555 [Synechococcus sp. WH 5701]
Length = 132
Score = 42.8 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 29/78 (37%), Gaps = 7/78 (8%)
Query: 99 DVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
+V L +DA + S ++ + S D T L A ++ V + +
Sbjct: 18 EVALIIDAMDLLHSGRVDGFWLVSSDNDVTRLAARIRAAGLAVYAFGEKKTPKPFVA--- 74
Query: 157 RRQADYFMDLAYLKNEIA 174
D F+D L+ ++
Sbjct: 75 --ACDKFIDTEILRKALS 90
>gi|239623453|ref|ZP_04666484.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239521484|gb|EEQ61350.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 308
Score = 42.8 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 56/171 (32%), Gaps = 29/171 (16%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
M + A+ ID N+ S K + + +L + I Y ++
Sbjct: 1 MEQSERRFAVLIDADNV--SPKYIKY------ILDEVSDQGIATYKRIY--GDWTDNEKR 50
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118
S + LLDW ++++ G+ D + +DA + S ++ +
Sbjct: 51 SWKNVLLDW--------SVNPIQQYSYTTGKNAT----DSAMIIDAMDILYSGNVDGFCL 98
Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
S D FT L L+ V + + R D F L +
Sbjct: 99 VSSDSDFTKLAQRLREAGMFVMGIGEQKTPKPF-----RAACDTFKLLEII 144
>gi|307292778|ref|ZP_07572624.1| hypothetical protein SphchDRAFT_0251 [Sphingobium chlorophenolicum
L-1]
gi|306880844|gb|EFN12060.1| hypothetical protein SphchDRAFT_0251 [Sphingobium chlorophenolicum
L-1]
Length = 246
Score = 42.8 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 29/73 (39%), Gaps = 7/73 (9%)
Query: 99 DVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
D+++ +DA + S + + S D FT LV ++++ V T
Sbjct: 79 DMKMTIDAMDLMASGRVTGFGLMSSDSDFTPLVTRIRQEGLPVYGFGTDK-----TPQAF 133
Query: 157 RRQADYFMDLAYL 169
R F+D+ L
Sbjct: 134 RSACTRFIDVGAL 146
>gi|290961181|ref|YP_003492363.1| hypothetical protein SCAB_68271 [Streptomyces scabiei 87.22]
gi|260650707|emb|CBG73823.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
Length = 407
Score = 42.8 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 30/147 (20%), Positives = 59/147 (40%), Gaps = 18/147 (12%)
Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78
+D+ L++ R RA ++R Y++ G P++ P H L + +V
Sbjct: 29 RITVDHAALIQGLRERAEADTERPLLRIYWF---DGAPDRVPQPEHRRLRVMP----RVT 81
Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136
++ T + GR K +D + + E + +V+ +GDG + A +
Sbjct: 82 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDVVLVTGDGDLLPGMMAAKEHG 139
Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162
V + + +D S+ L +AD
Sbjct: 140 VAVHLWAVQAADGDYNQSEDLVAEADE 166
>gi|325982853|ref|YP_004295255.1| hypothetical protein NAL212_2271 [Nitrosomonas sp. AL212]
gi|325532372|gb|ADZ27093.1| Domain of unknown function DUF88 [Nitrosomonas sp. AL212]
Length = 292
Score = 42.8 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 31/181 (17%), Positives = 57/181 (31%), Gaps = 29/181 (16%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
+P ++A+ ID N A+ LL Y GD S
Sbjct: 37 EPTLRLAVLIDADNAQAAV--------IESLLAEIARFGEATVKRIY----GDFTAHASA 84
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
+V+ K A + + K++ D L +DA + + + + +
Sbjct: 85 SWK----------KVLQKYAIKPVQQFAYTTGKNATDSALIIDAMDLLYTRKFDGFCLIT 134
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
D FT L L+ + +T++ D R F+ L++ + E
Sbjct: 135 SDSDFTGLAMRLREEG--LTVLGFGEKK---TPDAFRNACHKFVFTEILRSSPVSESAEP 189
Query: 181 K 181
Sbjct: 190 P 190
>gi|160935678|ref|ZP_02083053.1| hypothetical protein CLOBOL_00568 [Clostridium bolteae ATCC
BAA-613]
gi|158441422|gb|EDP19132.1| hypothetical protein CLOBOL_00568 [Clostridium bolteae ATCC
BAA-613]
Length = 308
Score = 42.8 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 31/173 (17%), Positives = 55/173 (31%), Gaps = 33/173 (19%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGD--PEQ 58
M + A+ ID N+ K +K + Y + GD +
Sbjct: 1 MEQNERRFAVLIDADNV------------SPKYIKYILDEVSDVGIATYKRIYGDWTDNE 48
Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHL 116
+ S + LLDW ++++ G+ D + +DA + S ++
Sbjct: 49 KRSWKNVLLDW--------SVNPIQQYSYTTGKNAT----DSAMIIDAMDILYSGNVDGF 96
Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
+ S D FT L L+ V + + R D F L +
Sbjct: 97 CLVSSDSDFTKLAQRLREAGMFVMGIGEQKTPKPF-----RAACDTFKLLEII 144
>gi|29832687|ref|NP_827321.1| hypothetical protein SAV_6145 [Streptomyces avermitilis MA-4680]
gi|29609807|dbj|BAC73856.1| hypothetical protein [Streptomyces avermitilis MA-4680]
Length = 408
Score = 42.4 bits (99), Expect = 0.023, Method: Composition-based stats.
Identities = 30/147 (20%), Positives = 59/147 (40%), Gaps = 18/147 (12%)
Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78
+D+ L++ R RA ++R Y++ G P++ P H L + +V
Sbjct: 32 RITVDHAALIQGLRERAEFDTERPLLRIYWF---DGAPDRVPQPEHRRLRVMP----RVT 84
Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136
++ T + GR K +D + + E + +V+ +GDG + A +
Sbjct: 85 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDVVLVTGDGDLLPGMMAAKEHG 142
Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162
V + + +D S+ L +AD
Sbjct: 143 VAVHLWAVQAADGDYNQSEDLVAEADE 169
>gi|77461998|ref|YP_351502.1| hypothetical protein RSP_1459 [Rhodobacter sphaeroides 2.4.1]
gi|126460888|ref|YP_001042002.1| hypothetical protein Rsph17029_0110 [Rhodobacter sphaeroides ATCC
17029]
gi|332559925|ref|ZP_08414247.1| hypothetical protein RSWS8N_12720 [Rhodobacter sphaeroides WS8N]
gi|77386416|gb|ABA77601.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1]
gi|126102552|gb|ABN75230.1| conserved hypothetical protein [Rhodobacter sphaeroides ATCC 17029]
gi|332277637|gb|EGJ22952.1| hypothetical protein RSWS8N_12720 [Rhodobacter sphaeroides WS8N]
Length = 248
Score = 42.4 bits (99), Expect = 0.023, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 8/85 (9%)
Query: 99 DVELAVDAF--EQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
D+ L + A S + V+ S D FT L A ++ + V + +
Sbjct: 78 DIGLVISAMDFLHSGLFDGFVLVSSDSDFTRLAARIREQGLDVYGIGEKK-----TPEAF 132
Query: 157 RRQADYFMDLAYLKNEIARDPDEDK 181
R F+ + L ++ E +
Sbjct: 133 RMACKRFIYVENLGSD-EPPAREPR 156
>gi|172039849|ref|YP_001799563.1| hypothetical protein cur_0169 [Corynebacterium urealyticum DSM
7109]
gi|171851153|emb|CAQ04129.1| hypothetical protein cu0169 [Corynebacterium urealyticum DSM 7109]
Length = 277
Score = 42.4 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 44/118 (37%), Gaps = 20/118 (16%)
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG---LEHLVIFS 120
P ++ L GF V AK +S +D ++ +D + L+ L++ S
Sbjct: 133 RPWVEALRNVGFAVFAKPKI---------TEESDVDADM-LDLIRRRHSEGILDGLIVAS 182
Query: 121 GDG-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
DG F + L I TV+ + L + F+DL + R+P
Sbjct: 183 ADGQNFRETLEELSE-----DIPVTVIGFREHVAWVLGNEKLRFVDLEDIPGVF-REP 234
>gi|332884085|gb|EGK04365.1| hypothetical protein HMPREF9456_01393 [Dysgonomonas mossii DSM
22836]
Length = 252
Score = 42.4 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 27/75 (36%), Gaps = 7/75 (9%)
Query: 99 DVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
D + +DA + ++ + S D FT L L+ +V + +
Sbjct: 78 DSAMIIDAMDILHGGRVDGFCLVSSDSDFTRLAVRLRESGMQVIGIGEKKTPSPFIV--- 134
Query: 157 RRQADYFMDLAYLKN 171
D F+ + +++
Sbjct: 135 --ACDKFIYIEIIRD 147
>gi|239987029|ref|ZP_04707693.1| hypothetical protein SrosN1_06957 [Streptomyces roseosporus NRRL
11379]
Length = 417
Score = 42.4 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 59/147 (40%), Gaps = 18/147 (12%)
Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78
+D+ L++ R RA ++R Y++ G P++ P H L + +V
Sbjct: 29 RITVDHAALIQGLRERAEADTQQPLLRIYWF---DGAPDRVPQPEHRRLRVMP----RVT 81
Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136
++ T + GR K +D + + E + +V+ +GDG + + +
Sbjct: 82 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDVVLVTGDGDLLPGLMSAKEHG 139
Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162
V + + +D S+ L +AD
Sbjct: 140 VAVHLWAVQAADGDYNQSEDLVAEADE 166
>gi|325928676|ref|ZP_08189851.1| hypothetical protein XPE_3939 [Xanthomonas perforans 91-118]
gi|325540954|gb|EGD12521.1| hypothetical protein XPE_3939 [Xanthomonas perforans 91-118]
Length = 280
Score = 42.4 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 28/172 (16%), Positives = 54/172 (31%), Gaps = 29/172 (16%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
+P ++IAL ID N + A D+ ++ + + + + + E
Sbjct: 6 NPDKRIALLIDADN----APAGKIDVVLAEVARYGVANVRRAYGNWKSPHLKGWEAALHD 61
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
+ ++F + G+ D+ + +DA + + L+ I S
Sbjct: 62 Y--------------AIRPIQQFAYSSGKNAS----DMAMVIDAMDLLYARNLDGFAIVS 103
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
D FT LV L KV + F + L +
Sbjct: 104 SDADFTPLVMRLLTDGMKVYGFGEKKTPAPFV-----NACSKFTYVEALGQQ 150
>gi|78049501|ref|YP_365676.1| hypothetical protein XCV3945 [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|78037931|emb|CAJ25676.1| conserved hypothetical protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 273
Score = 42.4 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 28/172 (16%), Positives = 54/172 (31%), Gaps = 29/172 (16%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
+P ++IAL ID N + A D+ ++ + + + + + E
Sbjct: 4 NPDKRIALLIDADN----APAGKIDVVLAEVARYGVANVRRAYGNWKSPHLKGWEAALHD 59
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
+ ++F + G+ D+ + +DA + + L+ I S
Sbjct: 60 Y--------------AIRPIQQFAYSSGKNAS----DMAMVIDAMDLLYARNLDGFAIVS 101
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
D FT LV L KV + F + L +
Sbjct: 102 SDADFTPLVMRLLTDGMKVYGFGEKKTPAPFV-----NACSKFTYVEALGQQ 148
>gi|326436666|gb|EGD82236.1| hypothetical protein PTSG_02907 [Salpingoeca sp. ATCC 50818]
Length = 341
Score = 42.4 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 8/74 (10%)
Query: 77 VVAKVAKEFTENCGRKRVKSSMDVELAVDAFE-QSEGLEHLVIFSGDGCFTTLVAALQR- 134
V ++ KE + V++ +DV++A + H+ F GDG F ++ AL+R
Sbjct: 114 VHSQPGKEVV-----RPVQAGVDVDIAAFLLTSLPPDVTHVYCFIGDGDFVPVIEALRRP 168
Query: 135 -KVKKVTIVSTVLS 147
K V +V +
Sbjct: 169 QFGKTVKLVLFSET 182
>gi|221640949|ref|YP_002527211.1| hypothetical protein RSKD131_2850 [Rhodobacter sphaeroides KD131]
gi|221161730|gb|ACM02710.1| Hypothetical Protein RSKD131_2850 [Rhodobacter sphaeroides KD131]
Length = 238
Score = 42.4 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 8/85 (9%)
Query: 99 DVELAVDAF--EQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
D+ L + A S + V+ S D FT L A ++ + V + +
Sbjct: 68 DIGLVISAMDFLHSGLFDGFVLVSSDSDFTRLAARIREQGLDVYGIGEKK-----TPEAF 122
Query: 157 RRQADYFMDLAYLKNEIARDPDEDK 181
R F+ + L ++ E +
Sbjct: 123 RMACKRFIYVENLGSD-EAPAREPR 146
>gi|172035458|ref|YP_001801959.1| hypothetical protein cce_0542 [Cyanothece sp. ATCC 51142]
gi|171696912|gb|ACB49893.1| hypothetical protein cce_0542 [Cyanothece sp. ATCC 51142]
Length = 235
Score = 42.4 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 26/178 (14%), Positives = 56/178 (31%), Gaps = 31/178 (17%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
++A+ ID N+ A+ LL+ A Q +
Sbjct: 12 RLAVLIDAENVSANI--------IEALLQEVAKYG---TANVKRIYGDWTSNQLNSWKGK 60
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124
L+ L + ++F G+ D L +DA + + + + S D
Sbjct: 61 LNKLA-------LQPIQQFRYTTGKNAT----DSALIIDAMDLLYTGNFDGFCLVSSDSD 109
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182
FT L + ++ ++ + + + F+ L ++ P ++K
Sbjct: 110 FTRLASRIRESG----LIVYGFGEKIKTPEAFVVACNKFIYTDILAHQ---QPSGNEK 160
>gi|256378342|ref|YP_003102002.1| hypothetical protein Amir_4302 [Actinosynnema mirum DSM 43827]
gi|255922645|gb|ACU38156.1| protein of unknown function DUF88 [Actinosynnema mirum DSM 43827]
Length = 281
Score = 42.4 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 59/189 (31%), Gaps = 54/189 (28%)
Query: 7 KIALFIDG------ANLYASS--KALGFDID--YRKLLKAFR-------SRAIVIRAYYY 49
+I +F DG ++ YA++ + +D + L ++ A+Y
Sbjct: 6 RIGVFYDGTWFAYLSDFYATTHPRRARVSLDGFHDALRWHVHLAEGVPLDDCVIREAHYV 65
Query: 50 TTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ 109
+ P + L G + + +DV A+
Sbjct: 66 RGRIETPAT------GFDEALALAGIT--------RHDLPLHGGKEKGVDVHFAL----- 106
Query: 110 SEGLEH--------LVIFSGDGCFTTLVAALQRKVKKVTI-VSTVLSDP-------SMAS 153
E + +V+ +GD FT L A L ++ +V + V+ P +
Sbjct: 107 -ETWDRAVTAGLRWVVLVTGDADFTPLAARLVKRGVRVLVPVADPRRAPQKWPENGPRTA 165
Query: 154 DQLR-RQAD 161
LR D
Sbjct: 166 APLRANATD 174
>gi|302542712|ref|ZP_07295054.1| conserved hypothetical protein [Streptomyces hygroscopicus ATCC
53653]
gi|302460330|gb|EFL23423.1| conserved hypothetical protein [Streptomyces himastatinicus ATCC
53653]
Length = 309
Score = 42.4 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 36/189 (19%), Positives = 65/189 (34%), Gaps = 37/189 (19%)
Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53
A+F+D +YA++ L F++D +++AF +A ++R Y++
Sbjct: 41 AIFVDAGYVYAAAGRLVAGTEDRRAFELDAEGIIEAFIDKARMIFPDSRLLRVYWFDGAR 100
Query: 54 GD---PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110
PEQQ P K N + +D + D +
Sbjct: 101 RRIHTPEQQSIAELP---------------DVKVRLGNLNANNQQKGVDSLIRSDLESLA 145
Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDL 166
+ V+ GD + V A Q +V + D ++ L + D DL
Sbjct: 146 RHRAIGDAVLIGGDEDLVSAVEAAQGYGARVHLWGIEALDGRNQAEPLLWEVDSQRTFDL 205
Query: 167 AYLKNEIAR 175
+ K + R
Sbjct: 206 DFCKPYVTR 214
>gi|85374093|ref|YP_458155.1| hypothetical protein ELI_06330 [Erythrobacter litoralis HTCC2594]
gi|84787176|gb|ABC63358.1| hypothetical protein ELI_06330 [Erythrobacter litoralis HTCC2594]
Length = 245
Score = 42.4 bits (99), Expect = 0.027, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 28/73 (38%), Gaps = 6/73 (8%)
Query: 99 DVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
D+ + +DA + ++ I S D FT LV L++ +V D
Sbjct: 78 DMAMTIDAIDLLYQGKVDGFGIMSSDSDFTPLVTRLRQDG----LVVYGFGSTKKTPDAF 133
Query: 157 RRQADYFMDLAYL 169
+ F+D+ L
Sbjct: 134 KSACTRFIDIDAL 146
>gi|294666413|ref|ZP_06731658.1| GCN5-related N-acetyltransferase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292603817|gb|EFF47223.1| GCN5-related N-acetyltransferase [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 276
Score = 42.4 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 36/207 (17%), Positives = 64/207 (30%), Gaps = 46/207 (22%)
Query: 8 IALFIDGANLYAS---SKALGFDID----YRKLLKAFRSRAIVIRAYYYTT-----VVGD 55
A++IDG NLY A + +D + +LL ++ Y+T
Sbjct: 49 TAVYIDGYNLYYGRIRGTAFKW-LDVVTLFDRLLHDQDPTTDLLHVRYFTASALGRFATH 107
Query: 56 PEQQFSPLHPLLDWLHY-NGFQVVAKVAKEFTENCG--------------------RKRV 94
+ L L + + + + K + G K
Sbjct: 108 KQASEIAQTTYLRALAHTHPQRFTTTLGKHSWDKGGTLLAEFVSGQPYDRTRRVRVWKLE 167
Query: 95 KSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-- 150
+ DV LA+ + + E LV+ S D +AA++ + + P
Sbjct: 168 EKQTDVNLALAMYRDAASGRYEQLVVCSNDSDIAPALAAIREDFPTIVLGMVTPRRPPVD 227
Query: 151 -----MASDQLRRQAD---YFMDLAYL 169
S L R AD +++ L
Sbjct: 228 GEADRRVSVSLSRCADWIRHYILDDEL 254
>gi|18978411|ref|NP_579768.1| hypothetical protein PF2039 [Pyrococcus furiosus DSM 3638]
gi|18894253|gb|AAL82163.1| hypothetical protein PF2039 [Pyrococcus furiosus DSM 3638]
Length = 162
Score = 42.4 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 30/173 (17%), Positives = 61/173 (35%), Gaps = 44/173 (25%)
Query: 8 IALFIDGANLYASSKALGFDI-----DYRKLLKAFRS-RAIVIRAYYYTTVVGDPEQQFS 61
I L IDG N+ L + D +K L+ R + Y
Sbjct: 26 IGLIIDGPNI------LRKEFKIRLEDIKKALEKIGKIRVAKVVLNQYAP---------- 69
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIF 119
L++ + GF+ + V DV +A++A E ++ L +
Sbjct: 70 --QGLIEAVVNQGFEPII--------------VAGDTDVRVAIEAMELIYNSDIDVLALA 113
Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
+ D F +++ +R+ K+ ++ + L+ ADY + + + +
Sbjct: 114 TRDADFLPIISEAKRRGKETVVIGVEPGF----AVALQNAADYVIIMEKREED 162
>gi|163815163|ref|ZP_02206544.1| hypothetical protein COPEUT_01321 [Coprococcus eutactus ATCC 27759]
gi|158449572|gb|EDP26567.1| hypothetical protein COPEUT_01321 [Coprococcus eutactus ATCC 27759]
Length = 322
Score = 42.4 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 25/154 (16%), Positives = 47/154 (30%), Gaps = 26/154 (16%)
Query: 49 YTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVA-------------------KEFTENC 89
Y ++ + + D L G V K+ + +
Sbjct: 12 YAILIDSENVSAKYIESIFDELSRLGSITVRKIYGDWSKNNNGWDKDCLLSYSIQPVQQF 71
Query: 90 GRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLS 147
K+S D + +DA + + ++ + + D FT L + L+ K+V + +
Sbjct: 72 SYTAGKNSTDSAMIIDAMDLLYTSNIDGFCLVTSDSDFTRLASRLREAGKQVIGMGERKT 131
Query: 148 DPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
+ S F L L NE P
Sbjct: 132 PKAFVS-----ACTSFKILDSLVNEDLNKPASKP 160
>gi|313681619|ref|YP_004059357.1| hypothetical protein Sulku_0490 [Sulfuricurvum kujiense DSM 16994]
gi|313154479|gb|ADR33157.1| protein of unknown function DUF88 [Sulfuricurvum kujiense DSM
16994]
Length = 246
Score = 42.4 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 29/172 (16%), Positives = 55/172 (31%), Gaps = 29/172 (16%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
M D + ++A+ ID N S ++ L+ + I Y +
Sbjct: 1 MIDDQARLAVLIDADN---SQPSI-----IAGLMDEIAAHGIASVKRIY------GDWTD 46
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118
+ L + L +G ++F G+ D + +DA + ++ + I
Sbjct: 47 TKLKGWKNALLEHG----LHPMQQFAYTTGKNAT----DSAMIIDAMDLLYTKNFDGFCI 98
Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
S D FT L + ++ KV D F+ L+
Sbjct: 99 VSSDSDFTRLASRIRESGIKVYGFGEQK-----TPKAFIGVCDKFIYTENLR 145
>gi|255280264|ref|ZP_05344819.1| conserved hypothetical protein [Bryantella formatexigens DSM 14469]
gi|255269355|gb|EET62560.1| conserved hypothetical protein [Bryantella formatexigens DSM 14469]
Length = 349
Score = 42.4 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 59/175 (33%), Gaps = 31/175 (17%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRK-LLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
M + E+ AL ID N+ S+K Y K +L V Y +
Sbjct: 1 MKENEERYALLIDADNV--SAK-------YIKPILDELSKYGNVTYKRIY------GDWT 45
Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLV 117
+ + L N ++++ G+ D + +DA + + ++
Sbjct: 46 STQHASWKEVLLQNSIS----PIQQYSYTQGKNAT----DSAMIIDAMDILYTGNVDGFC 97
Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
+ S D FT L + L+ + V + + R+ + F L L +
Sbjct: 98 LVSSDSDFTRLASRLRESGQNVIGMGEAKTPIPF-----RQACNIFTTLELLLED 147
>gi|297194912|ref|ZP_06912310.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
25486]
gi|197723066|gb|EDY66974.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
25486]
Length = 427
Score = 42.0 bits (98), Expect = 0.031, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 58/147 (39%), Gaps = 18/147 (12%)
Query: 25 GFDIDYRKLLKAFRS------RAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78
+D+ L++ R + ++R Y++ G P++ P H L + +V
Sbjct: 29 RITVDHASLIQGLRELAEADTQRPLLRIYWF---DGAPDRVPQPEHRRLRVMP----RVT 81
Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136
++ T + GR K +D + + E + +V+ +GDG + + +
Sbjct: 82 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDVVLVTGDGDLLPGLMSAKEHG 139
Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162
V + + +D S+ L +AD
Sbjct: 140 VAVHLWAVQAADGDYNQSEDLVAEADE 166
>gi|71905737|ref|YP_283324.1| hypothetical protein Daro_0095 [Dechloromonas aromatica RCB]
gi|71845358|gb|AAZ44854.1| Protein of unknown function DUF88 [Dechloromonas aromatica RCB]
Length = 273
Score = 42.0 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 26/160 (16%), Positives = 46/160 (28%), Gaps = 29/160 (18%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
++A+ ID N A+ LL A S +
Sbjct: 13 RLAVLIDADNAQATV--------IEGLLAEVARFGE---ATVKRIYGDFTSPSSSQWKKV 61
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124
L+ Q K ++F G+ D + +DA + + + + S D
Sbjct: 62 LN-------QHAIKPVQQFAYTTGKNAT----DSTMIIDAMDLLYTRRFDGFCLVSSDSD 110
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
FT L ++ + V + D R F+
Sbjct: 111 FTGLALRIREEGLTV-----LGFGEEKTPDAFRNACHKFI 145
>gi|257387927|ref|YP_003177700.1| hypothetical protein Hmuk_1879 [Halomicrobium mukohataei DSM 12286]
gi|257170234|gb|ACV47993.1| protein of unknown function DUF88 [Halomicrobium mukohataei DSM
12286]
Length = 152
Score = 42.0 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 28/159 (17%), Positives = 53/159 (33%), Gaps = 31/159 (19%)
Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
++ +F+DG N+ FD+D + + + + Y
Sbjct: 15 SEPRVGVFVDGPNV----LRSEFDVDLDDVREEAENWGRLAITRLYV--------DEHAT 62
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVI--FSG 121
L+ GF+VV +DV+LAVDA ++ S
Sbjct: 63 PGLIQAAEARGFEVVV--------------TSGDVDVKLAVDATAAGADDAIDLLAIVSR 108
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160
D F ++ ++ + + ++ + SD LR A
Sbjct: 109 DTDFKPVLESVGERG--IETLAIAPGEHGR-SDALRNAA 144
>gi|326779887|ref|ZP_08239152.1| Domain of unknown function DUF88 protein [Streptomyces cf. griseus
XylebKG-1]
gi|326660220|gb|EGE45066.1| Domain of unknown function DUF88 protein [Streptomyces cf. griseus
XylebKG-1]
Length = 418
Score = 42.0 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 59/147 (40%), Gaps = 18/147 (12%)
Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78
+D+ L++ R RA ++R Y++ G P++ P H L + +V
Sbjct: 29 RITVDHAALIQGLRERAEADTQQPLLRIYWF---DGAPDRVPQPEHRRLRVMP----RVT 81
Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136
++ T + GR K +D + + E + +V+ +GDG + + +
Sbjct: 82 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDVVLVTGDGDLLPGLMSAKEHG 139
Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162
V + + +D S+ L +AD
Sbjct: 140 VAVHLWAVQAADGDYNQSEDLVAEADE 166
>gi|120552973|ref|YP_957324.1| hypothetical protein Maqu_0029 [Marinobacter aquaeolei VT8]
gi|120322822|gb|ABM17137.1| conserved hypothetical protein [Marinobacter aquaeolei VT8]
Length = 271
Score = 42.0 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 5/42 (11%), Positives = 19/42 (45%)
Query: 97 SMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKK 138
M + + + + + ++ +++ +GD F +R+ +
Sbjct: 194 DMRIGIDIASLTLKQQVDTIILVAGDSDFVPAAKMARREGIE 235
>gi|323698514|ref|ZP_08110426.1| hypothetical protein DND132_1098 [Desulfovibrio sp. ND132]
gi|323458446|gb|EGB14311.1| hypothetical protein DND132_1098 [Desulfovibrio desulfuricans
ND132]
Length = 241
Score = 42.0 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 50/168 (29%), Gaps = 29/168 (17%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
+ IALFID N A +K + F +L + Y +
Sbjct: 5 SDEQHIALFIDADN--APAKFIEF------ILTDLAKYGSLAIRRAYGNWKNE------- 49
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLV--IFS 120
L F + ++F G+ D+ + +DA + + V + S
Sbjct: 50 ---YLKGWEECLFDKAIQPVQQFDMTKGKNAT----DMAMTIDAMDILYQKDIGVFGLVS 102
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
D F L L+ + K V + + + F L
Sbjct: 103 SDCDFAPLATRLRAEGKTVVGYGSRQTPEAFT-----NACSTFSYLDD 145
>gi|242209571|ref|XP_002470632.1| predicted protein [Postia placenta Mad-698-R]
gi|220730311|gb|EED84170.1| predicted protein [Postia placenta Mad-698-R]
Length = 456
Score = 42.0 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 15/114 (13%), Positives = 38/114 (33%), Gaps = 16/114 (14%)
Query: 34 LKAFRSRAIVIRAY-YYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRK 92
+ R ++++ Y+ + P + L L G V+ +
Sbjct: 31 IAQLARRYGSVKSFRAYSELPEQPSPKNIALRS---DLQLCGVSVIDCPHNGGKDVA--- 84
Query: 93 RVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS 143
D + VD + +++ +GD F V+ L + ++ +++
Sbjct: 85 ------DKMMIVDMMAFAIDTPAPATIILITGDRDFVYAVSILSLRQYRLVVLA 132
>gi|194291074|ref|YP_002006981.1| hypothetical protein RALTA_A2999 [Cupriavidus taiwanensis LMG
19424]
gi|193224909|emb|CAQ70920.1| conserved hypothetical protein [Cupriavidus taiwanensis LMG 19424]
Length = 426
Score = 42.0 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 14/77 (18%), Positives = 28/77 (36%), Gaps = 7/77 (9%)
Query: 99 DVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
D + +DA + + + I S D FT L + ++ + V + +
Sbjct: 81 DSAMIIDAMDLLYTGRFDGFCIVSSDSDFTRLASRIREQGLTVYGFGERKTPKPFVT--- 137
Query: 157 RRQADYFMDLAYLKNEI 173
D F+ L+ E+
Sbjct: 138 --ACDKFIYSDVLRAEV 152
>gi|14590027|ref|NP_142091.1| hypothetical protein PH0073 [Pyrococcus horikoshii OT3]
gi|3256459|dbj|BAA29142.1| 195aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 195
Score = 42.0 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 34/168 (20%), Positives = 66/168 (39%), Gaps = 32/168 (19%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
++IAL +DG N+ K LG + +++A S + A Q++P
Sbjct: 29 KRIALLVDGPNILR--KELGVHL--EDIVEALSSLGNIRVAKVIL-------NQYAP-QS 76
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDG 123
L++ + GF+ V V + V+LAV+A + ++ + + + +
Sbjct: 77 LIEAVSNQGFEPVI--------------VAGEIGVKLAVEAMREVYNPNIDIIALATRNT 122
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
F ++ + K K+ I+ S L+ ADY + L
Sbjct: 123 EFVPIILKAKEKGKETAIIGVEPGF----SSALKHAADYVIVLESRGE 166
>gi|325960103|ref|YP_004291569.1| hypothetical protein Metbo_2384 [Methanobacterium sp. AL-21]
gi|325331535|gb|ADZ10597.1| protein of unknown function DUF88 [Methanobacterium sp. AL-21]
Length = 165
Score = 42.0 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 28/166 (16%), Positives = 61/166 (36%), Gaps = 32/166 (19%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
+ I L +DG N+ L + D ++ + V Q++
Sbjct: 21 SQGKNIGLLVDGPNM------LRKEFD-----CDLEIVRDLMLEHGNVKVGKVFLNQYAS 69
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFS 120
L++ + GF + V DV++A++AFE ++ + + +
Sbjct: 70 D-KLIEAVVNQGFSPMI--------------VSGETDVQMAIEAFELIHNPNIDIIALMT 114
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
D F L+ + K+ ++ ++P ++ L+ AD + L
Sbjct: 115 RDVDFFPLINVAKENGKQTIVIG---AEPGFSA-ALKNSADDTITL 156
>gi|308177196|ref|YP_003916602.1| hypothetical protein AARI_14200 [Arthrobacter arilaitensis Re117]
gi|307744659|emb|CBT75631.1| hypothetical protein AARI_14200 [Arthrobacter arilaitensis Re117]
Length = 335
Score = 42.0 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 29/76 (38%), Gaps = 7/76 (9%)
Query: 96 SSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM-- 151
+D+ LA+D + + SGD V Q KV ++ SD +
Sbjct: 95 KGVDLRLALDLVGVARNRSASIAYLVSGDDDLAEAVEEAQDLGMKVVLLGVAKSDSRLGV 154
Query: 152 --ASDQLRRQADYFMD 165
++ L AD +++
Sbjct: 155 ASVAEHLALTAD-YIE 169
>gi|262375022|ref|ZP_06068256.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
gi|262310035|gb|EEY91164.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
Length = 269
Score = 42.0 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 30/73 (41%), Gaps = 7/73 (9%)
Query: 99 DVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
D+ L +DA + + L+ I S D FT L + ++ +T+ +
Sbjct: 79 DMILIIDAMDLLYAGALDGFCIVSSDSDFTPLASRIRENG--LTVYGFGKKA---TPEAF 133
Query: 157 RRQADYFMDLAYL 169
++ D F+ + L
Sbjct: 134 KKACDKFIYIENL 146
>gi|126734452|ref|ZP_01750199.1| hypothetical protein RCCS2_09834 [Roseobacter sp. CCS2]
gi|126717318|gb|EBA14182.1| hypothetical protein RCCS2_09834 [Roseobacter sp. CCS2]
Length = 213
Score = 42.0 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 27/176 (15%), Positives = 51/176 (28%), Gaps = 26/176 (14%)
Query: 7 KIALFIDGANLYASSK---ALGFDIDYRKLLKAFRSRAIVIRAYYY----TTVVGDPEQQ 59
++ +++DG NLY + D + L VI Y +
Sbjct: 2 RVRVYVDGFNLYYRLLKHSRYKWT-DLKLLSSELLQTGDVIERIRYFTADVSPRAGDPDA 60
Query: 60 FSPLHPLLDWLHYNG----------FQVVAKVAKEFTEN--CGRKRVKSSMDVELAVDAF 107
+ L + + + + E+ R + DV LA
Sbjct: 61 PTRQQAYFRALRTIPELEIHKGTFLAKTIHRPVRGQEESYVYVRDTEEKGSDVNLASHLL 120
Query: 108 E--QSEGLEHLVIFSGDGCFTTLVAAL-QRKVKKVTIVSTVLSDPSMASDQLRRQA 160
+ + ++ S D + + Q K V + + P S LR+ A
Sbjct: 121 MDGFCDTYDIALVMSQDTDLLEPIRMVSQELGKVVIVAWFEDTSP---SKLLRQYA 173
>gi|329940919|ref|ZP_08290199.1| hypothetical protein SGM_5691 [Streptomyces griseoaurantiacus M045]
gi|329300213|gb|EGG44111.1| hypothetical protein SGM_5691 [Streptomyces griseoaurantiacus M045]
Length = 406
Score = 42.0 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 30/147 (20%), Positives = 59/147 (40%), Gaps = 18/147 (12%)
Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78
+D+ L++ R RA ++R Y++ G P++ P H L + +V
Sbjct: 32 RITVDHAALIQGLRERAESDTRQPLLRIYWF---DGAPDRVPQPEHRRLRVMP----RVT 84
Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136
++ T + GR K +D + + E + +V+ +GDG + A +
Sbjct: 85 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDVVLITGDGDLLPGMMAAKEHG 142
Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162
V + + +D S+ L +AD
Sbjct: 143 VAVHLWAVQAADGDYNQSEDLVAEADE 169
>gi|119356715|ref|YP_911359.1| hypothetical protein Cpha266_0887 [Chlorobium phaeobacteroides DSM
266]
gi|119354064|gb|ABL64935.1| conserved hypothetical protein [Chlorobium phaeobacteroides DSM
266]
Length = 136
Score = 42.0 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 44/136 (32%), Gaps = 23/136 (16%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLL-------KAFRSRAIVIRAYYYTTVVGDPE 57
+E++ +++DG NLY G DY K L + ++ Y+T+ V D
Sbjct: 11 KERVHVYVDGFNLYFGMLEAG--FDYCKWLNLKLLATNLLKPNQELVCVKYFTSRVSDNP 68
Query: 58 QQFSPLHPLLDWLHYN------GFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE 111
+ ++ L G + + N + DV +A S
Sbjct: 69 DKQKRQTTYIEALESERVHILYGHYQRNPIECKRCGNIWASYNEKMTDVNIA---MSLSG 125
Query: 112 GLEHLVIFSGDGCFTT 127
+ H G F
Sbjct: 126 RVRH-----GHADFRR 136
>gi|302692518|ref|XP_003035938.1| hypothetical protein SCHCODRAFT_105540 [Schizophyllum commune H4-8]
gi|300109634|gb|EFJ01036.1| hypothetical protein SCHCODRAFT_105540 [Schizophyllum commune H4-8]
Length = 710
Score = 42.0 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 10/73 (13%)
Query: 98 MDVELAVDAFEQSEGLEH-----LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMA 152
+D L D + L+H +V+ SGD F + + L+R++ V ++ P
Sbjct: 79 VDQMLQTDMLVFA--LDHPAPATIVLISGDRDFAYVASILRRRMYNVVLICHSTPGPH-- 134
Query: 153 SDQLRRQADYFMD 165
L +Q +D
Sbjct: 135 -KSLLQQVSTHID 146
>gi|149184574|ref|ZP_01862892.1| hypothetical protein ED21_27688 [Erythrobacter sp. SD-21]
gi|148831894|gb|EDL50327.1| hypothetical protein ED21_27688 [Erythrobacter sp. SD-21]
Length = 241
Score = 42.0 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 34/176 (19%), Positives = 53/176 (30%), Gaps = 28/176 (15%)
Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
IAL ID N ID +L V Y Q +
Sbjct: 9 IALLIDADN------TTPRGIDP--VLTVMAELGQVNIKRAYGNFTKKNLQGWDKYSHKF 60
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCF 125
L Y F + K++ D+ + +DA + ++ I S D F
Sbjct: 61 GILPYQQFDMTT--------------GKNATDMAMTIDAIDLLYQGKVDGFGIMSSDSDF 106
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
T L L++ ++ S D + F+D+ L A +P K
Sbjct: 107 TPLATRLRQDG----LIVYGFGSKSKTPDAFKSACTRFIDIDALIAGAADEPAPSK 158
>gi|119472307|ref|ZP_01614467.1| hypothetical protein ATW7_14156 [Alteromonadales bacterium TW-7]
gi|119445029|gb|EAW26325.1| hypothetical protein ATW7_14156 [Alteromonadales bacterium TW-7]
Length = 227
Score = 42.0 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 48/140 (34%), Gaps = 34/140 (24%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAI-VIRAYYYTTVVGDPEQQFSPLH 64
+K ALFID N+ K ++ ++ + Y L
Sbjct: 5 KKTALFIDAENISH------------KYIEQIMAKFEHIEVKKAYGNFGA------VQLK 46
Query: 65 PLLDWLHYNGFQVV--AKVAKEFTENCGRKRVKSSM-DVELAVDAFE--QSEGLEHLVIF 119
P ++ ++V K+ K KS+ D+ L V E ++ I
Sbjct: 47 PWVNICSRFAIEMVYQEKLVK----------SKSNAADIALTVGVMESLYVSPIDTFAIA 96
Query: 120 SGDGCFTTLVAALQRKVKKV 139
S D F LV L+R KKV
Sbjct: 97 SSDSDFAALVHFLRRNGKKV 116
>gi|182439235|ref|YP_001826954.1| hypothetical protein SGR_5442 [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|178467751|dbj|BAG22271.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
NBRC 13350]
Length = 421
Score = 41.7 bits (97), Expect = 0.040, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 59/147 (40%), Gaps = 18/147 (12%)
Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78
+D+ L++ R RA ++R Y++ G P++ P H L + +V
Sbjct: 32 RITVDHAALIQGLRERAEADTQQPLLRIYWF---DGAPDRVPQPEHRRLRVMP----RVT 84
Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136
++ T + GR K +D + + E + +V+ +GDG + + +
Sbjct: 85 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDVVLVTGDGDLLPGLMSAKEHG 142
Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162
V + + +D S+ L +AD
Sbjct: 143 VAVHLWAVQAADGDYNQSEDLVAEADE 169
>gi|126656067|ref|ZP_01727451.1| hypothetical protein CY0110_03254 [Cyanothece sp. CCY0110]
gi|126622347|gb|EAZ93053.1| hypothetical protein CY0110_03254 [Cyanothece sp. CCY0110]
Length = 235
Score = 41.7 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 23/160 (14%), Positives = 48/160 (30%), Gaps = 28/160 (17%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
++A+ ID N+ A+ LL+ A Q +
Sbjct: 12 RLAVLIDAENVSANI--------IEPLLQEVAKYG---TANVKRIYGDWTSNQLNSWKSK 60
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124
L+ L + ++F G+ D L +DA + + + + S D
Sbjct: 61 LNKLA-------LQPIQQFRYTTGKNAT----DSALIIDAMDLLYTNNFDGFCLVSSDSD 109
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
FT L + ++ ++ + + F+
Sbjct: 110 FTRLASRIRESG----LIVYGFGEKIKTPEAFVVACSKFI 145
>gi|77458643|ref|YP_348149.1| hypothetical protein Pfl01_2418 [Pseudomonas fluorescens Pf0-1]
gi|77382646|gb|ABA74159.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
Length = 247
Score = 41.7 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Query: 86 TENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVK 137
T+ R K +D+ + VD S + ++ +V+ +GD F +R+
Sbjct: 149 TDVSIETRQKG-VDMRIGVDVASLSFKQQVDQIVLIAGDADFVPAAKMARREGV 201
>gi|307824274|ref|ZP_07654500.1| protein of unknown function DUF88 [Methylobacter tundripaludum
SV96]
gi|307734654|gb|EFO05505.1| protein of unknown function DUF88 [Methylobacter tundripaludum
SV96]
Length = 276
Score = 41.7 bits (97), Expect = 0.045, Method: Composition-based stats.
Identities = 34/172 (19%), Positives = 58/172 (33%), Gaps = 29/172 (16%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
+ ++ AL ID N A +KA ID AI+ A Y V
Sbjct: 4 NENKRFALLIDADN--AQAKA----ID-----------AILTEAARYGDVTSRRCYGDWT 46
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
L W V+ K A + + K++ D L +DA + + + S
Sbjct: 47 HTRLGSWKS-----VLNKHAIQPMQQFAYTSGKNATDSALIIDAMDLLYTGKFNGFFLVS 101
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
D FT L L+ +V + + + R + F+ + ++
Sbjct: 102 SDSDFTKLATRLREAGLEV-----IGIGKRLTPEAFRAACNKFIFTETIMDD 148
>gi|269957712|ref|YP_003327501.1| hypothetical protein Xcel_2936 [Xylanimonas cellulosilytica DSM
15894]
gi|269306393|gb|ACZ31943.1| conserved hypothetical protein [Xylanimonas cellulosilytica DSM
15894]
Length = 186
Score = 41.7 bits (97), Expect = 0.046, Method: Composition-based stats.
Identities = 27/157 (17%), Positives = 55/157 (35%), Gaps = 35/157 (22%)
Query: 3 DPREKIALFIDGANLYASSKALGFDI-------DYRKLLKAFRS------RAIVIRAYYY 49
+ K L +DG N+ A+ LG ++ D R + V+ ++
Sbjct: 1 MSQRKTYLLVDGENIDAT---LGMNVLGRRPNPDERPRWDRITAFAAQVWGQDVVPLFFL 57
Query: 50 TTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVEL--AVDAF 107
G P + L G++ + + +D+ + +DA
Sbjct: 58 NATSG------QMPMPFVQALLAMGYRPI---------PLAGSATEKVVDIGIQRTLDAL 102
Query: 108 EQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVST 144
+E +++ S DG F + AL +KV +++
Sbjct: 103 --AERDGDVLLASHDGDFLPQIEALLGSDRKVGLLAF 137
>gi|227542867|ref|ZP_03972916.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
ATCC 51866]
gi|227181372|gb|EEI62344.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
ATCC 51866]
Length = 182
Score = 41.7 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 10/63 (15%), Positives = 24/63 (38%), Gaps = 4/63 (6%)
Query: 76 QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQ 133
++ K E + K +D+ + +D ++ + +V+ +GD F +
Sbjct: 58 KIQVKDLTE-DDFSLDINQKG-VDMRIGLDIASLAQQGIVNQIVMITGDSDFVPAAKHAR 115
Query: 134 RKV 136
R
Sbjct: 116 RMG 118
>gi|325918809|ref|ZP_08180894.1| hypothetical protein XVE_4927 [Xanthomonas vesicatoria ATCC 35937]
gi|325534983|gb|EGD06894.1| hypothetical protein XVE_4927 [Xanthomonas vesicatoria ATCC 35937]
Length = 247
Score = 41.7 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 32/187 (17%), Positives = 61/187 (32%), Gaps = 35/187 (18%)
Query: 8 IALFIDGANLYAS---SKALGFDID----YRKLLKAFRSRAIVIRAYYYTTVV----GDP 56
A++IDG NLY A + +D + +LL ++ Y+T
Sbjct: 21 TAVYIDGYNLYYGRIRGTAFKW-LDVVALFDRLLHDQDPTTDLLHVRYFTAPALGRFATH 79
Query: 57 EQQFSPLHPLLDWLHY-NGFQVVAKVAKEFTENCG--------------------RKRVK 95
+Q L L + + + + K + G K +
Sbjct: 80 KQASETQAAYLRALAHTHPQRFTTTLGKHSWDKGGTLLPEFVSGQPYDRARRVRVWKLEE 139
Query: 96 SSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMAS 153
DV LA+ + + + LV+ S D + A++ V + +P +
Sbjct: 140 KQTDVNLALTMYRDAASARYQQLVVCSNDSDIEPALVAIREDFPSVVLGVVTPRNPPVDG 199
Query: 154 DQLRRQA 160
+ RR +
Sbjct: 200 ESDRRVS 206
>gi|282897247|ref|ZP_06305249.1| hypothetical protein CRD_02171 [Raphidiopsis brookii D9]
gi|281197899|gb|EFA72793.1| hypothetical protein CRD_02171 [Raphidiopsis brookii D9]
Length = 128
Score = 41.7 bits (97), Expect = 0.051, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 51/138 (36%), Gaps = 29/138 (21%)
Query: 8 IALFIDGANLYASSKALGFDID----------YRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
A+ D NL +K F D YR++L+ + Y +
Sbjct: 6 TAILYDIENL---TKGYSFSKDFIKELSLKQIYRQILEVDIVN-KICLQRAYA---NWSD 58
Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114
+ S L ++ L + Q+ R K++ D++L VD + + +E
Sbjct: 59 HRLSLLRGEINELGIDPIQIF---------GFARYHKKNAADIQLVVDTMDITIRFPHIE 109
Query: 115 HLVIFSGDGCFTTLVAAL 132
VI SGDG F +L L
Sbjct: 110 VYVIVSGDGGFASLAKKL 127
>gi|152992773|ref|YP_001358494.1| hypothetical protein SUN_1182 [Sulfurovum sp. NBC37-1]
gi|151424634|dbj|BAF72137.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 249
Score = 41.7 bits (97), Expect = 0.051, Method: Composition-based stats.
Identities = 27/167 (16%), Positives = 52/167 (31%), Gaps = 31/167 (18%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
M + IALFID N+ +++ ++ +V Y D
Sbjct: 1 MTKKEDHIALFIDCDNISH--RSI------EGIINELSKYGVVNIRQAYGNWTKDN---- 48
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSM-DVELAVDAFEQSEG--LEHLV 117
L D L + K ++F + D+ + +DA + ++
Sbjct: 49 --LKNWEDKLL----EFAIKPIQQF-----DYSKNKNATDILMTIDAIDLLHTKDIDAFA 97
Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
+ D FT +V +Q + KV + + F+
Sbjct: 98 FATSDSDFTPVVMRVQAEGIKVFGFGEKKTPKPFMA-----ACSQFI 139
>gi|91793924|ref|YP_563575.1| NAD(+) kinase [Shewanella denitrificans OS217]
gi|123356621|sp|Q12L24|PPNK_SHEDO RecName: Full=Probable inorganic polyphosphate/ATP-NAD kinase;
Short=Poly(P)/ATP NAD kinase
gi|91715926|gb|ABE55852.1| NAD(+) kinase [Shewanella denitrificans OS217]
Length = 309
Score = 41.7 bits (97), Expect = 0.052, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 32/96 (33%), Gaps = 17/96 (17%)
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVEL-AVDAFEQSEGLEHLVIF 119
+ L WL G+ V+ +RV + +++E AVD E E + ++
Sbjct: 38 QTIEKLHLWLTAQGYTVLV-----------EERVSAELEIEFQAVDLVEIGERCDLAIVV 86
Query: 120 SGDGCFTTLVAALQR-----KVKKVTIVSTVLSDPS 150
GDG L R + + P
Sbjct: 87 GGDGNMLGAARVLARYDVAVIGVNRGNLGFLTDLPP 122
>gi|218768924|ref|YP_002343436.1| hypothetical protein NMA2192 [Neisseria meningitidis Z2491]
gi|6900422|emb|CAB72032.1| hypothetical protein [Neisseria meningitidis]
gi|121052932|emb|CAM09286.1| conserved hypothetical protein [Neisseria meningitidis Z2491]
gi|254671541|emb|CBA09160.1| conserved hypothetical protein [Neisseria meningitidis alpha153]
gi|254672832|emb|CBA07007.1| conserved hypothetical protein [Neisseria meningitidis alpha275]
gi|308388512|gb|ADO30832.1| hypothetical protein NMBB_0327 [Neisseria meningitidis alpha710]
gi|319411222|emb|CBY91629.1| conserved hypothetical protein [Neisseria meningitidis WUE 2594]
gi|325131019|gb|EGC53746.1| hypothetical protein NMBOX9930304_0283 [Neisseria meningitidis
OX99.30304]
gi|325131640|gb|EGC54346.1| gp9, Cpp15 [Neisseria meningitidis M6190]
gi|325137119|gb|EGC59715.1| gp9, Cpp15 [Neisseria meningitidis M0579]
gi|325139012|gb|EGC61559.1| hypothetical protein NMBES14902_0278 [Neisseria meningitidis
ES14902]
gi|325199009|gb|ADY94465.1| hypothetical protein NMBG2136_1806 [Neisseria meningitidis G2136]
gi|325202880|gb|ADY98334.1| hypothetical protein NMBM01240149_1792 [Neisseria meningitidis
M01-240149]
gi|325207321|gb|ADZ02773.1| conserved hypothetical protein [Neisseria meningitidis NZ-05/33]
Length = 219
Score = 41.7 bits (97), Expect = 0.052, Method: Composition-based stats.
Identities = 9/51 (17%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Query: 87 ENCGRKRVKS-SMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKV 136
+ + K M + L + + + + +++FSGD F +R+
Sbjct: 139 DVVLDVKQKGVDMRIGLDISSITLKKQADKIILFSGDSDFVPAAKLARREG 189
>gi|313904540|ref|ZP_07837916.1| protein of unknown function DUF88 [Eubacterium cellulosolvens 6]
gi|313470682|gb|EFR66008.1| protein of unknown function DUF88 [Eubacterium cellulosolvens 6]
Length = 283
Score = 41.3 bits (96), Expect = 0.053, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 31/79 (39%), Gaps = 7/79 (8%)
Query: 99 DVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
D + +DA + S ++ I S D FT LVA L+ KV + + S
Sbjct: 76 DSAMIIDAMDILYSNTVDGFCIVSSDSDFTRLVARLREAGHKVIGMGESKTPQPFIS--- 132
Query: 157 RRQADYFMDLAYLKNEIAR 175
+ F L L ++ +
Sbjct: 133 --ACNQFKYLDMLYDQRQQ 149
>gi|146276115|ref|YP_001166274.1| hypothetical protein Rsph17025_0057 [Rhodobacter sphaeroides ATCC
17025]
gi|145554356|gb|ABP68969.1| hypothetical protein Rsph17025_0057 [Rhodobacter sphaeroides ATCC
17025]
Length = 246
Score = 41.3 bits (96), Expect = 0.053, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 28/76 (36%), Gaps = 7/76 (9%)
Query: 99 DVELAVDAF--EQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
D+ L + A S + V+ S D FT L A ++ + V + +
Sbjct: 78 DIGLVIAAMDFLHSGLFDGFVLVSSDSDFTRLAARIREQGLDVYGIGEKK-----TPEAF 132
Query: 157 RRQADYFMDLAYLKNE 172
R F+ + L ++
Sbjct: 133 RMACKRFIYVENLGSD 148
>gi|313159517|gb|EFR58880.1| conserved hypothetical protein [Alistipes sp. HGB5]
Length = 186
Score = 41.3 bits (96), Expect = 0.054, Method: Composition-based stats.
Identities = 19/154 (12%), Positives = 47/154 (30%), Gaps = 19/154 (12%)
Query: 24 LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAK 83
+ + + LL V+ + + ++ GFQV
Sbjct: 43 YSWRLSFGNLLNKVSEGKKVVSTLLVGSRPPKNDSLWTSAKK-------QGFQVSV---- 91
Query: 84 EFTENCGRKRVKSSMDVELA---VDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVT 140
+ + + K+ +D ++ L++ SGD F L+ +
Sbjct: 92 --FDRNTQGKEKA-VDAQIVAQGTKMICTHPNKGVLILLSGDSDFIPLLEICNELGWESE 148
Query: 141 IVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
I + + P + ++ + L + ++I
Sbjct: 149 IWAFKSALP--CAKKMIQYVTRVNYLDSIFSDIG 180
>gi|294626535|ref|ZP_06705134.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|294665102|ref|ZP_06730406.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292599225|gb|EFF43363.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292605144|gb|EFF48491.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 270
Score = 41.3 bits (96), Expect = 0.055, Method: Composition-based stats.
Identities = 28/172 (16%), Positives = 54/172 (31%), Gaps = 29/172 (16%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
+P ++IAL ID N + A D+ ++ + + + + + E
Sbjct: 6 NPDKRIALLIDADN----APAGKIDVVLAEVARYGVANVRRAYGNWKSPHLKGWEAALHD 61
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
+ ++F + G+ D+ + +DA + + L+ I S
Sbjct: 62 Y--------------AIRPIQQFAYSSGKNAS----DMAMVIDAMDLLYARNLDGFAIVS 103
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
D FT LV L KV + F + L +
Sbjct: 104 SDADFTPLVMRLLTDGMKVYGFGEKKTPAPFV-----NACSKFTYVEALGQQ 150
>gi|325264389|ref|ZP_08131120.1| hypothetical protein HMPREF0240_03396 [Clostridium sp. D5]
gi|324030460|gb|EGB91744.1| hypothetical protein HMPREF0240_03396 [Clostridium sp. D5]
Length = 321
Score = 41.3 bits (96), Expect = 0.055, Method: Composition-based stats.
Identities = 41/174 (23%), Positives = 66/174 (37%), Gaps = 29/174 (16%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRK-LLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
+K AL ID N+ S+K Y K +L V Y + GD ++
Sbjct: 3 DKYALLIDADNV--SAK-------YIKPILDELSKYGNVT----YKRIYGDWTSTYNS-- 47
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
+ L N ++F+ G+ S+M ++ A+D SE LE + S D
Sbjct: 48 SWKEELLQNSIT----PIQQFSYTHGKNATDSAMIID-AMDMLYTSE-LEGFCLVSSDSD 101
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE--IARD 176
FT L + L+ K V + + R+ D F L L + I ++
Sbjct: 102 FTKLASRLRESGKTVIGMGEDKTPAPF-----RKACDIFTVLELLLEDNTIEKE 150
>gi|73542916|ref|YP_297436.1| hypothetical protein Reut_A3232 [Ralstonia eutropha JMP134]
gi|72120329|gb|AAZ62592.1| conserved hypothetical protein [Ralstonia eutropha JMP134]
Length = 419
Score = 41.3 bits (96), Expect = 0.055, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 28/78 (35%), Gaps = 7/78 (8%)
Query: 99 DVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
D + +DA + +E + + S D FT L + ++ + V + +
Sbjct: 81 DSAMIIDAMDLLYTERFDGFCLVSSDSDFTRLASRIREQGLIVYGFGERKTPKPFVT--- 137
Query: 157 RRQADYFMDLAYLKNEIA 174
D F+ L+ +
Sbjct: 138 --ACDKFIYSDVLRADAE 153
>gi|239916658|ref|YP_002956216.1| Protein of unknown function DUF88 [Micrococcus luteus NCTC 2665]
gi|281414886|ref|ZP_06246628.1| hypothetical protein MlutN2_06748 [Micrococcus luteus NCTC 2665]
gi|289706971|ref|ZP_06503306.1| conserved hypothetical protein [Micrococcus luteus SK58]
gi|239837865|gb|ACS29662.1| Protein of unknown function DUF88 [Micrococcus luteus NCTC 2665]
gi|289556296|gb|EFD49652.1| conserved hypothetical protein [Micrococcus luteus SK58]
Length = 182
Score = 41.3 bits (96), Expect = 0.056, Method: Composition-based stats.
Identities = 34/170 (20%), Positives = 59/170 (34%), Gaps = 32/170 (18%)
Query: 10 LFIDGANLYAS------SKALGFDIDYR--KLLKAFRSRAIV-IRAYYYTTVVGDPEQQF 60
L IDG N+ A+ + D R +LL R ++ ++ + G+
Sbjct: 8 LLIDGENIDATLGTSILQRRPQPDERPRWKRLLGYLEDRWDQPVKGLFFLAIDGEIP--- 64
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
P + L GFQ + G +V +D+ + A + +V+ S
Sbjct: 65 ---IPFVQALTALGFQPIML--------RGEGKV---VDIGIQRTAEALLGREDDVVLVS 110
Query: 121 GDGCFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQAD-YFMDLAY 168
D F + L ++ I+ S +LRR F DL +
Sbjct: 111 HDADFAPQLTDLAATPGRRTGIMGF----EEFLSHELRRIPGVEFFDLEH 156
>gi|326802048|ref|YP_004319867.1| hypothetical protein Sph21_4688 [Sphingobacterium sp. 21]
gi|326552812|gb|ADZ81197.1| Domain of unknown function DUF88 [Sphingobacterium sp. 21]
Length = 272
Score = 41.3 bits (96), Expect = 0.058, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 28/73 (38%), Gaps = 7/73 (9%)
Query: 99 DVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
D L +DA + ++ ++ I S D FT L L+ K V + + +
Sbjct: 81 DSALIIDAMDILHTQKVDGFCIVSSDSDFTRLAIRLRESGKLVLGIGQKKTPKPFIA--- 137
Query: 157 RRQADYFMDLAYL 169
D F+ + L
Sbjct: 138 --ACDKFIYIEIL 148
>gi|312198295|ref|YP_004018356.1| hypothetical protein FraEuI1c_4493 [Frankia sp. EuI1c]
gi|311229631|gb|ADP82486.1| hypothetical protein FraEuI1c_4493 [Frankia sp. EuI1c]
Length = 314
Score = 41.3 bits (96), Expect = 0.058, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 29/76 (38%), Gaps = 8/76 (10%)
Query: 99 DVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKV-TIVSTVLSDPSMASDQ 155
D+ L ++A + S + + S D FT L ++ V ++P + +
Sbjct: 79 DMALVIEAMDLLHSGAFDGFCLVSSDSDFTRLAERIREAGLTVYGFGEERKTNPGLVA-- 136
Query: 156 LRRQADYFMDLAYLKN 171
D F+ + L +
Sbjct: 137 ---ACDTFIFVETLID 149
>gi|295094936|emb|CBK84027.1| Uncharacterized conserved protein [Coprococcus sp. ART55/1]
Length = 320
Score = 41.3 bits (96), Expect = 0.059, Method: Composition-based stats.
Identities = 22/154 (14%), Positives = 49/154 (31%), Gaps = 27/154 (17%)
Query: 49 YTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVA-------------------KEFTENC 89
Y ++ + + D L G V K+ + +
Sbjct: 12 YAILIDSENVSAKYIESIFDELSRLGSITVRKIYGDWSKNNNGWDKDCLLSYSIQPVQQF 71
Query: 90 GRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLS 147
K+S D + +DA + + ++ + + D FT L + L+ K+V + +
Sbjct: 72 SYTAGKNSTDSAMIIDAMDLLYTSNIDGFCLVTSDSDFTRLASRLREAGKQVIGMGERKT 131
Query: 148 DPSMASDQLRRQADYFMDLAYL-KNEIARDPDED 180
+ S F L L ++ + ++
Sbjct: 132 PKAFVS-----ACTSFKILDSLVTEDLNKPASKN 160
>gi|229825159|ref|ZP_04451228.1| hypothetical protein GCWU000182_00510 [Abiotrophia defectiva ATCC
49176]
gi|229790531|gb|EEP26645.1| hypothetical protein GCWU000182_00510 [Abiotrophia defectiva ATCC
49176]
Length = 249
Score = 41.3 bits (96), Expect = 0.060, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 23/73 (31%), Gaps = 7/73 (9%)
Query: 99 DVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
D+ L +D + VI + D +T L L V V +
Sbjct: 76 DMALVIDTMNLLHKGIYDCFVIVASDSDYTPLAINLHESGVYVIGVGEKK-----TPEAF 130
Query: 157 RRQADYFMDLAYL 169
R D F+ L L
Sbjct: 131 RNSCDEFIFLENL 143
>gi|326436665|gb|EGD82235.1| hypothetical protein PTSG_02906 [Salpingoeca sp. ATCC 50818]
Length = 210
Score = 41.3 bits (96), Expect = 0.062, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 40/118 (33%), Gaps = 15/118 (12%)
Query: 57 EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVK-----------SSMDVELAVD 105
+ LL + V + K F NC + + +DV +
Sbjct: 72 RKADKSRKSLLRNMQQAHIAVHFRYLKPFRTNCEDVNCRYKSAAIEVPVGAGVDVAITTF 131
Query: 106 AFEQSEG-LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162
A ++ +V+F D + L+ AL+ K +V +V+ + LR D
Sbjct: 132 ALADMPTDVKTVVLFVTDPDYAPLIRALKGKGTRVLVVT---DSDAALDPALRDALDE 186
>gi|325267846|ref|ZP_08134496.1| protein of hypothetical function DUF88 [Kingella denitrificans ATCC
33394]
gi|324980727|gb|EGC16389.1| protein of hypothetical function DUF88 [Kingella denitrificans ATCC
33394]
Length = 244
Score = 41.3 bits (96), Expect = 0.063, Method: Composition-based stats.
Identities = 31/176 (17%), Positives = 59/176 (33%), Gaps = 31/176 (17%)
Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
+AL ID N A ID+ ++ + V+ Y D + + + LL
Sbjct: 8 VALLIDADN------APAKKIDF--IMSELANYGSVMVRKIYGNWKDDRLKSWENV--LL 57
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCF 125
D+ ++F G+ D+ + +D + ++ + S D F
Sbjct: 58 DY--------ALAPVQQFDYTKGKNAT----DMAMTIDVMDLLFLNKVDVFCLVSSDCDF 105
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
T L ++ K+V + L F+ L ++ A P E +
Sbjct: 106 TPLAMRIKASGKQV-----IGFGEHKTPKSLVAACSKFLFLDNAQSRTA--PTEQQ 154
>gi|295839453|ref|ZP_06826386.1| conserved hypothetical protein [Streptomyces sp. SPB74]
gi|197698733|gb|EDY45666.1| conserved hypothetical protein [Streptomyces sp. SPB74]
Length = 420
Score = 41.3 bits (96), Expect = 0.063, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 58/147 (39%), Gaps = 18/147 (12%)
Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78
+D+ L++ R RA ++R Y++ G P++ P H L +V
Sbjct: 29 RITVDHAALIQRLRERAEEETGQPLLRIYWF---DGAPDRVPQPEHRRLRVRP----RVT 81
Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136
++ T + GR K +D + + E + +V+ +GDG + + +
Sbjct: 82 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDVVLVTGDGDLLPGLVSAKEHG 139
Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162
V + + +D S+ L +AD
Sbjct: 140 VAVHLWAVQAADGDYNQSEDLVAEADE 166
>gi|121635573|ref|YP_975818.1| hypothetical protein NMC1886 [Neisseria meningitidis FAM18]
gi|161870771|ref|YP_001599944.1| hypothetical protein NMCC_1852 [Neisseria meningitidis 053442]
gi|120867279|emb|CAM11050.1| conserved hypothetical protein [Neisseria meningitidis FAM18]
gi|161596324|gb|ABX73984.1| conserved hypothetical protein [Neisseria meningitidis 053442]
Length = 219
Score = 41.3 bits (96), Expect = 0.063, Method: Composition-based stats.
Identities = 9/51 (17%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Query: 87 ENCGRKRVKS-SMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKV 136
+ + K M + L + + + + +++FSGD F +R+
Sbjct: 139 DVVLDVKQKGVDMRIGLDISSITLKKQADKIILFSGDSDFVPAAKLARREG 189
>gi|28897852|ref|NP_797457.1| hypothetical protein VP1078 [Vibrio parahaemolyticus RIMD 2210633]
gi|153838031|ref|ZP_01990698.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810]
gi|28806065|dbj|BAC59341.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633]
gi|149748565|gb|EDM59424.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810]
Length = 249
Score = 41.3 bits (96), Expect = 0.063, Method: Composition-based stats.
Identities = 27/139 (19%), Positives = 56/139 (40%), Gaps = 20/139 (14%)
Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
IA++ID N+ AS D +++ +F S + T+ Q + L
Sbjct: 17 IAVYIDMENIAAS------DFQLEEVMNSFLSADDEYNCIF--TIKSAYGNQATAKKSLK 68
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS----EGLEHLVIFSGDG 123
+ + F ++ + + K+ D+ L++DAFE ++ + D
Sbjct: 69 TQILEHNFNII--------DTPKIGKEKNRADLLLSLDAFESLHLDNPRVDRYCFMTTDS 120
Query: 124 CFTTLVAALQRKVKKVTIV 142
FT + L++ ++V +V
Sbjct: 121 DFTVIADKLRKFGREVWLV 139
>gi|302404503|ref|XP_003000089.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261361271|gb|EEY23699.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 264
Score = 41.3 bits (96), Expect = 0.066, Method: Composition-based stats.
Identities = 15/97 (15%), Positives = 30/97 (30%), Gaps = 11/97 (11%)
Query: 75 FQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAAL 132
F + ++F G+ D + +DA + + + + S D FT L A +
Sbjct: 42 FTQSIQPVQQFAYTSGKNAT----DSAMIIDAMDLLYTNRFDGFCLASSDSDFTRLAARI 97
Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
+ V + + D F +
Sbjct: 98 RESGLVVYGFGERKTPKPFVA-----ACDKFTHFENI 129
>gi|318057577|ref|ZP_07976300.1| hypothetical protein SSA3_06549 [Streptomyces sp. SA3_actG]
Length = 436
Score = 41.3 bits (96), Expect = 0.067, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 58/147 (39%), Gaps = 18/147 (12%)
Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78
+D+ L++ R RA ++R Y++ G P++ P H L +V
Sbjct: 32 RITVDHAALIQRLRERAEEETGQPLLRIYWF---DGAPDRVPQPEHRRLRVRP----RVT 84
Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136
++ T + GR K +D + + E + +V+ +GDG + + +
Sbjct: 85 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDIVLVTGDGDLLPGLVSAKEHG 142
Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162
V + + +D S+ L +AD
Sbjct: 143 VAVHLWAVQAADGDYNQSEDLVAEADE 169
>gi|322434519|ref|YP_004216731.1| multi-sensor signal transduction histidine kinase [Acidobacterium
sp. MP5ACTX9]
gi|321162246|gb|ADW67951.1| multi-sensor signal transduction histidine kinase [Acidobacterium
sp. MP5ACTX9]
Length = 793
Score = 40.9 bits (95), Expect = 0.070, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Query: 103 AVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKK-VTIVSTVLSDPSMASD--QLRRQ 159
D ++ + + SG+ F+ AA+ +K VT+V + M+++ LR
Sbjct: 248 VTDILALAQRSDEPMYTSGESDFSLGTAAVIKKGSSAVTVVVGLPLPAGMSANMTSLRTA 307
Query: 160 ADYFMDLAYLKNEI 173
AD + LA + E+
Sbjct: 308 ADAYWRLARSRREV 321
>gi|255935257|ref|XP_002558655.1| Pc13g02120 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583275|emb|CAP91281.1| Pc13g02120 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 259
Score = 40.9 bits (95), Expect = 0.070, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 24/73 (32%), Gaps = 7/73 (9%)
Query: 99 DVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
D + +DA + S + + S D FT L A ++ V + +
Sbjct: 78 DSAMIIDAMDLLYSNRYDGFCLVSSDSDFTRLAARIRESGLIVYGFGEQKTPKPFVA--- 134
Query: 157 RRQADYFMDLAYL 169
D F+ L
Sbjct: 135 --ACDKFIYTENL 145
>gi|305665003|ref|YP_003861290.1| hypothetical protein FB2170_01831 [Maribacter sp. HTCC2170]
gi|88707415|gb|EAQ99660.1| hypothetical protein FB2170_01831 [Maribacter sp. HTCC2170]
Length = 255
Score = 40.9 bits (95), Expect = 0.070, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 37/98 (37%), Gaps = 7/98 (7%)
Query: 77 VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQR 134
V+ + A + G K++ D + +DA + S + + S D FT L L+
Sbjct: 53 VLLENAITPIQQYGYTSGKNATDSAMIIDAMDILYSGKVNGFCLVSSDSDFTRLATRLRE 112
Query: 135 KVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
+V + D D F+ + LKN+
Sbjct: 113 AGMQVFGIGEKK-----TPDPFIVACDKFIYIEILKNQ 145
>gi|296138104|ref|YP_003645347.1| hypothetical protein Tpau_0365 [Tsukamurella paurometabola DSM
20162]
gi|296026238|gb|ADG77008.1| conserved hypothetical protein [Tsukamurella paurometabola DSM
20162]
Length = 221
Score = 40.9 bits (95), Expect = 0.072, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 53/154 (34%), Gaps = 16/154 (10%)
Query: 25 GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKE 84
+ ++Y L++ + A +T + + P ++ L G+ V AK
Sbjct: 53 RWLLEYTAALESDTDSRLEPEATVFTNIAPGTADV---VRPWVEALRNVGYAVFAKPK-- 107
Query: 85 FTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC-FTTLVAALQRKVKKVTIVS 143
+ D+ ++ GL L++ S DG F + + V ++
Sbjct: 108 -VDEDSDV----DADMLDHIEVRRYRPGLGGLLVASADGQAFREPLEEIAATGVPVKVLG 162
Query: 144 TVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
A+ L+ F+DL + R+P
Sbjct: 163 F----REHAAWALQSPTLEFVDLEDIAGVF-REP 191
>gi|14520298|ref|NP_125773.1| hypothetical protein PAB0042 [Pyrococcus abyssi GE5]
gi|5457513|emb|CAB49004.1| Conserved archaebacterial protein, DUF88 family [Pyrococcus abyssi
GE5]
Length = 191
Score = 40.9 bits (95), Expect = 0.072, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 65/163 (39%), Gaps = 32/163 (19%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
++IAL +DG N+ K LG + +++A + A Q++P
Sbjct: 26 KRIALLVDGPNILR--KELGVHL--EDIVEALSDLGNIRVAKVIL-------NQYAP-QS 73
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDG 123
L++ + GF+ V V + V+LAV+A + ++ + + + +
Sbjct: 74 LIEAVSNQGFEPVI--------------VAGEIGVKLAVEAMREVYNPNIDIIALATRNT 119
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
F ++ + K K+ I+ S L+ ADY + L
Sbjct: 120 EFVPIILKAKEKGKETAIIGVEPGF----SSALKHAADYVIVL 158
>gi|326440583|ref|ZP_08215317.1| hypothetical protein SclaA2_05933 [Streptomyces clavuligerus ATCC
27064]
Length = 410
Score = 40.9 bits (95), Expect = 0.072, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 57/147 (38%), Gaps = 18/147 (12%)
Query: 25 GFDIDYRKLLKAFRS------RAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78
+D+ L++ R ++R Y++ G P++ P H L + +V
Sbjct: 29 RITVDHTALIQGLRELAERDTERPLLRIYWF---DGAPDRVPQPEHRRLRVMP----RVT 81
Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136
++ T + GR K +D + + E + +V+ +GDG + + +
Sbjct: 82 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDVVLVTGDGDLLPGLMSAKEHG 139
Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162
V + + +D S+ L +AD
Sbjct: 140 VAVHLWAVQAADGDYNQSEDLVAEADE 166
>gi|226326984|ref|ZP_03802502.1| hypothetical protein PROPEN_00844 [Proteus penneri ATCC 35198]
gi|225204821|gb|EEG87175.1| hypothetical protein PROPEN_00844 [Proteus penneri ATCC 35198]
Length = 264
Score = 40.9 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 39/94 (41%), Gaps = 10/94 (10%)
Query: 93 RVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS 150
R K +D++L VD ++ ++ +V+F+GD F + I + + +
Sbjct: 157 RQKG-VDIKLGVDITSIAQKKLVDKIVLFAGDSDFVPAAKLARTNG----IDFVLDALRN 211
Query: 151 MASDQLRRQADYFM--DL-AYLKNEIARDPDEDK 181
+ L D + DL A LK+ + + P
Sbjct: 212 NIAPSLHEHIDGLVSYDLVAILKDILGKPPTTTP 245
>gi|307331652|ref|ZP_07610759.1| protein of unknown function DUF88 [Streptomyces violaceusniger Tu
4113]
gi|306882678|gb|EFN13757.1| protein of unknown function DUF88 [Streptomyces violaceusniger Tu
4113]
Length = 227
Score = 40.9 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 59/147 (40%), Gaps = 18/147 (12%)
Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78
+D+ L++ R RA ++R Y++ G P++ P H L + +V
Sbjct: 29 RISVDHATLIQGLRERAEAETECPLLRIYWF---DGAPDRVPQPEHRRLRVMP----RVT 81
Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136
++ T + GR K +D + + E + +V+ +GDG + + +
Sbjct: 82 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACADIVLVTGDGDLLPGLMSAKEHG 139
Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162
V + + +D S+ L +AD
Sbjct: 140 VAVHLWAVQAADGDYNQSEDLVAEADE 166
>gi|260361784|ref|ZP_05774809.1| conserved hypothetical protein [Vibrio parahaemolyticus K5030]
gi|260877013|ref|ZP_05889368.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034]
gi|260899084|ref|ZP_05907525.1| conserved hypothetical protein [Vibrio parahaemolyticus Peru-466]
gi|308089166|gb|EFO38861.1| conserved hypothetical protein [Vibrio parahaemolyticus Peru-466]
gi|308093770|gb|EFO43465.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034]
gi|308113222|gb|EFO50762.1| conserved hypothetical protein [Vibrio parahaemolyticus K5030]
Length = 240
Score = 40.9 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 27/139 (19%), Positives = 56/139 (40%), Gaps = 20/139 (14%)
Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
IA++ID N+ AS D +++ +F S + T+ Q + L
Sbjct: 8 IAVYIDMENIAAS------DFQLEEVMNSFLSADDEYNCIF--TIKSAYGNQATAKKSLK 59
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS----EGLEHLVIFSGDG 123
+ + F ++ + + K+ D+ L++DAFE ++ + D
Sbjct: 60 TQILEHNFNII--------DTPKIGKEKNRADLLLSLDAFESLHLDNPRVDRYCFMTTDS 111
Query: 124 CFTTLVAALQRKVKKVTIV 142
FT + L++ ++V +V
Sbjct: 112 DFTVIADKLRKFGREVWLV 130
>gi|227488269|ref|ZP_03918585.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
ATCC 51867]
gi|227091839|gb|EEI27151.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
ATCC 51867]
Length = 237
Score = 40.9 bits (95), Expect = 0.074, Method: Composition-based stats.
Identities = 10/63 (15%), Positives = 24/63 (38%), Gaps = 4/63 (6%)
Query: 76 QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQ 133
++ K E + K +D+ + +D ++ + +V+ +GD F +
Sbjct: 144 KIQVKDLTE-DDFSLDINQKG-VDMRIGLDIASLAQQGIVNQIVMITGDSDFVPAAKHAR 201
Query: 134 RKV 136
R
Sbjct: 202 RMG 204
>gi|153832437|ref|ZP_01985104.1| conserved hypothetical protein [Vibrio harveyi HY01]
gi|148871232|gb|EDL70104.1| conserved hypothetical protein [Vibrio harveyi HY01]
Length = 241
Score = 40.9 bits (95), Expect = 0.074, Method: Composition-based stats.
Identities = 27/139 (19%), Positives = 56/139 (40%), Gaps = 20/139 (14%)
Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
IA++ID N+ AS D +++ +F S + T+ Q + L
Sbjct: 9 IAVYIDMENIAAS------DFQLEEVMNSFLSADDEYNCIF--TIKSAYGNQATAKKSLK 60
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS----EGLEHLVIFSGDG 123
+ + F ++ + + K+ D+ L++DAFE ++ + D
Sbjct: 61 TQILEHNFNII--------DTQKIGKEKNRADLLLSLDAFESLHLDNPRVDRYCFMTTDS 112
Query: 124 CFTTLVAALQRKVKKVTIV 142
FT + L++ ++V +V
Sbjct: 113 DFTVIADKLRKFGREVWLV 131
>gi|294812108|ref|ZP_06770751.1| DUF88 domain-containing protein [Streptomyces clavuligerus ATCC
27064]
gi|294324707|gb|EFG06350.1| DUF88 domain-containing protein [Streptomyces clavuligerus ATCC
27064]
Length = 413
Score = 40.9 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 57/147 (38%), Gaps = 18/147 (12%)
Query: 25 GFDIDYRKLLKAFRS------RAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78
+D+ L++ R ++R Y++ G P++ P H L + +V
Sbjct: 32 RITVDHTALIQGLRELAERDTERPLLRIYWF---DGAPDRVPQPEHRRLRVMP----RVT 84
Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136
++ T + GR K +D + + E + +V+ +GDG + + +
Sbjct: 85 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDVVLVTGDGDLLPGLMSAKEHG 142
Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162
V + + +D S+ L +AD
Sbjct: 143 VAVHLWAVQAADGDYNQSEDLVAEADE 169
>gi|83815599|ref|YP_445763.1| hypothetical protein SRU_1643 [Salinibacter ruber DSM 13855]
gi|83756993|gb|ABC45106.1| hypothetical protein SRU_1643 [Salinibacter ruber DSM 13855]
Length = 369
Score = 40.9 bits (95), Expect = 0.077, Method: Composition-based stats.
Identities = 31/186 (16%), Positives = 69/186 (37%), Gaps = 26/186 (13%)
Query: 4 PREKIALFIDGANLYA----------SSKALGFDIDYRKLLKAFRSRAIV--IRAYYYTT 51
P + A+F+D NLY+ S+ A +I + ++ + I Y T
Sbjct: 11 PPRQAAMFVDYDNLYSILKSQSGRDRSTSAYAEEI-FEEVRRYLEEGDDTPTIYGRAYGT 69
Query: 52 VVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE 111
++ +P+ LH G + + + ++ A +
Sbjct: 70 FDTLLDENDAPVPS---ALHREGINPI-----HVPAGMQDNTSEVRLTLD-VTQALTRRS 120
Query: 112 GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD-YFMDLAYLK 170
L+ +VI +G+ + LV ++ + + + + +P +D D ++D L
Sbjct: 121 DLQTVVIITGNRPYLPLVRWIREQGCRPLVAAV---NPPQTADTPSFAEDSRYLDARNLL 177
Query: 171 NEIARD 176
+E +R+
Sbjct: 178 SEESRE 183
>gi|52220908|ref|YP_086777.1| hypothetical protein pAgK84_22 [Agrobacterium tumefaciens]
gi|222112727|ref|YP_002559314.1| hypothetical protein Arad_15022 [Agrobacterium radiobacter K84]
gi|41393790|gb|AAS02138.1| hypothetical protein [Agrobacterium tumefaciens]
gi|221728504|gb|ACM31476.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 275
Score = 40.9 bits (95), Expect = 0.078, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 31/96 (32%), Gaps = 7/96 (7%)
Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKK 138
+ ++F G+ +M ++ A+D + I S D F L A ++ +
Sbjct: 62 IQPVQQFAYTTGKNATDGAMIID-AMDLL-YTGRFSGFCIVSSDSDFARLAARIREQG-- 117
Query: 139 VTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
VT+ D F+ L +
Sbjct: 118 VTVYGFGERK---TPRPFITACDKFVYFDVLNASVE 150
>gi|294507660|ref|YP_003571718.1| hypothetical protein SRM_01845 [Salinibacter ruber M8]
gi|294343988|emb|CBH24766.1| conserved hypothetical protein [Salinibacter ruber M8]
Length = 369
Score = 40.9 bits (95), Expect = 0.080, Method: Composition-based stats.
Identities = 31/186 (16%), Positives = 69/186 (37%), Gaps = 26/186 (13%)
Query: 4 PREKIALFIDGANLYA----------SSKALGFDIDYRKLLKAFRSRAIV--IRAYYYTT 51
P + A+F+D NLY+ S+ A +I + ++ + I Y T
Sbjct: 11 PPRQAAMFVDYDNLYSILKSQSGRDRSTSAYAEEI-FEEVRRYLEEGDDTPTIYGRAYGT 69
Query: 52 VVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE 111
++ +P+ LH G + + + ++ A +
Sbjct: 70 FDTLLDENDAPVPS---ALHREGINPI-----HVPAGMQDNTSEVRLTLD-VTQALTRRS 120
Query: 112 GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD-YFMDLAYLK 170
L+ +VI +G+ + LV ++ + + + + +P +D D ++D L
Sbjct: 121 DLQTVVIITGNRPYLPLVRWIREQGCRPLVAAV---NPPQTADTPSFAEDSRYLDARNLL 177
Query: 171 NEIARD 176
+E +R+
Sbjct: 178 SEESRE 183
>gi|333027817|ref|ZP_08455881.1| hypothetical protein STTU_5321 [Streptomyces sp. Tu6071]
gi|332747669|gb|EGJ78110.1| hypothetical protein STTU_5321 [Streptomyces sp. Tu6071]
Length = 434
Score = 40.9 bits (95), Expect = 0.084, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 58/147 (39%), Gaps = 18/147 (12%)
Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78
+D+ L++ R RA ++R Y++ G P++ P H L +V
Sbjct: 32 RITVDHAALIQRLRERAEEETGQPLLRIYWF---DGAPDRVPQPEHRRLRVRP----RVT 84
Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136
++ T + GR K +D + + E + +V+ +GDG + + +
Sbjct: 85 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDVVLVTGDGDLLPGLVSAKEHG 142
Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162
V + + +D S+ L +AD
Sbjct: 143 VAVHLWAVQAADGDYNQSEDLVAEADE 169
>gi|192361640|ref|YP_001984103.1| hypothetical protein CJA_3650 [Cellvibrio japonicus Ueda107]
gi|190687805|gb|ACE85483.1| conserved hypothetical protein [Cellvibrio japonicus Ueda107]
Length = 281
Score = 40.9 bits (95), Expect = 0.084, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 96 SSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKV 136
+D+ + VD + + ++ LV+ +GD F +R+
Sbjct: 189 KGVDMRIGVDIASLALKKQVDTLVLVAGDSDFVPAAKLARREG 231
>gi|114563957|ref|YP_751471.1| NAD(+) kinase [Shewanella frigidimarina NCIMB 400]
gi|122299140|sp|Q07ZD2|PPNK_SHEFN RecName: Full=Probable inorganic polyphosphate/ATP-NAD kinase;
Short=Poly(P)/ATP NAD kinase
gi|114335250|gb|ABI72632.1| NAD(+) kinase [Shewanella frigidimarina NCIMB 400]
Length = 309
Score = 40.9 bits (95), Expect = 0.085, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 27/75 (36%), Gaps = 10/75 (13%)
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
L WL GF+V+ GR + DV ++D E E + ++ GDG
Sbjct: 42 RLHHWLSMQGFKVIV---------EGRVSAELGADV-CSMDLLEMGEHCDLAIVVGGDGN 91
Query: 125 FTTLVAALQRKVKKV 139
L R V
Sbjct: 92 MLGAARVLARFNVAV 106
>gi|291443977|ref|ZP_06583367.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Streptomyces
roseosporus NRRL 15998]
gi|291346924|gb|EFE73828.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Streptomyces
roseosporus NRRL 15998]
Length = 232
Score = 40.9 bits (95), Expect = 0.086, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 59/147 (40%), Gaps = 18/147 (12%)
Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78
+D+ L++ R RA ++R Y++ G P++ P H L + +V
Sbjct: 32 RITVDHAALIQGLRERAEADTQQPLLRIYWF---DGAPDRVPQPEHRRLRVMP----RVT 84
Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136
++ T + GR K +D + + E + +V+ +GDG + + +
Sbjct: 85 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDVVLVTGDGDLLPGLMSAKEHG 142
Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162
V + + +D S+ L +AD
Sbjct: 143 VAVHLWAVQAADGDYNQSEDLVAEADE 169
>gi|170691868|ref|ZP_02883032.1| conserved hypothetical protein [Burkholderia graminis C4D1M]
gi|170143152|gb|EDT11316.1| conserved hypothetical protein [Burkholderia graminis C4D1M]
Length = 242
Score = 40.5 bits (94), Expect = 0.089, Method: Composition-based stats.
Identities = 11/63 (17%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
Query: 76 QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQ 133
++ +E + R K +D+ + VD + + ++ +V+ +GD F +
Sbjct: 145 KIQMADLRE-DDVTIDIRQKG-VDMRIGVDVSSLAFKKQVDQIVLMAGDADFVPAAKQAR 202
Query: 134 RKV 136
R+
Sbjct: 203 REG 205
>gi|119715267|ref|YP_922232.1| hypothetical protein Noca_1026 [Nocardioides sp. JS614]
gi|119535928|gb|ABL80545.1| hypothetical protein Noca_1026 [Nocardioides sp. JS614]
Length = 207
Score = 40.5 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 8/64 (12%)
Query: 101 ELAV-DAFEQ---SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
ELA+ D ++ + +VI SGDG F L +R+ V V+ + S L
Sbjct: 94 ELALLDGLNLTHAADRFDRVVIASGDGMFEDLAIEARRRGLHVHQVTGL----GRCSAAL 149
Query: 157 RRQA 160
R A
Sbjct: 150 SRAA 153
>gi|229815424|ref|ZP_04445756.1| hypothetical protein COLINT_02472 [Collinsella intestinalis DSM
13280]
gi|229808957|gb|EEP44727.1| hypothetical protein COLINT_02472 [Collinsella intestinalis DSM
13280]
Length = 301
Score = 40.5 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 32/86 (37%), Gaps = 7/86 (8%)
Query: 99 DVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
D + +DA + S ++ I S D FT LVA L+ V + + S
Sbjct: 79 DSAMIIDAMDILYSGTVDGFAIVSSDSDFTRLVARLRESGMIVIGMGEQKTPKPFIS--- 135
Query: 157 RRQADYFMDLAYLKNEIARDPDEDKK 182
+ F L L + + ED +
Sbjct: 136 --ACNQFKYLDLLYAQRQDEESEDAQ 159
>gi|120401224|ref|YP_951053.1| hypothetical protein Mvan_0197 [Mycobacterium vanbaalenii PYR-1]
gi|119954042|gb|ABM11047.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length = 239
Score = 40.5 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 16/116 (13%)
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
P ++ L GF V AK + + LA A + EGL L++ S DG
Sbjct: 108 RPWVEALRNVGFAVFAKPKVDEDSDVDSD--------MLAHIALRRGEGLAGLIVASADG 159
Query: 124 C-FTTLVAALQRKVKKVTIVSTVLSDP-SMASDQLRRQADYFMDLAYLKNEIARDP 177
F + + R +V ++ ++ASD L F+DL + R+P
Sbjct: 160 QAFKLPLEDIARDGVEVQVLGFREHASWALASDTL-----EFVDLEDIPGVF-REP 209
>gi|194337430|ref|YP_002019224.1| hypothetical protein Ppha_2419 [Pelodictyon phaeoclathratiforme
BU-1]
gi|194309907|gb|ACF44607.1| conserved hypothetical protein [Pelodictyon phaeoclathratiforme
BU-1]
Length = 247
Score = 40.5 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 29/173 (16%), Positives = 56/173 (32%), Gaps = 29/173 (16%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
+ E++A+ ID N A+ LL Y
Sbjct: 4 EKTERLAVLIDADNTQATI--------IEGLLAEVAKYGTSSVKRIY---------GDWT 46
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
L W +V+ + + + + G + K++ D + +DA + + I S
Sbjct: 47 STALRSW-----KEVLLEYSIQPIQQFGYTKGKNATDSAMIIDAMDLLYTGRFHGFCIVS 101
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
D FT L + ++ V + + S D F+ + L+ +I
Sbjct: 102 SDSDFTKLASRIRESGLFVYGFGEKKTPSAFVS-----ACDKFIYIEVLRAKI 149
>gi|68535260|ref|YP_249965.1| hypothetical protein jk0195 [Corynebacterium jeikeium K411]
gi|68262859|emb|CAI36347.1| hypothetical protein jk0195 [Corynebacterium jeikeium K411]
Length = 245
Score = 40.5 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 39/121 (32%), Gaps = 25/121 (20%)
Query: 71 HYNGFQVVAKVAKEF------------TENCGRKRVKSSMDVELAVDAFEQSEG--LEHL 116
NG+ + K+ + K +D+ + +D +E + +
Sbjct: 111 TQNGYMLKFAPLKKLCRGAISVDDLRLEDFYLDITQKG-VDMRIGLDIATMAERGIVTQI 169
Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
++ SGD F +R I + + SD L+ D ++ + R
Sbjct: 170 IMISGDSDFVPAAKHARRAG----IDFIIDPLWARISDSLKEHVD------GVRECVRRP 219
Query: 177 P 177
P
Sbjct: 220 P 220
>gi|312620998|ref|YP_003993726.1| protein of unknown function duf88 [Photobacterium damselae subsp.
damselae]
gi|311872719|emb|CBX86813.1| protein of unknown function DUF88 [Photobacterium damselae subsp.
damselae]
Length = 222
Score = 40.5 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 31/161 (19%), Positives = 59/161 (36%), Gaps = 29/161 (18%)
Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
IALF+D N + + F +++ R + + Y L
Sbjct: 9 IALFVDADN----TSSSNFTF----VIEQLLKRGQIHYRHLY---------GNWTKPCLS 51
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE-QSEGLEHLV-IFSGDGCF 125
W +V A +F + K++ D+ + VD E H++ I + D F
Sbjct: 52 SW-----HEVGQLHAAQFIQVFDLCSHKNASDIAMVVDILEWNQSHPNHVIAIMTSDSDF 106
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
T L+ L+R ++T+ + S L++ F+ +
Sbjct: 107 TPLLNQLRR-----HQITTIGIGNANCSIHLQKSFSSFIPI 142
>gi|15679075|ref|NP_276192.1| hypothetical protein MTH1064 [Methanothermobacter
thermautotrophicus str. Delta H]
gi|2622162|gb|AAB85553.1| conserved protein [Methanothermobacter thermautotrophicus str.
Delta H]
Length = 155
Score = 40.5 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 6/75 (8%)
Query: 94 VKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151
V +DV+LAV+AFE ++ + I + + F L+ + K+ ++
Sbjct: 80 VAGDVDVQLAVEAFELIHNPNIDVVAIMTRNADFLPLINIAKENGKETLVIGAEPGF--- 136
Query: 152 ASDQLRRQADYFMDL 166
S L+ AD + L
Sbjct: 137 -SIALQNSADDSIIL 150
>gi|282862137|ref|ZP_06271200.1| protein of unknown function DUF88 [Streptomyces sp. ACTE]
gi|282563162|gb|EFB68701.1| protein of unknown function DUF88 [Streptomyces sp. ACTE]
Length = 415
Score = 40.5 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 59/147 (40%), Gaps = 18/147 (12%)
Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78
+D+ L++ R RA ++R Y++ G P++ P H L + +V
Sbjct: 29 RITVDHAALIQGLRLRAEADTEQPLLRIYWF---DGAPDRVPQPEHRRLRVMP----RVT 81
Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136
++ T + GR K +D + + E + +V+ +GDG + + +
Sbjct: 82 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDVVLVTGDGDLLPGLMSAKEHG 139
Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162
V + + +D S+ L +AD
Sbjct: 140 VAVHLWAVQAADGDYNQSEDLVAEADE 166
>gi|156602934|ref|XP_001618742.1| hypothetical protein NEMVEDRAFT_v1g224852 [Nematostella vectensis]
gi|156200154|gb|EDO26642.1| predicted protein [Nematostella vectensis]
Length = 343
Score = 40.5 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 34/102 (33%), Gaps = 12/102 (11%)
Query: 71 HYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVA 130
GF ++ + + E + K +MD+ S + + S D FT L
Sbjct: 158 RNLGFAIIDEQHRFGVEQRSKLWKKDAMDI-------LYSGKVTGFCLVSSDSDFTRLAT 210
Query: 131 ALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
L+ +V + + D F+ + LK E
Sbjct: 211 RLREAGMEVIGIGEKKTPHPF-----IVACDKFIYIEILKKE 247
>gi|121608659|ref|YP_996466.1| hypothetical protein Veis_1693 [Verminephrobacter eiseniae EF01-2]
gi|121553299|gb|ABM57448.1| conserved hypothetical protein [Verminephrobacter eiseniae EF01-2]
Length = 236
Score = 40.5 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Query: 78 VAKVAKEFTENCGRKRVK-SSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQR 134
+ +E TE V+ +D+ + +D + ++ +V+ +GD F +R
Sbjct: 130 KKRKFEELTEGDLLPNVRQKGVDMRIGIDIASLAFKRQVDQIVLVAGDADFVPAAKLARR 189
Query: 135 KV 136
+
Sbjct: 190 EG 191
>gi|302561149|ref|ZP_07313491.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
gi|302478767|gb|EFL41860.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
Length = 184
Score = 40.1 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 30/147 (20%), Positives = 59/147 (40%), Gaps = 18/147 (12%)
Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78
+D+ L++ R RA ++R Y++ G P++ P H L + +V
Sbjct: 29 RITVDHAALIQGLRERAESDTRQPLLRIYWF---DGAPDRVPQPEHRRLRVMP----RVT 81
Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136
++ T + GR K +D + + E + +V+ +GDG + A +
Sbjct: 82 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDIVLVTGDGDLLPGMMAAKEHG 139
Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162
V + + +D S+ L +AD
Sbjct: 140 VAVHLWAVQAADGDYNQSEDLVAEADE 166
>gi|271965410|ref|YP_003339606.1| hypothetical protein Sros_3953 [Streptosporangium roseum DSM 43021]
gi|270508585|gb|ACZ86863.1| hypothetical protein Sros_3953 [Streptosporangium roseum DSM 43021]
Length = 148
Score = 40.1 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
Query: 109 QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
++ E +VI SGDG F L + V +VS P + +LRR A + L
Sbjct: 91 LADRFERVVIGSGDGIFADFAGWLSGRGVLVVVVS----RPESLNRRLRRTAAQVISLD 145
>gi|296130250|ref|YP_003637500.1| hypothetical protein Cfla_2411 [Cellulomonas flavigena DSM 20109]
gi|296022065|gb|ADG75301.1| conserved hypothetical protein [Cellulomonas flavigena DSM 20109]
Length = 187
Score = 40.1 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 28/164 (17%), Positives = 57/164 (34%), Gaps = 33/164 (20%)
Query: 10 LFIDGANLYASSKALGFDI-----------DYRKLLKAFRSR-AIVIRAYYYTTVVGDPE 57
L +DG N+ A+ LG I + ++L + ++A ++
Sbjct: 9 LLVDGENIDAT---LGSSILGGRPTPEQRPRWERVLTFAQQAWGQPVKALFFL-----NA 60
Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLV 117
+ + L GF + G K +D+ + ++ ++
Sbjct: 61 SNGTLPMSFVQALTAIGFVPI--------PLSGESYEKV-VDIGIKRTLEAIADRDGDVL 111
Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVS----TVLSDPSMASDQLR 157
+ S DG F VA L ++V +++ T S + + LR
Sbjct: 112 LASHDGDFAPEVAQLVDAGRQVGLLAFREFTSQSLAGLTARGLR 155
>gi|160896436|ref|YP_001562018.1| hypothetical protein Daci_0987 [Delftia acidovorans SPH-1]
gi|160362020|gb|ABX33633.1| conserved hypothetical protein [Delftia acidovorans SPH-1]
Length = 234
Score = 40.1 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 37/166 (22%), Positives = 54/166 (32%), Gaps = 43/166 (25%)
Query: 7 KIALFIDGANLYASSKA---LGFDIDYRKLLKAFRSR--------AIVIRAYYYTTVVGD 55
+ ++IDG NLY S + +D L FR R A V+ Y+T V
Sbjct: 8 RTTIYIDGYNLYYSRLKGTPYKW-LDIAAL---FRDRILLPQDPGAEVVAIKYFTAPVKA 63
Query: 56 P-----EQQFSPLHPLLDWLHY---------NGFQVVAKVAKEFTENCGRKRVKSSM--- 98
E L L NGF V + G K+++
Sbjct: 64 SYARHGEASVQAQTQYLRALQARDPGLIQIVNGFHVFE-PTSLPSYQAGANPSKNNVSRV 122
Query: 99 --------DVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQR 134
DV LA+ A+ + + LVI S D + L+
Sbjct: 123 WMIEEKQTDVNLALHAYRDAVRGECDQLVICSNDSDVEPALRMLRE 168
>gi|194334672|ref|YP_002016532.1| hypothetical protein Paes_1873 [Prosthecochloris aestuarii DSM 271]
gi|194312490|gb|ACF46885.1| conserved hypothetical protein [Prosthecochloris aestuarii DSM 271]
Length = 252
Score = 40.1 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 31/174 (17%), Positives = 62/174 (35%), Gaps = 31/174 (17%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
+ +++A+ ID N AS ID LL + +V SP
Sbjct: 4 EKSQRLAVLIDADNTQASI------ID--GLLSEIAKYGV-------ASVRRIYGDWTSP 48
Query: 63 LHPLLDWLHYNGFQ-VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIF 119
L G++ ++ + + + + G + K++ D + +DA + + + I
Sbjct: 49 LLK--------GWKEILLEHSIQPIQQFGYTKGKNATDSAMIIDAMDLLYTGKFDGFCIV 100
Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
S D FT L + ++ V + S D F+ + L+ +
Sbjct: 101 SSDSDFTKLASRIRESGLFVFGFGEKKTPSPFVS-----ACDKFIYIEVLRARV 149
>gi|302131135|ref|ZP_07257125.1| hypothetical protein PsyrptN_07055 [Pseudomonas syringae pv. tomato
NCPPB 1108]
Length = 170
Score = 40.1 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 20/55 (36%), Gaps = 5/55 (9%)
Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
+ S D FT L + L+ + V S + D F+ + L+ +
Sbjct: 80 LVSSDSDFTRLASRLREEGLTVYGFGEEKSPKPFVA-----ACDKFIYIELLRGD 129
>gi|241664407|ref|YP_002982767.1| hypothetical protein Rpic12D_2825 [Ralstonia pickettii 12D]
gi|240866434|gb|ACS64095.1| conserved hypothetical protein [Ralstonia pickettii 12D]
Length = 244
Score = 40.1 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 10/52 (19%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Query: 87 ENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKV 136
+ R K +D+ + VD + + ++ +V+ +GD F +R+
Sbjct: 153 DVTVDVRQKG-VDMRIGVDVSSLAFKQQVDQIVLIAGDADFVPAAKQARREG 203
>gi|318078652|ref|ZP_07985984.1| hypothetical protein SSA3_18541 [Streptomyces sp. SA3_actF]
Length = 229
Score = 40.1 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 58/147 (39%), Gaps = 18/147 (12%)
Query: 25 GFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78
+D+ L++ R RA ++R Y++ G P++ P H L +V
Sbjct: 32 RITVDHAALIQRLRERAEEETGQPLLRIYWF---DGAPDRVPQPEHRRLRVRP----RVT 84
Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136
++ T + GR K +D + + E + +V+ +GDG + + +
Sbjct: 85 VRLG-ALTRSDGRWAQKG-VDAAMHAELTELARNRACSDIVLVTGDGDLLPGLVSAKEHG 142
Query: 137 KKVTIVSTVLSDPS-MASDQLRRQADY 162
V + + +D S+ L +AD
Sbjct: 143 VAVHLWAVQAADGDYNQSEDLVAEADE 169
>gi|328955609|ref|YP_004372942.1| hypothetical protein Corgl_1019 [Coriobacterium glomerans PW2]
gi|328455933|gb|AEB07127.1| hypothetical protein Corgl_1019 [Coriobacterium glomerans PW2]
Length = 310
Score = 40.1 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 28/73 (38%), Gaps = 7/73 (9%)
Query: 99 DVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
D + +DA + S ++ I S D FT LVA L+ +V + + S
Sbjct: 80 DSAMIIDAMDILYSGTVDGFTIVSSDSDFTRLVARLRESGMQVIGMGEQKTPEPFIS--- 136
Query: 157 RRQADYFMDLAYL 169
+ F L L
Sbjct: 137 --ACNQFKYLDLL 147
>gi|237751560|ref|ZP_04582040.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879]
gi|229372926|gb|EEO23317.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879]
Length = 248
Score = 40.1 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 27/163 (16%), Positives = 56/163 (34%), Gaps = 30/163 (18%)
Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
IA+ D N+ ++ I + +L+ + V+ Y + D +Q ++
Sbjct: 2 IAILFDCENVSST------HIPF--ILQRLKRFGKVVLKYAF----KDWSRQSDWTQQVV 49
Query: 68 DWLHYNGFQV-VAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126
+ QV K K ++ + ++ + +EH+ I S D F
Sbjct: 50 EEYGMIPIQVFRHKNFKNTSD----------LKIQASAYKILYESNIEHICIVSSDSDFR 99
Query: 127 TLVAALQRKVKKVTIVSTVLSDPSM-ASDQLRRQADYFMDLAY 168
+ +Q K K + M + L+ +F+ L
Sbjct: 100 DIALEIQAKGK------ISIGFGEMKTPESLQNAYTHFIHLQS 136
>gi|296284143|ref|ZP_06862141.1| hypothetical protein CbatJ_10981 [Citromicrobium bathyomarinum
JL354]
Length = 245
Score = 40.1 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 29/73 (39%), Gaps = 6/73 (8%)
Query: 99 DVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
D+ + +DA + ++ I S D FT LV L++ V + P+
Sbjct: 81 DMAMTIDAIDLLYQGKVDGFGIMSSDSDFTPLVTRLRQDGLVVYGFGSTNKTPA----AF 136
Query: 157 RRQADYFMDLAYL 169
+ F+D+ L
Sbjct: 137 KSACTRFIDIDAL 149
>gi|312898144|ref|ZP_07757535.1| conserved hypothetical protein [Megasphaera micronuciformis F0359]
gi|310620641|gb|EFQ04210.1| conserved hypothetical protein [Megasphaera micronuciformis F0359]
Length = 281
Score = 40.1 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 56/175 (32%), Gaps = 29/175 (16%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
K+A+ ID N+ ID +L + ++ Y +
Sbjct: 6 KLAVLIDAENI------SNKYID--VILSEANNLGNIVYKRIY------GNWTTPQMASW 51
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124
+ + N Q ++++ K+S D L +D + L+ I S D
Sbjct: 52 KNIILDNAIQ----PIQQYS----NTIRKNSSDSALIIDTMDLLYQSDLDAYCIVSSDSD 103
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
FT L + L+ + + S + F+ L L E +P E
Sbjct: 104 FTRLASRLRE-----SQKYVLGMGESKTPRSFISACNKFLYLDVLFEEACEEPVE 153
>gi|225018409|ref|ZP_03707601.1| hypothetical protein CLOSTMETH_02356 [Clostridium methylpentosum
DSM 5476]
gi|224948827|gb|EEG30036.1| hypothetical protein CLOSTMETH_02356 [Clostridium methylpentosum
DSM 5476]
Length = 246
Score = 40.1 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 34/171 (19%), Positives = 56/171 (32%), Gaps = 29/171 (16%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
+ KIA+ ID N+ S K + + +L + Y Q
Sbjct: 2 EQERKIAVLIDADNV--SQKYIKY------ILDEIAKHGLPTYKRIY--GDWTSPQLARW 51
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
LLD + + ++++ G K+S D L +DA + S + I S
Sbjct: 52 KDVLLD------YSIT--PIQQYSYTAG----KNSTDSALIIDAMDILYSHNINGFCIVS 99
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
D FT LV L+ V + + + + F L L
Sbjct: 100 SDSDFTRLVVRLRESGMYVVGMGEKKTPKPFIA-----ACEQFKYLEALAQ 145
>gi|150003300|ref|YP_001298044.1| hypothetical protein BVU_0716 [Bacteroides vulgatus ATCC 8482]
gi|160890159|ref|ZP_02071162.1| hypothetical protein BACUNI_02599 [Bacteroides uniformis ATCC 8492]
gi|149931724|gb|ABR38422.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
gi|156860547|gb|EDO53978.1| hypothetical protein BACUNI_02599 [Bacteroides uniformis ATCC 8492]
Length = 240
Score = 40.1 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 12/68 (17%), Positives = 24/68 (35%), Gaps = 7/68 (10%)
Query: 99 DVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
D+ L +DA + ++ + + DG + L ++ KV + L
Sbjct: 80 DIALVIDAMDILRDGRVDCFCLVASDGDYNPLAQRIREAGLKV-----LGYGEGKTPVSL 134
Query: 157 RRQADYFM 164
R F+
Sbjct: 135 IRSCSVFL 142
>gi|257898759|ref|ZP_05678412.1| phosphoribosylaminoimidazole carboxylase [Enterococcus faecium
Com15]
gi|257836671|gb|EEV61745.1| phosphoribosylaminoimidazole carboxylase [Enterococcus faecium
Com15]
Length = 374
Score = 40.1 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 51/146 (34%), Gaps = 28/146 (19%)
Query: 31 RKLLKA-FRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC 89
+LL+ F ++ A Y T V + D + G+ V K + +
Sbjct: 106 DRLLEKSFLETNNIVIAPYATIVSPTD---------IQDAIDGIGYPCVLKTTRGGYDGK 156
Query: 90 GRKRVKSSMDVELAVDAFEQSEGLEHLVI-----------FSGDGCFT--TLVAALQRKV 136
G+ +KS D+ A+D + + I +G G FT +V + R
Sbjct: 157 GQYVLKSRADLAPAMDLLREGTCVLEAWIPFEKEISIMVAGNGQGDFTTFPVVENIHRNN 216
Query: 137 KKVTIVSTVLSDPSMASDQLRRQADY 162
++ P+ + + +A+
Sbjct: 217 ILHETIA-----PAAIAQDVIEEAER 237
>gi|58583681|ref|YP_202697.1| hypothetical protein XOO4058 [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|58428275|gb|AAW77312.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
KACC10331]
Length = 84
Score = 40.1 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 9/45 (20%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Query: 93 RVKS-SMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKV 136
R K M + + + + ++ +V+F+GD F +R+
Sbjct: 2 RQKGVDMRIGIDISSLALKHQVDQIVLFAGDADFVPAAKLARREG 46
>gi|255012325|ref|ZP_05284451.1| hypothetical protein B2_00320 [Bacteroides sp. 2_1_7]
Length = 240
Score = 40.1 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 12/68 (17%), Positives = 24/68 (35%), Gaps = 7/68 (10%)
Query: 99 DVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
D+ L +DA + ++ + + DG + L ++ KV + L
Sbjct: 80 DIALVIDAMDILRDGRVDCFCLVASDGDYNPLAQRIREAGLKV-----LGYGEGKTPVSL 134
Query: 157 RRQADYFM 164
R F+
Sbjct: 135 IRSCSVFL 142
>gi|332829851|gb|EGK02493.1| hypothetical protein HMPREF9455_01450 [Dysgonomonas gadei ATCC
BAA-286]
Length = 251
Score = 40.1 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 28/167 (16%), Positives = 54/167 (32%), Gaps = 29/167 (17%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
K+A+ ID N+ S + + +L I Y PL
Sbjct: 8 KLAVLIDADNIPYS--------NIKGMLDEITKFGIPTIKRIY--GDWTKPSVSGWKQPL 57
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124
L+ + ++++ G+ D + +DA + S+ ++ + S D
Sbjct: 58 LE-------HAIT-PIQQYSYTTGKNAT----DSAMIIDAMDILHSDKVDGFCLVSSDSD 105
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
FT L L+ V + + D F+ + L+N
Sbjct: 106 FTRLAVRLRESGMFVLGLGEKKTPNPF-----IVACDKFIYIEILEN 147
>gi|239817540|ref|YP_002946450.1| hypothetical protein Vapar_4578 [Variovorax paradoxus S110]
gi|239804117|gb|ACS21184.1| protein of unknown function DUF88 [Variovorax paradoxus S110]
Length = 527
Score = 40.1 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 34/195 (17%), Positives = 67/195 (34%), Gaps = 37/195 (18%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP---- 62
KIALF+D N+Y+ + + + + F + + ++ T G+ S
Sbjct: 2 KIALFVDFDNVYSGLRRISAE-----AAERFSRQPLRWLSWLTTGADGENIDDTSRDRRR 56
Query: 63 ------------LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110
H GF++V K+S D+ L +D +
Sbjct: 57 VLVRRCYLNPVMYQKYRRPFHEAGFEIVDCPPM-------TATGKTSTDIHLVLDTMDAL 109
Query: 111 ---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
+ ++FS D F+ ++ + TV+ S+ + AD +D+
Sbjct: 110 LDDTHFDEFIVFSADADFSPVLRR-----LRRHDRRTVVFAAGAMSESYKASADRVIDIQ 164
Query: 168 Y-LKNEIARDPDEDK 181
L + + ED+
Sbjct: 165 TFLHDALELPSAEDE 179
>gi|332158254|ref|YP_004423533.1| hypothetical protein PNA2_0613 [Pyrococcus sp. NA2]
gi|331033717|gb|AEC51529.1| hypothetical protein PNA2_0613 [Pyrococcus sp. NA2]
Length = 194
Score = 40.1 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 37/188 (19%), Positives = 71/188 (37%), Gaps = 41/188 (21%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
++IAL +DG N+ K LG + +++A + A Q++P
Sbjct: 26 KRIALLVDGPNILR--KELGIHL--EDIVEALSKLGNIRVAKVIL-------NQYAP-QS 73
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDG 123
L++ + GF+ V V + V+LAV+A + ++ L + + +
Sbjct: 74 LIEAVSNQGFEPVI--------------VAGEIGVKLAVEAMREVYNPNIDILALATRNT 119
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA---------YLKNEIA 174
F ++ + K K+ I+ S L+ ADY + L K+
Sbjct: 120 EFVPIILKAKEKGKETAIIGVEPGF----SSALKHAADYVIILEPRGEVSEERDFKDIEE 175
Query: 175 RDPDEDKK 182
RD ++
Sbjct: 176 RDGRRKER 183
>gi|162148603|ref|YP_001603064.1| hypothetical protein GDI_2830 [Gluconacetobacter diazotrophicus PAl
5]
gi|161787180|emb|CAP56773.1| hypothetical protein GDI2830 [Gluconacetobacter diazotrophicus PAl
5]
Length = 199
Score = 40.1 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 29/192 (15%), Positives = 61/192 (31%), Gaps = 40/192 (20%)
Query: 5 REKIALFIDGANLYASSKAL---------GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGD 55
+++ + D +N++ S ++ GF I + L+ + + + +V
Sbjct: 2 NDRVHIIWDNSNIFHSGRSTGDILERRTDGFRIYFENLIDLAADGRPIEQVFCVGSVPPP 61
Query: 56 PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGL-- 113
+ + L K + F R ++ +D L V
Sbjct: 62 TNSVWGHIERL-----------TGKKPELFERGAASGREQA-VDQALQVRMLRLGFDYRP 109
Query: 114 -EHLVIFSGDGC--------FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY-- 162
E +V+ +GDG F L KV +++ ++R A+
Sbjct: 110 PETIVLLTGDGSGYEDGTGFFADA-ERLHNFGWKVEVLAWQNHCK----REMRNWAETNG 164
Query: 163 -FMDLAYLKNEI 173
F+ L + I
Sbjct: 165 VFVPLDDFYSSI 176
>gi|21244544|ref|NP_644126.1| hypothetical protein XAC3820 [Xanthomonas axonopodis pv. citri str.
306]
gi|21110218|gb|AAM38662.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306]
Length = 268
Score = 40.1 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 27/172 (15%), Positives = 53/172 (30%), Gaps = 29/172 (16%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
+ ++IAL ID N + A D+ ++ + + + + + E
Sbjct: 6 NADKRIALLIDADN----APAGKIDVVLAEVARYGVANVRRAYGNWKSPHLKGWEAALHD 61
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
+ ++F + G+ D+ + +DA + + L+ I S
Sbjct: 62 Y--------------AIRPIQQFAYSSGKNAS----DMAMVIDAMDLLYARNLDGFAIVS 103
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
D FT LV L KV + F + L +
Sbjct: 104 SDADFTPLVMRLLTDGMKVYGFGEKKTPAPFV-----NACSKFTYVEALGEQ 150
>gi|167766019|ref|ZP_02438072.1| hypothetical protein CLOSS21_00511 [Clostridium sp. SS2/1]
gi|317499424|ref|ZP_07957691.1| hypothetical protein HMPREF0996_02675 [Lachnospiraceae bacterium
5_1_63FAA]
gi|167712099|gb|EDS22678.1| hypothetical protein CLOSS21_00511 [Clostridium sp. SS2/1]
gi|316893296|gb|EFV15511.1| hypothetical protein HMPREF0996_02675 [Lachnospiraceae bacterium
5_1_63FAA]
Length = 319
Score = 40.1 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 42/108 (38%), Gaps = 9/108 (8%)
Query: 68 DWLHYNGF--QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDG 123
+W NG+ +++ + + + K++ D+ + +DA + + ++ I + D
Sbjct: 48 NWSKANGWNEELLLEYSIIPVQQFSYTSGKNATDMAMVIDAMDLLYGKKVDGFCIVTSDS 107
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
FT L L+ + + S L R + F+ L +
Sbjct: 108 DFTRLAMRLRE-----EHMYVIGMGESKTPVALTRACNKFIHLNLIYE 150
>gi|300871590|ref|YP_003786463.1| hypothetical protein BP951000_1984 [Brachyspira pilosicoli 95/1000]
gi|300689291|gb|ADK31962.1| conserved hypothetical protein [Brachyspira pilosicoli 95/1000]
Length = 260
Score = 40.1 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 64/145 (44%), Gaps = 16/145 (11%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
++I ++ID N+ L F+++++ +L+ +Y + + D + +S
Sbjct: 1 MKRIGIYIDLENIAH----LKFNVNFKLILEDIIK--------FYRSNLKDKDIYYSIKK 48
Query: 65 PLLDWLHYNGFQVVAKVA-KEFTENCGRKRVKSSMDVELAVDAFE---QSEGLEHLVIFS 120
D ++ + + + + K+ D+ ++DAFE ++ ++ +V S
Sbjct: 49 AYGDNKSIKLYEKELRDLHIDIIHSVHINKAKNMSDMISSIDAFEDFVFNKNIDIIVFVS 108
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTV 145
D +T ++ L+R IV+T+
Sbjct: 109 RDVDYTIVMERLKRHGAIAAIVTTI 133
>gi|291559982|emb|CBL38782.1| Uncharacterized conserved protein [butyrate-producing bacterium
SSC/2]
Length = 315
Score = 40.1 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 42/108 (38%), Gaps = 9/108 (8%)
Query: 68 DWLHYNGF--QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDG 123
+W NG+ +++ + + + K++ D+ + +DA + + ++ I + D
Sbjct: 44 NWSKANGWNEELLLEYSIIPVQQFSYTSGKNATDMAMVIDAMDLLYGKKVDGFCIVTSDS 103
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
FT L L+ + + S L R + F+ L +
Sbjct: 104 DFTRLAMRLRE-----EHMYVIGMGESKTPVALTRACNKFIHLNLIYE 146
>gi|227824978|ref|ZP_03989810.1| conserved hypothetical protein [Acidaminococcus sp. D21]
gi|226905477|gb|EEH91395.1| conserved hypothetical protein [Acidaminococcus sp. D21]
Length = 262
Score = 40.1 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 39/176 (22%), Positives = 60/176 (34%), Gaps = 29/176 (16%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
+ +K AL ID N+ S ID +L + VI Y Q S
Sbjct: 2 EQDKKFALLIDAENI---SPQY---IDI--ILSEANNLGNVIYKRIY--GNWTSPQMGSW 51
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFS 120
+LD + ++++ G K+S D L +D + L+ I S
Sbjct: 52 KSTILDN--------AIQPVQQYSNTSG----KNSSDSALIIDTMDLLYRTQLDGFCIVS 99
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
D FT L + L+ K V + S + F+ L L E R+
Sbjct: 100 SDSDFTRLASRLRESDKYV-----LGMGESKTPRSFISACNRFLYLDVLYAESKRE 150
>gi|116672106|ref|YP_833039.1| hypothetical protein Arth_3564 [Arthrobacter sp. FB24]
gi|116612215|gb|ABK04939.1| hypothetical protein Arth_3564 [Arthrobacter sp. FB24]
Length = 415
Score = 40.1 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 36/184 (19%), Positives = 68/184 (36%), Gaps = 15/184 (8%)
Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
P + A+F+D N+Y AL D + A + ++F
Sbjct: 11 PGIRAAMFVDFDNVYTGLLAL----DPLAAKRFAEDPKHWADALS-AGGSAESSRRFLIR 65
Query: 64 HPLLDWLHYNGFQVV-AKVAKEFTE-NCGRKRVKSSMDVEL---AVDAFEQSEGLEHLVI 118
+ L+ + Y+ ++ + + +R KSS D+ L A+DA S G++ I
Sbjct: 66 NCYLNPVVYSKYRTYWTRAGFRVIDCPSLTQRGKSSTDINLVLDAMDALSGSAGIDEFFI 125
Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
S D FT+L+ + K T+++ + R AD ++ +
Sbjct: 126 ASADADFTSLIQRFRAADKMTTVIAA-----GAVAFAYREMADSVVESHDFVAILNGTTA 180
Query: 179 EDKK 182
E +
Sbjct: 181 EPIR 184
>gi|145221059|ref|YP_001131737.1| hypothetical protein Mflv_0455 [Mycobacterium gilvum PYR-GCK]
gi|145213545|gb|ABP42949.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
Length = 237
Score = 40.1 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 43/112 (38%), Gaps = 15/112 (13%)
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
P ++ L GF V AK + D+ LA A +GL L++ S DG
Sbjct: 106 RPWVEALRNVGFAVFAKPKI---DEDSDV----DSDM-LAHIALRNEQGLAGLIVASADG 157
Query: 124 C-FTTLVAALQRKVKKVTIVSTVLSDP-SMASDQLRRQADYFMDLAYLKNEI 173
F + + R +V ++ ++ASD L F+DL +
Sbjct: 158 QAFKQPLEDIARSGVEVQVLGFREHASWALASDTL-----EFVDLEDIPGVF 204
>gi|256824702|ref|YP_003148662.1| hypothetical protein Ksed_08430 [Kytococcus sedentarius DSM 20547]
gi|256688095|gb|ACV05897.1| hypothetical protein Ksed_08430 [Kytococcus sedentarius DSM 20547]
Length = 190
Score = 39.7 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 45/132 (34%), Gaps = 24/132 (18%)
Query: 10 LFIDGANLYAS-SKALGFDIDY------RKLLKAFRS--RAIVIRAYYYTTVVGDPEQQF 60
L +DG N+ A+ LG +LL +S V ++ +
Sbjct: 12 LLVDGENIDATLGNCLGRRPQPDERPRWERLLTHVQSSWEQPVTGLFFLAA------SED 65
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
+ L G++ + ++V +D+ + +E + +V+ S
Sbjct: 66 HLPMNFVQALMAIGYKPI------PLSGAADEKV---VDIAIQKTLEALAERSDDVVLVS 116
Query: 121 GDGCFTTLVAAL 132
DG F + AL
Sbjct: 117 HDGDFLPQMTAL 128
>gi|315441970|ref|YP_004074849.1| hypothetical protein Mspyr1_03000 [Mycobacterium sp. Spyr1]
gi|315260273|gb|ADT97014.1| hypothetical protein Mspyr1_03000 [Mycobacterium sp. Spyr1]
Length = 235
Score = 39.7 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 43/112 (38%), Gaps = 15/112 (13%)
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
P ++ L GF V AK + D+ LA A +GL L++ S DG
Sbjct: 104 RPWVEALRNVGFAVFAKPKI---DEDSDV----DSDM-LAHIALRNEQGLAGLIVASADG 155
Query: 124 C-FTTLVAALQRKVKKVTIVSTVLSDP-SMASDQLRRQADYFMDLAYLKNEI 173
F + + R +V ++ ++ASD L F+DL +
Sbjct: 156 QAFKQPLEDIARSGVEVQVLGFREHASWALASDTL-----EFVDLEDIPGVF 202
>gi|168032729|ref|XP_001768870.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679782|gb|EDQ66224.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 431
Score = 39.7 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 26/71 (36%), Gaps = 8/71 (11%)
Query: 80 KVAKEFTENCGR-----KRVKSSM-DVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAA 131
K +E + G K D + VD F + +V+ +GD F +
Sbjct: 60 KKVREGCQRTGVNLIDVPNGKKDAADKAILVDMFLFALDNPCSTIVLVTGDVDFAPALHK 119
Query: 132 LQRKVKKVTIV 142
L ++ V +V
Sbjct: 120 LGQRGYVVVLV 130
>gi|34222877|sp|Q8EGS1|PPNK_SHEON RecName: Full=Probable inorganic polyphosphate/ATP-NAD kinase;
Short=Poly(P)/ATP NAD kinase
gi|24347283|gb|AAN54584.1|AE015598_3 conserved hypothetical protein [Shewanella oneidensis MR-1]
Length = 309
Score = 39.7 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 43/126 (34%), Gaps = 16/126 (12%)
Query: 24 LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ--FSPLHPLLDWLHYNGFQVVAKV 81
+G + D + RS + ++ ++G P L L WL G++V+ +
Sbjct: 1 MGINFDVSR--PKARSNINMTTKFHTIGLIGKPHHPGTNQTLKRLHHWLTMQGYEVLVEE 58
Query: 82 AKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTI 141
G V AVD E E + ++ GDG L R +V +
Sbjct: 59 --RVATELGPHIV--------AVDLLEIGERCDLAIVVGGDGNMLGAARVLARF--EVGV 106
Query: 142 VSTVLS 147
+
Sbjct: 107 IGVNRG 112
>gi|213493840|gb|ACJ48051.1| 6-hydroxy-3-succinoylpyridine hydroxylase [Pseudomonas putida]
Length = 204
Score = 39.7 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 33/84 (39%), Gaps = 3/84 (3%)
Query: 80 KVAKEFTENCGRKRVKSSMDVELAVDAF--EQSEGLEHLVIFSGDGCFTTLVAALQRK-V 136
K +E E K + DV LA+ A+ + ++H VI + D + ++
Sbjct: 107 KAPRECREIQAWKVEEKQSDVNLALQAYHDSITGQVDHAVIVTNDTDIAPALQMIRAHTD 166
Query: 137 KKVTIVSTVLSDPSMASDQLRRQA 160
++ +V A+ L + A
Sbjct: 167 VRIGVVVPTSGQNRSANTDLIKFA 190
>gi|311895493|dbj|BAJ27901.1| hypothetical protein KSE_20780 [Kitasatospora setae KM-6054]
Length = 395
Score = 39.7 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 37/163 (22%), Positives = 67/163 (41%), Gaps = 22/163 (13%)
Query: 28 IDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKV 81
+D+ L+ A R RA ++R Y++ V +++ +P H L L +V ++
Sbjct: 32 VDHPVLIAALRERAQAETGLPLLRIYWFDAAV---DRRPAPEHRRLRVLP----RVTVRL 84
Query: 82 AKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKV 139
T GR K +D + + E + +V+ +GDG VA+ + V
Sbjct: 85 G-ALTRAEGRWVQKG-VDAAMHAELSELARNHACADVVLVTGDGDLLPGVASAKEHGVAV 142
Query: 140 TIVSTVLSDPS-MASDQLRRQADYFMDLAYLKNEIAR--DPDE 179
+ + +D S++L +AD L + I R P E
Sbjct: 143 HLWALEAADGDFNQSEELVGEADERRVLD--RAWIQRWARPRE 183
>gi|269796423|ref|YP_003315878.1| hypothetical protein Sked_31470 [Sanguibacter keddieii DSM 10542]
gi|269098608|gb|ACZ23044.1| hypothetical protein Sked_31470 [Sanguibacter keddieii DSM 10542]
Length = 192
Score = 39.7 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 30/187 (16%), Positives = 61/187 (32%), Gaps = 40/187 (21%)
Query: 1 MFDPREKIA----LFIDGANLYASSKALGFDI---------DYRKLLKAFRSRAIVIRAY 47
M ++ A L +DG N+ A+ LG ++ R A +
Sbjct: 1 MSGSEQRTARPTYLLVDGENIDAT---LGMNVLGHRPAPEERPR--WDRISEFAQTLWGQ 55
Query: 48 YYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVEL--AVD 105
T + P + L G++ + + +D+ + ++
Sbjct: 56 PVTPLFFLNASSGQMPMPFVQALLAMGYRPI---------PLAGASHEKVVDIGIQRTLE 106
Query: 106 AFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS----MASDQLRRQAD 161
A + +G +++ S DG F V AL ++V ++ +++ L
Sbjct: 107 AIKDVDG--DVLLASHDGDFLPQVEALLDGERRVGLMCFREFVNGRLNELSARGL----- 159
Query: 162 YFMDLAY 168
F DL
Sbjct: 160 EFFDLEE 166
>gi|242398802|ref|YP_002994226.1| hypothetical protein TSIB_0816 [Thermococcus sibiricus MM 739]
gi|242265195|gb|ACS89877.1| hypothetical protein TSIB_0816 [Thermococcus sibiricus MM 739]
Length = 153
Score = 39.7 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 44/120 (36%), Gaps = 17/120 (14%)
Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEF-----------TENCGRKRVKSSMDVELAVDAFE 108
L +L L+ G VV KV + V +DV +AV+ +
Sbjct: 23 DISLEDILYALNDIGRIVVGKVVINYEFSSNLLKSIIDSGLESVMVNGRVDVAVAVEGMK 82
Query: 109 QS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
+ L + + D F LV +R K V +++ S+ L+ AD ++L
Sbjct: 83 IIYNPRINVLALATRDAHFMPLVFEAKRMGKDVIVIAPEKK----VSEALQNIADKTIEL 138
>gi|315231507|ref|YP_004071943.1| hypothetical protein TERMP_01745 [Thermococcus barophilus MP]
gi|315184535|gb|ADT84720.1| hypothetical protein TERMP_01745 [Thermococcus barophilus MP]
Length = 185
Score = 39.3 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 35/169 (20%), Positives = 64/169 (37%), Gaps = 32/169 (18%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
+KIAL IDG N+ F+I +++A + A Q++P
Sbjct: 30 KKIALLIDGPNI----LRKEFNIHLEDIVEALEQLGNIRVAKVIL-------NQYAP-QG 77
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDG 123
L++ + GF+ + G VK LAV+A + ++ + + + +
Sbjct: 78 LIEAVANQGFEPIIVP--------GETGVK------LAVEAMREIYNPNIDIIALATRNA 123
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
F ++ + K K+ I+ S L+ ADY + L E
Sbjct: 124 EFLPIILKAKEKGKETVIIGVEPGF----SAALKHGADYVIVLTPRGEE 168
>gi|256396571|ref|YP_003118135.1| hypothetical protein Caci_7469 [Catenulispora acidiphila DSM 44928]
gi|256362797|gb|ACU76294.1| protein of unknown function DUF88 [Catenulispora acidiphila DSM
44928]
Length = 260
Score = 39.3 bits (91), Expect = 0.20, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 45/165 (27%), Gaps = 29/165 (17%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
K+A+ ID N + + + LL Y
Sbjct: 8 KLAVLIDADN---AQPS-----NAATLLAEIAKYGTAHVKRAY---GDWTGTSLKGWKEH 56
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124
L L + ++F G+ D + +DA + S E I S D
Sbjct: 57 LLALS-------IQPIQQFAYTSGKNAT----DAAMVIDAMDLLYSGRFEGFCIVSSDSD 105
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
FT L A ++ V + + D F+ L
Sbjct: 106 FTRLAARIRESGLIVYGFGERKTPKPFVA-----ACDKFVYTENL 145
>gi|242398824|ref|YP_002994248.1| hypothetical protein TSIB_0838 [Thermococcus sibiricus MM 739]
gi|242265217|gb|ACS89899.1| hypothetical protein TSIB_0838 [Thermococcus sibiricus MM 739]
Length = 187
Score = 39.3 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 70/182 (38%), Gaps = 35/182 (19%)
Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
+KIAL IDG N+ F++ ++ A + A Q++P
Sbjct: 34 KKIALLIDGPNI----LRKEFNVHLEDIVAALEELGNIRVAKVVL-------NQYAP-QG 81
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDG 123
L++ + GF+ + G VK LAV+A ++ ++ + + + +
Sbjct: 82 LIEAIANQGFEPII--------VAGETGVK------LAVEAMREIYNQNIDIIALATRNA 127
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL---AYLKNEIARDPDED 180
F ++ + K K+ I+ S L+ ADY + L + I +D +
Sbjct: 128 EFLPIILKAKEKGKETAIIGIEPGF----SAALKHAADYVIALERGEDNEEIIIQDTKKR 183
Query: 181 KK 182
+K
Sbjct: 184 RK 185
>gi|28275219|ref|NP_717140.2| hypothetical protein SO_1523 [Shewanella oneidensis MR-1]
Length = 292
Score = 39.3 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 19/87 (21%), Positives = 29/87 (33%), Gaps = 12/87 (13%)
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L L WL G++V+ + G V AVD E E + ++
Sbjct: 21 QTLKRLHHWLTMQGYEVLVEE--RVATELGPHIV--------AVDLLEIGERCDLAIVVG 70
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLS 147
GDG L R +V ++
Sbjct: 71 GDGNMLGAARVLARF--EVGVIGVNRG 95
>gi|121604991|ref|YP_982320.1| hypothetical protein Pnap_2090 [Polaromonas naphthalenivorans CJ2]
gi|120593960|gb|ABM37399.1| conserved hypothetical protein [Polaromonas naphthalenivorans CJ2]
Length = 268
Score = 39.3 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 56/146 (38%), Gaps = 18/146 (12%)
Query: 3 DPREKIALFIDGANLYAS---SKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
+ + +AL+ D NL+AS ++ G Y K FR + +I +
Sbjct: 7 ESQPSVALYWDFENLHASLCEARQEGA---YSKQDNRFRVQEPLIDIQAVVELAASFGP- 62
Query: 60 FSPLHPLLDWLHYNGFQ-----VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLE 114
+ +W +++ ++ ++ + F K+ D++L +DA E
Sbjct: 63 IAINRAYCNWQYFSRYRDALLQCAVELIQLFPPG---GSAKNGADIKLCLDAMEDMGRFG 119
Query: 115 HL---VIFSGDGCFTTLVAALQRKVK 137
H+ +I GD F + ++ +
Sbjct: 120 HIGTIIIVGGDSDFMPVSQKVKAAGR 145
>gi|295394693|ref|ZP_06804911.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC
49030]
gi|294972463|gb|EFG48320.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC
49030]
Length = 257
Score = 39.3 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 10/52 (19%), Positives = 20/52 (38%), Gaps = 3/52 (5%)
Query: 87 ENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136
+ K +D+ + +D +E + +V+ SGD F +R
Sbjct: 152 DFDLDITQKG-VDMRIGLDIASLAERRLVNQIVMISGDSDFVPAAKHARRSG 202
>gi|25026904|ref|NP_736958.1| hypothetical protein CE0348 [Corynebacterium efficiens YS-314]
gi|23492184|dbj|BAC17158.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
Length = 281
Score = 39.3 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 9/52 (17%), Positives = 21/52 (40%), Gaps = 3/52 (5%)
Query: 87 ENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136
+ K +D+ + +D +E + +V+ +GD F +R+
Sbjct: 172 DFQLEITQKG-VDMRIGLDIASLAERQTVNQIVMITGDSDFVPAAKHARREG 222
>gi|94312326|ref|YP_585536.1| hypothetical protein Rmet_3395 [Cupriavidus metallidurans CH34]
gi|93356178|gb|ABF10267.1| conserved hypothetical protein [Cupriavidus metallidurans CH34]
Length = 432
Score = 39.3 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 27/76 (35%), Gaps = 7/76 (9%)
Query: 99 DVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
D + +DA + + + I S D FT L + ++ + V + +
Sbjct: 80 DSAMIIDAMDLLYTGRFDGFCIVSSDSDFTRLASRIREQGLTVYGFGERKTPKPFVT--- 136
Query: 157 RRQADYFMDLAYLKNE 172
D F+ L+ +
Sbjct: 137 --ACDKFIYSDVLRAD 150
>gi|113869484|ref|YP_727973.1| hypothetical protein H16_A3546 [Ralstonia eutropha H16]
gi|113528260|emb|CAJ94605.1| uncharacterized conserved protein [Ralstonia eutropha H16]
Length = 417
Score = 39.3 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 27/76 (35%), Gaps = 7/76 (9%)
Query: 99 DVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
D + +DA + + + I S D FT L + ++ + V + +
Sbjct: 81 DSAMIIDAMDLLYTGRFDGFCIVSSDSDFTRLASRIREQGLTVYGFGERKTPKPFVT--- 137
Query: 157 RRQADYFMDLAYLKNE 172
D F+ L+ +
Sbjct: 138 --ACDKFIYSDVLRAD 151
>gi|313200777|ref|YP_004039435.1| hypothetical protein MPQ_1031 [Methylovorus sp. MP688]
gi|312440093|gb|ADQ84199.1| conserved hypothetical protein [Methylovorus sp. MP688]
Length = 280
Score = 39.3 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 36/97 (37%), Gaps = 9/97 (9%)
Query: 76 QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGCFTTLVAAL 132
+++ K A + + + K+S D L +DA + + L+ I S D FT L
Sbjct: 63 EILPKHAIQPIQQYANTKGKNSTDSALIIDAMDLLYTAP-LDGFCIVSSDSDFTRLAIRF 121
Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
+ K V + L + F+ + L
Sbjct: 122 RESGKMVYGFGEQK-----TPESLMAACNQFIYIEIL 153
>gi|302347101|ref|YP_003815399.1| hypothetical protein HMPREF0659_A7383 [Prevotella melaninogenica
ATCC 25845]
gi|302151044|gb|ADK97305.1| conserved hypothetical protein [Prevotella melaninogenica ATCC
25845]
Length = 256
Score = 39.3 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 29/175 (16%), Positives = 58/175 (33%), Gaps = 26/175 (14%)
Query: 6 EKIALFIDGANLYASSKALG---------FDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP 56
+++ + DG N Y + K + +D ++F V+ Y T
Sbjct: 44 KRVTFYFDGFNFYFALKRKKKISPEWKDFYWLDLVAFCESFLGPDQVLEKVIYFTASPLS 103
Query: 57 EQQFSPLHPLLDW---LHYNGFQVVAKVAK------EFTENCGRKRVKSSMDVELAVDAF 107
Q+ S L+ LH + F+V+ + + K + DV ++V
Sbjct: 104 PQKNSRQSAFLNANRILHSDKFEVIRGKYMSKQIECPYCKYSISKPEEKRTDVNISVRMM 163
Query: 108 E--QSEGLEHLVIFSGDGCFTTLVAALQRK--VKKVTIVSTVLSDPSMASDQLRR 158
+ + +V+ S D + + KKV + P + +L
Sbjct: 164 ADCVQDKTDVIVLISADTDLIPPLNFIHTNYPNKKVKV----FFPPGSHALELHN 214
>gi|169334288|ref|ZP_02861481.1| hypothetical protein ANASTE_00686 [Anaerofustis stercorihominis DSM
17244]
gi|169259005|gb|EDS72971.1| hypothetical protein ANASTE_00686 [Anaerofustis stercorihominis DSM
17244]
Length = 233
Score = 39.3 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 9/48 (18%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Query: 91 RKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKV 136
+ K +D+++ VD + + + +++ SGD F +R+
Sbjct: 144 DIKQKG-VDMKIGVDIASLAYKKQVSQIILISGDSDFVPAAKLARREG 190
>gi|323343191|ref|ZP_08083422.1| protein of hypothetical function DUF88 [Erysipelothrix
rhusiopathiae ATCC 19414]
gi|322463255|gb|EFY08450.1| protein of hypothetical function DUF88 [Erysipelothrix
rhusiopathiae ATCC 19414]
Length = 241
Score = 39.3 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 57/165 (34%), Gaps = 29/165 (17%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
+IA+ ID N+ + + +L+ Y GD +Q +
Sbjct: 8 RIAVLIDAENVPYA--------NIGGVLREVARYGTPTVKRIY----GDWTKQTASG--- 52
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124
W + + ++++ G K+S D + +DA + +E I S D
Sbjct: 53 --WKSHLLEHAIT-PIQQYSYTTG----KNSSDSAMIIDAMDILYEGNVESFCIVSSDSD 105
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
FT L L+ K V + + + + D F+ + +
Sbjct: 106 FTRLAVRLREAGKYVIGIGEQKTPSAFIA-----SCDKFIYIEII 145
>gi|269105290|ref|ZP_06157980.1| protein of unknown function DUF88 [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268160490|gb|EEZ38993.1| protein of unknown function DUF88 [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 222
Score = 39.3 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 37/176 (21%), Positives = 65/176 (36%), Gaps = 32/176 (18%)
Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
IALF+D N + F +LLK + I + + S H
Sbjct: 9 IALFVDADN----TSPSNFTFVIEQLLKRGQIHYRHIYGNW-------TKPCLSSWH--- 54
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE-QSEGLEHLV-IFSGDGCF 125
+V A +F + K++ D+ + VD E H++ I + D F
Sbjct: 55 --------EVGQLHAAQFIQVFDLCSHKNASDIAMVVDILEWNQSHPNHVIAIMTSDSDF 106
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
T L+ L+R ++T+ + S L++ F+ + +K I P + K
Sbjct: 107 TPLLNQLRR-----HQITTIGIGNANCSIHLQKSFSTFIPIP-VKETI--SPTKPK 154
>gi|253998702|ref|YP_003050765.1| hypothetical protein Msip34_0991 [Methylovorus sp. SIP3-4]
gi|253985381|gb|ACT50238.1| protein of unknown function DUF88 [Methylovorus sp. SIP3-4]
Length = 275
Score = 39.3 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 36/97 (37%), Gaps = 9/97 (9%)
Query: 76 QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGCFTTLVAAL 132
+++ K A + + + K+S D L +DA + + L+ I S D FT L
Sbjct: 58 EILPKHAIQPIQQYANTKGKNSTDSALIIDAMDLLYTAP-LDGFCIVSSDSDFTRLAIRF 116
Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
+ K V + L + F+ + L
Sbjct: 117 RESGKMVYGFGEQK-----TPESLMAACNQFIYIEIL 148
>gi|56476616|ref|YP_158205.1| hypothetical protein ebB63 [Aromatoleum aromaticum EbN1]
gi|56312659|emb|CAI07304.1| hypothetical protein ebB63 [Aromatoleum aromaticum EbN1]
Length = 90
Score = 39.3 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 7/41 (17%), Positives = 18/41 (43%)
Query: 98 MDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKK 138
M + L + + + + +V+ +GD F +R+ +
Sbjct: 1 MRIGLDIASLTLKKQADTIVLVAGDSDFVPAAQLARREGME 41
>gi|85703543|ref|ZP_01034647.1| hypothetical protein ROS217_22417 [Roseovarius sp. 217]
gi|85672471|gb|EAQ27328.1| hypothetical protein ROS217_22417 [Roseovarius sp. 217]
Length = 242
Score = 39.3 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 28/161 (17%), Positives = 54/161 (33%), Gaps = 41/161 (25%)
Query: 7 KIALFIDGANL--YASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
++++F+D N+ + L L +RAY ++ D
Sbjct: 14 RLSVFVDADNISVTHAQTILD--------LARRHGAPDQLRAYGNVGLLPD--------- 56
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGD 122
W GFQ + K++ D+ + +DA E S+ +++ S D
Sbjct: 57 ----WDKVPGFQFI-----------HSGSGKNATDMLMCIDAMERALSDQCAAVLLVSSD 101
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163
FT L L+ V + + + ++ R F
Sbjct: 102 QDFTHLATRLRGYGLTV-----IGAGEAKTLERFRAACSEF 137
>gi|167997905|ref|XP_001751659.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162697640|gb|EDQ83976.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 449
Score = 39.3 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 26/71 (36%), Gaps = 8/71 (11%)
Query: 80 KVAKEFTENCGR-----KRVKSSM-DVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAA 131
K +E + G K D + VD F + +V+ +GD F +
Sbjct: 60 KKVREGCQRTGVNLIDVPNGKKDAADKAILVDMFLFALDNPCSTIVLVTGDVDFAPALHK 119
Query: 132 LQRKVKKVTIV 142
L ++ V +V
Sbjct: 120 LGQRGYVVILV 130
>gi|259506035|ref|ZP_05748937.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
gi|259166392|gb|EEW50946.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
Length = 247
Score = 39.3 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 9/52 (17%), Positives = 21/52 (40%), Gaps = 3/52 (5%)
Query: 87 ENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136
+ K +D+ + +D +E + +V+ +GD F +R+
Sbjct: 138 DFQLEITQKG-VDMRIGLDIASLAERQTVNQIVMITGDSDFVPAAKHARREG 188
>gi|325855713|ref|ZP_08171904.1| hypothetical protein HMPREF9303_0369 [Prevotella denticola CRIS
18C-A]
gi|325483766|gb|EGC86728.1| hypothetical protein HMPREF9303_0369 [Prevotella denticola CRIS
18C-A]
Length = 260
Score = 39.3 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 33/90 (36%), Gaps = 11/90 (12%)
Query: 99 DVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
D + +DA + + I S D FT L L+ K V + +
Sbjct: 78 DSAMIIDAMDILHGGDCDGFCIVSSDSDFTRLATRLRESGKYVIGIGEQKTPQPF----- 132
Query: 157 RRQADYFMDLAYLK----NEIARDPDEDKK 182
D F+ + L+ NEI ++ + K+
Sbjct: 133 IVSCDKFIYIEILETINANEIKKEDNTAKR 162
>gi|301117798|ref|XP_002906627.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262107976|gb|EEY66028.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 173
Score = 39.3 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 46/116 (39%), Gaps = 12/116 (10%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL--- 63
+ AL IDG+ ++ALG IDY KL A +A + Q+ +P
Sbjct: 18 RAALIIDGSYAMIGARALGGKIDYIKLRSALEDQASTQFGDCWFFDQNPSAQRVNPALTA 77
Query: 64 -HPLLDWLHYNG--FQVVAKVAKEFT------ENCGRKRVKSSMDVELAVDAFEQS 110
+ +L + +G FQV K++ N + V+ +D +A +
Sbjct: 78 EYHMLKFAPPDGPQFQVSLFPMKKYNCHCRRCGNHFTQNVQKGVDNGIATKILSLA 133
>gi|330880020|gb|EGH14169.1| hypothetical protein PSYMP_26883 [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
Length = 229
Score = 39.3 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 26/166 (15%), Positives = 54/166 (32%), Gaps = 39/166 (23%)
Query: 7 KIALFIDGANLYA---SSKALGFDIDYRKLLKA---FRSRAIVIRA--YYYTTVVGDPEQ 58
+ A F+DG NL+ + + +D LL + A ++ T V+
Sbjct: 2 RTACFVDGYNLFYGLLAGTPYKW-LDLPSLLAHIIRVEYPDNTLDAVSFFTTGVMPTLAT 60
Query: 59 Q----FSPLHPLLDWLHYNGFQVV-------AKVAKEFTENCG----------RKRVKSS 97
+ + L G +V+ + A F + K +
Sbjct: 61 RGTLSKEAQDTYVRALKVRGVEVLYGRHQLEPRNAPRFVDKDTPASRADQVGIWKLEEKE 120
Query: 98 MDVELAVDAFEQSE---------GLEHLVIFSGDGCFTTLVAALQR 134
DV +A+ + + ++ +V+ S D T + A++
Sbjct: 121 TDVHIAISMYRLASRQMALPPEARIQQIVLVSADTDMTPSLRAIRE 166
>gi|237714047|ref|ZP_04544528.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262407099|ref|ZP_06083648.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294644732|ref|ZP_06722480.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a]
gi|229445871|gb|EEO51662.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262355802|gb|EEZ04893.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292639941|gb|EFF58211.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a]
Length = 122
Score = 39.3 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 16/119 (13%), Positives = 38/119 (31%), Gaps = 11/119 (9%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDY-----RKLLKAFRSRAIVIRAYYYTTVVGDPE 57
+ ++K+ +++DG N Y K+ + + Y +S ++ Y++ D
Sbjct: 2 EDKKKVIVYVDGFNFYYGLKSKKWKMCYWLDLVSFFNSFLKSYQELVEVNYFSARPTDAG 61
Query: 58 QQFSPLHPLLDWLHYNGFQVVA-----KVAK-EFTENCGRKRVKSSMDVELAVDAFEQS 110
+ F ++ K K + + DV +A +
Sbjct: 62 KHDRQDKLFQANKCNPKFNLILGKYLKKEIKCRYCGGIIHSFEEKETDVRIATKILSDA 120
>gi|189210104|ref|XP_001941384.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187977477|gb|EDU44103.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 260
Score = 39.3 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 33/89 (37%), Gaps = 7/89 (7%)
Query: 81 VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVT 140
++F G+ +M ++ A+D + L + S D FT L A ++ + VT
Sbjct: 63 PIQQFAYTTGKNVTDGAMIID-AMDLL-YTGRLSSFCLVSSDSDFTRLAARIREQG--VT 118
Query: 141 IVSTVLSDPSMASDQLRRQADYFMDLAYL 169
+ ++ D FM L
Sbjct: 119 VYGFGERK---TNNAFIAACDKFMYFDVL 144
>gi|227549577|ref|ZP_03979626.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM
44291]
gi|227078341|gb|EEI16304.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM
44291]
Length = 177
Score = 39.3 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 25/77 (32%), Gaps = 15/77 (19%)
Query: 74 GFQVVAKVAK------------EFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIF 119
G+ + K + + K +D+ + +D +E + +V+
Sbjct: 48 GYTLRDGPLKKLCRGAISVEDLQEHDFVLEISQKG-VDMRIGLDIASLAERGLVNQIVMI 106
Query: 120 SGDGCFTTLVAALQRKV 136
SGD F +R
Sbjct: 107 SGDSDFVPAAKHARRSG 123
>gi|156744147|ref|YP_001434276.1| hypothetical protein Rcas_4231 [Roseiflexus castenholzii DSM 13941]
gi|156235475|gb|ABU60258.1| hypothetical protein Rcas_4231 [Roseiflexus castenholzii DSM 13941]
Length = 206
Score = 39.3 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 4/64 (6%)
Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
GL+ VI SGDG F L L K V + S + + D F+ + +
Sbjct: 13 PGLDVFVIVSGDGGFAALAKKLHEYGKTV----IGCAYRSAVNKTFQAVCDEFVWITDPE 68
Query: 171 NEIA 174
++
Sbjct: 69 EKVQ 72
>gi|289668076|ref|ZP_06489151.1| hypothetical protein XcampmN_06148 [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 250
Score = 39.0 bits (90), Expect = 0.26, Method: Composition-based stats.
Identities = 38/222 (17%), Positives = 73/222 (32%), Gaps = 50/222 (22%)
Query: 8 IALFIDGANLYAS---SKALGFDID----YRKLLKAFRSRAIVIRAYYYTT-----VVGD 55
A++IDG NLY A + +D + +LL ++ Y+T +
Sbjct: 7 TAVYIDGYNLYYGRIRGTAFKW-LDVVALFDRLLHDQDPSTELLHVRYFTAPALGRFATN 65
Query: 56 PEQQFSPLHPLLDWLHY-NGFQVVAKVAKEFTENCG--------------------RKRV 94
+ L L + + + + K + G K
Sbjct: 66 KQASEIAQTTYLRALAHTHPQRFTTTLGKHSWDKGGAFLAEFVSGQPYDRTRRVRVWKLE 125
Query: 95 KSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTI-VSTVLSDP-- 149
+ DV LA+ + + + LV+ S D ++ A++ + + V T+ P
Sbjct: 126 EKQTDVNLALAMYRDAASAQYQQLVVCSNDSDIEPVLTAIREDFPTIVLGVVTLRRQPVE 185
Query: 150 ----SMASDQLRRQAD---YFMDLAYLK----NEIARDPDED 180
S L +AD +++ + L E R P +
Sbjct: 186 GESDRRVSASLSSRADWTRHYILDSELAAAQLPERVRKPGKP 227
>gi|51209447|ref|YP_063410.1| cpp15 [Campylobacter coli]
gi|39979655|gb|AAR29499.1| cpp15 [Campylobacter coli]
gi|315059224|gb|ADT73552.1| cpp15 [Campylobacter jejuni subsp. jejuni S3]
Length = 242
Score = 39.0 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 17/114 (14%), Positives = 37/114 (32%), Gaps = 10/114 (8%)
Query: 31 RKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCG 90
+LL R + Y V + S D+ + E T
Sbjct: 103 SELLNHLRKQP-------YFAVRLGEIDENSFQWKFRDYDKFRKILRKEIDICELTSEDF 155
Query: 91 RKRVK-SSMDVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTI 141
+K +D+++ +D + E +++ + D F V +++ V +
Sbjct: 156 VLDIKQKGVDMKIGLDIATLANKHHAEKIILITADSDFIPAVKHARKEGIIVQL 209
>gi|288573726|ref|ZP_06392083.1| protein of unknown function DUF88 [Dethiosulfovibrio peptidovorans
DSM 11002]
gi|288569467|gb|EFC91024.1| protein of unknown function DUF88 [Dethiosulfovibrio peptidovorans
DSM 11002]
Length = 274
Score = 39.0 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 27/86 (31%), Gaps = 7/86 (8%)
Query: 99 DVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
D + +DA + + + + S D FT L A ++ V + S
Sbjct: 80 DSAMIIDAMDLLFTNRFDGFCLVSSDSDFTRLAARIREAGLMVYGFGEKKTPKPFVS--- 136
Query: 157 RRQADYFMDLAYLKNEIARDPDEDKK 182
D F+ + P K+
Sbjct: 137 --ACDKFIYTEVISVNKEDSPSAIKR 160
>gi|320537841|ref|ZP_08037758.1| hypothetical protein HMPREF9554_02512 [Treponema phagedenis F0421]
gi|320145310|gb|EFW37009.1| hypothetical protein HMPREF9554_02512 [Treponema phagedenis F0421]
Length = 250
Score = 39.0 bits (90), Expect = 0.27, Method: Composition-based stats.
Identities = 10/53 (18%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Query: 86 TENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136
T+ R K +D+++ +D + + +V+ +GD F +R+
Sbjct: 151 TDFDLVLRQKG-VDMKIGIDIATLAYKKLADQIVLITGDSDFVPAAKLARREG 202
>gi|225175633|ref|ZP_03729627.1| conserved hypothetical protein [Dethiobacter alkaliphilus AHT 1]
gi|225168962|gb|EEG77762.1| conserved hypothetical protein [Dethiobacter alkaliphilus AHT 1]
Length = 246
Score = 39.0 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 36/181 (19%), Positives = 61/181 (33%), Gaps = 30/181 (16%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
+ KIA+ ID N+ S K + + D + Y + Q +P
Sbjct: 2 ENDRKIAVLIDADNV--SEKYIKYIFD------EISNHGTPTYKRIY---GDWTKPQLTP 50
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
+L + + ++++ G+ D L +DA + SE ++ I S
Sbjct: 51 WKNVL-----LNYSIT--PIQQYSYTTGKNAT----DAALIIDAMDILYSENVDGFCIVS 99
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
D FT L A L+ V + + + + F L L I DE
Sbjct: 100 SDSDFTKLAARLREAGMYVIGMGEKKTPTPFIA-----ACEKFKYLEVLAA-IPAASDEP 153
Query: 181 K 181
K
Sbjct: 154 K 154
>gi|281415100|ref|ZP_06246842.1| hypothetical protein MlutN2_07862 [Micrococcus luteus NCTC 2665]
Length = 162
Score = 39.0 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 27/76 (35%), Gaps = 13/76 (17%)
Query: 74 GFQVVAKVAKEF------------TENCGRKRVKS-SMDVELAVDAFEQSEGLEHLVIFS 120
G+Q+ A+ K+ + K M V L + A +E + +++ S
Sbjct: 27 GYQIKAQPLKKLLRGEISVADLEADDFLLDITQKGVDMRVGLDIAALAATEPVNQIIMIS 86
Query: 121 GDGCFTTLVAALQRKV 136
GD F +R
Sbjct: 87 GDSDFVPAGKHARRSG 102
>gi|227876363|ref|ZP_03994475.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35243]
gi|269975928|ref|ZP_06182932.1| conserved hypothetical protein [Mobiluncus mulieris 28-1]
gi|306817255|ref|ZP_07451001.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239]
gi|307700454|ref|ZP_07637493.1| conserved hypothetical protein [Mobiluncus mulieris FB024-16]
gi|227842904|gb|EEJ53101.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35243]
gi|269935756|gb|EEZ92286.1| conserved hypothetical protein [Mobiluncus mulieris 28-1]
gi|304649935|gb|EFM47214.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239]
gi|307614439|gb|EFN93669.1| conserved hypothetical protein [Mobiluncus mulieris FB024-16]
Length = 191
Score = 39.0 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 7/78 (8%)
Query: 98 MDVEL--AVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQ 155
+DV + +DA + G ++V+ S DG F + L R +V +V S +
Sbjct: 95 VDVGIQRTLDAIA-ARGEGNIVLVSHDGDFEPQLQTLLRNGHRVAVVGF----DEFLSGE 149
Query: 156 LRRQADYFMDLAYLKNEI 173
LR + + + L+ EI
Sbjct: 150 LRSLEEQGLKIIDLEREI 167
>gi|239918681|ref|YP_002958239.1| hypothetical protein Mlut_22170 [Micrococcus luteus NCTC 2665]
gi|239839888|gb|ACS31685.1| hypothetical protein Mlut_22170 [Micrococcus luteus NCTC 2665]
Length = 247
Score = 39.0 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 27/76 (35%), Gaps = 13/76 (17%)
Query: 74 GFQVVAKVAKEF------------TENCGRKRVKS-SMDVELAVDAFEQSEGLEHLVIFS 120
G+Q+ A+ K+ + K M V L + A +E + +++ S
Sbjct: 112 GYQIKAQPLKKLLRGEISVADLEADDFLLDITQKGVDMRVGLDIAALAATEPVNQIIMIS 171
Query: 121 GDGCFTTLVAALQRKV 136
GD F +R
Sbjct: 172 GDSDFVPAGKHARRSG 187
>gi|300780304|ref|ZP_07090160.1| conserved hypothetical protein [Corynebacterium genitalium ATCC
33030]
gi|300534414|gb|EFK55473.1| conserved hypothetical protein [Corynebacterium genitalium ATCC
33030]
Length = 223
Score = 39.0 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 37/151 (24%), Positives = 55/151 (36%), Gaps = 28/151 (18%)
Query: 34 LKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKR 93
L A R I A +T V + P ++ L GF V AK
Sbjct: 65 LSARTGRRIEPEATVFTNVSPGSADV---VRPWVEALRNVGFAVFAKP------------ 109
Query: 94 VKSSMDVELAVDAFEQSEG------LEHLVIFSGDG-CFTTLVAALQRKVKKVTIVSTVL 146
K+ D ++ + E E L+ +V+ S DG F L+ L + +TVL
Sbjct: 110 -KADDDSDVDGEMIEHIERRRAEGVLQGVVVASADGQNFHELLDELSADG----LPATVL 164
Query: 147 SDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
AS + A F+DL + R+P
Sbjct: 165 GFHEHASWAVTSPAITFVDLEDIPGVF-REP 194
>gi|325972567|ref|YP_004248758.1| hypothetical protein SpiBuddy_2755 [Spirochaeta sp. Buddy]
gi|324027805|gb|ADY14564.1| Domain of unknown function DUF88 [Spirochaeta sp. Buddy]
Length = 266
Score = 39.0 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 91 RKRVKSSMDVELAVDAFEQ----SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS 143
K+ D+ ++++A E + ++ V + D FT ++ AL++ K+V +V+
Sbjct: 75 TTNYKNRADLIISLEALETIIINTPVIDRYVFITSDSDFTVIMEALRKYGKEVYLVT 131
>gi|319955340|ref|YP_004166607.1| 2,4-dienoyl-CoA reductase [Cellulophaga algicola DSM 14237]
gi|319424000|gb|ADV51109.1| 2,4-dienoyl-CoA reductase [Cellulophaga algicola DSM 14237]
Length = 675
Score = 39.0 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 22/51 (43%)
Query: 112 GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162
++ +VI +G F L+ LQ K KV ++ + + + QA
Sbjct: 620 KVDTVVICAGQVPFKELLEPLQAKGIKVHVIGGADVAAELDAKRAIHQACR 670
>gi|162447870|ref|YP_001621002.1| hypothetical protein ACL_1016 [Acholeplasma laidlawii PG-8A]
gi|161985977|gb|ABX81626.1| conserved hypothetical protein [Acholeplasma laidlawii PG-8A]
Length = 242
Score = 39.0 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 54/178 (30%), Gaps = 32/178 (17%)
Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
IAL ID N+ I ++ + A Y + + +
Sbjct: 9 IALLIDADNI--------SPIYLDIIINEANKHGKITNARVYGDWSQERLKTWRSK---- 56
Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSM-DVELAVDAFEQ--SEGLEHLVIFSGDGC 124
K + F + K + D L +DA + S + I S D
Sbjct: 57 ----------AEKFSLTFVQQYANLSNKGNATDFTLVIDAMDLLYSNKVNAFCIVSSDSD 106
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182
FT L+ L+ + + S + L + F + + + P +++K
Sbjct: 107 FTKLIIRLKE-----DNMYLIGMGESKTPEVLVNSYERFYYIDQILEALE--PKKERK 157
>gi|167838348|ref|ZP_02465207.1| hypothetical protein Bpse38_17705 [Burkholderia thailandensis
MSMB43]
Length = 172
Score = 39.0 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 8/53 (15%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Query: 86 TENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKV 136
++ + +D+ + VD + + ++ +V+ +GD F +R+
Sbjct: 69 PDDVVVDVRQKGVDMRIGVDVSSLAFKKQVDQIVLVAGDADFVPAAKQARREG 121
>gi|227551254|ref|ZP_03981303.1| phosphoribosylaminoimidazole carboxylase [Enterococcus faecium
TX1330]
gi|227179594|gb|EEI60566.1| phosphoribosylaminoimidazole carboxylase [Enterococcus faecium
TX1330]
Length = 377
Score = 39.0 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 50/146 (34%), Gaps = 28/146 (19%)
Query: 31 RKLLKA-FRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC 89
+LL+ F ++ A Y T V + D + G+ V K + +
Sbjct: 109 DRLLEKSFLETNNIVIAPYATIVSPTD---------IQDAIDGIGYPCVLKTTRGGYDGK 159
Query: 90 GRKRVKSSMDVELAVDAFEQSEGLEHLVI-----------FSGDGCFT--TLVAALQRKV 136
G+ +KS D+ A+D + + I +G G FT +V + R
Sbjct: 160 GQYVLKSRADLAPAMDLLREGTCVLEAWIPFEKEISIMVAGNGQGDFTTFPVVENIHRNN 219
Query: 137 KKVTIVSTVLSDPSMASDQLRRQADY 162
++ P+ + +A+
Sbjct: 220 ILHETIA-----PAAIDQDVIEEAER 240
>gi|331682212|ref|ZP_08382834.1| conserved hypothetical protein [Escherichia coli H299]
gi|331080636|gb|EGI51812.1| conserved hypothetical protein [Escherichia coli H299]
Length = 285
Score = 39.0 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 8/41 (19%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 98 MDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136
+D++L +D + ++ +V+ +GD F + K
Sbjct: 163 VDIKLGMDITTLAYEKLVDVIVLVAGDSDFVPAAKHARIKG 203
>gi|257887629|ref|ZP_05667282.1| phosphoribosylaminoimidazole carboxylase [Enterococcus faecium
1,141,733]
gi|257896124|ref|ZP_05675777.1| phosphoribosylaminoimidazole carboxylase [Enterococcus faecium
Com12]
gi|257823683|gb|EEV50615.1| phosphoribosylaminoimidazole carboxylase [Enterococcus faecium
1,141,733]
gi|257832689|gb|EEV59110.1| phosphoribosylaminoimidazole carboxylase [Enterococcus faecium
Com12]
Length = 374
Score = 39.0 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 50/146 (34%), Gaps = 28/146 (19%)
Query: 31 RKLLKA-FRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC 89
+LL+ F ++ A Y T V + D + G+ V K + +
Sbjct: 106 DRLLEKSFLETNNIVIAPYATIVSPTD---------IQDAIDGIGYPCVLKTTRGGYDGK 156
Query: 90 GRKRVKSSMDVELAVDAFEQSEGLEHLVI-----------FSGDGCFT--TLVAALQRKV 136
G+ +KS D+ A+D + + I +G G FT +V + R
Sbjct: 157 GQYVLKSRADLAPAMDLLREGTCVLEAWIPFEKEISIMVAGNGQGDFTTFPVVENIHRNN 216
Query: 137 KKVTIVSTVLSDPSMASDQLRRQADY 162
++ P+ + +A+
Sbjct: 217 ILHETIA-----PAAIDQDVIEEAER 237
>gi|261367119|ref|ZP_05980002.1| conserved hypothetical protein [Subdoligranulum variabile DSM
15176]
gi|282571242|gb|EFB76777.1| conserved hypothetical protein [Subdoligranulum variabile DSM
15176]
Length = 275
Score = 39.0 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 32/168 (19%), Positives = 55/168 (32%), Gaps = 29/168 (17%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
K+A+ ID N+ S K + + +L S + Y + L
Sbjct: 5 KLAILIDADNI--SPKYV------KVILDEAASFGVAACKRIY------GDWSDVRLKSW 50
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124
D L N ++++ G+ D + +DA + L+ I S D
Sbjct: 51 KDALLNNSII----PIQQYSYTTGKNAT----DSAMIIDAMDLLYGGNLDGFCIVSSDSD 102
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
FT L A L+ K V + + + D F L + +
Sbjct: 103 FTRLAARLREAGKLVIGMGESKALGPFV-----KACDQFKYLDLILDH 145
>gi|21282108|ref|NP_645196.1| hypothetical protein MW0379 [Staphylococcus aureus subsp. aureus
MW2]
gi|300911084|ref|ZP_07128533.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
TCH70]
gi|21203544|dbj|BAB94244.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MW2]
gi|300887263|gb|EFK82459.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
TCH70]
Length = 229
Score = 39.0 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 11/79 (13%), Positives = 27/79 (34%), Gaps = 3/79 (3%)
Query: 87 ENCGRKRVKS-SMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTV 145
+ + K M + L + + ++ +++ +GD F + + + S
Sbjct: 140 DFSLSLQQKGVDMKIGLDIASLSFKHQVDKIILIAGDSDFVPAAKLARTEGIDFVLDSLG 199
Query: 146 LSDPSMASDQL--RRQADY 162
+ S + RR D
Sbjct: 200 ADIRNNLSLHIDGRRTCDE 218
>gi|145301490|ref|YP_001144329.1| hypothetical protein ASA_P5G111 [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142856372|gb|ABO92581.1| conserved hypothetical protein [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 240
Score = 39.0 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 8/48 (16%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Query: 96 SSMDVELAVDA--FEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTI 141
+D++L +D + + +V+ SGD F + + +
Sbjct: 148 KGVDMKLGLDIATLTLKKQVNKIVLISGDSDFVPAAKLARAEGVHFVL 195
>gi|293552837|ref|ZP_06673495.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
[Enterococcus faecium E1039]
gi|291602971|gb|EFF33165.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
[Enterococcus faecium E1039]
Length = 377
Score = 39.0 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 25/146 (17%), Positives = 50/146 (34%), Gaps = 28/146 (19%)
Query: 31 RKLLKA-FRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC 89
+LL+ F ++ A Y T V + D + G+ V K + +
Sbjct: 109 DRLLEKSFLETNNIVIAPYATIVSPTD---------IQDAIDGIGYPCVLKTTRGGYDGK 159
Query: 90 GRKRVKSSMDVELAVDAFEQSEGLEHLVI-----------FSGDGCFT--TLVAALQRKV 136
G+ +KS +D+ A+D + + I +G G FT +V +
Sbjct: 160 GQYVLKSRVDLAPAMDLLREGTCVLEAWIPFEKEISIMVAGNGQGDFTTFPVVENIHHNN 219
Query: 137 KKVTIVSTVLSDPSMASDQLRRQADY 162
++ P+ + +A+
Sbjct: 220 ILHETIA-----PAAIDQDVIEEAER 240
>gi|302692512|ref|XP_003035935.1| hypothetical protein SCHCODRAFT_105536 [Schizophyllum commune H4-8]
gi|300109631|gb|EFJ01033.1| hypothetical protein SCHCODRAFT_105536 [Schizophyllum commune H4-8]
Length = 701
Score = 38.6 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 48/133 (36%), Gaps = 20/133 (15%)
Query: 14 GANLYASSKALGFDIDYRKLLKAFRSRAIVIRAY-YYTTVVGDPEQQFSPLHPLLDWLHY 72
N + + GFDI K ++ + A+ Y Q + + L L
Sbjct: 6 VENCHFTGGCSGFDI--AKNIERVALPHGSVTAFNAYL-----DPQLCTISNNLRSELQS 58
Query: 73 NGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLV 129
+G ++ +C K+++D L D + LV+ SGD F
Sbjct: 59 SGVALI---------DCPHNGQKNAVDQMLQTDILLFALDNPAPATLVLISGDRDFAYTA 109
Query: 130 AALQRKVKKVTIV 142
A L+R+ V ++
Sbjct: 110 AVLRRRHYNVILI 122
>gi|293571980|ref|ZP_06682994.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
[Enterococcus faecium E980]
gi|291607998|gb|EFF37306.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
[Enterococcus faecium E980]
Length = 370
Score = 38.6 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 50/146 (34%), Gaps = 28/146 (19%)
Query: 31 RKLLKA-FRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC 89
+LL+ F ++ A Y T V + D + G+ V K + +
Sbjct: 102 DRLLEKSFLETNNIVIAPYATIVSPTD---------IQDAIDGIGYPCVLKTTRGGYDGK 152
Query: 90 GRKRVKSSMDVELAVDAFEQSEGLEHLVI-----------FSGDGCFT--TLVAALQRKV 136
G+ +KS D+ A+D + + I +G G FT +V + R
Sbjct: 153 GQYVLKSRADLAPAMDLLREGTCVLEAWIPFEKEISIMVAGNGQGDFTTFPVVENIHRNN 212
Query: 137 KKVTIVSTVLSDPSMASDQLRRQADY 162
++ P+ + +A+
Sbjct: 213 ILHETIA-----PAAIDQDVIEEAER 233
>gi|241554076|ref|YP_002979289.1| protein of unknown function DUF88 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240863382|gb|ACS61044.1| protein of unknown function DUF88 [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 262
Score = 38.6 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 34/103 (33%), Gaps = 8/103 (7%)
Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKK 138
+ ++F G+ +M ++ A+D + I S D F L + ++ +
Sbjct: 61 IQPVQQFAYTTGKNATDGAMIID-AMDLL-YTGRFSAFCIVSSDSDFARLASRIREQGVT 118
Query: 139 VTIVSTVLSDPSMASDQLRRQADYFMDLAYL-KNEIARDPDED 180
V + D F+ L N + D +D
Sbjct: 119 VYGFGERKTPRPF-----ITACDKFVYFDVLNANSVESDLRQD 156
>gi|293377001|ref|ZP_06623212.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
[Enterococcus faecium PC4.1]
gi|292644370|gb|EFF62469.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
[Enterococcus faecium PC4.1]
Length = 370
Score = 38.6 bits (89), Expect = 0.34, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 50/146 (34%), Gaps = 28/146 (19%)
Query: 31 RKLLKA-FRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC 89
+LL+ F ++ A Y T V + D + G+ V K + +
Sbjct: 102 DRLLEKSFLETNNIVIAPYATIVSPTD---------IQDAIDGIGYPCVLKTTRGGYDGK 152
Query: 90 GRKRVKSSMDVELAVDAFEQSEGLEHLVI-----------FSGDGCFT--TLVAALQRKV 136
G+ +KS D+ A+D + + I +G G FT +V + R
Sbjct: 153 GQYVLKSRADLAPAMDLLREGTCVLEAWIPFEKEISIMVAGNGQGDFTTFPVVENIHRNN 212
Query: 137 KKVTIVSTVLSDPSMASDQLRRQADY 162
++ P+ + +A+
Sbjct: 213 ILHETIA-----PAAIDQDVIEEAER 233
>gi|290983351|ref|XP_002674392.1| predicted protein [Naegleria gruberi]
gi|284087982|gb|EFC41648.1| predicted protein [Naegleria gruberi]
Length = 650
Score = 38.6 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Query: 99 DVELAVDAFEQSEG---LEHLVIFSGDGCFTTLVAALQRKVKK 138
D+ L ++ + E + +I S D F +V A++ + K+
Sbjct: 314 DIALTIEVIKDLERKKPFDVFIIASSDSDFVPVVKAIRDEGKE 356
>gi|268324239|emb|CBH37827.1| chemotaxis response regulator protein-glutamate methylesterase
[uncultured archaeon]
Length = 339
Score = 38.6 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 49/131 (37%), Gaps = 18/131 (13%)
Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAK-EFTENCGRKRVKSSMDVELAVDAFEQSEG 112
+ P H + +G+ V K + + V+ S+DV ++ +E
Sbjct: 216 AEDNDLIKPGHAF---IAPSGYHTVVKKGRIKLNTRPKENSVRPSIDVAMS----SAAEA 268
Query: 113 L-EHL--VIFSGDG-CFTTLVAALQRKVKKV----TIVSTVLSDPSMASDQLRRQADYFM 164
+ + V+ SG G + A++ + K + S + P A+ + D +
Sbjct: 269 YRDKVIGVLLSGMGKDGAEGMKAIKERGGKTIAQDELTSVIFGMPK-AAIE-MDAVDKVV 326
Query: 165 DLAYLKNEIAR 175
L + +EI R
Sbjct: 327 PLPDIVDEIMR 337
>gi|117921344|ref|YP_870536.1| inorganic polyphosphate/ATP-NAD kinase [Shewanella sp. ANA-3]
gi|189037393|sp|A0KZB1|PPNK_SHESA RecName: Full=Probable inorganic polyphosphate/ATP-NAD kinase;
Short=Poly(P)/ATP NAD kinase
gi|117613676|gb|ABK49130.1| ATP-NAD/AcoX kinase [Shewanella sp. ANA-3]
Length = 309
Score = 38.6 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 25/79 (31%), Gaps = 10/79 (12%)
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L L WL G++V+ + G +AVD E + ++
Sbjct: 38 QTLKRLHHWLTVQGYEVLVEE--RVASELGTNI--------IAVDLLEIGARCDLAIVVG 87
Query: 121 GDGCFTTLVAALQRKVKKV 139
GDG L R V
Sbjct: 88 GDGNMLGAARVLARFDVGV 106
>gi|134288743|ref|YP_001111040.1| gp9, Cpp15 [Burkholderia phage phiE202]
gi|134131956|gb|ABO60704.1| gp9, Cpp15 [Burkholderia phage phiE202]
Length = 251
Score = 38.6 bits (89), Expect = 0.37, Method: Composition-based stats.
Identities = 9/52 (17%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Query: 87 ENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKV 136
+ R K +D+ + +D + + ++ +V+ +GD F +R+
Sbjct: 155 DVMVDVRQKG-VDMRIGLDVSSLAFKKQVDQIVLIAGDADFVPAAKQARREG 205
>gi|317145182|ref|XP_001820499.2| hypothetical protein AOR_1_2934154 [Aspergillus oryzae RIB40]
Length = 258
Score = 38.6 bits (89), Expect = 0.38, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 49/165 (29%), Gaps = 29/165 (17%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
K+ + ID N +++ +D LL Y + + L
Sbjct: 8 KLVVLIDADN----ARS--SVVDP--LLSEIAKYGTAHAKRAY------GDWTRTNLQGW 53
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124
D L K + + + K++ D + +DA + S + + S D
Sbjct: 54 KDQL--------LKQSIQPIQQFAYTHGKNATDSAMIIDAMDLLYSSRYDGFCLVSSDSD 105
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
FT L A ++ V + + F+ L
Sbjct: 106 FTRLAARIRESGLIVYGFGENHTPKPFVA-----ACSKFIYTENL 145
>gi|49485284|ref|YP_042505.1| hypothetical protein SAS0381 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|297209084|ref|ZP_06925483.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ATCC 51811]
gi|49243727|emb|CAG42152.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|296886017|gb|EFH24951.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ATCC 51811]
Length = 229
Score = 38.6 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 11/79 (13%), Positives = 27/79 (34%), Gaps = 3/79 (3%)
Query: 87 ENCGRKRVKS-SMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTV 145
+ + K M + L + + ++ +++ +GD F + + + S
Sbjct: 140 DFSLSLQQKGVDMKIGLDIASLSFKHQVDKIILIAGDSDFVPAAKLARTEGIDFVLDSLG 199
Query: 146 LSDPSMASDQL--RRQADY 162
+ S + RR D
Sbjct: 200 ADIRNNLSLHIDGRRTCDE 218
>gi|210633171|ref|ZP_03297707.1| hypothetical protein COLSTE_01620 [Collinsella stercoris DSM 13279]
gi|210159211|gb|EEA90182.1| hypothetical protein COLSTE_01620 [Collinsella stercoris DSM 13279]
Length = 175
Score = 38.6 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 27/73 (36%), Gaps = 7/73 (9%)
Query: 99 DVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
D + +DA + S ++ I S D FT LVA L+ V + + S
Sbjct: 79 DSAMIIDAMDILYSGTVDGFAIVSSDSDFTRLVARLRESGMVVIGMGEQKTPKPFIS--- 135
Query: 157 RRQADYFMDLAYL 169
+ F L L
Sbjct: 136 --ACNQFKYLDLL 146
>gi|298693751|gb|ADI96973.1| hypothetical protein SAOV_0437 [Staphylococcus aureus subsp. aureus
ED133]
Length = 229
Score = 38.6 bits (89), Expect = 0.40, Method: Composition-based stats.
Identities = 11/79 (13%), Positives = 27/79 (34%), Gaps = 3/79 (3%)
Query: 87 ENCGRKRVKS-SMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTV 145
+ + K M + L + + ++ +++ +GD F + + + S
Sbjct: 140 DFSLSLQQKGVDMKIGLDIASLSFKHQVDKIILIAGDSDFVPAAKLARTEGIDFVLDSLG 199
Query: 146 LSDPSMASDQL--RRQADY 162
+ S + RR D
Sbjct: 200 ADIRNNLSLHIDGRRTCDE 218
>gi|218132405|ref|ZP_03461209.1| hypothetical protein BACPEC_00264 [Bacteroides pectinophilus ATCC
43243]
gi|217992743|gb|EEC58745.1| hypothetical protein BACPEC_00264 [Bacteroides pectinophilus ATCC
43243]
Length = 251
Score = 38.6 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 63/169 (37%), Gaps = 21/169 (12%)
Query: 3 DPREKIALFIDGANLYASSKALGFDI--DYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
+ + A+F+D + + F + ++ + ++ ++ + + V GD ++
Sbjct: 7 SSKPRAAVFVDYEHWFY-GYHNNFHMRPNFEEWIQELKNEYDIDELH----VFGDFSERQ 61
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLV 117
L L + T + K DV + + + + + V
Sbjct: 62 IGAE--LPELQR-----ITNNNVTHTASDKLGVDKDFTDVIILDHIYRSAAKKKSADVYV 114
Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
+F+GD FT +V L+ KKV I S+ L+ A ++++
Sbjct: 115 LFTGDAHFTCVVDYLKELNKKVVIYGVKFGF----SNALKSAATSYVEM 159
>gi|218128838|ref|ZP_03457642.1| hypothetical protein BACEGG_00410 [Bacteroides eggerthii DSM 20697]
gi|217989066|gb|EEC55382.1| hypothetical protein BACEGG_00410 [Bacteroides eggerthii DSM 20697]
Length = 234
Score = 38.6 bits (89), Expect = 0.41, Method: Composition-based stats.
Identities = 12/68 (17%), Positives = 25/68 (36%), Gaps = 7/68 (10%)
Query: 99 DVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
D+ L +DA + ++ + + DG ++ L ++ KV + L
Sbjct: 80 DIALVIDAMDILRDGQVDCFCLVASDGDYSLLAQRIREAGVKV-----LGYGEGKTPVSL 134
Query: 157 RRQADYFM 164
R F+
Sbjct: 135 VRSCSVFL 142
>gi|154315023|ref|XP_001556835.1| hypothetical protein BC1G_04853 [Botryotinia fuckeliana B05.10]
gi|150848391|gb|EDN23584.1| hypothetical protein BC1G_04853 [Botryotinia fuckeliana B05.10]
Length = 270
Score = 38.6 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 19/48 (39%), Gaps = 6/48 (12%)
Query: 113 LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160
+ LV+ S D F LV L RK + +V + S L R
Sbjct: 150 YDWLVLISDDTDFGDLVKRLSRKGVRTIVVGSKP------SRNLVRAT 191
>gi|313676381|ref|YP_004054377.1| hypothetical protein Ftrac_2290 [Marivirga tractuosa DSM 4126]
gi|312943079|gb|ADR22269.1| hypothetical protein Ftrac_2290 [Marivirga tractuosa DSM 4126]
Length = 242
Score = 38.6 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 36/103 (34%), Gaps = 7/103 (6%)
Query: 82 AKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKV 139
A + G K++ D + +DA + S+ + + S D FT L L+ KV
Sbjct: 57 AITPIQQYGYTTGKNATDSAMIIDAMDILYSQKVHGFCLVSSDSDFTRLATRLREAGMKV 116
Query: 140 TIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182
+ + D F+ + L N+ D K
Sbjct: 117 YGIGEKKTPNPF-----IVACDKFIYIEILNNQAEETEDTKSK 154
>gi|302883636|ref|XP_003040717.1| hypothetical protein NECHADRAFT_67900 [Nectria haematococca mpVI
77-13-4]
gi|256721607|gb|EEU35004.1| hypothetical protein NECHADRAFT_67900 [Nectria haematococca mpVI
77-13-4]
Length = 434
Score = 38.6 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 30/167 (17%), Positives = 54/167 (32%), Gaps = 42/167 (25%)
Query: 10 LFIDGANLYAS-SKALGF--------------DID---YRKLLKAFRSRAIVIRAYYYTT 51
+FID +N+ KAL ++ + KLL R +
Sbjct: 240 VFIDMSNIIIGFQKALRARYSLPESVRFIPLPQMNLEFFHKLLVRDRHAEWL-------- 291
Query: 52 VVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFT---ENCGRKRVKSSMD----VELAV 104
VG ++ L G++V + + E G + V+ +D + +
Sbjct: 292 NVGCSMHPDKQKPHFIEELEDLGYRVDLRSRRPQNMAMEGHGSRYVEDMVDETLQIRIGE 351
Query: 105 DAFEQSEGLEHLVIFSG--------DGCFTTLVAALQRKVKKVTIVS 143
+ + LV+ +G DG AL + V +VS
Sbjct: 352 SVMQYFDKPGTLVLATGDARPAKYSDGFLAYAQRAL-KMGWNVEVVS 397
>gi|189500992|ref|YP_001960462.1| hypothetical protein Cphamn1_2071 [Chlorobium phaeobacteroides BS1]
gi|189496433|gb|ACE04981.1| conserved hypothetical protein [Chlorobium phaeobacteroides BS1]
Length = 247
Score = 38.6 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 38/99 (38%), Gaps = 7/99 (7%)
Query: 76 QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQ 133
+V+ + + + + G R K++ D + +DA + + + I S D FT L + ++
Sbjct: 55 EVLLEHSIQPIQQFGYTRGKNATDSAMIIDAMDLLYTGNFDGFCIVSSDSDFTKLASRIR 114
Query: 134 RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
V + + S D F+ L+
Sbjct: 115 ESGLFVYGFGEKKTPSAFVS-----ACDKFIYTEVLRAR 148
>gi|121609559|ref|YP_997366.1| hypothetical protein Veis_2603 [Verminephrobacter eiseniae EF01-2]
gi|121554199|gb|ABM58348.1| hypothetical protein Veis_2603 [Verminephrobacter eiseniae EF01-2]
Length = 277
Score = 38.6 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 17/109 (15%), Positives = 42/109 (38%), Gaps = 16/109 (14%)
Query: 39 SRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSM 98
+R ++R Y+Y V+ + F+P L + F+ ++R +S+
Sbjct: 55 TRKELLRVYWYDGVMAN---GFTPQQRSLANIDDVQFRAGT------INGRDQQRDIASL 105
Query: 99 DVELAVDAFEQSEG---LEHLVIFSGDGCFTTLVAALQRKVKKVTIVST 144
+A D E + + V+ +GD + ++ ++ ++
Sbjct: 106 ---IATDLLELAGHHAICD-AVLVTGDSDLAVGIDMAKKHGVRIAVLGV 150
>gi|258616422|ref|ZP_05714192.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
[Enterococcus faecium DO]
Length = 284
Score = 38.2 bits (88), Expect = 0.44, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 49/146 (33%), Gaps = 28/146 (19%)
Query: 31 RKLLKA-FRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC 89
+LL+ F ++ A Y T V + D + G+ V K + +
Sbjct: 16 DRLLEKSFLETNNIVIAPYATIVSPTD---------IQDAIDGIGYPCVLKTTRGGYDGK 66
Query: 90 GRKRVKSSMDVELAVDAFEQSEGLEHLVI-----FS------GDGCFT--TLVAALQRKV 136
G+ +KS D+ A+D + + I S G G FT +V +
Sbjct: 67 GQYVLKSRADLAPAMDLLREGTCVLEAWIPFEKEISIMVAGNGQGDFTTFPVVENIHHNN 126
Query: 137 KKVTIVSTVLSDPSMASDQLRRQADY 162
++ P+ + +A+
Sbjct: 127 ILHETIA-----PAAIDQDVIEEAER 147
>gi|254432426|ref|ZP_05046129.1| protein containing DUF88 [Cyanobium sp. PCC 7001]
gi|197626879|gb|EDY39438.1| protein containing DUF88 [Cyanobium sp. PCC 7001]
Length = 244
Score = 38.2 bits (88), Expect = 0.45, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 33/94 (35%), Gaps = 11/94 (11%)
Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKV 136
+ ++F+ G+ D L +DA + +E + S D FT L ++ +
Sbjct: 61 IQPVQQFSYTSGKNAT----DSALIIDAMDLLHGGRVEGFCLVSSDSDFTRLATRIREEG 116
Query: 137 KKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
V + + + D F+ LK
Sbjct: 117 LLVIGFGERKTPKAFVA-----ACDRFLYTDILK 145
>gi|227500425|ref|ZP_03930487.1| conserved hypothetical protein [Anaerococcus tetradius ATCC 35098]
gi|227217488|gb|EEI82807.1| conserved hypothetical protein [Anaerococcus tetradius ATCC 35098]
Length = 224
Score = 38.2 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 7/47 (14%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query: 92 KRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKV 136
+ +D+++ +D + + ++ +V+ +GD F +R+
Sbjct: 143 TSKQKGVDMKIGIDIASLAYKKQVDKIVLIAGDSDFVPAAKLARREG 189
>gi|145219215|ref|YP_001129924.1| hypothetical protein Cvib_0400 [Prosthecochloris vibrioformis DSM
265]
gi|145205379|gb|ABP36422.1| conserved hypothetical protein [Chlorobium phaeovibrioides DSM 265]
Length = 247
Score = 38.2 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 19/100 (19%), Positives = 37/100 (37%), Gaps = 7/100 (7%)
Query: 76 QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQ 133
+V+ + + + + G R K++ D + +DA + + I S D FT L ++
Sbjct: 55 EVLLEFSIQPIQQFGYTRGKNATDSAMIIDAMDLLYTGRFNGFCIVSSDSDFTKLAVRIR 114
Query: 134 RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
V + S D F+ L+ +I
Sbjct: 115 ESGLIVYGFGEKKTPAPFVS-----ACDKFIYTEVLREKI 149
>gi|298529874|ref|ZP_07017276.1| conserved hypothetical protein [Desulfonatronospira thiodismutans
ASO3-1]
gi|298509248|gb|EFI33152.1| conserved hypothetical protein [Desulfonatronospira thiodismutans
ASO3-1]
Length = 213
Score = 38.2 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 11/67 (16%), Positives = 29/67 (43%), Gaps = 7/67 (10%)
Query: 100 VELAVDAFEQSEGL--EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLR 157
V++A+D + + V+ + + ++++ +V + + + S +L
Sbjct: 143 VKMALDMITLAARKAGDMFVLITDRTDLVPAMEMVRQEGVQVCL----DNMHAPVSIELS 198
Query: 158 RQADYFM 164
QAD F+
Sbjct: 199 EQAD-FI 204
>gi|257884793|ref|ZP_05664446.1| phosphoribosylaminoimidazole carboxylase [Enterococcus faecium
1,231,501]
gi|257820631|gb|EEV47779.1| phosphoribosylaminoimidazole carboxylase [Enterococcus faecium
1,231,501]
Length = 374
Score = 38.2 bits (88), Expect = 0.50, Method: Composition-based stats.
Identities = 25/146 (17%), Positives = 49/146 (33%), Gaps = 28/146 (19%)
Query: 31 RKLLKA-FRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC 89
+LL+ F ++ A Y T V + D + G+ V K + +
Sbjct: 106 DRLLEKSFLETNNIVIAPYATIVSPTD---------IQDAIDGIGYPCVLKTTRGGYDGK 156
Query: 90 GRKRVKSSMDVELAVDAFEQSEGLEHLVI-----------FSGDGCFT--TLVAALQRKV 136
G+ +KS D+ A+D + + I +G G FT +V +
Sbjct: 157 GQYVLKSRADLAPAMDLLREGTCVLEAWIPFEKEISIMVAGNGQGDFTTFPVVENIHHNN 216
Query: 137 KKVTIVSTVLSDPSMASDQLRRQADY 162
++ P+ + +A+
Sbjct: 217 ILHETIA-----PAAIDQDVIEEAER 237
>gi|298528840|ref|ZP_07016243.1| conserved hypothetical protein [Desulfonatronospira thiodismutans
ASO3-1]
gi|298510276|gb|EFI34179.1| conserved hypothetical protein [Desulfonatronospira thiodismutans
ASO3-1]
Length = 213
Score = 38.2 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 11/67 (16%), Positives = 29/67 (43%), Gaps = 7/67 (10%)
Query: 100 VELAVDAFEQSEGL--EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLR 157
V++A+D + + V+ + + ++++ +V + + + S +L
Sbjct: 143 VKMALDMITLAARKAGDMFVLITDRTDLVPAMEMVRQEGVQVCL----DNMHAPVSIELS 198
Query: 158 RQADYFM 164
QAD F+
Sbjct: 199 EQAD-FI 204
>gi|85708688|ref|ZP_01039754.1| hypothetical protein NAP1_05595 [Erythrobacter sp. NAP1]
gi|85690222|gb|EAQ30225.1| hypothetical protein NAP1_05595 [Erythrobacter sp. NAP1]
Length = 240
Score = 38.2 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 14/96 (14%), Positives = 36/96 (37%), Gaps = 7/96 (7%)
Query: 76 QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQ 133
++ + + + K++ D+ + +DA + ++ I + D FT LV L+
Sbjct: 55 KITNRFGIRPQQQFDVSKGKNATDMAMTIDAIDLLYQGKVDGFGIMTSDSDFTPLVTRLR 114
Query: 134 RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
+ + + + + F+D+ L
Sbjct: 115 QDG--IIVYGFGEAK---TPQAFKSVCTRFIDIKQL 145
>gi|242310286|ref|ZP_04809441.1| helicase [Helicobacter pullorum MIT 98-5489]
gi|239522684|gb|EEQ62550.1| helicase [Helicobacter pullorum MIT 98-5489]
Length = 242
Score = 38.2 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 16/114 (14%), Positives = 39/114 (34%), Gaps = 10/114 (8%)
Query: 31 RKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCG 90
+LLK R + Y V + S ++ + E +
Sbjct: 103 SELLKHLRRQP-------YFAVRLGEIDENSFQWKFKNYDKFKKILRKEIDVSELSNEDF 155
Query: 91 RKRVK-SSMDVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTI 141
+K +D+++ +D + +E +++ + D F V +++ V +
Sbjct: 156 VLDIKQKGVDMKIGLDIATLANKHQVEKIILITADSDFVPAVKHARKEGLIVQL 209
>gi|83768358|dbj|BAE58497.1| unnamed protein product [Aspergillus oryzae]
Length = 209
Score = 38.2 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 15/93 (16%), Positives = 30/93 (32%), Gaps = 7/93 (7%)
Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKV 136
K + + + K++ D + +DA + S + + S D FT L A ++
Sbjct: 9 LKQSIQPIQQFAYTHGKNATDSAMIIDAMDLLYSSRYDGFCLVSSDSDFTRLAARIRESG 68
Query: 137 KKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
V + + F+ L
Sbjct: 69 LIVYGFGENHTPKPFVA-----ACSKFIYTENL 96
>gi|315930785|gb|EFV09786.1| Putative uncharacterized protein [Campylobacter jejuni subsp.
jejuni 305]
Length = 226
Score = 38.2 bits (88), Expect = 0.54, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Query: 82 AKEFTENCGRKRVK-SSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKV 136
K+ ++N K +D+++ +D + + ++ +V+ SGD F + +
Sbjct: 137 IKDLSDNDYMYYAKQKGVDMKIGIDIATLALKKLVQKIVLISGDSDFVPASKLARTEG 194
>gi|294621300|ref|ZP_06700481.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
[Enterococcus faecium U0317]
gi|314938735|ref|ZP_07846010.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
[Enterococcus faecium TX0133a04]
gi|314941163|ref|ZP_07848060.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
[Enterococcus faecium TX0133C]
gi|314947886|ref|ZP_07851291.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
[Enterococcus faecium TX0082]
gi|314953060|ref|ZP_07856019.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
[Enterococcus faecium TX0133A]
gi|314993311|ref|ZP_07858682.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
[Enterococcus faecium TX0133B]
gi|314997626|ref|ZP_07862557.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
[Enterococcus faecium TX0133a01]
gi|291599138|gb|EFF30174.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
[Enterococcus faecium U0317]
gi|313588343|gb|EFR67188.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
[Enterococcus faecium TX0133a01]
gi|313592213|gb|EFR71058.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
[Enterococcus faecium TX0133B]
gi|313594862|gb|EFR73707.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
[Enterococcus faecium TX0133A]
gi|313600023|gb|EFR78866.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
[Enterococcus faecium TX0133C]
gi|313641948|gb|EFS06528.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
[Enterococcus faecium TX0133a04]
gi|313645655|gb|EFS10235.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
[Enterococcus faecium TX0082]
Length = 377
Score = 38.2 bits (88), Expect = 0.54, Method: Composition-based stats.
Identities = 25/146 (17%), Positives = 49/146 (33%), Gaps = 28/146 (19%)
Query: 31 RKLLKA-FRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC 89
+LL+ F ++ A Y T V + D + G+ V K + +
Sbjct: 109 DRLLEKSFLETNNIVIAPYATIVSPTD---------IQDAIDGIGYPCVLKTTRGGYDGK 159
Query: 90 GRKRVKSSMDVELAVDAFEQSEGLEHLVI-----------FSGDGCFT--TLVAALQRKV 136
G+ +KS D+ A+D + + I +G G FT +V +
Sbjct: 160 GQYVLKSRADLAPAMDLLREGTCVLEAWIPFEKEISIMVAGNGQGDFTTFPVVENIHHNN 219
Query: 137 KKVTIVSTVLSDPSMASDQLRRQADY 162
++ P+ + +A+
Sbjct: 220 ILHETIA-----PAAIDQDVIEEAER 240
>gi|261207668|ref|ZP_05922353.1| phosphoribosylaminoimidazole carboxylase [Enterococcus faecium TC
6]
gi|289565786|ref|ZP_06446229.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
[Enterococcus faecium D344SRF]
gi|294615905|ref|ZP_06695747.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
[Enterococcus faecium E1636]
gi|260078051|gb|EEW65757.1| phosphoribosylaminoimidazole carboxylase [Enterococcus faecium TC
6]
gi|289162424|gb|EFD10281.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
[Enterococcus faecium D344SRF]
gi|291591291|gb|EFF22958.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
[Enterococcus faecium E1636]
Length = 374
Score = 38.2 bits (88), Expect = 0.54, Method: Composition-based stats.
Identities = 25/146 (17%), Positives = 49/146 (33%), Gaps = 28/146 (19%)
Query: 31 RKLLKA-FRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC 89
+LL+ F ++ A Y T V + D + G+ V K + +
Sbjct: 106 DRLLEKSFLETNNIVIAPYATIVSPTD---------IQDAIDGIGYPCVLKTTRGGYDGK 156
Query: 90 GRKRVKSSMDVELAVDAFEQSEGLEHLVI-----------FSGDGCFT--TLVAALQRKV 136
G+ +KS D+ A+D + + I +G G FT +V +
Sbjct: 157 GQYVLKSRADLAPAMDLLREGTCVLEAWIPFEKEISIMVAGNGQGDFTTFPVVENIHHNN 216
Query: 137 KKVTIVSTVLSDPSMASDQLRRQADY 162
++ P+ + +A+
Sbjct: 217 ILHETIA-----PAAIDQDVIEEAER 237
>gi|69246325|ref|ZP_00603898.1| Phosphoribosylaminoimidazole carboxylase, ATPase subunit
[Enterococcus faecium DO]
gi|257878084|ref|ZP_05657737.1| phosphoribosylaminoimidazole carboxylase [Enterococcus faecium
1,230,933]
gi|257889717|ref|ZP_05669370.1| phosphoribosylaminoimidazole carboxylase [Enterococcus faecium
1,231,410]
gi|257892344|ref|ZP_05671997.1| phosphoribosylaminoimidazole carboxylase [Enterococcus faecium
1,231,408]
gi|260559134|ref|ZP_05831320.1| phosphoribosylaminoimidazole carboxylase [Enterococcus faecium C68]
gi|293563736|ref|ZP_06678176.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
[Enterococcus faecium E1162]
gi|293569365|ref|ZP_06680662.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
[Enterococcus faecium E1071]
gi|68195339|gb|EAN09789.1| Phosphoribosylaminoimidazole carboxylase, ATPase subunit
[Enterococcus faecium DO]
gi|257812312|gb|EEV41070.1| phosphoribosylaminoimidazole carboxylase [Enterococcus faecium
1,230,933]
gi|257826077|gb|EEV52703.1| phosphoribosylaminoimidazole carboxylase [Enterococcus faecium
1,231,410]
gi|257828723|gb|EEV55330.1| phosphoribosylaminoimidazole carboxylase [Enterococcus faecium
1,231,408]
gi|260074891|gb|EEW63207.1| phosphoribosylaminoimidazole carboxylase [Enterococcus faecium C68]
gi|291587891|gb|EFF19742.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
[Enterococcus faecium E1071]
gi|291604314|gb|EFF33808.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
[Enterococcus faecium E1162]
Length = 374
Score = 38.2 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 25/146 (17%), Positives = 49/146 (33%), Gaps = 28/146 (19%)
Query: 31 RKLLKA-FRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC 89
+LL+ F ++ A Y T V + D + G+ V K + +
Sbjct: 106 DRLLEKSFLETNNIVIAPYATIVSPTD---------IQDAIDGIGYPCVLKTTRGGYDGK 156
Query: 90 GRKRVKSSMDVELAVDAFEQSEGLEHLVI-----------FSGDGCFT--TLVAALQRKV 136
G+ +KS D+ A+D + + I +G G FT +V +
Sbjct: 157 GQYVLKSRADLAPAMDLLREGTCVLEAWIPFEKEISIMVAGNGQGDFTTFPVVENIHHNN 216
Query: 137 KKVTIVSTVLSDPSMASDQLRRQADY 162
++ P+ + +A+
Sbjct: 217 ILHETIA-----PAAIDQDVIEEAER 237
>gi|310798844|gb|EFQ33737.1| ATPase [Glomerella graminicola M1.001]
Length = 1320
Score = 38.2 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 37/99 (37%), Gaps = 21/99 (21%)
Query: 29 DYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD-----WLHYNGFQVVAKVAK 83
DY + K F R + A Y + D E S ++ L L + GF V++ K
Sbjct: 659 DYEETYKYFTRRGSRVLALAYKQLTVDNELGGSKINELKRENVESGLTFAGFLVLSCPLK 718
Query: 84 EFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
E D + AV +S +V+ +GD
Sbjct: 719 E--------------DAKQAVQMLNESSH--RVVMITGD 741
>gi|268611850|ref|ZP_06145577.1| hypothetical protein RflaF_20381 [Ruminococcus flavefaciens FD-1]
Length = 303
Score = 38.2 bits (88), Expect = 0.57, Method: Composition-based stats.
Identities = 29/169 (17%), Positives = 53/169 (31%), Gaps = 31/169 (18%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRK-LLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
+ A+ ID N+ ++K Y K +L + +V Y P
Sbjct: 6 RYAVLIDADNV--AAK-------YTKYILDEVSNYGVVTYKRVY----------GDWTRP 46
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDG 123
L ++++ G+ D + +DA + S ++ I S D
Sbjct: 47 NLAGWKNMALDNAITPIQQYSYTTGKNAT----DSAMIIDAMDILYSHNVDGFCIVSSDS 102
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
FT L L+ V + + ++ + F L L E
Sbjct: 103 DFTRLAIRLRESGIHVIGMGERKTPKPFST-----ACNAFKYLEILAEE 146
>gi|257881130|ref|ZP_05660783.1| phosphoribosylaminoimidazole carboxylase [Enterococcus faecium
1,231,502]
gi|257816788|gb|EEV44116.1| phosphoribosylaminoimidazole carboxylase [Enterococcus faecium
1,231,502]
Length = 370
Score = 37.8 bits (87), Expect = 0.58, Method: Composition-based stats.
Identities = 25/146 (17%), Positives = 49/146 (33%), Gaps = 28/146 (19%)
Query: 31 RKLLKA-FRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC 89
+LL+ F ++ A Y T V + D + G+ V K + +
Sbjct: 102 DRLLEKSFLETNNIVIAPYATIVSPTD---------IQDAIDGIGYPCVLKTTRGGYDGK 152
Query: 90 GRKRVKSSMDVELAVDAFEQSEGLEHLVI-----------FSGDGCFT--TLVAALQRKV 136
G+ +KS D+ A+D + + I +G G FT +V +
Sbjct: 153 GQYVLKSRADLAPAMDLLREGTCVLEAWIPFEKEISIMVAGNGQGDFTTFPVVENIHHNN 212
Query: 137 KKVTIVSTVLSDPSMASDQLRRQADY 162
++ P+ + +A+
Sbjct: 213 ILHETIA-----PAAIDQDVIEEAER 233
>gi|190015967|ref|YP_001965175.1| hypothetical protein PNSL1.072 [Rhodococcus sp. NS1]
gi|114796807|gb|ABI79400.1| hypothetical protein PNSL1.072 [Rhodococcus sp. NS1]
Length = 224
Score = 37.8 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 29/149 (19%), Positives = 65/149 (43%), Gaps = 14/149 (9%)
Query: 5 REKIALFIDGANLYASSK-ALGFDI-----DY----RKLLKAFRSRAIVIRAYYYTTVVG 54
R+++ +F+D + S++ A G+ + D R++L A R R+ + + +
Sbjct: 37 RDRVDVFLDMGYVIRSARTAFGWRVGSRTPDPLATAREIL-ALRYRSSELGTVHVFDGLH 95
Query: 55 DPEQQFSPLHPLLDW---LHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE 111
DP+++ H +LDW + +G +V ++ + G ++ + + A+D +S
Sbjct: 96 DPDRRPLDHHRMLDWKHQVEASGEVIVHLRPLQYLPDGGFRQKEVDTSLAFAMDDAARSG 155
Query: 112 GLEHLVIFSGDGCFTTLVAALQRKVKKVT 140
E +V F+GD + +
Sbjct: 156 RTEAIVAFTGDRDLLPAARRVIAADVRFE 184
>gi|78186223|ref|YP_374266.1| hypothetical protein Plut_0335 [Chlorobium luteolum DSM 273]
gi|78166125|gb|ABB23223.1| conserved hypothetical protein [Chlorobium luteolum DSM 273]
Length = 247
Score = 37.8 bits (87), Expect = 0.59, Method: Composition-based stats.
Identities = 19/109 (17%), Positives = 40/109 (36%), Gaps = 8/109 (7%)
Query: 76 QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQ 133
+V+ + + + + G + K+S D + +DA + + I S D FT L ++
Sbjct: 55 EVLLEYSIQPIQQFGYTKGKNSTDSAMIIDAMDLLYTGRFNGFCIVSSDSDFTKLAVRIR 114
Query: 134 RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI-ARDPDEDK 181
V + S D F+ L+ + +P + +
Sbjct: 115 EAGLTVYGFGEQKTPGPFVS-----ACDKFIYTEVLRAKTNENEPIKRR 158
>gi|258649161|ref|ZP_05736630.1| conserved hypothetical protein [Prevotella tannerae ATCC 51259]
gi|260850826|gb|EEX70695.1| conserved hypothetical protein [Prevotella tannerae ATCC 51259]
Length = 239
Score = 37.8 bits (87), Expect = 0.60, Method: Composition-based stats.
Identities = 29/163 (17%), Positives = 53/163 (32%), Gaps = 39/163 (23%)
Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYT-----TVVGDPEQQFSP 62
IA+ IDG N+ ++ LG DI + S I Y + E +
Sbjct: 14 IAILIDGDNV--AADKLG-DI-----ISFVSSYGNPIIRRIYADWTKPAMKRWKEDAKTF 65
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFS 120
L++ L Y G + D+ L +DA + ++ I S
Sbjct: 66 SFRLVEALSYVGVKNTT-------------------DMALVIDAMDLLHGKNVQGFCIVS 106
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163
D +T L ++ + ++ + + L+ F
Sbjct: 107 SDSDYTLLAQRIREEG----LLVLGYGEQKTPA-SLQNSCHEF 144
>gi|194476703|ref|YP_002048882.1| hypothetical protein PCC_0222 [Paulinella chromatophora]
gi|171191710|gb|ACB42672.1| hypothetical protein PCC_0222 [Paulinella chromatophora]
Length = 246
Score = 37.8 bits (87), Expect = 0.60, Method: Composition-based stats.
Identities = 15/69 (21%), Positives = 29/69 (42%), Gaps = 6/69 (8%)
Query: 18 YASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNG--- 74
Y +++ I YR LL+ + +VIRA+ Y + Q + H +G
Sbjct: 29 YLAARP---QISYRFLLEELAAAGLVIRAWSYVPSLDHQGQAIAAWHSFQHEAKRSGPLN 85
Query: 75 FQVVAKVAK 83
+Q+ + +
Sbjct: 86 YQISRRPIR 94
>gi|260578532|ref|ZP_05846443.1| conserved hypothetical protein [Corynebacterium jeikeium ATCC
43734]
gi|258603316|gb|EEW16582.1| conserved hypothetical protein [Corynebacterium jeikeium ATCC
43734]
Length = 130
Score = 37.8 bits (87), Expect = 0.61, Method: Composition-based stats.
Identities = 15/86 (17%), Positives = 32/86 (37%), Gaps = 12/86 (13%)
Query: 94 VKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151
++ +D+ + +D +E + +++ SGD F +R I + +
Sbjct: 30 IQKGVDMRIGLDIATMAERGIVTQIIMISGDSDFVPAAKHARRAG----IDFIIDPLWAR 85
Query: 152 ASDQLRRQADYFMDLAYLKNEIARDP 177
SD L D ++ + R P
Sbjct: 86 ISDSLNEHVD------GVRECVRRPP 105
>gi|312115431|ref|YP_004013027.1| hypothetical protein Rvan_2717 [Rhodomicrobium vannielii ATCC
17100]
gi|311220560|gb|ADP71928.1| hypothetical protein Rvan_2717 [Rhodomicrobium vannielii ATCC
17100]
Length = 626
Score = 37.8 bits (87), Expect = 0.61, Method: Composition-based stats.
Identities = 11/53 (20%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Query: 94 VKSSMDVELAVDA---FEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS 143
K+ D+++A D E ++ SGD FT ++ L+ ++ + +
Sbjct: 114 FKNGTDIKIACDIRDFLEHPTRFGEFIVLSGDADFTPVLHHLRSHDRRTVVYA 166
>gi|119775572|ref|YP_928312.1| inorganic polyphosphate/ATP-NAD kinase [Shewanella amazonensis
SB2B]
gi|119768072|gb|ABM00643.1| NAD(+) kinase [Shewanella amazonensis SB2B]
Length = 292
Score = 37.8 bits (87), Expect = 0.61, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 26/77 (33%), Gaps = 10/77 (12%)
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
L L WL G++V+ + G K VE AVD + ++ GD
Sbjct: 23 LKRLHHWLGSQGYEVLVEERV-----AGELGAK----VE-AVDLLAIGNRCDLAIVVGGD 72
Query: 123 GCFTTLVAALQRKVKKV 139
G L R V
Sbjct: 73 GNMLGAARVLARFDVGV 89
>gi|4335722|gb|AAD17400.1| unknown protein [Arabidopsis thaliana]
Length = 524
Score = 37.8 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 31/94 (32%), Gaps = 20/94 (21%)
Query: 62 PLHPLLDWLHYNGFQVVAKV--------AKEFTENCGRKRVKSSMDVELAVDAFEQSEGL 113
P+ + +NGF + + K+ + +D F L
Sbjct: 51 PVVNFSAYGDFNGFPRRVREGCQRTGVKLIDVPNGRKDASDKA-----ILIDMFLFV--L 103
Query: 114 E-----HLVIFSGDGCFTTLVAALQRKVKKVTIV 142
+ +V+ SGD F + L ++ V +V
Sbjct: 104 DNKPPATIVLVSGDVDFAPALHILGQRGYTVILV 137
>gi|186683222|ref|YP_001866418.1| hypothetical protein Npun_F2944 [Nostoc punctiforme PCC 73102]
gi|186465674|gb|ACC81475.1| conserved hypothetical protein [Nostoc punctiforme PCC 73102]
Length = 186
Score = 37.8 bits (87), Expect = 0.63, Method: Composition-based stats.
Identities = 28/192 (14%), Positives = 65/192 (33%), Gaps = 52/192 (27%)
Query: 7 KIALFIDGANLYASSKALG------------------------FDIDYRKLLKAF--RSR 40
KI ++D +NL+ + L + +DY +L + +
Sbjct: 2 KIFTYVDNSNLFIEGRRLSAVNKRIDGVGNIYEAINLKIFDNDWYMDYGRLHEFLCGTEK 61
Query: 41 AIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDV 100
+ + + + D++ GF V + + G+++ +D
Sbjct: 62 SEIGGTRLWGSPPPKDT--------FWDYVKSKGFNVQT-----YERSKGKEKK---VDT 105
Query: 101 ELAVDAFEQSEGL-----EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQ 155
+A + S + + +VI +GD + + L KV + A+ +
Sbjct: 106 AIAYQIGKDSGKIIDKENDIIVIAAGDKDYMPCIDDLTSDGFKVHVA-----FWGHAARE 160
Query: 156 LRRQADYFMDLA 167
++ A F++L
Sbjct: 161 VQEAATKFINLD 172
>gi|120599630|ref|YP_964204.1| inorganic polyphosphate/ATP-NAD kinase [Shewanella sp. W3-18-1]
gi|146292376|ref|YP_001182800.1| inorganic polyphosphate/ATP-NAD kinase [Shewanella putrefaciens
CN-32]
gi|189037392|sp|A4Y4W8|PPNK_SHEPC RecName: Full=Probable inorganic polyphosphate/ATP-NAD kinase;
Short=Poly(P)/ATP NAD kinase
gi|189037394|sp|A1RLV5|PPNK_SHESW RecName: Full=Probable inorganic polyphosphate/ATP-NAD kinase;
Short=Poly(P)/ATP NAD kinase
gi|120559723|gb|ABM25650.1| NAD(+) kinase [Shewanella sp. W3-18-1]
gi|145564066|gb|ABP75001.1| NAD(+) kinase [Shewanella putrefaciens CN-32]
gi|319425676|gb|ADV53750.1| ATP-NAD/AcoX kinase [Shewanella putrefaciens 200]
Length = 309
Score = 37.8 bits (87), Expect = 0.63, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 37/107 (34%), Gaps = 16/107 (14%)
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L L WL G++V+A+ R + ++E AVD E + ++
Sbjct: 38 QTLKRLHHWLTMQGYEVLAEE---------RVSTELGTNIE-AVDLLEIGARCDLAIVVG 87
Query: 121 GDGCFTTLVAALQRK-----VKKVTIVSTVLSDPSMASDQ-LRRQAD 161
GDG L R + + P A ++ L R D
Sbjct: 88 GDGNMLGAARVLARFDLGVIGVNRGNLGFLTDLPPDAFEEALARVLD 134
>gi|308050612|ref|YP_003914178.1| NAD(+) kinase [Ferrimonas balearica DSM 9799]
gi|307632802|gb|ADN77104.1| NAD(+) kinase [Ferrimonas balearica DSM 9799]
Length = 309
Score = 37.8 bits (87), Expect = 0.64, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 29/91 (31%), Gaps = 13/91 (14%)
Query: 51 TVVGDPEQQFSPLHPLLDWLHYNGFQVVA--KVAKEFTENCGRKRVKSSMDVELAVDAFE 108
D + L L WL G++V+ +VAK + + VD
Sbjct: 26 IGKPDHDGANQTLTRLFYWLRKQGYEVLLEQRVAKHLGCDKAER-----------VDLTT 74
Query: 109 QSEGLEHLVIFSGDGCFTTLVAALQRKVKKV 139
+ + ++ GDG L R V
Sbjct: 75 LGQRCDLAIVVGGDGNMLGAARVLSRFDVAV 105
>gi|113971068|ref|YP_734861.1| inorganic polyphosphate/ATP-NAD kinase [Shewanella sp. MR-4]
gi|123324829|sp|Q0HGL3|PPNK_SHESM RecName: Full=Probable inorganic polyphosphate/ATP-NAD kinase;
Short=Poly(P)/ATP NAD kinase
gi|113885752|gb|ABI39804.1| NAD(+) kinase [Shewanella sp. MR-4]
Length = 309
Score = 37.8 bits (87), Expect = 0.64, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 25/79 (31%), Gaps = 10/79 (12%)
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L L WL G++V+ + G V AVD E + ++
Sbjct: 38 QTLKRLHHWLTVQGYEVLVEE--RVASELGTHIV--------AVDLLEIGARCDLAIVVG 87
Query: 121 GDGCFTTLVAALQRKVKKV 139
GDG L R V
Sbjct: 88 GDGNMLGAARVLARFDVGV 106
>gi|255318128|ref|ZP_05359372.1| FAD/FMN-binding/pyridine nucleotide-disulphide oxidoreductase
family protein [Acinetobacter radioresistens SK82]
gi|255304839|gb|EET84012.1| FAD/FMN-binding/pyridine nucleotide-disulphide oxidoreductase
family protein [Acinetobacter radioresistens SK82]
Length = 687
Score = 37.8 bits (87), Expect = 0.65, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 36/93 (38%), Gaps = 8/93 (8%)
Query: 69 WLHYNGFQVVAKVAKEFTENCGRKRVKSSMD--VELAVDAFEQSEGLEHLVIFSGDGCFT 126
W+H G + K G K D + + VD ++++VI +G +T
Sbjct: 593 WIHRTGLK-----HKHVQMMSGVNYEKID-DQGLHITVDGKPMLLEVDNVVICAGQESYT 646
Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQ 159
+ LQ K+V ++ + + + RQ
Sbjct: 647 AMFEQLQADGKRVHLIGGAREAGELDAKRAIRQ 679
>gi|332673942|gb|AEE70759.1| conserved hypothetical protein [Helicobacter pylori 83]
Length = 266
Score = 37.8 bits (87), Expect = 0.65, Method: Composition-based stats.
Identities = 11/47 (23%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
+++FS D F ++ A K +V ++ + P++ LR+ D
Sbjct: 178 CILLFSKDTDFVPVLEATWEKGFQV-FIANIQEGPNLVPPDLRKSCD 223
>gi|262379821|ref|ZP_06072977.1| FAD/FMN-binding/pyridine nucleotide-disulphide oxidoreductase
[Acinetobacter radioresistens SH164]
gi|262299278|gb|EEY87191.1| FAD/FMN-binding/pyridine nucleotide-disulphide oxidoreductase
[Acinetobacter radioresistens SH164]
Length = 674
Score = 37.8 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 36/93 (38%), Gaps = 8/93 (8%)
Query: 69 WLHYNGFQVVAKVAKEFTENCGRKRVKSSMD--VELAVDAFEQSEGLEHLVIFSGDGCFT 126
W+H G + K G K D + + VD ++++VI +G +T
Sbjct: 580 WIHRTGLK-----HKHVQMMSGVNYEKID-DQGLHITVDGKPMLLEVDNVVICAGQESYT 633
Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQ 159
+ LQ K+V ++ + + + RQ
Sbjct: 634 AMFEQLQADGKRVHLIGGAREAGELDAKRAIRQ 666
>gi|305666922|ref|YP_003863209.1| NADH:flavin oxidoreductase [Maribacter sp. HTCC2170]
gi|88709150|gb|EAR01384.1| NADH:flavin oxidoreductase, Old Yellow Enzyme family protein
[Maribacter sp. HTCC2170]
Length = 675
Score = 37.8 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 10/50 (20%), Positives = 23/50 (46%)
Query: 113 LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162
+++++I +G F L+ L+ K KV ++ + + + QA
Sbjct: 621 VDNVIICAGQLPFKELLEPLKAKGIKVHVIGGADVAAELDAKRAINQASR 670
>gi|261838472|gb|ACX98238.1| hypothetical protein KHP_1042 [Helicobacter pylori 51]
Length = 215
Score = 37.8 bits (87), Expect = 0.68, Method: Composition-based stats.
Identities = 11/47 (23%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
+++FS D F ++ A K V ++ + P++ LR+ D
Sbjct: 126 CILLFSKDTDFVPVLEAAWEKGFGV-FIANIQEGPNLVPPDLRKSCD 171
>gi|52842281|ref|YP_096080.1| hypothetical protein lpg2067 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52629392|gb|AAU28133.1| hypothetical protein lpg2067 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 260
Score = 37.8 bits (87), Expect = 0.69, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 53/168 (31%), Gaps = 29/168 (17%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
K+A+ ID N ++A+ D LL I Y Q+ +
Sbjct: 12 KLAVLIDADN----ARAVIID----GLLTEIAGYGDAIVRRIYGDFTLPSSAQWKKVLH- 62
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124
+ K ++F G+ D L +DA + + I S D
Sbjct: 63 ---------KYAIKPVQQFAFTSGKNAT----DSALIIDAMDLLYTHRFGGFCIVSSDSD 109
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
FT+L ++ + +V + + R + F+ L+
Sbjct: 110 FTSLANRIREEGLQV----FGFGEKK-TPEAFRNACNKFIFTEVLRPV 152
>gi|21360746|gb|AAM49687.1| phoshoribosylaminoimiazolcarboxylase ATPase subunit [Enterococcus
faecium]
Length = 164
Score = 37.4 bits (86), Expect = 0.75, Method: Composition-based stats.
Identities = 25/146 (17%), Positives = 50/146 (34%), Gaps = 28/146 (19%)
Query: 31 RKLLKA-FRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC 89
+LL+ F ++ A Y T V + D + G+ V K + +
Sbjct: 27 DRLLEKSFLETNNIVIAPYATIVSPTD---------IQDAIDGIGYPCVLKTTRGGYDGK 77
Query: 90 GRKRVKSSMDVELAVDAFEQSEGLEHLVI-----------FSGDGCFT--TLVAALQRKV 136
G+ +KS +D+ A+D + + I +G G FT +V +
Sbjct: 78 GQYVLKSRVDLAPAMDLLREGTCVLEAWIPFEKEISIMVAGNGQGDFTTFPVVENIHHNN 137
Query: 137 KKVTIVSTVLSDPSMASDQLRRQADY 162
++ P+ + +A+
Sbjct: 138 ILHETIA-----PAAIDQDVIEEAER 158
>gi|30679459|ref|NP_179158.2| unknown protein [Arabidopsis thaliana]
gi|34365745|gb|AAQ65184.1| At2g15560 [Arabidopsis thaliana]
gi|51968780|dbj|BAD43082.1| unknown protein [Arabidopsis thaliana]
gi|51970842|dbj|BAD44113.1| unknown protein [Arabidopsis thaliana]
gi|110738852|dbj|BAF01349.1| hypothetical protein [Arabidopsis thaliana]
gi|330251322|gb|AEC06416.1| Putative endonuclease or glycosyl hydrolase [Arabidopsis thaliana]
Length = 489
Score = 37.4 bits (86), Expect = 0.75, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 31/94 (32%), Gaps = 20/94 (21%)
Query: 62 PLHPLLDWLHYNGFQVVAKV--------AKEFTENCGRKRVKSSMDVELAVDAFEQSEGL 113
P+ + +NGF + + K+ + +D F L
Sbjct: 87 PVVNFSAYGDFNGFPRRVREGCQRTGVKLIDVPNGRKDASDKA-----ILIDMFLFV--L 139
Query: 114 E-----HLVIFSGDGCFTTLVAALQRKVKKVTIV 142
+ +V+ SGD F + L ++ V +V
Sbjct: 140 DNKPPATIVLVSGDVDFAPALHILGQRGYTVILV 173
>gi|150249496|gb|ABR67774.1| unknown [Saccharothrix mutabilis subsp. capreolus]
Length = 278
Score = 37.4 bits (86), Expect = 0.76, Method: Composition-based stats.
Identities = 31/151 (20%), Positives = 55/151 (36%), Gaps = 33/151 (21%)
Query: 4 PREKIALFIDG---ANL--YASS---KALGFDID--YRKLLKAFR-------SRAIVIRA 46
E+I +F DG A L Y +S +A +D + L +V A
Sbjct: 3 NGERIGVFYDGTWFAYLSDYFASVHPRAARVSLDGFHDALRWYVHTVTHQPLDECVVSEA 62
Query: 47 YYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA 106
+Y + P F V+A + + +DV LA++A
Sbjct: 63 HYVRGRIDTPAVAFDA--------------VLAAAGVVRHDLPLHAGKEKGVDVHLALEA 108
Query: 107 FEQSEGLEH--LVIFSGDGCFTTLVAALQRK 135
+E++ + +V+ +GD F L L+ +
Sbjct: 109 WERATSVPLRWVVLVTGDADFAPLATRLKTR 139
>gi|21360740|gb|AAM49684.1| phoshoribosylaminoimiazolcarboxylase ATPase subunit [Enterococcus
faecium]
Length = 164
Score = 37.4 bits (86), Expect = 0.76, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 50/146 (34%), Gaps = 28/146 (19%)
Query: 31 RKLLKA-FRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC 89
+LL+ F ++ A Y T V + D + G+ V K + +
Sbjct: 27 DRLLEKSFLETNNIVIAPYATIVSPTD---------IQDAIDGIGYPCVLKTTRGGYDGR 77
Query: 90 GRKRVKSSMDVELAVDAFEQSEGLEHLVI-----------FSGDGCFT--TLVAALQRKV 136
G+ +KS D+ A+D + + I +G G FT +V + R
Sbjct: 78 GQYVLKSRADLAPAMDLLREGTCVLEAWIPFEKEISIMVAGNGQGDFTTFPVVENIHRNN 137
Query: 137 KKVTIVSTVLSDPSMASDQLRRQADY 162
++ P+ + +A+
Sbjct: 138 ILHETIA-----PAAIDQDVIEEAER 158
>gi|15612138|ref|NP_223790.1| hypothetical protein jhp1073 [Helicobacter pylori J99]
gi|4155667|gb|AAD06653.1| putative [Helicobacter pylori J99]
Length = 285
Score = 37.4 bits (86), Expect = 0.76, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 51/129 (39%), Gaps = 23/129 (17%)
Query: 76 QVVAKVAKE---FTENCGRKRVKSSMDVELAV----------DAFEQSE--------GLE 114
QV +V + F + +RV ++ E+ + DA + L
Sbjct: 137 QVKLRVGRVRFMFKDMPKDQRVHGGLEAEILIPHLELRQKQIDALLAHDITKLYCTKPLG 196
Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD-YFMDLAYLKNEI 173
+V+FS D F ++ A K +V ++ + P+ L++ + ++A + + +
Sbjct: 197 CVVLFSKDTDFVPVLEAAWEKGFEV-FIANIQESPNSVPSDLKKSCNVRERNVAEIVDNL 255
Query: 174 ARDPDEDKK 182
++ KK
Sbjct: 256 PKNQYTPKK 264
>gi|71756201|ref|XP_829015.1| hypothetical protein [Trypanosoma brucei TREU927]
gi|70834401|gb|EAN79903.1| nucleic acid binding protein, putative [Trypanosoma brucei]
gi|261334955|emb|CBH17949.1| nucleic acid binding protein, putative [Trypanosoma brucei
gambiense DAL972]
Length = 516
Score = 37.4 bits (86), Expect = 0.77, Method: Composition-based stats.
Identities = 14/61 (22%), Positives = 25/61 (40%), Gaps = 3/61 (4%)
Query: 78 VAKVAKEFT-ENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDGCFTTLVAALQR 134
K K +T + G V++ +DV +A E + +V+ GD V+ Q
Sbjct: 394 RMKRQKGYTGDGPGYVWVQTGVDVAIATCVIETFLRRQFDQVVLLCGDSDVYPAVSFCQE 453
Query: 135 K 135
+
Sbjct: 454 Q 454
>gi|237751873|ref|ZP_04582353.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
BAA-430]
gi|229376706|gb|EEO26797.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
BAA-430]
Length = 242
Score = 37.4 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 17/114 (14%), Positives = 37/114 (32%), Gaps = 10/114 (8%)
Query: 31 RKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCG 90
+LL R + Y V + S D+ + E T
Sbjct: 103 SELLNHLRKQP-------YFAVRLGEIDENSFQWKFRDYDKFRKILRKEIDIGELTNEDF 155
Query: 91 RKRVK-SSMDVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTI 141
+K +D+++ +D + E +++ + D F V +++ V +
Sbjct: 156 VLDIKQKGVDMKIGLDIATLANKHQAEKIILITADSDFIPAVKHARKEGIIVQL 209
>gi|227547784|ref|ZP_03977833.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM
44291]
gi|227080150|gb|EEI18113.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM
44291]
Length = 238
Score = 37.4 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 41/135 (30%), Gaps = 25/135 (18%)
Query: 50 TTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ 109
T Q + P ++ L GF V AK + + +
Sbjct: 78 TVFTNIAAQGADVVRPWVEALRNVGFAVFAKPKSDDDSDVDQD-------------MLAH 124
Query: 110 SEGL-EHLVI-----FSGDG-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162
E + V+ S DG F + L + VT++ S++
Sbjct: 125 IERRRDEGVLRGLVVASADGQNFMPAIEDLLNEGIPVTVLGFHEHASWAVSNEEID---- 180
Query: 163 FMDLAYLKNEIARDP 177
F+DL + R+P
Sbjct: 181 FVDLEDIPGVF-REP 194
>gi|21360736|gb|AAM49682.1| phoshoribosylaminoimiazolcarboxylase ATPase subunit [Enterococcus
faecium]
Length = 164
Score = 37.4 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 50/146 (34%), Gaps = 28/146 (19%)
Query: 31 RKLLKA-FRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC 89
+LL+ F ++ A Y T V + D + G+ V K + +
Sbjct: 27 DRLLEKSFLETNNIVIAPYATIVSPTD---------IQDAIDGIGYPCVLKTTRGGYDGK 77
Query: 90 GRKRVKSSMDVELAVDAFEQSEGLEHLVI-----------FSGDGCFT--TLVAALQRKV 136
G+ +KS D+ A+D + + I +G G FT +V + R
Sbjct: 78 GQYVLKSRADLAPAMDLLREGTCVLEAWIPFEKEISIMVAGNGQGDFTTFPVVENIHRNN 137
Query: 137 KKVTIVSTVLSDPSMASDQLRRQADY 162
++ P+ + +A+
Sbjct: 138 ILHETIA-----PAAIDQDVIEEAER 158
>gi|229844492|ref|ZP_04464632.1| hypothetical protein CGSHi6P18H1_09260 [Haemophilus influenzae
6P18H1]
gi|229812741|gb|EEP48430.1| hypothetical protein CGSHi6P18H1_09260 [Haemophilus influenzae
6P18H1]
Length = 273
Score = 37.4 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 10/44 (22%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Query: 96 SSMDVELAVDA--FEQSEGLEHLVIFSGDGCFTTLVAALQRKVK 137
S+DV+L +D + ++ +V+ +GD F + K
Sbjct: 160 KSVDVKLGMDITILSYEKLVDVIVLIAGDSDFVPAAKQARIKGV 203
>gi|298528860|ref|ZP_07016263.1| conserved hypothetical protein [Desulfonatronospira thiodismutans
ASO3-1]
gi|298510296|gb|EFI34199.1| conserved hypothetical protein [Desulfonatronospira thiodismutans
ASO3-1]
Length = 213
Score = 37.4 bits (86), Expect = 0.80, Method: Composition-based stats.
Identities = 11/67 (16%), Positives = 29/67 (43%), Gaps = 7/67 (10%)
Query: 100 VELAVDAFEQSEGL--EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLR 157
V++A+D + + V+ + + ++++ +V + + + S +L
Sbjct: 143 VKMALDMVTLAARKAGDMFVLITDRTDLVPAMEMVRQEGVQVCL----DNMHAPVSIELS 198
Query: 158 RQADYFM 164
QAD F+
Sbjct: 199 EQAD-FI 204
>gi|320162088|ref|YP_004175313.1| hypothetical protein ANT_26870 [Anaerolinea thermophila UNI-1]
gi|319995942|dbj|BAJ64713.1| hypothetical protein ANT_26870 [Anaerolinea thermophila UNI-1]
Length = 271
Score = 37.4 bits (86), Expect = 0.81, Method: Composition-based stats.
Identities = 31/163 (19%), Positives = 55/163 (33%), Gaps = 35/163 (21%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
+IA+ IDG N + +L D+ L VI Y
Sbjct: 12 RIAMLIDGDN---AQPSLIGDM-----LAETSKYGTVIIRRIYG---------------- 47
Query: 67 LDWLHYN--GFQ-VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSG 121
DW N G++ V+ A + + K++ D + +DA + + +E + S
Sbjct: 48 -DWTTANMNGWKEVLQTYAIQPIQQFRYTIGKNATDSAMIIDAMDILYEDRVEGFCLVSS 106
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
D +T L ++ K + + S D F+
Sbjct: 107 DSDYTRLATRIREKG-----IFVMGIGKSTTPRAFVNACDVFV 144
>gi|302692520|ref|XP_003035939.1| hypothetical protein SCHCODRAFT_105541 [Schizophyllum commune H4-8]
gi|300109635|gb|EFJ01037.1| hypothetical protein SCHCODRAFT_105541 [Schizophyllum commune H4-8]
Length = 642
Score = 37.4 bits (86), Expect = 0.81, Method: Composition-based stats.
Identities = 8/36 (22%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS 150
+++ +GD F V+ L+R+ + +V + P
Sbjct: 12 TIILITGDRDFAYAVSLLRRR--RYNVVLICHAYPG 45
>gi|57237868|ref|YP_179116.1| hypothetical protein CJE1124 [Campylobacter jejuni RM1221]
gi|57166672|gb|AAW35451.1| conserved domain protein [Campylobacter jejuni RM1221]
Length = 180
Score = 37.4 bits (86), Expect = 0.81, Method: Composition-based stats.
Identities = 8/53 (15%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Query: 91 RKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTI 141
+ K +D+++ +D + +E +++ + D F V +++ V +
Sbjct: 96 DIKQKG-VDMKIGLDIATLANKHQVEKIILITSDSDFVPAVKHARKEGLIVQL 147
>gi|294617720|ref|ZP_06697343.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
[Enterococcus faecium E1679]
gi|291596031|gb|EFF27301.1| phosphoribosylaminoimidazole carboxylase, ATPase subunit
[Enterococcus faecium E1679]
Length = 374
Score = 37.4 bits (86), Expect = 0.81, Method: Composition-based stats.
Identities = 24/146 (16%), Positives = 48/146 (32%), Gaps = 28/146 (19%)
Query: 31 RKLLKA-FRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC 89
+LL+ F ++ A Y T V + D + G+ V K + +
Sbjct: 106 DRLLEKSFLETNNIVIAPYATIVSPTD---------IQDAIDGIGYPCVLKTTRGGYDGK 156
Query: 90 GRKRVKSSMDVELAVDAFEQSEGLEHLVI-----------FSGDGCFT--TLVAALQRKV 136
G+ +KS D+ A+D + + I +G G F +V +
Sbjct: 157 GQYVLKSRADLAPAMDLLREGTCVLEAWIPFEKEISIMVAGNGQGDFMTFPVVENIHHNN 216
Query: 137 KKVTIVSTVLSDPSMASDQLRRQADY 162
++ P+ + +A+
Sbjct: 217 ILHETIA-----PAAIDQDVIEEAER 237
>gi|302383830|ref|YP_003819653.1| hypothetical protein Bresu_2723 [Brevundimonas subvibrioides ATCC
15264]
gi|302194458|gb|ADL02030.1| conserved hypothetical protein [Brevundimonas subvibrioides ATCC
15264]
Length = 256
Score = 37.4 bits (86), Expect = 0.83, Method: Composition-based stats.
Identities = 25/160 (15%), Positives = 45/160 (28%), Gaps = 13/160 (8%)
Query: 5 REKIALFIDGANLYASSKALGFD----IDYRKL-LKAFRSRAIVIRAYYYTTVVGDPEQQ 59
R++ L++DG NL+ + L +D L + A + + + +
Sbjct: 25 RKRARLYVDGFNLHHAILDLNRHELLWLDLMALGRALLPPGERLTGAVWVSAHRPQRKDR 84
Query: 60 FSPLHPLLDWLHY------NGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA--FEQSE 111
+ L G VV + + DV LA+ ++
Sbjct: 85 MQAMMAYEAALVARDVRCLMGHFVVHGDHCHACGHQWMDATEKQSDVNLALSIAADAAAD 144
Query: 112 GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151
+ I + DG L IVS
Sbjct: 145 RFDTAYIVTTDGDHAATTRFLHESYPHKRIVSVAPPGRGH 184
>gi|158314589|ref|YP_001507097.1| hypothetical protein Franean1_2768 [Frankia sp. EAN1pec]
gi|158109994|gb|ABW12191.1| protein of unknown function DUF88 [Frankia sp. EAN1pec]
Length = 272
Score = 37.4 bits (86), Expect = 0.88, Method: Composition-based stats.
Identities = 33/167 (19%), Positives = 60/167 (35%), Gaps = 29/167 (17%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP--EQQFSP 62
R ++A+ ID N AS L++ + A + T V + +
Sbjct: 8 RARLAVLIDADNAQAS------------LVEHVLAE----VAMFGTAHVKRAYGDWTSTH 51
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
L D L + Q ++F G+ ++M ++ A+D +E L+ + S D
Sbjct: 52 LRSWKDQLLAHSIQ----PIQQFAHTSGKNATDAAMVID-AMDLLYGAE-LDGFCLISSD 105
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
FT L + L+ + V + S + D F + L
Sbjct: 106 SDFTRLASRLRESGRIVYGFGERKTPRSFVA-----ACDTFTYVENL 147
>gi|149928204|ref|ZP_01916449.1| hypothetical protein LMED105_00350 [Limnobacter sp. MED105]
gi|149823095|gb|EDM82335.1| hypothetical protein LMED105_00350 [Limnobacter sp. MED105]
Length = 211
Score = 37.4 bits (86), Expect = 0.89, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 85 FTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTI 141
FT + K ++ M V+LA ++ +V+ +GDG F++ L+ + V +
Sbjct: 109 FTPDSHPKGIELRMGVDLAT--LAYKRQVQQVVLLTGDGAFSSAAELLRHEGVDVVL 163
>gi|330836836|ref|YP_004411477.1| hypothetical protein Spico_0871 [Spirochaeta coccoides DSM 17374]
gi|329748739|gb|AEC02095.1| Domain of unknown function DUF88 [Spirochaeta coccoides DSM 17374]
Length = 265
Score = 37.4 bits (86), Expect = 0.90, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 94 VKSSMDVELAVDAFEQ----SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS 143
K+ D+ ++++A E + ++ V + D FT ++ L++ K+V +V+
Sbjct: 78 YKNRADLIISLEALETIITNTPSIDRYVFITSDSDFTVIMEMLRKYGKEVYLVT 131
>gi|226363405|ref|YP_002781187.1| hypothetical protein ROP_39950 [Rhodococcus opacus B4]
gi|226241894|dbj|BAH52242.1| hypothetical protein [Rhodococcus opacus B4]
Length = 208
Score = 37.4 bits (86), Expect = 0.91, Method: Composition-based stats.
Identities = 19/170 (11%), Positives = 56/170 (32%), Gaps = 35/170 (20%)
Query: 6 EKIALFIDGANLYASSKALGFDID------YRKLLKAFRSRAIVIRAYY----------- 48
+++A+ +D N++ +++ + LL +++A
Sbjct: 5 QRVAVVVDYQNMHLTARG---KFTPEGTPTHESLLHPLLLAQQILKARANAKGADTPPAD 61
Query: 49 ------YTTVVGDPEQQFSPLHP---LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMD 99
Y + + S +W + +V + + + + +D
Sbjct: 62 IAKVEVYRGLPSNEHDSTSYRRSQAQRAEWTRDSRVEVTYRPLRYRYVHNILTPQEKGVD 121
Query: 100 VELAVDAFE--QSEGLEHLVIFSGDGCFTTLVAAL----QRKVKKVTIVS 143
V +A++ + S + +++ + D + Q + +KV I +
Sbjct: 122 VLVALNFVQAVVSGEYDVVILAAHDTDLEPALEMALDTPQAQARKVAIET 171
>gi|114048298|ref|YP_738848.1| inorganic polyphosphate/ATP-NAD kinase [Shewanella sp. MR-7]
gi|123030438|sp|Q0HSW4|PPNK_SHESR RecName: Full=Probable inorganic polyphosphate/ATP-NAD kinase;
Short=Poly(P)/ATP NAD kinase
gi|113889740|gb|ABI43791.1| NAD(+) kinase [Shewanella sp. MR-7]
Length = 309
Score = 37.4 bits (86), Expect = 0.93, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 25/79 (31%), Gaps = 10/79 (12%)
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
L L WL G++V+ + G V AVD E + ++
Sbjct: 38 QTLKRLHHWLTVQGYEVLVEE--RVASELGTNIV--------AVDLLEIGARCDLAIVVG 87
Query: 121 GDGCFTTLVAALQRKVKKV 139
GDG L R V
Sbjct: 88 GDGNMLGAARVLARFDVGV 106
>gi|302549678|ref|ZP_07302020.1| dihydrolipoyl dehydrogenase [Streptomyces viridochromogenes DSM
40736]
gi|302467296|gb|EFL30389.1| dihydrolipoyl dehydrogenase [Streptomyces viridochromogenes DSM
40736]
Length = 470
Score = 37.0 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Query: 106 AFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVL 146
EQ E + +V+ SG G + V A Q K+V IV
Sbjct: 1 MVEQDERFDVVVLGSGPGGYVAAVRAAQ-LGKRVAIVEEKY 40
>gi|309811372|ref|ZP_07705159.1| conserved hypothetical protein [Dermacoccus sp. Ellin185]
gi|308434679|gb|EFP58524.1| conserved hypothetical protein [Dermacoccus sp. Ellin185]
Length = 186
Score = 37.0 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 31/173 (17%), Positives = 58/173 (33%), Gaps = 34/173 (19%)
Query: 10 LFIDGANLYAS------SKALGFDIDYR--KLLKAFRSR--AIVIRAYYYTTVVGDPEQQ 59
L IDG N+ A+ + D R +LLK + + ++ +
Sbjct: 8 LLIDGENIDATLGTSILGRRPHPDERPRWDRLLKFAQRQWHQDAKGLFFLAANGPELPMA 67
Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119
+ L G+Q + + G K V M ++ +DA + +++
Sbjct: 68 ------FIQALTALGYQPI-----PLSGAEGEKVV--DMAIQKTLDALVTLQA--DVMLV 112
Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVL----SDPSMASDQLRRQADYFMDLAY 168
S DG F + L +KV ++ + + L F DL +
Sbjct: 113 SHDGDFLPQLEPLLGGSRKVGLIGFKEFRNAGFSPLEAQGL-----EFFDLEH 160
>gi|298528011|ref|ZP_07015415.1| conserved hypothetical protein [Desulfonatronospira thiodismutans
ASO3-1]
gi|298511663|gb|EFI35565.1| conserved hypothetical protein [Desulfonatronospira thiodismutans
ASO3-1]
Length = 212
Score = 37.0 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 35/210 (16%), Positives = 77/210 (36%), Gaps = 57/210 (27%)
Query: 5 REKIALFIDGANLYASSKALGFD-IDY--RKLLK----AFRSRAIVIRAYYY-------- 49
K+ +F DG ++ + L + Y R++ + R + ++R YYY
Sbjct: 1 MRKVIIFTDG--MFMRRRVLERNHFLYKPREIREYCQKHLRQKDYLVRIYYYDCRPLQAR 58
Query: 50 -TTVVGDPEQQFSPL------HPLLDWLHY--------------------NGFQVVAKVA 82
T+ + E FS L H L + L + G +V +
Sbjct: 59 GTSPLNGKEIDFSRLESARLRHQLFEGLRHAPNFCLRLGNMEWNGRDWNIVGSKVSPLLK 118
Query: 83 KEFT-ENCGRKRVKSS-----MDVELAVDAFEQSEGL--EHLVIFSGDGCFTTLVAALQR 134
KE T ++ ++ + V++A+D + + V+ + + +++
Sbjct: 119 KEITVDDLSDSDIRPGSETTQISVKMALDMTTLAARKAGDMFVLITDRSDLVPAMEMVRQ 178
Query: 135 KVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
+ ++ + + + S +L QAD F+
Sbjct: 179 EGVQICL----DNMHAPVSSELSEQAD-FI 203
>gi|207092671|ref|ZP_03240458.1| hypothetical protein HpylHP_07376 [Helicobacter pylori
HPKX_438_AG0C1]
Length = 120
Score = 37.0 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 13/69 (18%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD-YFMDLAYLKNEI 173
+++FS D F ++ A K +V ++ + P L++ D +A + ++
Sbjct: 31 CILLFSKDTDFVPVLEAAWEKGFEV-FIAKIKESPISVPSDLKKSCDVRERSVAEIVAKL 89
Query: 174 ARDPDEDKK 182
+ KK
Sbjct: 90 PKSQHSPKK 98
>gi|21360722|gb|AAM49675.1| phoshoribosylaminoimiazolcarboxylase ATPase subunit [Enterococcus
faecium]
gi|21360724|gb|AAM49676.1| phoshoribosylaminoimiazolcarboxylase ATPase subunit [Enterococcus
faecium]
gi|21360726|gb|AAM49677.1| phoshoribosylaminoimiazolcarboxylase ATPase subunit [Enterococcus
faecium]
gi|21360730|gb|AAM49679.1| phoshoribosylaminoimiazolcarboxylase ATPase subunit [Enterococcus
faecium]
gi|21360732|gb|AAM49680.1| phoshoribosylaminoimiazolcarboxylase ATPase subunit [Enterococcus
faecium]
gi|21360734|gb|AAM49681.1| phoshoribosylaminoimiazolcarboxylase ATPase subunit [Enterococcus
faecium]
gi|21360738|gb|AAM49683.1| phoshoribosylaminoimiazolcarboxylase ATPase subunit [Enterococcus
faecium]
gi|21360742|gb|AAM49685.1| phoshoribosylaminoimiazolcarboxylase ATPase subunit [Enterococcus
faecium]
Length = 164
Score = 37.0 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 25/146 (17%), Positives = 49/146 (33%), Gaps = 28/146 (19%)
Query: 31 RKLLKA-FRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC 89
+LL+ F ++ A Y T V + D + G+ V K + +
Sbjct: 27 DRLLEKSFLETNNIVIAPYATIVSPTD---------IQDAIDGIGYPCVLKTTRGGYDGK 77
Query: 90 GRKRVKSSMDVELAVDAFEQSEGLEHLVI-----------FSGDGCFT--TLVAALQRKV 136
G+ +KS D+ A+D + + I +G G FT +V +
Sbjct: 78 GQYVLKSRADLAPAMDLLREGTCVLEAWIPFEKEISIMVAGNGQGDFTTFPVVENIHHNN 137
Query: 137 KKVTIVSTVLSDPSMASDQLRRQADY 162
++ P+ + +A+
Sbjct: 138 ILHETIA-----PAAIDQDVIEEAER 158
>gi|317508053|ref|ZP_07965739.1| 3-phosphoshikimate 1-carboxyvinyltransferase [Segniliparus rugosus
ATCC BAA-974]
gi|316253649|gb|EFV13033.1| 3-phosphoshikimate 1-carboxyvinyltransferase [Segniliparus rugosus
ATCC BAA-974]
Length = 377
Score = 37.0 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 39/116 (33%), Gaps = 13/116 (11%)
Query: 35 KAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRV 94
K+ +RA+V+ A + + +LD L G V + +
Sbjct: 66 KSITNRALVLAALASSPSRIVGTLRSRDTDLMLDALRRMGAGVRIHDDQTTVDIEPGPLR 125
Query: 95 KSSMDVELAVDAFEQSEGLEHLVIFSG----DGC-------FTTLVAALQRKVKKV 139
++S+DV LA + +G DG T++ AL+ V
Sbjct: 126 EASVDVGLAGTVMRFLPP--AAALATGAVSFDGDEQARARPLDTILNALRDLGVAV 179
>gi|256833264|ref|YP_003161991.1| hypothetical protein Jden_2050 [Jonesia denitrificans DSM 20603]
gi|256686795|gb|ACV09688.1| conserved hypothetical protein [Jonesia denitrificans DSM 20603]
Length = 192
Score = 37.0 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 30/166 (18%), Positives = 56/166 (33%), Gaps = 20/166 (12%)
Query: 10 LFIDGANLYASSKALGFDI-------DYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
L +DG N+ A+ LG ++ D R A + T +
Sbjct: 14 LLVDGENIDAT---LGMNVLGHRPNPDERPRWDRISEFARELWGQSVTKLFFLNASSGQM 70
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
P + L ++ + + K V M ++ +DA + +++ S D
Sbjct: 71 PMPFVQALLAMDYRPI-----PLSGENHEKVV--DMGIQRTLDAIR--DRDADVLLASHD 121
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
G F + AL +KV ++ + + L + F DL
Sbjct: 122 GDFIPQIEALLDGTRKVGLLCFREFVNAQMAQ-LEDKGLTFYDLED 166
>gi|325265006|ref|ZP_08131733.1| NADH oxidase [Clostridium sp. D5]
gi|324029696|gb|EGB90984.1| NADH oxidase [Clostridium sp. D5]
Length = 658
Score = 37.0 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 8/74 (10%)
Query: 101 ELAV---DAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLR 157
E+AV D +E + VI G L K KKVT++ + + ++++
Sbjct: 505 EIAVQSKDILTGAECGDQAVIIGGGSVGCETAEYLAEKGKKVTVIELLDTP----AEKMV 560
Query: 158 RQADYFMDLAYLKN 171
A + L++LK
Sbjct: 561 NVA-RTILLSHLKG 573
>gi|91772560|ref|YP_565252.1| hypothetical protein Mbur_0520 [Methanococcoides burtonii DSM 6242]
gi|91711575|gb|ABE51502.1| Hypothetical protein Mbur_0520 [Methanococcoides burtonii DSM 6242]
Length = 262
Score = 37.0 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 27/172 (15%), Positives = 54/172 (31%), Gaps = 33/172 (19%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
+ +K+A+ ID N+++S + L Y
Sbjct: 5 ESHDKLAVLIDADNVHSSI--------IKGLFDEIAK---------YGIASVKRLYGDWT 47
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSM-DVELAVDAFEQ--SEGLEHLVIF 119
L +W N + ++F+ K + D L +DA + + L+ I
Sbjct: 48 GPQLSNW-KDNLHIYSIQPIQQFS-----YTAKKNATDSALIIDAMDLLYTRNLDGFCIV 101
Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADYFMDLAYLK 170
S D +T L ++ + V + R + F+ + L+
Sbjct: 102 SSDSDYTKLCQRIRESG------AFVYGFGEKKTPEAFRAACNKFIYVENLR 147
>gi|254443296|ref|ZP_05056772.1| hypothetical protein VDG1235_1532 [Verrucomicrobiae bacterium
DG1235]
gi|198257604|gb|EDY81912.1| hypothetical protein VDG1235_1532 [Verrucomicrobiae bacterium
DG1235]
Length = 242
Score = 37.0 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 31/165 (18%), Positives = 56/165 (33%), Gaps = 29/165 (17%)
Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
E IAL ID N A+ ID+ ++ S V Y +
Sbjct: 7 SSESIALLIDADNAPAA------KIDF--IIAELASYGSVDIRRAYGNWKKAALSGWE-- 56
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSG 121
+V+ A + ++ + K++ D+ L ++A + ++ L + S
Sbjct: 57 ------------KVLHDYAIQPIQHFDIVKGKNASDMGLLIEAMDILYTKNLGTFCLVSS 104
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
D FT LV L+ K+V + + F+ L
Sbjct: 105 DCDFTPLVLRLRADGKQVIGFGDAKTPAPFVA-----SCTRFLYL 144
>gi|147920970|ref|YP_685221.1| hypothetical protein RCIX466 [uncultured methanogenic archaeon
RC-I]
gi|110620617|emb|CAJ35895.1| conserved hypothetical protein [uncultured methanogenic archaeon
RC-I]
Length = 254
Score = 36.6 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 24/136 (17%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
+ IA+ IDG N + +L ++L V Y + S
Sbjct: 9 SSNKNIAMLIDGDN---AQPSL-----IEEMLSEAGKYGNVTVRRIY------GDWTMSS 54
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
++ D+LH + FQ ++F G+ D + +DA + + ++ I S
Sbjct: 55 MNSWKDYLHKHAFQ----PIQQFRYTKGKNAT----DSAMIIDAMDILYAGHVDGFCIVS 106
Query: 121 GDGCFTTLVAALQRKV 136
D +T L L+
Sbjct: 107 SDSDYTKLATRLRESG 122
>gi|257791681|ref|YP_003182287.1| hypothetical protein Elen_1934 [Eggerthella lenta DSM 2243]
gi|317487854|ref|ZP_07946446.1| hypothetical protein HMPREF1023_00144 [Eggerthella sp. 1_3_56FAA]
gi|325830636|ref|ZP_08164057.1| hypothetical protein HMPREF9404_5483 [Eggerthella sp. HGA1]
gi|257475578|gb|ACV55898.1| protein of unknown function DUF88 [Eggerthella lenta DSM 2243]
gi|316912980|gb|EFV34497.1| hypothetical protein HMPREF1023_00144 [Eggerthella sp. 1_3_56FAA]
gi|325487382|gb|EGC89824.1| hypothetical protein HMPREF9404_5483 [Eggerthella sp. HGA1]
Length = 552
Score = 36.6 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 56/170 (32%), Gaps = 31/170 (18%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRK-LLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
++ AL ID N+ S+K Y K + V Y + +
Sbjct: 6 SSEKRFALLIDADNV--SAK-------YIKPITDELSKYGTVTYKRIY------GDWTLT 50
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIF 119
D L N ++F G + K++ D + +DA + + +E I
Sbjct: 51 LHAKWKDALLENSIT----PIQQF----GYTQGKNATDSAMIIDAMDILYTRSVEGFCIV 102
Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
S D FT L + ++ V + + R+ D F L L
Sbjct: 103 SSDSDFTRLASRIRESGLTVIGMGEKKTPTPF-----RKACDIFTTLELL 147
>gi|25029253|ref|NP_739307.1| hypothetical protein CE2697 [Corynebacterium efficiens YS-314]
gi|23494541|dbj|BAC19507.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
Length = 234
Score = 36.6 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 27/121 (22%), Positives = 42/121 (34%), Gaps = 25/121 (20%)
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG------LEHLV 117
P ++ L GF V AK + TE+ DV+ D L +V
Sbjct: 98 RPWVEALRNVGFAVFAKP--KLTEDS---------DVD--EDMLAHIRRRFEEGVLRGVV 144
Query: 118 IFSGDG-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
+ S DG F L+ L T++ + + A F+DL + R+
Sbjct: 145 VASADGQNFRELLEELTGDGIPATVIGFHEHASWAVAHE----AIEFVDLEEIAGVF-RE 199
Query: 177 P 177
P
Sbjct: 200 P 200
>gi|323484352|ref|ZP_08089719.1| hypothetical protein HMPREF9474_01470 [Clostridium symbiosum
WAL-14163]
gi|323692362|ref|ZP_08106599.1| maebl [Clostridium symbiosum WAL-14673]
gi|323402346|gb|EGA94677.1| hypothetical protein HMPREF9474_01470 [Clostridium symbiosum
WAL-14163]
gi|323503582|gb|EGB19407.1| maebl [Clostridium symbiosum WAL-14673]
Length = 298
Score = 36.6 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 38/182 (20%), Positives = 58/182 (31%), Gaps = 29/182 (15%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
D ++KIA+ ID N+ SK Y KL+ Y + GD
Sbjct: 2 DKQDKIAVLIDAENV---SKK------YIKLI---MDEVSDYGIATYKRIYGDFTN--PS 47
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
+ D L +F G+ D L +DA + S + + +
Sbjct: 48 VMAWQDALRDFALT----PVFQFNYTKGKNAS----DSALIIDAMDILYSGKVNGFCLVT 99
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
D FT L L+ V + + L + F L L E + ED
Sbjct: 100 SDSDFTKLAIRLREAGMIVIGMGEQK-----TPNSLVSACETFKFLDLLYQESLEEQAED 154
Query: 181 KK 182
+K
Sbjct: 155 EK 156
>gi|259505747|ref|ZP_05748649.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
gi|259166655|gb|EEW51209.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
Length = 228
Score = 36.6 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 27/121 (22%), Positives = 42/121 (34%), Gaps = 25/121 (20%)
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG------LEHLV 117
P ++ L GF V AK + TE+ DV+ D L +V
Sbjct: 92 RPWVEALRNVGFAVFAKP--KLTEDS---------DVD--EDMLAHIRRRFEEGVLRGVV 138
Query: 118 IFSGDG-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
+ S DG F L+ L T++ + + A F+DL + R+
Sbjct: 139 VASADGQNFRELLEELTGDGIPATVIGFHEHASWAVAHE----AIEFVDLEEIAGVF-RE 193
Query: 177 P 177
P
Sbjct: 194 P 194
>gi|167770975|ref|ZP_02443028.1| hypothetical protein ANACOL_02329 [Anaerotruncus colihominis DSM
17241]
gi|167667015|gb|EDS11145.1| hypothetical protein ANACOL_02329 [Anaerotruncus colihominis DSM
17241]
Length = 286
Score = 36.6 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 30/82 (36%), Gaps = 7/82 (8%)
Query: 92 KRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDP 149
K+S D + +DA + S ++ I S D FT L A L+ V + +
Sbjct: 76 TTGKNSTDSAMIIDAMDILYSGQVDGFCIVSSDSDFTRLAARLRESGMIVVGMGERKTPK 135
Query: 150 SMASDQLRRQADYFMDLAYLKN 171
S S + F L L
Sbjct: 136 SFIS-----ACNRFKYLDILAQ 152
>gi|317177894|dbj|BAJ55683.1| hypothetical protein HPF16_1086 [Helicobacter pylori F16]
Length = 221
Score = 36.6 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 12/47 (25%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
+++FS D F ++ A K +V ++ + DP++ LR+ D
Sbjct: 132 CILLFSKDTNFVPVLEAAWEKGFEV-FIANIQKDPNLVPPDLRKSCD 177
>gi|317012923|gb|ADU83531.1| hypothetical protein HPLT_05705 [Helicobacter pylori Lithuania75]
Length = 255
Score = 36.6 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 10/47 (21%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
+++FS D F ++ A K +V ++ + P++ L+ D
Sbjct: 165 CILLFSKDTDFVPVLEAAWEKGFEV-FIAKIEESPNLVPPDLKDPCD 210
>gi|300716144|ref|YP_003740947.1| isochorismatase family protein RutB [Erwinia billingiae Eb661]
gi|299061980|emb|CAX59096.1| Putative isochorismatase family protein RutB [Erwinia billingiae
Eb661]
Length = 248
Score = 36.6 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 28/166 (16%), Positives = 53/166 (31%), Gaps = 35/166 (21%)
Query: 2 FDPREKIALFIDGANLYASSKAL----GFDI--------DYRKLLKAFRSRAIVIRAYYY 49
F P + + +D N YA++ GFD+ + +KA R I+I +
Sbjct: 29 FPPEQTALIVVDMQNAYATTGGYLDLAGFDVSATRPVIDNINVAVKAAREAGILII---W 85
Query: 50 TTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAV----- 104
D + +W N K ++ E G+ K D +L
Sbjct: 86 FQNGWDDRYVEAGGPGSPNWHKSN----ALKTMRQNPELEGKLLAKGGWDYDLVDQLVPQ 141
Query: 105 --DAFEQSEGLEHLVIFSGDGCFTTLVAA-LQRKVKKVTIVSTVLS 147
D G F T + + L+ + + + + + +
Sbjct: 142 PGDIVLPKPRY--------SGFFNTALDSMLRSRGIRHLVFTGIAT 179
>gi|85090418|ref|XP_958407.1| cation-transporting ATPase 4 [Neurospora crassa OR74A]
gi|28919767|gb|EAA29171.1| cation-transporting ATPase 4 [Neurospora crassa OR74A]
Length = 1318
Score = 36.6 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 36/99 (36%), Gaps = 21/99 (21%)
Query: 29 DYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDW-----LHYNGFQVVAKVAK 83
DY + K F R + A Y + + E S ++ L L + GF V+ K
Sbjct: 657 DYEETYKYFTRRGSRVLALAYKQLSTENELGASKINDLKRENVEADLTFAGFLVLQCPLK 716
Query: 84 EFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
E D + AV +S +V+ +GD
Sbjct: 717 E--------------DAKQAVQMLNESSH--RVVMITGD 739
>gi|167590489|ref|ZP_02382877.1| NADH-flavin oxidoreductase/NADH oxidase [Burkholderia ubonensis Bu]
Length = 673
Score = 36.6 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 38/91 (41%), Gaps = 9/91 (9%)
Query: 69 WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTL 128
L G ++++ V ++ G +A+D EQ+ ++++VI +G L
Sbjct: 584 ALKARGVRMLSSVTYRRIDDDGFH---------VAIDGVEQTLPVDNVVICAGQEPLREL 634
Query: 129 VAALQRKVKKVTIVSTVLSDPSMASDQLRRQ 159
LQ + + ++ V + + + RQ
Sbjct: 635 AEQLQAAGRTIHLIGGVCEAAELDAKRAIRQ 665
>gi|300702658|ref|YP_003744258.1| hypothetical protein RCFBP_10301 [Ralstonia solanacearum CFBP2957]
gi|299070319|emb|CBJ41611.1| conserved protein of unknown function [Ralstonia solanacearum
CFBP2957]
Length = 309
Score = 36.6 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 30/201 (14%), Positives = 59/201 (29%), Gaps = 49/201 (24%)
Query: 7 KIALFIDGANLYASS------------KALGFDIDYRKLL----KAFRSRAIVIRAYYYT 50
+ +++DG N Y K + L+ + RS + ++T
Sbjct: 12 RTRVYVDGYNFYYGCLKGTHHKWLDLYKLFQEHVLPSALIERDGQYVRSELLTEAVQFFT 71
Query: 51 TVVGDPEQQF-----------SPLHPLLDWLHYN--GFQVVAKVAKEFTENCG------- 90
+ + + + L D G+ VAK +
Sbjct: 72 ATIIERAAKAHDSVSSQARYHTALRKRHDGRIRIVEGYYSVAKARAPRIDAAKPDAWPRD 131
Query: 91 ------RKRVKSSMDVELAV----DAFEQSEGLEHLVIFSGDGCFTTLVAALQ-RKVKKV 139
+ + DV LA+ DA ++H+VI S D + ++ V
Sbjct: 132 CERVPIWRLEEKQTDVNLALHAYHDAMTA--QVDHVVIASNDTDLVPALRMIREHTSVTV 189
Query: 140 TIVSTVLSDPSMASDQLRRQA 160
+V ++ L + A
Sbjct: 190 GLVIPTRDSERRPNEDLAKYA 210
>gi|323455527|gb|EGB11395.1| hypothetical protein AURANDRAFT_8184 [Aureococcus anophagefferens]
Length = 135
Score = 36.6 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 24/71 (33%), Gaps = 7/71 (9%)
Query: 99 DVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
D L +DA + S + V+ S D FT L ++ V V +
Sbjct: 70 DSALIIDAMDLLHSNRYQAFVLVSSDADFTRLATRIREHPSTVVGVGRAQTPKGFV---- 125
Query: 157 RRQADYFMDLA 167
+ F+ +
Sbjct: 126 -NACNAFITIE 135
>gi|222823150|ref|YP_002574723.1| hypothetical protein Cla_0106 [Campylobacter lari RM2100]
gi|222538371|gb|ACM63472.1| conserved hypothetical protein [Campylobacter lari RM2100]
Length = 240
Score = 36.6 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 15/91 (16%), Positives = 31/91 (34%), Gaps = 16/91 (17%)
Query: 67 LDWLHYNGFQVVAKVAKEFT---------------ENCGRKRVKS-SMDVELAVDAFEQS 110
L + N FQ K K+F + R K M + L +
Sbjct: 119 LGEIDENSFQWKIKDYKKFQQLLQKEIKIDSLTEDDFVLDIRQKGVDMKIGLDIATLSIK 178
Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTI 141
+ +E +++ + D F + +++ V +
Sbjct: 179 KQIEKIILITADSDFIPAIKHARKEGVIVQL 209
>gi|298345622|ref|YP_003718309.1| hypothetical protein HMPREF0573_10496 [Mobiluncus curtisii ATCC
43063]
gi|304390689|ref|ZP_07372642.1| conserved hypothetical protein [Mobiluncus curtisii subsp. curtisii
ATCC 35241]
gi|315654221|ref|ZP_07907129.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333]
gi|315657881|ref|ZP_07910761.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii
ATCC 35242]
gi|298235683|gb|ADI66815.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 43063]
gi|304326445|gb|EFL93690.1| conserved hypothetical protein [Mobiluncus curtisii subsp. curtisii
ATCC 35241]
gi|315491256|gb|EFU80873.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333]
gi|315491678|gb|EFU81289.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii
ATCC 35242]
Length = 191
Score = 36.6 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 59/179 (32%), Gaps = 39/179 (21%)
Query: 10 LFIDGANLYASSK--ALGFDIDYR------KLLKAFRS--RAIVIRAYYYTTVVGDPEQQ 59
L +DG N+ A+ LG D ++ ++ P
Sbjct: 13 LLVDGENIDATLGLSVLGRRPDPDERPRWDRVRDYVSETFPGQTKGLFFLNASAHMPMT- 71
Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVEL-----AVDAFEQSEGLE 114
+ L +Q + +R + +DV + A+D +
Sbjct: 72 ------FVQALLAMNYQPI---------PLASERDEKVVDVGIQRTLEAID----KQEYG 112
Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
++V+ S DG F + +L R VT+V S +LR + + + L+ EI
Sbjct: 113 NVVLVSHDGDFEPQLRSLLRNDHDVTVVGF----EEFLSGELRTLEESGLKIVDLEREI 167
>gi|149908210|ref|ZP_01896874.1| hypothetical protein PE36_01852 [Moritella sp. PE36]
gi|149808752|gb|EDM68685.1| hypothetical protein PE36_01852 [Moritella sp. PE36]
Length = 304
Score = 36.6 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 29/164 (17%), Positives = 55/164 (33%), Gaps = 32/164 (19%)
Query: 9 ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68
A+ +D N + DY +L+ V + Y DP Q+ D
Sbjct: 8 AVLVDAENASHN--------DYLAMLEEVEKYGTVAIKWVY-ADWTDPHQKAWK-----D 53
Query: 69 WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLEHLVIFSGDGCF 125
L + + ++F K + D L +DA E + + + I S DG F
Sbjct: 54 IL----HETASSPKQQF------HYGKDAADHALMMDAIEVTNNNSRVNAVCIVSSDGGF 103
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
++ ++ V + ++ R+ F+ + L
Sbjct: 104 YSVAQRIREYGIHVMAIG-----KKNTPERFRKACHNFVFIDNL 142
>gi|289614411|emb|CBI58805.1| putative cation-transporting ATPase 4 [Sordaria macrospora]
Length = 1345
Score = 36.3 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 57/164 (34%), Gaps = 40/164 (24%)
Query: 29 DYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDW-----LHYNGFQVVAKVAK 83
DY + K F R + A Y + + E S ++ L L + GF V+ K
Sbjct: 685 DYEETYKYFTRRGSRVLALAYKQLTTENELGSSKINDLKRENVEADLTFAGFLVLQCPLK 744
Query: 84 EFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIV- 142
E D + AV +S +V+ +GD T V + +V IV
Sbjct: 745 E--------------DAKQAVQMLNESSH--RVVMITGDNPLT-AVHVAR----EVEIVD 783
Query: 143 --STVLSDPSMASD---QLR-RQADYFMDLAYLKNEIARDPDED 180
+L P ++ +L R D K I DP +
Sbjct: 784 RDVLILDSPEHSAHGEEKLIWRSVDD-------KVNIEVDPTKP 820
>gi|317182397|dbj|BAJ60181.1| hypothetical protein HPF57_1107 [Helicobacter pylori F57]
Length = 87
Score = 36.3 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 11/45 (24%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
++FS D F ++ A K +V ++ + P++ LR+ D
Sbjct: 1 MLFSKDTDFVPVLEAAWEKGFEV-FIANIQEGPNLVLPDLRKSCD 44
>gi|188527929|ref|YP_001910616.1| hypothetical protein HPSH_05910 [Helicobacter pylori Shi470]
gi|188144169|gb|ACD48586.1| hypothetical protein HPSH_05910 [Helicobacter pylori Shi470]
Length = 266
Score = 36.3 bits (83), Expect = 1.7, Method: Composition-based stats.
Identities = 10/46 (21%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160
+++FS D F ++ A K +V ++ + P++ LR+
Sbjct: 178 CILLFSKDTDFVPVLEAAWEKGFEV-FIANIQEGPNLVPPDLRKSC 222
>gi|46578508|ref|YP_009316.1| hypothetical protein DVU0091 [Desulfovibrio vulgaris str.
Hildenborough]
gi|120603909|ref|YP_968309.1| hypothetical protein Dvul_2871 [Desulfovibrio vulgaris DP4]
gi|46447919|gb|AAS94575.1| conserved hypothetical protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|120564138|gb|ABM29882.1| conserved hypothetical protein [Desulfovibrio vulgaris DP4]
gi|311232435|gb|ADP85289.1| protein of unknown function DUF88 [Desulfovibrio vulgaris RCH1]
Length = 240
Score = 36.3 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 25/160 (15%), Positives = 43/160 (26%), Gaps = 29/160 (18%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
++A+ ID N A + LL + Y Q +
Sbjct: 2 RLAVLIDADNAKADA--------ISDLLAEVSKFGVATVKRAYGDWTTTNLQGWKKQLH- 52
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124
K A + + R K+S D + +D + + + I S D
Sbjct: 53 -------------KYAIQPMQQFSYTRGKNSTDASMIIDGMDLLYTGNFDGFCIVSSDCD 99
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
FT L + V + + D F+
Sbjct: 100 FTRLATRFREAGLSVYGFGEKKTPEPFVA-----ACDRFI 134
>gi|239616633|ref|YP_002939955.1| DNA polymerase I [Kosmotoga olearia TBF 19.5.1]
gi|239505464|gb|ACR78951.1| DNA polymerase I [Kosmotoga olearia TBF 19.5.1]
Length = 896
Score = 36.3 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 25/157 (15%), Positives = 48/157 (30%), Gaps = 30/157 (19%)
Query: 17 LYASSKALGFDI-------DYRKL---LKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
+Y +++ L I DY K R + Y +
Sbjct: 36 VYGTARMLSRFIKNYIAEGDYALFAFDRKEATHRHDLFEG--YKATRAEMPDALVAQLKY 93
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126
+ L GF + +++ D+ +A + + + +VI SGD
Sbjct: 94 IPDLVE-GFGIKFHSV---------ATLEAD-DI-IATAVTKYRDKFDEIVIVSGDKDIL 141
Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163
LV +KV ++ V + R+ + F
Sbjct: 142 QLVD------EKVKVLRFVSGLTDLEEYDRRKVEEKF 172
>gi|110596945|ref|ZP_01385235.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031]
gi|110341632|gb|EAT60092.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031]
Length = 247
Score = 36.3 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 26/170 (15%), Positives = 52/170 (30%), Gaps = 29/170 (17%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
+ E++A+ ID N + A+ LL A
Sbjct: 4 EKTERLAVLIDADN---TQPAI-----IEGLLAEVAKYG---TANVKRIYGDWTTTALRG 52
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
+V+ + + + + G + K++ D + +DA + + + I S
Sbjct: 53 WK-----------EVLLEFSIQPIQQFGYTKGKNATDSAMIIDAMDLLYTGKFQGFCIVS 101
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
D FT L + ++ V + S D F+ L+
Sbjct: 102 SDSDFTKLASRIRESGLTVYGFGEKKTPGPFVS-----ACDKFIYTEVLR 146
>gi|237708343|ref|ZP_04538824.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|229457564|gb|EEO63285.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
Length = 234
Score = 36.3 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 29/78 (37%), Gaps = 7/78 (8%)
Query: 99 DVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
D+ L +DA + + + + DG ++ L ++ KV + L
Sbjct: 80 DIALVIDAMDILRDGRADCFCLVASDGDYSLLAQRIREAGLKV-----LGYGEGKTPVSL 134
Query: 157 RRQADYFMDLAYLKNEIA 174
R F+ +N+I+
Sbjct: 135 VRSCSVFLYADRKENKIS 152
>gi|222624986|gb|EEE59118.1| hypothetical protein OsJ_10996 [Oryza sativa Japonica Group]
Length = 1004
Score = 36.3 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 39/109 (35%), Gaps = 15/109 (13%)
Query: 57 EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEH- 115
H ++ L GF F R R K D ++ VD + ++
Sbjct: 29 RDPHRVAHGVIAALAAAGFP---GPVSIFAYGRRRPRAKDGTDKKMLVDMLFWA--FDNP 83
Query: 116 ----LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160
++ SGD F+ L+ L+ K +L+ PS S ++ A
Sbjct: 84 PPGNYLLISGDQDFSDLLHRLRMKR-----YGILLAQPSNVSSRVLAAA 127
>gi|304407033|ref|ZP_07388687.1| dihydrolipoamide dehydrogenase [Paenibacillus curdlanolyticus YK9]
gi|304344020|gb|EFM09860.1| dihydrolipoamide dehydrogenase [Paenibacillus curdlanolyticus YK9]
Length = 493
Score = 36.3 bits (83), Expect = 2.0, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 7/61 (11%)
Query: 109 QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIV------STVLSDPSMASDQLRRQADY 162
+ ++ V+ G G +T + A Q + K+ I+ T L + S L R AD
Sbjct: 18 MAIEVDVAVLGGGPGGYTAAIRAAQ-QGKRTAIIEMSKLGGTCLHQGCIPSKSLLRSADV 76
Query: 163 F 163
+
Sbjct: 77 Y 77
>gi|320094623|ref|ZP_08026386.1| hypothetical protein HMPREF9005_0998 [Actinomyces sp. oral taxon
178 str. F0338]
gi|319978441|gb|EFW10021.1| hypothetical protein HMPREF9005_0998 [Actinomyces sp. oral taxon
178 str. F0338]
Length = 190
Score = 36.3 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 41/108 (37%), Gaps = 16/108 (14%)
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVEL--AVDAFEQSEGLEHLVIFSGD 122
+ L + V+ G + +K +DV L +DA + E +++ S D
Sbjct: 70 GFVQALTAMDYAVI--------PLSGPEDMKV-VDVGLQRTMDAIVKLER-GSVILASHD 119
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
F + AL ++V ++ S QL D +++ L+
Sbjct: 120 ADFVPQIEALLDAGRRVGVMCF----REFLSSQLHDLVDRGLEIIDLE 163
>gi|320166337|gb|EFW43236.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 428
Score = 36.3 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 20/114 (17%), Positives = 41/114 (35%), Gaps = 7/114 (6%)
Query: 22 KALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKV 81
+AL ++ LL+ F + + Y++T+ L + + +K
Sbjct: 17 QALNHFVN---LLEHF-CGSRFVEVYFFTSAPDTVGPAPLHARLRLAQIKPCISPLKSKN 72
Query: 82 AK-EFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAAL 132
V++ +DV LA + L L + +GDG F ++ +
Sbjct: 73 VTCTHCNAHFSTVVQAGVDVALATKVLTLVGEKALTGLFLLTGDGDFKEMLHYV 126
>gi|296125472|ref|YP_003632724.1| hypothetical protein Bmur_0422 [Brachyspira murdochii DSM 12563]
gi|296017288|gb|ADG70525.1| protein of unknown function DUF88 [Brachyspira murdochii DSM 12563]
Length = 455
Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 31/158 (19%), Positives = 65/158 (41%), Gaps = 28/158 (17%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
+KI ++ID N+ + L F ++ + +LK YY + D + FS
Sbjct: 1 MKKIGIYIDLENI----RYLDFHVNLKSMLKNILD--------YYKEQLKDEDIVFSIKK 48
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGR-------KRVKSSMDVELAVDAFE---QSEGLE 114
D + + K AK + K+ K+ D++ ++DAFE + ++
Sbjct: 49 AYGDS------KSIKKYAKHLRDLHIDIIHSVPFKKAKNMADMKSSLDAFEDFIIYKKID 102
Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMA 152
++ + D ++ ++ L R V++V+T +
Sbjct: 103 IIIFVTKDVDYSIVMDKLMRHGCIVSMVTTSDNFEKNI 140
>gi|78188294|ref|YP_378632.1| hypothetical protein Cag_0316 [Chlorobium chlorochromatii CaD3]
gi|78170493|gb|ABB27589.1| conserved hypothetical protein [Chlorobium chlorochromatii CaD3]
Length = 264
Score = 35.9 bits (82), Expect = 2.2, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 35/93 (37%), Gaps = 7/93 (7%)
Query: 83 KEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVT 140
+ + G + K++ D + +DA + + I S D FT L + ++ V
Sbjct: 64 IQPIQQFGYTKGKNATDSAMIIDAMDLLYTGKFHGFCIVSSDSDFTKLASRIREAGLVVY 123
Query: 141 IVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
+ + S D F+ + L+ +I
Sbjct: 124 GFGEKKTPSAFVS-----ACDKFIYIEVLRAKI 151
>gi|291545850|emb|CBL18958.1| Protein of unknown function DUF88 [Ruminococcus sp. SR1/5]
Length = 185
Score = 35.9 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 31/82 (37%), Gaps = 8/82 (9%)
Query: 102 LAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQ 159
+ +DA + S ++ I S D FT L A L+ V + + S
Sbjct: 1 MIIDAMDILYSGNVDGYCIVSSDSDFTRLAARLRESGMLVLGMGEEKTPKPFIS-----A 55
Query: 160 ADYFMDLAYL-KNEIARDPDED 180
+ F L L +N+ + ED
Sbjct: 56 CNQFKYLDLLYRNQQEEEKKED 77
>gi|148905892|gb|ABR16108.1| unknown [Picea sitchensis]
Length = 593
Score = 35.9 bits (82), Expect = 2.3, Method: Composition-based stats.
Identities = 10/47 (21%), Positives = 19/47 (40%), Gaps = 3/47 (6%)
Query: 99 DVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIV 142
D + VD F + +++ SGD F + L ++ V +
Sbjct: 122 DKAILVDMFLFALDNPPPSTILLISGDVDFAPALHKLGQRGYTVVLA 168
>gi|323439278|gb|EGA97003.1| hypothetical protein SAO11_1871 [Staphylococcus aureus O11]
gi|323442519|gb|EGB00147.1| hypothetical protein SAO46_1439 [Staphylococcus aureus O46]
Length = 78
Score = 35.9 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 10/67 (14%), Positives = 24/67 (35%), Gaps = 2/67 (2%)
Query: 98 MDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL- 156
M + L + + ++ +++ +GD F + + + S + S +
Sbjct: 1 MKIGLDIASLSFKHQVDKIILIAGDSDFVPAAKLARTEGIDFVLDSLGADIRNNLSLHID 60
Query: 157 -RRQADY 162
RR D
Sbjct: 61 GRRTCDE 67
>gi|205356564|ref|ZP_03223327.1| hypothetical protein Cj8421_0189 [Campylobacter jejuni subsp.
jejuni CG8421]
gi|205345569|gb|EDZ32209.1| hypothetical protein Cj8421_0189 [Campylobacter jejuni subsp.
jejuni CG8421]
Length = 683
Score = 35.9 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 57/165 (34%), Gaps = 29/165 (17%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
+ IA+FID N+ +K D VI Y GD Q+ +
Sbjct: 3 NKSIAIFIDAENI--PAKYAKSIFDI------ASDYGEVIIKRIY----GDWTQKN--IQ 48
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122
+ + + ++A F N K+S D+ L + + ++ VI S D
Sbjct: 49 GWREQIAE--YSLIAMQQFNFAAN------KNSSDMYLITEIMSIFYEKNIDIFVIVSSD 100
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
+T+L+ L+ K+V + S S F L
Sbjct: 101 SDYTSLIQKLRENKKQVIGMGLEKSIKSYV-----NAFSEFFYLD 140
>gi|317121267|ref|YP_004101270.1| DNA polymerase I [Thermaerobacter marianensis DSM 12885]
gi|315591247|gb|ADU50543.1| DNA polymerase I [Thermaerobacter marianensis DSM 12885]
Length = 1060
Score = 35.9 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 43/133 (32%), Gaps = 29/133 (21%)
Query: 48 YYTTVVGDPEQQFSPLHPLL-DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA 106
Y + + P PL+ D L G V E + G ++
Sbjct: 79 AYKGHRPEQPDELRPQFPLVKDVLAAMGVATVEHEGFEADDLLGTLAHRAR--------- 129
Query: 107 FEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
+ G++ +++ +GD LQ V ++ T L+R D
Sbjct: 130 ---AAGVDRVLLVTGDRD------VLQLVGDGVEVLLTRKGI-----SDLQR-----YDE 170
Query: 167 AYLKNEIARDPDE 179
A ++ E+ P +
Sbjct: 171 ARIREEMGIAPAQ 183
>gi|197287505|ref|YP_002153377.1| 2,4-dienoyl-CoA reductase [Proteus mirabilis HI4320]
gi|227358232|ref|ZP_03842573.1| 2,4-dienoyl-CoA reductase [Proteus mirabilis ATCC 29906]
gi|194684992|emb|CAR47215.1| 2,4-dienoyl-CoA reductase [Proteus mirabilis HI4320]
gi|227161568|gb|EEI46605.1| 2,4-dienoyl-CoA reductase [Proteus mirabilis ATCC 29906]
Length = 672
Score = 35.9 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 8/46 (17%), Positives = 24/46 (52%)
Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQ 159
+ +++ +G + L+ ALQ++ K V ++ ++ + + +Q
Sbjct: 619 DSVILCTGQQSYRPLLQALQQENKTVHLIGGAKEAKALDAKRAIKQ 664
>gi|259486533|tpe|CBF84456.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4]
Length = 262
Score = 35.9 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 34/105 (32%), Gaps = 11/105 (10%)
Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKV 136
+ ++F G K+S D + +DA + S + S D FT L A ++
Sbjct: 62 IQPFQQFAYTNG----KNSTDSAMIIDAMDLLYSNRFGGFCLVSSDSDFTRLAARIRESG 117
Query: 137 KKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
V + + + F+ L P D+
Sbjct: 118 LTVYGFGEQKTPKPFVA-----ACNKFIYTENLSFHGELVPHPDR 157
>gi|21360728|gb|AAM49678.1| phoshoribosylaminoimiazolcarboxylase ATPase subunit [Enterococcus
faecium]
Length = 164
Score = 35.9 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 50/146 (34%), Gaps = 28/146 (19%)
Query: 31 RKLLKA-FRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC 89
+LL+ F ++ A Y T V + D + G+ V K + +
Sbjct: 27 DRLLEKSFLETNNIVIAPYATIVSPTD---------IQDAIDGIGYPCVLKTTRGGYDGK 77
Query: 90 GRKRVKSSMDVELAVDAFEQSEGLEHLVI-----------FSGDGCFT--TLVAALQRKV 136
G+ +KS D+ A+D + + I +G G FT +V + R
Sbjct: 78 GQYVLKSRADLAPAMDLLREGTCVLEAWIPFEKEISIMVAGNGQGDFTTFPVVENIHRNN 137
Query: 137 KKVTIVSTVLSDPSMASDQLRRQADY 162
++ P+ + +A+
Sbjct: 138 ILHETIA-----PAAIDQDVVEEAER 158
>gi|317178554|dbj|BAJ56342.1| hypothetical protein HPF30_0245 [Helicobacter pylori F30]
Length = 213
Score = 35.9 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 11/47 (23%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
+++FS D F ++ A K +V ++ + P++ LR+ D
Sbjct: 125 CILLFSKDTDFVPVLEAAWEKDFEV-FIANIQEGPNLVPPDLRKSCD 170
>gi|167764633|ref|ZP_02436754.1| hypothetical protein BACSTE_03023 [Bacteroides stercoris ATCC
43183]
gi|167697302|gb|EDS13881.1| hypothetical protein BACSTE_03023 [Bacteroides stercoris ATCC
43183]
Length = 234
Score = 35.9 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 12/68 (17%), Positives = 24/68 (35%), Gaps = 7/68 (10%)
Query: 99 DVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
D+ L +DA + + + + DG ++ L ++ KV + L
Sbjct: 80 DIALVIDAMDILRDGRADCFCLVASDGDYSLLAQRIREAGLKV-----LGYGEGKTPVSL 134
Query: 157 RRQADYFM 164
R F+
Sbjct: 135 VRSCSVFL 142
>gi|67904058|ref|XP_682285.1| hypothetical protein AN9016.2 [Aspergillus nidulans FGSC A4]
gi|40745192|gb|EAA64348.1| hypothetical protein AN9016.2 [Aspergillus nidulans FGSC A4]
Length = 404
Score = 35.9 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 34/105 (32%), Gaps = 11/105 (10%)
Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKV 136
+ ++F G K+S D + +DA + S + S D FT L A ++
Sbjct: 204 IQPFQQFAYTNG----KNSTDSAMIIDAMDLLYSNRFGGFCLVSSDSDFTRLAARIRESG 259
Query: 137 KKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
V + + + F+ L P D+
Sbjct: 260 LTVYGFGEQKTPKPFVA-----ACNKFIYTENLSFHGELVPHPDR 299
>gi|307204444|gb|EFN83151.1| Limkain-b1 [Harpegnathos saltator]
Length = 1652
Score = 35.9 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI-A 174
+++ SGD F ++ L+ + K++ ++ L S+ L A+ D L + +
Sbjct: 193 IILISGDINFAADLSDLRHR-KRIHVI---LLHKKNTSEALILCANEHYDFTELMEPLPS 248
Query: 175 RDPDE 179
R P +
Sbjct: 249 RTPAK 253
>gi|57505164|ref|ZP_00371104.1| conserved hypothetical protein [Campylobacter coli RM2228]
gi|57019057|gb|EAL55779.1| conserved hypothetical protein [Campylobacter coli RM2228]
Length = 180
Score = 35.9 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 9/52 (17%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Query: 91 RKRVKS-SMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTI 141
+ K M V L + +E +++ + D F V +++ V +
Sbjct: 96 DIKQKGVDMKVGLDIATLANKHQVEKIILITSDSDFVPAVKHARKEGLIVQL 147
>gi|296131338|ref|YP_003638588.1| hypothetical protein Cfla_3517 [Cellulomonas flavigena DSM 20109]
gi|296023153|gb|ADG76389.1| conserved hypothetical protein [Cellulomonas flavigena DSM 20109]
Length = 163
Score = 35.9 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Query: 96 SSMDVELA--VDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKK 138
DV L VD LV+ SGD F LV ++R +
Sbjct: 83 GGADVALVDDVDLGHLVARFTWLVVASGDHAFVPLVETVRRAGVR 127
>gi|89894266|ref|YP_517753.1| hypothetical protein DSY1520 [Desulfitobacterium hafniense Y51]
gi|219668679|ref|YP_002459114.1| hypothetical protein Dhaf_2652 [Desulfitobacterium hafniense DCB-2]
gi|89333714|dbj|BAE83309.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219538939|gb|ACL20678.1| protein of unknown function DUF88 [Desulfitobacterium hafniense
DCB-2]
Length = 253
Score = 35.9 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 34/172 (19%), Positives = 58/172 (33%), Gaps = 31/172 (18%)
Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRK-LLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
D + IA+ ID N+ S K Y K +L + I Y + Q S
Sbjct: 2 DNDKNIAVLIDADNV--SEK-------YIKPILDEVSNHGIPTYKRIY---GDWTKPQLS 49
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIF 119
+L + + ++++ G+ D L +DA + S+ ++ I
Sbjct: 50 SWKNVL-----LNYSIT--PIQQYSYTTGKNAT----DAALIIDAMDILYSKNVDGFCIV 98
Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
S D FT L A L+ V + + + + F L L
Sbjct: 99 SSDSDFTRLAARLREAGMYVIGMGEKKTPTPFIA-----ACEKFKYLEVLAG 145
>gi|297836172|ref|XP_002885968.1| hypothetical protein ARALYDRAFT_480415 [Arabidopsis lyrata subsp.
lyrata]
gi|297331808|gb|EFH62227.1| hypothetical protein ARALYDRAFT_480415 [Arabidopsis lyrata subsp.
lyrata]
Length = 451
Score = 35.9 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 7/49 (14%)
Query: 99 DVELAVDAFEQSEGLE-----HLVIFSGDGCFTTLVAALQRKVKKVTIV 142
D + +D F L+ +++ SGD F + L ++ V +V
Sbjct: 91 DKAILIDMFLFV--LDNKPPATIILVSGDVDFAPALHILGQRGYTVILV 137
>gi|258508318|ref|YP_003171069.1| dihydrolipoamide dehydrogenase [Lactobacillus rhamnosus GG]
gi|257148245|emb|CAR87218.1| Pyruvate dehydrogenase complex, E3 component,dihydrolipoamide
dehydrogenase [Lactobacillus rhamnosus GG]
gi|259649634|dbj|BAI41796.1| pyruvate dehydrogenase complex E3 component [Lactobacillus
rhamnosus GG]
Length = 467
Score = 35.9 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 25/62 (40%), Gaps = 7/62 (11%)
Query: 110 SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIV------STVLSDPSMASDQLRRQADYF 163
+ L+ +VI SG G + + A +KVT++ L+ + S L +
Sbjct: 7 AIDLDTVVIGSGSGGYVAAIRAA-EMGQKVTVIENTFIGGVCLNVGCIPSKALINAGHRY 65
Query: 164 MD 165
D
Sbjct: 66 QD 67
>gi|294635119|ref|ZP_06713630.1| translation elongation factor Ts [Edwardsiella tarda ATCC 23685]
gi|291091496|gb|EFE24057.1| translation elongation factor Ts [Edwardsiella tarda ATCC 23685]
Length = 285
Score = 35.9 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 27/126 (21%)
Query: 76 QVVAKVAKEFTENCG-------RKRVKSSMDVELAVDAFEQSEG-----------LEHLV 117
++ A + KE E G + V+++ D+ELA+D +S E ++
Sbjct: 3 EITASLVKELRERTGAGMMECKKALVEANGDIELAIDNMRKSGQAKAAKKAGRVAAEGVI 62
Query: 118 I--FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQ--ADYFMDLAYLKNEI 173
+ S DG + +V + V+ + +D++ AD +D+ LK +
Sbjct: 63 LTKVSADGKYGIIVE----MNCETDFVAKDAGFKAF-ADEVANAALADKIIDIDALKAKF 117
Query: 174 ARDPDE 179
+
Sbjct: 118 EEQRTQ 123
>gi|161789278|ref|YP_001595776.1| hypothetical protein BMSF_0033 [Vibrio sp. 09022]
gi|161761499|gb|ABX77143.1| conserved hypothetical protein [Vibrio sp. 09022]
Length = 297
Score = 35.9 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 28/164 (17%), Positives = 53/164 (32%), Gaps = 32/164 (19%)
Query: 9 ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68
A+ +DG N ++ Y+ +L+ + + + Y + D
Sbjct: 8 AVLVDGEN----AQPSK----YQDILREVSQKGNIASKWVYA------DWTNPTHKSWKD 53
Query: 69 WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGCF 125
+ G + ++F K + D L +DA E S+ + + I S DG F
Sbjct: 54 IMLETG----SAPKQQF------HYCKDAADHALIMDAIELICTSDKINAICIVSSDGGF 103
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
L + K V V R+ F+ + +
Sbjct: 104 AGLAQRISEKGLHVMAVG-----KKDTPAAFRKACHNFVYVENI 142
>gi|302801828|ref|XP_002982670.1| hypothetical protein SELMODRAFT_58009 [Selaginella moellendorffii]
gi|300149769|gb|EFJ16423.1| hypothetical protein SELMODRAFT_58009 [Selaginella moellendorffii]
Length = 153
Score = 35.9 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160
+V+ SGD F+ L+ LQ K V +V + S+ L A
Sbjct: 103 VVLISGDQDFSPLLHRLQMKRFNVLLV---RPEGVHVSESLLNSA 144
>gi|224074705|ref|XP_002304433.1| predicted protein [Populus trichocarpa]
gi|222841865|gb|EEE79412.1| predicted protein [Populus trichocarpa]
Length = 300
Score = 35.9 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 23/97 (23%), Positives = 33/97 (34%), Gaps = 15/97 (15%)
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
L D L GF V + K +K M VD + E V+ S D
Sbjct: 113 GLADELKRAGFWVRTVLDKP---QAADVALKDHM-----VDMMD-KRRAECFVLVSDDSD 163
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
F ++ + + K +V V L+R AD
Sbjct: 164 FVHVLKEAKSRCLKTVVVGDVN------DGALKRVAD 194
>gi|190572401|ref|YP_001970246.1| hypothetical protein Smlt0329 [Stenotrophomonas maltophilia K279a]
gi|190010323|emb|CAQ43931.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a]
Length = 253
Score = 35.9 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 6/54 (11%), Positives = 20/54 (37%), Gaps = 2/54 (3%)
Query: 86 TENCGRKRVKSSMDVELAVDA--FEQSEGLEHLVIFSGDGCFTTLVAALQRKVK 137
++ + +D+ + +D + +++ +GD F +R+
Sbjct: 135 PDDLYPNVRQKGVDMRIGIDISSLALKRQVRQIILMAGDADFVPAAKLARREGV 188
>gi|21360744|gb|AAM49686.1| phoshoribosylaminoimiazolcarboxylase ATPase subunit [Enterococcus
faecium]
Length = 164
Score = 35.9 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 24/146 (16%), Positives = 49/146 (33%), Gaps = 28/146 (19%)
Query: 31 RKLLKA-FRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC 89
+LL+ F ++ A Y T V + D + G+ V K + +
Sbjct: 27 DRLLEKSFLETNNIVIAPYATIVSPTD---------IQDAIDGIGYPCVLKTTRGGYDGK 77
Query: 90 GRKRVKSSMDVELAVDAFEQSEGLEHLVI-----------FSGDGCFT--TLVAALQRKV 136
G+ ++S D+ A+D + + I +G G FT +V +
Sbjct: 78 GQYVLESRADLAPAMDLLREGTCVLEAWIPFEKEISIMVAGNGQGDFTTFPVVENIHHNN 137
Query: 137 KKVTIVSTVLSDPSMASDQLRRQADY 162
++ P+ + +A+
Sbjct: 138 ILHETIA-----PAAIDQDVIEEAER 158
>gi|117928955|ref|YP_873506.1| hypothetical protein Acel_1748 [Acidothermus cellulolyticus 11B]
gi|117649418|gb|ABK53520.1| hypothetical protein Acel_1748 [Acidothermus cellulolyticus 11B]
Length = 284
Score = 35.5 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 38/93 (40%), Gaps = 16/93 (17%)
Query: 100 VELAV--DAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQ 155
VELA+ + S ++ +V+ +G+ + +++ K++ + P SD
Sbjct: 90 VELAIYREMLALSRNPEIDTIVLVAGNAELAIPIGDVRQLGKRIIVA-----QPGWDSDD 144
Query: 156 -----LRRQADYFMDLAY--LKNEIARDPDEDK 181
+R AD + L + L + I E +
Sbjct: 145 EDVAAVRDAADETVVLPWPLLADAIELPAAELR 177
>gi|242763909|ref|XP_002340668.1| dynein heavy chain [Talaromyces stipitatus ATCC 10500]
gi|218723864|gb|EED23281.1| dynein heavy chain [Talaromyces stipitatus ATCC 10500]
Length = 4347
Score = 35.5 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 31/81 (38%), Gaps = 12/81 (14%)
Query: 55 DPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAV--DAFEQSEG 112
D EQ +WL N V + +EF + + + +DV L + D E +
Sbjct: 2867 DEEQALKGPILFSNWLSKNYVPVEQEQLREFVKARLKTFCEEEVDVPLVLFNDVLEHALR 2926
Query: 113 LEHL--------VI--FSGDG 123
++ + ++ SG G
Sbjct: 2927 IDRVFRQPQGHLILIGVSGSG 2947
>gi|254374267|ref|ZP_04989749.1| conserved hypothetical protein [Francisella novicida GA99-3548]
gi|151571987|gb|EDN37641.1| conserved hypothetical protein [Francisella novicida GA99-3548]
gi|328676942|gb|AEB27812.1| NG,NG-dimethylarginine dimethylaminohydrolase 1 [Francisella cf.
novicida Fx1]
Length = 260
Score = 35.5 bits (81), Expect = 2.9, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 28/73 (38%), Gaps = 11/73 (15%)
Query: 15 ANLYASSKALGFDIDYRKLLKA--------FRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
NLY + + LG I+ L++ F + A V+R + P ++
Sbjct: 38 QNLYDTYQKLGIKIN---LIEQGDNVPDMVFTANAGVVRENTFIASNFRPAERKPEEVLF 94
Query: 67 LDWLHYNGFQVVA 79
W NG+Q+
Sbjct: 95 QQWFKDNGYQLKT 107
>gi|311742102|ref|ZP_07715912.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272]
gi|311314595|gb|EFQ84502.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272]
Length = 192
Score = 35.5 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 51/147 (34%), Gaps = 29/147 (19%)
Query: 10 LFIDGANLYASSKALGFDI-----------DYRKLLKAFRSR-AIVIRAYYYTTVVGDPE 57
L +DG N+ A+ LG I + +LL+ ++ ++ V
Sbjct: 14 LLVDGENIDAT---LGQSILGRRPHPTERPRWDRLLRFAEEHWDQQVKGLFFLAVTAGEL 70
Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLV 117
+ L GF+ V G K +DV + E + +V
Sbjct: 71 PM-----GFVQALTAIGFRPV--------PLAGAPEQKV-VDVAIQRTLEEIARREADVV 116
Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVST 144
+ S DG F + AL + ++V ++
Sbjct: 117 LASNDGDFLPQIEALVQGSRRVAMLGF 143
>gi|288947791|ref|YP_003445174.1| hypothetical protein Alvin_3251 [Allochromatium vinosum DSM 180]
gi|288898307|gb|ADC64142.1| hypothetical protein Alvin_3251 [Allochromatium vinosum DSM 180]
Length = 328
Score = 35.5 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 27/156 (17%), Positives = 51/156 (32%), Gaps = 21/156 (13%)
Query: 2 FDPREKIALFIDGANLY-ASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
P +AL+IDG N Y A ++ LL + R + +
Sbjct: 69 LQPPRSVALYIDGDNQYPAIARD---------LLASVRQDLGLDVSRVVLAG----NDHG 115
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDV--ELAVDAFEQSEGLEHLVI 118
+ L G + RK + + V EL + +G + +V+
Sbjct: 116 HTVPRWQAALAKEG----LAEDRILALRVPRKPEAADLAVILELGANMERHRQGPDLVVV 171
Query: 119 FSGDGCFTTLVAALQRKVKKVTIV-STVLSDPSMAS 153
S D A++ + +V + + + P+ S
Sbjct: 172 VSRDEWLIGAAEAVRARGCRVWVAYAENDAVPAQTS 207
>gi|217034222|ref|ZP_03439640.1| hypothetical protein HP9810_2g1 [Helicobacter pylori 98-10]
gi|216943282|gb|EEC22744.1| hypothetical protein HP9810_2g1 [Helicobacter pylori 98-10]
Length = 166
Score = 35.5 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 98 MDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQ 155
+D+ LA D + ++ +++FS D F ++ A K +V ++ + P++
Sbjct: 58 IDMLLAHDITKLYCTKQGGCILLFSKDTDFMPVLEAAWEKEFEV-FIANIQEGPNLVPPD 116
Query: 156 LRRQAD 161
LR+ D
Sbjct: 117 LRKSCD 122
>gi|88799413|ref|ZP_01114991.1| hypothetical protein MED297_17443 [Reinekea sp. MED297]
gi|88777952|gb|EAR09149.1| hypothetical protein MED297_17443 [Reinekea sp. MED297]
Length = 252
Score = 35.5 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 31/180 (17%), Positives = 58/180 (32%), Gaps = 35/180 (19%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
+IAL ID N+ + + A Y Q + H
Sbjct: 6 RIALLIDCDNVSH----------------RAVEGVLAVLARY---------GQVNVRHAF 40
Query: 67 LDWLHYN--GFQVVAKV-AKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSG 121
DW + G+ + A + R K++ D + +DA + S ++ + +
Sbjct: 41 GDWNSPHIKGWAEKLQPNAIRPMQQFAYTRQKNATDSAMIIDAMDLLYSGNVDAFALMTS 100
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
D FT LV L+ ++ + + F+ + L D D++K
Sbjct: 101 DCDFTPLVMRLREAG----LMVFGFGEEKTPA-AFVDSCSQFVYIEKLTEASEVDDDDEK 155
>gi|290968037|ref|ZP_06559586.1| conserved hypothetical protein [Megasphaera genomosp. type_1 str.
28L]
gi|290781943|gb|EFD94522.1| conserved hypothetical protein [Megasphaera genomosp. type_1 str.
28L]
Length = 278
Score = 35.5 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 53/165 (32%), Gaps = 29/165 (17%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
K+A+ ID N+ SSK + +L + VI Y Q S +
Sbjct: 6 KLAVVIDAENI--SSKYI------EVILSEANNLGDVIYKRIY--GNWTTPQMASWRTTI 55
Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124
LD A + + K+S D L +D + L+ I S D
Sbjct: 56 LDN------------AIQPVQQYSNTIRKNSSDSALIIDTMDLLYQSNLDGFCIVSSDSD 103
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
FT L + L+ + + S + F+ L L
Sbjct: 104 FTRLASRLRE-----SQKYVLGMGESKTPRSFISACNKFLYLDIL 143
>gi|145223277|ref|YP_001133955.1| beta-ketoacyl synthase [Mycobacterium gilvum PYR-GCK]
gi|145215763|gb|ABP45167.1| beta-ketoacyl synthase [Mycobacterium gilvum PYR-GCK]
Length = 1698
Score = 35.5 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLR 157
SGD V AL+ + V I + + P A DQLR
Sbjct: 1389 SGDNDAVRAVTALEERGVTVHIAAVDIGAPG-ADDQLR 1425
>gi|295101795|emb|CBK99340.1| glutamate synthase (NADH) small subunit [Faecalibacterium
prausnitzii L2-6]
Length = 492
Score = 35.5 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 94 VKSSMDVELAVDAFEQSEGLEHLVIFSG 121
+++MDV AVDA E + +V+ G
Sbjct: 220 FRTNMDVGGAVDAAEILNRYDAIVLCCG 247
>gi|315605855|ref|ZP_07880887.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str.
F0310]
gi|315312553|gb|EFU60638.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str.
F0310]
Length = 190
Score = 35.5 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 32/82 (39%), Gaps = 12/82 (14%)
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVEL--AVDAFEQSEGLEHLVIFSGD 122
+ L + V+ +V +DV L +DA Q + + +++ S D
Sbjct: 70 GFVQALTAMDYSVI------PLSGPADMKV---VDVGLQRTMDAIAQLDSGD-VILASHD 119
Query: 123 GCFTTLVAALQRKVKKVTIVST 144
F + AL + ++V I+
Sbjct: 120 ADFLPQIDALLDQGRRVAIMCF 141
>gi|225619659|ref|YP_002720916.1| hypothetical protein BHWA1_00718 [Brachyspira hyodysenteriae WA1]
gi|225214478|gb|ACN83212.1| hypothetical protein BHWA1_00718 [Brachyspira hyodysenteriae WA1]
Length = 364
Score = 35.5 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 28/162 (17%), Positives = 62/162 (38%), Gaps = 36/162 (22%)
Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
++I ++ID N+ L +++++ ++ S +Y + D E +S
Sbjct: 1 MKRIGIYIDLENVSH----LSYEVNFEQMFNNIFS--------FYKNNLKDKEIVYSIKK 48
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRK-----------RVKSSMDVELAVDAFE---QS 110
D K K++++N + K+ D+ ++DAFE +
Sbjct: 49 AYGDA----------KSIKKYSKNLRDMHIDIVYSVPVNKAKNMADMISSIDAFEDFVIN 98
Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMA 152
+ ++ + S D +T ++ L R V IV+ +
Sbjct: 99 KKIDIAIFVSRDVDYTVVMDRLSRYGAIVGIVTVFDNSKRNI 140
>gi|301312472|ref|ZP_07218386.1| conserved hypothetical protein [Bacteroides sp. 20_3]
gi|300829538|gb|EFK60194.1| conserved hypothetical protein [Bacteroides sp. 20_3]
Length = 234
Score = 35.5 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 12/68 (17%), Positives = 24/68 (35%), Gaps = 7/68 (10%)
Query: 99 DVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
D+ L +DA + + + + DG ++ L ++ KV + L
Sbjct: 80 DIALVIDAMDILRDGRADCFCLVASDGDYSLLAQRIREAGLKV-----LGYGEGKTPVSL 134
Query: 157 RRQADYFM 164
R F+
Sbjct: 135 VRSCSVFL 142
>gi|315443737|ref|YP_004076616.1| polyketide synthase family protein [Mycobacterium sp. Spyr1]
gi|315262040|gb|ADT98781.1| polyketide synthase family protein [Mycobacterium sp. Spyr1]
Length = 1735
Score = 35.5 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLR 157
SGD V AL+ + V I + + P A DQLR
Sbjct: 1426 SGDNDAVRAVTALEERGVTVHIAAVDIGAPG-ADDQLR 1462
>gi|239618081|ref|YP_002941403.1| cysteinyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
gi|239506912|gb|ACR80399.1| cysteinyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
Length = 458
Score = 35.5 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 5/65 (7%)
Query: 49 YTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE 108
Y V + +L Y G++V+ +A+ FT+ + +K++ E VDA E
Sbjct: 33 YNFVHLGNSRPAITFDAFRRYLEYRGYRVI--LAQNFTDIDDKIIIKAN---EEGVDALE 87
Query: 109 QSEGL 113
+E
Sbjct: 88 IAERY 92
>gi|254479226|ref|ZP_05092571.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Carboxydibrachium
pacificum DSM 12653]
gi|214034827|gb|EEB75556.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Carboxydibrachium
pacificum DSM 12653]
Length = 471
Score = 35.5 bits (81), Expect = 3.2, Method: Composition-based stats.
Identities = 33/183 (18%), Positives = 72/183 (39%), Gaps = 33/183 (18%)
Query: 14 GANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYN 73
G N+ + K LG DI++ KLL + R + T+ D + LD + +
Sbjct: 229 GQNVNSYGKDLGGDINFAKLLYMLNDIKGIERIRFMTSHPKDISDELIYAMRDLDKVCEH 288
Query: 74 GF--------QVVAKVAKEFTENCGRK---RVKSSM-DVELAVDAFEQSEGLEHLVIFSG 121
+++ ++ + +T + +V++++ D+ + D +V F G
Sbjct: 289 LHLPVQAGSNKILKRMNRRYTREHYLEIIDKVRANIPDIAITTDI---------IVGFPG 339
Query: 122 DG--CFTT---LVAALQRKVKKVTIVSTVLSDPSM-----ASDQLRRQADYFMDLAYLKN 171
+ F LV ++ + S P+ D++++ D + L L+N
Sbjct: 340 ETEEDFLQTLDLVERVRFDGAYTFMYSKRAGTPAASMPDQVDDEVKK--DRLIRLIELQN 397
Query: 172 EIA 174
+I+
Sbjct: 398 KIS 400
>gi|302407415|ref|XP_003001543.1| cation-transporting ATPase [Verticillium albo-atrum VaMs.102]
gi|261360050|gb|EEY22478.1| cation-transporting ATPase [Verticillium albo-atrum VaMs.102]
Length = 1320
Score = 35.5 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 36/99 (36%), Gaps = 21/99 (21%)
Query: 29 DYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD-----WLHYNGFQVVAKVAK 83
DY + K F R + A Y + + E ++ L L + GF V++ K
Sbjct: 660 DYEETYKYFTRRGSRVLALAYKQLSTEGELSSGKINDLKREQVECGLTFAGFLVLSCPLK 719
Query: 84 EFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
E D + AV +S +V+ +GD
Sbjct: 720 E--------------DAKEAVQMLNESSH--RVVMITGD 742
>gi|302339827|ref|YP_003805033.1| hypothetical protein Spirs_3345 [Spirochaeta smaragdinae DSM 11293]
gi|301637012|gb|ADK82439.1| hypothetical protein Spirs_3345 [Spirochaeta smaragdinae DSM 11293]
Length = 332
Score = 35.5 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 45/137 (32%), Gaps = 17/137 (12%)
Query: 33 LLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRK 92
LL S + A Y + + + LH F+++ ++ +
Sbjct: 27 LLDYVHSYGRISIARVYGDFAKNRFARAAA------ELHRESFEMI-----HIPDSAKEE 75
Query: 93 RVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMA 152
+ ++ L++ SG F L+ L+ + + + V D A
Sbjct: 76 Y--PDTITGGVIALLALHPHIDQLLLISGRKSFAPLLRQLRT----LDLETMVFCDARKA 129
Query: 153 SDQLRRQADYFMDLAYL 169
+QL AD F D L
Sbjct: 130 DEQLLLLADDFGDFRDL 146
>gi|20807803|ref|NP_622974.1| 2-methylthioadenine synthetase [Thermoanaerobacter tengcongensis
MB4]
gi|81481577|sp|Q8RA72|MIAB_THETN RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
gi|20516361|gb|AAM24578.1| 2-methylthioadenine synthetase [Thermoanaerobacter tengcongensis
MB4]
Length = 471
Score = 35.5 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 33/183 (18%), Positives = 72/183 (39%), Gaps = 33/183 (18%)
Query: 14 GANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYN 73
G N+ + K LG DI++ KLL + R + T+ D + LD + +
Sbjct: 229 GQNVNSYGKDLGGDINFAKLLYMLNDIKGIERIRFMTSHPKDISDELIYAMRDLDKVCEH 288
Query: 74 GF--------QVVAKVAKEFTENCGRK---RVKSSM-DVELAVDAFEQSEGLEHLVIFSG 121
+++ ++ + +T + +V++++ D+ + D +V F G
Sbjct: 289 LHLPVQAGSNKILKRMNRRYTREHYLEIIDKVRANIPDIAITTDI---------IVGFPG 339
Query: 122 DG--CF---TTLVAALQRKVKKVTIVSTVLSDPSM-----ASDQLRRQADYFMDLAYLKN 171
+ F LV ++ + S P+ D++++ D + L L+N
Sbjct: 340 ETEEDFFQTLDLVERVRFDGAYTFMYSKRAGTPAASMPDQVDDEVKK--DRLIRLIELQN 397
Query: 172 EIA 174
+I+
Sbjct: 398 KIS 400
>gi|46445921|ref|YP_007286.1| putative cadmium-transporting ATPase [Candidatus Protochlamydia
amoebophila UWE25]
gi|46399562|emb|CAF23011.1| putative cadmium-transporting ATPase [Candidatus Protochlamydia
amoebophila UWE25]
Length = 641
Score = 35.5 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMA--SDQLRRQADYFM-DLAYLK 170
F L+ A Q+K K V VST + D++R + F+ DL L+
Sbjct: 427 DFIDLIDAYQKKGKTVVAVSTHKKVEGIIVLEDEIRSDSAQFIADLKQLQ 476
>gi|298735852|ref|YP_003728377.1| hypothetical protein HPB8_356 [Helicobacter pylori B8]
gi|298355041|emb|CBI65913.1| hypothetical protein HPB8_356 [Helicobacter pylori B8]
Length = 148
Score = 35.5 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 45/104 (43%), Gaps = 10/104 (9%)
Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHL 116
+F ++ D YNG + AK+ + K + +D LA D + ++ +
Sbjct: 9 KFKFVYKFEDKEVYNGLE--AKIFIPYL-----KLRQKQIDALLAHDITKLYCTKQGGCI 61
Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160
++FS D F ++ A K +V ++ + P++ L++
Sbjct: 62 LLFSKDTDFVPVLEAAWEKGFEV-FIANIQEGPNLVPPDLKKSC 104
>gi|170093986|ref|XP_001878214.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646668|gb|EDR10913.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 620
Score = 35.5 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Query: 86 TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTV 145
G+ M V+L + A + +I + D F +A L+ + +V ++S
Sbjct: 76 PSAGGKNIATKMMMVDLIIHALDH-PAPTTFLIITADRDFGYAIATLRLRKYRVVLLSPP 134
Query: 146 LSDPSMASD 154
+ P + S
Sbjct: 135 GTHPDVTSQ 143
>gi|317009114|gb|ADU79694.1| hypothetical protein HPIN_02220 [Helicobacter pylori India7]
Length = 243
Score = 35.5 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 38/96 (39%), Gaps = 6/96 (6%)
Query: 78 VAKVAKEFTENCGRKRV---KSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAAL 132
K+ E G R + +D+ + +D + + ++IFS D +
Sbjct: 127 RTKLHAIRVEFDGSYRALLEQKQVDMLMGLDIQRIAFKKIADRILIFSKDTDLIPALKLA 186
Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
+ + +V ++ + + S+ S L+ +D L+
Sbjct: 187 RDEGLRVD-IADLSNRLSLLSQDLKYNSDKVRKLSS 221
>gi|313159666|gb|EFR59024.1| conserved hypothetical protein [Alistipes sp. HGB5]
Length = 320
Score = 35.5 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 26/166 (15%), Positives = 52/166 (31%), Gaps = 29/166 (17%)
Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
M +K A+ ID N+ I + +L + Y + +F
Sbjct: 1 MELSDKKFAVLIDADNISH------RKI--KDILDEIANYGTPTIKRIY---GDFTDPKF 49
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118
+ +L N +++ G+ D L +DA + E + I
Sbjct: 50 AAWKSILLE---NSIT----PIQQYAYTTGKNAT----DSALIIDAMDILHKESVNGFCI 98
Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
S D +T L + ++ ++V + + D F+
Sbjct: 99 VSSDSDYTRLASRIRESGREVLGFGEKKTPKPF-----IKSCDKFI 139
>gi|229819338|ref|YP_002880864.1| hypothetical protein Bcav_0841 [Beutenbergia cavernae DSM 12333]
gi|229565251|gb|ACQ79102.1| conserved hypothetical protein [Beutenbergia cavernae DSM 12333]
Length = 197
Score = 35.5 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 24/145 (16%), Positives = 46/145 (31%), Gaps = 19/145 (13%)
Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYY-------YTTVVGDPEQQ 59
+ + +DG N+ A+ LG + + R R I A+ T +
Sbjct: 16 RTYVLVDGENIDAT---LGMSVLGHRPAPEERPRWDRITAFAETLWDQPVTALFFLNASN 72
Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119
+ L G+ + G K V D+ + ++ +++
Sbjct: 73 GQMPMSFVQALLALGYHPI-----PLAGGPGEKVV----DIGIQRTLAALTDRPSDVLLA 123
Query: 120 SGDGCFTTLVAALQRKVKKVTIVST 144
S DG F V L +V ++
Sbjct: 124 SHDGDFLPQVEDLLTPDHRVGLLCF 148
>gi|326431491|gb|EGD77061.1| TKL protein kinase [Salpingoeca sp. ATCC 50818]
Length = 1286
Score = 35.5 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 59/155 (38%), Gaps = 24/155 (15%)
Query: 30 YRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC 89
YR+ ++ RS+ + +A ++ + E + L + + ++ ++ +
Sbjct: 903 YRRRVRHLRSQRDLGQA-----LLDEREAEVIALRS-VWQIKFD----QVRLIRRLASGA 952
Query: 90 GRKRVKSSMD-VELAVDAFEQSEGLEHLVIFSGDG---CFTTLVAALQR-KVKKVTIVST 144
K+ D + +AV +Q ++ F DG F V LQR + + V
Sbjct: 953 YGVVFKAEWDSIIVAVKVLKQ-PSVD----FFDDGMEAEFEKEVEFLQRTRHQHVVRFFG 1007
Query: 145 VLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
P + F+ L LK+ + RD +E
Sbjct: 1008 AGQTPENTPFMVL----EFVPLGSLKDLLKRDFEE 1038
>gi|317178375|dbj|BAJ56163.1| hypothetical protein HPF30_0066 [Helicobacter pylori F30]
Length = 230
Score = 35.5 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 7/52 (13%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Query: 87 ENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKV 136
++ + +D+++ +D + + ++ +V+ SGD F + +
Sbjct: 144 DDFIYHAKQKGVDIKIGLDIATLALKKLVQKIVLISGDSDFVPAAKLARVEG 195
>gi|270261265|ref|ZP_06189538.1| isochorismatase hydrolase [Serratia odorifera 4Rx13]
gi|270044749|gb|EFA17840.1| isochorismatase hydrolase [Serratia odorifera 4Rx13]
Length = 248
Score = 35.1 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 41/114 (35%), Gaps = 19/114 (16%)
Query: 2 FDPREKIALFIDGANLYASSKAL----GFDI--------DYRKLLKAFRSRAIVIRAYYY 49
F P+E + +D N YAS GFD+ + ++ + A R+ I + +
Sbjct: 32 FAPQETALIVVDMQNAYASQGGYLDLAGFDVSATAPVIANIKRAISAARAAGIRVIFF-- 89
Query: 50 TTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELA 103
D + + +W N K ++ E G+ K D +L
Sbjct: 90 -QNGWDNQYVEAGGQGSPNWHKSN----ALKTMRKRPELMGKLLAKGDWDYDLV 138
>gi|227505008|ref|ZP_03935057.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940]
gi|227198372|gb|EEI78420.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940]
Length = 92
Score = 35.1 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 7/39 (17%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Query: 100 VELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136
+ + +D +E + +++ SGD F +R
Sbjct: 1 MRIGLDIASLAERGLVNQIIMISGDSDFVPAAKHARRSG 39
>gi|196047975|ref|ZP_03115153.1| C-5 cytosine-specific DNA methylase [Bacillus cereus 03BB108]
gi|196021231|gb|EDX59960.1| C-5 cytosine-specific DNA methylase [Bacillus cereus 03BB108]
Length = 471
Score = 35.1 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 7/31 (22%), Positives = 15/31 (48%)
Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAK 83
DP+++ ++ L NG++V K +
Sbjct: 137 RPDPDKKGKTFKSFINALKRNGYKVDWKELR 167
>gi|311746258|ref|ZP_07720043.1| sigma-54 dependent DNA-binding response regulator [Algoriphagus sp.
PR1]
gi|126576491|gb|EAZ80769.1| sigma-54 dependent DNA-binding response regulator [Algoriphagus sp.
PR1]
Length = 467
Score = 35.1 bits (80), Expect = 3.9, Method: Composition-based stats.
Identities = 14/61 (22%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
LD + ++V ++ + E R+ K + E+ +D + ++L+ SGDG F
Sbjct: 244 FLDEIGNLSYEVQIQLLRAIQE---RRIRKIGGNKEIQIDVRIIAATNDNLIANSGDGQF 300
Query: 126 T 126
Sbjct: 301 R 301
>gi|145631705|ref|ZP_01787467.1| hypothetical protein CGSHi22421_00912 [Haemophilus influenzae
R3021]
gi|144982648|gb|EDJ90190.1| hypothetical protein CGSHi22421_00912 [Haemophilus influenzae
R3021]
Length = 106
Score = 35.1 bits (80), Expect = 4.0, Method: Composition-based stats.
Identities = 7/40 (17%), Positives = 16/40 (40%), Gaps = 4/40 (10%)
Query: 98 MDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVK 137
MD+ + + ++ +V+ +GD F + K
Sbjct: 1 MDITI----LSYEKLVDVIVLIAGDSDFVPAAKQARIKGV 36
>gi|315608482|ref|ZP_07883469.1| conserved hypothetical protein [Prevotella buccae ATCC 33574]
gi|315249808|gb|EFU29810.1| conserved hypothetical protein [Prevotella buccae ATCC 33574]
Length = 239
Score = 35.1 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 56/162 (34%), Gaps = 39/162 (24%)
Query: 9 ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYT-----TVVGDPEQQFSPL 63
A+ IDG N+ ++ LG DI + S I Y + E+ +
Sbjct: 15 AILIDGDNV--AADKLG-DI-----ISFVSSYGNPIIRRIYADWTKSAMKRWKEEAKTFS 66
Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSG 121
L++ L Y G +K++ D+ L +DA + ++ I S
Sbjct: 67 FRLVEALSYVG-------------------MKNTTDMALVIDAMDLLHGKTVQGFCIVSS 107
Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163
D +T L ++ + ++ + + L+ F
Sbjct: 108 DSDYTLLAQRIREEG----LLVLGYGEQKTPA-SLQNSCHEF 144
>gi|256824483|ref|YP_003148443.1| dihydrolipoamide dehydrogenase [Kytococcus sedentarius DSM 20547]
gi|256687876|gb|ACV05678.1| dihydrolipoamide dehydrogenase [Kytococcus sedentarius DSM 20547]
Length = 464
Score = 35.1 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 8/34 (23%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 109 QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIV 142
++ + +V+ +G G + + A Q KKV ++
Sbjct: 1 MADHYDVVVLGAGPGGYVAAIRAAQ-LGKKVAVI 33
>gi|119357877|ref|YP_912521.1| hypothetical protein Cpha266_2085 [Chlorobium phaeobacteroides DSM
266]
gi|119355226|gb|ABL66097.1| conserved hypothetical protein [Chlorobium phaeobacteroides DSM
266]
Length = 249
Score = 35.1 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 16/99 (16%), Positives = 37/99 (37%), Gaps = 7/99 (7%)
Query: 76 QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQ 133
+++ + + + + G + K++ D + +DA + + I S D FT L + ++
Sbjct: 55 EILLEHSIQPIQQFGYTKGKNATDSAMIIDAMDLLYTGKFHGFCIVSSDSDFTKLASRIR 114
Query: 134 RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
V + S D F+ L+ +
Sbjct: 115 ESGLTVYGFGEKKTPSPFVS-----ACDKFIYTEVLRAK 148
>gi|259047876|ref|ZP_05738277.1| conserved hypothetical protein [Granulicatella adiacens ATCC 49175]
gi|259035553|gb|EEW36808.1| conserved hypothetical protein [Granulicatella adiacens ATCC 49175]
Length = 224
Score = 35.1 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 9/53 (16%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Query: 86 TENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKV 136
T+ K +D+ + +D + + + +E +++ +GD F +R+
Sbjct: 138 TDFELNLEQKG-VDMRIGLDIAQLAFKKQVEKIILIAGDSDFVPAAKLARREG 189
>gi|210621068|ref|ZP_03292453.1| hypothetical protein CLOHIR_00396 [Clostridium hiranonis DSM 13275]
gi|210155052|gb|EEA86058.1| hypothetical protein CLOHIR_00396 [Clostridium hiranonis DSM 13275]
Length = 296
Score = 35.1 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 20/113 (17%), Positives = 40/113 (35%), Gaps = 19/113 (16%)
Query: 47 YYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA 106
+ Y G+ ++ S L ++ NG+ V+ + + K +D
Sbjct: 6 FIYNPNSGE-KKLASKLDSIIRIYQRNGYTVI--PYRLDYDIPVSSSFK-DLD------- 54
Query: 107 FEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQ 159
E +H+V GDG +V L+R+ + + PS ++
Sbjct: 55 ----ESYDHVVFCGGDGTIDLMVNELKRRNINLPV----GIIPSGTANDFANA 99
>gi|325854879|ref|ZP_08171631.1| hypothetical protein HMPREF9303_1963 [Prevotella denticola CRIS
18C-A]
gi|325484061|gb|EGC86998.1| hypothetical protein HMPREF9303_1963 [Prevotella denticola CRIS
18C-A]
Length = 239
Score = 35.1 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 33/161 (20%), Positives = 55/161 (34%), Gaps = 35/161 (21%)
Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYY-YT--TVVGDPEQQFSPLH 64
IA+ IDG N+ S+ LG D + + IV R Y +T ++ E+
Sbjct: 14 IAVLIDGDNM--SADKLG---DIISFVSIY-GNPIVRRIYADWTKPAMMRWKEEAKVYSF 67
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGD 122
L++ L Y G + D+ L +DA + ++ I S D
Sbjct: 68 RLVEALSYVGVKNTT-------------------DMTLVIDAMDLLHGKTVQGFCIVSSD 108
Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163
+T L ++ + V + LR F
Sbjct: 109 SDYTLLAQRIREEGLLV-----LGYGEHKTPVALRNSCHDF 144
>gi|294783741|ref|ZP_06749065.1| BchE/P-methylase family protein [Fusobacterium sp. 1_1_41FAA]
gi|294480619|gb|EFG28396.1| BchE/P-methylase family protein [Fusobacterium sp. 1_1_41FAA]
Length = 434
Score = 35.1 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 11/51 (21%), Positives = 22/51 (43%)
Query: 16 NLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
N+ +K +D DY +++ F+ I++ A Y D + F +
Sbjct: 271 NIKKMNKKSNYDFDYENIIRIFKKHRILVHASYVIGYDYDTKDYFQEILDF 321
>gi|156094856|ref|XP_001613464.1| PST-A protein [Plasmodium vivax SaI-1]
gi|148802338|gb|EDL43737.1| PST-A protein [Plasmodium vivax]
Length = 359
Score = 35.1 bits (80), Expect = 4.4, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Query: 51 TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSM---DVELAVDAF 107
++ D + + + ++ L+ +G+ V + ++ G + +K++M D +L D
Sbjct: 77 AILKDADNYYVYKNSWVEQLNKSGYSVYGLDLQGHGQSDGWRNLKTNMKKFD-DLVYDLL 135
Query: 108 EQSEGLEHLVIFSGDGC 124
+ + ++ +G
Sbjct: 136 QYINRVHDVICLTGRKD 152
>gi|301311616|ref|ZP_07217543.1| conserved hypothetical protein [Bacteroides sp. 20_3]
gi|300830702|gb|EFK61345.1| conserved hypothetical protein [Bacteroides sp. 20_3]
Length = 234
Score = 35.1 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 12/68 (17%), Positives = 24/68 (35%), Gaps = 7/68 (10%)
Query: 99 DVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
D+ L +DA + + + + DG ++ L ++ KV + L
Sbjct: 80 DIALVIDAMDILRDGQADCFCLVASDGDYSLLAQRIREAGLKV-----LGYGEGKTPVSL 134
Query: 157 RRQADYFM 164
R F+
Sbjct: 135 VRSCSVFL 142
>gi|320353622|ref|YP_004194961.1| hypothetical protein Despr_1516 [Desulfobulbus propionicus DSM
2032]
gi|320122124|gb|ADW17670.1| hypothetical protein Despr_1516 [Desulfobulbus propionicus DSM
2032]
Length = 356
Score = 35.1 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 12/68 (17%), Positives = 24/68 (35%), Gaps = 7/68 (10%)
Query: 99 DVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
D + +DA + + + S D FT L + ++ + V + + S
Sbjct: 81 DSAMIIDAMDLLYTRRFTGFCLVSSDSDFTRLASRIREEGFPVYGFGERKTPQAFVS--- 137
Query: 157 RRQADYFM 164
D F+
Sbjct: 138 --ACDKFI 143
>gi|332665794|ref|YP_004448582.1| 2,4-dienoyl-CoA reductase (NADPH) [Haliscomenobacter hydrossis DSM
1100]
gi|332334608|gb|AEE51709.1| 2,4-dienoyl-CoA reductase (NADPH) [Haliscomenobacter hydrossis DSM
1100]
Length = 675
Score = 35.1 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 7/50 (14%), Positives = 19/50 (38%)
Query: 113 LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162
++ +++ +G L LQ + V ++ + + + QA
Sbjct: 621 VDQVIVCAGQEPLRELYEPLQSQGVTVHLIGGADEARELDAKRAIDQASR 670
>gi|289582381|ref|YP_003480847.1| AsnC family transcriptional regulator [Natrialba magadii ATCC
43099]
gi|289531934|gb|ADD06285.1| transcriptional regulator, AsnC family [Natrialba magadii ATCC
43099]
Length = 137
Score = 35.1 bits (80), Expect = 4.7, Method: Composition-based stats.
Identities = 16/97 (16%), Positives = 38/97 (39%), Gaps = 14/97 (14%)
Query: 49 YTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA-- 106
YT + + + ++ + N V+ + FT + VK+ +++ +AVD
Sbjct: 20 YTEIADEVGTSEGTVRNRVERMMDN--DVIER----FTISTHTGNVKAMLEISVAVDVDT 73
Query: 107 ------FEQSEGLEHLVIFSGDGCFTTLVAALQRKVK 137
+ E ++ + + SG+ +V A +
Sbjct: 74 KGISERMAEWEEVDFVWMVSGEQDVVLVVDAADTRGV 110
>gi|313235592|emb|CBY11046.1| unnamed protein product [Oikopleura dioica]
Length = 944
Score = 35.1 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 42/115 (36%), Gaps = 18/115 (15%)
Query: 32 KLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL--DWLHYNGFQVVAKVAKEFTENC 89
K LK S+ + I AY D ++ + + + D + + GF ++ KE T
Sbjct: 438 KFLKTLTSQGLRIIAYA----QKDGTEEDAEKNRFVVEDKIKFEGFAILRNDLKEETPGV 493
Query: 90 GRKRVKSSMDVELAV-DAFEQSEGLE----------HLVIFSGD-GCFTTLVAAL 132
+ K+ + + D + + ++ S D F LV ++
Sbjct: 494 LKNLQKAGIRTLMVTGDNLNTAVAVAKKCNLFESRLEVIKPSFDKSDFPHLVESI 548
>gi|118497446|ref|YP_898496.1| hypothetical protein FTN_0854 [Francisella tularensis subsp.
novicida U112]
gi|195536137|ref|ZP_03079144.1| amidinotransferase family protein [Francisella tularensis subsp.
novicida FTE]
gi|208779240|ref|ZP_03246586.1| amidinotransferase family protein [Francisella novicida FTG]
gi|254372807|ref|ZP_04988296.1| conserved hypothetical protein [Francisella tularensis subsp.
novicida GA99-3549]
gi|118423352|gb|ABK89742.1| conserved protein of unknown function [Francisella novicida U112]
gi|151570534|gb|EDN36188.1| conserved hypothetical protein [Francisella novicida GA99-3549]
gi|194372614|gb|EDX27325.1| amidinotransferase family protein [Francisella tularensis subsp.
novicida FTE]
gi|208745040|gb|EDZ91338.1| amidinotransferase family protein [Francisella novicida FTG]
Length = 260
Score = 35.1 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 28/73 (38%), Gaps = 11/73 (15%)
Query: 15 ANLYASSKALGFDIDYRKLLKA--------FRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
NLY + + LG I+ L++ F + A V+R + P ++
Sbjct: 38 QNLYDTYQKLGVKIN---LIEQGENVPDMVFTANAGVVRENTFIASNFRPAERKPEEVLF 94
Query: 67 LDWLHYNGFQVVA 79
W NG+Q+
Sbjct: 95 QQWFKDNGYQLKT 107
>gi|237739286|ref|ZP_04569767.1| radical SAM domain-containing protein [Fusobacterium sp. 2_1_31]
gi|229422894|gb|EEO37941.1| radical SAM domain-containing protein [Fusobacterium sp. 2_1_31]
Length = 434
Score = 35.1 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 11/51 (21%), Positives = 22/51 (43%)
Query: 16 NLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
N+ +K +D DY +++ F+ I++ A Y D + F +
Sbjct: 271 NIKKMNKKSNYDFDYENIIRIFKKHRILVHASYVIGYDYDTKDYFQEILDF 321
>gi|94312282|ref|YP_585492.1| hypothetical protein Rmet_3351 [Cupriavidus metallidurans CH34]
gi|93356134|gb|ABF10223.1| conserved hypothetical protein [Cupriavidus metallidurans CH34]
Length = 253
Score = 35.1 bits (80), Expect = 4.8, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 50/143 (34%), Gaps = 34/143 (23%)
Query: 8 IALFIDGANLYASSKALGFDIDYRK-------LLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
IA+++D N+ ID+ LL I + Y Q
Sbjct: 21 IAVYVDMENV--------ASIDFALEDLMSALLLAEDDHNCIFVIKAAY-------GSQG 65
Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS----EGLEHL 116
+ L + L + F ++ + K+ D+ +++DAFE ++
Sbjct: 66 NAKKALKEQLIDHNFTLI--------DTPKIGVEKNRADLCISLDAFETLYLGNPRIDRY 117
Query: 117 VIFSGDGCFTTLVAALQRKVKKV 139
+ D FT + L++ K+V
Sbjct: 118 CFLTSDSDFTVIGDRLRKYGKEV 140
>gi|282853058|ref|ZP_06262395.1| conserved hypothetical protein [Propionibacterium acnes J139]
gi|282582511|gb|EFB87891.1| conserved hypothetical protein [Propionibacterium acnes J139]
Length = 106
Score = 34.7 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 15/94 (15%), Positives = 30/94 (31%), Gaps = 5/94 (5%)
Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG 112
+P++ L +W V + K + N + +D+ A F+ +
Sbjct: 9 KHNPDEYCRNLAQRSEWTRDRRVTVTYRPLKYY--NPTEPPREKGVDILAAFRIFQAAAY 66
Query: 113 --LEHLVIFSGDGCFTTLVAALQRKV-KKVTIVS 143
+ L++ S D V A + V
Sbjct: 67 READVLILASHDTDLEPAVEAAMKLGTCHVETAG 100
>gi|332669784|ref|YP_004452792.1| hypothetical protein Celf_1270 [Cellulomonas fimi ATCC 484]
gi|332338822|gb|AEE45405.1| hypothetical protein Celf_1270 [Cellulomonas fimi ATCC 484]
Length = 191
Score = 34.7 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 49/148 (33%), Gaps = 30/148 (20%)
Query: 10 LFIDGANLYASSKALGFDI-----------DYRKLLKAFRSR-AIVIRAYYYTTVVGDPE 57
L +DG N+ A+ LG I + ++L + ++A ++
Sbjct: 12 LLVDGENIDAT---LGSSILGGRPTPEQRPRWERVLGFAQQAWGQPVKALFFL-----NA 63
Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLV 117
S + L GF + G K +DV + + ++
Sbjct: 64 SNGSLPMSFVQALLAIGFTPI--------PLSGESYEKV-VDVGIKRTLEAIAARGGDVL 114
Query: 118 IFSGDGCFTTLVAALQRKV-KKVTIVST 144
+ S DG F V L ++V +++
Sbjct: 115 LASHDGDFAPEVETLVDAGDRRVGLLAF 142
>gi|108804536|ref|YP_644473.1| amidase [Rubrobacter xylanophilus DSM 9941]
gi|108765779|gb|ABG04661.1| Amidase [Rubrobacter xylanophilus DSM 9941]
Length = 506
Score = 34.7 bits (79), Expect = 5.1, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 34/88 (38%), Gaps = 22/88 (25%)
Query: 100 VELAVDAF--EQSEGLEHLVIFS---GD------------GCFTTLVAALQRKVKKVTIV 142
+EL +D + + ++ S G+ G + + + ++ +V
Sbjct: 223 IELTLDHVGPIAASVSDVALLLSAIAGEDGLDPRQREVRVGDYQNALER-GVEGVRIGVV 281
Query: 143 STVLSDPSM----ASDQLRRQADYFMDL 166
+ S PS+ + +RR AD F +L
Sbjct: 282 AEGFSLPSLSEEDVDETVRRAADTFREL 309
>gi|308272493|emb|CBX29097.1| hypothetical protein N47_J00780 [uncultured Desulfobacterium sp.]
Length = 251
Score = 34.7 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 17/98 (17%), Positives = 36/98 (36%), Gaps = 7/98 (7%)
Query: 77 VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQR 134
V+ + + + + + K+S D + +DA + + I S D FT L + ++
Sbjct: 54 VLLQYSIQPMQQFAYTKGKNSTDSAMIIDAMDLLYTGNFNGFCIVSSDSDFTKLASRIRE 113
Query: 135 KVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
V + + S D F+ L+ +
Sbjct: 114 SGLLVYGFGEQKTPSAFVS-----ACDKFIYTEVLRAK 146
>gi|25809033|gb|AAN74629.1| hypothetical protein [Gram-negative bacterium 0471]
Length = 306
Score = 34.7 bits (79), Expect = 5.2, Method: Composition-based stats.
Identities = 28/164 (17%), Positives = 53/164 (32%), Gaps = 32/164 (19%)
Query: 9 ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68
A+ +DG N ++ Y+ +L+ + + + Y + D
Sbjct: 8 AVLVDGEN----AQPSK----YQDILREVSQKGNIASKWVYA------DWTNPTHKSWKD 53
Query: 69 WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGDGCF 125
+ G + ++F K + D L +DA E S+ + + I S DG F
Sbjct: 54 IMLETG----SAPKQQF------HYCKDAADHALIMDAIELICTSDKINAICIVSSDGGF 103
Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
L + K V V R+ F+ + +
Sbjct: 104 AGLAQRISEKGLHVMAVG-----KKDTPAAFRKACHNFVYVENI 142
>gi|254779696|ref|YP_003057802.1| hypothetical protein HELPY_1119 [Helicobacter pylori B38]
gi|254001608|emb|CAX29697.1| Conserved hypothetical protein [Helicobacter pylori B38]
Length = 263
Score = 34.7 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Query: 98 MDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQ 155
+DV LA D ++ +++FS D F ++ A K +V ++ + P+
Sbjct: 156 VDVLLAHDITRLYCTKQGGCILLFSRDTDFVPVLEAAWEKGFEV-FIANIQESPNSVPSD 214
Query: 156 LRRQA 160
L++
Sbjct: 215 LKKSC 219
>gi|89900334|ref|YP_522805.1| hypothetical protein Rfer_1542 [Rhodoferax ferrireducens T118]
gi|89345071|gb|ABD69274.1| conserved hypothetical protein [Rhodoferax ferrireducens T118]
Length = 272
Score = 34.7 bits (79), Expect = 5.3, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 21/48 (43%), Gaps = 3/48 (6%)
Query: 93 RVKSSMDVELAVDAFEQSEGLEHL---VIFSGDGCFTTLVAALQRKVK 137
K+ D++L +DA E H+ VI GD F + ++ +
Sbjct: 99 SAKNGADIKLCLDAVEDISRFGHIGTIVIVGGDSDFMPVSQKIKAAGR 146
>gi|256371062|ref|YP_003108886.1| hypothetical protein Afer_0244 [Acidimicrobium ferrooxidans DSM
10331]
gi|256007646|gb|ACU53213.1| conserved hypothetical protein [Acidimicrobium ferrooxidans DSM
10331]
Length = 189
Score = 34.7 bits (79), Expect = 5.4, Method: Composition-based stats.
Identities = 20/112 (17%), Positives = 36/112 (32%), Gaps = 21/112 (18%)
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
P + + +G+ V G +V +D + E +V+ S D
Sbjct: 66 PFIQAIRSHGYTPVLL--------SGPGKV---VDDAIVATLGEIGRRHGSVVLASHDAD 114
Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
F + L +V + + QL + DL L ++ RD
Sbjct: 115 FAPALEQLLDHGHRVALACFT----EYVAGQLLNR----HDLELL--DLERD 156
>gi|158335518|ref|YP_001516690.1| UDP-glucose 6-dehydrogenase [Acaryochloris marina MBIC11017]
gi|158305759|gb|ABW27376.1| UDP-glucose 6-dehydrogenase [Acaryochloris marina MBIC11017]
Length = 459
Score = 34.7 bits (79), Expect = 5.5, Method: Composition-based stats.
Identities = 21/125 (16%), Positives = 43/125 (34%), Gaps = 21/125 (16%)
Query: 13 DGANLYASSKALGFD----------------IDYRKLLKAFR-SRAIVIRAYYYTTVVGD 55
D + L ++ G++ I KL + + + + T
Sbjct: 293 DVSALVHTATDYGYEAILLESTIKVNRHQRVIVIEKLQQTLKILKGKTVGLLGLTFKPDT 352
Query: 56 PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEH 115
+ + +P L+D L+ G +V K G S++ VE D ++ +
Sbjct: 353 DDMRDAPALTLIDELNRLGAKV--KAYDPLLSQSGSSHGLSNVSVE--TDVERLADHCDA 408
Query: 116 LVIFS 120
LV+ +
Sbjct: 409 LVLVT 413
>gi|317178073|dbj|BAJ55862.1| hypothetical protein HPF16_1265 [Helicobacter pylori F16]
Length = 222
Score = 34.7 bits (79), Expect = 5.5, Method: Composition-based stats.
Identities = 7/52 (13%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Query: 87 ENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKV 136
++ + +D+++ +D + + ++ +V+ SGD F + +
Sbjct: 137 DDFIYHAKQKGVDIKIGLDIATLALKKLVQKIVLISGDSDFVPAAKLARVEG 188
>gi|15645498|ref|NP_207673.1| hypothetical protein HP0879 [Helicobacter pylori 26695]
gi|2314014|gb|AAD07927.1| predicted coding region HP0879 [Helicobacter pylori 26695]
Length = 202
Score = 34.7 bits (79), Expect = 5.7, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 38/96 (39%), Gaps = 6/96 (6%)
Query: 78 VAKVAKEFTENCGRKRV---KSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAAL 132
K+ E G R + +D+ + +D + + ++IFS D +
Sbjct: 86 RTKLNAIRVEFDGSYRALLEQKQVDMLMGLDIQRIAFKKIADRILIFSKDTDLIPALKLA 145
Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
+ + +V ++ + + S+ S L+ +D L+
Sbjct: 146 RDEGLRVD-IADLSNRLSLLSQDLKYNSDKVRKLSS 180
>gi|326427441|gb|EGD73011.1| hypothetical protein PTSG_04720 [Salpingoeca sp. ATCC 50818]
Length = 615
Score = 34.7 bits (79), Expect = 5.8, Method: Composition-based stats.
Identities = 10/46 (21%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Query: 91 RKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQR 134
R +++ +DV A + + G++ +V++ GDG F + +
Sbjct: 129 RNLMQAGVDVAFATHMIKVALKPGIDTIVLWCGDGDFFEAMKMCRE 174
>gi|29348060|ref|NP_811563.1| hypothetical protein BT_2650 [Bacteroides thetaiotaomicron
VPI-5482]
gi|29339962|gb|AAO77757.1| conserved hypothetical protein [Bacteroides thetaiotaomicron
VPI-5482]
Length = 233
Score = 34.7 bits (79), Expect = 5.9, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 27/76 (35%), Gaps = 8/76 (10%)
Query: 99 DVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
D+ L +DA + + + + DG +T L ++ V + L
Sbjct: 78 DIALVMDAMDILHEGRVGCFCLVASDGDYTLLAQRIRESGLTV-----LGYGEGKTPAAL 132
Query: 157 RRQADYFMDLAYLKNE 172
R F+ LA K E
Sbjct: 133 VRSCTEFL-LADRKEE 147
>gi|262279291|ref|ZP_06057076.1| 2,4-dienoyl-CoA reductase [Acinetobacter calcoaceticus RUH2202]
gi|262259642|gb|EEY78375.1| 2,4-dienoyl-CoA reductase [Acinetobacter calcoaceticus RUH2202]
Length = 674
Score = 34.7 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 26/60 (43%)
Query: 100 VELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQ 159
+ + +D ++H+VI +G FT + L+ K V ++ + + + RQ
Sbjct: 607 LHITIDGKPSVLEVDHVVICAGQESFTAMYEQLKEDGKNVHLIGGAKEAGELDAKRAIRQ 666
>gi|260436770|ref|ZP_05790740.1| alpha/beta superfamily hydrolase [Synechococcus sp. WH 8109]
gi|260414644|gb|EEX07940.1| alpha/beta superfamily hydrolase [Synechococcus sp. WH 8109]
Length = 242
Score = 34.7 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 22/59 (37%), Gaps = 5/59 (8%)
Query: 11 FIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDW 69
FI G+ L A+ + I YR+LL+ + + + A+ Y Q
Sbjct: 24 FIGGSYLAATPQ-----ISYRRLLEELAADGLTVHAWAYVPGFDHQRQARDAWSAFRSA 77
>gi|257056632|ref|YP_003134464.1| phenylacetate-CoA oxygenase/reductase, PaaK subunit
[Saccharomonospora viridis DSM 43017]
gi|256586504|gb|ACU97637.1| phenylacetate-CoA oxygenase/reductase, PaaK subunit
[Saccharomonospora viridis DSM 43017]
Length = 360
Score = 34.7 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Query: 115 HLVIFSGDG---CFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADYFMDLAYLK 170
H++I +G G + L+ VT++ + M +D+L D ++D L
Sbjct: 121 HVLIAAGSGITPMLSIAATVLRHPATTVTLLYGNRRTDTVMFADELADLKDRYLDRLELV 180
Query: 171 NEIARDPDE 179
+ ++R+P E
Sbjct: 181 HVLSREPRE 189
>gi|317178764|dbj|BAJ56552.1| hypothetical protein HPF30_0455 [Helicobacter pylori F30]
Length = 243
Score = 34.7 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 38/96 (39%), Gaps = 6/96 (6%)
Query: 78 VAKVAKEFTENCGRKRV---KSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAAL 132
K+ E G + + +D+ + +D + + ++IFS D +
Sbjct: 127 RTKLNTIRVEFDGSYKALLEQKQVDMLMGLDIQRIAFKKIADRILIFSKDTDLIPALKLA 186
Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
+ + +V ++ + + S+ S L+ +D L+
Sbjct: 187 RDEGLRVD-IADLSNRLSLLSQDLKYNSDKVRKLSS 221
>gi|294674987|ref|YP_003575603.1| methyl-accepting chemotaxis protein [Prevotella ruminicola 23]
gi|294473914|gb|ADE83303.1| putative methyl-accepting chemotaxis protein [Prevotella ruminicola
23]
Length = 450
Score = 34.7 bits (79), Expect = 6.2, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 106 AFEQSEGLEHLV--IFS-GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162
E + +E V + S D LV+ +Q+K K +T + + SM+ D++R++AD+
Sbjct: 392 MMEPAVAIEQDVQQLCSQSDRDTAQLVSDVQKKGKAIT--ELLKNLISMSDDEMRKEADH 449
>gi|294501087|ref|YP_003564787.1| isopentenyl-diphosphate delta-isomerase [Bacillus megaterium QM
B1551]
gi|294351024|gb|ADE71353.1| isopentenyl-diphosphate delta-isomerase [Bacillus megaterium QM
B1551]
Length = 350
Score = 34.7 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
Query: 103 AVDAFE---QSEGLEHL---VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDP-SMASDQ 155
AVD E L + V+ GD FT + ++R V++VT+ V M++
Sbjct: 135 AVDMLEANGLQIHLNVIQELVMPEGDRDFTDALRRIERIVREVTVPVIVKEVGFGMSAQA 194
Query: 156 LRRQADYFMDLAYL 169
+++ D +++ +
Sbjct: 195 VQKLKDVGVEIVDI 208
>gi|256390750|ref|YP_003112314.1| AsnC family transcriptional regulator [Catenulispora acidiphila DSM
44928]
gi|256356976|gb|ACU70473.1| transcriptional regulator, AsnC family [Catenulispora acidiphila
DSM 44928]
Length = 159
Score = 34.3 bits (78), Expect = 6.5, Method: Composition-based stats.
Identities = 25/152 (16%), Positives = 53/152 (34%), Gaps = 19/152 (12%)
Query: 22 KALGFDIDY--RKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNG---FQ 76
+A G+ +D + +++ + Y T+ + + + L G
Sbjct: 8 RAGGYHLDPLSKAIIEQLQQDGR----RAYATIGRAVGLSEAAVRQRVQKLIDAGVMQIV 63
Query: 77 VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAA----- 131
V +++ D+E DA ++++V+ +G F LV
Sbjct: 64 AVTDPLTVGFHRQAMIGIRAEGDLEPVADALAAMAEVDYVVMTAGS--FDLLVEVVCADD 121
Query: 132 ---LQRKVKKVTIVSTVLSDPSMASDQLRRQA 160
L+ K++ + V S S +LR+Q
Sbjct: 122 DHLLEIINKRIRALPQVRSTESFVYLKLRKQT 153
>gi|317181056|dbj|BAJ58842.1| hypothetical protein HPF32_1260 [Helicobacter pylori F32]
Length = 213
Score = 34.3 bits (78), Expect = 6.5, Method: Composition-based stats.
Identities = 7/52 (13%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Query: 87 ENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKV 136
++ + +D+++ +D + + ++ +V+ SGD F + +
Sbjct: 128 DDFIYHAKQKGVDIKIGLDIATLALKKLVQKIVLISGDSDFVPAAKLARVEG 179
>gi|145606635|ref|XP_001407125.1| hypothetical protein MGG_12005 [Magnaporthe oryzae 70-15]
gi|145014317|gb|EDJ98885.1| hypothetical protein MGG_12005 [Magnaporthe oryzae 70-15]
Length = 1331
Score = 34.3 bits (78), Expect = 6.7, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 36/99 (36%), Gaps = 21/99 (21%)
Query: 29 DYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD-----WLHYNGFQVVAKVAK 83
DY + K F R + A Y + D E + ++ L L + GF V+ K
Sbjct: 663 DYEETYKYFTRRGSRVLALAYKQLTTDSELGAARINDLKRESVESELTFAGFLVLHCPLK 722
Query: 84 EFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
+ D + AV +S +V+ +GD
Sbjct: 723 D--------------DAKQAVQMLNESSH--RVVMITGD 745
>gi|261837896|gb|ACX97662.1| hypothetical protein KHP_0454 [Helicobacter pylori 51]
Length = 243
Score = 34.3 bits (78), Expect = 6.8, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 38/96 (39%), Gaps = 6/96 (6%)
Query: 78 VAKVAKEFTENCGRKRV---KSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAAL 132
K+ E G R + +D+ + +D + + ++IFS D +
Sbjct: 127 RTKLNAIRVEFDGSYRALLEQKQVDMLMGLDIQRIAFKKIADRILIFSKDTDLIPALKLA 186
Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
+ + +V ++ + + S+ S L+ +D L+
Sbjct: 187 RDEGLRVD-IADLSNRLSLLSQDLKYNSDKVRKLSS 221
>gi|15611879|ref|NP_223530.1| hypothetical protein jhp0812 [Helicobacter pylori J99]
gi|108563286|ref|YP_627602.1| hypothetical protein HPAG1_0861 [Helicobacter pylori HPAG1]
gi|254779155|ref|YP_003057260.1| hypothetical protein HELPY_0474 [Helicobacter pylori B38]
gi|308184662|ref|YP_003928795.1| hypothetical protein HPSJM_04455 [Helicobacter pylori SJM180]
gi|4155375|gb|AAD06386.1| putative [Helicobacter pylori J99]
gi|107837059|gb|ABF84928.1| hypothetical protein HPAG1_0861 [Helicobacter pylori HPAG1]
gi|254001066|emb|CAX29013.1| Conserved hypothetical protein [Helicobacter pylori B38]
gi|307637567|gb|ADN80017.1| hypothetical protein hp908_0891 [Helicobacter pylori 908]
gi|308060582|gb|ADO02478.1| hypothetical protein HPSJM_04455 [Helicobacter pylori SJM180]
gi|317014286|gb|ADU81722.1| hypothetical protein HPGAM_04515 [Helicobacter pylori Gambia94/24]
gi|325996158|gb|ADZ51563.1| hypothetical protein hp2018_0861 [Helicobacter pylori 2018]
gi|325997754|gb|ADZ49962.1| hypothetical protein hp2017_0859 [Helicobacter pylori 2017]
Length = 243
Score = 34.3 bits (78), Expect = 6.8, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 38/96 (39%), Gaps = 6/96 (6%)
Query: 78 VAKVAKEFTENCGRKRV---KSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAAL 132
K+ E G R + +D+ + +D + + ++IFS D +
Sbjct: 127 RTKLNAIRVEFDGSYRALLEQKQVDMLMGLDIQRIAFKKIADRILIFSKDTDLIPALKLA 186
Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
+ + +V ++ + + S+ S L+ +D L+
Sbjct: 187 RDEGLRVD-IADLSNRLSLLSQDLKYNSDKVRKLSS 221
>gi|255537067|ref|XP_002509600.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223549499|gb|EEF50987.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 375
Score = 34.3 bits (78), Expect = 6.8, Method: Composition-based stats.
Identities = 21/98 (21%), Positives = 34/98 (34%), Gaps = 17/98 (17%)
Query: 65 PLLDWLHYNGFQVVA-KVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
L D L GF V + + R+ + VD + E LV+ S D
Sbjct: 198 GLADELKRAGFWVTTVSDKPQAADVALREHI---------VDMMD-KRRAECLVLVSDDS 247
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
F ++ + + K +V + L+R AD
Sbjct: 248 DFVGVLKEAKLRCVKTVVVGDIN------DGALKRVAD 279
>gi|257052060|ref|YP_003129893.1| nicotinate phosphoribosyltransferase [Halorhabdus utahensis DSM
12940]
gi|256690823|gb|ACV11160.1| Quinolinate phosphoribosyl transferase [Halorhabdus utahensis DSM
12940]
Length = 388
Score = 34.3 bits (78), Expect = 6.9, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 26/72 (36%), Gaps = 7/72 (9%)
Query: 99 DVELAVDAFEQSEGLEHLVIFSGD---GCFTTLVAALQ----RKVKKVTIVSTVLSDPSM 151
+V+ A+ A E L+ + + + G F +V ++ + +
Sbjct: 217 EVDEAIRAVEAVPDLDSIRLDTTSSRRGDFRRIVQEVRWELDARGHDDVGIFLSGGLDPT 276
Query: 152 ASDQLRRQADYF 163
+LR AD F
Sbjct: 277 TLRELRDVADGF 288
>gi|294778673|ref|ZP_06744093.1| conserved hypothetical protein [Bacteroides vulgatus PC510]
gi|294447485|gb|EFG16065.1| conserved hypothetical protein [Bacteroides vulgatus PC510]
Length = 234
Score = 34.3 bits (78), Expect = 7.1, Method: Composition-based stats.
Identities = 12/68 (17%), Positives = 24/68 (35%), Gaps = 7/68 (10%)
Query: 99 DVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
D+ L +DA + + + + DG ++ L ++ KV + L
Sbjct: 80 DIALVIDAMDILRDGRADCFCLVASDGDYSLLAQRIREAGLKV-----LGYGEDKTPVSL 134
Query: 157 RRQADYFM 164
R F+
Sbjct: 135 VRSCSVFL 142
>gi|208434787|ref|YP_002266453.1| hypothetical protein HPG27_832 [Helicobacter pylori G27]
gi|210135071|ref|YP_002301510.1| hypothetical protein HPP12_0878 [Helicobacter pylori P12]
gi|217033156|ref|ZP_03438614.1| hypothetical protein HPB128_183g3 [Helicobacter pylori B128]
gi|298736585|ref|YP_003729111.1| hypothetical protein HPB8_1090 [Helicobacter pylori B8]
gi|208432716|gb|ACI27587.1| hypothetical protein HPG27_832 [Helicobacter pylori G27]
gi|210133039|gb|ACJ08030.1| hypothetical protein HPP12_0878 [Helicobacter pylori P12]
gi|216945116|gb|EEC23816.1| hypothetical protein HPB128_183g3 [Helicobacter pylori B128]
gi|298355775|emb|CBI66647.1| conserved hypothetical protein [Helicobacter pylori B8]
gi|317012683|gb|ADU83291.1| hypothetical protein HPLT_04445 [Helicobacter pylori Lithuania75]
Length = 241
Score = 34.3 bits (78), Expect = 7.1, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 38/96 (39%), Gaps = 6/96 (6%)
Query: 78 VAKVAKEFTENCGRKRV---KSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAAL 132
K+ E G R + +D+ + +D + + ++IFS D +
Sbjct: 127 RTKLNAIRVEFDGSYRALLEQKQVDMLMGLDIQRIAFKKIADRILIFSKDTDLIPALKLA 186
Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
+ + +V ++ + + S+ S L+ +D L+
Sbjct: 187 RDEGLRVD-IADLSNRLSLLSQDLKYNSDKVRKLSS 221
>gi|207093089|ref|ZP_03240876.1| hypothetical protein HpylHP_09914 [Helicobacter pylori
HPKX_438_AG0C1]
Length = 240
Score = 34.3 bits (78), Expect = 7.1, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 38/96 (39%), Gaps = 6/96 (6%)
Query: 78 VAKVAKEFTENCGRKRV---KSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAAL 132
K+ E G R + +D+ + +D + + ++IFS D +
Sbjct: 126 RTKLNAIRVEFDGSYRALLEQKQVDMLMGLDIQRIAFKKIADRILIFSKDTDLIPALKLA 185
Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
+ + +V ++ + + S+ S L+ +D L+
Sbjct: 186 RDEGLRVD-IADLSNRLSLLSQDLKYNSDKVRKLSS 220
>gi|319441482|ref|ZP_07990638.1| hypothetical protein CvarD4_06921 [Corynebacterium variabile DSM
44702]
Length = 225
Score = 34.3 bits (78), Expect = 7.1, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 43/123 (34%), Gaps = 26/123 (21%)
Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG------LEH 115
+ +D L GF V AK K+S D ++ D + L+
Sbjct: 95 QVRGWVDALRNVGFAVFAKP-------------KTSDDSDVDPDMLDHIRRRHAEGVLDG 141
Query: 116 LVIFSGDG-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
LV+ S DG F L+ L I TVL A + F+DL +
Sbjct: 142 LVVASADGRNFRELLEELAD-----EIPVTVLGFREHAHWAVDNPVLDFVDLEDIDGVF- 195
Query: 175 RDP 177
R+P
Sbjct: 196 REP 198
>gi|78187611|ref|YP_375654.1| folylpolyglutamate synthetase [Chlorobium luteolum DSM 273]
gi|78167513|gb|ABB24611.1| Folylpolyglutamate synthetase [Chlorobium luteolum DSM 273]
Length = 443
Score = 34.3 bits (78), Expect = 7.1, Method: Composition-based stats.
Identities = 21/116 (18%), Positives = 40/116 (34%), Gaps = 8/116 (6%)
Query: 50 TTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELA-VDAFE 108
V D + LD L G++ ++ + + D A VDA
Sbjct: 279 VAVAEDAGVGPEAVREGLDALASTGYRGRLELLGHRPDTFLDVS--HNADGMRATVDALM 336
Query: 109 --QSEGLEHLVIFS--GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160
S + V+F D +++ L R + + + S+ +AS++L
Sbjct: 337 PFLSRYRDARVLFGLVSDKDSESMIRELMRLRCRFA-TTGLPSERGVASEELAEIC 391
>gi|225555359|gb|EEH03651.1| mitochondrial-processing peptidase subunit alpha [Ajellomyces
capsulatus G186AR]
Length = 589
Score = 34.3 bits (78), Expect = 7.2, Method: Composition-based stats.
Identities = 8/37 (21%), Positives = 15/37 (40%)
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160
L +Q ++V + ++ +D LRR A
Sbjct: 501 ELEDLGRQVQAHGRRVGVREMSARIDALTADDLRRVA 537
>gi|157370064|ref|YP_001478053.1| isochorismatase hydrolase [Serratia proteamaculans 568]
gi|317411928|sp|A8GCT5|RUTB_SERP5 RecName: Full=Peroxyureidoacrylate/ureidoacrylate amidohydrolase
RutB; AltName: Full=Ureidoacrylate amidohydrolase
gi|157321828|gb|ABV40925.1| isochorismatase hydrolase [Serratia proteamaculans 568]
Length = 248
Score = 34.3 bits (78), Expect = 7.2, Method: Composition-based stats.
Identities = 27/129 (20%), Positives = 47/129 (36%), Gaps = 22/129 (17%)
Query: 2 FDPREKIALFIDGANLYASSKAL----GFDI--------DYRKLLKAFRSRAIVIRAYYY 49
F P+E + +D N YAS GFDI + ++ + A R+ I + +
Sbjct: 32 FAPQETALIVVDMQNAYASQGGYLDLAGFDISATAPVIANIKRAISAARAAGIKVIFF-- 89
Query: 50 TTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ 109
D + + +W N K ++ E G+ + D +L VD E
Sbjct: 90 -QNGWDNQYVEAGGQGSPNWHKSN----ALKTMRKRPELMGKLLARGDWDYDL-VD--EL 141
Query: 110 SEGLEHLVI 118
+V+
Sbjct: 142 QPQAGDIVL 150
>gi|326317587|ref|YP_004235259.1| dihydrolipoyl dehydrogenase [Acidovorax avenae subsp. avenae ATCC
19860]
gi|323374423|gb|ADX46692.1| Dihydrolipoyl dehydrogenase [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 470
Score = 34.3 bits (78), Expect = 7.2, Method: Composition-based stats.
Identities = 13/62 (20%), Positives = 27/62 (43%), Gaps = 7/62 (11%)
Query: 109 QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIV------STVLSDPSMASDQLRRQADY 162
S+ L+ +++ +G + ++++ ++V IV +T M S L AD
Sbjct: 1 MSDTLDVIILGAGSAGLA-ALREVRKRTERVRIVNDGPWGTTCARVGCMPSKMLIEAADA 59
Query: 163 FM 164
F
Sbjct: 60 FH 61
>gi|51892075|ref|YP_074766.1| hypothetical protein STH937 [Symbiobacterium thermophilum IAM
14863]
gi|51855764|dbj|BAD39922.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM
14863]
Length = 329
Score = 34.3 bits (78), Expect = 7.2, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 38/115 (33%), Gaps = 29/115 (25%)
Query: 21 SKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAK 80
++ LG Y L+ FRSR + AYY + DPE + H + + +
Sbjct: 28 ARMLGR---YAFFLERFRSRYDLAEAYYRRALARDPEDAQTRRH----------YAIFLE 74
Query: 81 VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVA-ALQR 134
+ + + + + + ++ G + + A+Q
Sbjct: 75 TVRGRYDEADAQYRAA----------LRLAPN-DPALL----GDYADFLEHAVQD 114
>gi|325851759|ref|ZP_08170981.1| hypothetical protein HMPREF9303_0793 [Prevotella denticola CRIS
18C-A]
gi|325484715|gb|EGC87625.1| hypothetical protein HMPREF9303_0793 [Prevotella denticola CRIS
18C-A]
Length = 239
Score = 34.3 bits (78), Expect = 7.3, Method: Composition-based stats.
Identities = 28/163 (17%), Positives = 54/163 (33%), Gaps = 39/163 (23%)
Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYT-----TVVGDPEQQFSP 62
IA+ IDG N+ ++ LG DI + S I Y + E+ +
Sbjct: 14 IAILIDGDNV--AADKLG-DI-----ISFVSSYGNPIIRRIYADWTKSAMKRWKEEAKTF 65
Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFS 120
L++ L Y G + D+ L ++A + ++ I S
Sbjct: 66 SFRLVEALSYVGVKNTT-------------------DMALVIEAMDLLHGKTVQGFCIVS 106
Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163
D +T L ++ + ++ + + L+ F
Sbjct: 107 SDSDYTLLAQRIREEG----LLVLGYGEQKTPA-SLQNSCHEF 144
>gi|260186550|ref|ZP_05764024.1| imidazole glycerol phosphate synthase subunit HisH [Mycobacterium
tuberculosis CPHL_A]
gi|289447210|ref|ZP_06436954.1| amidotransferase hisH [Mycobacterium tuberculosis CPHL_A]
gi|289420168|gb|EFD17369.1| amidotransferase hisH [Mycobacterium tuberculosis CPHL_A]
Length = 206
Score = 34.3 bits (78), Expect = 7.4, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
+V+ G G + ALQR +V + T +D +M +D L
Sbjct: 6 VVVLDYGSGNLRSAQRALQRVGAEVEV--TADTDAAMTADGL 45
>gi|150004082|ref|YP_001298826.1| hypothetical protein BVU_1517 [Bacteroides vulgatus ATCC 8482]
gi|154491570|ref|ZP_02031196.1| hypothetical protein PARMER_01181 [Parabacteroides merdae ATCC
43184]
gi|149932506|gb|ABR39204.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
gi|154088371|gb|EDN87416.1| hypothetical protein PARMER_01181 [Parabacteroides merdae ATCC
43184]
Length = 234
Score = 34.3 bits (78), Expect = 7.4, Method: Composition-based stats.
Identities = 12/68 (17%), Positives = 24/68 (35%), Gaps = 7/68 (10%)
Query: 99 DVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
D+ L +DA + + + + DG ++ L ++ KV + L
Sbjct: 80 DIALVIDAMDILRDGRADCFCLVASDGDYSLLAQRIREAGLKV-----LGYGEDKTPVSL 134
Query: 157 RRQADYFM 164
R F+
Sbjct: 135 VRSCSVFL 142
>gi|254303168|ref|ZP_04970526.1| iron-sulfur (Fe-S) dehydrogenase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148323360|gb|EDK88610.1| iron-sulfur (Fe-S) dehydrogenase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 434
Score = 34.3 bits (78), Expect = 7.4, Method: Composition-based stats.
Identities = 11/51 (21%), Positives = 22/51 (43%)
Query: 16 NLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
N+ +K +D DY +++ F+ I++ A Y D + F +
Sbjct: 271 NIKKMNKKSNYDFDYENIIRIFKKYRILVHASYVIGYDYDTKDYFQEILDF 321
>gi|297795213|ref|XP_002865491.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297311326|gb|EFH41750.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 228
Score = 34.3 bits (78), Expect = 7.5, Method: Composition-based stats.
Identities = 8/36 (22%), Positives = 18/36 (50%)
Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151
+++ +GDG + +V L+ + V + + S M
Sbjct: 100 ILLVAGDGDYQDIVDHLRTRGHNVMLAQIIRSSNLM 135
>gi|148242472|ref|YP_001227629.1| glycosyltransferase of family GT20; trehalose-phosphate synthase
[Synechococcus sp. RCC307]
gi|147850782|emb|CAK28276.1| Glycosyltransferase of family GT20; probable trehalose-phosphate
synthase [Synechococcus sp. RCC307]
Length = 488
Score = 34.3 bits (78), Expect = 7.5, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
Query: 132 LQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182
L+ + + V +VST + LR A + L +I RD + +K
Sbjct: 246 LRYQGRTVQLVSTPVGTSPDVIQALRDSA----PVQDLIEDIERDTKKGRK 292
>gi|325115612|emb|CBZ51167.1| putative 4-nitrophenylphosphatase [Neospora caninum Liverpool]
Length = 560
Score = 34.3 bits (78), Expect = 7.7, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 35/115 (30%), Gaps = 31/115 (26%)
Query: 56 PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE-QSEGLE 114
P LD L +G++V+A A D + +
Sbjct: 212 PAAFVDQQQDSLDALTRHGYRVIA---------------------GSASDPLADFVDRYD 250
Query: 115 HL------VIFSGDGCFT---TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160
V+ G F + + AL++K K+V + S L R+A
Sbjct: 251 TFLFDVDGVLVMGGQQFAGAPSALQALRQKGKRVIFFTNGASKSRRTCVALLRKA 305
>gi|145223684|ref|YP_001134362.1| 5'-3' exonuclease [Mycobacterium gilvum PYR-GCK]
gi|145216170|gb|ABP45574.1| 5'-3' exonuclease [Mycobacterium gilvum PYR-GCK]
Length = 321
Score = 34.3 bits (78), Expect = 7.7, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 29/74 (39%), Gaps = 8/74 (10%)
Query: 107 FEQSEGLEHLVIFSGDGCFTTLVA----ALQRKVKKVTIVSTVLSDPSMASDQ----LRR 158
+E + +V+ SGD LV ++ + V P+ +D L R
Sbjct: 136 LAAAEERDPVVVVSGDRDLLQLVRDEPVPVRVLYLGKGLAKAVKWGPAEVADTYGVPLER 195
Query: 159 QADYFMDLAYLKNE 172
+++LA L+ +
Sbjct: 196 AGSAYVELALLRGD 209
>gi|315444011|ref|YP_004076890.1| 5'-3' exonuclease (including N-terminal domain of PolI)
[Mycobacterium sp. Spyr1]
gi|315262314|gb|ADT99055.1| 5'-3' exonuclease (including N-terminal domain of PolI)
[Mycobacterium sp. Spyr1]
Length = 324
Score = 34.3 bits (78), Expect = 7.7, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 29/74 (39%), Gaps = 8/74 (10%)
Query: 107 FEQSEGLEHLVIFSGDGCFTTLVAA----LQRKVKKVTIVSTVLSDPSMASDQ----LRR 158
+E + +V+ SGD LV ++ + V P+ +D L R
Sbjct: 139 LAAAEERDPVVVVSGDRDLLQLVRDEPVPVRVLYLGKGLAKAVKWGPAEVADTYGVPLER 198
Query: 159 QADYFMDLAYLKNE 172
+++LA L+ +
Sbjct: 199 AGSAYVELALLRGD 212
>gi|317182186|dbj|BAJ59970.1| hypothetical protein HPF57_0896 [Helicobacter pylori F57]
Length = 241
Score = 34.3 bits (78), Expect = 7.9, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 38/96 (39%), Gaps = 6/96 (6%)
Query: 78 VAKVAKEFTENCGRKRV---KSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAAL 132
K+ E G R + +D+ + +D + + ++IFS D +
Sbjct: 127 RTKLNAIRVEFDGSYRALLEQKQVDMLMGLDIQRIAFKKIADRILIFSKDTDLIPALKLA 186
Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
+ + +V ++ + + S+ S L+ +D L+
Sbjct: 187 RDEGLRVD-IADLSNRLSLLSQDLKYNSDKVRKLSS 221
>gi|217034486|ref|ZP_03439897.1| hypothetical protein HP9810_873g2 [Helicobacter pylori 98-10]
gi|216943027|gb|EEC22506.1| hypothetical protein HP9810_873g2 [Helicobacter pylori 98-10]
gi|315586456|gb|ADU40837.1| conserved hypothetical protein [Helicobacter pylori 35A]
gi|317177294|dbj|BAJ55083.1| hypothetical protein HPF16_0486 [Helicobacter pylori F16]
gi|317180640|dbj|BAJ58426.1| hypothetical protein HPF32_0844 [Helicobacter pylori F32]
gi|332673318|gb|AEE70135.1| conserved hypothetical protein [Helicobacter pylori 83]
Length = 241
Score = 34.3 bits (78), Expect = 7.9, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 38/96 (39%), Gaps = 6/96 (6%)
Query: 78 VAKVAKEFTENCGRKRV---KSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAAL 132
K+ E G R + +D+ + +D + + ++IFS D +
Sbjct: 127 RTKLNAIRVEFDGSYRALLEQKQVDMLMGLDIQRIAFKKIADRILIFSKDTDLIPALKLA 186
Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
+ + +V ++ + + S+ S L+ +D L+
Sbjct: 187 RDEGLRVD-IADLSNRLSLLSQDLKYNSDKVRKLSS 221
>gi|15608740|ref|NP_216118.1| imidazole glycerol phosphate synthase subunit HisH [Mycobacterium
tuberculosis H37Rv]
gi|148661397|ref|YP_001282920.1| imidazole glycerol phosphate synthase subunit HisH [Mycobacterium
tuberculosis H37Ra]
gi|167970641|ref|ZP_02552918.1| imidazole glycerol phosphate synthase subunit HisH [Mycobacterium
tuberculosis H37Ra]
gi|307084182|ref|ZP_07493295.1| amidotransferase hisH [Mycobacterium tuberculosis SUMu012]
gi|12229824|sp|O06589|HIS5_MYCTU RecName: Full=Imidazole glycerol phosphate synthase subunit hisH;
AltName: Full=IGP synthase glutamine amidotransferase
subunit; AltName: Full=IGP synthase subunit hisH;
AltName: Full=ImGP synthase subunit hisH; Short=IGPS
subunit hisH
gi|2117235|emb|CAB09092.1| Probable amidotransferase hisH [Mycobacterium tuberculosis H37Rv]
gi|148505549|gb|ABQ73358.1| imidazole glycerol phosphate synthase subunit HisH [Mycobacterium
tuberculosis H37Ra]
gi|308366191|gb|EFP55042.1| amidotransferase hisH [Mycobacterium tuberculosis SUMu012]
Length = 206
Score = 34.3 bits (78), Expect = 7.9, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
+V+ G G + ALQR +V + T +D +M +D L
Sbjct: 6 VVVLDYGSGNLRSAQRALQRVGAEVEV--TADTDAAMTADGL 45
>gi|15841055|ref|NP_336092.1| imidazole glycerol phosphate synthase subunit HisH [Mycobacterium
tuberculosis CDC1551]
gi|31792788|ref|NP_855281.1| imidazole glycerol phosphate synthase subunit HisH [Mycobacterium
bovis AF2122/97]
gi|121637509|ref|YP_977732.1| imidazole glycerol phosphate synthase subunit HisH [Mycobacterium
bovis BCG str. Pasteur 1173P2]
gi|148822809|ref|YP_001287563.1| imidazole glycerol phosphate synthase subunit HisH [Mycobacterium
tuberculosis F11]
gi|215404097|ref|ZP_03416278.1| imidazole glycerol phosphate synthase subunit HisH [Mycobacterium
tuberculosis 02_1987]
gi|215411246|ref|ZP_03420054.1| imidazole glycerol phosphate synthase subunit HisH [Mycobacterium
tuberculosis 94_M4241A]
gi|215428079|ref|ZP_03425998.1| imidazole glycerol phosphate synthase subunit HisH [Mycobacterium
tuberculosis T92]
gi|215430493|ref|ZP_03428412.1| imidazole glycerol phosphate synthase subunit HisH [Mycobacterium
tuberculosis EAS054]
gi|215445786|ref|ZP_03432538.1| imidazole glycerol phosphate synthase subunit HisH [Mycobacterium
tuberculosis T85]
gi|218753309|ref|ZP_03532105.1| imidazole glycerol phosphate synthase subunit HisH [Mycobacterium
tuberculosis GM 1503]
gi|219557522|ref|ZP_03536598.1| imidazole glycerol phosphate synthase subunit HisH [Mycobacterium
tuberculosis T17]
gi|224989984|ref|YP_002644671.1| imidazole glycerol phosphate synthase [Mycobacterium bovis BCG str.
Tokyo 172]
gi|253799360|ref|YP_003032361.1| amidotransferase hisH [Mycobacterium tuberculosis KZN 1435]
gi|254231805|ref|ZP_04925132.1| amidotransferase hisH [Mycobacterium tuberculosis C]
gi|254364452|ref|ZP_04980498.1| amidotransferase hisH [Mycobacterium tuberculosis str. Haarlem]
gi|254550605|ref|ZP_05141052.1| imidazole glycerol phosphate synthase subunit HisH [Mycobacterium
tuberculosis '98-R604 INH-RIF-EM']
gi|260200662|ref|ZP_05768153.1| imidazole glycerol phosphate synthase subunit HisH [Mycobacterium
tuberculosis T46]
gi|260204871|ref|ZP_05772362.1| imidazole glycerol phosphate synthase subunit HisH [Mycobacterium
tuberculosis K85]
gi|289443054|ref|ZP_06432798.1| imidazole glycerol phosphate synthase, glutamine amidotransferase
subunit [Mycobacterium tuberculosis T46]
gi|289554624|ref|ZP_06443834.1| amidotransferase hisH [Mycobacterium tuberculosis KZN 605]
gi|289569645|ref|ZP_06449872.1| amidotransferase hisH [Mycobacterium tuberculosis T17]
gi|289574269|ref|ZP_06454496.1| amidotransferase hisH [Mycobacterium tuberculosis K85]
gi|289745961|ref|ZP_06505339.1| imidazole glycerol phosphate synthase subunit hisH [Mycobacterium
tuberculosis 02_1987]
gi|289751302|ref|ZP_06510680.1| amidotransferase hisH [Mycobacterium tuberculosis T92]
gi|289753688|ref|ZP_06513066.1| imidazole glycerol phosphate synthase subunit HisH [Mycobacterium
tuberculosis EAS054]
gi|289757704|ref|ZP_06517082.1| imidazole glycerol phosphate synthase subunit HisH [Mycobacterium
tuberculosis T85]
gi|289761750|ref|ZP_06521128.1| amidotransferase hisH [Mycobacterium tuberculosis GM 1503]
gi|294996552|ref|ZP_06802243.1| imidazole glycerol phosphate synthase subunit HisH [Mycobacterium
tuberculosis 210]
gi|297634155|ref|ZP_06951935.1| imidazole glycerol phosphate synthase subunit HisH [Mycobacterium
tuberculosis KZN 4207]
gi|297731142|ref|ZP_06960260.1| imidazole glycerol phosphate synthase subunit HisH [Mycobacterium
tuberculosis KZN R506]
gi|298525096|ref|ZP_07012505.1| amidotransferase HisH [Mycobacterium tuberculosis 94_M4241A]
gi|306775788|ref|ZP_07414125.1| amidotransferase hisH [Mycobacterium tuberculosis SUMu001]
gi|306779599|ref|ZP_07417936.1| amidotransferase hisH [Mycobacterium tuberculosis SUMu002]
gi|306784332|ref|ZP_07422654.1| amidotransferase hisH [Mycobacterium tuberculosis SUMu003]
gi|306788700|ref|ZP_07427022.1| amidotransferase hisH [Mycobacterium tuberculosis SUMu004]
gi|306793037|ref|ZP_07431339.1| amidotransferase hisH [Mycobacterium tuberculosis SUMu005]
gi|306797418|ref|ZP_07435720.1| amidotransferase hisH [Mycobacterium tuberculosis SUMu006]
gi|306803298|ref|ZP_07439966.1| amidotransferase hisH [Mycobacterium tuberculosis SUMu008]
gi|306807879|ref|ZP_07444547.1| amidotransferase hisH [Mycobacterium tuberculosis SUMu007]
gi|306967696|ref|ZP_07480357.1| amidotransferase hisH [Mycobacterium tuberculosis SUMu009]
gi|306971895|ref|ZP_07484556.1| amidotransferase hisH [Mycobacterium tuberculosis SUMu010]
gi|307079611|ref|ZP_07488781.1| amidotransferase hisH [Mycobacterium tuberculosis SUMu011]
gi|313658474|ref|ZP_07815354.1| imidazole glycerol phosphate synthase subunit HisH [Mycobacterium
tuberculosis KZN V2475]
gi|38257907|sp|P59957|HIS5_MYCBO RecName: Full=Imidazole glycerol phosphate synthase subunit hisH;
AltName: Full=IGP synthase glutamine amidotransferase
subunit; AltName: Full=IGP synthase subunit hisH;
AltName: Full=ImGP synthase subunit hisH; Short=IGPS
subunit hisH
gi|13881267|gb|AAK45906.1| amidotransferase HisH [Mycobacterium tuberculosis CDC1551]
gi|31618378|emb|CAD96296.1| Probable amidotransferase hisH [Mycobacterium bovis AF2122/97]
gi|121493156|emb|CAL71627.1| Probable amidotransferase hisH [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|124600864|gb|EAY59874.1| amidotransferase hisH [Mycobacterium tuberculosis C]
gi|134149966|gb|EBA42011.1| amidotransferase hisH [Mycobacterium tuberculosis str. Haarlem]
gi|148721336|gb|ABR05961.1| amidotransferase hisH [Mycobacterium tuberculosis F11]
gi|224773097|dbj|BAH25903.1| imidazole glycerol phosphate synthase [Mycobacterium bovis BCG str.
Tokyo 172]
gi|253320863|gb|ACT25466.1| amidotransferase hisH [Mycobacterium tuberculosis KZN 1435]
gi|289415973|gb|EFD13213.1| imidazole glycerol phosphate synthase, glutamine amidotransferase
subunit [Mycobacterium tuberculosis T46]
gi|289439256|gb|EFD21749.1| amidotransferase hisH [Mycobacterium tuberculosis KZN 605]
gi|289538700|gb|EFD43278.1| amidotransferase hisH [Mycobacterium tuberculosis K85]
gi|289543399|gb|EFD47047.1| amidotransferase hisH [Mycobacterium tuberculosis T17]
gi|289686489|gb|EFD53977.1| imidazole glycerol phosphate synthase subunit hisH [Mycobacterium
tuberculosis 02_1987]
gi|289691889|gb|EFD59318.1| amidotransferase hisH [Mycobacterium tuberculosis T92]
gi|289694275|gb|EFD61704.1| imidazole glycerol phosphate synthase subunit HisH [Mycobacterium
tuberculosis EAS054]
gi|289709256|gb|EFD73272.1| amidotransferase hisH [Mycobacterium tuberculosis GM 1503]
gi|289713268|gb|EFD77280.1| imidazole glycerol phosphate synthase subunit HisH [Mycobacterium
tuberculosis T85]
gi|298494890|gb|EFI30184.1| amidotransferase HisH [Mycobacterium tuberculosis 94_M4241A]
gi|308215703|gb|EFO75102.1| amidotransferase hisH [Mycobacterium tuberculosis SUMu001]
gi|308327454|gb|EFP16305.1| amidotransferase hisH [Mycobacterium tuberculosis SUMu002]
gi|308330880|gb|EFP19731.1| amidotransferase hisH [Mycobacterium tuberculosis SUMu003]
gi|308334715|gb|EFP23566.1| amidotransferase hisH [Mycobacterium tuberculosis SUMu004]
gi|308338492|gb|EFP27343.1| amidotransferase hisH [Mycobacterium tuberculosis SUMu005]
gi|308342225|gb|EFP31076.1| amidotransferase hisH [Mycobacterium tuberculosis SUMu006]
gi|308345689|gb|EFP34540.1| amidotransferase hisH [Mycobacterium tuberculosis SUMu007]
gi|308349989|gb|EFP38840.1| amidotransferase hisH [Mycobacterium tuberculosis SUMu008]
gi|308354626|gb|EFP43477.1| amidotransferase hisH [Mycobacterium tuberculosis SUMu009]
gi|308358582|gb|EFP47433.1| amidotransferase hisH [Mycobacterium tuberculosis SUMu010]
gi|308362508|gb|EFP51359.1| amidotransferase hisH [Mycobacterium tuberculosis SUMu011]
gi|323719861|gb|EGB28974.1| amidotransferase hisH [Mycobacterium tuberculosis CDC1551A]
gi|326903215|gb|EGE50148.1| amidotransferase hisH [Mycobacterium tuberculosis W-148]
gi|328459110|gb|AEB04533.1| amidotransferase hisH [Mycobacterium tuberculosis KZN 4207]
Length = 206
Score = 34.3 bits (78), Expect = 7.9, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
+V+ G G + ALQR +V + T +D +M +D L
Sbjct: 6 VVVLDYGSGNLRSAQRALQRVGAEVEV--TADTDAAMTADGL 45
>gi|317014531|gb|ADU81967.1| hypothetical protein HPGAM_05910 [Helicobacter pylori Gambia94/24]
Length = 238
Score = 34.3 bits (78), Expect = 7.9, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Query: 98 MDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQ 155
+D LA D + ++ L +V+FS D F ++ A K +V ++ + P+
Sbjct: 174 VDALLAHDITKLYCTKPLGCVVLFSKDTDFVPVLEAAWEKGFEV-FIANIQESPNFVPSD 232
Query: 156 LRRQA 160
L+ A
Sbjct: 233 LKSLA 237
>gi|154286908|ref|XP_001544249.1| mitochondrial processing peptidase alpha subunit [Ajellomyces
capsulatus NAm1]
gi|150407890|gb|EDN03431.1| mitochondrial processing peptidase alpha subunit [Ajellomyces
capsulatus NAm1]
Length = 226
Score = 34.3 bits (78), Expect = 8.0, Method: Composition-based stats.
Identities = 8/37 (21%), Positives = 15/37 (40%)
Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160
L +Q ++V + ++ +D LRR A
Sbjct: 138 ELEDLGRQVQAHGRRVGVREMSARIDALTADDLRRVA 174
>gi|16332015|ref|NP_442743.1| ExsB protein [Synechocystis sp. PCC 6803]
gi|1001327|dbj|BAA10814.1| ExsB protein [Synechocystis sp. PCC 6803]
Length = 271
Score = 34.3 bits (78), Expect = 8.0, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
+V+ SG T+ A +R+ +V +S +LR AD
Sbjct: 45 VVLLSGGLDSATVAAIAKREGYRVIALSFNYGQRH--DRELRAAAD 88
>gi|15678199|ref|NP_275314.1| glucosamine--fructose-6-phosphate aminotransferase
[Methanothermobacter thermautotrophicus str. Delta H]
gi|6225451|sp|O26273|GLMS_METTH RecName: Full=Glucosamine--fructose-6-phosphate aminotransferase
[isomerizing]; AltName: Full=D-fructose-6-phosphate
amidotransferase; AltName: Full=GFAT; AltName:
Full=Glucosamine-6-phosphate synthase; AltName:
Full=Hexosephosphate aminotransferase; AltName:
Full=L-glutamine-D-fructose-6-phosphate amidotransferase
gi|2621214|gb|AAB84677.1| glutamine-fructose-6-phosphate transaminase [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 590
Score = 34.3 bits (78), Expect = 8.1, Method: Composition-based stats.
Identities = 9/39 (23%), Positives = 20/39 (51%), Gaps = 6/39 (15%)
Query: 129 VAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
V ++ + +V + S++ + LR++AD F+ L
Sbjct: 514 VEEVRARGARV------IGVGSISDESLRKEADDFIGLD 546
>gi|293190370|ref|ZP_06608802.1| conserved hypothetical protein [Actinomyces odontolyticus F0309]
gi|292820954|gb|EFF79909.1| conserved hypothetical protein [Actinomyces odontolyticus F0309]
Length = 190
Score = 34.3 bits (78), Expect = 8.2, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 29/82 (35%), Gaps = 12/82 (14%)
Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVEL--AVDAFEQSEGLEHLVIFSGD 122
+ L + V+ +V +DV L +DA + +++ S D
Sbjct: 70 GFVQALTAMDYSVI------PLSGPADMKV---VDVGLQRTMDAIANLGSGD-VILASHD 119
Query: 123 GCFTTLVAALQRKVKKVTIVST 144
F + L + ++V ++
Sbjct: 120 ADFLPQIETLLDQGRRVAVMCF 141
>gi|290968815|ref|ZP_06560352.1| 6-phosphogluconate dehydrogenase, decarboxylating [Megasphaera
genomosp. type_1 str. 28L]
gi|290781111|gb|EFD93702.1| 6-phosphogluconate dehydrogenase, decarboxylating [Megasphaera
genomosp. type_1 str. 28L]
Length = 469
Score = 33.9 bits (77), Expect = 8.4, Method: Composition-based stats.
Identities = 13/52 (25%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Query: 20 SSKALGFDIDYRKLLKAFRSRAIVIRAYYY----TTVVGDPEQQFSPLHPLL 67
+S+ G+ +DYR++ + FR+ +I+A + T D + + HP
Sbjct: 340 ASQTYGWQLDYRRIAEIFRAGC-IIQAKFLDTISTAYAEDAQVENLLFHPFF 390
>gi|222619216|gb|EEE55348.1| hypothetical protein OsJ_03373 [Oryza sativa Japonica Group]
Length = 327
Score = 33.9 bits (77), Expect = 8.5, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 110 SEGLEHLVIFSGDGCFTTLVA--ALQRKVKKVTIVSTVLSDPS 150
L+ L++FS DG F L L+RK + V+ ++ P
Sbjct: 215 MHHLDFLLLFSMDGDFAPLPELVKLRRKHMEHLFVARMVVVPP 257
>gi|169611408|ref|XP_001799122.1| hypothetical protein SNOG_08816 [Phaeosphaeria nodorum SN15]
gi|111062864|gb|EAT83984.1| hypothetical protein SNOG_08816 [Phaeosphaeria nodorum SN15]
Length = 277
Score = 33.9 bits (77), Expect = 8.5, Method: Composition-based stats.
Identities = 15/102 (14%), Positives = 33/102 (32%), Gaps = 7/102 (6%)
Query: 81 VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVT 140
++F G+ +M ++ A+D + I S D FT L + ++ + V
Sbjct: 62 PIQQFAYTSGKNATDGAMIID-AMDLL-YTGRYTAFCIVSSDSDFTRLASRIREQAVTVY 119
Query: 141 IVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182
+ + + + F L D++
Sbjct: 120 GFGERKTPHAFVA-----ACNKFTYFDVLNMTFEEPATADRQ 156
>gi|300919736|ref|ZP_07136220.1| helix-turn-helix protein [Escherichia coli MS 115-1]
gi|300413196|gb|EFJ96506.1| helix-turn-helix protein [Escherichia coli MS 115-1]
Length = 195
Score = 33.9 bits (77), Expect = 8.7, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 46/126 (36%), Gaps = 17/126 (13%)
Query: 34 LKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKR 93
L S+ ++ Y V D + + + + G+ + AK FT+
Sbjct: 3 LTFKTSKGNIMAILGYCRVSTDDQSITNQQMQIEEA----GYNI----AKWFTDEAVSGS 54
Query: 94 VKSSMDVELAVDAFEQSEGLEHLVIFSGDG------CFTTLVAALQRKVKKVTIVSTVLS 147
VK+S+ + + + +V+ + D + V ALQ K VT++S
Sbjct: 55 VKASLRNGFSS-LLAYAREGDTVVVVAVDRLGRDTIDVLSTVKALQAKG--VTVISLREG 111
Query: 148 DPSMAS 153
++
Sbjct: 112 FDLSSA 117
>gi|15645947|ref|NP_208126.1| hypothetical protein HP1334 [Helicobacter pylori 26695]
gi|2314514|gb|AAD08389.1| predicted coding region HP1334 [Helicobacter pylori 26695]
Length = 224
Score = 33.9 bits (77), Expect = 8.8, Method: Composition-based stats.
Identities = 7/52 (13%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Query: 87 ENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKV 136
++ + +D+++ +D + + ++ +V+ SGD F + +
Sbjct: 140 DDFIYHAKQKGVDIKIGLDIATLALKKLVQKIVLISGDSDFVPASKLARVEG 191
>gi|188528123|ref|YP_001910810.1| hypothetical protein HPSH_06900 [Helicobacter pylori Shi470]
gi|188144363|gb|ACD48780.1| hypothetical protein HPSH_06900 [Helicobacter pylori Shi470]
Length = 121
Score = 33.9 bits (77), Expect = 8.8, Method: Composition-based stats.
Identities = 7/52 (13%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Query: 87 ENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKV 136
++ + +D+++ +D + + ++ +V+ SGD F + +
Sbjct: 35 DDFIYHAKQKGVDIKIGLDIATLALKKLVQKIVLISGDSDFVPAAKLARVEG 86
>gi|239814200|ref|YP_002943110.1| polysaccharide pyruvyl transferase [Variovorax paradoxus S110]
gi|239800777|gb|ACS17844.1| putative polysaccharide pyruvyl transferase [Variovorax paradoxus
S110]
Length = 387
Score = 33.9 bits (77), Expect = 9.0, Method: Composition-based stats.
Identities = 24/119 (20%), Positives = 41/119 (34%), Gaps = 22/119 (18%)
Query: 33 LLKAFRSRAIVIRAY--YYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCG 90
L F + A +Y T ++ S LH + + QVV A +
Sbjct: 149 FLGRFLVGRFLKNARPAFYATR---DQESASNLHNYFR-IPRSDIQVVPDPALICADAFS 204
Query: 91 RK-RVKSSMDVELAV---DAFEQSEGLEHLVIFSGDGC------FTTLVAALQRKVKKV 139
+ + + D+ + V DA + E G F TL +L+ + K+V
Sbjct: 205 DELSPEKNWDIGICVSSLDALVMNSEYE------GSNSTPSAKFFATLAESLRAEGKRV 257
>gi|154483449|ref|ZP_02025897.1| hypothetical protein EUBVEN_01152 [Eubacterium ventriosum ATCC
27560]
gi|149735701|gb|EDM51587.1| hypothetical protein EUBVEN_01152 [Eubacterium ventriosum ATCC
27560]
Length = 222
Score = 33.9 bits (77), Expect = 9.0, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
+ VIF+GD F + L+ KKV I S S++L+ A+ ++++
Sbjct: 80 DVFVIFTGDAHFNLAIKYLRELKKKVIIYGVKRSL----SNKLKSSANSYVEM 128
>gi|304312940|ref|YP_003812538.1| Predicted AD-superfamily hydrolase subfamily IA [gamma
proteobacterium HdN1]
gi|301798673|emb|CBL46905.1| Predicted AD-superfamily hydrolase subfamily IA [gamma
proteobacterium HdN1]
Length = 215
Score = 33.9 bits (77), Expect = 9.1, Method: Composition-based stats.
Identities = 33/165 (20%), Positives = 58/165 (35%), Gaps = 28/165 (16%)
Query: 30 YRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQ--VVAKVAKEFTE 87
Y +L + + A++Y DP Q F+ + L+D L V ++ +
Sbjct: 58 YPELSEQDVQQVRERYAHFYVAHQQDPTQFFAGIPALMDDLRRKSCTLGVATGKSRRGLD 117
Query: 88 ------------------NCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLV 129
+ + + + M +EL +DAF EH V+ GD F +
Sbjct: 118 RVMQTLDAESWFAATRCADETKGKPEPDMVLEL-LDAFSVRP--EHAVVV-GDSHFD--I 171
Query: 130 AALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
QR V ++ ++S Q DLA L+ +
Sbjct: 172 EMAQRAG--VHGIAVGWGAQPLSSFAHSPQVTTVNDLAALRRALG 214
>gi|110816273|sp|Q55468|QUEC_SYNY3 RecName: Full=7-cyano-7-deazaguanine synthase; AltName:
Full=7-cyano-7-carbaguanine synthase; AltName:
Full=PreQ(0) synthase; AltName: Full=Queuosine
biosynthesis protein queC
Length = 232
Score = 33.9 bits (77), Expect = 9.1, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
+V+ SG T+ A +R+ +V +S +LR AD
Sbjct: 6 VVLLSGGLDSATVAAIAKREGYRVIALSFNYGQRH--DRELRAAAD 49
>gi|332974390|gb|EGK11317.1| hypothetical protein HMPREF0476_0432 [Kingella kingae ATCC 23330]
Length = 162
Score = 33.9 bits (77), Expect = 9.3, Method: Composition-based stats.
Identities = 10/84 (11%), Positives = 31/84 (36%), Gaps = 10/84 (11%)
Query: 86 TENCGRKRVKSSMDVELAVDAFEQS----EGLEHLVIFSGDGCFTTLVAALQRKVKKVTI 141
+ K +D+++ +D + G + V+ + D F + + + ++ +
Sbjct: 79 ADIAPNITQKG-VDMKIGLDMATLALKKASGRD-FVLVTADSDFVPAIKLARMEGVQIFL 136
Query: 142 VSTVLSDPSMASDQLRRQADYFMD 165
+ +L+ +D +D
Sbjct: 137 AHLGHTVKP----ELKEHSDVLLD 156
>gi|308183032|ref|YP_003927159.1| hypothetical protein HPPC_04435 [Helicobacter pylori PeCan4]
gi|308065217|gb|ADO07109.1| hypothetical protein HPPC_04435 [Helicobacter pylori PeCan4]
Length = 241
Score = 33.9 bits (77), Expect = 9.3, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 38/96 (39%), Gaps = 6/96 (6%)
Query: 78 VAKVAKEFTENCGRKRV---KSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAAL 132
K+ E G + + +D+ + +D + + ++IFS D +
Sbjct: 127 RTKLNAIRVEFDGSYKALLEQKQVDMLMGLDIQRIAFKKIADRILIFSKDTDLIPALKLA 186
Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
+ + +V ++ + + S+ S L+ +D L+
Sbjct: 187 RDEGLRVD-IADLSNRLSLLSQDLKYNSDKVRKLSS 221
>gi|295706434|ref|YP_003599509.1| isopentenyl-diphosphate delta-isomerase [Bacillus megaterium DSM
319]
gi|294804093|gb|ADF41159.1| isopentenyl-diphosphate delta-isomerase [Bacillus megaterium DSM
319]
Length = 350
Score = 33.9 bits (77), Expect = 9.4, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
Query: 103 AVDAFE---QSEGLEHL---VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDP-SMASDQ 155
AVD E L + V+ GD FT + ++R +++VT+ V M++
Sbjct: 135 AVDMLEANGLQIHLNVIQELVMPEGDRDFTDALRRIERIIREVTVPVIVKEVGFGMSAQA 194
Query: 156 LRRQADYFMDLAYL 169
+++ D +++ +
Sbjct: 195 VQKLKDVGVEIVDI 208
>gi|255318504|ref|ZP_05359737.1| diguanylate cyclase [Acinetobacter radioresistens SK82]
gi|262378732|ref|ZP_06071889.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
gi|255304496|gb|EET83680.1| diguanylate cyclase [Acinetobacter radioresistens SK82]
gi|262300017|gb|EEY87929.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
Length = 519
Score = 33.9 bits (77), Expect = 9.5, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 48/123 (39%), Gaps = 13/123 (10%)
Query: 3 DPREKIALFIDGA--NLY----ASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP 56
+ KIA+ ID N+ S+K LG D ++ + R + YY + VV D
Sbjct: 51 EHANKIAIIIDNHFKNILIELGYSAKILGKKFDDNEIRETEVQRLKMQSDYYNSVVVSDS 110
Query: 57 EQQFSPLHPLLDWLHYN------GFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110
E + P + + N G K K + + VK +M V ++ F++
Sbjct: 111 EGRLINYSPNILNIDKNKVQTTLGISNSIKEKKPYI-SSPYLSVKKNMIVFISYPIFDEK 169
Query: 111 EGL 113
+
Sbjct: 170 KRY 172
>gi|297380079|gb|ADI34966.1| Hypothetical protein HPV225_0900 [Helicobacter pylori v225d]
gi|308062202|gb|ADO04090.1| hypothetical protein HPCU_04660 [Helicobacter pylori Cuz20]
Length = 243
Score = 33.9 bits (77), Expect = 9.6, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 38/96 (39%), Gaps = 6/96 (6%)
Query: 78 VAKVAKEFTENCGRKRV---KSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAAL 132
K+ E G + + +D+ + +D + + ++IFS D +
Sbjct: 127 RTKLNAIRVEFDGSYKALLEQKQVDMLMGLDIQRIAFKKIADRILIFSKDTDLIPALKLA 186
Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
+ + +V ++ + + S+ S L+ +D L+
Sbjct: 187 RDEGLRVD-IADLSNRLSLLSQDLKYNSDKVRKLSS 221
>gi|208435230|ref|YP_002266896.1| hypothetical protein HPG27_1282 [Helicobacter pylori G27]
gi|208433159|gb|ACI28030.1| hypothetical protein HPG27_1282 [Helicobacter pylori G27]
Length = 220
Score = 33.9 bits (77), Expect = 9.8, Method: Composition-based stats.
Identities = 7/52 (13%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Query: 87 ENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKV 136
++ + +D+++ +D + + ++ +V+ SGD F + +
Sbjct: 136 DDFIYHAKQKGVDIKIGLDIATLALKKLVQKIVLISGDSDFVPASKLARVEG 187
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.314 0.167 0.510
Lambda K H
0.267 0.0513 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,013,452,771
Number of Sequences: 14124377
Number of extensions: 183115251
Number of successful extensions: 528362
Number of sequences better than 10.0: 1672
Number of HSP's better than 10.0 without gapping: 1170
Number of HSP's successfully gapped in prelim test: 1064
Number of HSP's that attempted gapping in prelim test: 524533
Number of HSP's gapped (non-prelim): 2443
length of query: 182
length of database: 4,842,793,630
effective HSP length: 130
effective length of query: 52
effective length of database: 3,006,624,620
effective search space: 156344480240
effective search space used: 156344480240
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.1 bits)
S2: 77 (33.9 bits)