BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780936|ref|YP_003065349.1| hypothetical protein CLIBASIA_04175 [Candidatus Liberibacter asiaticus str. psy62] (182 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done >gi|254477746|ref|ZP_05091132.1| DUF88 [Ruegeria sp. R11] gi|214031989|gb|EEB72824.1| DUF88 [Ruegeria sp. R11] Length = 189 Score = 211 bits (536), Expect = 4e-53, Method: Composition-based stats. Identities = 96/182 (52%), Positives = 137/182 (75%), Gaps = 2/182 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + ++ Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLEN--DEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F LV +LQR+ +V++VST+ S P M SD+LRRQAD F++L LK+ I R P E Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELEELKDVIGRPPREQ 178 Query: 181 KK 182 + Sbjct: 179 GE 180 >gi|163738230|ref|ZP_02145646.1| hypothetical protein RGBS107_07449 [Phaeobacter gallaeciensis BS107] gi|163740168|ref|ZP_02147562.1| hypothetical protein RG210_08712 [Phaeobacter gallaeciensis 2.10] gi|161386026|gb|EDQ10401.1| hypothetical protein RG210_08712 [Phaeobacter gallaeciensis 2.10] gi|161388846|gb|EDQ13199.1| hypothetical protein RGBS107_07449 [Phaeobacter gallaeciensis BS107] Length = 189 Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats. Identities = 96/180 (53%), Positives = 137/180 (76%), Gaps = 2/180 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + ++ Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLEN--DEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F L+A+LQR+ +V++VST+ S P M SD+LRRQAD F++L LK+ I R P E Sbjct: 119 GDGDFRPLIASLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELEELKDVIGRPPREQ 178 >gi|99082408|ref|YP_614562.1| hypothetical protein TM1040_2568 [Ruegeria sp. TM1040] gi|99038688|gb|ABF65300.1| protein of unknown function DUF88 [Ruegeria sp. TM1040] Length = 189 Score = 208 bits (529), Expect = 3e-52, Method: Composition-based stats. Identities = 96/179 (53%), Positives = 137/179 (76%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYAS+KALGFDIDY+ L + F R ++RA+YYT ++ + ++ Sbjct: 1 MFYKDERLALFIDGSNLYASAKALGFDIDYKLLRQEFMRRGKLVRAFYYTALLEN--DEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFSMVTKPAKEYTDSMGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F L+A+LQR+ +V++VST+ S P M SD+LRRQAD F++L L++ I R P E Sbjct: 119 GDGDFRPLIASLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELEELRDVIGRPPRE 177 >gi|254511909|ref|ZP_05123976.1| hypothetical protein RKLH11_2451 [Rhodobacteraceae bacterium KLH11] gi|221535620|gb|EEE38608.1| hypothetical protein RKLH11_2451 [Rhodobacteraceae bacterium KLH11] Length = 191 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 95/179 (53%), Positives = 137/179 (76%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + ++ Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLEN--DEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F L+A+LQR+ +V++VST+ S P M SD+LRRQAD F++L L++ I R P E Sbjct: 119 GDGDFRPLIASLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELEDLRDVIGRPPRE 177 >gi|77462212|ref|YP_351716.1| hypothetical protein RSP_1667 [Rhodobacter sphaeroides 2.4.1] gi|126461074|ref|YP_001042188.1| hypothetical protein Rsph17029_0300 [Rhodobacter sphaeroides ATCC 17029] gi|221641166|ref|YP_002527428.1| hypothetical protein RSKD131_3067 [Rhodobacter sphaeroides KD131] gi|332560093|ref|ZP_08414415.1| hypothetical protein RSWS8N_13570 [Rhodobacter sphaeroides WS8N] gi|77386630|gb|ABA77815.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1] gi|126102738|gb|ABN75416.1| protein of unknown function DUF88 [Rhodobacter sphaeroides ATCC 17029] gi|221161947|gb|ACM02927.1| Hypothetical Protein RSKD131_3067 [Rhodobacter sphaeroides KD131] gi|332277805|gb|EGJ23120.1| hypothetical protein RSWS8N_13570 [Rhodobacter sphaeroides WS8N] Length = 190 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 94/181 (51%), Positives = 135/181 (74%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + + Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLEN--DDY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F LV +LQR+ +V++VST+ S P M +D+LRRQAD F++L L+ I R P E Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMIADELRRQADNFIELDELREVIGRPPREP 178 Query: 181 K 181 + Sbjct: 179 R 179 >gi|260428353|ref|ZP_05782332.1| RtsE [Citreicella sp. SE45] gi|260422845|gb|EEX16096.1| RtsE [Citreicella sp. SE45] Length = 191 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 94/181 (51%), Positives = 136/181 (75%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + ++ Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFVRRGKMVRAFYYTALLEN--DEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F LV +LQR+ +V++VST+ S P M +D+LRRQAD F++L L+ I R P E Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMIADELRRQADNFIELDELREVIGRPPREQ 178 Query: 181 K 181 + Sbjct: 179 Q 179 >gi|126728513|ref|ZP_01744329.1| hypothetical protein SSE37_21022 [Sagittula stellata E-37] gi|126711478|gb|EBA10528.1| hypothetical protein SSE37_21022 [Sagittula stellata E-37] Length = 195 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 94/181 (51%), Positives = 136/181 (75%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + ++ Sbjct: 6 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFARRGKMVRAFYYTALLEN--DEY 63 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 64 SPIRPLVDWLHYNGFTMVTKPAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 123 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F LV +LQR+ +V++VST+ S P M +D+LRRQAD F++L L+ I R P E Sbjct: 124 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMIADELRRQADNFIELDELREVIGRPPREQ 183 Query: 181 K 181 + Sbjct: 184 Q 184 >gi|146278613|ref|YP_001168772.1| hypothetical protein Rsph17025_2579 [Rhodobacter sphaeroides ATCC 17025] gi|145556854|gb|ABP71467.1| protein of unknown function DUF88 [Rhodobacter sphaeroides ATCC 17025] Length = 190 Score = 207 bits (528), Expect = 4e-52, Method: Composition-based stats. Identities = 94/181 (51%), Positives = 135/181 (74%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + + Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLEN--DDY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F LV +LQR+ +V++VST+ S P M +D+LRRQAD F++L L+ I R P E Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMIADELRRQADNFIELDELREVIGRPPREP 178 Query: 181 K 181 + Sbjct: 179 R 179 >gi|86137266|ref|ZP_01055844.1| hypothetical protein MED193_16367 [Roseobacter sp. MED193] gi|85826590|gb|EAQ46787.1| hypothetical protein MED193_16367 [Roseobacter sp. MED193] Length = 190 Score = 207 bits (527), Expect = 5e-52, Method: Composition-based stats. Identities = 97/181 (53%), Positives = 138/181 (76%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + ++ Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLEN--DEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+ELAVDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELAVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F L+A+LQR+ +V++VST+ S P M SD+LRRQAD F++L LK+ I R P E Sbjct: 119 GDGDFRPLIASLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELEELKDVIGRPPREH 178 Query: 181 K 181 Sbjct: 179 P 179 >gi|126739732|ref|ZP_01755424.1| hypothetical protein RSK20926_05732 [Roseobacter sp. SK209-2-6] gi|126719378|gb|EBA16088.1| hypothetical protein RSK20926_05732 [Roseobacter sp. SK209-2-6] Length = 190 Score = 207 bits (527), Expect = 5e-52, Method: Composition-based stats. Identities = 94/181 (51%), Positives = 138/181 (76%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++K+LGFDIDY+ L + F R ++RA+YYT ++ + ++ Sbjct: 1 MFYKDERLALFIDGSNLYAAAKSLGFDIDYKLLRQEFMRRGKLLRAFYYTALLEN--DEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F L+A+LQR+ +V++VST+ S P M SD+LRRQAD F++L LK+ I R P ++ Sbjct: 119 GDGDFRPLIASLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELEELKDVIGRPPRDN 178 Query: 181 K 181 Sbjct: 179 P 179 >gi|84500570|ref|ZP_00998819.1| hypothetical protein OB2597_11446 [Oceanicola batsensis HTCC2597] gi|84391523|gb|EAQ03855.1| hypothetical protein OB2597_11446 [Oceanicola batsensis HTCC2597] Length = 190 Score = 207 bits (527), Expect = 5e-52, Method: Composition-based stats. Identities = 94/181 (51%), Positives = 137/181 (75%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + ++ Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLEN--DEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F LV +LQR+ +V++VST+ S P M +D+LRRQAD F++L L++ I R P E Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMIADELRRQADNFIELDDLRDVIGRPPRET 178 Query: 181 K 181 + Sbjct: 179 Q 179 >gi|294678836|ref|YP_003579451.1| hypothetical protein RCAP_rcc03320 [Rhodobacter capsulatus SB 1003] gi|294477656|gb|ADE87044.1| protein of unknown function DUF88 [Rhodobacter capsulatus SB 1003] Length = 193 Score = 207 bits (526), Expect = 6e-52, Method: Composition-based stats. Identities = 95/182 (52%), Positives = 137/182 (75%), Gaps = 2/182 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + +++ Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFERRGKLVRAFYYTALLEN--EEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNG+ +V K AKE+T++ GR++VK +MD+ELAV+A E + L+H V+FS Sbjct: 59 SPIRPLVDWLHYNGYAMVTKPAKEYTDSMGRRKVKGNMDIELAVNAMELAPRLDHAVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F LV ALQR +V++VST+ S P M +D+LRRQAD F++L L+ I R P E Sbjct: 119 GDGDFRPLVEALQRMGVRVSVVSTIRSQPPMIADELRRQADNFIELDALREVIGRPPREP 178 Query: 181 KK 182 ++ Sbjct: 179 RE 180 >gi|56698038|ref|YP_168409.1| hypothetical protein SPO3206 [Ruegeria pomeroyi DSS-3] gi|56679775|gb|AAV96441.1| conserved hypothetical protein [Ruegeria pomeroyi DSS-3] Length = 190 Score = 207 bits (526), Expect = 6e-52, Method: Composition-based stats. Identities = 96/179 (53%), Positives = 136/179 (75%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + ++ Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKMLRAFYYTALLEN--DEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F LVA+LQR+ +V++VST+ S P M SD+LRRQAD F++L L+ I R P E Sbjct: 119 GDGDFRPLVASLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELEELREVIGRPPRE 177 >gi|163733871|ref|ZP_02141313.1| hypothetical protein RLO149_06148 [Roseobacter litoralis Och 149] gi|161392982|gb|EDQ17309.1| hypothetical protein RLO149_06148 [Roseobacter litoralis Och 149] Length = 182 Score = 206 bits (524), Expect = 1e-51, Method: Composition-based stats. Identities = 94/179 (52%), Positives = 136/179 (75%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++K+LGFDIDY+ L + F R ++RA+YYT ++ + ++ Sbjct: 1 MFYKDERLALFIDGSNLYAAAKSLGFDIDYKLLRQEFMRRGKLLRAFYYTALLEN--DEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWL+YNGF +V K AKE+T++ GR++VK +MD+ELAVDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLNYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELAVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F L+ +LQR +V++VST+ S P M SD+LRRQAD F++L LK+ I R P E Sbjct: 119 GDGDFRPLIESLQRSGVRVSVVSTIRSQPPMISDELRRQADNFIELDELKDVIGRPPRE 177 >gi|110678677|ref|YP_681684.1| hypothetical protein RD1_1356 [Roseobacter denitrificans OCh 114] gi|109454793|gb|ABG30998.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114] Length = 182 Score = 205 bits (522), Expect = 2e-51, Method: Composition-based stats. Identities = 93/179 (51%), Positives = 135/179 (75%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++K+LGFDIDY+ L + F R ++RA+YYT ++ + ++ Sbjct: 1 MFYKDERLALFIDGSNLYAAAKSLGFDIDYKLLRQEFMRRGKLLRAFYYTALLEN--DEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWL+YNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLNYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F L+ +LQR +V++VST+ S P M SD+LRRQAD F++L LK+ I R P E Sbjct: 119 GDGDFRPLIESLQRSGVRVSVVSTIRSQPPMISDELRRQADNFIELDELKDVIGRPPRE 177 >gi|254465558|ref|ZP_05078969.1| hypothetical protein RBY4I_2165 [Rhodobacterales bacterium Y4I] gi|206686466|gb|EDZ46948.1| hypothetical protein RBY4I_2165 [Rhodobacterales bacterium Y4I] Length = 189 Score = 205 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 95/180 (52%), Positives = 136/180 (75%), Gaps = 2/180 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + ++ Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLEN--DEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEYTDSLGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F L+A+LQR+ +V++VST+ S P M SD LRRQAD F++L L++ I R P E Sbjct: 119 GDGDFRPLIASLQRQGVRVSVVSTIRSQPPMISDDLRRQADNFIELEELRDVIGRPPREQ 178 >gi|259417563|ref|ZP_05741482.1| hypothetical protein SCH4B_2747 [Silicibacter sp. TrichCH4B] gi|259346469|gb|EEW58283.1| hypothetical protein SCH4B_2747 [Silicibacter sp. TrichCH4B] Length = 189 Score = 205 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 95/179 (53%), Positives = 137/179 (76%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYAS+KALGFDIDY+ L + F R ++RA+YYT ++ + ++ Sbjct: 1 MFYKDERLALFIDGSNLYASAKALGFDIDYKLLRQEFMRRGKLVRAFYYTALLEN--DEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFSMVTKPAKEYTDSMGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F L+A+LQR+ +V++VST+ S P M SD+LRRQAD F++L L++ I R P + Sbjct: 119 GDGDFRPLIASLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELEELRDVIGRPPRD 177 >gi|89070109|ref|ZP_01157439.1| hypothetical protein OG2516_09048 [Oceanicola granulosus HTCC2516] gi|89044330|gb|EAR50473.1| hypothetical protein OG2516_09048 [Oceanicola granulosus HTCC2516] Length = 193 Score = 205 bits (521), Expect = 2e-51, Method: Composition-based stats. Identities = 95/181 (52%), Positives = 135/181 (74%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++K+LGFDIDY+ L + F R ++RA+YYT ++ + + Sbjct: 1 MFYRDERLALFIDGSNLYAAAKSLGFDIDYKLLRQEFMRRGKLLRAFYYTALLEN--DDY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKEFT++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEFTDSQGRRKVKGNMDIELTVDAMEIASHVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F LV ALQRK +V++ ST+ S P M +D+LRRQAD F++L L+ + R P ED Sbjct: 119 GDGDFRPLVEALQRKGVRVSVCSTIRSQPPMIADELRRQADNFIELDELREVVGRPPRED 178 Query: 181 K 181 + Sbjct: 179 R 179 >gi|260432747|ref|ZP_05786718.1| RtsE [Silicibacter lacuscaerulensis ITI-1157] gi|260416575|gb|EEX09834.1| RtsE [Silicibacter lacuscaerulensis ITI-1157] Length = 190 Score = 204 bits (520), Expect = 3e-51, Method: Composition-based stats. Identities = 94/179 (52%), Positives = 137/179 (76%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + ++ Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLEN--DEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWL+YNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLNYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F L+A+LQR+ +V++VST+ S P M SD+LRRQAD F++L L++ I R P E Sbjct: 119 GDGDFRPLIASLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELDDLRDVIGRPPRE 177 >gi|83951635|ref|ZP_00960367.1| hypothetical protein ISM_13770 [Roseovarius nubinhibens ISM] gi|83836641|gb|EAP75938.1| hypothetical protein ISM_13770 [Roseovarius nubinhibens ISM] Length = 191 Score = 204 bits (520), Expect = 4e-51, Method: Composition-based stats. Identities = 96/180 (53%), Positives = 136/180 (75%), Gaps = 2/180 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA+ KALGFDIDY+ L F R ++RA+YYT ++ + ++ Sbjct: 1 MFYKDERLALFIDGSNLYAAGKALGFDIDYKLLRSEFMRRGKLLRAFYYTALLEN--DEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+ELAVDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFSMVTKPAKEYTDSQGRRKVKGNMDIELAVDAMELAPHVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F LV +LQR+ +V++VST+ S P M SD+LRRQAD F++L LK+ I R P ++ Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELDDLKDVIGRPPRDN 178 >gi|83855035|ref|ZP_00948565.1| hypothetical protein NAS141_09906 [Sulfitobacter sp. NAS-14.1] gi|83941558|ref|ZP_00954020.1| hypothetical protein EE36_04978 [Sulfitobacter sp. EE-36] gi|83842878|gb|EAP82045.1| hypothetical protein NAS141_09906 [Sulfitobacter sp. NAS-14.1] gi|83847378|gb|EAP85253.1| hypothetical protein EE36_04978 [Sulfitobacter sp. EE-36] Length = 181 Score = 204 bits (518), Expect = 5e-51, Method: Composition-based stats. Identities = 95/180 (52%), Positives = 135/180 (75%), Gaps = 2/180 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++K LGFDIDY+ L + F R ++RA+YYT ++ + ++ Sbjct: 1 MFYKDERLALFIDGSNLYAAAKNLGFDIDYKLLRQEFMRRGKLLRAFYYTALLEN--DEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWL+YNGF +V K AKE+T++ GR++VK +MD+ELAVDA E + L+H+VIFS Sbjct: 59 SPIRPLVDWLNYNGFSMVTKPAKEYTDSMGRRKVKGNMDIELAVDAMELAPHLDHIVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F LV +LQR+ +V++VST+ S P M SD+LRRQ D F++L L++ I R P E Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMISDELRRQVDNFIELEDLRDVIGRPPRET 178 >gi|84684017|ref|ZP_01011919.1| hypothetical protein 1099457000262_RB2654_16251 [Maritimibacter alkaliphilus HTCC2654] gi|84667770|gb|EAQ14238.1| hypothetical protein RB2654_16251 [Rhodobacterales bacterium HTCC2654] Length = 191 Score = 203 bits (517), Expect = 7e-51, Method: Composition-based stats. Identities = 96/181 (53%), Positives = 135/181 (74%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++K+LGFDIDY+ L + F R ++RA+YYT ++ + + Sbjct: 1 MFYKDERLALFIDGSNLYAAAKSLGFDIDYKLLRQEFMRRGKLLRAFYYTALLEN--DDY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKEFT++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFTMVTKPAKEFTDSMGRRKVKGNMDIELTVDAMEIAPHVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F LV LQRK +V++VST+ S P M +D+LRRQAD F++L LK I R P +D Sbjct: 119 GDGDFRPLVEGLQRKGVRVSVVSTIRSQPPMIADELRRQADNFIELDELKEVIGRPPRDD 178 Query: 181 K 181 + Sbjct: 179 R 179 >gi|254453678|ref|ZP_05067115.1| DUF88 [Octadecabacter antarcticus 238] gi|198268084|gb|EDY92354.1| DUF88 [Octadecabacter antarcticus 238] Length = 194 Score = 203 bits (517), Expect = 8e-51, Method: Composition-based stats. Identities = 95/182 (52%), Positives = 135/182 (74%), Gaps = 2/182 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF EK+ALFIDG+NLYA++KALGFDIDY+ L F R ++RA+YYT ++ + ++ Sbjct: 1 MFYRDEKLALFIDGSNLYAAAKALGFDIDYKLLRSEFMRRGKMLRAFYYTALLEN--DEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWL+YNGF +V K AKEFT++ GR+++K +MD+ELAVDA E + ++H+VIFS Sbjct: 59 SPIRPLVDWLNYNGFTMVTKPAKEFTDSMGRRKIKGNMDIELAVDALELAPHVDHIVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F LV +LQRK +V++VST+ S P M +D+LRRQ D F++L L++ I R E Sbjct: 119 GDGDFRPLVESLQRKGVRVSVVSTIRSQPPMIADELRRQCDNFIELDELRDVIGRPTREA 178 Query: 181 KK 182 + Sbjct: 179 PR 180 >gi|222148076|ref|YP_002549033.1| hypothetical protein Avi_1440 [Agrobacterium vitis S4] gi|221735064|gb|ACM36027.1| conserved hypothetical protein [Agrobacterium vitis S4] Length = 192 Score = 203 bits (516), Expect = 9e-51, Method: Composition-based stats. Identities = 119/181 (65%), Positives = 150/181 (82%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++ Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++V+ K AKEFT++ GR++VK +MD+ELA+DA EQSE ++HLVIFS Sbjct: 59 SSIRPLIDWLDYNGYKVITKPAKEFTDSMGRRKVKGNMDIELAIDAMEQSETVDHLVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG FTTLV ALQRK +KV++VST+ + P M +D LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFTTLVEALQRKGRKVSVVSTMSTQPPMIADDLRRQADHFIDLVSLKAEIGRDPSER 178 Query: 181 K 181 Sbjct: 179 P 179 >gi|227821396|ref|YP_002825366.1| hypothetical protein NGR_c08220 [Sinorhizobium fredii NGR234] gi|227340395|gb|ACP24613.1| hypothetical protein NGR_c08220 [Sinorhizobium fredii NGR234] Length = 192 Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats. Identities = 118/180 (65%), Positives = 151/180 (83%), Gaps = 2/180 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++ Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSLGRRKIKGNMDIELAIDAMEQSETVDHLVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG FTTLV ALQRK +KV++VST+ + P M +D LRRQAD+F+DLA L+ EI R+P E Sbjct: 119 GDGDFTTLVEALQRKGRKVSVVSTMSTQPPMIADDLRRQADHFIDLATLRGEIGREPSER 178 >gi|149913459|ref|ZP_01901992.1| hypothetical protein RAZWK3B_09161 [Roseobacter sp. AzwK-3b] gi|149812579|gb|EDM72408.1| hypothetical protein RAZWK3B_09161 [Roseobacter sp. AzwK-3b] Length = 190 Score = 202 bits (514), Expect = 1e-50, Method: Composition-based stats. Identities = 93/180 (51%), Positives = 135/180 (75%), Gaps = 2/180 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA+++ALGFDIDY+ L F R ++RA+YYT ++ + ++ Sbjct: 1 MFYKDERLALFIDGSNLYAAARALGFDIDYKLLRAEFMRRGKLLRAFYYTAMLEN--DEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWL+YNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLNYNGFSMVTKPAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F LV +LQR+ +V++VST+ S P M SD+LRRQAD F++L LK+ I R P + Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELDDLKDVIGRPPRDP 178 >gi|260576279|ref|ZP_05844271.1| protein of unknown function DUF88 [Rhodobacter sp. SW2] gi|259021547|gb|EEW24851.1| protein of unknown function DUF88 [Rhodobacter sp. SW2] Length = 190 Score = 202 bits (513), Expect = 2e-50, Method: Composition-based stats. Identities = 93/181 (51%), Positives = 137/181 (75%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF +++ALFIDG+NLYA++KALGFDIDYR L + F R ++RA+YYT ++ + ++ Sbjct: 1 MFYKDDRLALFIDGSNLYAAAKALGFDIDYRLLRQEFMRRGKLLRAFYYTALLEN--DEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL V+A E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFSMVTKPAKEYTDSQGRRKVKGNMDIELTVNAMELAPHVDHVVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F LV +LQR+ +V++VST+ S P M +D+LRRQAD F++L L++ I R P E Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMIADELRRQADNFIELDELRDVIGRPPREP 178 Query: 181 K 181 + Sbjct: 179 R 179 >gi|15964816|ref|NP_385169.1| hypothetical protein SMc02407 [Sinorhizobium meliloti 1021] gi|307300886|ref|ZP_07580655.1| protein of unknown function DUF88 [Sinorhizobium meliloti BL225C] gi|307320703|ref|ZP_07600115.1| protein of unknown function DUF88 [Sinorhizobium meliloti AK83] gi|15073995|emb|CAC45642.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021] gi|306893630|gb|EFN24404.1| protein of unknown function DUF88 [Sinorhizobium meliloti AK83] gi|306903841|gb|EFN34427.1| protein of unknown function DUF88 [Sinorhizobium meliloti BL225C] Length = 192 Score = 201 bits (512), Expect = 2e-50, Method: Composition-based stats. Identities = 118/180 (65%), Positives = 151/180 (83%), Gaps = 2/180 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++ Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSLGRRKIKGNMDIELAIDAMEQSESVDHLVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG FTTLV ALQRK +KV++VST+ + P M +D LRRQAD+F+DLA L+ EI R+P E Sbjct: 119 GDGDFTTLVEALQRKGRKVSVVSTMSTQPPMIADDLRRQADHFIDLATLRGEIGREPSER 178 >gi|51102762|gb|AAT95984.1| RtsE [Sinorhizobium meliloti] Length = 191 Score = 201 bits (512), Expect = 3e-50, Method: Composition-based stats. Identities = 118/180 (65%), Positives = 151/180 (83%), Gaps = 2/180 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++ Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSLGRRKIKGNMDIELAIDAMEQSESVDHLVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG FTTLV ALQRK +KV++VST+ + P M +D LRRQAD+F+DLA L+ EI R+P E Sbjct: 119 GDGDFTTLVEALQRKGRKVSVVSTMSTQPPMIADDLRRQADHFIDLATLRGEIGREPSER 178 >gi|126726103|ref|ZP_01741945.1| hypothetical protein RB2150_07843 [Rhodobacterales bacterium HTCC2150] gi|126705307|gb|EBA04398.1| hypothetical protein RB2150_07843 [Rhodobacterales bacterium HTCC2150] Length = 191 Score = 201 bits (511), Expect = 3e-50, Method: Composition-based stats. Identities = 93/182 (51%), Positives = 138/182 (75%), Gaps = 2/182 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++K+LGFDIDY+ L F R ++RA+YYT ++ + ++ Sbjct: 1 MFYRDERLALFIDGSNLYAAAKSLGFDIDYKLLRTEFMRRGKLLRAFYYTALLEN--DEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFNMVTKPAKEYTDSQGRRKVKGNMDIELTVDALELAPHVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F ++AA+QR+ +V++VST+ S+P M SD+LRRQAD F++L LK+ + R P E Sbjct: 119 GDGDFRPMIAAVQRQGVRVSVVSTIRSNPPMISDELRRQADNFIELDELKDVVGRPPREM 178 Query: 181 KK 182 + Sbjct: 179 PE 180 >gi|150395899|ref|YP_001326366.1| hypothetical protein Smed_0675 [Sinorhizobium medicae WSM419] gi|150027414|gb|ABR59531.1| protein of unknown function DUF88 [Sinorhizobium medicae WSM419] Length = 193 Score = 201 bits (511), Expect = 4e-50, Method: Composition-based stats. Identities = 118/180 (65%), Positives = 151/180 (83%), Gaps = 2/180 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++ Sbjct: 2 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 59 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS Sbjct: 60 SSIRPLIDWLDYNGYKVVTKPAKEFTDSLGRRKIKGNMDIELAIDAMEQSESVDHLVIFS 119 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG FTTLV ALQRK +KV++VST+ + P M +D LRRQAD+F+DLA L+ EI R+P E Sbjct: 120 GDGDFTTLVEALQRKGRKVSVVSTMATQPPMIADDLRRQADHFIDLASLRAEIGREPSER 179 >gi|163744864|ref|ZP_02152224.1| hypothetical protein OIHEL45_04735 [Oceanibulbus indolifex HEL-45] gi|161381682|gb|EDQ06091.1| hypothetical protein OIHEL45_04735 [Oceanibulbus indolifex HEL-45] Length = 184 Score = 201 bits (511), Expect = 4e-50, Method: Composition-based stats. Identities = 95/180 (52%), Positives = 135/180 (75%), Gaps = 2/180 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + ++ Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLEN--DEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWL+YNGF +V K AKE+T++ GR++VK MD+ELAVDA E + ++H+VIFS Sbjct: 59 SPIRPLVDWLNYNGFSMVTKPAKEYTDSMGRRKVKGDMDIELAVDAMELAPRVDHIVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F LV +LQR+ +V++VST+ S P M SD LRRQAD F++L L++ I R P + Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMISDDLRRQADNFIELDDLRDVIGRPPRDP 178 >gi|255263963|ref|ZP_05343305.1| hypothetical protein TR2A62_2961 [Thalassiobium sp. R2A62] gi|255106298|gb|EET48972.1| hypothetical protein TR2A62_2961 [Thalassiobium sp. R2A62] Length = 192 Score = 201 bits (510), Expect = 4e-50, Method: Composition-based stats. Identities = 95/179 (53%), Positives = 136/179 (75%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++KALGFDIDY+ L F R ++RA+YYT ++ + ++ Sbjct: 1 MFYRDERLALFIDGSNLYAAAKALGFDIDYKLLRTEFMRRGKMLRAFYYTALLEN--DEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWL+YNGF +V K AKEFT++ GR+++K +MD+ELAVDA E + ++H+VIFS Sbjct: 59 SPIRPLVDWLNYNGFTMVTKPAKEFTDSIGRRKIKGNMDIELAVDAMELAPHVDHIVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F LV A+QRK +V++VST+ S P M +D+LRRQAD F++L L++ + R P E Sbjct: 119 GDGDFRPLVEAIQRKGVRVSVVSTIRSQPPMIADELRRQADNFIELDELRDVVGRPPRE 177 >gi|84515155|ref|ZP_01002518.1| hypothetical protein SKA53_13063 [Loktanella vestfoldensis SKA53] gi|84511314|gb|EAQ07768.1| hypothetical protein SKA53_13063 [Loktanella vestfoldensis SKA53] Length = 187 Score = 201 bits (510), Expect = 5e-50, Method: Composition-based stats. Identities = 95/181 (52%), Positives = 136/181 (75%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA+++ALGFDIDY+ L + F R ++RA+YYT ++ + ++ Sbjct: 1 MFYRDERLALFIDGSNLYAAARALGFDIDYKLLRQEFMRRGKLLRAFYYTALLEN--DEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNG+ ++ K AKEFT++ GR++VK +MD+ELAVDA E + L+H VIFS Sbjct: 59 SPIRPLVDWLHYNGYSMITKPAKEFTDSLGRRKVKGNMDIELAVDAMELTPYLDHAVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F L+ ALQRK +V++VST+ S P M +D+LRRQAD F++L L++ I R E Sbjct: 119 GDGDFRPLIEALQRKGVRVSVVSTIRSQPPMIADELRRQADNFIELEELRDVIGRPAREP 178 Query: 181 K 181 + Sbjct: 179 R 179 >gi|227819053|ref|YP_002823024.1| hypothetical protein NGR_b08150 [Sinorhizobium fredii NGR234] gi|227338052|gb|ACP22271.1| conserved hypothetical protein [Sinorhizobium fredii NGR234] Length = 194 Score = 201 bits (510), Expect = 5e-50, Method: Composition-based stats. Identities = 118/179 (65%), Positives = 149/179 (83%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANL+A+SK LGFDIDYRKLL+AFRSRA ++RAYYYT ++ D +F Sbjct: 1 MFDPREKIALFIDGANLFATSKTLGFDIDYRKLLEAFRSRAYLLRAYYYTALIEDL--EF 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG+ VV K AKEFT++ GR+++K SMD+ELA+DA E S+ ++H VIFS Sbjct: 59 SSIRPLIDWLDYNGYTVVTKPAKEFTDSQGRRKIKGSMDIELAIDAMEHSQTVDHFVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG FT LV ALQRK +KV++VST+L+ P M +DQLRRQAD+F+DLA L++EI R P E Sbjct: 119 GDGDFTPLVEALQRKGRKVSVVSTILTQPPMIADQLRRQADHFIDLATLRSEIGRHPRE 177 >gi|85705102|ref|ZP_01036202.1| hypothetical protein ROS217_04305 [Roseovarius sp. 217] gi|85670424|gb|EAQ25285.1| hypothetical protein ROS217_04305 [Roseovarius sp. 217] Length = 190 Score = 200 bits (509), Expect = 6e-50, Method: Composition-based stats. Identities = 95/179 (53%), Positives = 135/179 (75%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA+ KALGFDIDY+ L F R ++RA+YYT ++ + ++ Sbjct: 1 MFYKDERLALFIDGSNLYAAGKALGFDIDYKLLRSEFMRRGKLLRAFYYTALLEN--DEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNG+ +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGYSMVTKPAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F LV +LQR+ +V++VST+ S P M SD+LRRQAD F++LA LK+ I R P + Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELADLKDVIGRPPRD 177 >gi|126733749|ref|ZP_01749496.1| hypothetical protein RCCS2_06319 [Roseobacter sp. CCS2] gi|126716615|gb|EBA13479.1| hypothetical protein RCCS2_06319 [Roseobacter sp. CCS2] Length = 193 Score = 200 bits (509), Expect = 6e-50, Method: Composition-based stats. Identities = 92/181 (50%), Positives = 137/181 (75%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++K+LGFDIDY+ L + F R ++RA+YYT ++ + ++ Sbjct: 1 MFYRDERLALFIDGSNLYAAAKSLGFDIDYKLLRQEFMRRGKMLRAFYYTALLEN--DEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWL+YNGF +V K AKE+T++ GR++VK +MD+ELAVDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLNYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELAVDAMELAPYVDHVVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F LV +LQRK +V++VST+ S P M +D+LRRQAD F++L L++ + R E Sbjct: 119 GDGDFRPLVESLQRKGVRVSVVSTIRSQPPMIADELRRQADNFIELDELRDVVGRPTREP 178 Query: 181 K 181 + Sbjct: 179 R 179 >gi|190891066|ref|YP_001977608.1| hypothetical protein RHECIAT_CH0001451 [Rhizobium etli CIAT 652] gi|218508406|ref|ZP_03506284.1| hypothetical protein RetlB5_12894 [Rhizobium etli Brasil 5] gi|190696345|gb|ACE90430.1| hypothetical conserved protein [Rhizobium etli CIAT 652] gi|327191317|gb|EGE58350.1| hypothetical protein RHECNPAF_32006 [Rhizobium etli CNPAF512] Length = 193 Score = 200 bits (509), Expect = 7e-50, Method: Composition-based stats. Identities = 116/180 (64%), Positives = 149/180 (82%), Gaps = 2/180 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++ Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSMGRRKIKGNMDIELAIDAMEQSETVDHLVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG FT LV ALQR+ +KV+++ST+ + P M +D LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFTNLVEALQRRGRKVSVISTMATQPPMIADDLRRQADHFIDLLSLKAEIGRDPSER 178 >gi|254439991|ref|ZP_05053485.1| conserved hypothetical protein [Octadecabacter antarcticus 307] gi|198255437|gb|EDY79751.1| conserved hypothetical protein [Octadecabacter antarcticus 307] Length = 195 Score = 200 bits (509), Expect = 7e-50, Method: Composition-based stats. Identities = 96/182 (52%), Positives = 135/182 (74%), Gaps = 2/182 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF EK+ALFIDG+NLYAS+K+LGFDIDY+ L F R ++RAYYYT ++ + ++ Sbjct: 1 MFYRDEKLALFIDGSNLYASAKSLGFDIDYKLLRAEFMRRGKMLRAYYYTALLEN--DEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWL+YNGF +V K AKEFT++ GR+++K +MD+ELAVDA E + ++H+VIFS Sbjct: 59 SPIRPLVDWLNYNGFTMVTKPAKEFTDSMGRRKIKGNMDIELAVDALELAPHVDHIVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F LV +LQRK +V++VST+ S P M +D+LRRQ D F++L L++ I R E Sbjct: 119 GDGDFRPLVESLQRKGVRVSVVSTIRSQPPMIADELRRQCDNFIELDELRDVIGRPVREA 178 Query: 181 KK 182 + Sbjct: 179 PR 180 >gi|163760601|ref|ZP_02167682.1| hypothetical protein HPDFL43_11921 [Hoeflea phototrophica DFL-43] gi|162282216|gb|EDQ32506.1| hypothetical protein HPDFL43_11921 [Hoeflea phototrophica DFL-43] Length = 196 Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats. Identities = 115/182 (63%), Positives = 151/182 (82%), Gaps = 2/182 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYA+SK+L FDIDYRKLLK+F+ R ++RAYYYT ++ D Q++ Sbjct: 1 MFDPREKIALFIDGANLYAASKSLNFDIDYRKLLKSFQGRGYLLRAYYYTALIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+ELA+DA EQ+E ++HLVIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSMGRRKVKGNMDIELAIDAMEQAEVVDHLVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG FT+LV ALQRK +KVT+VS++ + P M +D LRRQADYF+DL+ LK+EI R+ E Sbjct: 119 GDGDFTSLVEALQRKGRKVTVVSSLSTQPPMIADDLRRQADYFLDLSTLKSEIGRESSER 178 Query: 181 KK 182 + Sbjct: 179 PQ 180 >gi|254460504|ref|ZP_05073920.1| hypothetical protein RB2083_1094 [Rhodobacterales bacterium HTCC2083] gi|206677093|gb|EDZ41580.1| hypothetical protein RB2083_1094 [Rhodobacteraceae bacterium HTCC2083] Length = 190 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 94/180 (52%), Positives = 134/180 (74%), Gaps = 2/180 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG NLYA++KALGFDIDY+ L F R ++RA+YYT ++ + ++ Sbjct: 1 MFYKDERLALFIDGLNLYAAAKALGFDIDYKLLRTEFMRRGKMLRAFYYTALLEN--DEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWL+YNGF +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLNYNGFTMVTKQAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F LV +LQR+ +V++VST+ S P M SD+LRRQAD F++L LK+ + R P E Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELDELKDVLGRPPREP 178 >gi|116251270|ref|YP_767108.1| hypothetical protein RL1504 [Rhizobium leguminosarum bv. viciae 3841] gi|115255918|emb|CAK06999.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae 3841] Length = 193 Score = 199 bits (506), Expect = 1e-49, Method: Composition-based stats. Identities = 116/180 (64%), Positives = 149/180 (82%), Gaps = 2/180 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++ Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSMGRRKIKGNMDIELAIDAMEQSETVDHLVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG FT LV ALQR+ +KV+++ST+ + P M +D LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFTNLVEALQRRGRKVSVISTMATQPPMIADDLRRQADHFIDLLSLKAEIGRDPSER 178 >gi|241203882|ref|YP_002974978.1| hypothetical protein Rleg_1144 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857772|gb|ACS55439.1| protein of unknown function DUF88 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 193 Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats. Identities = 116/180 (64%), Positives = 149/180 (82%), Gaps = 2/180 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++ Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSMGRRKIKGNMDIELAIDAMEQSETVDHLVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG FT LV ALQR+ +KV+++ST+ + P M +D LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFTNLVEALQRRGRKVSVISTMATQPPMIADDLRRQADHFIDLLSLKAEIGRDPSER 178 >gi|254487193|ref|ZP_05100398.1| DUF88 [Roseobacter sp. GAI101] gi|214044062|gb|EEB84700.1| DUF88 [Roseobacter sp. GAI101] Length = 181 Score = 199 bits (505), Expect = 2e-49, Method: Composition-based stats. Identities = 94/180 (52%), Positives = 135/180 (75%), Gaps = 2/180 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++K+LGFDIDY+ L + F R ++RA+YYT ++ + +++ Sbjct: 1 MFYKDERLALFIDGSNLYAAAKSLGFDIDYKLLRQEFMRRGKLLRAFYYTALLEN--EEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWL+YNGF +V K AKE+T++ GR++VK +MD+ELAVDA E + L+H+VIFS Sbjct: 59 SPIRPLVDWLNYNGFSMVTKPAKEYTDSMGRRKVKGNMDIELAVDAMELAPHLDHIVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F LV +LQR+ +V++VST+ S P M SD LRRQ D F++L L++ I R E Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMISDDLRRQVDNFIELEDLRDVIGRPARET 178 >gi|149200815|ref|ZP_01877790.1| hypothetical protein RTM1035_14357 [Roseovarius sp. TM1035] gi|149145148|gb|EDM33174.1| hypothetical protein RTM1035_14357 [Roseovarius sp. TM1035] Length = 190 Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats. Identities = 95/179 (53%), Positives = 134/179 (74%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA+ KALGFDIDY+ L F R ++RA+YYT ++ + ++ Sbjct: 1 MFYKDERLALFIDGSNLYAAGKALGFDIDYKLLRSEFMRRGKLLRAFYYTALLEN--DEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNG+ +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGYSMVTKPAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHVVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F LV +LQR+ +V++VST+ S P M SD LRRQAD F++LA LK+ I R P + Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMISDDLRRQADNFIELADLKDVIGRPPRD 177 >gi|159184584|ref|NP_354050.2| hypothetical protein Atu1028 [Agrobacterium tumefaciens str. C58] gi|159139886|gb|AAK86835.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58] Length = 189 Score = 198 bits (503), Expect = 3e-49, Method: Composition-based stats. Identities = 119/181 (65%), Positives = 150/181 (82%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++ Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT+ GR+++K +MD+ELAVDA EQSE ++HLV+FS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDALGRRKIKGNMDIELAVDAMEQSETVDHLVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG FTTLV ALQRK +KV++VST+ + P+M +D LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFTTLVDALQRKGRKVSVVSTMATQPAMIADDLRRQADHFIDLMTLKAEIGRDPSER 178 Query: 181 K 181 Sbjct: 179 P 179 >gi|254504996|ref|ZP_05117147.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11] gi|222441067|gb|EEE47746.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11] Length = 196 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 105/182 (57%), Positives = 146/182 (80%), Gaps = 2/182 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REK+ALFIDGANLY+++KA+GFDIDY++LLK F+ +A ++RAYYYT ++ D Q++ Sbjct: 1 MFDAREKVALFIDGANLYSTAKAIGFDIDYKRLLKEFQGQAYLLRAYYYTALIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++V+ K KEF ++ GR++VK +MD+ELAVDA E E ++H+V+FS Sbjct: 59 SSIRPLIDWLDYNGYKVITKPVKEFVDSAGRRKVKGNMDIELAVDAMELVESVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F +LV ALQRK +KV++VST+ + P M +D LRRQAD+F+DLA L N+I RDP E Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLKTQPPMIADDLRRQADHFIDLASLANKIGRDPSER 178 Query: 181 KK 182 + Sbjct: 179 PQ 180 >gi|86357021|ref|YP_468913.1| hypothetical protein RHE_CH01383 [Rhizobium etli CFN 42] gi|86281123|gb|ABC90186.1| hypothetical conserved protein [Rhizobium etli CFN 42] Length = 193 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 116/180 (64%), Positives = 149/180 (82%), Gaps = 2/180 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++ Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSMGRRKIKGNMDIELAIDAMEQSETVDHLVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG FT LV ALQR+ +KV+++ST+ + P M +D LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFTNLVEALQRRGRKVSVISTMATQPPMIADDLRRQADHFIDLLSLKAEIGRDPAER 178 >gi|209548594|ref|YP_002280511.1| hypothetical protein Rleg2_0991 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209534350|gb|ACI54285.1| protein of unknown function DUF88 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 195 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 116/180 (64%), Positives = 149/180 (82%), Gaps = 2/180 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++ Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSMGRRKIKGNMDIELAIDAMEQSETVDHLVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG FT LV ALQR+ +KV+++ST+ + P M +D LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFTNLVEALQRRGRKVSVISTMSTQPPMIADDLRRQADHFIDLLSLKAEIGRDPAER 178 >gi|222085384|ref|YP_002543914.1| hypothetical protein Arad_1584 [Agrobacterium radiobacter K84] gi|221722832|gb|ACM25988.1| conserved hypothetical protein [Agrobacterium radiobacter K84] Length = 194 Score = 197 bits (502), Expect = 4e-49, Method: Composition-based stats. Identities = 116/182 (63%), Positives = 151/182 (82%), Gaps = 2/182 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++ Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSMGRRKIKGNMDIELAIDAMEQSETVDHLVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG FTTLV ALQR+ +KV+++ST+ + P M +D LRRQAD+F+DL LK EI RDP + Sbjct: 119 GDGDFTTLVEALQRRGRKVSVISTMATQPPMIADDLRRQADHFIDLVSLKAEIGRDPSDR 178 Query: 181 KK 182 + Sbjct: 179 PQ 180 >gi|119384144|ref|YP_915200.1| hypothetical protein Pden_1403 [Paracoccus denitrificans PD1222] gi|119373911|gb|ABL69504.1| protein of unknown function DUF88 [Paracoccus denitrificans PD1222] Length = 183 Score = 197 bits (502), Expect = 5e-49, Method: Composition-based stats. Identities = 93/179 (51%), Positives = 134/179 (74%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF +++ALFIDG+NLYA++K+LGFDIDY+ L + F R +IRAYYYT ++ + + + Sbjct: 1 MFYKDDRLALFIDGSNLYAAAKSLGFDIDYKLLRQEFERRGKLIRAYYYTALLEN--EDY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNG+ +V K A+E+T+ GR++VK +MDVEL ++A E + L+H V+FS Sbjct: 59 SPIRPLVDWLHYNGYSMVTKPAREYTDALGRRKVKGNMDVELVINAMELAPRLDHAVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG F LV ALQR+ +V++VST+ S P M +D+LRRQAD F++L L++ I R P E Sbjct: 119 GDGDFRPLVEALQRQGVRVSVVSTMRSQPPMIADELRRQADNFIELDALRDIIGRPPRE 177 >gi|218678619|ref|ZP_03526516.1| hypothetical protein RetlC8_06939 [Rhizobium etli CIAT 894] Length = 193 Score = 197 bits (501), Expect = 5e-49, Method: Composition-based stats. Identities = 116/180 (64%), Positives = 149/180 (82%), Gaps = 2/180 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++ Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSMGRRKIKGNMDIELAIDAMEQSETVDHLVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG FT LV ALQR+ +KV+++ST+ + P M +D LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFTNLVEALQRRGRKVSVISTMATQPPMIADDLRRQADHFIDLLSLKAEIGRDPAER 178 >gi|13476434|ref|NP_108004.1| hypothetical protein mll7752 [Mesorhizobium loti MAFF303099] gi|319784512|ref|YP_004143988.1| hypothetical protein Mesci_4829 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|14027195|dbj|BAB54149.1| mll7752 [Mesorhizobium loti MAFF303099] gi|317170400|gb|ADV13938.1| hypothetical protein Mesci_4829 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 193 Score = 196 bits (499), Expect = 8e-49, Method: Composition-based stats. Identities = 116/181 (64%), Positives = 146/181 (80%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYA+S+ALGFDIDYRKLL +F+ R ++RAYYYT +V D Q++ Sbjct: 1 MFDPREKIALFIDGANLYATSRALGFDIDYRKLLSSFQKRGYLLRAYYYTALVED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNGF+VV K AKEFT++ GR+++K +MD+EL VDA E ++ ++H VIFS Sbjct: 59 SSIRPLIDWLDYNGFKVVTKPAKEFTDSTGRRKIKGNMDIELTVDALELADVVDHYVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F TLV ALQR+ +KV+IVST+ S P M SD LRRQAD+F+DL LKNE+ RDP E Sbjct: 119 GDGDFRTLVEALQRRGRKVSIVSTMASQPPMISDDLRRQADHFIDLTTLKNEVGRDPSER 178 Query: 181 K 181 Sbjct: 179 P 179 >gi|83593194|ref|YP_426946.1| hypothetical protein Rru_A1859 [Rhodospirillum rubrum ATCC 11170] gi|83576108|gb|ABC22659.1| Protein of unknown function DUF88 [Rhodospirillum rubrum ATCC 11170] Length = 214 Score = 196 bits (499), Expect = 9e-49, Method: Composition-based stats. Identities = 98/183 (53%), Positives = 138/183 (75%), Gaps = 4/183 (2%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 +F P+E+I LFIDG+NLYA+++ALGFDIDY++LL+ F ++ +IRA+YYT +V D Q++ Sbjct: 2 IFYPQERIGLFIDGSNLYAAARALGFDIDYKRLLELFAAKGRLIRAFYYTALVED--QEY 59 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWL YNG+ +V K KEFT+ GR+++K +MD+ELA+D E + L+H+V+FS Sbjct: 60 SPIRPLVDWLDYNGYTMVTKPTKEFTDATGRRKIKGNMDIELAIDVMEMAPHLDHIVLFS 119 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP--D 178 GDG F LV A+QRK +VT+VSTV S P M +D+LRRQAD F++L L+ IAR P Sbjct: 120 GDGDFRRLVDAVQRKGLRVTVVSTVRSQPPMVADELRRQADTFIELLDLEPSIARAPLHR 179 Query: 179 EDK 181 E Sbjct: 180 EPP 182 >gi|254469949|ref|ZP_05083354.1| DUF88 [Pseudovibrio sp. JE062] gi|211961784|gb|EEA96979.1| DUF88 [Pseudovibrio sp. JE062] Length = 194 Score = 196 bits (497), Expect = 1e-48, Method: Composition-based stats. Identities = 100/181 (55%), Positives = 145/181 (80%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLY+++KA+GFDIDY++LLK F+S+ ++RAYYYT +V + Q++ Sbjct: 1 MFDPREKIALFIDGANLYSTAKAIGFDIDYKRLLKEFQSKGYLLRAYYYTALVEE--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K KEF ++ GR+++K +MD+ELAVDA + + ++H+V+FS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPVKEFVDSAGRRKIKGNMDIELAVDAMQLIDHVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F +LV ALQR+ +KV++VST+ + P M +D LRRQAD+F++L+ L + RDP+E Sbjct: 119 GDGDFRSLVEALQRRGRKVSVVSTLQTQPPMIADDLRRQADHFIELSTLMQRVGRDPNER 178 Query: 181 K 181 Sbjct: 179 P 179 >gi|325292407|ref|YP_004278271.1| hypothetical protein AGROH133_05017 [Agrobacterium sp. H13-3] gi|325060260|gb|ADY63951.1| hypothetical protein AGROH133_05017 [Agrobacterium sp. H13-3] Length = 189 Score = 196 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 118/181 (65%), Positives = 150/181 (82%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R ++RAYYYT ++ D Q++ Sbjct: 1 MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT+ GR+++K +MD+ELAVDA EQSE ++HLV+FS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDALGRRKIKGNMDIELAVDAMEQSETVDHLVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG FT LV ALQRK +KV++VST+ + P+M +D LRRQAD+F+DL LK EI RDP+E Sbjct: 119 GDGDFTKLVDALQRKGRKVSVVSTMATQPAMIADDLRRQADHFIDLMTLKAEIGRDPNER 178 Query: 181 K 181 Sbjct: 179 P 179 >gi|170748311|ref|YP_001754571.1| hypothetical protein Mrad2831_1893 [Methylobacterium radiotolerans JCM 2831] gi|170654833|gb|ACB23888.1| protein of unknown function DUF88 [Methylobacterium radiotolerans JCM 2831] Length = 213 Score = 196 bits (497), Expect = 2e-48, Method: Composition-based stats. Identities = 97/177 (54%), Positives = 138/177 (77%), Gaps = 2/177 (1%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 ++ A+FIDGANLYA++KALGFDIDY+KLLK F+SR ++RA+YYT ++ D Q++S + Sbjct: 4 TQRSAIFIDGANLYATTKALGFDIDYKKLLKEFQSRENLLRAFYYTAMIED--QEYSSIR 61 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 PL+DWL YNG++VV K KEFT++ GR++ K +MD+ELA+DA E S ++H+++FSGDG Sbjct: 62 PLIDWLDYNGYRVVTKPVKEFTDSMGRRKYKGNMDIELAIDALELSPHIDHMILFSGDGD 121 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 F +LV A+QR+ KVT++ST+ + P+M SD+LRRQAD F+DLA L I R+P E Sbjct: 122 FRSLVEAMQRRGVKVTVISTIQTQPAMISDELRRQADEFVDLASLAGRIGREPGERP 178 >gi|260462331|ref|ZP_05810539.1| protein of unknown function DUF88 [Mesorhizobium opportunistum WSM2075] gi|259031825|gb|EEW33093.1| protein of unknown function DUF88 [Mesorhizobium opportunistum WSM2075] Length = 193 Score = 195 bits (495), Expect = 2e-48, Method: Composition-based stats. Identities = 116/181 (64%), Positives = 146/181 (80%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYA+S+ALGFDIDYRKLL +F+ R ++RAYYYT +V D Q++ Sbjct: 1 MFDPREKIALFIDGANLYATSRALGFDIDYRKLLSSFQKRGYLLRAYYYTALVED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNGF+VV K AKEFT++ GR+++K +MD+EL VDA E ++ ++H VIFS Sbjct: 59 SSIRPLIDWLDYNGFKVVTKPAKEFTDSTGRRKIKGNMDIELTVDALELADVVDHYVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F TLV ALQR+ +KV+IVST+ S P M SD LRRQAD+F+DL LKNE+ RDP E Sbjct: 119 GDGDFRTLVEALQRRGRKVSIVSTMASQPPMISDDLRRQADHFIDLVTLKNEVGRDPSER 178 Query: 181 K 181 Sbjct: 179 P 179 >gi|159042747|ref|YP_001531541.1| hypothetical protein Dshi_0191 [Dinoroseobacter shibae DFL 12] gi|157910507|gb|ABV91940.1| protein of unknown function DUF88 [Dinoroseobacter shibae DFL 12] Length = 190 Score = 194 bits (493), Expect = 5e-48, Method: Composition-based stats. Identities = 92/174 (52%), Positives = 132/174 (75%), Gaps = 2/174 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF +++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + ++ Sbjct: 1 MFYKDDRLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLEN--DEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+ELAVDA E + ++H V+FS Sbjct: 59 SPIRPLVDWLHYNGFSMVTKPAKEYTDSQGRRKVKGNMDIELAVDAMELAPHMDHAVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 GDG F L+ +LQR+ +V++VST+ S P M SD+LRRQAD F++L LK I Sbjct: 119 GDGDFRPLIESLQRRGVRVSVVSTIRSHPPMISDELRRQADNFIELDELKEIIG 172 >gi|256060778|ref|ZP_05450940.1| hypothetical protein Bneo5_10505 [Brucella neotomae 5K33] gi|256369087|ref|YP_003106595.1| hypothetical protein BMI_I648 [Brucella microti CCM 4915] gi|261324768|ref|ZP_05963965.1| conserved hypothetical protein [Brucella neotomae 5K33] gi|306842086|ref|ZP_07474758.1| cytoplasmic protein [Brucella sp. BO2] gi|306845250|ref|ZP_07477826.1| cytoplasmic protein [Brucella sp. BO1] gi|255999247|gb|ACU47646.1| hypothetical protein BMI_I648 [Brucella microti CCM 4915] gi|261300748|gb|EEY04245.1| conserved hypothetical protein [Brucella neotomae 5K33] gi|306274409|gb|EFM56216.1| cytoplasmic protein [Brucella sp. BO1] gi|306287836|gb|EFM59259.1| cytoplasmic protein [Brucella sp. BO2] Length = 191 Score = 194 bits (492), Expect = 6e-48, Method: Composition-based stats. Identities = 114/180 (63%), Positives = 146/180 (81%), Gaps = 2/180 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REKIALFIDGANLYA+SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++ Sbjct: 1 MFDSREKIALFIDGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKAAKEFTDSTGRRKVKGNMDIELTVDAMQLTDTVDHFVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSER 178 >gi|239831485|ref|ZP_04679814.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301] gi|239823752|gb|EEQ95320.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301] Length = 191 Score = 193 bits (491), Expect = 7e-48, Method: Composition-based stats. Identities = 113/181 (62%), Positives = 145/181 (80%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REKIALFIDGANLYA+SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++ Sbjct: 1 MFDSREKIALFIDGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKAAKEFTDSTGRRKVKGNMDIELTVDAMQLTDTVDHFVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F +L ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFRSLAEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSER 178 Query: 181 K 181 Sbjct: 179 P 179 >gi|300023756|ref|YP_003756367.1| hypothetical protein Hden_2248 [Hyphomicrobium denitrificans ATCC 51888] gi|299525577|gb|ADJ24046.1| protein of unknown function DUF88 [Hyphomicrobium denitrificans ATCC 51888] Length = 213 Score = 193 bits (491), Expect = 8e-48, Method: Composition-based stats. Identities = 98/186 (52%), Positives = 139/186 (74%), Gaps = 7/186 (3%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F P E+IALFIDGANLYA++K+LGFDIDY++LL FR + ++RA YYT + + Q++S Sbjct: 3 FYPTERIALFIDGANLYATAKSLGFDIDYKRLLGLFRQKGQLVRALYYTALAEE--QEYS 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 + PL+DWL YNGF +V K KEFT+ GR++VK +MD+EL VDA ++ L+H+VIFSG Sbjct: 61 SIRPLIDWLDYNGFSMVTKPTKEFTDATGRRKVKGNMDIELTVDAMLLADSLDHIVIFSG 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD----- 176 DG F +LVAALQ+K K+V+++ST+ + P M +D+LRRQAD F+DLA L++++ R Sbjct: 121 DGDFRSLVAALQQKGKRVSVISTLQTQPPMVADELRRQADQFIDLADLEDQVGRAQNGRG 180 Query: 177 PDEDKK 182 P E + Sbjct: 181 PRESSR 186 >gi|254718792|ref|ZP_05180603.1| hypothetical protein Bru83_04498 [Brucella sp. 83/13] gi|265983772|ref|ZP_06096507.1| conserved hypothetical protein [Brucella sp. 83/13] gi|306837511|ref|ZP_07470386.1| cytoplasmic protein [Brucella sp. NF 2653] gi|264662364|gb|EEZ32625.1| conserved hypothetical protein [Brucella sp. 83/13] gi|306407403|gb|EFM63607.1| cytoplasmic protein [Brucella sp. NF 2653] Length = 202 Score = 193 bits (491), Expect = 9e-48, Method: Composition-based stats. Identities = 113/182 (62%), Positives = 146/182 (80%), Gaps = 2/182 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REKI LFIDGANLYA+SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++ Sbjct: 1 MFDSREKIVLFIDGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKAAKEFTDSTGRRKVKGNMDIELTVDAMQLTDTVDHFVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSER 178 Query: 181 KK 182 + Sbjct: 179 AR 180 >gi|307313917|ref|ZP_07593532.1| protein of unknown function DUF88 [Sinorhizobium meliloti BL225C] gi|306899191|gb|EFN29829.1| protein of unknown function DUF88 [Sinorhizobium meliloti BL225C] Length = 196 Score = 193 bits (490), Expect = 9e-48, Method: Composition-based stats. Identities = 114/179 (63%), Positives = 147/179 (82%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANL+A+SK+LGFDIDY KLL+AFR+RA ++RAYYYT ++ D +F Sbjct: 1 MFDPREKIALFIDGANLFAASKSLGFDIDYCKLLEAFRNRAYLLRAYYYTAIIEDL--EF 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG+ VV K AKEFT+ GR+++K +MD+ELA+DA EQS +HLVIFS Sbjct: 59 SSIRPLIDWLDYNGYTVVTKPAKEFTDAQGRRKIKGNMDIELAIDAMEQSRTADHLVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG FTTLV LQRK +KV++VST+ + P M +D+LRRQAD+F+DLA L++EI R P + Sbjct: 119 GDGDFTTLVETLQRKGRKVSVVSTMSTQPPMIADELRRQADHFIDLASLRSEIDRHPRD 177 >gi|307946592|ref|ZP_07661927.1| RtsE [Roseibium sp. TrichSKD4] gi|307770256|gb|EFO29482.1| RtsE [Roseibium sp. TrichSKD4] Length = 194 Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 104/181 (57%), Positives = 146/181 (80%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REK+ALFIDGANLY+++KA+GFDIDY++LLK F+ +A ++RAYYYT ++ D Q++ Sbjct: 1 MFDAREKVALFIDGANLYSTAKAIGFDIDYKRLLKEFQGQAYLLRAYYYTALIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++V+ K KEF ++ GR++VK +MD+ELAVDA +Q E ++H+V+FS Sbjct: 59 SSIRPLIDWLDYNGYKVITKPVKEFVDSTGRRKVKGNMDIELAVDAMQQVEHVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F +LV ALQR+ +KV++VST+ + P M +D LRRQAD+F+DLA L N+I RDP E Sbjct: 119 GDGDFRSLVEALQRRGRKVSVVSTLKTQPPMIADDLRRQADHFIDLASLANKIGRDPSER 178 Query: 181 K 181 Sbjct: 179 P 179 >gi|62289609|ref|YP_221402.1| hypothetical protein BruAb1_0666 [Brucella abortus bv. 1 str. 9-941] gi|82699537|ref|YP_414111.1| hypothetical protein BAB1_0669 [Brucella melitensis biovar Abortus 2308] gi|189023863|ref|YP_001934631.1| hypothetical protein BAbS19_I06260 [Brucella abortus S19] gi|237815104|ref|ZP_04594102.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A] gi|254688926|ref|ZP_05152180.1| hypothetical protein Babob68_01821 [Brucella abortus bv. 6 str. 870] gi|254693408|ref|ZP_05155236.1| hypothetical protein Babob3T_01839 [Brucella abortus bv. 3 str. Tulya] gi|254697060|ref|ZP_05158888.1| hypothetical protein Babob28_04920 [Brucella abortus bv. 2 str. 86/8/59] gi|254729957|ref|ZP_05188535.1| hypothetical protein Babob42_01839 [Brucella abortus bv. 4 str. 292] gi|256257174|ref|ZP_05462710.1| hypothetical protein Babob9C_07408 [Brucella abortus bv. 9 str. C68] gi|260545634|ref|ZP_05821375.1| conserved hypothetical protein [Brucella abortus NCTC 8038] gi|260754412|ref|ZP_05866760.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870] gi|260757631|ref|ZP_05869979.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292] gi|260761458|ref|ZP_05873801.1| conserved hypothetical protein [Brucella abortus bv. 2 str. 86/8/59] gi|260883440|ref|ZP_05895054.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68] gi|261213658|ref|ZP_05927939.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya] gi|297248021|ref|ZP_06931739.1| conserved hypothetical protein [Brucella abortus bv. 5 str. B3196] gi|62195741|gb|AAX74041.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941] gi|82615638|emb|CAJ10625.1| Protein of unknown function DUF88 [Brucella melitensis biovar Abortus 2308] gi|189019435|gb|ACD72157.1| Protein of unknown function DUF88 [Brucella abortus S19] gi|237789941|gb|EEP64151.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A] gi|260097041|gb|EEW80916.1| conserved hypothetical protein [Brucella abortus NCTC 8038] gi|260667949|gb|EEX54889.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292] gi|260671890|gb|EEX58711.1| conserved hypothetical protein [Brucella abortus bv. 2 str. 86/8/59] gi|260674520|gb|EEX61341.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870] gi|260872968|gb|EEX80037.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68] gi|260915265|gb|EEX82126.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya] gi|297175190|gb|EFH34537.1| conserved hypothetical protein [Brucella abortus bv. 5 str. B3196] Length = 191 Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats. Identities = 113/180 (62%), Positives = 146/180 (81%), Gaps = 2/180 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REKIALFIDGANLYA+SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++ Sbjct: 1 MFDSREKIALFIDGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K A+EFT++ GR++VK +MD+EL VDA + ++ ++H VIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKAAREFTDSTGRRKVKGNMDIELTVDAMQLTDTVDHFVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSER 178 >gi|307322278|ref|ZP_07601643.1| protein of unknown function DUF88 [Sinorhizobium meliloti AK83] gi|306892060|gb|EFN22881.1| protein of unknown function DUF88 [Sinorhizobium meliloti AK83] Length = 196 Score = 192 bits (489), Expect = 1e-47, Method: Composition-based stats. Identities = 114/179 (63%), Positives = 147/179 (82%), Gaps = 2/179 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANL+A+SK+LGFDIDY KLL+AFR+RA ++RAYYYT ++ D +F Sbjct: 1 MFDPREKIALFIDGANLFAASKSLGFDIDYCKLLQAFRNRAYLLRAYYYTAIIEDL--EF 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG+ VV K AKEFT+ GR+++K +MD+ELA+DA EQS +HLVIFS Sbjct: 59 SSIRPLIDWLDYNGYTVVTKPAKEFTDAQGRRKIKGNMDIELAIDAMEQSRTADHLVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG FTTLV LQRK +KV++VST+ + P M +D+LRRQAD+F+DLA L++EI R P + Sbjct: 119 GDGDFTTLVETLQRKGRKVSVVSTMSTQPPMIADELRRQADHFIDLASLRSEIDRHPRD 177 >gi|182679399|ref|YP_001833545.1| hypothetical protein Bind_2447 [Beijerinckia indica subsp. indica ATCC 9039] gi|182635282|gb|ACB96056.1| protein of unknown function DUF88 [Beijerinckia indica subsp. indica ATCC 9039] Length = 203 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 101/180 (56%), Positives = 142/180 (78%), Gaps = 3/180 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M P E+IALFIDGANLYA++K+LGFDIDY++LLK F+S+ +IRA+YYT +V D Q++ Sbjct: 1 MSHP-ERIALFIDGANLYATAKSLGFDIDYKRLLKEFQSKGKLIRAFYYTALVED--QEY 57 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG+ VV K KEF ++ GR++VK +MD+ELAVDA E +E L+H+V+FS Sbjct: 58 SSIRPLIDWLDYNGYSVVTKPTKEFVDSLGRRKVKGNMDIELAVDAMEMAEHLDHIVLFS 117 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F +LV A+QRK +V++VST + P+M +D+LRRQAD F+DL +L ++I R+ +E Sbjct: 118 GDGDFRSLVEAVQRKGVRVSVVSTNTTQPAMVADELRRQADEFIDLIHLASKIGREQNER 177 >gi|89053002|ref|YP_508453.1| hypothetical protein Jann_0511 [Jannaschia sp. CCS1] gi|88862551|gb|ABD53428.1| protein of unknown function DUF88 [Jannaschia sp. CCS1] Length = 191 Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats. Identities = 94/174 (54%), Positives = 127/174 (72%), Gaps = 2/174 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDG+NLYA++KALGFDIDY+ L F R ++RA YYT ++ + + Sbjct: 1 MFYRDERLALFIDGSNLYAAAKALGFDIDYKLLRSEFMQRGKLLRANYYTALLEN--DDY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF +V K AKEF ++ GR++VK +MD+ELAVDA E + ++H+VIFS Sbjct: 59 SPIRPLVDWLHYNGFNMVTKPAKEFVDSQGRRKVKGNMDIELAVDAMETAPHVDHIVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 GDG F LV +LQRK +V++VST+ S P M +D LRRQ D F++L LK I Sbjct: 119 GDGDFRPLVESLQRKGCRVSVVSTIRSQPPMIADDLRRQCDNFIELLDLKEAIG 172 >gi|163852608|ref|YP_001640651.1| hypothetical protein Mext_3193 [Methylobacterium extorquens PA1] gi|218531449|ref|YP_002422265.1| hypothetical protein Mchl_3517 [Methylobacterium chloromethanicum CM4] gi|254562365|ref|YP_003069460.1| hypothetical protein METDI3980 [Methylobacterium extorquens DM4] gi|163664213|gb|ABY31580.1| protein of unknown function DUF88 [Methylobacterium extorquens PA1] gi|218523752|gb|ACK84337.1| protein of unknown function DUF88 [Methylobacterium chloromethanicum CM4] gi|254269643|emb|CAX25615.1| conserved hypothethical protein (DUF88) [Methylobacterium extorquens DM4] Length = 218 Score = 192 bits (487), Expect = 2e-47, Method: Composition-based stats. Identities = 98/180 (54%), Positives = 142/180 (78%), Gaps = 3/180 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M D ++ A+FIDGANLYA++KALGFDIDY++LLK F+SR +IRA+YYT ++ D Q++ Sbjct: 1 MSDK-QRTAVFIDGANLYATTKALGFDIDYKRLLKDFQSRDNLIRAFYYTAMIED--QEY 57 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K KEFT++ GR+++K +MD+ELA+DA E + ++H+V+FS Sbjct: 58 SSIRPLIDWLDYNGYRVVTKPVKEFTDSAGRRKIKGNMDIELAIDALELAPHIDHMVLFS 117 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F +LV A+QR+ +V++VST+ + P+M +D LRRQAD F+DLA+L + I RDP E Sbjct: 118 GDGDFRSLVEAIQRRGVRVSVVSTIQTQPAMIADDLRRQADEFIDLAHLASRIGRDPSER 177 >gi|114706254|ref|ZP_01439156.1| hypothetical protein FP2506_00680 [Fulvimarina pelagi HTCC2506] gi|114538115|gb|EAU41237.1| hypothetical protein FP2506_00680 [Fulvimarina pelagi HTCC2506] Length = 199 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 108/180 (60%), Positives = 141/180 (78%), Gaps = 2/180 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REKIALFIDGANLYA+S+ LGFDIDY+K+L F +A ++RAYYYT ++ D Q++ Sbjct: 1 MFDQREKIALFIDGANLYAASRNLGFDIDYKKMLTFFEKKAYLLRAYYYTALIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT+ GR++VK +MD+ELA+DA E S+ ++H V+FS Sbjct: 59 SSIRPLIDWLDYNGYRVVTKPAKEFTDQTGRRKVKGNMDIELAIDAMELSDTVDHFVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F +LV ALQRK +KV++VST+ + P M SD LRRQAD+F+DL LKNEI R E Sbjct: 119 GDGDFRSLVDALQRKGRKVSVVSTLATQPPMISDDLRRQADHFIDLTSLKNEIGRSQAER 178 >gi|153009965|ref|YP_001371180.1| hypothetical protein Oant_2638 [Ochrobactrum anthropi ATCC 49188] gi|151561853|gb|ABS15351.1| protein of unknown function DUF88 [Ochrobactrum anthropi ATCC 49188] Length = 191 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 113/180 (62%), Positives = 145/180 (80%), Gaps = 2/180 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REKIALFIDGANLYA+SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++ Sbjct: 1 MFDSREKIALFIDGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKAAKEFTDSTGRRKVKGNMDIELTVDAMQLTDTVDHFVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F +L ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFRSLAEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSER 178 >gi|299135108|ref|ZP_07028299.1| protein of unknown function DUF88 [Afipia sp. 1NLS2] gi|298590085|gb|EFI50289.1| protein of unknown function DUF88 [Afipia sp. 1NLS2] Length = 212 Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats. Identities = 99/180 (55%), Positives = 137/180 (76%), Gaps = 2/180 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M P KIALFIDGANLYA++K LGFDIDY++LL F++R ++RA+YYT ++ D Q++ Sbjct: 1 MTSPSHKIALFIDGANLYATAKTLGFDIDYKRLLLEFQNRGTLVRAFYYTAIIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++H+V+FS Sbjct: 59 SSIRPLIDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDHMVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F +LV A+QR+ +VT+VST+ S P M +D+LRRQAD F DL L++++ RDP E Sbjct: 119 GDGDFRSLVEAVQRRGVRVTVVSTISSQPPMIADELRRQADVFTDLVQLQSKLGRDPGER 178 >gi|188582630|ref|YP_001926075.1| hypothetical protein Mpop_3389 [Methylobacterium populi BJ001] gi|179346128|gb|ACB81540.1| protein of unknown function DUF88 [Methylobacterium populi BJ001] Length = 217 Score = 191 bits (485), Expect = 3e-47, Method: Composition-based stats. Identities = 99/181 (54%), Positives = 141/181 (77%), Gaps = 3/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M D ++ A+FIDGANLYA++KALGFDIDY++LLK F+SR +IRA+YYT ++ D Q++ Sbjct: 1 MSDK-QRTAVFIDGANLYATTKALGFDIDYKRLLKDFQSRDNLIRAFYYTAMIED--QEY 57 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K KEFT++ GR++VK +MD+ELA+DA E + ++H+V+FS Sbjct: 58 SSIRPLIDWLDYNGYRVVTKPVKEFTDSAGRRKVKGNMDIELAIDALELAPYIDHMVLFS 117 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F +LV A+QR+ +V++VST+ + P+M +D LRRQAD F+DLA+L I RDP E Sbjct: 118 GDGDFRSLVEAIQRRGVRVSVVSTIQTQPAMIADDLRRQADEFIDLAHLAGRIGRDPSER 177 Query: 181 K 181 Sbjct: 178 P 178 >gi|110633298|ref|YP_673506.1| hypothetical protein Meso_0944 [Mesorhizobium sp. BNC1] gi|110284282|gb|ABG62341.1| protein of unknown function DUF88 [Chelativorans sp. BNC1] Length = 194 Score = 191 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 111/181 (61%), Positives = 146/181 (80%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIA+FIDGANLYA+S++LGFDIDYRKLL +F+ RA ++RAYYYT +V D Q++ Sbjct: 1 MFDPREKIAMFIDGANLYATSRSLGFDIDYRKLLASFQKRAYLLRAYYYTALVED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+EL +DA + ++H VIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKPAKEFTDSTGRRKIKGNMDIELTIDALGLVDVVDHYVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F TLV ALQR+ +KV+IVST+ S P M SD+LRRQAD+F+DLA L+ E+ RDP E Sbjct: 119 GDGDFRTLVEALQRRGRKVSIVSTIQSQPPMISDELRRQADHFIDLATLQTEVGRDPSER 178 Query: 181 K 181 Sbjct: 179 P 179 >gi|256159377|ref|ZP_05457159.1| hypothetical protein BcetM4_10523 [Brucella ceti M490/95/1] gi|256254675|ref|ZP_05460211.1| hypothetical protein BcetB_10340 [Brucella ceti B1/94] gi|261221851|ref|ZP_05936132.1| conserved hypothetical protein [Brucella ceti B1/94] gi|265997815|ref|ZP_06110372.1| conserved hypothetical protein [Brucella ceti M490/95/1] gi|260920435|gb|EEX87088.1| conserved hypothetical protein [Brucella ceti B1/94] gi|262552283|gb|EEZ08273.1| conserved hypothetical protein [Brucella ceti M490/95/1] Length = 191 Score = 191 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 112/180 (62%), Positives = 144/180 (80%), Gaps = 2/180 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REKIALFIDGANLYA+SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++ Sbjct: 1 MFDSREKIALFIDGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + P +DWL YNG++V K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS Sbjct: 59 SSIRPFIDWLDYNGYKVGTKAAKEFTDSTGRRKVKGNMDIELTVDAKQLTDTVDHFVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSER 178 >gi|23501536|ref|NP_697663.1| hypothetical protein BR0649 [Brucella suis 1330] gi|161618620|ref|YP_001592507.1| hypothetical protein BCAN_A0662 [Brucella canis ATCC 23365] gi|163842921|ref|YP_001627325.1| hypothetical protein BSUIS_A0677 [Brucella suis ATCC 23445] gi|254703984|ref|ZP_05165812.1| hypothetical protein Bsuib36_08664 [Brucella suis bv. 3 str. 686] gi|260566769|ref|ZP_05837239.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40] gi|261754636|ref|ZP_05998345.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686] gi|23347446|gb|AAN29578.1| conserved hypothetical protein [Brucella suis 1330] gi|161335431|gb|ABX61736.1| Hypothetical protein BCAN_A0662 [Brucella canis ATCC 23365] gi|163673644|gb|ABY37755.1| Hypothetical protein BSUIS_A0677 [Brucella suis ATCC 23445] gi|260156287|gb|EEW91367.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40] gi|261744389|gb|EEY32315.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686] Length = 191 Score = 191 bits (485), Expect = 4e-47, Method: Composition-based stats. Identities = 113/180 (62%), Positives = 146/180 (81%), Gaps = 2/180 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REKIALFI+GANLYA+SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++ Sbjct: 1 MFDSREKIALFINGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKAAKEFTDSTGRRKVKGNMDIELTVDAMQLTDTVDHFVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSER 178 >gi|315122349|ref|YP_004062838.1| hypothetical protein CKC_03005 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495751|gb|ADR52350.1| hypothetical protein CKC_03005 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 205 Score = 191 bits (484), Expect = 4e-47, Method: Composition-based stats. Identities = 149/176 (84%), Positives = 168/176 (95%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYA+SKALGFDIDYRKLLKAF++RA V+RAYYYTTV+GD +QQ+ Sbjct: 1 MFDPREKIALFIDGANLYAASKALGFDIDYRKLLKAFKARARVLRAYYYTTVLGDSDQQY 60 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SPLHPLLDWLHYNGF+VV+KVAKEFTE+CGRK++K+SMDVELAVDAFEQSEG++HLVIFS Sbjct: 61 SPLHPLLDWLHYNGFKVVSKVAKEFTESCGRKKIKASMDVELAVDAFEQSEGIDHLVIFS 120 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 GDG F TLV ALQRK KKVTIVSTVLS+PSM SDQLRRQAD+F+DLAYLKNEI R+ Sbjct: 121 GDGDFATLVEALQRKSKKVTIVSTVLSNPSMVSDQLRRQADHFIDLAYLKNEIQRE 176 >gi|296444871|ref|ZP_06886833.1| protein of unknown function DUF88 [Methylosinus trichosporium OB3b] gi|296257539|gb|EFH04604.1| protein of unknown function DUF88 [Methylosinus trichosporium OB3b] Length = 202 Score = 190 bits (483), Expect = 7e-47, Method: Composition-based stats. Identities = 101/182 (55%), Positives = 143/182 (78%), Gaps = 3/182 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M DP E+IALFIDGANLYA++K+LGFDIDY++LL+ F+SR +IRA+YYT ++ D Q++ Sbjct: 1 MADP-ERIALFIDGANLYATAKSLGFDIDYKRLLREFQSRGRLIRAFYYTALIED--QEY 57 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG+ VV K KEF ++ GR++VK +MD+ELAVDA E +E ++HLV+FS Sbjct: 58 SSIRPLIDWLDYNGYAVVTKPTKEFVDSLGRRKVKGNMDIELAVDAMEMAEHIDHLVLFS 117 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F +LV A+QRK +V+++ST+ + P M +D+LRRQ+D F+DL +L +I RDP E Sbjct: 118 GDGDFRSLVEAVQRKGVRVSVISTITTQPPMIADELRRQSDEFVDLIHLVGKIGRDPGER 177 Query: 181 KK 182 + Sbjct: 178 AE 179 >gi|323137551|ref|ZP_08072628.1| protein of unknown function DUF88 [Methylocystis sp. ATCC 49242] gi|322397177|gb|EFX99701.1| protein of unknown function DUF88 [Methylocystis sp. ATCC 49242] Length = 203 Score = 190 bits (483), Expect = 7e-47, Method: Composition-based stats. Identities = 96/177 (54%), Positives = 140/177 (79%), Gaps = 2/177 (1%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 E+IALFIDGANLYA++K+LGFDIDY++LL+ F+ + +IRA+YYT ++ D Q++S + P Sbjct: 5 ERIALFIDGANLYATAKSLGFDIDYKRLLREFQGKGRLIRAFYYTALIED--QEYSSIRP 62 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 L+DWL YNG+ VV K KEF ++ GR++VK +MD+ELAVDA E +E ++H+V+FSGDG F Sbjct: 63 LIDWLDYNGYAVVTKPTKEFVDSLGRRKVKGNMDIELAVDAMEMAEHIDHMVLFSGDGDF 122 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182 +LV A+QRK +V+++ST+ + P M +D+LRRQAD F+DL +L ++I RDP E + Sbjct: 123 RSLVEAVQRKGVRVSVISTITTQPPMIADELRRQADEFIDLIHLVSKIGRDPGERAE 179 >gi|254713779|ref|ZP_05175590.1| hypothetical protein BcetM6_10570 [Brucella ceti M644/93/1] gi|254717164|ref|ZP_05178975.1| hypothetical protein BcetM_12234 [Brucella ceti M13/05/1] gi|261218981|ref|ZP_05933262.1| conserved hypothetical protein [Brucella ceti M13/05/1] gi|261321520|ref|ZP_05960717.1| conserved hypothetical protein [Brucella ceti M644/93/1] gi|260924070|gb|EEX90638.1| conserved hypothetical protein [Brucella ceti M13/05/1] gi|261294210|gb|EEX97706.1| conserved hypothetical protein [Brucella ceti M644/93/1] Length = 191 Score = 190 bits (483), Expect = 7e-47, Method: Composition-based stats. Identities = 114/180 (63%), Positives = 146/180 (81%), Gaps = 2/180 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REKIALFIDGANLYA+SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++ Sbjct: 1 MFDSREKIALFIDGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKAAKEFTDSTGRRKVKGNMDIELTVDAKQLTDTVDHFVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSER 178 >gi|146341383|ref|YP_001206431.1| hypothetical protein BRADO4470 [Bradyrhizobium sp. ORS278] gi|146194189|emb|CAL78210.1| conserved hypothetical protein with DNA-binding domain (DUF88) [Bradyrhizobium sp. ORS278] Length = 216 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 98/181 (54%), Positives = 136/181 (75%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M KIALFIDGANLYA++K LGFDIDY++LLK F+SR ++RA+YYT ++ D Q++ Sbjct: 1 MSSSTNKIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLLRAFYYTAIIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FS Sbjct: 59 SSIRPLIDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F +LV A+QR+ +VT++ST+ S P M +D+LRRQAD F DL L++++ RDP E Sbjct: 119 GDGDFRSLVEAMQRRGVRVTVISTISSQPPMIADELRRQADVFTDLVELQSKLGRDPSER 178 Query: 181 K 181 Sbjct: 179 P 179 >gi|225627151|ref|ZP_03785189.1| Hypothetical protein, conserved [Brucella ceti str. Cudo] gi|254707641|ref|ZP_05169469.1| hypothetical protein BpinM_11896 [Brucella pinnipedialis M163/99/10] gi|254709777|ref|ZP_05171588.1| hypothetical protein BpinB_05796 [Brucella pinnipedialis B2/94] gi|256031267|ref|ZP_05444881.1| hypothetical protein BpinM2_11548 [Brucella pinnipedialis M292/94/1] gi|260168403|ref|ZP_05755214.1| hypothetical protein BruF5_08553 [Brucella sp. F5/99] gi|261315135|ref|ZP_05954332.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10] gi|261317309|ref|ZP_05956506.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] gi|261757864|ref|ZP_06001573.1| conserved hypothetical protein [Brucella sp. F5/99] gi|265988348|ref|ZP_06100905.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1] gi|225617986|gb|EEH15030.1| Hypothetical protein, conserved [Brucella ceti str. Cudo] gi|261296532|gb|EEY00029.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] gi|261304161|gb|EEY07658.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10] gi|261737848|gb|EEY25844.1| conserved hypothetical protein [Brucella sp. F5/99] gi|264660545|gb|EEZ30806.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1] Length = 191 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 113/180 (62%), Positives = 145/180 (80%), Gaps = 2/180 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REKIALFIDGANLYA+SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++ Sbjct: 1 MFDSREKIALFIDGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++V K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS Sbjct: 59 SSIRPLIDWLDYNGYKVGTKAAKEFTDSTGRRKVKGNMDIELTVDAKQLTDTVDHFVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSER 178 >gi|254701438|ref|ZP_05163266.1| hypothetical protein Bsuib55_11349 [Brucella suis bv. 5 str. 513] gi|261751977|ref|ZP_05995686.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513] gi|261741730|gb|EEY29656.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513] Length = 191 Score = 189 bits (481), Expect = 1e-46, Method: Composition-based stats. Identities = 112/180 (62%), Positives = 145/180 (80%), Gaps = 2/180 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REKIALFI+GANLY +SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++ Sbjct: 1 MFDSREKIALFINGANLYTASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKAAKEFTDSTGRRKVKGNMDLELTVDAMQLTDTVDHFVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSER 178 >gi|312114934|ref|YP_004012530.1| hypothetical protein Rvan_2206 [Rhodomicrobium vannielii ATCC 17100] gi|311220063|gb|ADP71431.1| hypothetical protein Rvan_2206 [Rhodomicrobium vannielii ATCC 17100] Length = 210 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 98/177 (55%), Positives = 136/177 (76%), Gaps = 2/177 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F E+IALFIDGANLYA++KALGFDIDY++LL FR++ +++RA YYT + + Q++S Sbjct: 3 FYTTERIALFIDGANLYATAKALGFDIDYKRLLNLFRNKGVLLRALYYTALAEE--QEYS 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 + PL+DWL YNG+ +V K KEFT+ GR+++K +MD+ELAVDA E SE L+H+++FSG Sbjct: 61 SIRPLIDWLDYNGYSMVTKPTKEFTDASGRRKIKGNMDIELAVDAMELSEHLDHIILFSG 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 DG F TLV ALQ K K+V++VST+ + P M +D+LRRQAD F+DLA L+ +I R Sbjct: 121 DGDFRTLVEALQHKGKRVSVVSTLTTQPPMVADELRRQADQFIDLADLQKDICRTQR 177 >gi|154253305|ref|YP_001414129.1| hypothetical protein Plav_2865 [Parvibaculum lavamentivorans DS-1] gi|154157255|gb|ABS64472.1| protein of unknown function DUF88 [Parvibaculum lavamentivorans DS-1] Length = 206 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 99/181 (54%), Positives = 141/181 (77%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 +F P E+IALFIDGANLY++++ LGFDIDY++LL FRS+ +++RA+YYT ++ D Q++ Sbjct: 2 IFYPNERIALFIDGANLYSAARGLGFDIDYKRLLDHFRSKGVLVRAFYYTALLED--QEY 59 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SPL PL+DWL YNG+ VV K AKEFT+ GR+R+K +MD+ELA+DA E ++ L+HLV+FS Sbjct: 60 SPLRPLIDWLDYNGYAVVTKPAKEFTDATGRRRIKGNMDIELAIDALEIADKLDHLVLFS 119 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F LV A+QRK K+VT+VST+ S P M +D+LRRQAD +++L +++ I R + Sbjct: 120 GDGDFRRLVDAVQRKGKRVTVVSTMRSQPPMIADELRRQADQYVELESMRDAIGRSHSDR 179 Query: 181 K 181 Sbjct: 180 P 180 >gi|90424132|ref|YP_532502.1| hypothetical protein RPC_2633 [Rhodopseudomonas palustris BisB18] gi|90106146|gb|ABD88183.1| protein of unknown function DUF88 [Rhodopseudomonas palustris BisB18] Length = 208 Score = 189 bits (480), Expect = 1e-46, Method: Composition-based stats. Identities = 98/181 (54%), Positives = 136/181 (75%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M KIALFIDGANLYA++K LGFDIDY++LLK F+SR ++RA+YYT ++ D Q++ Sbjct: 1 MSSASSKIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLVRAFYYTAIIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FS Sbjct: 59 SSIRPLIDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F +LV A+QR+ +VT++ST+ S P M +D+LRRQAD F DL L++++ RDP E Sbjct: 119 GDGDFRSLVEAVQRRGVRVTVISTISSQPPMIADELRRQADVFTDLVELQSKLGRDPAER 178 Query: 181 K 181 Sbjct: 179 P 179 >gi|90420856|ref|ZP_01228761.1| conserved hypothetical protein [Aurantimonas manganoxydans SI85-9A1] gi|90334831|gb|EAS48603.1| conserved hypothetical protein [Aurantimonas manganoxydans SI85-9A1] Length = 201 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 109/177 (61%), Positives = 143/177 (80%), Gaps = 2/177 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REKIALFIDGANLYA+S+ LGFDIDY+K+L++F +R ++RAYYYT +V D ++ Sbjct: 1 MFDQREKIALFIDGANLYAASRGLGFDIDYKKMLRSFEARGYLLRAYYYTALVED--NEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K A+EFT+ GR+R+K +MD+ELAVDA E + ++H V+FS Sbjct: 59 SSIRPLIDWLDYNGYRVVTKPAREFTDASGRRRIKGNMDIELAVDAMELVDTVDHFVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 GDG F +LVAALQRK +KV++VST+ S P M SD LRRQAD+F++LA LK EI RDP Sbjct: 119 GDGDFRSLVAALQRKGRKVSVVSTLTSSPPMISDDLRRQADHFIELANLKAEIGRDP 175 >gi|92117780|ref|YP_577509.1| hypothetical protein Nham_2257 [Nitrobacter hamburgensis X14] gi|91800674|gb|ABE63049.1| protein of unknown function DUF88 [Nitrobacter hamburgensis X14] Length = 206 Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats. Identities = 99/180 (55%), Positives = 135/180 (75%), Gaps = 2/180 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M KIALFIDGANLYA++K LGFDIDY++LLK F+SR ++RA+YYT ++ D Q++ Sbjct: 1 MSSASNKIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLVRAFYYTAIIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FS Sbjct: 59 SSIRPLIDWLDYNGYTVVTKATKEFVDASGRRKVKGNMDIELAVDAMELAEHVDQIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F +LV A+QR+ +VT+VST+ S P M +D+LRRQAD F DL L+ ++ RDP E Sbjct: 119 GDGDFRSLVEAVQRRGVRVTVVSTISSQPPMIADELRRQADVFTDLVELQPKLGRDPSER 178 >gi|227820632|ref|YP_002824602.1| hypothetical protein NGR_c00450 [Sinorhizobium fredii NGR234] gi|227339631|gb|ACP23849.1| conserved hypothetical protein [Sinorhizobium fredii NGR234] Length = 191 Score = 189 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 114/182 (62%), Positives = 145/182 (79%), Gaps = 2/182 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REKIALFIDGANLYA+SK+LGFDIDYRKLL AF+ RA ++RAYYYT ++ D +F Sbjct: 1 MFDSREKIALFIDGANLYATSKSLGFDIDYRKLLSAFQKRAYLVRAYYYTALIEDL--EF 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG+ VV K AKEFT+ GR+++K SMDVELA+DA EQ + ++H V+FS Sbjct: 59 SSIRPLIDWLDYNGYTVVTKPAKEFTDALGRRKIKGSMDVELAIDALEQRQVVDHYVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG FTTLVAALQR +KVT+VST+ + P M +D+LRRQAD+F+DL L++EI R P Sbjct: 119 GDGNFTTLVAALQRNGRKVTVVSTLSTQPPMIADELRRQADHFIDLIALRSEIDRHPQAA 178 Query: 181 KK 182 + Sbjct: 179 PQ 180 >gi|17987581|ref|NP_540215.1| putative cytoplasmic protein [Brucella melitensis bv. 1 str. 16M] gi|225852170|ref|YP_002732403.1| hypothetical protein BMEA_A0686 [Brucella melitensis ATCC 23457] gi|256044347|ref|ZP_05447251.1| hypothetical protein Bmelb1R_07603 [Brucella melitensis bv. 1 str. Rev.1] gi|256113190|ref|ZP_05454058.1| hypothetical protein Bmelb3E_10777 [Brucella melitensis bv. 3 str. Ether] gi|256264318|ref|ZP_05466850.1| conserved hypothetical protein [Brucella melitensis bv. 2 str. 63/9] gi|260563699|ref|ZP_05834185.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M] gi|265990761|ref|ZP_06103318.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. Rev.1] gi|265994597|ref|ZP_06107154.1| conserved hypothetical protein [Brucella melitensis bv. 3 str. Ether] gi|17983287|gb|AAL52479.1| hypothetical cytosolic protein [Brucella melitensis bv. 1 str. 16M] gi|225640535|gb|ACO00449.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457] gi|260153715|gb|EEW88807.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M] gi|262765710|gb|EEZ11499.1| conserved hypothetical protein [Brucella melitensis bv. 3 str. Ether] gi|263001545|gb|EEZ14120.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. Rev.1] gi|263094592|gb|EEZ18390.1| conserved hypothetical protein [Brucella melitensis bv. 2 str. 63/9] gi|326408671|gb|ADZ65736.1| putative cytoplasmic protein [Brucella melitensis M28] gi|326538396|gb|ADZ86611.1| conserved hypothetical protein [Brucella melitensis M5-90] Length = 191 Score = 189 bits (479), Expect = 2e-46, Method: Composition-based stats. Identities = 112/180 (62%), Positives = 145/180 (80%), Gaps = 2/180 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REKIALFIDGANLYA+SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++ Sbjct: 1 MFDSREKIALFIDGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K A+EFT++ GR++VK +MD+EL VDA + ++ ++H VIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKAAREFTDSTGRRKVKGNMDIELTVDAMQLTDTVDHFVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 G G F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E Sbjct: 119 GYGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSER 178 >gi|294852014|ref|ZP_06792687.1| hypothetical protein BAZG_00929 [Brucella sp. NVSL 07-0026] gi|294820603|gb|EFG37602.1| hypothetical protein BAZG_00929 [Brucella sp. NVSL 07-0026] Length = 191 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 112/180 (62%), Positives = 144/180 (80%), Gaps = 2/180 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF REKIALFID ANLYA+SK LGFDIDYRKLLKAF+ R ++RAYYYT +V D Q++ Sbjct: 1 MFGSREKIALFIDDANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS Sbjct: 59 SSIRPLIDWLDYNGYKVVTKAAKEFTDSTGRRKVKGNMDIELTVDAMQLTDTVDHFVIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL LK EI RDP E Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSER 178 >gi|75676115|ref|YP_318536.1| hypothetical protein Nwi_1924 [Nitrobacter winogradskyi Nb-255] gi|74420985|gb|ABA05184.1| Protein of unknown function DUF88 [Nitrobacter winogradskyi Nb-255] Length = 205 Score = 188 bits (478), Expect = 2e-46, Method: Composition-based stats. Identities = 99/181 (54%), Positives = 136/181 (75%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M KIALFIDGANLYA++K LGFDIDY++LLK F+SR ++RA+YYT ++ D Q++ Sbjct: 1 MPSASNKIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLVRAFYYTAIIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FS Sbjct: 59 SSIRPLIDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHVDQIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F +LV A+QR+ +VT+VST+ S P M +D+LRRQAD F DL L+ ++ RDP E Sbjct: 119 GDGDFRSLVEAVQRRGVRVTVVSTIASQPPMIADELRRQADVFTDLVELQPKLGRDPSER 178 Query: 181 K 181 + Sbjct: 179 Q 179 >gi|154247759|ref|YP_001418717.1| hypothetical protein Xaut_3836 [Xanthobacter autotrophicus Py2] gi|154161844|gb|ABS69060.1| protein of unknown function DUF88 [Xanthobacter autotrophicus Py2] Length = 202 Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats. Identities = 101/176 (57%), Positives = 142/176 (80%), Gaps = 2/176 (1%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 EKIAL IDGANLY+++KALGFDIDY++LLK F+SR ++RA+YYTT++ D Q++S + P Sbjct: 5 EKIALLIDGANLYSATKALGFDIDYKRLLKEFQSRGYLLRAFYYTTLIED--QEYSSIRP 62 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 LLDWL YNG+ VV K+A+EFT++ GR+RV+ +MD+E+AVDA E +E ++H+V+FSGDG F Sbjct: 63 LLDWLDYNGYAVVTKLAREFTDSQGRRRVRGNMDIEIAVDAMELAEHVDHIVLFSGDGDF 122 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 +LV ALQRK +V++VST+ + P + +D LRRQAD F+DL L+ +I RDP E + Sbjct: 123 RSLVEALQRKGVRVSVVSTISTQPPLIADDLRRQADVFIDLVDLQPKIGRDPSERQ 178 >gi|85715063|ref|ZP_01046047.1| hypothetical protein NB311A_00725 [Nitrobacter sp. Nb-311A] gi|85697978|gb|EAQ35851.1| hypothetical protein NB311A_00725 [Nitrobacter sp. Nb-311A] Length = 205 Score = 188 bits (477), Expect = 3e-46, Method: Composition-based stats. Identities = 99/181 (54%), Positives = 136/181 (75%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M KIALFIDGANLYA++K LGFDIDY++LLK F+SR ++RA+YYT ++ D Q++ Sbjct: 1 MPSASNKIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLVRAFYYTAIIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FS Sbjct: 59 SSIRPLIDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHVDQIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F +LV A+QR+ +VT+VST+ S P M +D+LRRQAD F DL L+ ++ RDP E Sbjct: 119 GDGDFRSLVEAVQRRGVRVTVVSTIASQPPMIADELRRQADVFTDLVELQPKLGRDPSER 178 Query: 181 K 181 + Sbjct: 179 Q 179 >gi|114770098|ref|ZP_01447636.1| hypothetical protein OM2255_10695 [alpha proteobacterium HTCC2255] gi|114548935|gb|EAU51818.1| hypothetical protein OM2255_10695 [alpha proteobacterium HTCC2255] Length = 174 Score = 188 bits (477), Expect = 3e-46, Method: Composition-based stats. Identities = 91/176 (51%), Positives = 132/176 (75%), Gaps = 2/176 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M E+ ALFIDG+NL+AS+KAL +IDY+KL F R ++RAYYYT ++ + E Sbjct: 1 MNYSDERTALFIDGSNLHASAKALNLEIDYKKLKNEFIKRGKLLRAYYYTALIENEEN-- 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SPL PL+DWL YNG+ +V+K AKEFT++ G+KR+K +MD+ELA+DA E + +EH++IFS Sbjct: 59 SPLRPLVDWLTYNGYTIVSKPAKEFTDSAGQKRIKGNMDIELAIDAMELAPNVEHIIIFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 GDG F +LV +LQR+ +V++VST S P M +D+LRRQAD ++DL L++ I+++ Sbjct: 119 GDGDFQSLVKSLQRQGVRVSVVSTTRSHPPMIADELRRQADNYIDLEELRDVISQN 174 >gi|27380178|ref|NP_771707.1| hypothetical protein blr5067 [Bradyrhizobium japonicum USDA 110] gi|27353332|dbj|BAC50332.1| blr5067 [Bradyrhizobium japonicum USDA 110] Length = 214 Score = 188 bits (477), Expect = 3e-46, Method: Composition-based stats. Identities = 99/178 (55%), Positives = 136/178 (76%), Gaps = 2/178 (1%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 P KIALFIDGANLYA++K LGFDIDY++LLK F+SR ++RA+YYT ++ D Q++S + Sbjct: 5 PTNKIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLLRAFYYTAIIED--QEYSSI 62 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 PL+DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FSGDG Sbjct: 63 RPLIDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFSGDG 122 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 F +LV A+QR+ +VT+VST+ S P M +D+LRRQAD F DL L++++ RDP E Sbjct: 123 DFRSLVEAVQRRGVRVTVVSTIASQPPMIADELRRQADVFTDLVELQSKLGRDPSERP 180 >gi|310815107|ref|YP_003963071.1| hypothetical protein EIO_0609 [Ketogulonicigenium vulgare Y25] gi|308753842|gb|ADO41771.1| conserved hypothetical protein [Ketogulonicigenium vulgare Y25] Length = 196 Score = 188 bits (477), Expect = 4e-46, Method: Composition-based stats. Identities = 95/182 (52%), Positives = 134/182 (73%), Gaps = 2/182 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E+IALFIDGANLYA+SK+LGFDIDY+ L F R +IRA+YYT ++ + +++ Sbjct: 1 MFYRDERIALFIDGANLYAASKSLGFDIDYKLLRSEFMRRGRLIRAFYYTALLEN--EEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWLHYNGF + K AKEF + GR+++K +MD+EL VDA E + ++H+V+FS Sbjct: 59 SPIRPLVDWLHYNGFSMRTKPAKEFQDAQGRRKIKGNMDIELTVDAMELAPHVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F L+ ALQR+ +V++VSTV S P M +D+LRRQAD F++L L++ + R P D Sbjct: 119 GDGDFRPLIEALQRRGVRVSVVSTVRSQPPMIADELRRQADNFIELDELRDVLGRPPRPD 178 Query: 181 KK 182 + Sbjct: 179 AR 180 >gi|288958017|ref|YP_003448358.1| hypothetical protein AZL_011760 [Azospirillum sp. B510] gi|288910325|dbj|BAI71814.1| hypothetical protein AZL_011760 [Azospirillum sp. B510] Length = 200 Score = 188 bits (477), Expect = 4e-46, Method: Composition-based stats. Identities = 90/177 (50%), Positives = 130/177 (73%), Gaps = 2/177 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E++ALFIDGANLYA++++LGFDIDY++L F ++RA+YYT +V D Q++ Sbjct: 1 MFYKEERLALFIDGANLYAAARSLGFDIDYKRLRDGFAGEGRLVRAFYYTALVED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWL YNG+ +V K KEFT+ GR+++K +MD+ELA+D E ++ ++H+++FS Sbjct: 59 SPIRPLVDWLDYNGYTMVTKPTKEFTDASGRRKIKGNMDIELAIDVMEMADHVDHILLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 GDG F LV A+QRK + ++VSTV S P M +D+LRRQAD F++L L IAR Sbjct: 119 GDGDFRRLVEAVQRKGVRFSVVSTVRSQPPMVADELRRQADNFIELQELAPFIARTH 175 >gi|328543520|ref|YP_004303629.1| RtsE [polymorphum gilvum SL003B-26A1] gi|326413264|gb|ADZ70327.1| RtsE [Polymorphum gilvum SL003B-26A1] Length = 195 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 100/181 (55%), Positives = 141/181 (77%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REKIALFIDGANLY+++KA+GFDIDY+ LLK F+ + ++RAYYYT ++ D Q++ Sbjct: 1 MFDSREKIALFIDGANLYSTAKAIGFDIDYKMLLKEFQGKGYLLRAYYYTAIIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++V+ K KEF + GR++VK +MD+ELAVDA + + ++H+V+FS Sbjct: 59 SSIRPLIDWLDYNGYKVITKPVKEFVDASGRRKVKGNMDIELAVDAMQIVDHVDHIVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F +LV ALQRK +KV++VST+ + P M +D LRRQAD+F+DLA L ++ RDP + Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLQTQPPMIADDLRRQADHFIDLATLAAKVGRDPADR 178 Query: 181 K 181 Sbjct: 179 P 179 >gi|148256038|ref|YP_001240623.1| hypothetical protein BBta_4689 [Bradyrhizobium sp. BTAi1] gi|146408211|gb|ABQ36717.1| hypothetical protein BBta_4689 [Bradyrhizobium sp. BTAi1] Length = 217 Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats. Identities = 98/181 (54%), Positives = 136/181 (75%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M KIALFIDGANLYA++K LGFDIDY++LLK F+SR ++RA+YYT ++ D Q++ Sbjct: 1 MSSSTNKIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLLRAFYYTAIIED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FS Sbjct: 59 SSIRPLIDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F +LV A+QR+ +VT++ST+ S P M +D+LRRQAD F DL L++++ RDP E Sbjct: 119 GDGDFRSLVEAMQRRGVRVTVISTISSQPPMIADELRRQADVFTDLVELQSKLGRDPSER 178 Query: 181 K 181 Sbjct: 179 P 179 >gi|158422876|ref|YP_001524168.1| hypothetical protein AZC_1252 [Azorhizobium caulinodans ORS 571] gi|158329765|dbj|BAF87250.1| uncharacterized conserved protein [Azorhizobium caulinodans ORS 571] Length = 201 Score = 187 bits (475), Expect = 5e-46, Method: Composition-based stats. Identities = 104/176 (59%), Positives = 141/176 (80%), Gaps = 2/176 (1%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 EKIALFIDGANLY+++KALGFDIDY++LLK F+SR ++RA+YYTT+V D Q++S + Sbjct: 4 MEKIALFIDGANLYSATKALGFDIDYKRLLKEFQSRGYLLRAFYYTTLVED--QEYSSIR 61 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 PLLDWL YNG+ VV K+A+EFT++ GR+RV+ +MD+E+AVDA E + L+H+V+FSGDG Sbjct: 62 PLLDWLDYNGYSVVTKLAREFTDSQGRRRVRGNMDIEIAVDAMELAGSLDHIVLFSGDGD 121 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 F +LV ALQRK +V++VST+ + P + SD LRRQAD F+DL L+ +I RDP E Sbjct: 122 FRSLVEALQRKGVRVSVVSTISTQPPLISDDLRRQADVFIDLVDLQAKIGRDPAER 177 >gi|115525034|ref|YP_781945.1| hypothetical protein RPE_3028 [Rhodopseudomonas palustris BisA53] gi|115518981|gb|ABJ06965.1| protein of unknown function DUF88 [Rhodopseudomonas palustris BisA53] Length = 209 Score = 187 bits (475), Expect = 6e-46, Method: Composition-based stats. Identities = 97/175 (55%), Positives = 135/175 (77%), Gaps = 2/175 (1%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 KIALFIDGANLYA++K LGFDIDY++LLK F+SR ++RA+YYT ++ D Q++S + PL Sbjct: 6 KIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLVRAFYYTAIIED--QEYSSIRPL 63 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126 +DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FSGDG F Sbjct: 64 IDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHVDQIVLFSGDGDFR 123 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 +LV A+QR+ +VT++ST+ S P M +D+LRRQAD F DL L++++ RDP E Sbjct: 124 SLVEAVQRRGVRVTVISTISSQPPMIADELRRQADVFTDLVELQSKLGRDPAERP 178 >gi|254780936|ref|YP_003065349.1| hypothetical protein CLIBASIA_04175 [Candidatus Liberibacter asiaticus str. psy62] gi|254040613|gb|ACT57409.1| hypothetical protein CLIBASIA_04175 [Candidatus Liberibacter asiaticus str. psy62] Length = 182 Score = 186 bits (473), Expect = 9e-46, Method: Composition-based stats. Identities = 182/182 (100%), Positives = 182/182 (100%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF Sbjct: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS Sbjct: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED Sbjct: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 Query: 181 KK 182 KK Sbjct: 181 KK 182 >gi|163793037|ref|ZP_02187013.1| hypothetical protein BAL199_24649 [alpha proteobacterium BAL199] gi|159181683|gb|EDP66195.1| hypothetical protein BAL199_24649 [alpha proteobacterium BAL199] Length = 218 Score = 185 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 98/174 (56%), Positives = 136/174 (78%), Gaps = 2/174 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F P EK+ALFIDGANLY++++ALGFDIDY++LL F S+A +IRA+YYT ++ D Q++S Sbjct: 3 FYPHEKVALFIDGANLYSAARALGFDIDYKRLLVLFGSKANLIRAFYYTALLED--QEYS 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 P+ PL+DWL YNG+ +V K AKEFT++ GR+R+K +MD+ELAVD E + L+H+V+FSG Sbjct: 61 PIRPLVDWLDYNGYSLVTKPAKEFTDSQGRRRIKGNMDIELAVDMMEMVDRLDHVVLFSG 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 DG F +L+ A+QRK + T+VST+ S P M +D+LRRQAD F+DL L +I R Sbjct: 121 DGDFRSLIEAVQRKGVRATVVSTIRSSPPMIADELRRQADQFIDLDQLAGDIER 174 >gi|217977184|ref|YP_002361331.1| protein of unknown function DUF88 [Methylocella silvestris BL2] gi|217502560|gb|ACK49969.1| protein of unknown function DUF88 [Methylocella silvestris BL2] Length = 205 Score = 185 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 101/182 (55%), Positives = 143/182 (78%), Gaps = 3/182 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M D +E+IALFIDGANLYA++K+LGFDIDY++LLK F+SR +IRA+YYT +V D Q++ Sbjct: 1 MAD-QERIALFIDGANLYATAKSLGFDIDYKRLLKEFQSRGKLIRAFYYTALVED--QEY 57 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG+ VV K KEF ++ GR++VK +MD+ELAVDA E +E L+H+V+FS Sbjct: 58 SSIRPLVDWLDYNGYSVVTKPTKEFVDSLGRRKVKGNMDIELAVDAMEMAEHLDHIVLFS 117 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F +LV A+QRK +V++VST + P+M +D+LRRQAD F+D+ +L ++I RD + Sbjct: 118 GDGDFRSLVEAIQRKGVRVSVVSTNATQPAMVADELRRQADEFIDIIHLASKIGRDAGDR 177 Query: 181 KK 182 + Sbjct: 178 PE 179 >gi|86749724|ref|YP_486220.1| hypothetical protein RPB_2606 [Rhodopseudomonas palustris HaA2] gi|86572752|gb|ABD07309.1| Protein of unknown function DUF88 [Rhodopseudomonas palustris HaA2] Length = 209 Score = 185 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 98/175 (56%), Positives = 134/175 (76%), Gaps = 2/175 (1%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 KIALFIDGANLYA++K LGFDIDY++LLK F SR +IRA+YYT ++ D Q++S + PL Sbjct: 8 KIALFIDGANLYATAKTLGFDIDYKRLLKEFHSRGTLIRAFYYTAIIED--QEYSSIRPL 65 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126 +DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FSGDG F Sbjct: 66 IDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFSGDGDFR 125 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 +LV A+QR+ +VT++ST+ S P M +D+LRRQAD F DL L+++I RDP + Sbjct: 126 SLVEAVQRRGVRVTVISTISSQPPMIADELRRQADVFTDLVELQSKIGRDPADRP 180 >gi|220920088|ref|YP_002495389.1| hypothetical protein Mnod_0035 [Methylobacterium nodulans ORS 2060] gi|219944694|gb|ACL55086.1| protein of unknown function DUF88 [Methylobacterium nodulans ORS 2060] Length = 219 Score = 185 bits (469), Expect = 3e-45, Method: Composition-based stats. Identities = 98/181 (54%), Positives = 136/181 (75%), Gaps = 4/181 (2%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M ++ ALFIDGAN+YA++KALGFDIDYRKLL F++R +IRA+YYT +V D Q++ Sbjct: 1 MTY--QRSALFIDGANVYATTKALGFDIDYRKLLADFKARENLIRAFYYTALVED--QEY 56 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+EL +DA E S ++H+V+FS Sbjct: 57 SSIRPLIDWLDYNGYRVVTKPAKEFTDSSGRRKVKGNMDIELTIDALELSPYIDHMVLFS 116 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F LVAA+QR+ +VT+VST+ + P M +D LRRQAD F+D+ +L I RD + Sbjct: 117 GDGDFKPLVAAMQRRGVRVTVVSTIQTQPPMVADDLRRQADDFVDIVHLIPRIGRDQSDR 176 Query: 181 K 181 Sbjct: 177 P 177 >gi|16125797|ref|NP_420361.1| hypothetical protein CC_1550 [Caulobacter crescentus CB15] gi|221234556|ref|YP_002516992.1| cytosolic protein [Caulobacter crescentus NA1000] gi|13422935|gb|AAK23529.1| conserved hypothetical protein [Caulobacter crescentus CB15] gi|220963728|gb|ACL95084.1| hypothetical cytosolic protein [Caulobacter crescentus NA1000] Length = 198 Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats. Identities = 101/181 (55%), Positives = 133/181 (73%), Gaps = 2/181 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F P +++ALFIDGANLY+++KALGFDIDYRKLL F+ R ++IRAYYYT + + +S Sbjct: 3 FYPTDRLALFIDGANLYSAAKALGFDIDYRKLLDEFKKRGVLIRAYYYTAIAEN--DDYS 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 P+ PL+DWL YNGF +V K A+EFT++ GRKR + MD+E+AVD + +E +HLV+FSG Sbjct: 61 PIRPLVDWLDYNGFTLVTKPAREFTDSQGRKRWRGDMDIEIAVDMLQIAETADHLVLFSG 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 DG F LV A+QRK ++VT+VST+ S P M SD LRRQAD F+DLA L N I R Sbjct: 121 DGDFRALVEAVQRKGRRVTVVSTMKSQPPMTSDDLRRQADNFVDLADLGNIIGRPQRTPP 180 Query: 182 K 182 + Sbjct: 181 R 181 >gi|39935757|ref|NP_948033.1| hypothetical protein RPA2691 [Rhodopseudomonas palustris CGA009] gi|192291344|ref|YP_001991949.1| hypothetical protein Rpal_2966 [Rhodopseudomonas palustris TIE-1] gi|39649610|emb|CAE28132.1| DUF88 [Rhodopseudomonas palustris CGA009] gi|192285093|gb|ACF01474.1| protein of unknown function DUF88 [Rhodopseudomonas palustris TIE-1] Length = 216 Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats. Identities = 97/173 (56%), Positives = 135/173 (78%), Gaps = 2/173 (1%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 KIALFIDGANLYA++K LGFDIDY++LLK F+SR ++RA+YYT ++ D Q++S + PL Sbjct: 8 KIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGNLVRAFYYTAIIED--QEYSSIRPL 65 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126 +DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FSGDG F Sbjct: 66 IDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFSGDGDFR 125 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 +LV A+QR+ +VT++ST+ S P M +D+LRRQAD F DL L+++I RDP + Sbjct: 126 SLVEAVQRRGVRVTVISTISSQPPMIADELRRQADIFTDLVELQSKIGRDPAD 178 >gi|316934150|ref|YP_004109132.1| hypothetical protein Rpdx1_2816 [Rhodopseudomonas palustris DX-1] gi|315601864|gb|ADU44399.1| hypothetical protein Rpdx1_2816 [Rhodopseudomonas palustris DX-1] Length = 213 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 96/173 (55%), Positives = 134/173 (77%), Gaps = 2/173 (1%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 KIALFIDGANLYA++K LGFDIDY++LLK F+ R ++RA+YYT ++ D Q++S + PL Sbjct: 8 KIALFIDGANLYATAKTLGFDIDYKRLLKEFQGRGNLVRAFYYTAIIED--QEYSSIRPL 65 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126 +DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FSGDG F Sbjct: 66 IDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFSGDGDFR 125 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 +LV A+QR+ +VT++ST+ S P M +D+LRRQAD F DL L+++I RDP + Sbjct: 126 SLVEAVQRRGVRVTVISTISSQPPMIADELRRQADIFTDLVELQSKIGRDPAD 178 >gi|209964804|ref|YP_002297719.1| hypothetical protein RC1_1502 [Rhodospirillum centenum SW] gi|209958270|gb|ACI98906.1| conserved hypothetical protein [Rhodospirillum centenum SW] Length = 233 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 90/178 (50%), Positives = 133/178 (74%), Gaps = 2/178 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 +F E++A+FIDGANLYA++++LGFDIDY++LL+ F R ++RA+YYT +V D Q++ Sbjct: 5 IFYQEERLAMFIDGANLYAAARSLGFDIDYKRLLELFAGRGRLVRAFYYTALVED--QEY 62 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWL YNG+ +V K KE+T+ GR+++K +MD+ELA+D E +E ++H+++FS Sbjct: 63 SPIRPLVDWLDYNGYTMVTKPTKEYTDASGRRKIKGNMDIELAIDVMEMAEHVDHILLFS 122 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 GDG F LV A+QRK +VT++STV S P M +D+LRRQAD F++L L I R Sbjct: 123 GDGDFRRLVEAVQRKGVRVTVISTVRSTPPMVADELRRQADNFLELQDLSPNIMRTHS 180 >gi|91977116|ref|YP_569775.1| hypothetical protein RPD_2645 [Rhodopseudomonas palustris BisB5] gi|91683572|gb|ABE39874.1| protein of unknown function DUF88 [Rhodopseudomonas palustris BisB5] Length = 228 Score = 184 bits (468), Expect = 4e-45, Method: Composition-based stats. Identities = 98/175 (56%), Positives = 135/175 (77%), Gaps = 2/175 (1%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 KIALFIDGANLYA++K LGFDIDY++LLK F+SR +IRA+YYT ++ D Q++S + PL Sbjct: 27 KIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLIRAFYYTAIIED--QEYSSIRPL 84 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126 +DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FSGDG F Sbjct: 85 IDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFSGDGDFR 144 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 +LV A+QR+ +VT++ST+ S P M +D+LRRQAD F DL L+++I RDP + Sbjct: 145 SLVEAVQRRGVRVTVISTISSQPPMIADELRRQADTFTDLVELQSKIGRDPADRP 199 >gi|304392073|ref|ZP_07374015.1| hypothetical protein R2A130_0742 [Ahrensia sp. R2A130] gi|303296302|gb|EFL90660.1| hypothetical protein R2A130_0742 [Ahrensia sp. R2A130] Length = 199 Score = 184 bits (467), Expect = 5e-45, Method: Composition-based stats. Identities = 105/175 (60%), Positives = 139/175 (79%), Gaps = 2/175 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REKIAL IDGANLYA+S+ALGFDIDYR++L AF+ R V+RAYYYT +V D Q++ Sbjct: 1 MFDEREKIALMIDGANLYATSRALGFDIDYRQMLVAFQKRGYVLRAYYYTALVED--QEY 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG++V+ K AKEFT+ GR++VK +MD+ELAVDA + ++ ++H V+FS Sbjct: 59 SAIRPLIDWLDYNGYRVITKPAKEFTDASGRRKVKGNMDIELAVDALDLADTVDHFVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 GDG F LV +LQRK ++VT+VST S P M +D+LRRQAD F+DL L++EI R Sbjct: 119 GDGDFRALVESLQRKGRRVTVVSTTSSQPPMIADELRRQADVFIDLKSLQDEIGR 173 >gi|298291613|ref|YP_003693552.1| hypothetical protein Snov_1628 [Starkeya novella DSM 506] gi|296928124|gb|ADH88933.1| protein of unknown function DUF88 [Starkeya novella DSM 506] Length = 203 Score = 184 bits (466), Expect = 5e-45, Method: Composition-based stats. Identities = 98/176 (55%), Positives = 138/176 (78%), Gaps = 2/176 (1%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 EKIALFIDGANLY+++K+LGFDIDY++LLK F+ R V+RA+YYTT+V D ++S + Sbjct: 1 MEKIALFIDGANLYSATKSLGFDIDYKRLLKEFQGRGYVLRAFYYTTLVED--SEYSSIR 58 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 PLLDWL YNG+ VV K A+EFT++ GR+RV+ +MD+ELAV+A E + ++H+V+FSGDG Sbjct: 59 PLLDWLDYNGYSVVTKPAREFTDSQGRRRVRGNMDIELAVNAMELAGHVDHIVLFSGDGD 118 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 F +LV A+QRK +VT+VS++ + P M +D+LRRQAD F+DL L+ + RDP + Sbjct: 119 FRSLVEAIQRKGVRVTVVSSIHTQPPMIADELRRQADVFLDLVDLQGRVGRDPADR 174 >gi|170738400|ref|YP_001767055.1| hypothetical protein M446_0033 [Methylobacterium sp. 4-46] gi|168192674|gb|ACA14621.1| protein of unknown function DUF88 [Methylobacterium sp. 4-46] Length = 216 Score = 184 bits (466), Expect = 6e-45, Method: Composition-based stats. Identities = 98/176 (55%), Positives = 135/176 (76%), Gaps = 2/176 (1%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 ++ ALFIDGAN+YA++KALGFDIDYRKLL FRSR +IRA+YYT ++ D Q++S + P Sbjct: 4 QRSALFIDGANVYATTKALGFDIDYRKLLADFRSRENLIRAFYYTALIED--QEYSSIRP 61 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 L+DWL YNG++VV K AKEFT++ GR+++K +MD+EL +DA E S ++H+V+FSGDG F Sbjct: 62 LIDWLDYNGYRVVTKPAKEFTDSTGRRKIKGNMDIELTIDALELSPYIDHMVLFSGDGDF 121 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 LVAA+QR+ +VT+VST+ + P M SD LRRQAD F+D+ +L I RD + Sbjct: 122 KPLVAAMQRRGVRVTVVSTIQTQPPMVSDDLRRQADDFVDIVHLIPRIGRDQSDRP 177 >gi|167645687|ref|YP_001683350.1| hypothetical protein Caul_1723 [Caulobacter sp. K31] gi|167348117|gb|ABZ70852.1| protein of unknown function DUF88 [Caulobacter sp. K31] Length = 207 Score = 184 bits (466), Expect = 6e-45, Method: Composition-based stats. Identities = 98/177 (55%), Positives = 133/177 (75%), Gaps = 2/177 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F P E++ALFIDGAN ++++K+LGFDIDYRKLL FR R +++RAYYYT + + +++S Sbjct: 3 FYPTERLALFIDGANFFSAAKSLGFDIDYRKLLDEFRKRGLLVRAYYYTAIAEN--EEYS 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 P+ PL+DWL YNGF +V K A+EFT++ GRKR + MD+E+AVD E + ++HLV+FSG Sbjct: 61 PIRPLVDWLDYNGFTLVTKPAREFTDSQGRKRWRGDMDIEIAVDMLEMAATVDHLVLFSG 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 DG F V A+QRK ++VT+VST+ S P MASD LRRQAD F+DLA L + I R Sbjct: 121 DGDFRAAVEAVQRKGRRVTVVSTMKSQPPMASDDLRRQADNFVDLADLGSIIGRPQA 177 >gi|209884968|ref|YP_002288825.1| DUF88 [Oligotropha carboxidovorans OM5] gi|209873164|gb|ACI92960.1| DUF88 [Oligotropha carboxidovorans OM5] Length = 213 Score = 184 bits (466), Expect = 7e-45, Method: Composition-based stats. Identities = 98/176 (55%), Positives = 135/176 (76%), Gaps = 2/176 (1%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 KIALFIDGANLYA++K LGFDIDY++LL F+SR ++RA+YYT ++ D Q++S + PL Sbjct: 8 KIALFIDGANLYATAKTLGFDIDYKRLLLEFQSRGSLVRAFYYTAIIED--QEYSSIRPL 65 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126 +DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FSGDG F Sbjct: 66 IDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFSGDGDFR 125 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182 +LV A+QR+ +VT+VST+ S P M +D+LRRQAD F DL L+++I RDP E + Sbjct: 126 SLVEAVQRRGVRVTVVSTIASQPPMIADELRRQADVFTDLVQLQSKIGRDPGERTQ 181 >gi|254418577|ref|ZP_05032301.1| conserved hypothetical protein [Brevundimonas sp. BAL3] gi|196184754|gb|EDX79730.1| conserved hypothetical protein [Brevundimonas sp. BAL3] Length = 180 Score = 183 bits (465), Expect = 7e-45, Method: Composition-based stats. Identities = 86/178 (48%), Positives = 122/178 (68%), Gaps = 2/178 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF +++A+FIDG+NLY++++AL D+D++++L FR ++I+ RAYYYT VV ++F Sbjct: 1 MFHSTDRLAIFIDGSNLYSAARALQHDMDFKRMLDWFREKSILTRAYYYTAVVEG--EEF 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 SP+ PL+DWL YNGF VV K K FT+ G R+K +MD+E+AVD E + L+H V+FS Sbjct: 59 SPVKPLVDWLDYNGFSVVTKPVKRFTDGQGHSRIKGNMDIEIAVDMLELAPRLDHAVLFS 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 GDG F LV A+Q +VT+VST + P +D+LRRQAD F+DL L E R Sbjct: 119 GDGDFRRLVQAVQALGVRVTVVSTQKTQPPHIADELRRQADAFLDLNDLMAEFCRPKT 176 >gi|118587968|ref|ZP_01545378.1| hypothetical protein SIAM614_10343 [Stappia aggregata IAM 12614] gi|118439590|gb|EAV46221.1| hypothetical protein SIAM614_10343 [Stappia aggregata IAM 12614] Length = 188 Score = 183 bits (465), Expect = 8e-45, Method: Composition-based stats. Identities = 97/171 (56%), Positives = 136/171 (79%), Gaps = 2/171 (1%) Query: 11 FIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWL 70 FIDGANLY+++KA+GFDIDY++LLK F+ +A ++RAYYYT ++ D Q++S + PL+DWL Sbjct: 2 FIDGANLYSTAKAIGFDIDYKRLLKEFQGQAYLLRAYYYTALIED--QEYSSIRPLIDWL 59 Query: 71 HYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVA 130 YNG++V+ K KEF ++ GR++VK +MD+ELAVDA E E ++H+V+FSGDG F +LV Sbjct: 60 DYNGYKVITKPVKEFVDSAGRRKVKGNMDIELAVDAMELVESVDHVVLFSGDGDFRSLVE 119 Query: 131 ALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 ALQRK +KV++VST+ + P M +D LRRQAD+F+DLA L N+I RDP E Sbjct: 120 ALQRKGRKVSVVSTLKTQPPMIADDLRRQADHFIDLASLANKIGRDPSERP 170 >gi|295690031|ref|YP_003593724.1| hypothetical protein Cseg_2656 [Caulobacter segnis ATCC 21756] gi|295431934|gb|ADG11106.1| protein of unknown function DUF88 [Caulobacter segnis ATCC 21756] Length = 198 Score = 183 bits (465), Expect = 8e-45, Method: Composition-based stats. Identities = 101/181 (55%), Positives = 132/181 (72%), Gaps = 2/181 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F P ++IALFIDGANLY+++KALGFDIDYRKLL F+ R ++IRAYYYT + + +S Sbjct: 3 FYPTDRIALFIDGANLYSAAKALGFDIDYRKLLDEFKKRGVLIRAYYYTAIAEN--DDYS 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 P+ PL+DWL YNGF +V K A+EFT++ GRKR + MD+E+AVD + +E +HLV+FSG Sbjct: 61 PIRPLVDWLDYNGFTLVTKPAREFTDSQGRKRWRGDMDIEIAVDMLQMAETADHLVLFSG 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 DG F LV A+QRK ++VT+VST+ S P M SD LRRQAD F+DLA L I R Sbjct: 121 DGDFRALVEAVQRKGRRVTVVSTMKSQPPMTSDDLRRQADNFVDLADLGGIIGRPQRVQS 180 Query: 182 K 182 + Sbjct: 181 R 181 >gi|114327650|ref|YP_744807.1| putative cytoplasmic protein [Granulibacter bethesdensis CGDNIH1] gi|114315824|gb|ABI61884.1| hypothetical cytosolic protein [Granulibacter bethesdensis CGDNIH1] Length = 195 Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats. Identities = 91/180 (50%), Positives = 132/180 (73%), Gaps = 2/180 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F P E+IALFIDGANLY++S+ LGF++DYR LL FRSR+ ++RAYYY+ V+ +++S Sbjct: 3 FLPTERIALFIDGANLYSASRNLGFEVDYRNLLSTFRSRSQLVRAYYYSAVLET--EEYS 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 PL PL DWL YNG+ +V K A+EFT++ GR+R+K +MD+ELAVD E ++ ++H V+FSG Sbjct: 61 PLKPLTDWLAYNGYNLVTKPAREFTDSSGRRRIKGNMDIELAVDMMEIADRIDHAVLFSG 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 D F +V A+QRK +V++VS++ + P M +D LRRQAD F++LA + R E + Sbjct: 121 DADFRRVVEAVQRKGVRVSVVSSIRTSPPMIADDLRRQADEFLELADIATFFTRRQMEPR 180 >gi|148259544|ref|YP_001233671.1| hypothetical protein Acry_0528 [Acidiphilium cryptum JF-5] gi|326402750|ref|YP_004282831.1| hypothetical protein ACMV_06020 [Acidiphilium multivorum AIU301] gi|146401225|gb|ABQ29752.1| protein of unknown function DUF88 [Acidiphilium cryptum JF-5] gi|325049611|dbj|BAJ79949.1| hypothetical protein ACMV_06020 [Acidiphilium multivorum AIU301] Length = 190 Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats. Identities = 92/178 (51%), Positives = 131/178 (73%), Gaps = 3/178 (1%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 P+EK ALFIDGANLYA+S+ALGFD+DYR+LL F R ++RAYYY+ ++ +++SPL Sbjct: 5 PQEKTALFIDGANLYAASRALGFDVDYRRLLDFF-DRVNLVRAYYYSALLDT--EEYSPL 61 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 PL DWL YNG+ +V K AKEFT+ GR+RVK +MD+ELA+D E + ++H ++FSGD Sbjct: 62 KPLTDWLAYNGYTLVTKPAKEFTDGAGRRRVKGNMDIELAIDMLEMAPHIDHAILFSGDS 121 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 F LV A+QR+ +V+++ST+ + P M +D+LRRQ+D F+DLA + NE R E + Sbjct: 122 DFRRLVEAVQRRGVRVSVISTIKTSPPMIADELRRQSDQFVDLADIANEFTRRQTEPR 179 >gi|323139351|ref|ZP_08074403.1| protein of unknown function DUF88 [Methylocystis sp. ATCC 49242] gi|322395417|gb|EFX97966.1| protein of unknown function DUF88 [Methylocystis sp. ATCC 49242] Length = 215 Score = 182 bits (461), Expect = 2e-44, Method: Composition-based stats. Identities = 95/176 (53%), Positives = 132/176 (75%), Gaps = 2/176 (1%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +E+IALFIDGANLY ++K FDIDYR+LL F R +IRA+YYT V+ D ++FS + Sbjct: 4 QERIALFIDGANLYQAAKTQSFDIDYRRLLSEFEQRGRLIRAFYYTAVIED--EEFSSIR 61 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 PL+DWL YNG+ VV K AK F + G +++K +MDVELAVDA ++ ++H+ +FSGDG Sbjct: 62 PLIDWLDYNGYAVVTKPAKAFVDATGHRKIKGNMDVELAVDAMGMADHIDHMWLFSGDGD 121 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 F +LVAA+QRK +V++VST+ + PSM +D+LRRQAD +DLA L ++I RDP+E Sbjct: 122 FCSLVAAVQRKGVRVSVVSTITTRPSMLADELRRQADEVIDLADLADKIGRDPNER 177 >gi|197105347|ref|YP_002130724.1| hypothetical protein PHZ_c1884 [Phenylobacterium zucineum HLK1] gi|196478767|gb|ACG78295.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1] Length = 195 Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats. Identities = 99/180 (55%), Positives = 137/180 (76%), Gaps = 2/180 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F P +++ALFIDGANLY+++K LGFDIDYRKLL+ FR R++++RAYYYT +V + +++S Sbjct: 3 FYPTDRLALFIDGANLYSAAKNLGFDIDYRKLLEEFRKRSVLVRAYYYTALVEN--EEYS 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 P+ PL+DWL YNG+++V K A+E+T++ GRKR + MDVE+AVD E + +HLV+FSG Sbjct: 61 PIRPLVDWLDYNGYRLVTKSAREYTDSQGRKRWRGDMDVEIAVDMLEMAAHADHLVLFSG 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 DG F LV A+QRK +VT+VST+ S P M SD+LRRQAD F+DLA L + I R + Sbjct: 121 DGDFRALVEAVQRKGSRVTVVSTLKSQPPMVSDELRRQADSFVDLADLADIIGRPSRLPR 180 >gi|315499955|ref|YP_004088758.1| hypothetical protein Astex_2970 [Asticcacaulis excentricus CB 48] gi|315417967|gb|ADU14607.1| hypothetical protein Astex_2970 [Asticcacaulis excentricus CB 48] Length = 189 Score = 181 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 101/179 (56%), Positives = 130/179 (72%), Gaps = 2/179 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F P +KIALFIDGANLY+++KAL FDIDYRKLL FR R I++RAYYYT +V +S Sbjct: 3 FYPTDKIALFIDGANLYSAAKALNFDIDYRKLLDEFRKRGILLRAYYYTALVEG--DDYS 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 P+ PL+DWL YNGF ++ K AKE+T+ GRKR + MD+E+A D E +E +HLV+FSG Sbjct: 61 PIRPLVDWLDYNGFALITKTAKEYTDAQGRKRWRGDMDIEIACDMMEIAEHADHLVLFSG 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 DG F L+ A+QRK +VT+VSTV S P M SD+LRRQAD F+DLA L + + R + Sbjct: 121 DGDFRRLIEAVQRKGCRVTVVSTVKSQPPMTSDELRRQADTFVDLADLASVVGRPRQQQ 179 >gi|83311350|ref|YP_421614.1| hypothetical protein amb2251 [Magnetospirillum magneticum AMB-1] gi|82946191|dbj|BAE51055.1| Uncharacterized conserved protein [Magnetospirillum magneticum AMB-1] Length = 187 Score = 181 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 91/177 (51%), Positives = 133/177 (75%), Gaps = 2/177 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F E++ LFIDG+NLY++++ALGFDIDY+KLL F + +IRA+YYT ++ D Q++S Sbjct: 3 FYSAERLGLFIDGSNLYSAARALGFDIDYKKLLNLFAGKGRLIRAFYYTALMED--QEYS 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 P+ PL+DWL YNG+ +V K KEFT+ GR+++K +MD+ELA+D E + L+H+V+FSG Sbjct: 61 PIRPLVDWLDYNGYTMVTKPTKEFTDAMGRRKIKGNMDIELAIDVMEMCQYLDHVVLFSG 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 DG F LV A+QRK +V++VST+ S P M +D+LRRQAD F++L L+++IAR Sbjct: 121 DGDFRRLVEAVQRKGVRVSVVSTIRSQPPMVADELRRQADVFIELQDLESQIARAQQ 177 >gi|46201864|ref|ZP_00208280.1| COG1432: Uncharacterized conserved protein [Magnetospirillum magnetotacticum MS-1] Length = 187 Score = 181 bits (459), Expect = 4e-44, Method: Composition-based stats. Identities = 90/177 (50%), Positives = 133/177 (75%), Gaps = 2/177 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F E++ LFIDG+NLY+++++LGFDIDY+KLL F + +IRA+YYT ++ D Q++S Sbjct: 3 FYSAERLGLFIDGSNLYSAARSLGFDIDYKKLLNLFAGKGRLIRAFYYTALMED--QEYS 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 P+ PL+DWL YNG+ +V K KEFT+ GR+++K +MD+ELA+D E + L+H+V+FSG Sbjct: 61 PIRPLVDWLDYNGYTMVTKPTKEFTDAMGRRKIKGNMDIELAIDVMEMCQYLDHVVLFSG 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 DG F LV A+QRK +V++VST+ S P M +D+LRRQAD F++L L+++IAR Sbjct: 121 DGDFRRLVEAVQRKGVRVSVVSTIRSQPPMVADELRRQADVFIELQDLESQIARAQQ 177 >gi|254293927|ref|YP_003059950.1| hypothetical protein Hbal_1565 [Hirschia baltica ATCC 49814] gi|254042458|gb|ACT59253.1| protein of unknown function DUF88 [Hirschia baltica ATCC 49814] Length = 184 Score = 180 bits (456), Expect = 8e-44, Method: Composition-based stats. Identities = 90/174 (51%), Positives = 125/174 (71%), Gaps = 2/174 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F E+IALFIDGANLY+++K L ++DYR+LL FR + ++RAYYYT ++ + +++S Sbjct: 3 FYKDERIALFIDGANLYSAAKTLNVELDYRRLLSEFRKKGRLLRAYYYTALIEN--EEYS 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 P+ PL+DWL YNG+ VV K AKEFT+ GR+RVK MDVE+AVD ++ L+H ++FSG Sbjct: 61 PIRPLVDWLQYNGYNVVTKPAKEFTDAAGRRRVKGDMDVEIAVDMLTLADKLDHAILFSG 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 DG T LV ALQ + +V++VS+V + P M SD LRR AD F+DL+ L I R Sbjct: 121 DGDLTVLVKALQNRGLRVSVVSSVKTQPPMISDDLRRSADNFIDLSDLVKIIGR 174 >gi|329890088|ref|ZP_08268431.1| hypothetical protein BDIM_17840 [Brevundimonas diminuta ATCC 11568] gi|328845389|gb|EGF94953.1| hypothetical protein BDIM_17840 [Brevundimonas diminuta ATCC 11568] Length = 193 Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats. Identities = 88/177 (49%), Positives = 119/177 (67%), Gaps = 2/177 (1%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 P ++IALFIDGANLY++++AL D+D++KL F +IRAYYYT ++ ++FSP Sbjct: 4 HPDDRIALFIDGANLYSAARALNCDLDFKKLSTWFVGEGRLIRAYYYTAIIEG--EEFSP 61 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 + PL+DWL YNGF VV K K FT+ G R K +MD+E+AVD E + L+ V+FSGD Sbjct: 62 VRPLVDWLDYNGFTVVTKPVKRFTDAQGHSRTKGNMDMEIAVDMLELAPRLDQAVLFSGD 121 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 G F +V ALQ K +VT+VSTV S P SD LRRQAD F+DLA + N++ + Sbjct: 122 GDFRRVVQALQAKGVRVTVVSTVKSQPPQISDDLRRQADAFVDLADIMNQVGKPKAA 178 >gi|239787551|emb|CAX84020.1| conserved uncharacterized protein [uncultured bacterium] Length = 206 Score = 179 bits (453), Expect = 2e-43, Method: Composition-based stats. Identities = 100/188 (53%), Positives = 139/188 (73%), Gaps = 10/188 (5%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F P+E++ALFIDG+NLYA+++ALGFDIDY++LL+ F + +IRA+YYT +V D Q++S Sbjct: 3 FYPQERVALFIDGSNLYAAARALGFDIDYKRLLQMFAGKGRLIRAFYYTALVED--QEYS 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 P+ PL+DWL YNG+ +V K KEFT+ GR+++K +MD+ELA+D E SE L+H+V+FSG Sbjct: 61 PIRPLVDWLDYNGYTMVTKPTKEFTDASGRRKIKGNMDIELAIDVMEMSEHLDHIVLFSG 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD----- 176 DG F LV A+QRK +VT+VSTV S P M +D+LRRQAD F++L L+ I R Sbjct: 121 DGDFRRLVDAVQRKGVRVTVVSTVRSQPPMVADELRRQADNFVELQDLQPSIERTIANRE 180 Query: 177 ---PDEDK 181 P ED+ Sbjct: 181 HGAPREDR 188 >gi|117925174|ref|YP_865791.1| hypothetical protein Mmc1_1877 [Magnetococcus sp. MC-1] gi|117608930|gb|ABK44385.1| protein of unknown function DUF88 [Magnetococcus sp. MC-1] Length = 194 Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats. Identities = 86/177 (48%), Positives = 128/177 (72%), Gaps = 3/177 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 +F E++ +FIDG+NLYA+ ++LGFD DY+KLL+ FRS+A +IRAYY+T + D Q++ Sbjct: 10 IFRQDERVMVFIDGSNLYAAIRSLGFDFDYKKLLRYFRSQANLIRAYYFTALGDD--QEY 67 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119 SP+ PL+DWL YNG+ VV K KE+ + G KR K +MD+E+AVD + + +H V+F Sbjct: 68 SPIRPLVDWLAYNGYAVVTKPIKEYVDPVTGHKRTKGNMDIEIAVDMMKLAPYYDHAVLF 127 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 SGDG F ++V Q + K VT+VS++++ P M +D+LRRQADYF++L +K + RD Sbjct: 128 SGDGDFRSVVEVAQGQGKVVTVVSSLMTQPPMIADELRRQADYFIELNRIKEHLQRD 184 >gi|27377446|ref|NP_768975.1| hypothetical protein bll2335 [Bradyrhizobium japonicum USDA 110] gi|27350590|dbj|BAC47600.1| bll2335 [Bradyrhizobium japonicum USDA 110] Length = 203 Score = 174 bits (442), Expect = 4e-42, Method: Composition-based stats. Identities = 101/177 (57%), Positives = 137/177 (77%), Gaps = 3/177 (1%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 EKIALFIDG+NL+A+SKALGFDIDYR+LL F+SR ++RA+YYTT++ D Q++S + P Sbjct: 5 EKIALFIDGSNLHATSKALGFDIDYRRLLGEFQSRGALLRAFYYTTLIED--QEYSSIRP 62 Query: 66 LLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 L+DWL YNG+ VV K KEF + GR++VK SMDV+LAV+A E +E ++ +V+FSGDG Sbjct: 63 LIDWLDYNGYTVVTKFTKEFVDAITGRRKVKGSMDVDLAVNAMELAEHVDQIVLFSGDGN 122 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 F +LV ALQR+ +VT+VST+ + P+M +D LRRQAD F+DLA LK ++ RDP Sbjct: 123 FRSLVEALQRRGVRVTVVSTLCTQPAMVADDLRRQADVFIDLAELKPKVGRDPANRP 179 >gi|83858189|ref|ZP_00951711.1| hypothetical protein OA2633_01781 [Oceanicaulis alexandrii HTCC2633] gi|83853012|gb|EAP90864.1| hypothetical protein OA2633_01781 [Oceanicaulis alexandrii HTCC2633] Length = 190 Score = 173 bits (439), Expect = 8e-42, Method: Composition-based stats. Identities = 90/179 (50%), Positives = 133/179 (74%), Gaps = 2/179 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F P EK+ LFIDGANLY++++ L FDIDY++LL+ FR R +IRA YYT ++ ++++ Sbjct: 3 FYPNEKLGLFIDGANLYSAARNLDFDIDYKRLLEEFRKRGRLIRANYYTALIES--EEYT 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 P+ PL+DWL YNGF+V+ K AKE+T++ GR+R+K MDV+LA+D E ++ L+H+V+FSG Sbjct: 61 PIRPLIDWLDYNGFKVITKAAKEYTDDSGRRRIKGDMDVDLAIDVMEAADYLDHIVLFSG 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 DG F +V A+QRK +V++VST+ S P MA+D LRRQAD F++L L + R+ + Sbjct: 121 DGDFKKVVEAVQRKGVRVSVVSTLKSSPPMAADDLRRQADTFIELQDLGKLVGRERRQR 179 >gi|258541738|ref|YP_003187171.1| hypothetical protein APA01_06420 [Acetobacter pasteurianus IFO 3283-01] gi|256632816|dbj|BAH98791.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01] gi|256635873|dbj|BAI01842.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03] gi|256638928|dbj|BAI04890.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07] gi|256641982|dbj|BAI07937.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22] gi|256645037|dbj|BAI10985.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26] gi|256648092|dbj|BAI14033.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32] gi|256651145|dbj|BAI17079.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654136|dbj|BAI20063.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12] Length = 207 Score = 173 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 81/181 (44%), Positives = 125/181 (69%), Gaps = 2/181 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 EK LFIDG++LY++S++LGFD+DY+KLL F ++ +IRAYYY ++ + +S Sbjct: 3 LQKTEKTCLFIDGSSLYSTSRSLGFDVDYKKLLDFFAAKTHIIRAYYYAAILDT--EDYS 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 PL PL DWL YNG+ +V K A+EFT++ G++RVK +MD+E+AVD E + ++H ++FSG Sbjct: 61 PLKPLTDWLSYNGYFLVTKPAREFTDSTGKRRVKGNMDIEIAVDMMEMAPHIDHAILFSG 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 D F +V A+QR+ +V++VS++ S P + D LRRQAD F++L+ L R E+ Sbjct: 121 DSDFRRVVEAVQRQGTRVSVVSSMRSTPPLIGDDLRRQADQFLELSALAGNFTRRQTENP 180 Query: 182 K 182 + Sbjct: 181 R 181 >gi|162147943|ref|YP_001602404.1| hypothetical protein GDI_2159 [Gluconacetobacter diazotrophicus PAl 5] gi|161786520|emb|CAP56102.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus PAl 5] Length = 210 Score = 173 bits (438), Expect = 1e-41, Method: Composition-based stats. Identities = 84/180 (46%), Positives = 127/180 (70%), Gaps = 2/180 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F P E++ LFIDGA+LY++S+ LGFD+DYR LL FRS+ VIRAYYY+ ++ +++S Sbjct: 10 FQPNERVCLFIDGASLYSASRHLGFDVDYRNLLTFFRSKCHVIRAYYYSAILES--EEYS 67 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 PL PL DWL YNG+ +V K A+EF ++ GR+RVK +MD+ELAVD E + ++H V+FSG Sbjct: 68 PLKPLTDWLVYNGYFLVTKTAREFVDHNGRRRVKGNMDIELAVDMMEMAPRIDHAVLFSG 127 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 D F L+ +QR+ + +++S++ + P + D+LRRQAD F++LA + + R E + Sbjct: 128 DADFRRLLETVQRQGVRTSVISSIRTSPPLIGDELRRQADQFIELADIAPQFTRRQAEAR 187 >gi|304321225|ref|YP_003854868.1| hypothetical protein PB2503_08354 [Parvularcula bermudensis HTCC2503] gi|303300127|gb|ADM09726.1| hypothetical protein PB2503_08354 [Parvularcula bermudensis HTCC2503] Length = 206 Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats. Identities = 84/181 (46%), Positives = 127/181 (70%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 DP +K A+FIDGANLY +++ LGFDIDY++LL+ R+ ++RAYYYT + + EQ +S Sbjct: 3 LDPDDKTAIFIDGANLYKTARNLGFDIDYKRLLQKTRAETRLVRAYYYTAMPEEREQDYS 62 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 PL PL+DWL YNG+ ++ K A+EFT++ GRKR + S+D++LA+D E ++ ++ LV+F+G Sbjct: 63 PLRPLVDWLDYNGYTMMTKAAREFTDSQGRKRFRGSVDIDLALDFVEMADKVDCLVLFTG 122 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 +G F +A Q + +V VST + P MASD +RRQAD F+DL L++ I R + Sbjct: 123 NGDFRPAIAKAQSRGCRVICVSTTATQPPMASDDIRRQADQFVDLTSLEDVIGRKSTSHR 182 Query: 182 K 182 + Sbjct: 183 R 183 >gi|114800400|ref|YP_759598.1| hypothetical protein HNE_0871 [Hyphomonas neptunium ATCC 15444] gi|114740574|gb|ABI78699.1| conserved hypothetical protein [Hyphomonas neptunium ATCC 15444] Length = 189 Score = 172 bits (436), Expect = 2e-41, Method: Composition-based stats. Identities = 89/179 (49%), Positives = 129/179 (72%), Gaps = 2/179 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F E++ALFIDGANLY++++A+G +ID+RKLLK F+SR ++RA YYT +V ++S Sbjct: 3 FYKDERLALFIDGANLYSAARAVGLEIDFRKLLKEFQSRGRLVRASYYTALVES--DEYS 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 P+ PL+DWL YNGF VV K A+EF + GRKRV+ +MDVELAVD E + +H+V+FSG Sbjct: 61 PIRPLVDWLAYNGFNVVKKPAREFVDREGRKRVRGNMDVELAVDMLEAAAYCDHIVLFSG 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 +G F LV A++ + +V++VST+ + P M SD LRR+AD F++L L + +AR + Sbjct: 121 NGDFRRLVEAVKARGVRVSVVSTMNATPPMISDDLRREADTFIELTDLGDLVARPRRDT 179 >gi|329114476|ref|ZP_08243238.1| Hypothetical protein APO_1273 [Acetobacter pomorum DM001] gi|326696552|gb|EGE48231.1| Hypothetical protein APO_1273 [Acetobacter pomorum DM001] Length = 207 Score = 172 bits (435), Expect = 2e-41, Method: Composition-based stats. Identities = 81/181 (44%), Positives = 125/181 (69%), Gaps = 2/181 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 EK LFIDG++LY++S++LGFD+DY+KLL F ++ +IRAYYY ++ + +S Sbjct: 3 LQKTEKTCLFIDGSSLYSTSRSLGFDVDYKKLLDFFAAKTHIIRAYYYAAILDT--EDYS 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 PL PL DWL YNG+ +V K A+EFT++ G++RVK +MD+E+AVD E + ++H ++FSG Sbjct: 61 PLKPLTDWLSYNGYFLVTKPAREFTDSTGKRRVKGNMDIEIAVDMLEMAPHIDHAILFSG 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 D F +V A+QR+ +V++VS++ S P + D LRRQAD F++L+ L R E+ Sbjct: 121 DSDFRRVVEAVQRQGTRVSVVSSMRSTPPLIGDDLRRQADQFLELSALAGNFTRRQTENP 180 Query: 182 K 182 + Sbjct: 181 R 181 >gi|209542561|ref|YP_002274790.1| hypothetical protein Gdia_0379 [Gluconacetobacter diazotrophicus PAl 5] gi|209530238|gb|ACI50175.1| protein of unknown function DUF88 [Gluconacetobacter diazotrophicus PAl 5] Length = 203 Score = 171 bits (433), Expect = 4e-41, Method: Composition-based stats. Identities = 84/180 (46%), Positives = 127/180 (70%), Gaps = 2/180 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F P E++ LFIDGA+LY++S+ LGFD+DYR LL FRS+ VIRAYYY+ ++ +++S Sbjct: 3 FQPNERVCLFIDGASLYSASRHLGFDVDYRNLLTFFRSKCHVIRAYYYSAILES--EEYS 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 PL PL DWL YNG+ +V K A+EF ++ GR+RVK +MD+ELAVD E + ++H V+FSG Sbjct: 61 PLKPLTDWLVYNGYFLVTKTAREFVDHNGRRRVKGNMDIELAVDMMEMAPRIDHAVLFSG 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 D F L+ +QR+ + +++S++ + P + D+LRRQAD F++LA + + R E + Sbjct: 121 DADFRRLLETVQRQGVRTSVISSIRTSPPLIGDELRRQADQFIELADIAPQFTRRQAEAR 180 >gi|312114148|ref|YP_004011744.1| hypothetical protein Rvan_1386 [Rhodomicrobium vannielii ATCC 17100] gi|311219277|gb|ADP70645.1| hypothetical protein Rvan_1386 [Rhodomicrobium vannielii ATCC 17100] Length = 178 Score = 170 bits (431), Expect = 7e-41, Method: Composition-based stats. Identities = 83/178 (46%), Positives = 118/178 (66%), Gaps = 2/178 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F E++ LF+DG NL+A+++ LGF IDY LL+ FR+ +IR YY + D S Sbjct: 3 FYQNERLGLFLDGPNLFAAARTLGFMIDYGSLLRLFRNSGQLIRVNYYLPIADDFAT--S 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 PL + DWL YNG+ V+ K AK++ + GR+++KS MD+ELAVDA + L+H+V+FSG Sbjct: 61 PLRGVSDWLQYNGYTVITKPAKDYVDANGRRKIKSGMDIELAVDALSLANSLDHIVLFSG 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 G F LV+ALQR+ ++VT+VST+ + P + +D LRR AD F+DLA L I R P Sbjct: 121 LGDFCGLVSALQRRGRRVTVVSTIRTQPPIVADDLRRMADQFIDLADLAPMIGRAPAA 178 >gi|296115034|ref|ZP_06833676.1| hypothetical protein GXY_04609 [Gluconacetobacter hansenii ATCC 23769] gi|295978371|gb|EFG85107.1| hypothetical protein GXY_04609 [Gluconacetobacter hansenii ATCC 23769] Length = 204 Score = 170 bits (430), Expect = 9e-41, Method: Composition-based stats. Identities = 83/180 (46%), Positives = 131/180 (72%), Gaps = 2/180 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F P+E++ LFIDG +LY++S+ LGF++DYRKLL FRS++ V+RAYYY+ V+ +++S Sbjct: 3 FQPQERLCLFIDGTSLYSASRNLGFEVDYRKLLSFFRSKSNVLRAYYYSAVLET--EEYS 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 PL PL DWL YNG+ +V K A+E+T++ GR+RVK +MD+ELAVD E + ++H V+FSG Sbjct: 61 PLKPLTDWLVYNGYFLVTKTAREYTDHTGRRRVKGNMDIELAVDMLEMAPRIDHAVLFSG 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 D L+ A+QR+ + T+++++ + P + D+LRRQAD F++LA + + R E++ Sbjct: 121 DADSRRLLEAVQRQGVRTTVIASIKTSPPLIGDELRRQADQFIELADIASHFTRRQIENR 180 >gi|307322655|ref|ZP_07601988.1| protein of unknown function DUF88 [Sinorhizobium meliloti AK83] gi|306891701|gb|EFN22554.1| protein of unknown function DUF88 [Sinorhizobium meliloti AK83] Length = 200 Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats. Identities = 97/181 (53%), Positives = 138/181 (76%), Gaps = 2/181 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MFD REKIALFIDG +L+++S++LGF+IDYR++L+AFR R ++R Y YT V+ D Sbjct: 1 MFDSREKIALFIDGPSLFSASRSLGFEIDYRRVLEAFRRRGYLLRVYLYTAVIEDDAH-- 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 + +DWL YNG+QVV KVA +FT+ G++++K +M +ELA+DA EQ+ ++HLVI + Sbjct: 59 KSMRSWIDWLDYNGYQVVTKVAVKFTDFAGQQKIKGNMALELAIDAMEQASNVDHLVIVT 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GD F LV A+QRK +KV+IVST+LS P M +D LRRQAD+F+DLA L++EIAR+P + Sbjct: 119 GDSVFLALVEAIQRKGRKVSIVSTMLSRPPMVADDLRRQADHFIDLATLQHEIAREPSKY 178 Query: 181 K 181 + Sbjct: 179 R 179 >gi|330993366|ref|ZP_08317301.1| hypothetical protein SXCC_03264 [Gluconacetobacter sp. SXCC-1] gi|329759396|gb|EGG75905.1| hypothetical protein SXCC_03264 [Gluconacetobacter sp. SXCC-1] Length = 202 Score = 168 bits (426), Expect = 2e-40, Method: Composition-based stats. Identities = 82/180 (45%), Positives = 128/180 (71%), Gaps = 2/180 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F P+E++ LFIDG +LY++S+ LGF++DYRKLL+ FR+++ V+RAYYY+ V+ +++S Sbjct: 3 FQPQERLCLFIDGTSLYSASRNLGFEVDYRKLLQFFRAKSNVLRAYYYSAVLDT--EEYS 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 PL PL DWL YNG+ +V K A+EF ++ GR+RV+ +MDVEL VD E + ++H V+FSG Sbjct: 61 PLKPLTDWLVYNGYTLVTKNAREFIDHNGRRRVRGNMDVELTVDMMEMAPHIDHAVLFSG 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 D F L+ ++QR+ + T+V ++ + P + D+LRRQAD F++LA + R E + Sbjct: 121 DSDFRRLLESVQRQGVRTTVVGSIKTTPPLIGDELRRQADQFIELADISANFMRRHIESR 180 >gi|157273336|gb|ABV27235.1| RtsE [Candidatus Chloracidobacterium thermophilum] Length = 332 Score = 168 bits (425), Expect = 3e-40, Method: Composition-based stats. Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 12/177 (6%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 R ++A+FIDG NL+ ++++ G +IDY KLL R ++RA++YT V +QQ Sbjct: 21 NRGRVAIFIDGNNLFHAARSAGVEIDYAKLLAYLRGDDPLLRAFFYTGV----DQQAERQ 76 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L W+ NG++VV K K F + K+++DVE+AVD ++ + ++ SGD Sbjct: 77 QGFLLWMRRNGYRVVQKELKTFPDGT----KKANLDVEIAVDMLSLADKYDTAILVSGDE 132 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 FT + + K +V + + S +L AD F +L + EI++ P + Sbjct: 133 DFTYALNVIAYKGVRVEVAGF----RANTSPRLIDVADRFHELDSVLAEISKSPSKR 185 >gi|22298293|ref|NP_681540.1| hypothetical protein tlr0751 [Thermosynechococcus elongatus BP-1] gi|22294472|dbj|BAC08302.1| tlr0751 [Thermosynechococcus elongatus BP-1] Length = 227 Score = 166 bits (421), Expect = 9e-40, Method: Composition-based stats. Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 12/177 (6%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 R ++A+FIDG+NL+ ++ LG +IDY KLL + + R+++YT V E+Q Sbjct: 16 LQNRGRVAIFIDGSNLFYAALQLGIEIDYSKLLCHLTQGSRLFRSFFYTGVDPTNEKQ-- 73 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 L W+ NG++VV+K + + K+++DVE+AVD + ++ SG Sbjct: 74 --QGFLLWMRRNGYRVVSKELVQLPDGS----KKANLDVEIAVDMMALVGCYDTAILVSG 127 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 DG V A+ + +V +VS SM SD L AD ++DL ++ EI + P Sbjct: 128 DGDLAYAVDAVSYRGARVEVVS----LRSMTSDSLINVADRYIDLESIREEIQKAPR 180 >gi|144899867|emb|CAM76731.1| protein containing DUF88 [Magnetospirillum gryphiswaldense MSR-1] Length = 193 Score = 166 bits (420), Expect = 1e-39, Method: Composition-based stats. Identities = 94/174 (54%), Positives = 132/174 (75%), Gaps = 2/174 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F E++ LFIDG+NLYA++KALGFDIDY++LL F ++ +IRA+YYT +V D Q++S Sbjct: 8 FYDSERVGLFIDGSNLYAAAKALGFDIDYKRLLDHFATKGRLIRAFYYTALVED--QEYS 65 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 P+ PL+DWL YNG+ +V K KEFT+ GR+++K +MD+ELA+D E + L+H+V+FSG Sbjct: 66 PIRPLVDWLDYNGYTMVTKPTKEFTDAAGRRKIKGNMDIELAIDVMEMAPHLDHVVLFSG 125 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 DG F LV A+QRK +VT+VSTV S P M +D+LRRQAD F++L L++ I R Sbjct: 126 DGDFRRLVEAIQRKGVRVTVVSTVRSQPPMVADELRRQADSFLELLDLESIIGR 179 >gi|220908708|ref|YP_002484019.1| hypothetical protein Cyan7425_3333 [Cyanothece sp. PCC 7425] gi|219865319|gb|ACL45658.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7425] Length = 207 Score = 165 bits (418), Expect = 2e-39, Method: Composition-based stats. Identities = 59/178 (33%), Positives = 96/178 (53%), Gaps = 12/178 (6%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + R ++A+FIDG+NL+ ++ LG +IDY KLL S + ++R+++YT V E+Q Sbjct: 16 LENRGRVAIFIDGSNLFYAALQLGIEIDYSKLLCRLTSGSRLLRSFFYTGVDPTNEKQ-- 73 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 L W+ NG++V+AK + + K+++DVE+AVD + V+ SG Sbjct: 74 --QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDMMSLVGSYDTGVLVSG 127 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 DG V A+ + +V +VS SM SD L AD ++DL +K +I + P Sbjct: 128 DGDLAYAVDAVSYRGVRVEVVS----LRSMTSDSLINVADRYIDLDSIKEDIQKAPRS 181 >gi|114570128|ref|YP_756808.1| hypothetical protein Mmar10_1578 [Maricaulis maris MCS10] gi|114340590|gb|ABI65870.1| protein of unknown function DUF88 [Maricaulis maris MCS10] Length = 179 Score = 164 bits (414), Expect = 7e-39, Method: Composition-based stats. Identities = 87/178 (48%), Positives = 130/178 (73%), Gaps = 2/178 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F P E+I LFIDGANL++++KAL FDID+++LL+ FR R +IRA YYT ++ ++++ Sbjct: 3 FYPDERIGLFIDGANLFSTTKALDFDIDFKRLLEEFRKRGKLIRANYYTALLE--HEEYN 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 PL PL+DWL YNGF V+ K AKE+T++ GR+R+K MD+ELAVD E + L+H+++F+G Sbjct: 61 PLRPLVDWLDYNGFSVITKPAKEYTDDHGRRRIKGDMDIELAVDMLEAATYLDHIILFTG 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 DG F +AA + K ++++VS++ + PSM SD LRR+AD F++L L+ I R P Sbjct: 121 DGDFRYALAAARAKGARISVVSSLKTSPSMISDDLRREADAFIELDDLRAMIGRAPAS 178 >gi|56750416|ref|YP_171117.1| hypothetical protein syc0407_c [Synechococcus elongatus PCC 6301] gi|81299952|ref|YP_400160.1| hypothetical protein Synpcc7942_1143 [Synechococcus elongatus PCC 7942] gi|56685375|dbj|BAD78597.1| hypothetical protein [Synechococcus elongatus PCC 6301] gi|81168833|gb|ABB57173.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942] Length = 198 Score = 164 bits (414), Expect = 7e-39, Method: Composition-based stats. Identities = 60/180 (33%), Positives = 97/180 (53%), Gaps = 12/180 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + R +IA+FIDG+NL+ ++ LG +IDY KLL + + ++R+++YT V E+Q Sbjct: 16 ILENRGRIAIFIDGSNLFYAALQLGIEIDYTKLLACLTNGSRLLRSFFYTGVDRSNEKQ- 74 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++VVAK + + K+++DVE+AVD + + V+ S Sbjct: 75 ---QGFLLWMRRNGYRVVAKDLIQLPDGT----KKANLDVEIAVDMLALAGTYDTAVLVS 127 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG V + + +V +VS SM SD L AD ++DL LK I + P + Sbjct: 128 GDGDLAYAVEVVGYRGVRVEVVS----LRSMTSDNLINVADRYIDLESLKASIQKLPRQP 183 >gi|6459785|gb|AAF11547.1|AE002037_8 conserved hypothetical protein [Deinococcus radiodurans R1] Length = 263 Score = 162 bits (411), Expect = 1e-38, Method: Composition-based stats. Identities = 61/172 (35%), Positives = 95/172 (55%), Gaps = 7/172 (4%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 E+IALFIDGAN+YA++K LG++ D+RK+L+ F + A+YYT V + + Sbjct: 64 MERIALFIDGANVYAAAKRLGWNFDHRKILEHFAGLGALYNAFYYTAVPWPVDDKQKR-- 121 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 +D L Y G+ V + +E T+ G ++S+D+EL D + V+ SGDG Sbjct: 122 -FVDALTYMGYTVRTRPLRENTDENGDTSRRASLDIELVTDLLTTESRYDVAVLLSGDGD 180 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 F V L+ + KKV + S P M S +LR AD ++DLA ++ ++ R Sbjct: 181 FERPVEVLRARGKKVIVASI----PEMTSAELRNAADEYVDLASIREQVERP 228 >gi|119487031|ref|ZP_01620903.1| hypothetical protein L8106_18981 [Lyngbya sp. PCC 8106] gi|119455960|gb|EAW37094.1| hypothetical protein L8106_18981 [Lyngbya sp. PCC 8106] Length = 205 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 58/179 (32%), Positives = 95/179 (53%), Gaps = 12/179 (6%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++R+++YT V E+Q Sbjct: 17 LENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRSFFYTGVDRTNEKQ-- 74 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 L W+ NG++V+AK + + K+++DVE+AVD + V+ SG Sbjct: 75 --QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDMLALVGSYDTAVLVSG 128 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 DG V + + +V +VS SM SD L AD ++DL +K EI ++P Sbjct: 129 DGDLAYAVDCVSYRGVRVEVVS----LRSMTSDSLINVADRYIDLENVKEEIQKNPRSP 183 >gi|282900793|ref|ZP_06308733.1| protein of unknown function DUF88 [Cylindrospermopsis raciborskii CS-505] gi|281194323|gb|EFA69280.1| protein of unknown function DUF88 [Cylindrospermopsis raciborskii CS-505] Length = 251 Score = 162 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 56/178 (31%), Positives = 97/178 (54%), Gaps = 12/178 (6%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++RA++YT V E+Q Sbjct: 59 LENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRAFFYTGVDRTNEKQ-- 116 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 L W+ NG++V+AK + + K+++DVE+AVD + + V+ SG Sbjct: 117 --QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDMMALVDSYDTAVLVSG 170 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 DG V ++ + +V +VS SM SD L +D ++DL ++ +I + P + Sbjct: 171 DGDLAYAVNSVSYRGVRVEVVS----LRSMTSDSLINVSDRYIDLEAIREDIQKTPRQ 224 >gi|294084108|ref|YP_003550866.1| hypothetical protein SAR116_0539 [Candidatus Puniceispirillum marinum IMCC1322] gi|292663681|gb|ADE38782.1| Protein of unknown function DUF88 [Candidatus Puniceispirillum marinum IMCC1322] Length = 183 Score = 161 bits (408), Expect = 3e-38, Method: Composition-based stats. Identities = 76/178 (42%), Positives = 118/178 (66%), Gaps = 3/178 (1%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +K ALFIDG+N YA+++AL DID+ ++ F +IRAYYYT + D Q+FS L Sbjct: 1 MDKTALFIDGSNFYAAARALNLDIDFARMRTHFAKDTNLIRAYYYTAIPED--QEFSSLR 58 Query: 65 PLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 PL+DWL YNG+ VV+K+ +EF + GR+R+K +MD+ELA+D + + ++H ++FSGDG Sbjct: 59 PLVDWLDYNGYAVVSKLTREFIDEETGRRRLKGNMDMELALDMLKLAPHIDHAILFSGDG 118 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 F L+ +Q + T+VST + P M +DQLRR AD ++D+A + +I++ + Sbjct: 119 DFCRLLEDVQALGVRTTVVSTNKTSPPMVADQLRRMADVYIDMADIAADISKSSSKAP 176 >gi|254461881|ref|ZP_05075297.1| hypothetical protein RB2083_2472 [Rhodobacterales bacterium HTCC2083] gi|206678470|gb|EDZ42957.1| hypothetical protein RB2083_2472 [Rhodobacteraceae bacterium HTCC2083] Length = 200 Score = 161 bits (407), Expect = 4e-38, Method: Composition-based stats. Identities = 73/177 (41%), Positives = 115/177 (64%), Gaps = 2/177 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E+IA+FIDG +L+A SKALGFDID++ K F R + + Y+TT+V ++F Sbjct: 1 MFYKDERIAVFIDGKSLFACSKALGFDIDFKLFRKEFSQRGKLNKLSYFTTLVDS--EEF 58 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + PL+DWL YNG+ V K KE+ + GR++VK ++ VE+ + + ++H++I + Sbjct: 59 SSVKPLVDWLSYNGYNTVTKPVKEYVDTAGRRKVKGNISVEMTIAVLDMVPFVDHIIIVT 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 GD F LV A+Q++ +V++VS++ P M SD LRRQAD F++L L++ I + Sbjct: 119 GDKDFKPLVEAVQQRGTRVSVVSSIRVQPPMLSDDLRRQADNFIELDELRSVIEKPH 175 >gi|37522591|ref|NP_925968.1| hypothetical protein gll3022 [Gloeobacter violaceus PCC 7421] gi|35213592|dbj|BAC90963.1| gll3022 [Gloeobacter violaceus PCC 7421] Length = 216 Score = 161 bits (407), Expect = 4e-38, Method: Composition-based stats. Identities = 57/176 (32%), Positives = 96/176 (54%), Gaps = 12/176 (6%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 R ++A+FIDG+NL+ ++ LG +IDY KLL + + ++R+++YT V E+Q Sbjct: 19 RGRVAIFIDGSNLFYAALQLGIEIDYTKLLNRLTNGSRLLRSFFYTGVDRANEKQ----Q 74 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 L W+ NG++V+ K + + K+++DVE+AVD + + ++ SGDG Sbjct: 75 GFLLWMRRNGYRVITKDLVQLPDGS----KKANLDVEIAVDMLSLAGSYDTAILVSGDGD 130 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 V A K +V +VS SM SD L AD ++DL +K +I + P ++ Sbjct: 131 LAYAVNAASYKGVRVEVVS----LRSMTSDYLINVADRYIDLEQIKEDIQKAPRQN 182 >gi|284052456|ref|ZP_06382666.1| hypothetical protein AplaP_13393 [Arthrospira platensis str. Paraca] gi|291571487|dbj|BAI93759.1| hypothetical protein [Arthrospira platensis NIES-39] Length = 205 Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats. Identities = 59/180 (32%), Positives = 97/180 (53%), Gaps = 12/180 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + R ++A+FIDG+NL+ ++ LG +IDY KLL S + ++R+++YT V E+Q Sbjct: 18 ILENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTSGSRLLRSFFYTGVDRTNEKQ- 76 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++VVAK + + K+++DVE+AVD + V+ S Sbjct: 77 ---QGFLLWMRRNGYRVVAKDLVQLPDGS----KKANLDVEIAVDMIALVGAYDTAVLVS 129 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG V + + +V ++S SM SD L AD ++DL +K+EI + P Sbjct: 130 GDGDLAYAVDCVSYRGVRVEVIS----LRSMTSDSLINVADRYIDLEAIKDEIQKTPRSP 185 >gi|282896531|ref|ZP_06304551.1| Protein of unknown function DUF88 [Raphidiopsis brookii D9] gi|281198637|gb|EFA73518.1| Protein of unknown function DUF88 [Raphidiopsis brookii D9] Length = 248 Score = 160 bits (406), Expect = 6e-38, Method: Composition-based stats. Identities = 56/178 (31%), Positives = 97/178 (54%), Gaps = 12/178 (6%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++RA++YT V E+Q Sbjct: 56 LENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRAFFYTGVDRTNEKQ-- 113 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 L W+ NG++V+AK + + K+++DVE+AVD + + V+ SG Sbjct: 114 --QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDMMALVDSYDTAVLVSG 167 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 DG V ++ + +V +VS SM SD L +D ++DL ++ +I + P + Sbjct: 168 DGDLAYAVNSVSYRGVRVEVVS----LRSMTSDSLINVSDRYIDLEAIREDIQKTPRQ 221 >gi|94985935|ref|YP_605299.1| hypothetical protein Dgeo_1835 [Deinococcus geothermalis DSM 11300] gi|94556216|gb|ABF46130.1| protein of unknown function DUF88 [Deinococcus geothermalis DSM 11300] Length = 194 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 62/181 (34%), Positives = 101/181 (55%), Gaps = 11/181 (6%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 E+IALFIDGAN+YA++K LG++ D+RK+L+ FRS + A+YYT V + + Sbjct: 2 TERIALFIDGANVYAAAKRLGWNFDHRKMLEFFRSYGSLHNAFYYTAVPLPMDDKQKR-- 59 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 +D L Y G+ V + +E T+ G ++S+D+E+ D S+ + V+ +GDG Sbjct: 60 -FIDALTYMGYTVRTRPLRESTDEHGDTHRRASLDIEIVTDLLTTSDRFDTAVLLTGDGD 118 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA----RDPDED 180 F V L+ + K+V + S P M S +LR AD ++DL ++ ++ R P E Sbjct: 119 FERPVEVLRARGKRVVVASI----PEMTSYELRNAADEYVDLGAIREQVERLGYRLPSEQ 174 Query: 181 K 181 + Sbjct: 175 R 175 >gi|298492951|ref|YP_003723128.1| hypothetical protein Aazo_4859 ['Nostoc azollae' 0708] gi|298234869|gb|ADI66005.1| protein of unknown function DUF88 ['Nostoc azollae' 0708] Length = 210 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 57/178 (32%), Positives = 97/178 (54%), Gaps = 12/178 (6%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++RA++YT V E+Q Sbjct: 18 LENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRAFFYTGVDRTNEKQ-- 75 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 L W+ NG++V+AK + + K+++DVE+AVD + + V+ SG Sbjct: 76 --QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDMMALVDSYDTAVLVSG 129 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 DG V ++ + +V +VS SM SD L +D ++DL +K +I + P + Sbjct: 130 DGDLAYAVNSVSYRGVRVEVVS----LRSMTSDSLINVSDRYIDLEAIKEDIQKTPRQ 183 >gi|15807658|ref|NP_295720.1| hypothetical protein DR_1997m [Deinococcus radiodurans R1] gi|970086|dbj|BAA09936.1| ORF1 [Deinococcus radiodurans] Length = 200 Score = 159 bits (401), Expect = 2e-37, Method: Composition-based stats. Identities = 61/172 (35%), Positives = 95/172 (55%), Gaps = 7/172 (4%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 E+IALFIDGAN+YA++K LG++ D+RK+L+ F + A+YYT V + + Sbjct: 1 MERIALFIDGANVYAAAKRLGWNFDHRKILEHFAGLGALYNAFYYTAVPWPVDDKQKR-- 58 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 +D L Y G+ V + +E T+ G ++S+D+EL D + V+ SGDG Sbjct: 59 -FVDALTYMGYTVRTRPLRENTDENGDTSRRASLDIELVTDLLTTESRYDVAVLLSGDGD 117 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 F V L+ + KKV + S P M S +LR AD ++DLA ++ ++ R Sbjct: 118 FERPVEVLRARGKKVIVASI----PEMTSAELRNAADEYVDLASIREQVERP 165 >gi|186680639|ref|YP_001863835.1| hypothetical protein Npun_R0091 [Nostoc punctiforme PCC 73102] gi|186463091|gb|ACC78892.1| protein of unknown function DUF88 [Nostoc punctiforme PCC 73102] Length = 210 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 56/178 (31%), Positives = 97/178 (54%), Gaps = 12/178 (6%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++R+++YT V E+Q Sbjct: 18 LENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRSFFYTGVDRTNEKQ-- 75 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 L W+ NG++V+AK + + K+++DVE+AVD + + V+ SG Sbjct: 76 --QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDMMALVDSYDTAVLVSG 129 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 DG V ++ + +V +VS SM SD L +D ++DL +K +I + P + Sbjct: 130 DGDLAYAVNSVSYRGVRVEVVS----LRSMTSDSLINVSDRYIDLEAIKEDIQKTPRQ 183 >gi|218248715|ref|YP_002374086.1| hypothetical protein PCC8801_3991 [Cyanothece sp. PCC 8801] gi|257061778|ref|YP_003139666.1| hypothetical protein Cyan8802_4033 [Cyanothece sp. PCC 8802] gi|218169193|gb|ACK67930.1| protein of unknown function DUF88 [Cyanothece sp. PCC 8801] gi|256591944|gb|ACV02831.1| protein of unknown function DUF88 [Cyanothece sp. PCC 8802] Length = 226 Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats. Identities = 58/179 (32%), Positives = 95/179 (53%), Gaps = 12/179 (6%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++RA++YT V E+Q Sbjct: 42 LENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRAFFYTGVDRTNEKQ-- 99 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 L W+ NG++V+AK + + K+++DVE+AVD + VI SG Sbjct: 100 --QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDLMALVGSYDTAVIVSG 153 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 DG A+ + ++ +VS SM SD L AD ++DL +K +I + P + Sbjct: 154 DGDLAYAADAVSYRGSRIEVVS----LRSMTSDSLINVADRYIDLDQIKEDIQKSPKPN 208 >gi|284929296|ref|YP_003421818.1| hypothetical protein UCYN_07430 [cyanobacterium UCYN-A] gi|284809740|gb|ADB95437.1| uncharacterized conserved protein [cyanobacterium UCYN-A] Length = 227 Score = 158 bits (399), Expect = 4e-37, Method: Composition-based stats. Identities = 56/180 (31%), Positives = 96/180 (53%), Gaps = 12/180 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M + R ++A+FIDG+NL+ ++ LG +IDY +LL + ++RA++YT V E+Q Sbjct: 42 MLENRGRVAIFIDGSNLFYAALQLGIEIDYTRLLYRLTEGSRLLRAFFYTGVDRTNEKQ- 100 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++V+AK + + K+++DVE+AVD + +I S Sbjct: 101 ---QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDLMALVGSYDTAIIVS 153 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG ++ + +V +VS SM SD L AD+++DL +K +I + + Sbjct: 154 GDGDLAYAANSVSYRGARVEVVS----LRSMTSDSLINVADHYIDLDQIKEDIQKTSRTN 209 >gi|17227728|ref|NP_484276.1| hypothetical protein all0232 [Nostoc sp. PCC 7120] gi|75908934|ref|YP_323230.1| hypothetical protein Ava_2722 [Anabaena variabilis ATCC 29413] gi|17135210|dbj|BAB77756.1| all0232 [Nostoc sp. PCC 7120] gi|75702659|gb|ABA22335.1| Protein of unknown function DUF88 [Anabaena variabilis ATCC 29413] Length = 209 Score = 157 bits (398), Expect = 4e-37, Method: Composition-based stats. Identities = 57/178 (32%), Positives = 97/178 (54%), Gaps = 12/178 (6%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++RA++YT V E+Q Sbjct: 17 LENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRAFFYTGVDRTNEKQ-- 74 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 L W+ NG++V+AK + + K+++DVE+AVD + + V+ SG Sbjct: 75 --QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDMMALVDSYDTAVLVSG 128 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 DG V ++ + +V +VS SM SD L +D ++DL +K +I + P + Sbjct: 129 DGDLAYAVNSVSYRGVRVEVVS----LRSMTSDSLINVSDRYIDLEAIKEDIQKTPRQ 182 >gi|332707287|ref|ZP_08427340.1| hypothetical protein LYNGBM3L_34690 [Lyngbya majuscula 3L] gi|332354021|gb|EGJ33508.1| hypothetical protein LYNGBM3L_34690 [Lyngbya majuscula 3L] Length = 200 Score = 157 bits (398), Expect = 5e-37, Method: Composition-based stats. Identities = 56/179 (31%), Positives = 97/179 (54%), Gaps = 12/179 (6%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + R ++A+FIDG+NL+ ++ LG +IDY KLL + + ++R+++YT V E+Q Sbjct: 17 LENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTAGSRLLRSFFYTGVDRTNEKQ-- 74 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 L W+ NG++V+AK + + K+++DVE+AVD + V+ SG Sbjct: 75 --QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDMMALVGSYDTAVLVSG 128 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 DG V ++ + +V +VS SM SD L AD ++DL ++ I + P ++ Sbjct: 129 DGDLAYAVDSVSYRGVRVEVVS----LRSMTSDSLINVADRYIDLDTIQESIQKTPKQN 183 >gi|16331574|ref|NP_442302.1| hypothetical protein slr0650 [Synechocystis sp. PCC 6803] gi|1001641|dbj|BAA10372.1| slr0650 [Synechocystis sp. PCC 6803] Length = 201 Score = 157 bits (396), Expect = 9e-37, Method: Composition-based stats. Identities = 57/179 (31%), Positives = 95/179 (53%), Gaps = 12/179 (6%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++RA++YT V E+Q Sbjct: 17 LENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLHCLTGGSRLLRAFFYTGVDRSNEKQ-- 74 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 L W+ NG++V+AK + + K+++DVE+AVD + V+ SG Sbjct: 75 --QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDLMSLVGSYDTAVVVSG 128 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 DG A+ + ++ +VS SM SD L +D ++DL +K EI + P + Sbjct: 129 DGDLAYAADAVSYRGARIEVVS----LRSMTSDSLINVSDRYVDLDSIKEEIQKQPRPN 183 >gi|58040236|ref|YP_192200.1| hypothetical protein GOX1805 [Gluconobacter oxydans 621H] gi|58002650|gb|AAW61544.1| Hypothetical protein GOX1805 [Gluconobacter oxydans 621H] Length = 202 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 79/180 (43%), Positives = 114/180 (63%), Gaps = 2/180 (1%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 E+ ALFIDGA+L+ +++ LGF++D+R L F S+ + RA+YY + +S Sbjct: 3 LRQNERTALFIDGASLHHAARNLGFEVDFRSLRNLFESQCLFQRAFYYAAMPET--DDYS 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 PL PL DWL YNG+ +V K A+EFT++ GR+R+K +MDVEL VD EQ+ L+H VI SG Sbjct: 61 PLRPLTDWLAYNGYHLVLKNAREFTDHSGRRRIKGNMDVELTVDLLEQASRLDHAVIVSG 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 D V A+Q + +VT++S++ S P M D LRRQAD F++LA + R E + Sbjct: 121 DSDLRRAVEAVQARGVRVTVISSMRSTPLMIGDDLRRQADLFVELADIAPSFTRRQAEPR 180 >gi|113475474|ref|YP_721535.1| hypothetical protein Tery_1805 [Trichodesmium erythraeum IMS101] gi|110166522|gb|ABG51062.1| protein of unknown function DUF88 [Trichodesmium erythraeum IMS101] Length = 204 Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats. Identities = 53/180 (29%), Positives = 95/180 (52%), Gaps = 12/180 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++R+++YT V E+Q Sbjct: 20 ILENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRSFFYTGVDRTNEKQ- 78 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++V++K + + K+++DVE+AVD + ++ S Sbjct: 79 ---QGFLLWMRRNGYRVISKDLVQLPDGS----KKANLDVEIAVDMMALVGSYDTAILVS 131 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG V A+ + +V +VS +M SD L +D ++DL +K +I + Sbjct: 132 GDGDLAYAVDAVSYRGVRVEVVS----LRAMTSDSLINVSDRYIDLEQIKEDIQKTSKSP 187 >gi|240141795|ref|YP_002966303.1| hypothetical protein MexAM1_META2p0024 [Methylobacterium extorquens AM1] gi|240011737|gb|ACS42962.1| hypothetical protein DUF88 [Methylobacterium extorquens AM1] Length = 185 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 83/176 (47%), Positives = 128/176 (72%), Gaps = 3/176 (1%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 + A+FIDGANLY+++KA+GFDIDY+KLL ++ ++R YYT + D ++S L PL Sbjct: 5 RTAVFIDGANLYSTTKAIGFDIDYKKLLAHYKRDG-LLRINYYTALYDD--GEYSSLRPL 61 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126 LDWL YNG++V++K AKE+T++ GR++ K ++D+E+AVDA E + ++ +V+FSGDG F Sbjct: 62 LDWLDYNGYRVISKPAKEWTDSAGRRKTKGNLDIEIAVDALELAPHIDRMVLFSGDGDFR 121 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182 LV A+QR+ +V +VST+ + P+M SD+LRRQAD F+DLA + I + + + Sbjct: 122 YLVEAMQRRGVRVVVVSTIQTQPAMVSDELRRQADEFVDLAKMMETIGQTDTDRPQ 177 >gi|158335465|ref|YP_001516637.1| hypothetical protein AM1_2313 [Acaryochloris marina MBIC11017] gi|158305706|gb|ABW27323.1| conserved hypothetical protein [Acaryochloris marina MBIC11017] Length = 210 Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats. Identities = 56/178 (31%), Positives = 93/178 (52%), Gaps = 12/178 (6%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + R +IA+FIDG+NL+ ++ LG +IDY KLL + ++R+++YT V E+Q Sbjct: 19 LENRGRIAIFIDGSNLFYAALQLGIEIDYTKLLCRLTCGSRLLRSFFYTGVDPTNEKQ-- 76 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 L W+ NG++V+ K + + K+++DVE+AVD + ++ SG Sbjct: 77 --QGFLLWMRRNGYRVITKELVQLPDGS----KKANLDVEIAVDMMSLVGCYDTAILVSG 130 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 DG V A+ + +V +VS SM SD L AD ++DL +K +I + Sbjct: 131 DGDLAYAVDAVSYRGIRVEVVS----LRSMTSDSLINVADRYIDLEGIKGDIQKASRS 184 >gi|119512208|ref|ZP_01631298.1| hypothetical protein N9414_13695 [Nodularia spumigena CCY9414] gi|119463174|gb|EAW44121.1| hypothetical protein N9414_13695 [Nodularia spumigena CCY9414] Length = 209 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 56/178 (31%), Positives = 98/178 (55%), Gaps = 12/178 (6%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++R+++YT V E+Q Sbjct: 17 LENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRSFFYTGVDRTNEKQ-- 74 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 L W+ NG++V+AK + + K+++DVE+AVD + + V+ SG Sbjct: 75 --QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDMMALVDSYDTAVLVSG 128 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 DG V ++ + +V +VS SM SD L +D ++DL +K +I ++P + Sbjct: 129 DGDLAYAVNSVSYRGVRVEVVS----LRSMTSDSLINVSDRYIDLEAIKEDIQKNPRQ 182 >gi|254424426|ref|ZP_05038144.1| conserved hypothetical protein [Synechococcus sp. PCC 7335] gi|196191915|gb|EDX86879.1| conserved hypothetical protein [Synechococcus sp. PCC 7335] Length = 211 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 57/179 (31%), Positives = 94/179 (52%), Gaps = 12/179 (6%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + R ++A+FIDG+NL+ ++ LG +IDY KLL S + + R+++YT V E+Q Sbjct: 20 LENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLSRLTSGSRLFRSFFYTGVDRSNEKQ-- 77 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 L W+ NG++V+AK + + K+++DVE+AVD + V+ SG Sbjct: 78 --QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDMMALVGCYDTAVLVSG 131 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 DG V A K +V +VS +M SD L +D ++DL +K +I + + Sbjct: 132 DGDLAYAVDAASYKGVRVEVVS----LRAMTSDSLINVSDRYIDLDSIKEDICKTSRAN 186 >gi|226356860|ref|YP_002786600.1| hypothetical protein Deide_18580 [Deinococcus deserti VCD115] gi|226318850|gb|ACO46846.1| Conserved hypothetical protein [Deinococcus deserti VCD115] Length = 197 Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats. Identities = 57/181 (31%), Positives = 97/181 (53%), Gaps = 11/181 (6%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 E+IALFIDGAN+YA++K LG++ D+RK+L+ F ++ + A+YYT V + + Sbjct: 1 MERIALFIDGANVYAAAKRLGWNFDHRKILEHFAAQGRLYNAFYYTAVPMPIDDKQKR-- 58 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 D L Y G+ V + +E T+ G ++++DVE+ D ++ + V+ +GDG Sbjct: 59 -FTDALTYMGYTVRTRPLRESTDEHGDTSRRANLDVEIVTDLLTTADRYDTAVLLTGDGD 117 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD----PDED 180 F V L+ + K+V + S M S +LR AD ++D ++ + R P E Sbjct: 118 FERPVEVLRARGKRVVVASIA----EMTSYELRNAADEYVDFKDIRVHVERPGYRLPSEQ 173 Query: 181 K 181 + Sbjct: 174 R 174 >gi|300867847|ref|ZP_07112489.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506] gi|300334178|emb|CBN57665.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506] Length = 201 Score = 154 bits (389), Expect = 6e-36, Method: Composition-based stats. Identities = 56/179 (31%), Positives = 96/179 (53%), Gaps = 12/179 (6%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + R ++A+FIDG+NL+ ++ LG +IDY KLL + + ++R+++YT V E+Q Sbjct: 17 LENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTAGSRLLRSFFYTGVDRTNEKQ-- 74 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 L W+ NG++V++K + + K+++DVE+AVD + V+ SG Sbjct: 75 --QGFLLWMRRNGYRVISKDLVQLPDGS----KKANLDVEIAVDMMALVGSYDTAVLVSG 128 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 DG V A+ + +V +VS SM SD L AD ++DL +K +I + + Sbjct: 129 DGDLAYAVDAVSYRGVRVEVVS----LRSMTSDSLINVADRYIDLESIKEDIQKTNRPN 183 >gi|320335491|ref|YP_004172202.1| hypothetical protein Deima_2908 [Deinococcus maricopensis DSM 21211] gi|319756780|gb|ADV68537.1| Domain of unknown function DUF88 [Deinococcus maricopensis DSM 21211] Length = 192 Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 57/181 (31%), Positives = 97/181 (53%), Gaps = 11/181 (6%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 E+I LFIDGAN+YA++K LG++ D+RK+L+ F + A+YYT V + + Sbjct: 1 MERIGLFIDGANVYAAAKRLGWNFDHRKILEHFAGYGRLYNAFYYTAVPTPVDDKQKR-- 58 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 +D L Y G+ V K+ +E T+ G ++++D+ L D ++ + ++ +GDG Sbjct: 59 -FIDALTYMGYTVRTKMLRENTDEHGDTHRRANLDILLVTDLLATADLYDTAILLTGDGD 117 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD----PDED 180 F V L+ K K+V + S P M S +LR AD ++D ++ ++ R P E Sbjct: 118 FERPVEVLRAKGKRVIVASI----PEMTSYELRNAADAYVDFKDIRGDVERPGYRLPSEG 173 Query: 181 K 181 + Sbjct: 174 R 174 >gi|218437105|ref|YP_002375434.1| hypothetical protein PCC7424_0096 [Cyanothece sp. PCC 7424] gi|218169833|gb|ACK68566.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7424] Length = 201 Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 58/179 (32%), Positives = 95/179 (53%), Gaps = 12/179 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + R ++A+FIDG+NL+ ++ LG +IDY KLL + + ++RA++YT V E+Q Sbjct: 16 ILENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLYRLTNGSKLLRAFFYTGVDRSNEKQ- 74 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++V+AK + + K+++DVE+AVD + VI S Sbjct: 75 ---QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDLMSLVGSYDTAVIVS 127 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG A+ + +V +VS SM SD L AD ++DL +K +I + Sbjct: 128 GDGDLAYAANAVSYQGARVEVVS----LRSMTSDSLINVADRYVDLDQIKEDIQKHQKA 182 >gi|307151237|ref|YP_003886621.1| hypothetical protein Cyan7822_1345 [Cyanothece sp. PCC 7822] gi|306981465|gb|ADN13346.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7822] Length = 222 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 58/179 (32%), Positives = 95/179 (53%), Gaps = 12/179 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + R ++A+FIDG+NL+ ++ LG +IDY KLL + + ++RA++YT V E+Q Sbjct: 37 ILENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLFRLTNGSKLLRAFFYTGVDRSNEKQ- 95 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++V+AK + + K+++DVE+AVD + VI S Sbjct: 96 ---QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDLMSLVGSYDTAVIVS 148 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 GDG A+ + +V +VS SM SD L AD ++DL +K +I + Sbjct: 149 GDGDLAYAANAVSYRGARVEVVS----LRSMTSDSLINVADRYVDLDQIKEDIQKHAKA 203 >gi|166367025|ref|YP_001659298.1| hypothetical protein MAE_42840 [Microcystis aeruginosa NIES-843] gi|166089398|dbj|BAG04106.1| hypothetical protein MAE_42840 [Microcystis aeruginosa NIES-843] Length = 201 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 58/177 (32%), Positives = 94/177 (53%), Gaps = 12/177 (6%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + R ++A+FIDG+NL+ ++ LG +IDY KLL + + ++RA++YT V E+Q Sbjct: 17 LENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTAGSRLLRAFFYTGVDRTNEKQ-- 74 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 L W+ NG++V+AK + + K+++DVE+AVD + VI SG Sbjct: 75 --QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDLMALVGSYDTAVIVSG 128 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 DG ++ + +V +VS SM SD L AD ++DL +K EI + Sbjct: 129 DGDLAYAADSVSYRGARVEVVS----LRSMTSDSLINVADRYVDLDQIKEEIQKTSK 181 >gi|172036862|ref|YP_001803363.1| hypothetical protein cce_1947 [Cyanothece sp. ATCC 51142] gi|171698316|gb|ACB51297.1| unknown [Cyanothece sp. ATCC 51142] Length = 225 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 55/179 (30%), Positives = 94/179 (52%), Gaps = 12/179 (6%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++RA++YT V E+Q Sbjct: 42 LENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLYRLTEGSRLLRAFFYTGVDRTNEKQ-- 99 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 L W+ NG++V+AK + + K+++DVE+AVD + +I SG Sbjct: 100 --QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDLMALVGSYDTAIIVSG 153 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 DG ++ + ++ +VS SM SD L AD ++DL +K +I + + Sbjct: 154 DGDLAYAADSVSYRGARIEVVS----LRSMTSDSLINVADRYIDLDQIKEDIQKTRKPN 208 >gi|159029235|emb|CAO87595.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length = 201 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 58/177 (32%), Positives = 94/177 (53%), Gaps = 12/177 (6%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + R ++A+FIDG+NL+ ++ LG +IDY KLL + + ++RA++YT V E+Q Sbjct: 17 LENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTAGSRLLRAFFYTGVDRTNEKQ-- 74 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 L W+ NG++V+AK + + K+++DVE+AVD + VI SG Sbjct: 75 --QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDLMALVGSYDTAVIVSG 128 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 DG ++ + +V +VS SM SD L AD ++DL +K EI + Sbjct: 129 DGDLAYAADSVSYRGARVEVVS----LRSMTSDSLINVADRYVDLDQIKEEIQKTSK 181 >gi|126656216|ref|ZP_01727600.1| hypothetical protein CY0110_03999 [Cyanothece sp. CCY0110] gi|126622496|gb|EAZ93202.1| hypothetical protein CY0110_03999 [Cyanothece sp. CCY0110] Length = 225 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 55/179 (30%), Positives = 94/179 (52%), Gaps = 12/179 (6%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++RA++YT V E+Q Sbjct: 42 LENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLYRLTEGSRLLRAFFYTGVDRTNEKQ-- 99 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 L W+ NG++V+AK + + K+++DVE+AVD + +I SG Sbjct: 100 --QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDLMALVGSYDTAIIVSG 153 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 DG ++ + ++ +VS SM SD L AD ++DL +K +I + + Sbjct: 154 DGDLAYAADSVSYRGARIEVVS----LRSMTSDSLINVADRYIDLDQIKEDIQKTRKPN 208 >gi|170079300|ref|YP_001735938.1| hypothetical protein SYNPCC7002_A2707 [Synechococcus sp. PCC 7002] gi|169886969|gb|ACB00683.1| conserved hypothetical protein [Synechococcus sp. PCC 7002] Length = 204 Score = 152 bits (383), Expect = 3e-35, Method: Composition-based stats. Identities = 56/179 (31%), Positives = 94/179 (52%), Gaps = 12/179 (6%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + R ++A+FIDG+NL+ ++ LG +IDY KLL + ++R+++YT V E+Q Sbjct: 17 LENRGRVAIFIDGSNLFYAALQLGIEIDYSKLLYRLTGGSRLLRSFFYTGVDRANEKQ-- 74 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 L W+ NG++V+AK + + K+++DVE+AVD + V+ SG Sbjct: 75 --QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDMMALVGSYDTAVLVSG 128 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 DG V A+ + +V +VS SM SD L AD ++DL ++ +I + Sbjct: 129 DGDLAYAVDAVSYRGARVEVVS----LRSMTSDSLINVADRYIDLEQIQTDIQKLHRGQ 183 >gi|186686260|ref|YP_001869456.1| hypothetical protein Npun_R6229 [Nostoc punctiforme PCC 73102] gi|186468712|gb|ACC84513.1| protein of unknown function DUF88 [Nostoc punctiforme PCC 73102] Length = 231 Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats. Identities = 59/173 (34%), Positives = 92/173 (53%), Gaps = 12/173 (6%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 R ++A+FIDG NL+ ++ LG +IDY KLL + + ++RA++YT V E+Q Sbjct: 56 NRGRVAIFIDGLNLFHTALQLGIEIDYVKLLCHLTNGSRLLRAFFYTGVDNSNEKQ---- 111 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L W+ NG++VVAK + KS+++VE+AVD + + V+ SGDG Sbjct: 112 QGFLLWMRRNGYRVVAKDIMQ----PAENFKKSNLNVEIAVDMITLAPYYDTAVLVSGDG 167 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 V A+ R +V +VS + S+ L AD F+DL +K I +D Sbjct: 168 DLAYAVNAVSRMGVRVEVVSLQTT----TSESLIDVADCFIDLDSIKAHIQKD 216 >gi|254510985|ref|ZP_05123052.1| hypothetical protein RKLH11_1520 [Rhodobacteraceae bacterium KLH11] gi|221534696|gb|EEE37684.1| hypothetical protein RKLH11_1520 [Rhodobacteraceae bacterium KLH11] Length = 183 Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats. Identities = 73/178 (41%), Positives = 113/178 (63%), Gaps = 2/178 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 MF E A+F+DG NL+ S+KALGFD+DY +L + ++RA Y+T ++ ++ Sbjct: 3 MFHQNETTAIFVDGYNLHHSAKALGFDVDYERLKSMVEKQCHLLRATYFTMLIE--RDEY 60 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 PL+D+L YNG+ V AK A+EF GR R K ++V+LA+ A + + H V+F+ Sbjct: 61 IATRPLVDFLQYNGWTVTAKDAREFVHGDGRSRFKGRIEVDLALAAARITPHINHAVLFT 120 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 G F LV LQ + +V++VST+ ++P +ASDQLRR+AD F++LA +++ IAR Sbjct: 121 GSQDFCPLVEYLQDQGVRVSVVSTIKTEPILASDQLRRKADKFIELADIRDVIARPDR 178 >gi|6136304|gb|AAF04325.1| unknown [Bradyrhizobium japonicum] Length = 149 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 78/138 (56%), Positives = 108/138 (78%), Gaps = 2/138 (1%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 P KIALFIDGANLYA++K LGFDIDY++LLK F+SR ++RA+YYT ++ D Q++S + Sbjct: 5 PTNKIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLLRAFYYTAIIED--QEYSSI 62 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 PL+DWL YNG+ VV K KEF + GR++VK +MD+ELAVDA E +E ++ +V+FSGDG Sbjct: 63 RPLIDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFSGDG 122 Query: 124 CFTTLVAALQRKVKKVTI 141 F +LV A+QR+ +VT+ Sbjct: 123 DFRSLVEAVQRRGVRVTV 140 >gi|325282672|ref|YP_004255213.1| hypothetical protein Deipr_0426 [Deinococcus proteolyticus MRP] gi|324314481|gb|ADY25596.1| Domain of unknown function DUF88 [Deinococcus proteolyticus MRP] Length = 214 Score = 148 bits (374), Expect = 3e-34, Method: Composition-based stats. Identities = 54/173 (31%), Positives = 92/173 (53%), Gaps = 7/173 (4%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 ++IALF+DGA++Y+++K LG++ D+RK+L+ FR R + A+YYT + + + Sbjct: 2 NSQRIALFVDGASIYSAAKRLGWNFDHRKVLEYFRERGRLHNAFYYTALPAQFDDKQKR- 60 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 D L Y G+ V + +E + G ++S+D+EL D + + V+ SG G Sbjct: 61 --FTDALTYMGYTVRTQPLRETVDESGVSYRQTSLDIELVTDLLTGLDHFDAAVLMSGGG 118 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 F + L+ + K+ +VS P M S +LR AD ++DL L+ R Sbjct: 119 GFERPLEVLRARGKRTVVVSI----PEMTSYELRNAADEYLDLRDLRQRFERP 167 >gi|300712124|ref|YP_003737938.1| hypothetical protein HacjB3_13825 [Halalkalicoccus jeotgali B3] gi|299125807|gb|ADJ16146.1| hypothetical protein HacjB3_13825 [Halalkalicoccus jeotgali B3] Length = 165 Score = 148 bits (373), Expect = 3e-34, Method: Composition-based stats. Identities = 41/170 (24%), Positives = 80/170 (47%), Gaps = 14/170 (8%) Query: 3 DPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 P +++A+ +D NLY S+ + +IDY LL+ ++RA Y PE++ Sbjct: 5 HPNQRVAVLVDSQNLYHSAHSLYSRNIDYSALLEEAVGGRELVRAIAYVIRADSPEEES- 63 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 + L GF+ K K F + K+ DV +++DA + ++ +V+ +G Sbjct: 64 ----FFEALIDIGFETKIKDIKTFGDGS----KKADWDVGMSLDAVTLASHVDTVVLCTG 115 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 DG F+ L + L+ + +V +++ +++L D F+DL + Sbjct: 116 DGDFSRLCSHLRHQGVRVEVMALG----PSTAEELIEATDSFVDLTDREE 161 >gi|86607727|ref|YP_476489.1| hypothetical protein CYB_0228 [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556269|gb|ABD01226.1| conserved hypothetical protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 200 Score = 148 bits (373), Expect = 4e-34, Method: Composition-based stats. Identities = 60/176 (34%), Positives = 98/176 (55%), Gaps = 12/176 (6%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 D R ++A+FIDG+NL+ ++ LG +IDY +LLK R+ ++R+++YT V + E+Q Sbjct: 18 DNRGRVAIFIDGSNLFYAALQLGIEIDYTRLLKTLSGRSPLLRSFFYTGVDRNNEKQ--- 74 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 L W+ NG++VV K + + ++++DVE+AVD E V+ SGD Sbjct: 75 -QGFLLWMRRNGYRVVTKELTQLPDGS----KRANLDVEIAVDMLSLVRWYETAVLVSGD 129 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 G V A+ + +V +VS SM SDQL AD ++DL +K++I + Sbjct: 130 GDLAYAVNAVSYQGARVEVVS----LRSMTSDQLINLADRYIDLESIKDQIKKTNR 181 >gi|113969424|ref|YP_733217.1| hypothetical protein Shewmr4_1080 [Shewanella sp. MR-4] gi|113884108|gb|ABI38160.1| protein of unknown function DUF88 [Shewanella sp. MR-4] Length = 184 Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats. Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 13/167 (7%) Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 +P ++IALF+D N+Y + + A +Y KL + ++ ++ A Y GD Q Sbjct: 26 NPLKRIALFVDVQNIYYTCREAYQRQFNYCKLWQQLSAQGEIVSAIAYAIHRGDDGQ--- 82 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 D L + GF++ K + ++ K DV + +D E + ++ +++ SG Sbjct: 83 --LKFQDALRHIGFELKLKPFIQRSDGSA----KGDWDVGITIDVLEMAPEVDTVILLSG 136 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 DG F L+ +++ K I + V PS+ + L A F + Sbjct: 137 DGDFALLLDKIRQ---KYAIEAEVYGVPSLTAKSLMEAASCFHPIEE 180 >gi|86605182|ref|YP_473945.1| hypothetical protein CYA_0464 [Synechococcus sp. JA-3-3Ab] gi|86553724|gb|ABC98682.1| conserved hypothetical protein [Synechococcus sp. JA-3-3Ab] Length = 198 Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats. Identities = 59/176 (33%), Positives = 98/176 (55%), Gaps = 12/176 (6%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 D R ++A+FIDG+NL+ ++ +G +IDY +LLK R+ ++R+++YT V + E+Q Sbjct: 18 DDRGRVAIFIDGSNLFYAALQMGIEIDYTRLLKTLTGRSPLLRSFFYTGVDRNNEKQ--- 74 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 L W+ NG++VV K + + ++++DVE+AVD E V+ SGD Sbjct: 75 -QGFLLWMRRNGYRVVTKELTQLPDGS----KRANLDVEIAVDMLSLVRWYETAVLVSGD 129 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 G V A+ + +V +VS SM SDQL AD ++DL +K++I + Sbjct: 130 GDLAYAVNAVSYQGARVEVVS----LRSMTSDQLINLADRYIDLESIKDQIKKTNR 181 >gi|284164086|ref|YP_003402365.1| hypothetical protein Htur_0796 [Haloterrigena turkmenica DSM 5511] gi|284013741|gb|ADB59692.1| protein of unknown function DUF88 [Haloterrigena turkmenica DSM 5511] Length = 165 Score = 145 bits (365), Expect = 3e-33, Method: Composition-based stats. Identities = 43/167 (25%), Positives = 82/167 (49%), Gaps = 14/167 (8%) Query: 3 DPREKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 P +++A+ +D NLY ++++L +IDY LL + RA Y PE++ Sbjct: 5 HPGQRVAVLVDAQNLYHTAQSLHSRNIDYSALLDKAVQDRQLTRAIAYVIRADSPEEES- 63 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 + L GF+ K K F++ K+ DV +++DA + ++ +V+ +G Sbjct: 64 ----FFEALIDIGFEPKIKDIKTFSDGT----KKADWDVGMSLDAVTLANHVDTVVLCTG 115 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 DG F+ L + L+ + +V +++ S +++L AD F+DL Sbjct: 116 DGDFSRLCSHLRHEGVRVEVMAF----ESSTAEELIAAADSFVDLGE 158 >gi|110667467|ref|YP_657278.1| hypothetical protein HQ1506A [Haloquadratum walsbyi DSM 16790] gi|109625214|emb|CAJ51634.1| conserved hypothetical protein [Haloquadratum walsbyi DSM 16790] Length = 165 Score = 145 bits (365), Expect = 3e-33, Method: Composition-based stats. Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 14/166 (8%) Query: 3 DPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 P +++A+ D NLY ++++ IDY LLK S + RA Y PE++ Sbjct: 5 HPGQRVAVLADAQNLYHTAQSLYSQKIDYGSLLKKGVSGRELTRAIAYVIQADAPEEE-- 62 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 + L GF+ K K F + K+ DV +++DA + ++ +V+ +G Sbjct: 63 ---TFFEALVDIGFEPKIKQIKTFGDGT----KKADWDVGMSLDAVTLANHVDTVVLCTG 115 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 DG F+ L + L+ + +V ++S +D+L AD F+DL+ Sbjct: 116 DGDFSRLCSHLRHEGVRVEVMSF----RESTADELVDAADTFIDLS 157 >gi|17232221|ref|NP_488769.1| hypothetical protein all4729 [Nostoc sp. PCC 7120] gi|75908164|ref|YP_322460.1| hypothetical protein Ava_1943 [Anabaena variabilis ATCC 29413] gi|17133866|dbj|BAB76428.1| all4729 [Nostoc sp. PCC 7120] gi|75701889|gb|ABA21565.1| Protein of unknown function DUF88 [Anabaena variabilis ATCC 29413] Length = 236 Score = 144 bits (363), Expect = 5e-33, Method: Composition-based stats. Identities = 57/178 (32%), Positives = 91/178 (51%), Gaps = 14/178 (7%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTT-----VVGDPEQ 58 R ++A+FIDGANL+ ++ LG +IDY KLL + + ++RA++YT ++ Sbjct: 53 NRGRVAIFIDGANLFQAALQLGIEIDYLKLLCRLTAGSRLLRAFFYTGVDMSRPTPTRQR 112 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVI 118 L W+ NG++VV K + N K +++VE+AVD + + V+ Sbjct: 113 TNDKQQGFLFWMRRNGYRVVTKELQVTDNN-----KKPNLNVEIAVDMITLAPHYDTAVL 167 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 SGDG V A+ +V +VS +M +D L ADYF+DL +K I +D Sbjct: 168 VSGDGDLAYAVNAVSSTGVRVEVVS----LRTMTNDCLIDVADYFIDLDSIKQYIQKD 221 >gi|289582398|ref|YP_003480864.1| hypothetical protein Nmag_2746 [Natrialba magadii ATCC 43099] gi|289531951|gb|ADD06302.1| protein of unknown function DUF88 [Natrialba magadii ATCC 43099] Length = 165 Score = 144 bits (363), Expect = 6e-33, Method: Composition-based stats. Identities = 45/167 (26%), Positives = 81/167 (48%), Gaps = 14/167 (8%) Query: 3 DPREKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 P +++A+ +D NLY S+++L +IDY LL + RA Y PE++ Sbjct: 5 HPGQRVAVLVDAQNLYHSAQSLHSRNIDYSALLSKAVQDRQLTRAIAYVIRADAPEEES- 63 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 D L GF+ K K F++ K+ DV +++DA + ++ +V+ +G Sbjct: 64 ----FFDALVDIGFETKIKDIKTFSDGT----KKADWDVGMSLDAVTLANHVDTVVLCTG 115 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 DG F+ L + L+ + +V +++ S +D+L D F+DL Sbjct: 116 DGDFSRLCSHLRHEGVRVEVMAF----ESSTADELIDATDTFLDLDE 158 >gi|119776250|ref|YP_928990.1| hypothetical protein Sama_3118 [Shewanella amazonensis SB2B] gi|119768750|gb|ABM01321.1| conserved hypothetical protein [Shewanella amazonensis SB2B] Length = 157 Score = 144 bits (362), Expect = 7e-33, Method: Composition-based stats. Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 13/165 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIALF+D N+Y + + A +YRKL + S ++ A Y D Q Sbjct: 1 MKKIALFVDVQNIYYTCREAYQRQFNYRKLWQQLCSEGEIVSATAYAIHRSDDGQ----- 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 D L + GF++ K + ++ K DV + +D E + ++ +++ SGDG Sbjct: 56 LKFQDALRHIGFELKLKPFIQRSDGSA----KGDWDVGITIDVLETAPEVDTVILLSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F L+ +++ K + + V PS+ + L A F + Sbjct: 112 DFALLLDKIRQ---KYAVEAEVYGVPSLTAKSLMEAASRFHPIDE 153 >gi|313127027|ref|YP_004037297.1| hypothetical protein Hbor_22910 [Halogeometricum borinquense DSM 11551] gi|312293392|gb|ADQ67852.1| uncharacterized conserved protein [Halogeometricum borinquense DSM 11551] Length = 165 Score = 143 bits (360), Expect = 1e-32, Method: Composition-based stats. Identities = 44/170 (25%), Positives = 82/170 (48%), Gaps = 14/170 (8%) Query: 3 DPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 P +++A+ D NLY S+++ +IDY LL+ S + RA Y PE++ Sbjct: 5 HPGQRVAILADAQNLYHSAQSLYSRNIDYSSLLEKGVSDRTLTRAIAYVVRADSPEEES- 63 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 D L GF+ K K F + K+ DV +++DA + ++ +V+ +G Sbjct: 64 ----FFDALVEIGFETKIKDIKTFGDGS----KKADWDVGMSLDAVTLANHVDTVVLCTG 115 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 DG F+ L + L+ + +V +++ +D+L AD F+D++ + Sbjct: 116 DGDFSRLCSHLRHEGVRVEVIAF----KESTADELIEAADTFLDMSDRQE 161 >gi|218514126|ref|ZP_03510966.1| hypothetical protein Retl8_10672 [Rhizobium etli 8C-3] Length = 149 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 80/136 (58%), Positives = 108/136 (79%), Gaps = 2/136 (1%) Query: 45 RAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAV 104 RAYYYT ++ D Q++S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+ Sbjct: 1 RAYYYTALIED--QEYSSIRPLIDWLDYNGYKVVTKPAKEFTDSMGRRKIKGNMDIELAI 58 Query: 105 DAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 DA EQSE ++HLVIFSGDG FT LV ALQR+ +KV+++ST+ + P M +D LRRQAD+F+ Sbjct: 59 DAMEQSETVDHLVIFSGDGDFTNLVEALQRRGRKVSVISTMATQPPMIADDLRRQADHFI 118 Query: 165 DLAYLKNEIARDPDED 180 DL LK EI RDP E Sbjct: 119 DLLSLKAEIGRDPSER 134 >gi|127512105|ref|YP_001093302.1| hypothetical protein Shew_1173 [Shewanella loihica PV-4] gi|126637400|gb|ABO23043.1| protein of unknown function DUF88 [Shewanella loihica PV-4] Length = 157 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 39/164 (23%), Positives = 73/164 (44%), Gaps = 13/164 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 ++IALF+D N+Y + + A G +Y + + + ++ A Y GD Q Sbjct: 1 MKRIALFVDVQNIYYTCRQAYGRQFNYHAMWQRLNEQGEIVTALAYAIDRGDDGQ----- 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 D L + GF+V K + ++ K DV + +D E + ++ +V+ SGDG Sbjct: 56 IKFQDALKHIGFEVKLKPYIQRSDGSA----KGDWDVGITIDIMEHAPEVDTVVLLSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ + +K ++ + V P +++ L A F + Sbjct: 112 DFALLLEHI---GRKYSLETEVYGVPELSAKALMDAATQFHPIE 152 >gi|114046654|ref|YP_737204.1| hypothetical protein Shewmr7_1148 [Shewanella sp. MR-7] gi|113888096|gb|ABI42147.1| protein of unknown function DUF88 [Shewanella sp. MR-7] Length = 157 Score = 142 bits (358), Expect = 2e-32, Method: Composition-based stats. Identities = 41/163 (25%), Positives = 76/163 (46%), Gaps = 13/163 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIALF+D N+Y + + A +YRKL + ++ ++ A Y GD Q Sbjct: 1 MKKIALFVDVQNIYYTCREAYQRQFNYRKLWQQLSTQGEIVSAIAYAIHRGDDGQ----- 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 D L + GF++ K + ++ K DV + +D E + ++ +++ SGDG Sbjct: 56 LKFQDALRHIGFELKLKPFIQRSDGSA----KGDWDVGITIDVLEMAPEVDTVILLSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 F L+ +++ K + + V PS+ + L A F+ + Sbjct: 112 DFALLLDKIRQ---KYAVEAEVYGVPSLTAKSLMDAATQFIPI 151 >gi|292655260|ref|YP_003535157.1| hypothetical protein HVO_1102 [Haloferax volcanii DS2] gi|291371756|gb|ADE03983.1| Uncharacterized conserved protein [Haloferax volcanii DS2] Length = 165 Score = 142 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 43/170 (25%), Positives = 80/170 (47%), Gaps = 14/170 (8%) Query: 3 DPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 P +++A+ D NLY ++++ +IDY LL+ + + RA Y P++ Sbjct: 5 HPDQRVAILADAQNLYHTAQSLYSRNIDYSSLLQKGTAGRALTRAIAYVIRADSPDE--- 61 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 D L GF+ K K F + K+ D+ +A+DA ++ ++ +V+ SG Sbjct: 62 --VSFFDALVDIGFETKIKDIKTFGDGS----KKADWDLGIALDAVSLADHVDTVVLCSG 115 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 DG F L L+ + +V +++ +++L AD F+DL+ K Sbjct: 116 DGDFERLCTHLRHEGVRVEVMAF----KESTAEELVAAADTFIDLSERKE 161 >gi|146293884|ref|YP_001184308.1| hypothetical protein Sputcn32_2790 [Shewanella putrefaciens CN-32] gi|145565574|gb|ABP76509.1| protein of unknown function DUF88 [Shewanella putrefaciens CN-32] Length = 157 Score = 142 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 13/165 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIALF+D N+Y + + A G +YRKL + ++ A Y GD Q Sbjct: 1 MKKIALFVDVQNIYYTCREAYGRQFNYRKLWQHLGYEGDIVLAVAYAIHKGDDGQ----- 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 D L + GF+V K + ++ K DV + +D E + ++ +++ SGDG Sbjct: 56 LKFQDALKHIGFEVKLKPFIQRSDGSA----KGDWDVGITIDIMEAASEVDTVILLSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F L LQ+ +K + + V P++ + LR A F + Sbjct: 112 DFDLL---LQKIHQKYGVETQVYGVPTLTAKSLRDAASQFHPIDE 153 >gi|319427256|gb|ADV55330.1| conserved hypothetical protein [Shewanella putrefaciens 200] Length = 157 Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats. Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 13/165 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIALF+D N+Y + + A G +YRKL + ++ A Y GD Q Sbjct: 1 MKKIALFVDVQNIYYTCREAYGRQFNYRKLWQHLGYEGDIVLAVAYAIHKGDDGQ----- 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 D L + GF+V K + ++ K DV + +D E + ++ +++ SGDG Sbjct: 56 LKFQDALKHIGFEVKLKPFIQRSDGSA----KGDWDVGITIDIMEAASEVDTVILLSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F L LQ+ +K + + V P++ + LR A F + Sbjct: 112 DFDLL---LQKIHQKYWVETQVYGVPTLTAKSLRDAASQFHPIDE 153 >gi|37521016|ref|NP_924393.1| hypothetical protein glr1447 [Gloeobacter violaceus PCC 7421] gi|35212012|dbj|BAC89388.1| glr1447 [Gloeobacter violaceus PCC 7421] Length = 190 Score = 141 bits (356), Expect = 4e-32, Method: Composition-based stats. Identities = 53/175 (30%), Positives = 90/175 (51%), Gaps = 10/175 (5%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 ++++++FIDG N++ + ++ G+ D RK+L+ F ++ A++YT + Sbjct: 5 YRQDRVSIFIDGNNMFYAQRSNGWFFDPRKVLEYFNRHEALVNAFWYTGIRDP-----QD 59 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 D L GF V K KE+ + G K+++D+E+ VD F H V+FSG Sbjct: 60 QRGFRDALIAMGFTVREKFLKEYYDRLSGEMTQKANLDIEIVVDMFNTVAQYNHAVLFSG 119 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 DG F V L+ K ++T+VST M + +LR AD ++DL L+ I + Sbjct: 120 DGDFERAVELLRSKDTRITVVST----EGMIARELRNAADRYIDLNDLRPFIEKT 170 >gi|119509873|ref|ZP_01629016.1| hypothetical protein N9414_11729 [Nodularia spumigena CCY9414] gi|119465482|gb|EAW46376.1| hypothetical protein N9414_11729 [Nodularia spumigena CCY9414] Length = 236 Score = 141 bits (355), Expect = 4e-32, Method: Composition-based stats. Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 14/180 (7%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + R ++A+FIDG +L+ ++ LG +IDY KLL + ++RA++YT + Sbjct: 51 LENRGRVAIFIDGVSLFHTALQLGIEIDYLKLLCHLTGGSRLLRAFFYTAIDTSRPNAAR 110 Query: 62 -----PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHL 116 L W+ NG++VV K + K +++VE+AVD + + Sbjct: 111 PRPNEKQQGFLFWMRRNGYRVVTKEVQ-----LADHTKKHNLNVEIAVDMITLAPYYDTA 165 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 ++ SGD V A+ +V +VS ++ SD L AD F+DL +K I +D Sbjct: 166 ILVSGDRDLAYAVNAVSATGSRVEVVS----LRALTSDSLIDVADEFIDLDRIKQYIQKD 221 >gi|120598045|ref|YP_962619.1| hypothetical protein Sputw3181_1222 [Shewanella sp. W3-18-1] gi|120558138|gb|ABM24065.1| protein of unknown function DUF88 [Shewanella sp. W3-18-1] Length = 157 Score = 140 bits (354), Expect = 6e-32, Method: Composition-based stats. Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 13/165 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIALF+D N+Y + + A G +YRKL + ++ A Y GD Q Sbjct: 1 MKKIALFVDVQNIYYTCREAYGRQFNYRKLWQHLGYEGDIVLAVAYAIHKGDDGQ----- 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 D L + GF+V K + ++ K DV + +D E + ++ +++ SGDG Sbjct: 56 LKFQDALKHIGFEVKLKPFIQRSDGSA----KGDWDVGITIDIMEAASEVDTVILLSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F L LQ+ +K + + V P++ + LR A F + Sbjct: 112 DFDLL---LQKIYQKYGVETQVYGVPTLTAKSLRDAASQFHPIDE 153 >gi|117919529|ref|YP_868721.1| hypothetical protein Shewana3_1080 [Shewanella sp. ANA-3] gi|117611861|gb|ABK47315.1| protein of unknown function DUF88 [Shewanella sp. ANA-3] Length = 170 Score = 140 bits (353), Expect = 8e-32, Method: Composition-based stats. Identities = 43/167 (25%), Positives = 77/167 (46%), Gaps = 13/167 (7%) Query: 1 MFDPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 + P +KIALF+D N+Y + + A +YRKL + ++ ++ A Y GD Q Sbjct: 10 ITYPLKKIALFVDVQNIYYTCREAYQRQFNYRKLWQQLSAQGEIVSAIAYAIHRGDDGQ- 68 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119 D L + GF++ K + ++ K DV + +D E + ++ +++ Sbjct: 69 ----LKFQDALRHIGFELKLKPFIQRSDGSA----KGDWDVGITIDVLEMAPEVDTVILL 120 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 SGDG F L+ +++ K I + V PS+ + L A F + Sbjct: 121 SGDGDFALLLDKIRQ---KYAIEAEVYGVPSLTAKSLMDAATRFTPI 164 >gi|22298340|ref|NP_681587.1| hypothetical protein tll0798 [Thermosynechococcus elongatus BP-1] gi|22294519|dbj|BAC08349.1| tll0798 [Thermosynechococcus elongatus BP-1] Length = 176 Score = 140 bits (353), Expect = 9e-32, Method: Composition-based stats. Identities = 48/178 (26%), Positives = 92/178 (51%), Gaps = 12/178 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVI--RAYYYTTVVGDPEQ 58 M +E++++FIDG N++ + + G+ D R++L+ F ++ A++YT + + Sbjct: 1 MLPAQERLSIFIDGNNMFYAQQKNGWFFDPRRVLEFFTRDPKIVLVNAFWYTGL-----K 55 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHLV 117 D L G+ V K+ KE+ + G+ K+++D+E+ +D F + +V Sbjct: 56 DMQDQRSFRDALINLGYTVRTKLLKEYYDESLGKYYQKANLDIEIVIDMFNTVGQYDRVV 115 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 +FSGDG F + L+ K +T+VST M + +LR D ++DL ++ I + Sbjct: 116 LFSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNEIRPFIEK 169 >gi|222479108|ref|YP_002565345.1| protein of unknown function DUF88 [Halorubrum lacusprofundi ATCC 49239] gi|222452010|gb|ACM56275.1| protein of unknown function DUF88 [Halorubrum lacusprofundi ATCC 49239] Length = 165 Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats. Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 14/170 (8%) Query: 3 DPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 P +++A+ D NLY S+++ +IDY LL+ + ++RA Y PE++ Sbjct: 5 HPDQRVAVLADSQNLYHSAQSVYSRNIDYSGLLEEAVNDRSLVRAIAYVIRADSPEEES- 63 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 + L GF+ K K F + K+ D+ +++DA + ++ +VI +G Sbjct: 64 ----FFEALRDIGFETKIKEIKTFADGS----KKADWDLGMSLDAVSLASHVDTVVICTG 115 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 DG F L + L+ + +V + + A+D+L AD F+DLA + Sbjct: 116 DGDFARLCSHLRHEGVRVEAMGFG----NSAADELIDAADDFVDLAEHEE 161 >gi|126175377|ref|YP_001051526.1| hypothetical protein Sbal_3176 [Shewanella baltica OS155] gi|304410207|ref|ZP_07391826.1| hypothetical protein Sbal183DRAFT_1664 [Shewanella baltica OS183] gi|307302082|ref|ZP_07581840.1| hypothetical protein Sbal175DRAFT_0340 [Shewanella baltica BA175] gi|125998582|gb|ABN62657.1| protein of unknown function DUF88 [Shewanella baltica OS155] gi|304351616|gb|EFM16015.1| hypothetical protein Sbal183DRAFT_1664 [Shewanella baltica OS183] gi|306914120|gb|EFN44541.1| hypothetical protein Sbal175DRAFT_0340 [Shewanella baltica BA175] Length = 157 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 45/165 (27%), Positives = 74/165 (44%), Gaps = 13/165 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIALF+D N+Y + + A G +YRKL + + A Y GD Q Sbjct: 1 MKKIALFVDVQNIYYTCREAYGRQFNYRKLWQHLGYEGDIALAVAYAIHKGDDGQ----- 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 D L + GF+V K + ++ K DV + +D E + ++ +++ SGDG Sbjct: 56 LKFQDALKHIGFEVKLKPFIQRSDGSA----KGDWDVGITIDIMEAASEVDTVILLSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F L LQ+ +K + + V P++ + LR A F + Sbjct: 112 DFDLL---LQKIHQKYGVETQVYGVPTLTAKSLRDAASQFHPIDE 153 >gi|110597861|ref|ZP_01386144.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031] gi|110340586|gb|EAT59069.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031] Length = 280 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 50/172 (29%), Positives = 91/172 (52%), Gaps = 9/172 (5%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 + A+FIDGANL+ + + LG+ ID+ +L+ F + + A YY ++ + Sbjct: 1 MGRAAVFIDGANLFYTQRHLGWQIDFSRLMAFFMTGYASVEANYYVPASEPVSEENAA-- 58 Query: 65 PLLDWLHYNGFQVVAKVAKEFTE-NCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L +G+++++K K+ G +K ++DVEL VDA SE + ++FSGD Sbjct: 59 -FTRVLTAHGYRIISKPVKKIVNKETGEVIMKGNLDVELVVDALIGSEHYDTFILFSGDS 117 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD-YFMDLAYLKNEIA 174 F L+ AL+ K K+V + ST +++ +L + + + DL+ L++ I Sbjct: 118 DFLPLLRALKEKGKEVIVYST----QGLSARELLAEPNVTYFDLSLLRDRIG 165 >gi|269837665|ref|YP_003319893.1| hypothetical protein Sthe_1637 [Sphaerobacter thermophilus DSM 20745] gi|269786928|gb|ACZ39071.1| protein of unknown function DUF88 [Sphaerobacter thermophilus DSM 20745] Length = 201 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 61/169 (36%), Positives = 85/169 (50%), Gaps = 14/169 (8%) Query: 1 MFDPRE--KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58 M P + K+A+F D +NLY +++ LG IDY +LL + RAY Y V D Sbjct: 1 MCRPDQFDKVAVFFDMSNLYFAARDLGIKIDYTRLLDFIVGGRRLHRAYAYMAVAPDDNT 60 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVI 118 P L WL NGF+V+ K + +++ K +D+ELAVD Q+ ++ VI Sbjct: 61 ----AVPFLTWLRRNGFRVITKTLRRYSDGT----SKGDLDMELAVDLLSQAPYIDVAVI 112 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 SGDG FT LV QR +V I ST P + L AD ++DL Sbjct: 113 VSGDGDFTYLVDRAQRLGLRVEIAST----PRYTATDLMEIADRYIDLE 157 >gi|298491324|ref|YP_003721501.1| hypothetical protein Aazo_2466 ['Nostoc azollae' 0708] gi|298233242|gb|ADI64378.1| protein of unknown function DUF88 ['Nostoc azollae' 0708] Length = 228 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 56/173 (32%), Positives = 88/173 (50%), Gaps = 12/173 (6%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 R ++A+FIDG NL+ ++ LG +IDY KLL + ++RA++YT V E+Q Sbjct: 53 NRGRVAIFIDGLNLFHAALQLGIEIDYVKLLCRLTQSSRLLRAFFYTGVDASKEKQ---- 108 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L W+ NG++VV K EN K +++VE+A+D + + V+ SGDG Sbjct: 109 QGFLLWMRRNGYRVVTKDILAVAENG----KKPNLNVEIAIDMITLAPYYDTAVLVSGDG 164 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 V A+ +V ++ + SD L ADYF+D +K I +D Sbjct: 165 DLAYAVNAVSSLGSRVEVIGLQTT----TSDTLINVADYFIDFDSVKQHIQKD 213 >gi|49081554|gb|AAT50177.1| PA3951 [synthetic construct] Length = 168 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 42/173 (24%), Positives = 71/173 (41%), Gaps = 19/173 (10%) Query: 1 MFDPR----EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGD 55 M P +KIA+F D NLY + + A G ++Y L ++ AY Y GD Sbjct: 1 MSRPESPAAKKIAVFADVQNLYYTVRQAYGCHLNYAALWADIARGGSIVEAYAYAIDRGD 60 Query: 56 PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEH 115 P L GF V K + + K DV + +D + + ++ Sbjct: 61 P-----RQQQFQQILRNLGFTVKLKPYIQRADGSA----KGDWDVGITIDVLDAAPRVDE 111 Query: 116 LVIFSGDGCFTTLVAA-LQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 +V+ SGDG F L+ ++ +V+T P + ++ L R A ++ + Sbjct: 112 VVLLSGDGDFDLLLEKVIRAHG----VVATAYGVPGLTANALIRAASRYVPIE 160 >gi|75908331|ref|YP_322627.1| hypothetical protein Ava_2110 [Anabaena variabilis ATCC 29413] gi|75702056|gb|ABA21732.1| Protein of unknown function DUF88 [Anabaena variabilis ATCC 29413] Length = 173 Score = 139 bits (350), Expect = 2e-31, Method: Composition-based stats. Identities = 50/181 (27%), Positives = 95/181 (52%), Gaps = 13/181 (7%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA---IVIRAYYYTTVVGDPE 57 M P ++++F+DG N++ + + G+ D R++L+ F++ +I A++YT + Sbjct: 1 MGSPMNRLSIFVDGNNMFYAQQKNGWFFDPRRVLEYFKNEQSETTLINAFWYTGLKDP-- 58 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHL 116 D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + + Sbjct: 59 ---QDQRGFRDALISLGYTVRTKILKEYYDDSSGRYSQKANLDIEIVVDMFNTVDQYDRV 115 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 V+FSGDG F + L+ K +T+VST M + +LR D ++DL +++ I + Sbjct: 116 VLFSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDRIEKA 171 Query: 177 P 177 Sbjct: 172 E 172 >gi|332306977|ref|YP_004434828.1| hypothetical protein Glaag_2619 [Glaciecola agarilytica 4H-3-7+YE-5] gi|332174306|gb|AEE23560.1| hypothetical protein Glaag_2619 [Glaciecola agarilytica 4H-3-7+YE-5] Length = 158 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 40/161 (24%), Positives = 76/161 (47%), Gaps = 13/161 (8%) Query: 7 KIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 KIA+F+D N+Y +++ + +YRK + ++ ++ A Y T D +QQ Sbjct: 4 KIAVFVDVQNIYYTTRDSYQKQFNYRKFWQHLSAQGDIVIANAYATERHDTQQQK----- 58 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 L + GF V K + ++ K DV + +D + + ++ +V+ SGDG F Sbjct: 59 FQSALKHIGFNVKLKPFIQRSDGSA----KGDWDVGITIDVLDAAPHVDTVVLLSGDGDF 114 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 L+ A + K K + + V P++ + L D F+++ Sbjct: 115 DLLLKAAKDKYK---VGTKVYGVPALTASSLMNACDEFIEI 152 >gi|260773921|ref|ZP_05882836.1| hypothetical protein VIB_002400 [Vibrio metschnikovii CIP 69.14] gi|260610882|gb|EEX36086.1| hypothetical protein VIB_002400 [Vibrio metschnikovii CIP 69.14] Length = 157 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 40/164 (24%), Positives = 73/164 (44%), Gaps = 13/164 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 EKIA+ +D N+Y + + G +Y + + V +A Y +P+Q Sbjct: 1 MEKIAILVDVQNVYYTCRERYGRHFNYNQFWQQVTQGRHVFKANAYAIASKEPQQ----- 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF+V+ K + ++ K DV +A+DA+E ++ ++ +V+ SGDG Sbjct: 56 RQFHHILRGVGFEVMLKPFIQRSDGSA----KGDWDVGIALDAYELAQQVDTVVLVSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F LV +Q+ + + V P + + L A F+ + Sbjct: 112 DFEPLVERIQQ---RFQVKVEVYGVPRLTAQSLIDVASQFVPIE 152 >gi|330969505|gb|EGH69571.1| hypothetical protein PSYAR_03309 [Pseudomonas syringae pv. aceris str. M302273PT] Length = 158 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 39/164 (23%), Positives = 68/164 (41%), Gaps = 13/164 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIA+F D NLY + + A G +Y L R ++ A+ Y GD S Sbjct: 1 MKKIAVFADVQNLYYTVRQAHGCHFNYAALWADISKRGEIVHAFAYAIDRGD-----SKQ 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D + + ++ +V+ SGDG Sbjct: 56 QQFQQILRNLGFTVRLKPYIQRSDGSA----KGDWDVGITIDIMDYAPQVDEIVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ + K + + P + ++ L R A ++ + Sbjct: 112 DFDMLLERVIS---KHGVEAVAYGVPGLTANSLIRAASRYVPIE 152 >gi|153001687|ref|YP_001367368.1| hypothetical protein Shew185_3175 [Shewanella baltica OS185] gi|160876425|ref|YP_001555741.1| hypothetical protein Sbal195_3319 [Shewanella baltica OS195] gi|217972380|ref|YP_002357131.1| hypothetical protein Sbal223_1195 [Shewanella baltica OS223] gi|151366305|gb|ABS09305.1| protein of unknown function DUF88 [Shewanella baltica OS185] gi|160861947|gb|ABX50481.1| protein of unknown function DUF88 [Shewanella baltica OS195] gi|217497515|gb|ACK45708.1| protein of unknown function DUF88 [Shewanella baltica OS223] gi|315268615|gb|ADT95468.1| hypothetical protein Sbal678_3326 [Shewanella baltica OS678] Length = 157 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 13/164 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIALF+D N+Y + + A G +YRKL + + A Y GD Q Sbjct: 1 MKKIALFVDVQNIYYTCREAYGRQFNYRKLWQHLGYEGDIALAVAYAIHKGDDGQ----- 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 D L + GF+V K + ++ K DV + +D E + ++ +++ SGDG Sbjct: 56 LKFQDALKHIGFEVKLKPFIQRSDGSA----KGDWDVGITIDIMEAASEVDTVILLSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L LQ+ +K + + V P++ + LR A F + Sbjct: 112 DFDLL---LQKIHQKYGVETQVYGVPTLTAKSLRDAASQFHPID 152 >gi|28871798|ref|NP_794417.1| hypothetical protein PSPTO_4666 [Pseudomonas syringae pv. tomato str. DC3000] gi|28855050|gb|AAO58112.1| conserved protein of unknown function [Pseudomonas syringae pv. tomato str. DC3000] Length = 158 Score = 138 bits (349), Expect = 2e-31, Method: Composition-based stats. Identities = 39/164 (23%), Positives = 68/164 (41%), Gaps = 13/164 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIA+F D NLY + + A G +Y L R ++ A+ Y GD S Sbjct: 1 MKKIAVFADVQNLYYTVRQAYGCHFNYAALWADISKRGEIVHAFAYAIDRGD-----SKQ 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D + + ++ +V+ SGDG Sbjct: 56 QQFQQILRNLGFTVRLKPYIQRSDGSA----KGEWDVGITIDIMDFAPQVDEVVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ + K + + P + ++ L R A ++ + Sbjct: 112 DFDMLLDRVIS---KHGVEAVAYGVPGLTANSLIRAASRYVPIE 152 >gi|213966787|ref|ZP_03394938.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1] gi|301383296|ref|ZP_07231714.1| hypothetical protein PsyrptM_11692 [Pseudomonas syringae pv. tomato Max13] gi|302062465|ref|ZP_07254006.1| hypothetical protein PsyrptK_20968 [Pseudomonas syringae pv. tomato K40] gi|302133447|ref|ZP_07259437.1| hypothetical protein PsyrptN_18744 [Pseudomonas syringae pv. tomato NCPPB 1108] gi|213928637|gb|EEB62181.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1] gi|330873520|gb|EGH07669.1| hypothetical protein PSYMP_03990 [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330967689|gb|EGH67949.1| hypothetical protein PSYAC_24213 [Pseudomonas syringae pv. actinidiae str. M302091] gi|331018942|gb|EGH98998.1| hypothetical protein PLA106_23133 [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 158 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 39/164 (23%), Positives = 68/164 (41%), Gaps = 13/164 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIA+F D NLY + + A G +Y L R ++ A+ Y GD S Sbjct: 1 MKKIAVFADVQNLYYTVRQAYGCHFNYAALWADISKRGEIVHAFAYAIDRGD-----SKQ 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D + + ++ +V+ SGDG Sbjct: 56 QQFQQILRNLGFTVRLKPYIQRSDGSA----KGDWDVGITIDIMDFAPQVDEVVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ + K + + P + ++ L R A ++ + Sbjct: 112 DFDMLLDRVIS---KHGVEAVAYGVPGLTANSLIRAASRYVPIE 152 >gi|322369896|ref|ZP_08044458.1| hypothetical protein ZOD2009_10415 [Haladaptatus paucihalophilus DX253] gi|320550232|gb|EFW91884.1| hypothetical protein ZOD2009_10415 [Haladaptatus paucihalophilus DX253] Length = 165 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 41/167 (24%), Positives = 74/167 (44%), Gaps = 14/167 (8%) Query: 3 DPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 P +++ + D NLY ++++ +IDY LL + RA Y P++ Sbjct: 5 HPGQRVTVLADAQNLYHTAQSVYSRNIDYSSLLSKAAQDRELTRAIAYVIQADSPDEDR- 63 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 D L GF+ K K F + K+ DV + +DA + ++ +V+ +G Sbjct: 64 ----FFDALTDIGFEAKIKAIKTFGDGS----KKADWDVGICLDAITLAPKVDTVVLCTG 115 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 DG F L L+ + +V ++ S +++L AD F+DL+ Sbjct: 116 DGDFAQLATHLRHEGVRVEVMGFQES----TAEELIAAADSFIDLSE 158 >gi|15599146|ref|NP_252640.1| hypothetical protein PA3951 [Pseudomonas aeruginosa PAO1] gi|107103468|ref|ZP_01367386.1| hypothetical protein PaerPA_01004538 [Pseudomonas aeruginosa PACS2] gi|116051991|ref|YP_789166.1| hypothetical protein PA14_12750 [Pseudomonas aeruginosa UCBPP-PA14] gi|218889766|ref|YP_002438630.1| hypothetical protein PLES_10241 [Pseudomonas aeruginosa LESB58] gi|254242637|ref|ZP_04935959.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|296387523|ref|ZP_06876998.1| hypothetical protein PaerPAb_05192 [Pseudomonas aeruginosa PAb1] gi|313109387|ref|ZP_07795349.1| hypothetical protein PA39016_001770011 [Pseudomonas aeruginosa 39016] gi|9950139|gb|AAG07338.1|AE004813_5 conserved hypothetical protein [Pseudomonas aeruginosa PAO1] gi|115587212|gb|ABJ13227.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14] gi|126196015|gb|EAZ60078.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|218769989|emb|CAW25751.1| conserved hypothetical protein [Pseudomonas aeruginosa LESB58] gi|310881851|gb|EFQ40445.1| hypothetical protein PA39016_001770011 [Pseudomonas aeruginosa 39016] Length = 167 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 42/173 (24%), Positives = 71/173 (41%), Gaps = 19/173 (10%) Query: 1 MFDPR----EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGD 55 M P +KIA+F D NLY + + A G ++Y L ++ AY Y GD Sbjct: 1 MSRPESPAAKKIAVFADVQNLYYTVRQAYGCHLNYAALWADIARGGSIVEAYAYAIDRGD 60 Query: 56 PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEH 115 P L GF V K + + K DV + +D + + ++ Sbjct: 61 P-----RQQQFQQILRNLGFTVKLKPYIQRADGSA----KGDWDVGITIDVLDAAPRVDE 111 Query: 116 LVIFSGDGCFTTLVAA-LQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 +V+ SGDG F L+ ++ +V+T P + ++ L R A ++ + Sbjct: 112 VVLLSGDGDFDLLLEKVIRAHG----VVATAYGVPGLTANALIRAASRYVPIE 160 >gi|282901769|ref|ZP_06309684.1| protein of unknown function DUF88 [Cylindrospermopsis raciborskii CS-505] gi|281193386|gb|EFA68368.1| protein of unknown function DUF88 [Cylindrospermopsis raciborskii CS-505] Length = 173 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 50/182 (27%), Positives = 96/182 (52%), Gaps = 13/182 (7%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA---IVIRAYYYTTVVGDPE 57 M P ++++F+DG N++ + + G+ D R++L+ F++ +I A++YT + Sbjct: 1 MVLPMSRLSIFVDGNNMFYAQQKNGWFFDPRRVLEYFKNEQPETTLINAFWYTGLKDP-- 58 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHL 116 D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + + Sbjct: 59 ---QDQRGFRDALISLGYTVRTKILKEYYDDVSGRYSQKANLDIEIVVDMFNTVDQYDRV 115 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 V+FSGDG F + L+ K +T+VST M + +LR D ++DL ++++I + Sbjct: 116 VLFSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDQIEKT 171 Query: 177 PD 178 Sbjct: 172 EA 173 >gi|229592764|ref|YP_002874883.1| hypothetical protein PFLU5385 [Pseudomonas fluorescens SBW25] gi|229364630|emb|CAY52542.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25] Length = 158 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 41/164 (25%), Positives = 70/164 (42%), Gaps = 13/164 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIA+F D NLY + + A G +Y L SR ++ AY Y GD S Sbjct: 1 MKKIAVFADVQNLYYTVRQAYGCHFNYAALWADISSRGQIVEAYAYAIDRGD-----SKQ 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D + ++ ++ +V+ SGDG Sbjct: 56 QQFQQILRNLGFTVKLKPYIQRSDGSA----KGDWDVGITIDIMDAADHVDEIVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ + K + + P + ++ L R A ++ + Sbjct: 112 DFDMLLDRIIN---KHGVEAVAYGVPGLTANSLIRAASRYVPIE 152 >gi|282896757|ref|ZP_06304763.1| Protein of unknown function DUF88 [Raphidiopsis brookii D9] gi|281198166|gb|EFA73056.1| Protein of unknown function DUF88 [Raphidiopsis brookii D9] Length = 173 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 51/182 (28%), Positives = 96/182 (52%), Gaps = 13/182 (7%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA---IVIRAYYYTTVVGDPE 57 M P ++++F+DG N++ + + G+ D R++L+ F++ +I A++YT + Sbjct: 1 MVLPMSRLSIFVDGNNMFYAQQKNGWFFDPRRVLEYFKNEQPETTLINAFWYTGLKDP-- 58 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHL 116 D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + + Sbjct: 59 ---QDQRGFRDALISLGYTVRTKILKEYYDDVSGRYSQKANLDIEIVVDMFNTVDQYDRV 115 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 V+FSGDG F + L+ K +T+VST M + +LR D ++DL +K++I + Sbjct: 116 VLFSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIKDQIEKT 171 Query: 177 PD 178 Sbjct: 172 EA 173 >gi|71736408|ref|YP_276474.1| hypothetical protein PSPPH_4358 [Pseudomonas syringae pv. phaseolicola 1448A] gi|257482175|ref|ZP_05636216.1| hypothetical protein PsyrptA_02837 [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289675840|ref|ZP_06496730.1| hypothetical protein PsyrpsF_21381 [Pseudomonas syringae pv. syringae FF5] gi|298488862|ref|ZP_07006887.1| hypothetical protein PSA3335_4345 [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|71556961|gb|AAZ36172.1| uncharacterized conserved protein [Pseudomonas syringae pv. phaseolicola 1448A] gi|298156615|gb|EFH97710.1| hypothetical protein PSA3335_4345 [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|320322652|gb|EFW78745.1| hypothetical protein PsgB076_22027 [Pseudomonas syringae pv. glycinea str. B076] gi|320330563|gb|EFW86542.1| hypothetical protein PsgRace4_08595 [Pseudomonas syringae pv. glycinea str. race 4] gi|330873569|gb|EGH07718.1| hypothetical protein Pgy4_04537 [Pseudomonas syringae pv. glycinea str. race 4] gi|330888791|gb|EGH21452.1| hypothetical protein PSYMO_08069 [Pseudomonas syringae pv. mori str. 301020] gi|330987664|gb|EGH85767.1| hypothetical protein PLA107_21753 [Pseudomonas syringae pv. lachrymans str. M301315] gi|331011359|gb|EGH91415.1| hypothetical protein PSYTB_17135 [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 158 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 39/164 (23%), Positives = 68/164 (41%), Gaps = 13/164 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIA+F D NLY + + A G +Y L R ++ A+ Y GD S Sbjct: 1 MKKIAVFADVQNLYYTVRQAHGCHFNYAALWADISKRGEIVHAFAYAIDRGD-----SKQ 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D + + ++ +V+ SGDG Sbjct: 56 QQFQQILRNLGFTVRLKPYIQRSDGSA----KGDWDVGITIDIMDFAPQVDEVVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ + K + + P + ++ L R A ++ + Sbjct: 112 DFDMLLERVIS---KHGVEAVAYGVPGLTANSLIRAASRYVPIE 152 >gi|330895533|gb|EGH27843.1| hypothetical protein PSYJA_01969 [Pseudomonas syringae pv. japonica str. M301072PT] gi|330938177|gb|EGH41874.1| hypothetical protein PSYPI_05358 [Pseudomonas syringae pv. pisi str. 1704B] gi|330961649|gb|EGH61909.1| hypothetical protein PMA4326_24166 [Pseudomonas syringae pv. maculicola str. ES4326] Length = 158 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 39/164 (23%), Positives = 68/164 (41%), Gaps = 13/164 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIA+F D NLY + + A G +Y L R ++ A+ Y GD S Sbjct: 1 MKKIAVFADVQNLYYTVRQAHGCHFNYAALWADISKRGEIVHAFAYAIDRGD-----SKQ 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D + + ++ +V+ SGDG Sbjct: 56 QQFQQILRNLGFTVRLKPYIQRSDGSA----KGDWDVGITIDIMDFAPQVDEIVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ + K + + P + ++ L R A ++ + Sbjct: 112 DFDMLLERVIS---KHGVEAVAYGVPGLTANSLIRAASRYVPIE 152 >gi|70732718|ref|YP_262481.1| hypothetical protein PFL_5413 [Pseudomonas fluorescens Pf-5] gi|68347017|gb|AAY94623.1| conserved hypothetical protein [Pseudomonas fluorescens Pf-5] Length = 159 Score = 138 bits (348), Expect = 3e-31, Method: Composition-based stats. Identities = 39/164 (23%), Positives = 68/164 (41%), Gaps = 13/164 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIA+F D NLY + + A G +Y L + ++ AY Y GD S Sbjct: 1 MKKIAVFADVQNLYYTVRQAYGCHFNYAALWADISKQGQIVEAYAYAIDRGD-----SKQ 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D + + ++ +V+ SGDG Sbjct: 56 QQFQQILRNLGFTVKLKPYIQRSDGSA----KGDWDVGITIDIMDAAAHVDEVVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ + K + + P + ++ L R A ++ + Sbjct: 112 DFDLLLERIIH---KHGVSAVAYGVPGLTANSLIRAATRYVPIE 152 >gi|254413060|ref|ZP_05026832.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC 7420] gi|196180224|gb|EDX75216.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC 7420] Length = 172 Score = 138 bits (347), Expect = 3e-31, Method: Composition-based stats. Identities = 49/181 (27%), Positives = 93/181 (51%), Gaps = 12/181 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVI--RAYYYTTVVGDPEQ 58 M +I++F+DG N++ + + G+ D +++L+ FR ++ A++YT + Sbjct: 1 MPCSMNRISIFVDGNNMFYAQQKNGWFFDPKRVLEYFRKEPHIVLVNAFWYTGLKDP--- 57 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHLV 117 D L G+ V K+ KE+ ++ GR K+++D+E+ VD F E + ++ Sbjct: 58 --QDQRGFRDALISLGYTVRTKILKEYYDDSSGRYSQKANLDIEIVVDMFNTVEQYDRVI 115 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 +FSGDG F + L+ K +T+VST M + +LR D ++DL +++ I + Sbjct: 116 LFSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDYIEKTD 171 Query: 178 D 178 Sbjct: 172 S 172 >gi|282899662|ref|ZP_06307626.1| protein of unknown function DUF88 [Cylindrospermopsis raciborskii CS-505] gi|281195541|gb|EFA70474.1| protein of unknown function DUF88 [Cylindrospermopsis raciborskii CS-505] Length = 230 Score = 138 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 59/178 (33%), Positives = 92/178 (51%), Gaps = 14/178 (7%) Query: 1 MFD--PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58 M D R ++A+FIDG NL+ ++ +G +IDY KLL + ++RA++YT V E+ Sbjct: 50 MSDDLNRGRVAIFIDGLNLFHAALQIGIEIDYVKLLCRLTQTSRLLRAFFYTGVDTSKEK 109 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVI 118 Q L W+ NG++VV K TE+ K +++VE+AVD + + V+ Sbjct: 110 Q----QGFLLWMRRNGYRVVTKDIIALTESG----KKPNLNVEIAVDMITLAPYYDTAVL 161 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 SGDG V A+ +V ++ +M SD L ADYF+D +K I +D Sbjct: 162 VSGDGDLAYAVNAVTSLGSRVEVI----GLQTMTSDSLIDVADYFIDFDSIKQYIQKD 215 >gi|240139942|ref|YP_002964419.1| hypothetical protein MexAM1_META1p3405 [Methylobacterium extorquens AM1] gi|240009916|gb|ACS41142.1| Conserved hypothetical protein (DUF88) [Methylobacterium extorquens AM1] Length = 168 Score = 138 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 64/124 (51%), Positives = 97/124 (78%) Query: 57 EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHL 116 +Q++S + PL+DWL YNG++VV K KEFT++ GR+++K +MD+ELA+DA E + ++H+ Sbjct: 4 DQEYSSIRPLIDWLDYNGYRVVTKPVKEFTDSAGRRKIKGNMDIELAIDALELAPHIDHM 63 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 V+FSGDG F +LV A+QR+ +V++VST+ + P+M +D LRRQAD F+DLA+L + I RD Sbjct: 64 VLFSGDGDFRSLVEAIQRRGVRVSVVSTIQTQPAMIADDLRRQADEFIDLAHLASRIGRD 123 Query: 177 PDED 180 P E Sbjct: 124 PSER 127 >gi|327482342|gb|AEA85652.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166] Length = 158 Score = 138 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 42/164 (25%), Positives = 68/164 (41%), Gaps = 14/164 (8%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIALF D NLY + + A G DY L R ++ AY Y GDP Sbjct: 1 MKKIALFADVQNLYYTVRQAHGCHFDYSALWADVSRRGSIVEAYAYAIERGDP-----RQ 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D + + ++ +V+ SGDG Sbjct: 56 QQFQQILRKLGFTVKLKPYIQRSDGSA----KGDWDVGITIDVLDAAARVDEVVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ ++ + +T P + + L R A ++ + Sbjct: 112 DFDLLLERVRAAG----VEATAYGVPGLTAQSLIRAATRYVPIE 151 >gi|66047528|ref|YP_237369.1| hypothetical protein Psyr_4301 [Pseudomonas syringae pv. syringae B728a] gi|302184786|ref|ZP_07261459.1| hypothetical protein Psyrps6_00540 [Pseudomonas syringae pv. syringae 642] gi|63258235|gb|AAY39331.1| Protein of unknown function DUF88 [Pseudomonas syringae pv. syringae B728a] Length = 158 Score = 138 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 39/164 (23%), Positives = 68/164 (41%), Gaps = 13/164 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIA+F D NLY + + A G +Y L R ++ A+ Y GD S Sbjct: 1 MKKIAVFADVQNLYYTVRQAHGCHFNYAALWADISKRGEIVHAFAYAIDRGD-----SKQ 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D + + ++ +V+ SGDG Sbjct: 56 QQFQQILRNLGFTVRLKPYIQRSDGSA----KGDWDVGITIDIMDFAPQVDEIVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ + K + + P + ++ L R A ++ + Sbjct: 112 DFDMLLERVIS---KHGVEAVAYGVPGLTANSLIRAASRYVPIE 152 >gi|77461146|ref|YP_350653.1| hypothetical protein Pfl01_4925 [Pseudomonas fluorescens Pf0-1] gi|77385149|gb|ABA76662.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1] Length = 159 Score = 138 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 39/164 (23%), Positives = 68/164 (41%), Gaps = 13/164 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIA+F D NLY + + A G +Y L ++ AY Y GD S Sbjct: 1 MKKIAVFADVQNLYYTVRQAYGCHFNYAALWADVSQHGQIVEAYAYAIDRGD-----SKQ 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D + ++ ++ +V+ SGDG Sbjct: 56 QQFQQILRNLGFTVKLKPYIQRSDGSA----KGDWDVGITLDIMDAADHVDEIVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ + K + + P + ++ L R A ++ + Sbjct: 112 DFDMLLERIIN---KHGVQAVAYGVPGLTANSLIRAASRYVPIE 152 >gi|237801480|ref|ZP_04589941.1| hypothetical protein POR16_21831 [Pseudomonas syringae pv. oryzae str. 1_6] gi|331024339|gb|EGI04396.1| hypothetical protein POR16_21831 [Pseudomonas syringae pv. oryzae str. 1_6] Length = 158 Score = 137 bits (346), Expect = 4e-31, Method: Composition-based stats. Identities = 39/164 (23%), Positives = 68/164 (41%), Gaps = 13/164 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIA+F D NLY + + A G +Y L R ++ A+ Y GD S Sbjct: 1 MKKIAVFADVQNLYYTVRQAHGCHFNYAALWADISKRGEIVHAFAYAIDRGD-----SKQ 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D + + ++ +V+ SGDG Sbjct: 56 QQFQQILRNLGFTVRLKPYIQRSDGSA----KGDWDVGITIDIMDFAPQVDEVVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ + K + + P + ++ L R A ++ + Sbjct: 112 DFDMLLDRVIS---KHGVAAVAYGVPGLTANSLIRAASRYVPIE 152 >gi|56752213|ref|YP_172914.1| hypothetical protein syc2204_c [Synechococcus elongatus PCC 6301] gi|81300700|ref|YP_400908.1| hypothetical protein Synpcc7942_1891 [Synechococcus elongatus PCC 7942] gi|56687172|dbj|BAD80394.1| hypothetical protein [Synechococcus elongatus PCC 6301] gi|81169581|gb|ABB57921.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942] gi|121309776|dbj|BAF44194.1| LabA [Synechococcus elongatus PCC 7942] Length = 186 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 51/185 (27%), Positives = 92/185 (49%), Gaps = 13/185 (7%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIV--IRAYYYTTVVGDPEQ 58 M ++A+FIDG N++ + + G+ D R++L F +R + + AY+YT + Sbjct: 1 MAFRPSRLAIFIDGNNMFYAQQKNGWFFDPRRVLNYFANRPEIELVNAYWYTGLKDP--- 57 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCG--RKRVKSSMDVELAVDAFEQSEGLEHL 116 D L G+ V K+ KEF + R ++++D+E+ +D F E + + Sbjct: 58 --QDQRGFRDALVSLGYTVRTKMLKEFHDESNGNRYFQRANLDIEIVIDMFNTVEQYDEI 115 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 V+FSGDG F + L+ K +T+VST M + +LR D ++DL +++ I + Sbjct: 116 VLFSGDGDFERAIELLRAKQTHITVVSTD----GMIARELRNATDRYIDLNDIRSFIEKT 171 Query: 177 PDEDK 181 + Sbjct: 172 ERPEP 176 >gi|92112887|ref|YP_572815.1| hypothetical protein Csal_0758 [Chromohalobacter salexigens DSM 3043] gi|91795977|gb|ABE58116.1| protein of unknown function DUF88 [Chromohalobacter salexigens DSM 3043] Length = 158 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 39/165 (23%), Positives = 69/165 (41%), Gaps = 15/165 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 ++A+F+D N+Y + + A G DYR+ + V+ Y T GD + Sbjct: 1 MTRVAIFVDTQNVYYTVREAYGKHFDYRRFWARATANREVLTVRCYATDKGD-----AKQ 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 + L GF+V K + + K DV + +DA E + + +V+ SGDG Sbjct: 56 REFQNILRSIGFEVRLKPFIQRADGSA----KGDWDVGITLDAIEYAAQADVVVLVSGDG 111 Query: 124 CFTTLVAALQR-KVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L ++ K+V + P + ++ L A F+ + Sbjct: 112 DFDLLAEKIREVHGKRVEV----YGVPKLTANSLINAASQFIPIE 152 >gi|109898030|ref|YP_661285.1| hypothetical protein Patl_1710 [Pseudoalteromonas atlantica T6c] gi|109700311|gb|ABG40231.1| protein of unknown function DUF88 [Pseudoalteromonas atlantica T6c] Length = 158 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 37/161 (22%), Positives = 75/161 (46%), Gaps = 13/161 (8%) Query: 7 KIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 +IA+F+D N+Y +++ +YR+ + + ++ A Y T D S Sbjct: 4 RIAVFVDVQNIYYTTRDTYQKQFNYRQFWQHLSEQGDIVIANAYATERHD-----SQQQK 58 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 L + GF V K + ++ K DV + +D + ++ ++ +V+ SGDG F Sbjct: 59 FQSALKHIGFNVKLKPFIQRSDGSA----KGDWDVGITIDVLDAAQQVDTVVLLSGDGDF 114 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 L+ A++ KK + + V P++ ++ L D F+++ Sbjct: 115 DLLLKAVK---KKHEVKTKVYGVPALTANALVSACDEFVEI 152 >gi|330976912|gb|EGH76935.1| hypothetical protein PSYAP_09660 [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 158 Score = 137 bits (346), Expect = 5e-31, Method: Composition-based stats. Identities = 40/164 (24%), Positives = 69/164 (42%), Gaps = 13/164 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIA+F D NLY + + A G +Y L R R ++ A+ Y GD S Sbjct: 1 MKKIAVFADVQNLYYTVRQAHGCHFNYAALWADIRKRGEIVHAFAYAIDRGD-----SKQ 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D + + ++ +V+ SGDG Sbjct: 56 QQFQQILRNLGFTVRLKPYIQRSDGSA----KGDWDVGITIDIMDFAPQVDEIVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ + K + + P + ++ L R A ++ + Sbjct: 112 DFDMLLERVIS---KHGVEAVAYGVPGLTANSLIRAASRYVPIE 152 >gi|262404166|ref|ZP_06080721.1| hypothetical protein VOA_002156 [Vibrio sp. RC586] gi|262349198|gb|EEY98336.1| hypothetical protein VOA_002156 [Vibrio sp. RC586] Length = 157 Score = 137 bits (345), Expect = 6e-31, Method: Composition-based stats. Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 13/165 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 EKIA+ +D N+Y + + G DY + V++A Y DP+Q Sbjct: 1 MEKIAILVDVQNVYYTCRERYGRHFDYNQFWSQATQGRAVVKANAYAIASKDPQQ----- 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF+V+ K + ++ K DV +A+D +E ++ ++ +V+ SGDG Sbjct: 56 RQFHHILRGIGFEVMLKPFIQRSDGSA----KGDWDVGIALDGYELAQEVDTVVLVSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F LV +Q+ + + V P + + L A+ F + + Sbjct: 112 DFEPLVTRIQQ---RFQVKVEVYGVPKLTAQNLIDVANQFHPIEH 153 >gi|153214272|ref|ZP_01949289.1| conserved hypothetical protein [Vibrio cholerae 1587] gi|229515202|ref|ZP_04404662.1| hypothetical protein VCB_002859 [Vibrio cholerae TMA 21] gi|297579334|ref|ZP_06941262.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|124115420|gb|EAY34240.1| conserved hypothetical protein [Vibrio cholerae 1587] gi|229347907|gb|EEO12866.1| hypothetical protein VCB_002859 [Vibrio cholerae TMA 21] gi|297536928|gb|EFH75761.1| conserved hypothetical protein [Vibrio cholerae RC385] Length = 157 Score = 137 bits (344), Expect = 8e-31, Method: Composition-based stats. Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 15/166 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 EKIA+ +D N+Y + + G DY + V++A Y DP+Q Sbjct: 1 MEKIAILVDVQNVYYTCREQYGRHFDYNQFWSQVTQNRTVVKANAYAIASKDPQQ----- 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF+V+ K + ++ K DV +A+D +E ++ ++ +V+ SGDG Sbjct: 56 RQFHHILRGIGFEVMLKPFIQRSDGSA----KGDWDVGIALDGYELAQEVDTVVLVSGDG 111 Query: 124 CFTTLVAAL-QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F LV + QR KV + P + + L A F + + Sbjct: 112 DFEPLVTRIAQRFQVKVEV----YGVPKLTAQHLIDVASQFHPIEH 153 >gi|330811889|ref|YP_004356351.1| hypothetical protein PSEBR_a4925 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379997|gb|AEA71347.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 159 Score = 137 bits (344), Expect = 8e-31, Method: Composition-based stats. Identities = 39/165 (23%), Positives = 70/165 (42%), Gaps = 15/165 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIA+F D NLY + + A G +Y L + ++ AY Y GD S Sbjct: 1 MKKIAVFADVQNLYYTVRQAYGCHFNYAALWADVSKQGQIVEAYAYAIDRGD-----SKQ 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D + ++ ++ +V+ SGDG Sbjct: 56 QQFQQILRNLGFIVKLKPYIQRSDGSA----KGDWDVGITLDIMDAADHVDEVVLASGDG 111 Query: 124 CFTTLVAA-LQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ +Q+ + + P + ++ L R A ++ + Sbjct: 112 DFDMLLERIIQKHGVQ----AVAYGVPGLTANSLIRAASRYVPIE 152 >gi|262274163|ref|ZP_06051975.1| hypothetical protein VHA_001139 [Grimontia hollisae CIP 101886] gi|262221973|gb|EEY73286.1| hypothetical protein VHA_001139 [Grimontia hollisae CIP 101886] Length = 161 Score = 137 bits (344), Expect = 8e-31, Method: Composition-based stats. Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 15/170 (8%) Query: 1 MFDPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 M +KIA+F D N+Y +++ A G +YRKL + + V+ A Y D +Q Sbjct: 1 MGFSLKKIAVFADVQNVYYTTRQAYGRQFNYRKLWQRLQEMGDVVCANAYAIRRDDDQQ- 59 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119 D L + GF+V K + ++ K DV +A+D E + ++ +V+ Sbjct: 60 ----IKFQDALRHIGFEVKLKPYIQRSDGS----TKGDWDVGIAIDVMEMAPEVDTVVLL 111 Query: 120 SGDGCFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 SGDG F L+ ++ + K+ + P + ++ L D F+ + Sbjct: 112 SGDGDFDLLMNKVRERYGKEAIVF----GVPMLTANSLINSVDRFIGIED 157 >gi|225851407|ref|YP_002731641.1| hypothetical protein PERMA_1879 [Persephonella marina EX-H1] gi|225645689|gb|ACO03875.1| conserved hypothetical protein [Persephonella marina EX-H1] Length = 224 Score = 137 bits (344), Expect = 9e-31, Method: Composition-based stats. Identities = 48/192 (25%), Positives = 86/192 (44%), Gaps = 24/192 (12%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTT-----VVGDPE 57 P EK+A+FIDG N++ + + I+Y+KL+ R ++RAY+YT + D Sbjct: 18 YPNEKVAIFIDGGNMFHACNYMQIKINYKKLIDILRKDRWLLRAYFYTGIPSGDLPRDVR 77 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEH 115 +Q L+ L G +V K+ E ++ +D+ LA D + + Sbjct: 78 EQLRKQQGFLNELQNLGIKVKTMPLKKTPEG----YIEKGIDILLATDMVSLAFRNAYDT 133 Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK----- 170 ++ SGD + +V +Q K+V S + +S +LR+ D F+ L +K Sbjct: 134 AILVSGDSDYVPVVKEIQELGKRVENASFKRT----SSYELRKVCDEFILLDNIKHRFTT 189 Query: 171 ----NEIARDPD 178 +I + P+ Sbjct: 190 PLYPEKIEKPPE 201 >gi|153800465|ref|ZP_01955051.1| conserved hypothetical protein [Vibrio cholerae MZO-3] gi|124124091|gb|EAY42834.1| conserved hypothetical protein [Vibrio cholerae MZO-3] Length = 157 Score = 137 bits (344), Expect = 9e-31, Method: Composition-based stats. Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 15/166 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 EKIA+ +D N+Y + + G DY + V++A Y DP+Q Sbjct: 1 MEKIAILVDVQNVYYTCREQYGRHFDYNQFWSQVTQNRTVVKANAYAIASKDPQQ----- 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF+V+ K + ++ K DV +A+D +E ++ ++ +V+ SGDG Sbjct: 56 RQFHHILRGIGFEVMLKPFIQRSDGSA----KGDWDVGIALDGYELAQEVDTVVLVSGDG 111 Query: 124 CFTTLVAAL-QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F LV + QR KV + P + + L A F + + Sbjct: 112 DFEPLVTRIAQRFQVKVEV----YGVPKLTAQHLIDVASQFHPIEH 153 >gi|218440568|ref|YP_002378897.1| hypothetical protein PCC7424_3645 [Cyanothece sp. PCC 7424] gi|218173296|gb|ACK72029.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7424] Length = 180 Score = 137 bits (344), Expect = 9e-31, Method: Composition-based stats. Identities = 49/179 (27%), Positives = 96/179 (53%), Gaps = 12/179 (6%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA--IVIRAYYYTTVVGDPEQQ 59 P++++++F+DG N++ + + G+ D R++L+ F + +I A++YT + + Sbjct: 10 LYPKDRLSIFVDGNNMFYAQQKNGWFFDPRRVLEYFTNDPTVNLINAFWYTGL-----KD 64 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVI 118 D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +++ Sbjct: 65 SQDQRGFRDALISLGYTVRTKILKEYYDDSSGRYSQKANLDIEIVVDMFNTVDQYDRVIL 124 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 FSGDG F + L+ K +T+VST M + +LR D ++DL ++N I + Sbjct: 125 FSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRNFIEKTD 179 >gi|152985348|ref|YP_001346543.1| hypothetical protein PSPA7_1157 [Pseudomonas aeruginosa PA7] gi|150960506|gb|ABR82531.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7] Length = 167 Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats. Identities = 41/173 (23%), Positives = 71/173 (41%), Gaps = 19/173 (10%) Query: 1 MFDPR----EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGD 55 M P +KIA+F D NLY + + A G ++Y L R ++ AY Y GD Sbjct: 1 MSHPESPAAKKIAVFADVQNLYYTVRQAYGCHLNYAALWADIARRGRIVEAYAYAIDRGD 60 Query: 56 PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEH 115 P L GF V K + + K DV + +D + + ++ Sbjct: 61 P-----RQQQFQRILRNLGFTVKLKPYIQRADGSA----KGDWDVGITIDVLDAAPRVDE 111 Query: 116 LVIFSGDGCFTTLVAA-LQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 +V+ SGDG F L+ ++ + ++ P + ++ L R A ++ + Sbjct: 112 VVLLSGDGDFDLLLEKVIRAHG----VEASAYGVPGLTANALIRAASRYVPIE 160 >gi|289627587|ref|ZP_06460541.1| hypothetical protein PsyrpaN_21062 [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289649838|ref|ZP_06481181.1| hypothetical protein Psyrpa2_19118 [Pseudomonas syringae pv. aesculi str. 2250] gi|330870428|gb|EGH05137.1| hypothetical protein PSYAE_24882 [Pseudomonas syringae pv. aesculi str. 0893_23] Length = 158 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 39/164 (23%), Positives = 68/164 (41%), Gaps = 13/164 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIA+F D NLY + + A G +Y L R ++ A+ Y GD S Sbjct: 1 MKKIAVFADVQNLYYTVRQAHGCHFNYAALWADISKRGEIVHAFAYAIDRGD-----SKQ 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D + + ++ +V+ SGDG Sbjct: 56 QQFQQILRNLGFTVRLKPYIQRSDGSA----KGDWDVGITIDIMDFAPQVDEVVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ + K + + P + ++ L R A ++ + Sbjct: 112 DFDMLLERVIS---KHDVEAVAYGVPGLTANSLIRAASRYVPIE 152 >gi|119946864|ref|YP_944544.1| hypothetical protein Ping_3258 [Psychromonas ingrahamii 37] gi|119865468|gb|ABM04945.1| hypothetical protein DUF88 [Psychromonas ingrahamii 37] Length = 157 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 39/164 (23%), Positives = 72/164 (43%), Gaps = 13/164 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 KIA+F D N+Y +++ A G +YRKL + + ++ AY Y GD +Q Sbjct: 1 MNKIAVFADVQNIYYTTRQAYGKQFNYRKLWQQLEQQGDIVSAYAYAIERGDNQQ----- 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 D L + GF+V K + ++ K DV + +D E + ++ +++ SGDG Sbjct: 56 KKFQDVLTHLGFEVKLKPFIQRSDGTA----KGDWDVGITIDIMETAPQVDTIILLSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L +++ + + P + + L + F + Sbjct: 112 DFAILFDKVKQA---YGVKTEAYGVPKLTAKALIDASTVFHPIE 152 >gi|157960982|ref|YP_001501016.1| hypothetical protein Spea_1154 [Shewanella pealeana ATCC 700345] gi|157845982|gb|ABV86481.1| protein of unknown function DUF88 [Shewanella pealeana ATCC 700345] Length = 157 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 13/164 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 ++IALF+D N+Y + + A G +YRKL + V +A Y GD Q Sbjct: 1 MKRIALFVDVQNIYYTCRQAYGKQFNYRKLWQHLGYEGDVSQATAYAIHRGDDGQ----- 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 D L + GF+V K + ++ K DV + +D E + ++ +++ SGDG Sbjct: 56 LKFQDALKHIGFEVKLKPFIQRSDGSA----KGDWDVGITIDIMEAASEVDCVILLSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ + + K + + V P++ + L + F ++ Sbjct: 112 DFDLLMQRIHQ---KYGVETQVYGVPTLTAKSLIDSVNQFHEID 152 >gi|110834666|ref|YP_693525.1| hypothetical protein ABO_1805 [Alcanivorax borkumensis SK2] gi|110647777|emb|CAL17253.1| conserved hypothetical protein [Alcanivorax borkumensis SK2] Length = 160 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 40/165 (24%), Positives = 69/165 (41%), Gaps = 13/165 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +IA+F D N+Y +++ A G +YR L + ++ ++ A Y T GD Q Sbjct: 3 MPRIAVFADVQNIYYTTRQAFGRPFNYRALWQLLSAQGEIVHALAYATHRGDDGQ----- 57 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 D L + GF V K + ++ K DV +AVD + ++ +V+ SGDG Sbjct: 58 TKFQDALKHIGFTVKLKPYIQRSDGS----SKGDWDVGIAVDVMTLAPEVDTVVLLSGDG 113 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F L+ + + + V + + L A F + Sbjct: 114 DFDVLLTRV---GANPGVRTEVYGVEPLTARSLIDSASVFHPIGD 155 >gi|194335638|ref|YP_002017432.1| protein of unknown function DUF88 [Pelodictyon phaeoclathratiforme BU-1] gi|194308115|gb|ACF42815.1| protein of unknown function DUF88 [Pelodictyon phaeoclathratiforme BU-1] Length = 287 Score = 136 bits (343), Expect = 1e-30, Method: Composition-based stats. Identities = 51/173 (29%), Positives = 89/173 (51%), Gaps = 9/173 (5%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 + A+FIDGANL+ + + LG+ ID+ +L+ F S + A YY ++ + Sbjct: 8 MGRAAVFIDGANLFYTQRHLGWQIDFSRLMAFFISGYATVEANYYVPASEPVSEENAA-- 65 Query: 65 PLLDWLHYNGFQVVAKVAKEFTE-NCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L +G+ + +K K+ G +K ++DVEL VDA +++ + ++FSGD Sbjct: 66 -FTRVLMAHGYHITSKPVKKIVNKETGVIVMKGNLDVELVVDALSRADQYDTFILFSGDS 124 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA-DYFMDLAYLKNEIAR 175 F L+ AL+ K K+V + ST +++ +L + + DLA LK I + Sbjct: 125 DFIPLLRALKEKGKEVLVYST----QGLSARELLAEPGIAYHDLALLKERIEQ 173 >gi|312963199|ref|ZP_07777683.1| protein of unknown function DUF88 [Pseudomonas fluorescens WH6] gi|311282465|gb|EFQ61062.1| protein of unknown function DUF88 [Pseudomonas fluorescens WH6] Length = 158 Score = 136 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 40/164 (24%), Positives = 69/164 (42%), Gaps = 13/164 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIA+F D NLY + + A G +Y L +R ++ AY Y GD S Sbjct: 1 MKKIAVFADVQNLYYTVRQAYGCHFNYAALWADISARGQIVEAYAYAIDRGD-----SKQ 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + + K DV + +D + ++ ++ +V+ SGDG Sbjct: 56 QQFQQILRNLGFTVKLKPYIQRADGSA----KGDWDVGITLDIMDAADHVDEVVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ + K + + P + ++ L R A ++ + Sbjct: 112 DFDMLLERIIH---KHGVHAVAYGVPGLTANSLIRAASRYVPIE 152 >gi|119511234|ref|ZP_01630350.1| hypothetical protein N9414_18593 [Nodularia spumigena CCY9414] gi|119464112|gb|EAW45033.1| hypothetical protein N9414_18593 [Nodularia spumigena CCY9414] Length = 173 Score = 136 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 50/179 (27%), Positives = 93/179 (51%), Gaps = 13/179 (7%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA---IVIRAYYYTTVVGDPE 57 M P ++++F+DG N++ + + G+ D R++L F+ +I A++YT + Sbjct: 1 MGSPMNRLSIFVDGNNMFYAQQKNGWFFDPRRVLDYFKHEQSDTTLINAFWYTGLKDP-- 58 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHL 116 D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + + Sbjct: 59 ---QDQRGFRDALISLGYTVRTKILKEYYDDSSGRYSQKANLDIEIVVDMFNTVDQYDRV 115 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 V+FSGDG F + L+ K +T+VST M + +LR D ++DL +++ I + Sbjct: 116 VLFSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDSIEK 170 >gi|212634169|ref|YP_002310694.1| hypothetical protein swp_1319 [Shewanella piezotolerans WP3] gi|212555653|gb|ACJ28107.1| Conserved hypothetical protein [Shewanella piezotolerans WP3] Length = 157 Score = 136 bits (342), Expect = 1e-30, Method: Composition-based stats. Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 13/165 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIALF+D N+Y + + A G +YRKL + + A Y GD Q Sbjct: 1 MKKIALFVDVQNIYYTCRQAYGRQFNYRKLWQHLGYEGEITSATAYAIHRGDDGQ----- 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 D L + GF V K + ++ K DV + +D E + ++ +++ SGDG Sbjct: 56 LKFQDALKHIGFDVKLKPFIQRSDGSA----KGDWDVGITIDIMEAASEVDCVILLSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F L+ + + K + + V P + + L A + ++ Sbjct: 112 DFDLLMLKIYQ---KYGVETQVYGVPGLTAKSLIDSASQYHEIDD 153 >gi|167623131|ref|YP_001673425.1| hypothetical protein Shal_1197 [Shewanella halifaxensis HAW-EB4] gi|167353153|gb|ABZ75766.1| protein of unknown function DUF88 [Shewanella halifaxensis HAW-EB4] Length = 172 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 13/164 (7%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +KIALF+D N+Y + + A G +YRKL + + A Y GD Q Sbjct: 17 KKIALFVDVQNIYYTCRQAYGRQFNYRKLWQHLGYEGNISAATAYAIHRGDDGQ-----L 71 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 D L + GF+V K + ++ K DV + +D E + ++ +++ SGDG Sbjct: 72 KFQDALKHIGFEVKLKPFIQRSDGSA----KGDWDVGITIDIMEAASEVDCVILLSGDGD 127 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F L+ +++ K I + V PS+ + L + F ++ Sbjct: 128 FDLLMQKIKQ---KYGIETQVYGVPSLTAKSLIDSVEQFHEIDD 168 >gi|15641813|ref|NP_231445.1| hypothetical protein VC1811 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121585837|ref|ZP_01675631.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|121727642|ref|ZP_01680745.1| conserved hypothetical protein [Vibrio cholerae V52] gi|147673789|ref|YP_001217351.1| hypothetical protein VC0395_A1407 [Vibrio cholerae O395] gi|153817839|ref|ZP_01970506.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457] gi|153821111|ref|ZP_01973778.1| conserved hypothetical protein [Vibrio cholerae B33] gi|153828564|ref|ZP_01981231.1| conserved hypothetical protein [Vibrio cholerae 623-39] gi|227081940|ref|YP_002810491.1| hypothetical protein VCM66_1734 [Vibrio cholerae M66-2] gi|229508089|ref|ZP_04397594.1| hypothetical protein VCF_003323 [Vibrio cholerae BX 330286] gi|229511672|ref|ZP_04401151.1| hypothetical protein VCE_003081 [Vibrio cholerae B33] gi|229518811|ref|ZP_04408254.1| hypothetical protein VCC_002836 [Vibrio cholerae RC9] gi|229520283|ref|ZP_04409709.1| hypothetical protein VIF_000801 [Vibrio cholerae TM 11079-80] gi|229607650|ref|YP_002878298.1| hypothetical protein VCD_002562 [Vibrio cholerae MJ-1236] gi|254285238|ref|ZP_04960203.1| conserved hypothetical protein [Vibrio cholerae AM-19226] gi|254848901|ref|ZP_05238251.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|255745423|ref|ZP_05419372.1| hypothetical protein VCH_001771 [Vibrio cholera CIRS 101] gi|262147203|ref|ZP_06028007.1| hypothetical protein VIG_000056 [Vibrio cholerae INDRE 91/1] gi|262169804|ref|ZP_06037495.1| hypothetical protein VIJ_003057 [Vibrio cholerae RC27] gi|9656336|gb|AAF94959.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121549975|gb|EAX59993.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|121630029|gb|EAX62436.1| conserved hypothetical protein [Vibrio cholerae V52] gi|126511659|gb|EAZ74253.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457] gi|126521307|gb|EAZ78530.1| conserved hypothetical protein [Vibrio cholerae B33] gi|146315672|gb|ABQ20211.1| conserved hypothetical protein [Vibrio cholerae O395] gi|148875959|gb|EDL74094.1| conserved hypothetical protein [Vibrio cholerae 623-39] gi|150424510|gb|EDN16446.1| conserved hypothetical protein [Vibrio cholerae AM-19226] gi|227009828|gb|ACP06040.1| conserved hypothetical protein [Vibrio cholerae M66-2] gi|227013710|gb|ACP09920.1| conserved hypothetical protein [Vibrio cholerae O395] gi|229342649|gb|EEO07641.1| hypothetical protein VIF_000801 [Vibrio cholerae TM 11079-80] gi|229343500|gb|EEO08475.1| hypothetical protein VCC_002836 [Vibrio cholerae RC9] gi|229351637|gb|EEO16578.1| hypothetical protein VCE_003081 [Vibrio cholerae B33] gi|229355594|gb|EEO20515.1| hypothetical protein VCF_003323 [Vibrio cholerae BX 330286] gi|229370305|gb|ACQ60728.1| hypothetical protein VCD_002562 [Vibrio cholerae MJ-1236] gi|254844606|gb|EET23020.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|255737253|gb|EET92649.1| hypothetical protein VCH_001771 [Vibrio cholera CIRS 101] gi|262022038|gb|EEY40748.1| hypothetical protein VIJ_003057 [Vibrio cholerae RC27] gi|262031360|gb|EEY49970.1| hypothetical protein VIG_000056 [Vibrio cholerae INDRE 91/1] gi|327484370|gb|AEA78777.1| hypothetical protein VCLMA_A1565 [Vibrio cholerae LMA3894-4] Length = 157 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 15/166 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 EKIA+ +D N+Y + + G DY + V++A Y DP+Q Sbjct: 1 MEKIAILVDVQNVYYTCREQYGRHFDYNQFWSQVTQNRTVVKANAYAIASKDPQQ----- 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF+V+ K + ++ K DV +A+D +E ++ ++ +V+ SGDG Sbjct: 56 RQFHHILRGIGFEVMLKPFIQRSDGSA----KGDWDVGIALDGYELAQEVDTVVLVSGDG 111 Query: 124 CFTTLVAAL-QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F LV + QR KV + P + + L A F + + Sbjct: 112 DFEPLVTRIAQRFQVKVEV----YGVPKLTAQHLIDVASQFHPIEH 153 >gi|15789664|ref|NP_279488.1| hypothetical protein VNG0419C [Halobacterium sp. NRC-1] gi|169235378|ref|YP_001688578.1| hypothetical protein OE1626F [Halobacterium salinarum R1] gi|10580028|gb|AAG18968.1| conserved hypothetical protein [Halobacterium sp. NRC-1] gi|167726444|emb|CAP13229.1| conserved hypothetical protein [Halobacterium salinarum R1] Length = 165 Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats. Identities = 43/168 (25%), Positives = 78/168 (46%), Gaps = 14/168 (8%) Query: 2 FDPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 P +++A+ D NLY S+++ +IDY LL + RA Y ++ Sbjct: 4 LQPAQRVAVLADSQNLYHSAQSVYSQNIDYAALLDKGVQDRELTRAIAYVIRAQSEDEDR 63 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 D L GF+ K K F + K+ DV +++DA ++ ++ +V+ + Sbjct: 64 -----FFDALRDIGFETKIKAIKTFGDGS----KKADWDVGMSLDAVSLADHIDTIVLCT 114 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 GDG F+ L L+ + +V +++ S A+ +L AD F+DL+ Sbjct: 115 GDGDFSRLCRHLRHEGVRVEVMAFEES----AATELVDAADSFVDLSE 158 >gi|55377125|ref|YP_134975.1| hypothetical protein rrnAC0208 [Haloarcula marismortui ATCC 43049] gi|55229850|gb|AAV45269.1| unknown [Haloarcula marismortui ATCC 43049] Length = 165 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 40/172 (23%), Positives = 78/172 (45%), Gaps = 14/172 (8%) Query: 3 DPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 P +++A+ D NLY ++++ +IDY LL+ + RA Y PE++ Sbjct: 5 QPGQRVAVLADAQNLYHTARSLYSRNIDYEALLEEAVDGRELTRAIAYVIRADSPEEES- 63 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 + L GF+ K K F + K+ DV +++DA + ++ +V+ +G Sbjct: 64 ----FFEALVDIGFETRIKDIKTFQDGS----KKADWDVGMSLDAVSLANHVDTVVLCTG 115 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 DG F + L+ + +V + S +S+ L+ D F+D++ + Sbjct: 116 DGDFARVCRYLRHEGCRVEAMGFEES----SSEDLKAAVDGFIDMSDDSDRF 163 >gi|76802672|ref|YP_330767.1| hypothetical protein NP4076A [Natronomonas pharaonis DSM 2160] gi|76558537|emb|CAI50129.1| conserved hypothetical protein [Natronomonas pharaonis DSM 2160] Length = 165 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 39/172 (22%), Positives = 74/172 (43%), Gaps = 14/172 (8%) Query: 3 DPREKIALFIDGANLYASS-KALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 +++A+ D NLY ++ + DY +LL A +IRA Y P +Q Sbjct: 5 HSNQRVAVLADSQNLYHTAHSYYSRNPDYTELLSAAVRDRELIRAIAYVIRADPPTEQ-- 62 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 + L GF+ K K F + K++ D+ + +DA + ++ V+ SG Sbjct: 63 ---EFFEALRDIGFETKIKDIKTFADGT----QKANWDLGMCLDAVTLAPKIDTFVLASG 115 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 DG F L L+ + + + S +++L AD ++D++ ++ Sbjct: 116 DGDFARLCTHLRHEGVRTEVFGFGDS----TAEELIDAADSYVDMSEDEDRF 163 >gi|218246675|ref|YP_002372046.1| hypothetical protein PCC8801_1847 [Cyanothece sp. PCC 8801] gi|257059717|ref|YP_003137605.1| hypothetical protein Cyan8802_1873 [Cyanothece sp. PCC 8802] gi|218167153|gb|ACK65890.1| protein of unknown function DUF88 [Cyanothece sp. PCC 8801] gi|256589883|gb|ACV00770.1| protein of unknown function DUF88 [Cyanothece sp. PCC 8802] Length = 178 Score = 135 bits (341), Expect = 2e-30, Method: Composition-based stats. Identities = 47/175 (26%), Positives = 93/175 (53%), Gaps = 12/175 (6%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIV--IRAYYYTTVVGDPEQQFS 61 P+E++++F+DG N++ + + + D R++L+ F + + + A++YT + + Sbjct: 10 PKERLSIFVDGNNMFYAQQKNSWFFDPRRVLEYFTNDPTITLVNAFWYTGL-----KDSQ 64 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 D L G+ V K+ KE+ + GR K+++D+E+ VD F + + +++FS Sbjct: 65 DQRGFRDALISLGYTVRTKILKEYYDDTSGRYSQKANLDIEIVVDMFNTVDQYDRVILFS 124 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 GDG F + L+ K +T+VST M + +LR D ++DL ++ I + Sbjct: 125 GDGDFERAIELLRSKSTHITVVST----EGMIARELRNATDRYIDLNDIRPHIEK 175 >gi|307153372|ref|YP_003888756.1| hypothetical protein Cyan7822_3539 [Cyanothece sp. PCC 7822] gi|306983600|gb|ADN15481.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7822] Length = 180 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 48/178 (26%), Positives = 94/178 (52%), Gaps = 12/178 (6%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAI--VIRAYYYTTVVGDPEQQF 60 P++++++F+DG N++ + + G+ D R++L F + +I A++YT + + Sbjct: 11 YPKDRLSIFVDGNNMFYAQQKNGWFFDPRRVLDHFTNDPTVTLINAFWYTGL-----KDS 65 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119 D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +++F Sbjct: 66 QDQRGFRDALISLGYTVRTKILKEYYDDSSGRYSQKANLDIEIVVDMFNTVDQYDRVILF 125 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 SGDG F + L+ K +T+VST M + +LR D ++DL ++ I + Sbjct: 126 SGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRTFIEKTD 179 >gi|229523840|ref|ZP_04413245.1| hypothetical protein VCA_001419 [Vibrio cholerae bv. albensis VL426] gi|229337421|gb|EEO02438.1| hypothetical protein VCA_001419 [Vibrio cholerae bv. albensis VL426] Length = 157 Score = 135 bits (340), Expect = 2e-30, Method: Composition-based stats. Identities = 40/166 (24%), Positives = 69/166 (41%), Gaps = 15/166 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 EKIA+ +D N+Y + + G DY + V++A Y + Sbjct: 1 MEKIAILVDVQNVYYTCREQYGRHFDYNQFWSQVTQNRTVVKANAYAIA-----SKAPQQ 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF+V+ K + ++ K DV +A+D +E ++ ++ +V+ SGDG Sbjct: 56 RQFHHILRGIGFEVMLKPFIQRSDGSA----KGDWDVGIALDGYELAQEVDTVVLVSGDG 111 Query: 124 CFTTLVAAL-QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F LV + QR KV + P + + L A F + + Sbjct: 112 DFEPLVTRIAQRFQVKVEV----YGVPKLTAQHLIDVASQFHPIEH 153 >gi|91791739|ref|YP_561390.1| hypothetical protein Sden_0372 [Shewanella denitrificans OS217] gi|91713741|gb|ABE53667.1| protein of unknown function DUF88 [Shewanella denitrificans OS217] Length = 184 Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats. Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 13/165 (7%) Query: 4 PREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 +KIALF+D N+Y + + A G +YRKL + + +++A Y GD Q Sbjct: 27 KSKKIALFVDVQNIYYTCREAYGRQFNYRKLWQLVSQQGEIVQAVAYAIHKGDDGQ---- 82 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 D L + GF+V K + + K DV + +D E + + +++ SGD Sbjct: 83 -LKFQDALKHIGFEVKLKPFIQRADGSA----KGDWDVGITIDVMEAAADVNTVILLSGD 137 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 G F L+ + + K + + V PS+ + L A F + Sbjct: 138 GDFDRLLVKIYQ---KHGVDTQVYGVPSLTAKSLMDSAGQFHPID 179 >gi|119476672|ref|ZP_01616982.1| hypothetical protein GP2143_03548 [marine gamma proteobacterium HTCC2143] gi|119449928|gb|EAW31164.1| hypothetical protein GP2143_03548 [marine gamma proteobacterium HTCC2143] Length = 158 Score = 135 bits (339), Expect = 3e-30, Method: Composition-based stats. Identities = 39/166 (23%), Positives = 71/166 (42%), Gaps = 15/166 (9%) Query: 5 REKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 EK+A+F+D N+Y +++ + DY K S V++A Y T GD Sbjct: 1 MEKVAIFVDVQNVYYTTRQTFRKNFDYNKFWLKACSSREVVKAIAYATDRGD-----QKQ 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 H + L GF+V K + ++ K DV + +D E ++ + +++ SGDG Sbjct: 56 HEFQNILRAIGFEVKLKPFIQRSDGSA----KGDWDVGITIDIMECADDVAVVILVSGDG 111 Query: 124 CFTTLVAALQ-RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F L ++ + K+V + + + L A F+ + Sbjct: 112 DFDLLAQKIRVERGKRVEV----YGVAQLTAKSLINAATEFIPIDK 153 >gi|257389218|ref|YP_003178991.1| hypothetical protein Hmuk_3179 [Halomicrobium mukohataei DSM 12286] gi|257171525|gb|ACV49284.1| protein of unknown function DUF88 [Halomicrobium mukohataei DSM 12286] Length = 165 Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 41/171 (23%), Positives = 78/171 (45%), Gaps = 14/171 (8%) Query: 3 DPREKIALFIDGANLYASSKALG-FDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 P +++ + D NLY ++++L +IDY LL + + RA Y P+++ Sbjct: 5 HPGQRVGVLADAQNLYHTARSLHTRNIDYEALLDEAVNDRALTRAIAYVIRANSPDEES- 63 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 + L GF+ K K F + K+ DV +++DA + ++ +V+ +G Sbjct: 64 ----FFEALEDIGFETRIKDIKTFGDGS----KKADWDVGMSLDAVSLAPHVDTVVLITG 115 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 DG F L L+ + KV + S +++L AD+F +L+ + Sbjct: 116 DGDFARLCRYLRHEGVKVETMGFEES----TAEELVEAADHFRNLSDDAEQ 162 >gi|298492621|ref|YP_003722798.1| hypothetical protein Aazo_4322 ['Nostoc azollae' 0708] gi|298234539|gb|ADI65675.1| protein of unknown function DUF88 ['Nostoc azollae' 0708] Length = 173 Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 49/182 (26%), Positives = 95/182 (52%), Gaps = 13/182 (7%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA---IVIRAYYYTTVVGDPE 57 M ++++F+DG N++ + + G+ D R++L+ F++ +I A++YT + Sbjct: 1 MGSMMNRLSIFVDGNNMFYAQQKNGWFFDPRRVLEYFKNEQPETTLINAFWYTGLKDP-- 58 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHL 116 D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + + Sbjct: 59 ---QDQRGFRDALISLGYTVRTKILKEYYDDVSGRYSQKANLDIEIVVDMFNTVDQYDRV 115 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 V+FSGDG F + L+ K +T+VST M + +LR D ++DL ++++I + Sbjct: 116 VLFSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDQIEKT 171 Query: 177 PD 178 Sbjct: 172 EA 173 >gi|261211879|ref|ZP_05926166.1| hypothetical protein VCJ_002142 [Vibrio sp. RC341] gi|260839229|gb|EEX65861.1| hypothetical protein VCJ_002142 [Vibrio sp. RC341] Length = 157 Score = 135 bits (339), Expect = 4e-30, Method: Composition-based stats. Identities = 43/166 (25%), Positives = 71/166 (42%), Gaps = 15/166 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 EKIA+ +D N+Y + + G DY + V++A Y DP+Q Sbjct: 1 MEKIAILVDVQNVYYTCRERYGRHFDYNQFWSQATQGRAVVKANAYAIASKDPQQ----- 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF+V+ K + ++ K DV +A+D +E ++ + +V+ SGDG Sbjct: 56 RQFHHILRGIGFEVMLKPFIQRSDGSA----KGDWDVGIALDGYELAQEVNTVVLVSGDG 111 Query: 124 CFTTLVAAL-QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F LV + QR KV + P + + L A F + + Sbjct: 112 DFEPLVTRIAQRFQVKVEV----YGVPKLTAQHLIDVASQFHPIEH 153 >gi|229529164|ref|ZP_04418554.1| hypothetical protein VCG_002257 [Vibrio cholerae 12129(1)] gi|229332938|gb|EEN98424.1| hypothetical protein VCG_002257 [Vibrio cholerae 12129(1)] Length = 157 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 40/166 (24%), Positives = 69/166 (41%), Gaps = 15/166 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 EKIA+ +D N+Y + + G DY + V++A Y + Sbjct: 1 MEKIAILVDVQNVYYTCREQYGRHFDYNQFWSQVTQNRTVVKANAYAIA-----SKAPQQ 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF+V+ K + ++ K DV +A+D +E ++ ++ +V+ SGDG Sbjct: 56 RQFHHILRGIGFEVMLKPFIQRSDGSA----KGDWDVGIALDGYELAQEVDTVVLVSGDG 111 Query: 124 CFTTLVAAL-QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F LV + QR KV + P + + L A F + + Sbjct: 112 DFEPLVTRIAQRFQVKVEV----YGVPKLTAQHLIDVASQFHPIEH 153 >gi|27366806|ref|NP_762333.1| hypothetical protein VV2_0365 [Vibrio vulnificus CMCP6] gi|320158689|ref|YP_004191067.1| hypothetical protein VVM_01748 [Vibrio vulnificus MO6-24/O] gi|27358373|gb|AAO07323.1| hypothetical protein VV2_0365 [Vibrio vulnificus CMCP6] gi|319934001|gb|ADV88864.1| hypothetical protein VVMO6_03842 [Vibrio vulnificus MO6-24/O] Length = 162 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 15/170 (8%) Query: 1 MFDPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 M K+A+F+D N+Y + K DY + ++ V+ A+ Y DP Q Sbjct: 1 MRVMTSKVAIFVDVQNIYYTCKEKYRKHFDYNRFWQSATQGKQVVVAHAYAISSKDPGQ- 59 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119 L GF V K + + K DV LA+DAFE + ++ +++ Sbjct: 60 ----RQFHHILRGIGFDVKLKPFIQRWDGSA----KGDWDVGLALDAFEHAPMVDEVILL 111 Query: 120 SGDGCFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 SGDG F LV +Q+K KKVT+ P + + L+ D ++ + Sbjct: 112 SGDGDFEILVERIQQKFGKKVTV----YGVPGLTAQNLQAVVDKYIPIED 157 >gi|104783731|ref|YP_610229.1| hypothetical protein PSEEN4789 [Pseudomonas entomophila L48] gi|95112718|emb|CAK17446.1| conserved hypothetical protein [Pseudomonas entomophila L48] Length = 167 Score = 134 bits (338), Expect = 4e-30, Method: Composition-based stats. Identities = 41/163 (25%), Positives = 66/163 (40%), Gaps = 13/163 (7%) Query: 6 EKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +KIALF D NLY + + G +Y L ++ A Y GD S Sbjct: 10 KKIALFADVQNLYYTVRQVHGCHFNYTTLWAEVSREGQIVEAVAYAIDRGD-----SKQQ 64 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 L GF+V K + + K DV + +D E +E ++ +V+ SGDG Sbjct: 65 QFQQILRNLGFEVRLKPYIQRADGSA----KGDWDVGITLDVIEAAERVDQVVLASGDGD 120 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ K+ + + V P + + L R A ++ + Sbjct: 121 FDLLLERA---AKRHGVETVVYGVPGLTALSLIRSASRYVPIE 160 >gi|153826226|ref|ZP_01978893.1| conserved hypothetical protein [Vibrio cholerae MZO-2] gi|149739991|gb|EDM54166.1| conserved hypothetical protein [Vibrio cholerae MZO-2] Length = 157 Score = 134 bits (338), Expect = 5e-30, Method: Composition-based stats. Identities = 42/166 (25%), Positives = 72/166 (43%), Gaps = 15/166 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 EKIA+ +D N+Y + + G +Y + V++A Y DP+Q Sbjct: 1 MEKIAILVDVQNVYYTCREQYGRHFEYNQFWSQVTQNRTVVKANAYAIASKDPQQ----- 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF+V+ K + ++ K DV +A+D +E ++ ++ +V+ SGDG Sbjct: 56 RQFHHILRGIGFEVMLKPFIQRSDGSA----KGDWDVGIALDGYELAQEVDTVVLVSGDG 111 Query: 124 CFTTLVAAL-QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F LV + QR KV + P + + L A F + + Sbjct: 112 DFEPLVTRIAQRFQVKVEV----YGVPKLTAQHLIDVASQFHPIEH 153 >gi|166368642|ref|YP_001660915.1| hypothetical protein MAE_59010 [Microcystis aeruginosa NIES-843] gi|159030407|emb|CAO91305.1| unnamed protein product [Microcystis aeruginosa PCC 7806] gi|166091015|dbj|BAG05723.1| hypothetical protein MAE_59010 [Microcystis aeruginosa NIES-843] Length = 183 Score = 134 bits (337), Expect = 5e-30, Method: Composition-based stats. Identities = 49/177 (27%), Positives = 95/177 (53%), Gaps = 12/177 (6%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIV--IRAYYYTTVVGDPEQQFS 61 P++++++F+DG N++ + + G+ D RK+L F + + I A++YT + + Sbjct: 15 PKDRLSIFVDGNNMFYAQQKNGWFFDPRKVLNYFTNDPNIMLINAFWYTGL-----KDSQ 69 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +++FS Sbjct: 70 DQRGFRDALISLGYTVRTKILKEYYDDSSGRFSQKANLDIEIVVDMFNTVDQYDRVILFS 129 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 GDG F + L+ K +T+VST M + +LR D ++DL ++ +I + Sbjct: 130 GDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRKDIEKSD 182 >gi|186681406|ref|YP_001864602.1| hypothetical protein Npun_F0925 [Nostoc punctiforme PCC 73102] gi|186463858|gb|ACC79659.1| protein of unknown function DUF88 [Nostoc punctiforme PCC 73102] Length = 169 Score = 134 bits (337), Expect = 5e-30, Method: Composition-based stats. Identities = 48/177 (27%), Positives = 92/177 (51%), Gaps = 13/177 (7%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA---IVIRAYYYTTVVGDPEQQFS 61 ++++F+DG N++ + + G+ D R++L+ F+ +I A++YT + Sbjct: 1 MNRLSIFVDGNNMFYAQQKNGWFFDPRRVLEYFKHEQSETTLINAFWYTGLKDP-----Q 55 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 D L G+ V K+ KE+ + GR K+++D+E+ VD F + + +V+FS Sbjct: 56 DQRGFRDALISLGYTVRTKILKEYYDDTSGRYSQKANLDIEIVVDMFNTVDQYDRVVLFS 115 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 GDG F + L+ K +T+VST M + +LR D ++DL ++++I + Sbjct: 116 GDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDQIEKTE 168 >gi|225848799|ref|YP_002728963.1| RtsE [Sulfurihydrogenibium azorense Az-Fu1] gi|225644319|gb|ACN99369.1| RtsE [Sulfurihydrogenibium azorense Az-Fu1] Length = 174 Score = 133 bits (336), Expect = 7e-30, Method: Composition-based stats. Identities = 46/176 (26%), Positives = 84/176 (47%), Gaps = 14/176 (7%) Query: 3 DPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 +++A+F+D NLY S++ +++ +L+ I++RA+ Y + +Q Sbjct: 6 YNNQRVAVFVDIQNLYYSARDTFNRKVNFESILQKTVGDRILVRAFAYIVKLHGVDQ--- 62 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFT----ENCGRKRVKSSMDVELAVDAFEQSEGLEHLV 117 ++ L + G+QV K K F E +K+ D+ +A+DA ++ ++ V Sbjct: 63 --KGFINTLKHIGYQVREKEPKIFKRLDEEGNLWTTIKADWDMGIAIDAISLADKIDVAV 120 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 + +GDG F LV LQ K KV I + + + +L AD F+DL +I Sbjct: 121 LTTGDGDFKDLVKYLQTKGVKVEIAAFKQT----TAKELIEAADEFIDLNIYGEDI 172 >gi|220910043|ref|YP_002485354.1| hypothetical protein Cyan7425_4688 [Cyanothece sp. PCC 7425] gi|219866654|gb|ACL46993.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7425] Length = 172 Score = 133 bits (336), Expect = 8e-30, Method: Composition-based stats. Identities = 49/172 (28%), Positives = 91/172 (52%), Gaps = 12/172 (6%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA--IVIRAYYYTTVVGDPEQQFSPLH 64 ++++F+DG N++ + + G+ D R++L F S ++ A++YT + Sbjct: 7 RVSIFVDGNNMFYAQQKNGWFFDPRRVLDYFTSEPSVTLVNAFWYTGLKDP-----QDQR 61 Query: 65 PLLDWLHYNGFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 D L G+ V K+ KE+ +N GR K+++D+E+ VD F E + +++FSGDG Sbjct: 62 GFRDALISLGYTVRTKILKEYYDDNSGRYSQKANLDIEIVVDMFNTVEQYDRVILFSGDG 121 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 F + L+ K +T+VST M + +LR D ++DL ++ +I + Sbjct: 122 DFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRPKIEK 169 >gi|163785396|ref|ZP_02180018.1| hypothetical protein HG1285_09231 [Hydrogenivirga sp. 128-5-R1-1] gi|159879334|gb|EDP73216.1| hypothetical protein HG1285_09231 [Hydrogenivirga sp. 128-5-R1-1] Length = 186 Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats. Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 15/174 (8%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-----EQQ 59 EKIA+FID N++ +S I+Y+KL++ R ++RAY+YT V ++Q Sbjct: 21 DEKIAIFIDAGNMFHASNYYKIKINYKKLVEFLRRDRWLLRAYFYTGVPTQDLDKSLKEQ 80 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLV 117 + L+ L G +V K+ E ++ +DV LA D + + + Sbjct: 81 WKKQKGFLNELQNLGIKVKTMPLKKTPEGF----IEKGVDVLLATDMVSLAFRNAYDTAI 136 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 + SGD + +V +Q K+V S + +S +LR+ D F+ L + Sbjct: 137 LVSGDSDYVPVVEEIQELGKRVENASFKRT----SSFELRKVCDRFILLDNFMD 186 >gi|119356319|ref|YP_910963.1| hypothetical protein Cpha266_0482 [Chlorobium phaeobacteroides DSM 266] gi|119353668|gb|ABL64539.1| protein of unknown function DUF88 [Chlorobium phaeobacteroides DSM 266] Length = 287 Score = 133 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 52/171 (30%), Positives = 89/171 (52%), Gaps = 9/171 (5%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 ++ A++IDGANL+ + ++LG+ ID+ +L+ F R + A YY V ++ + Sbjct: 4 KRAAVYIDGANLFFTQRSLGWQIDFSRLITFFLDRYASVEARYYVPVSEPASEEQAA--- 60 Query: 66 LLDWLHYNGFQVVAKVAKEFTE-NCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 L +G+ + +K K+ G +K ++DVELAVDA + ++FSGD Sbjct: 61 FTRVLAAHGYILTSKPVKKIVNKTTGEIIIKGNLDVELAVDALVGEIAYDTFILFSGDSD 120 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQ-LRRQADYFMDLAYLKNEIA 174 F L+ AL+ K K+V + ST +++ + L F DLA L++ I Sbjct: 121 FLPLLRALKEKGKEVLVYST----EGISAWELLIEPGIDFHDLAGLRDRIG 167 >gi|260769223|ref|ZP_05878156.1| hypothetical protein VFA_002281 [Vibrio furnissii CIP 102972] gi|260614561|gb|EEX39747.1| hypothetical protein VFA_002281 [Vibrio furnissii CIP 102972] gi|315181763|gb|ADT88676.1| hypothetical protein vfu_B00438 [Vibrio furnissii NCTC 11218] Length = 157 Score = 133 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 38/165 (23%), Positives = 68/165 (41%), Gaps = 15/165 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 E IA+ +D N+Y + K +Y + + V++A Y D S Sbjct: 1 METIAILVDVQNVYYTCKERYQRHFNYNHFWQQVTNGRHVVKANAYAIASND-----SRQ 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF+V+ K + ++ K DV + +DA E + ++ +V+ SGDG Sbjct: 56 RQFHHILRGIGFEVMLKPYIQRSDGSA----KGDWDVGITLDAIELAPDVDTVVLVSGDG 111 Query: 124 CFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L +Q K K+V + P + + L A+ ++ + Sbjct: 112 DFDILAKRIQDKYGKQVEV----YGVPGLTARSLVDAANRYVTIE 152 >gi|37676581|ref|NP_936977.1| hypothetical protein VVA0921 [Vibrio vulnificus YJ016] gi|37201124|dbj|BAC96947.1| uncharacterized conserved protein [Vibrio vulnificus YJ016] Length = 162 Score = 133 bits (334), Expect = 1e-29, Method: Composition-based stats. Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 15/170 (8%) Query: 1 MFDPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 M K+A+F+D N+Y + K DY + ++ V+ A+ Y DP Q Sbjct: 1 MRVMTSKVAIFVDVQNIYYTCKEKYRKHFDYNRFWQSATQDKQVVVAHAYAISSKDPGQ- 59 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119 L GF V K + + K DV LA+DAFE + ++ +++ Sbjct: 60 ----RQFHHILRGIGFDVKLKPFIQRWDGSA----KGDWDVGLALDAFEHAPMVDEVILL 111 Query: 120 SGDGCFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 SGDG F LV +Q+K KKVT+ P + + L+ D ++ + Sbjct: 112 SGDGDFEILVERIQQKFGKKVTV----YGVPGLTAQNLQAVVDKYIPIED 157 >gi|146284019|ref|YP_001174172.1| hypothetical protein PST_3707 [Pseudomonas stutzeri A1501] gi|145572224|gb|ABP81330.1| conserved hypothetical protein [Pseudomonas stutzeri A1501] Length = 197 Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats. Identities = 41/163 (25%), Positives = 68/163 (41%), Gaps = 14/163 (8%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +KIALF D NLY + + A G +Y L R ++ AY Y GDP Sbjct: 41 KKIALFADVQNLYYTVRQAHGCHFNYSALWADVSRRGTIVEAYAYAIERGDP-----RQQ 95 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 L GF V K + ++ K DV + +D + + ++ +V+ SGDG Sbjct: 96 QFQQILRKLGFTVKLKPYIQRSDGSA----KGDWDVGITIDVLDAAARVDEVVLASGDGD 151 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ ++ + +T P + + L R A ++ + Sbjct: 152 FDLLLERVRAGGAE----ATAYGVPGLTAQSLIRAATRYVPVE 190 >gi|189347490|ref|YP_001944019.1| hypothetical protein Clim_2008 [Chlorobium limicola DSM 245] gi|189341637|gb|ACD91040.1| protein of unknown function DUF88 [Chlorobium limicola DSM 245] Length = 304 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 56/177 (31%), Positives = 93/177 (52%), Gaps = 9/177 (5%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +K ALFIDGANL+ + + LG+ ID+ +L+ F +R V+ A YY P + Sbjct: 29 SMQKAALFIDGANLFYTQRHLGWQIDFSRLMLYFTNRYTVVSARYYVPSPDPPSEDQVA- 87 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 L +GF++++K K+ G +K ++D+ELAVDA E V+FSGD Sbjct: 88 --FNRVLITHGFEIISKPVKKIVNRDTGEIIMKGNLDIELAVDAMLTEHQFEVFVLFSGD 145 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD-YFMDLAYLKNEIARDPD 178 F L+ A+Q K K V++ ST +++ +L +D F D++ + E+++ Sbjct: 146 SDFLPLIMAMQMKGKTVSVFST----RGISARELYSGSDMDFHDISLMAVEMSQSQS 198 >gi|237755695|ref|ZP_04584304.1| RtsE [Sulfurihydrogenibium yellowstonense SS-5] gi|237692145|gb|EEP61144.1| RtsE [Sulfurihydrogenibium yellowstonense SS-5] Length = 174 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 47/176 (26%), Positives = 83/176 (47%), Gaps = 14/176 (7%) Query: 3 DPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 +++A+F+D NLY S++ +++ +L I++RA+ Y + +Q Sbjct: 6 YNNQRVAIFVDIQNLYYSARDTFNRKVNFESILYKTLGDRILVRAFAYIVKLQGVDQ--- 62 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFT----ENCGRKRVKSSMDVELAVDAFEQSEGLEHLV 117 ++ L + G+QV K K F E +K+ D+ +A+DA SE ++ + Sbjct: 63 --KGFINTLKHIGYQVREKEPKIFKRLDEEGNLWTTIKADWDMGIAIDAIALSEKIDVAI 120 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 + +GDG F LV LQ K KV I + + + +L AD F+DL +I Sbjct: 121 LTTGDGDFKDLVKYLQTKGVKVEIAAFKQT----TAKELIEVADEFIDLTTFGEDI 172 >gi|158333892|ref|YP_001515064.1| hypothetical protein AM1_0704 [Acaryochloris marina MBIC11017] gi|158304133|gb|ABW25750.1| conserved hypothetical protein [Acaryochloris marina MBIC11017] Length = 172 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 45/174 (25%), Positives = 88/174 (50%), Gaps = 12/174 (6%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRS--RAIVIRAYYYTTVVGDPEQQFSPLH 64 + ++F+DG N++ + + G+ D R++L F +I A++YT + Sbjct: 7 RTSIFVDGNNMFYAQQKNGWFFDPRRILNYFTEPTDVRLINAFWYTGLKDP-----QDQR 61 Query: 65 PLLDWLHYNGFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 D L G+ V K+ KE+ ++ GR K+++D+E+ +D F + + +++ SGDG Sbjct: 62 GFRDALISLGYTVRTKILKEYYDDSSGRYSQKANLDIEIVIDMFNTVDQYDQVILLSGDG 121 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 F + L+ K +T+VST M + +LR D ++DL +++ I + Sbjct: 122 DFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNKIRDRIEKTE 171 >gi|67925984|ref|ZP_00519254.1| Protein of unknown function DUF88 [Crocosphaera watsonii WH 8501] gi|67852173|gb|EAM47662.1| Protein of unknown function DUF88 [Crocosphaera watsonii WH 8501] Length = 178 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 49/175 (28%), Positives = 93/175 (53%), Gaps = 12/175 (6%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAI--VIRAYYYTTVVGDPEQQFS 61 +E++++F+DG N++ + + G+ D R++L F + +I A++YT + + Sbjct: 10 QKERLSIFVDGNNMFYAQQKNGWFFDPRRVLDYFTNDPHVSLINAFWYTGL-----KDSQ 64 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 D L G+ V K+ KE+ + GR K+++D+E+ VD F + + +++FS Sbjct: 65 DQRGFRDALISLGYTVRTKILKEYYDDTSGRYSQKANLDIEIVVDMFNTVDQYDRVILFS 124 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 GDG F + L+ K +T+VST M + +LR D ++DL +K+ I + Sbjct: 125 GDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIKDSIEK 175 >gi|24374996|ref|NP_719039.1| hypothetical protein SO_3490 [Shewanella oneidensis MR-1] gi|24349728|gb|AAN56483.1|AE015785_6 conserved hypothetical protein [Shewanella oneidensis MR-1] Length = 157 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 38/165 (23%), Positives = 71/165 (43%), Gaps = 13/165 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 KIALF+D N+Y + + A +YRKL + ++ ++ A Y GD Q Sbjct: 1 MNKIALFVDVQNIYYTCREAYQRQFNYRKLWQHLSTQGEIVSAVAYAIHRGDDGQ----- 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 D L + GF++ K + ++ K DV + +D + + ++ +++ SGDG Sbjct: 56 LKFQDALRHIGFELKLKPFIQRSDGSA----KGDWDVGITIDVLDAAPNVDTVILLSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F L+ + + K + + V P + + L F + Sbjct: 112 DFAILLEKITQ---KYGVKAEVYGVPQLTAKALMDATTQFNPIDD 153 >gi|86607567|ref|YP_476329.1| hypothetical protein CYB_0065 [Synechococcus sp. JA-2-3B'a(2-13)] gi|86556109|gb|ABD01066.1| conserved hypothetical protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 175 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 51/184 (27%), Positives = 91/184 (49%), Gaps = 15/184 (8%) Query: 1 MFDPRE--KIALFIDGANLYASSKALGFDIDYRKLLKAFRS---RAIVIRAYYYTTVVGD 55 MF ++++FIDG N++ + + G+ D R++L F ++ A++YT + Sbjct: 1 MFYHHPVTRVSIFIDGNNMFYAQQKNGWFFDPRRVLDYFVRSQPNVELVNAFWYTGIKDP 60 Query: 56 PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLE 114 +Q D L GF V K+ KE+ + GR K+++D+E+ +D F + Sbjct: 61 HDQ-----RAFRDALISMGFTVRTKILKEYRDEDSGRYSQKANLDIEIVIDMFNTVGQYD 115 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 +++FSGDG F V L+ K +T+VST M + +LR D ++DL ++ I Sbjct: 116 RIILFSGDGDFERAVELLRSKNTLITVVST----EGMIARELRNATDRYIDLNDIRPYIE 171 Query: 175 RDPD 178 + Sbjct: 172 KLDK 175 >gi|163751027|ref|ZP_02158258.1| hypothetical protein KT99_04722 [Shewanella benthica KT99] gi|161329188|gb|EDQ00187.1| hypothetical protein KT99_04722 [Shewanella benthica KT99] Length = 159 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 40/165 (24%), Positives = 76/165 (46%), Gaps = 13/165 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIA+F+D N+Y + + A G +YRKL + + ++ A Y GD Q Sbjct: 3 NKKIAIFVDVQNIYYTCRQAYGRQFNYRKLWQHIGHKGDIVSATAYAIHKGDEGQ----- 57 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 D L + GF + K + ++ K DV +A+D E + ++ +++ SGDG Sbjct: 58 LKFQDALKHIGFDIKLKPFIQRSDGSA----KGDWDVGIAIDVMEAAAEVDTIILLSGDG 113 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F L+ + + K + + V P++ + L + F+++ Sbjct: 114 DFDLLMLKIYQ---KYGVDTQVYGVPALTAKSLIDASCKFIEIDE 155 >gi|330504961|ref|YP_004381830.1| hypothetical protein MDS_4047 [Pseudomonas mendocina NK-01] gi|328919247|gb|AEB60078.1| hypothetical protein MDS_4047 [Pseudomonas mendocina NK-01] Length = 159 Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats. Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 14/164 (8%) Query: 5 REKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIA+F D NLY + + G DY L R +++ AY Y GD +QQ Sbjct: 1 MKKIAVFADVQNLYYTVRQVHGCHFDYSVLWAEVSRRGVIVEAYAYAIDRGDAKQQQ--- 57 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + + K DV + +D + E ++ +V+ SGDG Sbjct: 58 --FQQILRKLGFTVKLKPYIQRADGSA----KGDWDVGITIDVLDAVERVDEIVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ ++ + + + P + + L R A ++ + Sbjct: 112 DFDLLLERVRSRG----VEAIAFGAPGLTAQSLIRAASLYVPIE 151 >gi|172038230|ref|YP_001804731.1| hypothetical protein cce_3317 [Cyanothece sp. ATCC 51142] gi|171699684|gb|ACB52665.1| unknown [Cyanothece sp. ATCC 51142] Length = 178 Score = 132 bits (331), Expect = 2e-29, Method: Composition-based stats. Identities = 49/175 (28%), Positives = 93/175 (53%), Gaps = 12/175 (6%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAI--VIRAYYYTTVVGDPEQQFS 61 +E++++F+DG N++ + + G+ D R++L F + +I A++YT + + Sbjct: 10 QKERLSIFVDGNNMFYAQQKNGWFFDPRRVLDYFTNDPHVSLINAFWYTGL-----KDSQ 64 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 D L G+ V K+ KE+ + GR K+++D+E+ VD F + + +++FS Sbjct: 65 DQRGFRDALISLGYTVRTKILKEYYDDTSGRYSQKANLDIEIVVDMFNTVDQYDRVILFS 124 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 GDG F + L+ K +T+VST M + +LR D ++DL +K+ I + Sbjct: 125 GDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIKDSIEK 175 >gi|114766684|ref|ZP_01445623.1| hypothetical protein 1100011001297_R2601_11634 [Pelagibaca bermudensis HTCC2601] gi|114541074|gb|EAU44129.1| hypothetical protein R2601_11634 [Roseovarius sp. HTCC2601] Length = 117 Score = 132 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 52/104 (50%), Positives = 76/104 (73%) Query: 77 VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKV 136 +V K AKE+T++ GR++VK +MD+EL VDA E + ++H+V+FSGDG F LV +LQR+ Sbjct: 1 MVTKPAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHIVLFSGDGDFRPLVESLQRQG 60 Query: 137 KKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 +V++VST+ S P M +D+LRRQAD F++L L+ I R P E Sbjct: 61 VRVSVVSTIRSQPPMIADELRRQADNFIELDELREVIGRPPREQ 104 >gi|86605299|ref|YP_474062.1| hypothetical protein CYA_0583 [Synechococcus sp. JA-3-3Ab] gi|86553841|gb|ABC98799.1| conserved hypothetical protein [Synechococcus sp. JA-3-3Ab] Length = 174 Score = 132 bits (331), Expect = 3e-29, Method: Composition-based stats. Identities = 52/183 (28%), Positives = 92/183 (50%), Gaps = 14/183 (7%) Query: 1 MF-DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRS---RAIVIRAYYYTTVVGDP 56 MF P ++++FIDG N++ + + G+ D R++L F ++ A++YT + Sbjct: 1 MFRHPVTRVSIFIDGNNMFYAQQKNGWFFDPRRVLDYFVRSQPNVELVNAFWYTGIKDPN 60 Query: 57 EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEH 115 +Q D L GF V K+ KE+ + GR K+++D+E+ +D F + Sbjct: 61 DQ-----RAFRDALISLGFTVRTKILKEYRDEDSGRYSQKANLDIEIVIDMFNTVGQYDR 115 Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 +++FSGDG F V L+ K +T+VST M + +LR D ++DL ++ I + Sbjct: 116 IILFSGDGDFERAVELLRSKNTLITVVST----EGMIARELRNATDRYIDLNDIRPYIEK 171 Query: 176 DPD 178 Sbjct: 172 LDK 174 >gi|293605834|ref|ZP_06688205.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] gi|292815747|gb|EFF74857.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] Length = 673 Score = 131 bits (330), Expect = 3e-29, Method: Composition-based stats. Identities = 45/187 (24%), Positives = 69/187 (36%), Gaps = 25/187 (13%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M P E + ALF D N+ + + D R +L+ + ++ Y Sbjct: 10 MTTPNENVSMALFCDFENVALGVRDTKYQKFDIRPVLERLLLKGSIVVKKAYC------- 62 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114 + +H F+++ R+ K+S D+ L VDA + + Sbjct: 63 -DWERYKEFKAPMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDFCYTKSHVN 114 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ KKV V SD L D F+ L EI Sbjct: 115 TFVIISGDSDFSPLVSKLRENNKKVIGV----GVKQSTSDLLIANCDEFIFYDDLAREIQ 170 Query: 175 RDPDEDK 181 R D + Sbjct: 171 RTADARR 177 >gi|113477728|ref|YP_723789.1| hypothetical protein Tery_4322 [Trichodesmium erythraeum IMS101] gi|110168776|gb|ABG53316.1| protein of unknown function DUF88 [Trichodesmium erythraeum IMS101] Length = 171 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 49/179 (27%), Positives = 92/179 (51%), Gaps = 11/179 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA-IVIRAYYYTTVVGDPEQQ 59 M ++++F+DG N++ + + G+ D R++L+ F +I A++YT + Sbjct: 1 MKISMNRLSIFVDGNNMFYAQQKNGWFFDPRRVLEYFNKPEVKLINAFWYTGLKDP---- 56 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLVI 118 D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +V+ Sbjct: 57 -QDQRGFRDALISLGYTVRTKILKEYYDDVSGRYSQKANLDIEIVVDMFNTVDQYDEVVL 115 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 FSGDG F + L+ K +T+VST M + +LR D ++DL ++ +I + Sbjct: 116 FSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDQYVDLNDIRYQIEKAE 170 >gi|15605762|ref|NP_213139.1| hypothetical protein aq_200 [Aquifex aeolicus VF5] gi|2982933|gb|AAC06550.1| hypothetical protein aq_200 [Aquifex aeolicus VF5] Length = 208 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 45/179 (25%), Positives = 78/179 (43%), Gaps = 17/179 (9%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVG--------DP 56 E++ +FIDG+NL+ + L +DY KL++ R ++RAY+YT V Sbjct: 2 NERLMIFIDGSNLFHGIRYLNIKVDYSKLVEFLREGRYLVRAYFYTAVPQEKDIKKGTPE 61 Query: 57 EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LE 114 LD L + G +V ++ + ++ +D+ LA D + + Sbjct: 62 WDSLQRQKRFLDELSFMGIKVKTAHLRKLPSG---EYLEKEVDIMLATDMLSLAYRNAYD 118 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 V+ SGD F V A+Q K+V + + +S LR+ D F+ L ++I Sbjct: 119 TAVLVSGDSDFIHTVEAVQSLGKRVENATFKKT----SSYNLRKVCDRFILLDDHLDKI 173 >gi|16332216|ref|NP_442944.1| hypothetical protein slr0755 [Synechocystis sp. PCC 6803] gi|1653846|dbj|BAA18756.1| slr0755 [Synechocystis sp. PCC 6803] Length = 185 Score = 131 bits (330), Expect = 4e-29, Method: Composition-based stats. Identities = 47/174 (27%), Positives = 91/174 (52%), Gaps = 12/174 (6%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA--IVIRAYYYTTVVGDPEQQFSP 62 R+++++F+DG N++ + + G+ D R++L F ++ A++YT + Sbjct: 11 RDRLSIFVDGNNMFYAQQKNGWFFDPRRVLSFFTEDPSVKLVNAFWYTGLKDT-----QD 65 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 D L G+ V K+ KE+ ++ G+ K+++D+E+ VD F + + +V+FSG Sbjct: 66 QRGFRDALISLGYTVRTKILKEYYDDISGKYSQKANLDIEIVVDMFNTVDQYDRVVLFSG 125 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 DG F + L+ K +T+VST M + +LR D ++DL ++ I + Sbjct: 126 DGDFERAIELLRSKSTHITVVST----EGMIARELRNATDRYIDLNDIRPAIEK 175 >gi|260778792|ref|ZP_05887684.1| hypothetical protein VIC_004198 [Vibrio coralliilyticus ATCC BAA-450] gi|260604956|gb|EEX31251.1| hypothetical protein VIC_004198 [Vibrio coralliilyticus ATCC BAA-450] Length = 160 Score = 131 bits (329), Expect = 4e-29, Method: Composition-based stats. Identities = 39/166 (23%), Positives = 68/166 (40%), Gaps = 15/166 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 EK+A+F+D N+Y +++ + DY + V A+ Y DP Sbjct: 1 MEKVAIFVDVQNIYYTTREKYRANFDYNEFWYVATEGRDVTEAHAYAIASHDP-----KQ 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + + K DV +A+D +E + ++ +++ SGDG Sbjct: 56 RQFHHILRGIGFNVKLKPFIQRQDGSA----KGDWDVGIALDVYEAASKVDRVILLSGDG 111 Query: 124 CFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F LV +Q + KV + P +++ L D F+ + Sbjct: 112 DFDVLVKRVQERFGTKVDVF----GVPGLSAQSLIDVCDKFIPIEE 153 >gi|320450466|ref|YP_004202562.1| hypothetical protein TSC_c13940 [Thermus scotoductus SA-01] gi|320150635|gb|ADW22013.1| hypothetical protein TSC_c13940 [Thermus scotoductus SA-01] Length = 178 Score = 131 bits (329), Expect = 4e-29, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 74/181 (40%), Gaps = 10/181 (5%) Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 P +++ +F+D NLY S++ ++++ LL+ ++RA Y + Sbjct: 6 HPDQRVGVFVDTQNLYHSARDYYERNVNFESLLRFAVGGRRLVRATAYVVEKEGDTSAW- 64 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFT-ENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 P + L G++V G+ + + D+ +A D L+ +V+ S Sbjct: 65 ---PFIYKLSTIGYRVRRMYLTVKELGEGGKPIYEGNWDMGIAADMVRLMPHLDVVVLGS 121 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F ++ L + +V +++ + +L D F+ L + N + + Sbjct: 122 GDGDFVEILEVLMERGIRVEVIAF----RETTAQKLIDAVDRFVHLPDIPNAFMEPKNTE 177 Query: 181 K 181 + Sbjct: 178 R 178 >gi|170719838|ref|YP_001747526.1| hypothetical protein PputW619_0652 [Pseudomonas putida W619] gi|169757841|gb|ACA71157.1| protein of unknown function DUF88 [Pseudomonas putida W619] Length = 159 Score = 131 bits (329), Expect = 4e-29, Method: Composition-based stats. Identities = 41/165 (24%), Positives = 67/165 (40%), Gaps = 15/165 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIALF D NLY + + A G +Y L ++ A Y GD S Sbjct: 1 MKKIALFADVQNLYYTVRQAHGCHFNYTALWSEVSREGEIVEAVAYAIDRGD-----SKQ 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D + + ++ +V+ SGDG Sbjct: 56 QQFQQILRNLGFDVRLKPFIQRSDGSA----KGDWDVGITLDVIDAASRVDQVVLASGDG 111 Query: 124 CFTTLVAA-LQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ +QR + + V P + + L R A ++ + Sbjct: 112 DFDLLLERVIQRHGAE----AVVYGVPGLTAMSLIRAASRYVPIE 152 >gi|170077971|ref|YP_001734609.1| hypothetical protein SYNPCC7002_A1357 [Synechococcus sp. PCC 7002] gi|169885640|gb|ACA99353.1| Protein of unknown function (PF01936) [Synechococcus sp. PCC 7002] Length = 172 Score = 131 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 49/180 (27%), Positives = 92/180 (51%), Gaps = 12/180 (6%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA--IVIRAYYYTTVVGDPEQ 58 M + ++++F+DG N++ + + + D R++L F +I A++YT + + Sbjct: 1 MNFYQRRLSIFVDGNNMFYAQQKNNWFFDPRRVLDYFTCDPTVRLINAFWYTGL-----K 55 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLV 117 D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + ++ Sbjct: 56 DSQDQRGFRDALISLGYTVRTKILKEYYDDVSGRYSQKANLDIEIVVDMFNTVDQYDQVI 115 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 +FSGDG F + L+ K +T+VST M + +LR D ++DL L+ EI + Sbjct: 116 LFSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDCYIDLNNLRAEIEKTE 171 >gi|146308745|ref|YP_001189210.1| hypothetical protein Pmen_3730 [Pseudomonas mendocina ymp] gi|145576946|gb|ABP86478.1| protein of unknown function DUF88 [Pseudomonas mendocina ymp] Length = 159 Score = 131 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 41/164 (25%), Positives = 68/164 (41%), Gaps = 14/164 (8%) Query: 5 REKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIA+F D NLY + + G DY L R ++ AY Y GD +QQ Sbjct: 1 MKKIAVFADVQNLYYTVRQVHGCHFDYSVLWAEVSRRGVIAEAYAYAIDRGDAKQQQ--- 57 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + + K DV + +D + E ++ +V+ SGDG Sbjct: 58 --FQQILRKLGFTVKLKPYIQRADGSA----KGDWDVGITIDVLDALERVDEIVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ ++ + + + P + + L R A ++ + Sbjct: 112 DFDLLLERVRSRG----VEAIAFGVPGLTAQSLIRAASLYVPIE 151 >gi|86146656|ref|ZP_01064977.1| hypothetical protein MED222_07105 [Vibrio sp. MED222] gi|218676438|ref|YP_002395257.1| hypothetical protein VS_II0673 [Vibrio splendidus LGP32] gi|85835503|gb|EAQ53640.1| hypothetical protein MED222_07105 [Vibrio sp. MED222] gi|218324706|emb|CAV26328.1| Conserved hypothetical protein [Vibrio splendidus LGP32] Length = 157 Score = 131 bits (329), Expect = 5e-29, Method: Composition-based stats. Identities = 40/166 (24%), Positives = 66/166 (39%), Gaps = 15/166 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 E IA+ +D N+Y +++ + DY + V+ A Y DP Sbjct: 1 MENIAILVDVQNVYYTTRDKYRSNFDYNQFWYVATEGRNVVEANAYAISSQDP-----KQ 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + + K DV +A+DA E +E ++ +V+ SGDG Sbjct: 56 RQFHHILRGVGFNVKLKPFIQRRDGSA----KGDWDVGIALDAIELAETVDTIVLVSGDG 111 Query: 124 CFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F LV ++ + K V + P + + L A F+ + Sbjct: 112 DFEILVERIKERFGKPVEV----YGVPGLTAQNLIDSASKFVPIEK 153 >gi|26991450|ref|NP_746875.1| hypothetical protein PP_4769 [Pseudomonas putida KT2440] gi|148549846|ref|YP_001269948.1| hypothetical protein Pput_4644 [Pseudomonas putida F1] gi|24986525|gb|AAN70339.1|AE016675_9 conserved hypothetical protein [Pseudomonas putida KT2440] gi|148513904|gb|ABQ80764.1| protein of unknown function DUF88 [Pseudomonas putida F1] Length = 159 Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats. Identities = 41/165 (24%), Positives = 68/165 (41%), Gaps = 15/165 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIALF D NLY + + A G +Y L ++ A Y GD S Sbjct: 1 MKKIALFADVQNLYYTVRQAHGCHFNYTALWADVSREGQIVEAVAYAIDRGD-----SKQ 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF+V K + ++ K DV + +D + + ++ +V+ SGDG Sbjct: 56 QQFQQILRNLGFEVRLKPFIQRSDGSA----KGDWDVGITLDVIDAASRVDQVVLASGDG 111 Query: 124 CFTTLVAA-LQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ +QR + + V P + + L R A ++ + Sbjct: 112 DFDLLLERVIQRHGTE----AVVYGVPGLTALSLIRAATRYVPIE 152 >gi|311106775|ref|YP_003979628.1| hypothetical protein AXYL_03593 [Achromobacter xylosoxidans A8] gi|310761464|gb|ADP16913.1| hypothetical protein AXYL_03593 [Achromobacter xylosoxidans A8] Length = 576 Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats. Identities = 44/187 (23%), Positives = 68/187 (36%), Gaps = 25/187 (13%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M P E + ALF D N+ + + D R +L+ + ++ Y Sbjct: 1 MNTPNENVSMALFCDFENVALGVRDTKYQKFDIRPVLERLLLKGSIVVKKAYC------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114 + +H F+++ R+ K+S D+ L VDA + + Sbjct: 54 -DWERYKEFKAPMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDFCYTKSHVN 105 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ KKV V SD L D F+ L E Sbjct: 106 TFVIISGDSDFSPLVSKLRENNKKVIGV----GVKQSTSDLLIANCDEFIFYDDLAREGQ 161 Query: 175 RDPDEDK 181 R D + Sbjct: 162 RAADARR 168 >gi|254481697|ref|ZP_05094940.1| conserved hypothetical protein [marine gamma proteobacterium HTCC2148] gi|214037826|gb|EEB78490.1| conserved hypothetical protein [marine gamma proteobacterium HTCC2148] Length = 200 Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats. Identities = 42/163 (25%), Positives = 72/163 (44%), Gaps = 13/163 (7%) Query: 6 EKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 EKI +F+D N+Y + + G + DY K ++ AY Y T GD + Sbjct: 44 EKITIFVDVQNIYYTCRQTYGRNFDYNKFWAEVTQNRELVGAYAYATDRGD-----AKQM 98 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 LH GF V K + + K+ D+ +A+D +E ++ + +V+ +GDG Sbjct: 99 QFQSILHAIGFTVKLKPVLKRRDGS----TKADWDIGIALDVYEAAQQCDTVVLLTGDGD 154 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ ++R + V P++ SD L A F+ + Sbjct: 155 FGLLLDRIKR---RFDTNCEVYGVPALTSDILISAASRFVPID 194 >gi|163783881|ref|ZP_02178857.1| hypothetical protein HG1285_05285 [Hydrogenivirga sp. 128-5-R1-1] gi|159880844|gb|EDP74372.1| hypothetical protein HG1285_05285 [Hydrogenivirga sp. 128-5-R1-1] Length = 174 Score = 130 bits (328), Expect = 7e-29, Method: Composition-based stats. Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 14/176 (7%) Query: 3 DPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 +++A+F+D NLY S++ +D+ K+L + +IRA Y + +Q Sbjct: 6 YKNQRVAVFLDVQNLYYSARDVFNRKVDFEKVLFKILNGRQLIRALAYIIKLQGVDQ--- 62 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFT----ENCGRKRVKSSMDVELAVDAFEQSEGLEHLV 117 + L + G+++ K K + E +K+ D+ +A+DA +E ++ V Sbjct: 63 --KGFISSLKHIGYEIKEKEPKIYKRLDEEGNLITTIKADWDMGIAMDAISIAEKIDVAV 120 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 + +GDG F LV L K KV I + + + +L D F+DL + EI Sbjct: 121 LTTGDGDFADLVKYLHTKGVKVEIAAFKQT----TAKELIEVCDEFIDLTHFGEEI 172 >gi|193782651|ref|NP_435936.2| hypothetical protein SMa1264 [Sinorhizobium meliloti 1021] gi|46403700|gb|AAS92906.1| hypothetical protein [Sinorhizobium meliloti] gi|193073107|gb|AAK65348.2| Conserved hypothetical protein [Sinorhizobium meliloti 1021] Length = 177 Score = 130 bits (328), Expect = 7e-29, Method: Composition-based stats. Identities = 70/133 (52%), Positives = 99/133 (74%), Gaps = 2/133 (1%) Query: 47 YYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA 106 YY +V D Q+ + L+DWL YNG+Q+V K +EFT+ GR+R+K +MD++LA+DA Sbjct: 30 NYYAPLVED--QETPTIRLLIDWLDYNGYQMVTKPIREFTDTLGRRRIKGNMDIDLAIDA 87 Query: 107 FEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 E ++ +HLVIFSGDG FT++VAALQRK +VT+VST+ + P M S +LRR+AD+F+DL Sbjct: 88 IELAKTADHLVIFSGDGNFTSVVAALQRKGCRVTVVSTMATRPPMISGELRREADHFIDL 147 Query: 167 AYLKNEIARDPDE 179 A L+ EIAR+ E Sbjct: 148 AKLRGEIAREHAE 160 >gi|294139934|ref|YP_003555912.1| hypothetical protein SVI_1163 [Shewanella violacea DSS12] gi|293326403|dbj|BAJ01134.1| conserved hypothetical protein [Shewanella violacea DSS12] Length = 159 Score = 130 bits (328), Expect = 7e-29, Method: Composition-based stats. Identities = 40/165 (24%), Positives = 75/165 (45%), Gaps = 13/165 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIA+F+D N+Y + + A G +YRKL + ++ A Y GD Q Sbjct: 3 NKKIAIFVDVQNIYYTCRQAYGRQFNYRKLWQHIIHEGDIVSATAYAIHKGDDGQ----- 57 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 D L + GF + K + ++ K DV +A+D E + ++ +++ SGDG Sbjct: 58 LKFQDALKHIGFDIKLKPFIQRSDGSA----KGDWDVGIAIDVMEAATEVDTIILLSGDG 113 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F L+ + + K + + V P++ + L + F+++ Sbjct: 114 DFDLLMLKVYQ---KYGVDTQVYGVPALTAKSLIDASCKFIEIDE 155 >gi|82703323|ref|YP_412889.1| hypothetical protein Nmul_A2205 [Nitrosospira multiformis ATCC 25196] gi|82411388|gb|ABB75497.1| Protein of unknown function DUF88 [Nitrosospira multiformis ATCC 25196] Length = 381 Score = 130 bits (328), Expect = 7e-29, Method: Composition-based stats. Identities = 41/185 (22%), Positives = 68/185 (36%), Gaps = 25/185 (13%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M +E + A+F D N+ + + D + +L+ + ++ Y Sbjct: 1 MATLQENVSMAVFCDFENVALGVRDAKYEKFDIKPVLERLLLKGSIVIKKAYC------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114 + LH F+++ R+ K+S D+ L VDA + + Sbjct: 54 -DWDRYKTFKTALHEANFELIEIPHI-------RQSGKNSADIRLVVDALDLCYTKSHVN 105 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ K+V V SD L D F+ L EI Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKQVIGV----GVKKSTSDLLIANCDEFIFYDDLVREIQ 161 Query: 175 RDPDE 179 R + Sbjct: 162 RTAAK 166 >gi|170725723|ref|YP_001759749.1| hypothetical protein Swoo_1362 [Shewanella woodyi ATCC 51908] gi|169811070|gb|ACA85654.1| protein of unknown function DUF88 [Shewanella woodyi ATCC 51908] Length = 157 Score = 130 bits (327), Expect = 7e-29, Method: Composition-based stats. Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 13/165 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIALF+D N+Y + + A G +YRKL + ++ A Y GD Q Sbjct: 1 MKKIALFVDVQNIYYTCRQAHGRQFNYRKLWQHISHEGEIVSATAYAIHKGDDGQ----- 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 D L + GF V K + + K DV + +D E + ++ +++ SGDG Sbjct: 56 LKFQDALKHIGFDVKLKPFIQRADGSA----KGDWDVGITIDIMEAASEVDSIILLSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F L+ + + K I + V P + + L A + ++ Sbjct: 112 DFDLLMLKIYQ---KYGIETQVYGVPGLTAKSLIDSAAKYHEIDD 153 >gi|325283309|ref|YP_004255850.1| hypothetical protein Deipr_1081 [Deinococcus proteolyticus MRP] gi|324315118|gb|ADY26233.1| Domain of unknown function DUF88 [Deinococcus proteolyticus MRP] Length = 186 Score = 130 bits (327), Expect = 8e-29, Method: Composition-based stats. Identities = 45/178 (25%), Positives = 79/178 (44%), Gaps = 10/178 (5%) Query: 4 PREKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 P+ ++ +FID NLY S++ L +++ LL A ++ A YT + S Sbjct: 6 PKPRVGIFIDTQNLYHSARDLLERTVNFETLLHAGADGRELVHAIAYTVERENE----ST 61 Query: 63 LHPLLDWLHYNGFQVVAKVA-KEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 P + L G++V FT + GR + + D+ + D + L+ +V+ SG Sbjct: 62 ARPFIYKLSTLGYKVRRMNLTLHFTSDSGRPIYEGNWDMGMVADMVRLMDHLDIVVLGSG 121 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 DG FT +V LQ + K+V +++ + +L AD F L L + + Sbjct: 122 DGDFTDIVEVLQERGKRVEVLAF----REHTAQKLIDAADKFTHLPDLSGALMPARRK 175 >gi|148977299|ref|ZP_01813913.1| hypothetical protein VSWAT3_11922 [Vibrionales bacterium SWAT-3] gi|145963412|gb|EDK28676.1| hypothetical protein VSWAT3_11922 [Vibrionales bacterium SWAT-3] Length = 157 Score = 130 bits (327), Expect = 9e-29, Method: Composition-based stats. Identities = 43/166 (25%), Positives = 68/166 (40%), Gaps = 15/166 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 E IA+ +D N+Y +++ + DY + V+ A+ Y DP Sbjct: 1 MENIAILVDVQNVYYTTRDKYRSNFDYNQFWYVATEGRNVVAAHAYAISSQDP-----KQ 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + + K DV +A+DA E +E ++ +V+ SGDG Sbjct: 56 RQFHHILRGVGFDVKLKPFIQRRDGSA----KGDWDVGIALDAIELAENVDTIVLVSGDG 111 Query: 124 CFTTLVAAL-QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F LV + QR KKV + P + + L A F+ + Sbjct: 112 DFEILVERIKQRFGKKVEV----YGVPGLTAQNLIDSASKFVPIEK 153 >gi|307824132|ref|ZP_07654359.1| protein of unknown function DUF88 [Methylobacter tundripaludum SV96] gi|307734916|gb|EFO05766.1| protein of unknown function DUF88 [Methylobacter tundripaludum SV96] Length = 157 Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 38/165 (23%), Positives = 70/165 (42%), Gaps = 13/165 (7%) Query: 5 REKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 EK+A+F+D N+Y ++K +Y + VI A+ Y GD +QQ Sbjct: 1 MEKVAIFVDVQNIYYTTKQSYRRHFNYTAFWSQATADREVIAAFAYAIDKGDCKQQ---- 56 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF+V K + ++ K DV + +DA + + ++ +++ SGDG Sbjct: 57 -GFQQVLRNIGFEVKLKPYIQRSDGSA----KGDWDVGITLDAIDYAAKVDVIILLSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F L+ + + + V P++ + L A F+ + Sbjct: 112 DFDLLLDKARNI---YGVTTEVYGVPALTAPSLINSAGRFIAIDD 153 >gi|84393278|ref|ZP_00992039.1| hypothetical protein V12B01_14530 [Vibrio splendidus 12B01] gi|84376103|gb|EAP92990.1| hypothetical protein V12B01_14530 [Vibrio splendidus 12B01] Length = 157 Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 40/166 (24%), Positives = 66/166 (39%), Gaps = 15/166 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 E IA+ +D N+Y +++ + DY + V+ A Y DP Sbjct: 1 MENIAILVDVQNVYYTTRDKYRSNFDYNQFWYVATEGRNVVAANAYAISSQDP-----KQ 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + + K DV +A+DA E +E ++ +V+ SGDG Sbjct: 56 RQFHHILRGVGFNVKLKPFIQRRDGSA----KGDWDVGIALDAIELAETVDTIVLVSGDG 111 Query: 124 CFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F LV ++ + K V + P + + L A F+ + Sbjct: 112 DFEILVERIKERFGKPVEV----YGVPGLTAQNLIDSASKFVPIEK 153 >gi|71278570|ref|YP_266902.1| hypothetical protein CPS_0134 [Colwellia psychrerythraea 34H] gi|71144310|gb|AAZ24783.1| conserved hypothetical protein [Colwellia psychrerythraea 34H] Length = 157 Score = 130 bits (326), Expect = 1e-28, Method: Composition-based stats. Identities = 37/165 (22%), Positives = 71/165 (43%), Gaps = 13/165 (7%) Query: 5 REKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIA+F+D N+Y +++ +YR L + ++ + A Y D +Q Sbjct: 1 MKKIAVFVDVQNIYYTTRDTYAKQFNYRLLWQELMAQGEITIANAYAIQRSDDQQ----- 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 H L + GF V K + ++ K DV + +D E + ++ +++ SGDG Sbjct: 56 HKFQKALKHIGFDVKLKPYIQRSDGSA----KGDWDVGITIDIMEAAAEVDTVILLSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F L+ ++ K + + V S + + L AD + + Sbjct: 112 DFDLLLRKVRE---KYGVSTEVYSVEKLTAKSLVEAADIHHKIEH 153 >gi|225850534|ref|YP_002730768.1| RtsE [Persephonella marina EX-H1] gi|225645811|gb|ACO03997.1| RtsE [Persephonella marina EX-H1] Length = 179 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 14/177 (7%) Query: 2 FDPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 +++A+F+D NLY S++ + +++ +L + +++RA Y + +Q Sbjct: 10 LYKNQRVAVFLDIQNLYYSARDSFNRKVNFESVLDKVLNGRVLVRAIAYLVKLQGVDQ-- 67 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFT----ENCGRKRVKSSMDVELAVDAFEQSEGLEHL 116 ++ L + G+QV K K F +K+ D+ +A+DA +E ++ Sbjct: 68 ---KGFINTLKHIGYQVRVKEPKIFKRLDEYGNLWTTIKADWDMGIAMDAISLAEKIDVA 124 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 V+ SGDG F LV L K KV I + + A+ +L AD F+DL E+ Sbjct: 125 VLASGDGDFADLVRYLHTKGVKVEIAAFKQT----AAKELIEVADEFIDLTAFGEEV 177 >gi|149911940|ref|ZP_01900538.1| hypothetical protein PE36_11027 [Moritella sp. PE36] gi|149804987|gb|EDM65016.1| hypothetical protein PE36_11027 [Moritella sp. PE36] Length = 157 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 42/163 (25%), Positives = 77/163 (47%), Gaps = 13/163 (7%) Query: 5 REKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIA+F+D N+Y +++ G +YRKL + + V+ AY Y GD +Q Sbjct: 1 MQKIAVFVDVQNIYYTTRQTYGRQFNYRKLWQHLLLQGDVVTAYAYAIDKGDDQQ----- 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 D L + GF V K + ++ K DV + +D + +E ++ +V+ SGDG Sbjct: 56 RKFQDALKHIGFDVKLKPFIQRSDGSA----KGDWDVGITIDVLQVAESVDTVVLLSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 F L+ ++ + + + V P++ ++ L A F + Sbjct: 112 DFAILLDTIKA---RHQVRAEVYGVPALTANALINSATVFNPI 151 >gi|86608534|ref|YP_477296.1| hypothetical protein CYB_1055 [Synechococcus sp. JA-2-3B'a(2-13)] gi|86557076|gb|ABD02033.1| conserved hypothetical protein [Synechococcus sp. JA-2-3B'a(2-13)] Length = 382 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 43/163 (26%), Positives = 72/163 (44%), Gaps = 12/163 (7%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 PR+ + +FID ANL+AS++ G +DY LL + + Y+ V Sbjct: 211 PRKALGVFIDAANLHASAQQWGSHLDYPSLLSWLAQGRSEMEVHVYSGVDR----HNLAQ 266 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L L G++VV K + K+++D EL VD E +++ SGDG Sbjct: 267 RRFLRELRKQGYRVVTKPVVIHADGS----RKANLDGELIVDLMALHSHYETVLLLSGDG 322 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 F + ++R+ ++ + + + L R AD F+DL Sbjct: 323 DFVPALKHIRRQGCRLEVAA----YRPNTNPALIRIADQFVDL 361 >gi|157374400|ref|YP_001473000.1| hypothetical protein Ssed_1261 [Shewanella sediminis HAW-EB3] gi|157316774|gb|ABV35872.1| protein of unknown function DUF88 [Shewanella sediminis HAW-EB3] Length = 159 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 13/164 (7%) Query: 6 EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +KIA+F+D N+Y + + A G +YRKL + + A Y GD Q Sbjct: 4 KKIAIFVDVQNIYYTCRQAYGRQFNYRKLWQHINHEGEISSATAYAIHRGDDGQ-----L 58 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 D L + GF V K + ++ K DV + +D E + ++ +++ SGDG Sbjct: 59 KFQDALKHIGFDVKLKPFIQRSDGSA----KGDWDVGITIDIMEAASEVDSIILLSGDGD 114 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F L+ + + K I + V P++ + L A + ++ Sbjct: 115 FGLLMLKIHQ---KYGIDTQVYGVPTLTAKSLIDSACQYHEIDD 155 >gi|330820543|ref|YP_004349405.1| hypothetical protein bgla_2g14470 [Burkholderia gladioli BSR3] gi|327372538|gb|AEA63893.1| hypothetical protein bgla_2g14470 [Burkholderia gladioli BSR3] Length = 525 Score = 129 bits (325), Expect = 1e-28, Method: Composition-based stats. Identities = 41/187 (21%), Positives = 72/187 (38%), Gaps = 25/187 (13%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M P++ + ALF D N+ + F D + +L+ + ++ Y Sbjct: 1 MALPQDSVNMALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114 + +H F+++ R+ K+S D+ L VDA + ++ Sbjct: 54 -DWDRYKTFKGAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVD 105 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ K+V V + SD L D F+ L E+ Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKRVIGV----GVKNSTSDLLVANCDEFIFYDDLARELQ 161 Query: 175 RDPDEDK 181 R + + Sbjct: 162 RAQAKRE 168 >gi|217970117|ref|YP_002355351.1| hypothetical protein Tmz1t_1700 [Thauera sp. MZ1T] gi|217507444|gb|ACK54455.1| protein of unknown function DUF88 [Thauera sp. MZ1T] Length = 564 Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats. Identities = 39/187 (20%), Positives = 69/187 (36%), Gaps = 25/187 (13%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M + I ALF D N+ + + D +++L+ + ++ Y Sbjct: 1 MASSPDSISMALFCDFENVALGVRDAKYEKFDIKRVLERLLLKGSIVVKKAYC------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114 + +H F+++ R+ K+S D+ L VDA + ++ Sbjct: 54 -DWDRYKSFKAAMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVD 105 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ K+V V SD L D F+ L + Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKQVIGV----GVKQSTSDLLIANCDEFIFYDDLVRDSQ 161 Query: 175 RDPDEDK 181 R + + Sbjct: 162 RAAAKRE 168 >gi|325271797|ref|ZP_08138266.1| hypothetical protein G1E_03075 [Pseudomonas sp. TJI-51] gi|324103068|gb|EGC00446.1| hypothetical protein G1E_03075 [Pseudomonas sp. TJI-51] Length = 159 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 41/165 (24%), Positives = 67/165 (40%), Gaps = 15/165 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIALF D NLY + + A G +Y L ++ A Y GD S Sbjct: 1 MKKIALFADVQNLYYTVRQAHGCHFNYTALWADVCREGQIVEAVAYAIDRGD-----SKQ 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D + + ++ +V+ SGDG Sbjct: 56 QQFQQILRNLGFDVRLKPFIQRSDGSA----KGDWDVGITLDVIDAASRVDQVVLASGDG 111 Query: 124 CFTTLVAA-LQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ +QR + + V P + + L R A ++ + Sbjct: 112 DFDLLLERVIQRHGTE----AVVYGVPGLTALSLIRAASRYVPIE 152 >gi|269967719|ref|ZP_06181767.1| hypothetical protein VMC_31970 [Vibrio alginolyticus 40B] gi|269827625|gb|EEZ81911.1| hypothetical protein VMC_31970 [Vibrio alginolyticus 40B] Length = 162 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 15/168 (8%) Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + ++KIA+ +D N+Y + + A + DY + V+ A Y DP Sbjct: 4 ESKQKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATQGKEVVSARAYAIASNDP----- 58 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 L GF+V+ K + + K DV + +DA E + +E +++ SG Sbjct: 59 KQRQFHHILRGVGFEVMLKPYIQRRDGS----SKGDWDVGITLDAIEIAPEVEEVILVSG 114 Query: 122 DGCFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 DG F+ LV +Q++ K VT+ P + S L AD F+ + Sbjct: 115 DGDFSLLVERIQQRFNKTVTV----YGVPKLTSQTLIDCADNFVAIDD 158 >gi|195953366|ref|YP_002121656.1| protein of unknown function DUF88 [Hydrogenobaculum sp. Y04AAS1] gi|195932978|gb|ACG57678.1| protein of unknown function DUF88 [Hydrogenobaculum sp. Y04AAS1] Length = 195 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 46/184 (25%), Positives = 85/184 (46%), Gaps = 15/184 (8%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE------Q 58 +EK+ +FIDG+N++ K F +DY KL++ ++RAY+Y+ + D + + Sbjct: 3 KEKLVIFIDGSNVFHGLKNETFRLDYLKLIEFLTGDRYLVRAYFYSALPSDKDVDKQSKE 62 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHL 116 F+ L+ L + G +V ++ + ++ +D+ LA D + + Sbjct: 63 GFNKQKKFLEDLAFMGIKVKLAKLRKLPDGN---FLEKEVDIMLATDMLSLAYKNAYDSC 119 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 V+ SGD F+ V A+Q K+V + + +S LRR D F+ L ++ Sbjct: 120 VLVSGDSDFSYTVEAVQFLGKRVENATFKKT----SSYSLRRLCDKFIYLDDHLDKFLLK 175 Query: 177 PDED 180 P E Sbjct: 176 PKEP 179 >gi|153832763|ref|ZP_01985430.1| protein of unknown function [Vibrio harveyi HY01] gi|156976905|ref|YP_001447811.1| hypothetical protein VIBHAR_05689 [Vibrio harveyi ATCC BAA-1116] gi|148870897|gb|EDL69787.1| protein of unknown function [Vibrio harveyi HY01] gi|156528499|gb|ABU73584.1| hypothetical protein VIBHAR_05689 [Vibrio harveyi ATCC BAA-1116] Length = 162 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 15/168 (8%) Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + ++KIA+ +D N+Y + + A + DY + V+ A Y DP Sbjct: 4 ESKQKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATQGKEVVSARAYAIASNDP----- 58 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 L GF+V+ K + + K DV + +DA E + ++ +++ SG Sbjct: 59 KQRQFHHILRGVGFEVMLKPYIQRRDGSA----KGDWDVGITLDAIEIAPEVDEVILVSG 114 Query: 122 DGCFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 DG F+ LV +Q++ KKVT+ P + S L AD F+ + Sbjct: 115 DGDFSLLVERIQQRFNKKVTV----YGVPKLTSQTLIDCADNFVAVDE 158 >gi|91201953|emb|CAJ75013.1| conserved hypothetical protein [Candidatus Kuenenia stuttgartiensis] Length = 177 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 40/167 (23%), Positives = 71/167 (42%), Gaps = 14/167 (8%) Query: 3 DPREKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + ++I +F+D N++ S+KAL IDY KLL ++RA Y D +Q Sbjct: 8 NSPQRIGVFVDVQNMFYSAKALHQSKIDYSKLLLEIVGGRNLVRAIAYIVQKPDVDQSS- 66 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 D L G+++ K + + K D+ +A+D + L+ +V+ +G Sbjct: 67 ----FTDALCRLGYEIKTKDLRLRPDGTA----KGDWDMGIAIDTISIASKLDTVVLVTG 118 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 DG F LV L+ +V VS + +L + + + Sbjct: 119 DGDFVPLVELLKYHGCRVETVSF----RRSTAIELINVSTKYTAIEE 161 >gi|313500724|gb|ADR62090.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1] Length = 159 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 41/165 (24%), Positives = 67/165 (40%), Gaps = 15/165 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIALF D NLY + + A G +Y L ++ A Y GD S Sbjct: 1 MKKIALFADVQNLYYTVRQAHGCHFNYTALWADVSREGQIVEAVAYAIDRGD-----SKQ 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D + + ++ +V+ SGDG Sbjct: 56 QQFQQILRNLGFDVRLKPFIQRSDGSA----KGDWDVGITLDVIDAASRVDQVVLASGDG 111 Query: 124 CFTTLVAA-LQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ +QR + + V P + + L R A ++ + Sbjct: 112 DFDLLLERVIQRHGTE----AVVYGVPGLTALSLIRAATRYVPIE 152 >gi|297566075|ref|YP_003685047.1| hypothetical protein Mesil_1654 [Meiothermus silvanus DSM 9946] gi|296850524|gb|ADH63539.1| protein of unknown function DUF88 [Meiothermus silvanus DSM 9946] Length = 195 Score = 128 bits (323), Expect = 2e-28, Method: Composition-based stats. Identities = 41/173 (23%), Positives = 77/173 (44%), Gaps = 12/173 (6%) Query: 2 FDPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + P +++ LF+D NLY S++ ++++ LLK S ++RA Y + Sbjct: 14 YSPMQRVGLFVDTQNLYHSARDYYEKNVNFESLLKHAVSGRQLVRATAYVVEREGDTSAW 73 Query: 61 SPLHPLLDWLHYNGFQVVAK--VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVI 118 P + L G++V KE T+ G+ + + D+ +A D L+ +V+ Sbjct: 74 ----PFIYKLSTIGYRVRRMNLTLKETTDE-GKPIYEGNWDMGIAADMVRLMHTLDVVVL 128 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 SGDG F ++ L + +V +V+ S +L D F+ L + + Sbjct: 129 GSGDGDFVDIIEVLMERGIRVEVVAF----KETTSQRLIDAVDRFVHLPEIPD 177 >gi|330446321|ref|ZP_08309973.1| putative uncharacterized protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328490512|dbj|GAA04470.1| putative uncharacterized protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 159 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 38/165 (23%), Positives = 66/165 (40%), Gaps = 13/165 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 EK+A+F+D N+Y + + + DY +I AY Y GD Sbjct: 1 MEKVAIFVDVQNIYYTVREKYHANFDYNAFWSEVSQDREIIAAYAYAIHKGD-----EKQ 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 + L GF V K + ++ K DV + +D E + ++ +++ SGDG Sbjct: 56 RQFQNILRAIGFDVKLKPFIQRSDGSA----KGDWDVGITLDVIEHAPEVDRIILLSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F LV +Q K + V P + + L A ++ ++ Sbjct: 112 DFDLLVEKVQT---KYNAIVEVYGVPGLTAASLINSATHYREIED 153 >gi|332139998|ref|YP_004425736.1| hypothetical protein MADE_1002950 [Alteromonas macleodii str. 'Deep ecotype'] gi|327550020|gb|AEA96738.1| hypothetical protein MADE_1002950 [Alteromonas macleodii str. 'Deep ecotype'] Length = 156 Score = 128 bits (322), Expect = 3e-28, Method: Composition-based stats. Identities = 39/164 (23%), Positives = 73/164 (44%), Gaps = 14/164 (8%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +K L +D N+Y + + A + +Y + + + A+ Y GD S Sbjct: 1 MKKALLLVDVQNVYYTCRQAYKRNFNYNRFWRELSYNLDIEHAFAYAIDKGD-----SKQ 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 + L GF+V K + + K DV + VDA E + ++ +++ SGDG Sbjct: 56 REFQNILRAIGFEVKLKPFIQRADGSA----KGDWDVGITVDALEHASQVDEIILVSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F LV AL+ K K VT+ P++ ++ +++ A ++ + Sbjct: 112 DFDILVNALKEKGKTVTV----YGVPALTAESIQKVATRYVPIN 151 >gi|209528287|ref|ZP_03276748.1| protein of unknown function DUF88 [Arthrospira maxima CS-328] gi|284053607|ref|ZP_06383817.1| hypothetical protein AplaP_19301 [Arthrospira platensis str. Paraca] gi|209491273|gb|EDZ91667.1| protein of unknown function DUF88 [Arthrospira maxima CS-328] gi|291565674|dbj|BAI87946.1| hypothetical protein [Arthrospira platensis NIES-39] Length = 173 Score = 128 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 51/179 (28%), Positives = 95/179 (53%), Gaps = 13/179 (7%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA---IVIRAYYYTTVVGDPE 57 M + R ++++F+DG N++ + + G+ D R++L F+ I I A++YT + Sbjct: 1 MPNLRNRLSIFVDGNNMFYAQQKNGWFFDPRRVLDYFKHEQADLIFINAFWYTGLKDP-- 58 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHL 116 D L G+ V K+ KE+ ++ GR K+++D+E+ VD F + + + Sbjct: 59 ---QDQRGFRDALISLGYTVRTKILKEYYDDSSGRYSQKANLDIEIVVDMFNTVDQYDRV 115 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 V+FSGDG F + L+ K +T+VST M + +LR D ++DL ++++I + Sbjct: 116 VLFSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDQIEK 170 >gi|254421306|ref|ZP_05035024.1| conserved hypothetical protein [Synechococcus sp. PCC 7335] gi|196188795|gb|EDX83759.1| conserved hypothetical protein [Synechococcus sp. PCC 7335] Length = 328 Score = 128 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 56/173 (32%), Positives = 89/173 (51%), Gaps = 12/173 (6%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 + I +FIDG+NL+ ++ L ++DYR+LL + ++RAY+YT V E+Q Sbjct: 168 QSNDLITIFIDGSNLFYAASHLNIEVDYRRLLTSLVRGRRLLRAYFYTGVDPQNEKQ--- 224 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 L WL+ +G +VV+K + K++M VE+AVD SE ++ + GD Sbjct: 225 -RGFLLWLNRHGHRVVSKELTNLPDGS----RKANMHVEMAVDMMRISEYCSNITLLGGD 279 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 G + L ++ + +VS SM SD L AD + DLA L++ I R Sbjct: 280 GNLAYALQVLSQRGTFIEVVS----LQSMTSDSLIDIADSYTDLADLRDRIKR 328 >gi|56477068|ref|YP_158657.1| hypothetical protein ebA2897 [Aromatoleum aromaticum EbN1] gi|56313111|emb|CAI07756.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1] Length = 510 Score = 128 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 41/186 (22%), Positives = 68/186 (36%), Gaps = 25/186 (13%) Query: 1 MFDPRE--KIALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M P E +ALF D N+ + + D +++L+ + ++ Y Sbjct: 1 MASPHETASMALFCDFENVALGVRDANYEKFDIKRVLERLLLKGSIVVKKAYC------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114 + +H F+++ R+ K+S D+ L VDA + + Sbjct: 54 -DWDRYKGFKATMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVN 105 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ K+V V SD L D F+ L E Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKQVIGV----GVKQSTSDLLIANCDEFIFYDDLVRESQ 161 Query: 175 RDPDED 180 R + Sbjct: 162 RAAAKR 167 >gi|108805593|ref|YP_645530.1| hypothetical protein Rxyl_2805 [Rubrobacter xylanophilus DSM 9941] gi|108766836|gb|ABG05718.1| protein of unknown function DUF88 [Rubrobacter xylanophilus DSM 9941] Length = 189 Score = 128 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 48/186 (25%), Positives = 84/186 (45%), Gaps = 13/186 (6%) Query: 1 MFD-PREKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58 M + E++A+F+DGANLY S K+ G +DY +LL+A + ++RA +Y + ++ Sbjct: 1 MENRSDERVAVFVDGANLYHSIKSYYGGVLDYGRLLEAAVAGRRLLRATFYLVEKQEADE 60 Query: 59 Q-FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRV----KSSMDVELAVDAFEQSEGL 113 Q S + L+ G++V +K K DV + VD ++ Sbjct: 61 QVASSTRSFVYNLNRFGYKVRSKPLTVHETTTPGVERVVSHKGDWDVGIVVDMIRLADHA 120 Query: 114 EHLVIFSGDGCFTTLVAALQ-RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 + V+ SGDG + +V LQ + +V ++S + L D + DL + + Sbjct: 121 DTYVLVSGDGDYVEVVDYLQTERGLRVEVISAAQ----CTAQALFDVCDRYTDLGEIPDL 176 Query: 173 I-ARDP 177 R P Sbjct: 177 FRERGP 182 >gi|194333277|ref|YP_002015137.1| hypothetical protein Paes_0433 [Prosthecochloris aestuarii DSM 271] gi|194311095|gb|ACF45490.1| protein of unknown function DUF88 [Prosthecochloris aestuarii DSM 271] Length = 294 Score = 128 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 16/180 (8%) Query: 1 MFDP-REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 M D K +FIDGANL+ + + +G+ ID+ +L+ F + A YY + Sbjct: 1 MPDKGNRKAGVFIDGANLFFTQRHMGWQIDFSRLIAFFMQCFDSVEARYYV---PESGAL 57 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTE-NCGRKRVKSSMDVELAVDAFEQSEGLEHLVI 118 L NG+ + +K K+ G +K ++DVEL VDA + + ++ Sbjct: 58 SQEQVAFNRMLEANGYTITSKPVKKIVNKETGEVVMKGNLDVELVVDALTTASRYDSFIL 117 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQ----ADYFMDLAYLKNEIA 174 SGD F L+ AL+ + K + + ST +++ +L + F + ++++I Sbjct: 118 VSGDSDFLPLIRALRSRGKDIQVYST----RGLSAWELVAEPGIGCHDF---SDIRSKIE 170 >gi|46199000|ref|YP_004667.1| hypothetical protein TTC0692 [Thermus thermophilus HB27] gi|46196624|gb|AAS81040.1| hypothetical conserved protein [Thermus thermophilus HB27] Length = 180 Score = 128 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 73/182 (40%), Gaps = 11/182 (6%) Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 +++ +F+D NLY S++ ++++ LL+ ++RA Y + Sbjct: 8 YQEQRVGVFVDTQNLYHSARDYYERNVNFESLLRFAVGGRRLVRATAYVVEKEGDTSAW- 66 Query: 62 PLHPLLDWLHYNGFQVVAKVA-KEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 P + L G++V + T GR + D+ +A D L+ +V+ S Sbjct: 67 ---PFIYKLSTIGYKVRRMYLTVKETGEGGRPIYSGNWDMGIAADMVRLMPYLDVVVLGS 123 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F ++ L + +V +++ + +L D F L + +P Sbjct: 124 GDGDFVEILEVLMERGIRVEVIAF----RETTAQRLIDAVDRFTHLPEIPGAFM-EPRSP 178 Query: 181 KK 182 ++ Sbjct: 179 ER 180 >gi|319959046|gb|ADV90687.1| LabA [Nostoc linckia EC102] gi|319959048|gb|ADV90688.1| LabA [Nostoc linckia EC105] gi|319959050|gb|ADV90689.1| LabA [Nostoc linckia EC106] gi|319959052|gb|ADV90690.1| LabA [Nostoc linckia EC109] gi|319959054|gb|ADV90691.1| LabA [Nostoc linckia EC113] gi|319959056|gb|ADV90692.1| LabA [Nostoc linckia EC119] gi|319959058|gb|ADV90693.1| LabA [Nostoc linckia EC121] gi|319959060|gb|ADV90694.1| LabA [Nostoc linckia EC205] gi|319959062|gb|ADV90695.1| LabA [Nostoc linckia EC206] gi|319959064|gb|ADV90696.1| LabA [Nostoc linckia EC220] gi|319959066|gb|ADV90697.1| LabA [Nostoc linckia EC221] gi|319959068|gb|ADV90698.1| LabA [Nostoc linckia EC222] gi|319959070|gb|ADV90699.1| LabA [Nostoc linckia EC326] gi|319959072|gb|ADV90700.1| LabA [Nostoc linckia NK217] gi|319959074|gb|ADV90701.1| LabA [Nostoc linckia EC501] gi|319959076|gb|ADV90702.1| LabA [Nostoc linckia EC505] gi|319959078|gb|ADV90703.1| LabA [Nostoc linckia EC519] gi|319959080|gb|ADV90704.1| LabA [Nostoc linckia EC521] gi|319959082|gb|ADV90705.1| LabA [Nostoc linckia EC602] gi|319959084|gb|ADV90706.1| LabA [Nostoc linckia EC724] gi|319959086|gb|ADV90707.1| LabA [Nostoc linckia EC204] gi|319959090|gb|ADV90709.1| LabA [Nostoc linckia EC210] gi|319959092|gb|ADV90710.1| LabA [Nostoc linckia EC322] gi|319959096|gb|ADV90712.1| LabA [Nostoc linckia NK207] gi|319959098|gb|ADV90713.1| LabA [Nostoc linckia EC703] gi|319959100|gb|ADV90714.1| LabA [Nostoc linckia EC720] Length = 173 Score = 128 bits (321), Expect = 4e-28, Method: Composition-based stats. Identities = 49/157 (31%), Positives = 81/157 (51%), Gaps = 12/157 (7%) Query: 23 ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVA 82 LG +IDY KLL + ++RA++YT V E+Q L W+ NG++V+AK Sbjct: 2 QLGIEIDYTKLLCRLTGGSRLLRAFFYTGVDRTNEKQ----QGFLLWMRRNGYRVIAKDL 57 Query: 83 KEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIV 142 + + K+++DVE+AVD + + V+ SGDG V ++ + +V +V Sbjct: 58 VQLPDGS----KKANLDVEIAVDMMALVDSYDTAVLVSGDGDLAYAVNSVSYRGVRVEVV 113 Query: 143 STVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 S SM SD L +D ++DL +K +I + P + Sbjct: 114 S----LRSMTSDSLINVSDRYIDLEAIKEDIQKTPRQ 146 >gi|257051312|ref|YP_003129145.1| protein of unknown function DUF88 [Halorhabdus utahensis DSM 12940] gi|256690075|gb|ACV10412.1| protein of unknown function DUF88 [Halorhabdus utahensis DSM 12940] Length = 165 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 42/172 (24%), Positives = 79/172 (45%), Gaps = 14/172 (8%) Query: 3 DPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 P +++A+ D NLY ++++ +IDY +LL A + RA Y +++ Sbjct: 5 HPGQRVAVLADSQNLYHTAQSLYQQNIDYGELLDAAVRDRQLTRAIAYVIRADADDEER- 63 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 D L GF+ AK K F + K+ DV +++DA + ++ + + +G Sbjct: 64 ----FFDALEDIGFETKAKDIKTFADGS----KKADWDVGMSLDAVTLAPHVDTIALCTG 115 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 DG F LV ++ + +V ++S S S++L A+ + DL+ Sbjct: 116 DGDFARLVTHVRHEGVRVEVLSFGES----TSEELLDVAEDYTDLSEDTERF 163 >gi|254507966|ref|ZP_05120094.1| conserved hypothetical protein [Vibrio parahaemolyticus 16] gi|219549074|gb|EED26071.1| conserved hypothetical protein [Vibrio parahaemolyticus 16] Length = 161 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 40/166 (24%), Positives = 68/166 (40%), Gaps = 15/166 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 EKIA+F+D N+Y +++ + DY + V+ A Y DP Sbjct: 1 MEKIAIFVDVQNIYYTTRDKYRANFDYNEFWYLATEGKEVVEAKAYAIASTDP-----KQ 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + + K DV +A+D +E + ++ +++ SGDG Sbjct: 56 RQFHHILRGIGFDVKLKPYIQRADGS----TKGDWDVGIALDVYEAANKVDRVILLSGDG 111 Query: 124 CFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F LV +Q++ KV + S P + + L D + + Sbjct: 112 DFEILVERIQQRFGTKVDV----YSVPGLTAQALIDVCDKHIPIEE 153 >gi|167035773|ref|YP_001671004.1| hypothetical protein PputGB1_4782 [Pseudomonas putida GB-1] gi|166862261|gb|ABZ00669.1| protein of unknown function DUF88 [Pseudomonas putida GB-1] Length = 159 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 40/165 (24%), Positives = 67/165 (40%), Gaps = 15/165 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIALF D NLY + + A G +Y L ++ A Y GD + Sbjct: 1 MKKIALFADVQNLYYTVRQAHGCHFNYTALWADVSREGQIVEAVAYAIDRGD-----AKQ 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV + +D + + ++ +V+ SGDG Sbjct: 56 QQFQQILRNLGFDVRLKPFIQRSDGSA----KGDWDVGITLDVIDAASRVDQVVLASGDG 111 Query: 124 CFTTLVAA-LQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ +QR + + V P + + L R A ++ + Sbjct: 112 DFDLLLERVIQRHGTE----AVVYGVPGLTALSLIRAATRYVPIE 152 >gi|218295524|ref|ZP_03496337.1| protein of unknown function DUF88 [Thermus aquaticus Y51MC23] gi|218244156|gb|EED10682.1| protein of unknown function DUF88 [Thermus aquaticus Y51MC23] Length = 179 Score = 127 bits (320), Expect = 5e-28, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 75/181 (41%), Gaps = 10/181 (5%) Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 +++ +F+D NLY S++ ++++ LL+ ++RA Y + Sbjct: 7 HQDQRVGVFVDTQNLYHSARDYYERNVNFESLLRFAVGGRRLVRATAYVVEKEGDTSAW- 65 Query: 62 PLHPLLDWLHYNGFQVVAKVA-KEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 P + L G++V + T GR + + D+ +A D L+ +V+ S Sbjct: 66 ---PFIYKLSTIGYRVRRMYLTVKETGEGGRPIYEGNWDMGIAADMVRLMPYLDVVVLGS 122 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F ++ L + +V +++ + +L D F+ L + N + + Sbjct: 123 GDGDFVEILEVLMERGIRVEVIAF----RETTAQRLIDAVDRFVHLPEIPNPFMEPKNPE 178 Query: 181 K 181 + Sbjct: 179 R 179 >gi|90414813|ref|ZP_01222781.1| hypothetical protein P3TCK_17379 [Photobacterium profundum 3TCK] gi|90324118|gb|EAS40703.1| hypothetical protein P3TCK_17379 [Photobacterium profundum 3TCK] Length = 159 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 41/166 (24%), Positives = 69/166 (41%), Gaps = 15/166 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 EK+A+F+D N+Y + K + DY V+ AY Y GD +Q Sbjct: 1 MEKVAIFVDVQNIYYTVKDKYKCNFDYNAFWAEATQGREVVAAYAYAIHRGDEKQGQ--- 57 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 + L GF+V K + ++ K DV + +D E + ++ +++ SGDG Sbjct: 58 --FQNILRGIGFEVKLKPFIQRSDGSA----KGDWDVGITLDVIEHAGDVDRVILLSGDG 111 Query: 124 CFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F LV +Q K V + P + + L A Y+ ++ Sbjct: 112 DFDLLVDKVQTKYGVDVEV----YGVPGLTATSLINTAHYYREIES 153 >gi|332711770|ref|ZP_08431701.1| hypothetical protein LYNGBM3L_65720 [Lyngbya majuscula 3L] gi|332349748|gb|EGJ29357.1| hypothetical protein LYNGBM3L_65720 [Lyngbya majuscula 3L] Length = 165 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 48/169 (28%), Positives = 90/169 (53%), Gaps = 12/169 (7%) Query: 10 LFIDGANLYASSKALGFDIDYRKLLKAFRS--RAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +F+DG N++ + + G+ D R++L F++ ++ A++YT + Sbjct: 3 IFVDGNNMFYAQQKNGWFFDPRRVLDYFKNEPGITLVNAFWYTGLKDP-----QDQRGFR 57 Query: 68 DWLHYNGFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126 D L G+ V K+ KE+ +N GR K+++D+E+ VD F E + +++FSGDG F Sbjct: 58 DALISLGYTVRTKILKEYYDDNSGRYSQKANLDIEIVVDMFNTVEQYDKVILFSGDGDFE 117 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 + L+ K +T+VST M + +LR D ++DL ++++I + Sbjct: 118 RAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDVRDQIEK 162 >gi|55981026|ref|YP_144323.1| hypothetical protein TTHA1057 [Thermus thermophilus HB8] gi|55772439|dbj|BAD70880.1| conserved hypothetical protein [Thermus thermophilus HB8] Length = 180 Score = 127 bits (320), Expect = 6e-28, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 72/181 (39%), Gaps = 10/181 (5%) Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 +++ +F+D NLY S++ ++++ LL+ ++RA Y + Sbjct: 8 YQEQRVGVFVDTQNLYHSARDYYERNVNFESLLRFAVGGRRLVRATAYVVEKEGDTSAW- 66 Query: 62 PLHPLLDWLHYNGFQVVAKVA-KEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 P + L G++V + T GR + D+ +A D L+ +V+ S Sbjct: 67 ---PFIYKLSTIGYKVRRMYLTVKETGEGGRPIYSGNWDMGIAADMVRLMPYLDVVVLGS 123 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F ++ L + +V +++ + +L D F L + + + Sbjct: 124 GDGDFVEILEVLMERGIRVEVIAF----RETTAQRLIDAVDRFTHLPEIPGAFMEPKNAE 179 Query: 181 K 181 + Sbjct: 180 R 180 >gi|171317829|ref|ZP_02907008.1| protein of unknown function DUF88 [Burkholderia ambifaria MEX-5] gi|171096994|gb|EDT41862.1| protein of unknown function DUF88 [Burkholderia ambifaria MEX-5] Length = 643 Score = 127 bits (319), Expect = 6e-28, Method: Composition-based stats. Identities = 40/188 (21%), Positives = 70/188 (37%), Gaps = 25/188 (13%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M P + + A+F D N+ + + D + +L+ + ++ Y Sbjct: 1 MALPLDNVSMAVFCDFENVALGVRDAKYEKFDIQPVLERLLLKGSIVVKKAYC------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114 + +H F+++ R+ K+S D+ L VDA + ++ Sbjct: 54 -DWERYKGFKASMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVD 105 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ KKV V SD L D F+ L E Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKKVIGV----GVKKSTSDLLVANCDEFIFYDDLVREQQ 161 Query: 175 RDPDEDKK 182 R + ++ Sbjct: 162 RAQAKREQ 169 >gi|323492730|ref|ZP_08097874.1| hypothetical protein VIBR0546_00630 [Vibrio brasiliensis LMG 20546] gi|323313105|gb|EGA66225.1| hypothetical protein VIBR0546_00630 [Vibrio brasiliensis LMG 20546] Length = 160 Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats. Identities = 41/166 (24%), Positives = 68/166 (40%), Gaps = 15/166 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 EK+A+F+D N+Y +++ + DY + V+ A Y DP Sbjct: 1 MEKVAIFVDVQNIYYTTRDKYRANFDYNQFWYIATEGREVVSANAYAIASHDP-----KQ 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + + K DV LA+D FE + ++ +++ SGDG Sbjct: 56 RQFHHILRGIGFNVQLKPFIQRNDGSA----KGDWDVGLALDVFETASQVDRVILLSGDG 111 Query: 124 CFTTLVAALQ-RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F LV +Q R KV + P + + L A+ ++ + Sbjct: 112 DFDVLVDRIQSRFGTKVDVF----GVPGLTAQSLIDVANNYIPIDE 153 >gi|269962746|ref|ZP_06177088.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269832501|gb|EEZ86618.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 163 Score = 127 bits (319), Expect = 7e-28, Method: Composition-based stats. Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 15/167 (8%) Query: 4 PREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 ++KIA+ +D N+Y + + A + DY + V+ A Y DP Sbjct: 6 NKQKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATQGKEVVSARAYAIASNDP-----K 60 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 L GF+V+ K + + K DV + +DA E + ++ +++ SGD Sbjct: 61 QRQFHHILRGVGFEVMLKPYIQRRDGSA----KGDWDVGITLDAIEIAPEVDEVILVSGD 116 Query: 123 GCFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 G F+ LV +Q++ KKVT+ P + S L AD+F+ + Sbjct: 117 GDFSLLVERIQQRFNKKVTV----YGVPRLTSQTLIDCADHFVAVDD 159 >gi|254428823|ref|ZP_05042530.1| conserved hypothetical protein [Alcanivorax sp. DG881] gi|196194992|gb|EDX89951.1| conserved hypothetical protein [Alcanivorax sp. DG881] Length = 157 Score = 127 bits (319), Expect = 8e-28, Method: Composition-based stats. Identities = 40/165 (24%), Positives = 70/165 (42%), Gaps = 15/165 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 + + + +D N+Y +++ A DY + + V++A Y GD Sbjct: 1 MKTVLILVDVQNVYYTTRQAFNRRFDYNQFWSTVTAEGQVVKAIAYAIDRGD-----KKQ 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 + L GF+V K + ++ K DV +A+DA E + ++ +V+ SGDG Sbjct: 56 REFQNILRAIGFEVKLKPFIQRSDGSA----KGDWDVGIAIDALEYAAEVDSVVLVSGDG 111 Query: 124 CFTTLVAALQ-RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F LV L+ K K V + + +D L R A F+ + Sbjct: 112 DFDLLVDKLRVDKGKHVDV----YGVAPLTADSLARAASRFVPIE 152 >gi|115351126|ref|YP_772965.1| hypothetical protein Bamb_1072 [Burkholderia ambifaria AMMD] gi|115281114|gb|ABI86631.1| protein of unknown function DUF88 [Burkholderia ambifaria AMMD] Length = 507 Score = 127 bits (318), Expect = 8e-28, Method: Composition-based stats. Identities = 40/188 (21%), Positives = 70/188 (37%), Gaps = 25/188 (13%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M P + + A+F D N+ + + D + +L+ + ++ Y Sbjct: 1 MALPLDNVSMAVFCDFENVALGVRDAKYEKFDIQPVLERLLLKGSIVVKKAYC------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114 + +H F+++ R+ K+S D+ L VDA + ++ Sbjct: 54 -DWERYKGFKASMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVD 105 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ KKV V SD L D F+ L E Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKKVIGV----GVKKSTSDLLVANCDEFIFYDDLVREQQ 161 Query: 175 RDPDEDKK 182 R + ++ Sbjct: 162 RAQAKREQ 169 >gi|88796999|ref|ZP_01112589.1| hypothetical protein MED297_19237 [Reinekea sp. MED297] gi|88779868|gb|EAR11053.1| hypothetical protein MED297_19237 [Reinekea sp. MED297] Length = 159 Score = 127 bits (318), Expect = 8e-28, Method: Composition-based stats. Identities = 37/163 (22%), Positives = 69/163 (42%), Gaps = 15/163 (9%) Query: 8 IALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 +A+ +D N+Y +++ A + DY + + ++ A Y GD Sbjct: 4 VAILVDVQNVYYTTRHAFRRNFDYNRFWAQVSEQGTIVLANAYAVDRGD-----EKQKQF 58 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126 + L GF V K + + K DV + +DA + ++ + +V+ +GDG FT Sbjct: 59 QNILRAIGFNVKLKPFIQRADGSA----KGDWDVGITIDALDAAQLADTVVLVTGDGDFT 114 Query: 127 TLVAALQ-RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 LV L+ ++V + PS+ + L AD F+ + Sbjct: 115 ILVDKLRNDLDRRVEV----YGVPSLTAKSLMDAADAFIPIDD 153 >gi|89092681|ref|ZP_01165634.1| hypothetical protein MED92_15283 [Oceanospirillum sp. MED92] gi|89083193|gb|EAR62412.1| hypothetical protein MED92_15283 [Oceanospirillum sp. MED92] Length = 160 Score = 127 bits (318), Expect = 8e-28, Method: Composition-based stats. Identities = 40/163 (24%), Positives = 74/163 (45%), Gaps = 13/163 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 KIA+F+D N+Y +++ A G +YRK +A ++ ++ A Y D Q Sbjct: 1 MTKIAIFVDVQNIYYTTRQAFGGSFNYRKFWQAISTQGEIVEANAYAIERADDGQ----- 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 D L + GF V K + + K DV + +D EQ+ ++ +++ SGDG Sbjct: 56 KKFQDALRHIGFNVKLKPFIQRKDGTA----KGDWDVGITIDVLEQAAHVDKVILLSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 F L+ ++ K + + V S ++ + L D++ + Sbjct: 112 DFDLLLKKIRSTYK---VTTEVYSIEALTAKSLISATDHYHSI 151 >gi|91224643|ref|ZP_01259904.1| hypothetical protein V12G01_07878 [Vibrio alginolyticus 12G01] gi|91190531|gb|EAS76799.1| hypothetical protein V12G01_07878 [Vibrio alginolyticus 12G01] Length = 162 Score = 127 bits (318), Expect = 9e-28, Method: Composition-based stats. Identities = 42/167 (25%), Positives = 71/167 (42%), Gaps = 13/167 (7%) Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + ++KIA+ +D N+Y + + A + DY + V+ A Y DP Sbjct: 4 ESKQKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATQGKEVVSARAYAIASNDP----- 58 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 L GF+V+ K + + K DV + +DA E + +E +++ SG Sbjct: 59 KQRQFHHILRGVGFEVMLKPYIQRRDGS----SKGDWDVGITLDAIEIAPEVEEVILVSG 114 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 DG F+ LV +Q++ TV P + S L AD F+ + Sbjct: 115 DGDFSLLVERIQQRFNNTV---TVYGVPKLTSQTLIDCADNFVAIDD 158 >gi|90408478|ref|ZP_01216637.1| hypothetical protein PCNPT3_03246 [Psychromonas sp. CNPT3] gi|90310410|gb|EAS38536.1| hypothetical protein PCNPT3_03246 [Psychromonas sp. CNPT3] Length = 157 Score = 127 bits (318), Expect = 9e-28, Method: Composition-based stats. Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 13/163 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIA+F D N+Y +S+ A +YRKL + + + + A+ Y GD +QQ Sbjct: 1 MKKIAIFADVQNIYYTSRDAYKKSFNYRKLWQQIKEQGDICYAFAYAIDKGDRQQQK--- 57 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 D L + GF++ K + + K DV + +D + + ++ +++ SGDG Sbjct: 58 --FQDVLRHLGFEIKLKPYIQRCDGSA----KGDWDVGITIDIMQIAPRVDCIILLSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 F L+ + ++ K + + V P + L F + Sbjct: 112 DFAILLETVNKRDK---VETQVYGVPKYTAKALIDSCSVFNPI 151 >gi|291295060|ref|YP_003506458.1| hypothetical protein Mrub_0671 [Meiothermus ruber DSM 1279] gi|290470019|gb|ADD27438.1| protein of unknown function DUF88 [Meiothermus ruber DSM 1279] Length = 192 Score = 127 bits (318), Expect = 9e-28, Method: Composition-based stats. Identities = 42/182 (23%), Positives = 84/182 (46%), Gaps = 14/182 (7%) Query: 4 PREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 P++++ LF+D NLY S++ G ++++ L++ + ++RA Y + Sbjct: 13 PQQRVGLFVDTQNLYHSARDYYGQNVNFESLMRYAVANRQLVRATAYVVEREHDTSAW-- 70 Query: 63 LHPLLDWLHYNGFQVVAK--VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 P + L GF+V KE T+ G+ + + D+ +A D L+ +V+ S Sbjct: 71 --PFIYKLSTIGFRVRRMNLTLKETTDE-GKPIYEGNWDMGIAADMVRLMHTLDVVVLGS 127 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F +V L + +V +++ S +L D F+ L ++N P ++ Sbjct: 128 GDGDFVDIVEVLMERGIRVEVIAF----KETTSQKLIDAVDRFIHLPEIENAF--VPSKE 181 Query: 181 KK 182 ++ Sbjct: 182 RE 183 >gi|323497755|ref|ZP_08102770.1| hypothetical protein VISI1226_04395 [Vibrio sinaloensis DSM 21326] gi|323317231|gb|EGA70227.1| hypothetical protein VISI1226_04395 [Vibrio sinaloensis DSM 21326] Length = 160 Score = 127 bits (318), Expect = 9e-28, Method: Composition-based stats. Identities = 40/166 (24%), Positives = 70/166 (42%), Gaps = 15/166 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 EKIA+F+D N+Y +++ + DY + V+ A Y DP Sbjct: 1 MEKIAIFVDVQNIYYTTRDKYRANFDYNQFWYVATEGQQVVSASAYAIASTDP-----KQ 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + ++ K DV +A+D +E + ++ +++ SGDG Sbjct: 56 RQFHHILRGIGFDVKLKPYIQRSDGS----TKGDWDVGIALDVYELASQVDRVILLSGDG 111 Query: 124 CFTTLVAALQRKVK-KVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F LV +Q++ KV + + P + + L D F+ + Sbjct: 112 DFEMLVTRIQQRFATKVDV----YAVPGLTAQNLIDVCDKFIPIDE 153 >gi|220934364|ref|YP_002513263.1| protein of unknown function DUF88 [Thioalkalivibrio sp. HL-EbGR7] gi|219995674|gb|ACL72276.1| protein of unknown function DUF88 [Thioalkalivibrio sp. HL-EbGR7] Length = 275 Score = 127 bits (318), Expect = 9e-28, Method: Composition-based stats. Identities = 42/188 (22%), Positives = 69/188 (36%), Gaps = 25/188 (13%) Query: 1 MFDPRE--KIALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M P E +ALF D N+ + + D K+L+ + ++ Y Sbjct: 1 MPSPAEIRNMALFCDFENIALGVREAKYPKFDIGKVLERLLLKGNIVVRKAYC------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114 + +H F+++ R+ K+S D+ + VDA + ++ Sbjct: 54 -DWDRYKEFKAPMHEAAFELIEIPHV-------RQSGKNSADIRMVVDALDLCYTKGHVD 105 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 V+ SGD F+ LVA L+ K V V SD L D F+ L E A Sbjct: 106 AFVVISGDSDFSPLVAKLRENNKLVIGV----GVKKSTSDLLTAACDEFIYYDDLVREAA 161 Query: 175 RDPDEDKK 182 + +K Sbjct: 162 HKKRKPRK 169 >gi|262395374|ref|YP_003287227.1| hypothetical protein VEA_000074 [Vibrio sp. Ex25] gi|262338968|gb|ACY52762.1| hypothetical protein VEA_000074 [Vibrio sp. Ex25] Length = 162 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 15/168 (8%) Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + ++KIA+ +D N+Y + + A + DY + V+ A Y DP Sbjct: 4 ERKQKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATQGKEVVSARAYAIASNDP----- 58 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 L GF+V+ K + + K DV + +DA E + +E +++ SG Sbjct: 59 KQRQFHHILRGVGFEVMLKPYIQRRDGS----SKGDWDVGITLDAIEIAPEVEEVILVSG 114 Query: 122 DGCFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 DG F+ LV +Q++ K VT+ P + S L AD F+ + Sbjct: 115 DGDFSLLVERIQQRFNKTVTV----YGVPKLTSQTLIDCADNFVAIDD 158 >gi|54308491|ref|YP_129511.1| hypothetical protein PBPRA1298 [Photobacterium profundum SS9] gi|46912920|emb|CAG19709.1| conserved hypothetical protein [Photobacterium profundum SS9] Length = 159 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 41/166 (24%), Positives = 69/166 (41%), Gaps = 15/166 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 EK+A+F+D N+Y + K + DY V+ AY Y GD +Q Sbjct: 1 MEKVAIFVDVQNIYYTVKDKYKCNFDYNAFWAEATQGREVVAAYAYAIHRGDEKQGQ--- 57 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 + L GF+V K + ++ K DV + +D E + ++ +++ SGDG Sbjct: 58 --FQNILRGIGFEVKLKPFIQRSDGSA----KGDWDVGITLDVIEHAADVDRVILLSGDG 111 Query: 124 CFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F LV +Q K V + P + + L A Y+ ++ Sbjct: 112 DFDLLVDKVQTKYGVDVEV----YGVPGLTATSLINTAHYYREIES 153 >gi|298246249|ref|ZP_06970055.1| protein of unknown function DUF88 [Ktedonobacter racemifer DSM 44963] gi|297553730|gb|EFH87595.1| protein of unknown function DUF88 [Ktedonobacter racemifer DSM 44963] Length = 933 Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats. Identities = 40/172 (23%), Positives = 75/172 (43%), Gaps = 14/172 (8%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 F E++ +F+D ANL S++ L +D+ KLL R ++RA Y Q Sbjct: 771 FPSTERVGVFVDVANLLYSARTLRMSVDFGKLLDFLRGNRRLVRAQAYC----PTSPQAG 826 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIF 119 L + G+++ K K F+ K+ +D++L +D ++ +V+ Sbjct: 827 DEQMFLQAVKGLGYRITTKNYKTFSSGA----KKADLDLDLCMDVVRLVEGRAVDCIVLV 882 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 SGD F ++ +V + + + S LR+ D F++L+ L+ Sbjct: 883 SGDSDFMPMLDYCSDHGVRVEVAAFDEAM----SATLRQSCDLFVNLSLLEE 930 >gi|328950408|ref|YP_004367743.1| Domain of unknown function DUF88 [Marinithermus hydrothermalis DSM 14884] gi|328450732|gb|AEB11633.1| Domain of unknown function DUF88 [Marinithermus hydrothermalis DSM 14884] Length = 186 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 35/171 (20%), Positives = 72/171 (42%), Gaps = 10/171 (5%) Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 P +++ +F+D NLY S++ +++ LL + ++RA Y + Sbjct: 8 HPTQRVGVFVDTQNLYHSARDYYERTVNFASLLNYAVAGRQLVRATAYVVERDGDTSAW- 66 Query: 62 PLHPLLDWLHYNGFQVVAKVAK-EFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 P + L G++V + T + G+ + + D+ +A D L+ +V+ S Sbjct: 67 ---PFIYKLSTIGYRVRRMTLQLHHTTDDGKPIYEGNWDMGIAADMVRLMHTLDVVVLGS 123 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 GDG F ++ L + +V +V+ + +L D F L + + Sbjct: 124 GDGDFVEILEVLMERGIRVEVVAF----KETTAQKLIDAVDKFTHLPDIPD 170 >gi|134282577|ref|ZP_01769281.1| conserved hypothetical protein [Burkholderia pseudomallei 305] gi|134246134|gb|EBA46224.1| conserved hypothetical protein [Burkholderia pseudomallei 305] Length = 622 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 69/182 (37%), Gaps = 25/182 (13%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M P++ + ALF D N+ + F D + +L+ + ++ Y Sbjct: 144 MALPQDSVNMALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC------- 196 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLE 114 + +H F+++ R+ K+S D+ L VDA + ++ Sbjct: 197 -DWDRYKTFKAAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVD 248 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ K+V V + SD L D F+ L E Sbjct: 249 TFVIISGDSDFSPLVSKLRENAKRVIGV----GVKNSTSDLLVANCDEFIFYDDLAREQQ 304 Query: 175 RD 176 R Sbjct: 305 RA 306 >gi|209694823|ref|YP_002262751.1| hypothetical protein VSAL_I1288 [Aliivibrio salmonicida LFI1238] gi|208008774|emb|CAQ78973.1| conserved hypothetical protein [Aliivibrio salmonicida LFI1238] Length = 157 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 41/165 (24%), Positives = 66/165 (40%), Gaps = 15/165 (9%) Query: 5 REKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 + +A+ +D N+Y +++ DY L V+ A Y D Sbjct: 1 MKTVAILVDVQNIYYTTRDVYQRHFDYNALWAKVTDGRKVVGANAYAIARSDD-----KQ 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 + L GF V K + + K DV +A+DA E +E + +VI SGDG Sbjct: 56 KQFHNILRGIGFDVKLKPFIQRRDGSA----KGDWDVGIALDAIELAEQADIVVILSGDG 111 Query: 124 CFTTLVAALQ-RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F LV +Q R K+V + + ++ L AD F+ + Sbjct: 112 DFELLVQRIQSRFNKEVEV----YGVADLTANALIDAADRFIPIE 152 >gi|289548415|ref|YP_003473403.1| hypothetical protein Thal_0643 [Thermocrinis albus DSM 14484] gi|289182032|gb|ADC89276.1| protein of unknown function DUF88 [Thermocrinis albus DSM 14484] Length = 196 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 17/179 (9%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS--- 61 E++ +FIDG+NL+ + + L IDY KL++ R ++RAY+Y V + + + + Sbjct: 1 MERVVIFIDGSNLFHAIRYLNIKIDYSKLVEFLREDRKLVRAYFYGAVPQERDVKRNTPE 60 Query: 62 -----PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LE 114 L+ L G +V ++ + ++ +D+ LA D + + Sbjct: 61 WESLLRQRRFLEELSLMGIKVKTAPLRKLPTG---EYLEKEVDIMLATDMLSMAYMNVYD 117 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 ++ SGD F+ V +QR K+V S + +S LR+ D F+ L + Sbjct: 118 TAILVSGDSDFSYTVEEVQRIGKRVENASFRKT----SSYLLRKICDRFILLDDYVDRF 172 >gi|163803423|ref|ZP_02197297.1| hypothetical protein 1103602000421_AND4_08566 [Vibrio sp. AND4] gi|159172772|gb|EDP57618.1| hypothetical protein AND4_08566 [Vibrio sp. AND4] Length = 162 Score = 126 bits (317), Expect = 1e-27, Method: Composition-based stats. Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 15/168 (8%) Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + ++KIA+ +D N+Y + + A + DY + + V A Y DP Sbjct: 4 ESKQKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATNGKEVASARAYAIASNDP----- 58 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 L GF+V+ K + + K DV + +DA E + ++ +++ SG Sbjct: 59 KQRQFHHILRGVGFEVMLKPYIQRRDGSA----KGDWDVGITLDAIEAAAEVDEIILVSG 114 Query: 122 DGCFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 DG F+ LV +Q++ KKVT+ P + S L AD F+ + Sbjct: 115 DGDFSMLVERIQQRFNKKVTV----YGVPKLTSQNLIDCADNFVAIDE 158 >gi|221633438|ref|YP_002522663.1| hypothetical protein trd_1460 [Thermomicrobium roseum DSM 5159] gi|221157206|gb|ACM06333.1| Protein of unknown function superfamily [Thermomicrobium roseum DSM 5159] Length = 198 Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 57/185 (30%), Positives = 95/185 (51%), Gaps = 16/185 (8%) Query: 1 MFDPRE--KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58 M P + ++A+F D +NLY ++ LG IDY +LL+ + ++ AY Y T+ G+ Sbjct: 1 MVLPNQIDRVAVFFDMSNLYFVARDLGVRIDYARLLEFLVAGRRLVCAYAYVTLAGEE-- 58 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVI 118 S P L WL NGF+VV + + ++ R +D+E+AVD Q+ ++ +V+ Sbjct: 59 --SSAVPFLTWLRRNGFRVVTRTLRRGSDGALR----GDLDLEMAVDVLLQTPHVDVIVL 112 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA--RD 176 +GDG + LV +QR ++V I S P + +L ADY++DL + R Sbjct: 113 VTGDGEYCYLVETVQRLGRRVEIAS----APRNTAVELMELADYYVDLEVNLRHFSQPRP 168 Query: 177 PDEDK 181 P + Sbjct: 169 PAAGR 173 >gi|197335397|ref|YP_002155926.1| hypothetical protein VFMJ11_1205 [Vibrio fischeri MJ11] gi|197316887|gb|ACH66334.1| conserved hypothetical protein [Vibrio fischeri MJ11] Length = 157 Score = 126 bits (316), Expect = 1e-27, Method: Composition-based stats. Identities = 38/166 (22%), Positives = 65/166 (39%), Gaps = 15/166 (9%) Query: 5 REKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 + +A+ +D N+Y +++ DY L V+ A Y D Sbjct: 1 MKTVAILVDVQNIYYTTRDVYQRHFDYNALWAKVTEGRTVVGANAYAIARSDD-----KQ 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 + L GF V K + + K DV + +DA E +E + +V+ SGDG Sbjct: 56 KQFHNILRGIGFDVKLKPFIQRRDGSA----KGDWDVGITLDAIELAEQADIVVLLSGDG 111 Query: 124 CFTTLVAALQ-RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F L+ +Q R K+V + + ++ L AD F+ + Sbjct: 112 DFDLLIKRIQSRFNKEVEV----YGVADLTANSLIDAADRFIPIED 153 >gi|319959094|gb|ADV90711.1| LabA [Nostoc linckia NK105] Length = 160 Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats. Identities = 49/157 (31%), Positives = 81/157 (51%), Gaps = 12/157 (7%) Query: 23 ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVA 82 LG +IDY KLL + ++RA++YT V E+Q L W+ NG++V+AK Sbjct: 2 QLGIEIDYTKLLCRLTGGSRLLRAFFYTGVDRTNEKQ----QGFLLWMRRNGYRVIAKDL 57 Query: 83 KEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIV 142 + + K+++DVE+AVD + + V+ SGDG V ++ + +V +V Sbjct: 58 VQLPDGS----KKANLDVEIAVDMMALVDSYDTAVLVSGDGDLAYAVNSVSYRGVRVEVV 113 Query: 143 STVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 S SM SD L +D ++DL +K +I + P + Sbjct: 114 S----LRSMTSDSLINVSDRYLDLEAIKEDIQKTPRQ 146 >gi|15806586|ref|NP_295301.1| hypothetical protein DR_1578 [Deinococcus radiodurans R1] gi|6459341|gb|AAF11139.1|AE002001_5 conserved hypothetical protein [Deinococcus radiodurans R1] Length = 185 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 10/170 (5%) Query: 4 PREKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 R ++ +FID NLY S++ L +++ +L+ ++ A YT Sbjct: 6 HRPRVGVFIDTQNLYHSARDLLERTVNFETILQVATEGRELVHAISYTVEREGEATS--- 62 Query: 63 LHPLLDWLHYNGFQVVAKVA-KEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 P + L GF+V + G+ + + D+ + D F + L+ +V+ SG Sbjct: 63 -RPFIYKLSTLGFKVRRMNLTLHHVTDGGKPIYEGNWDMGIVADMFRLMDHLDVIVLGSG 121 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 DG FT +V LQ + K+V +++ + +L AD F L ++ Sbjct: 122 DGDFTDIVEVLQERGKRVEVIAF----REHTAQKLIDAADRFTHLPDIEE 167 >gi|77360859|ref|YP_340434.1| hypothetical protein PSHAa1927 [Pseudoalteromonas haloplanktis TAC125] gi|76875770|emb|CAI86991.1| conserved protein of unknown function [Pseudoalteromonas haloplanktis TAC125] Length = 167 Score = 125 bits (315), Expect = 2e-27, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 72/167 (43%), Gaps = 13/167 (7%) Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + + ++ +F+D N+Y + + + G + DY + + + A+ Y GD +Q Sbjct: 9 NTKPRVGIFVDVQNIYYTCRESYGKNFDYNAFWRVMAQQYNIECAFAYAIYRGDEKQSQ- 67 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 + L GF+V K + + K DV + +D E + L+ +++ SG Sbjct: 68 ----FQNILRAIGFEVKLKPFIQRRDGSA----KGDWDVGITIDMLEHGKNLDKVILLSG 119 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 DG F L+ L+ + + V + ++ L++ A+ F + Sbjct: 120 DGDFALLLGHLKS---QYNVSCDVYGADRLTAEALKQSAEQFHLIDN 163 >gi|89072963|ref|ZP_01159510.1| hypothetical protein SKA34_12125 [Photobacterium sp. SKA34] gi|90578998|ref|ZP_01234808.1| hypothetical protein VAS14_04813 [Vibrio angustum S14] gi|89051181|gb|EAR56637.1| hypothetical protein SKA34_12125 [Photobacterium sp. SKA34] gi|90439831|gb|EAS65012.1| hypothetical protein VAS14_04813 [Vibrio angustum S14] Length = 159 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 40/166 (24%), Positives = 68/166 (40%), Gaps = 15/166 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 EK+A+F+D N+Y + K + DY +I AY Y GD Sbjct: 1 MEKVAIFVDVQNIYYTVKEKYRANFDYNAFWAEVSQDREIIAAYAYAIHKGD-----EKQ 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 + L GF+V K + ++ K DV + +D E ++ + +++ SGDG Sbjct: 56 RQFQNILRAIGFEVKLKPFIQRSDGSA----KGDWDVGITLDVIEHAQDADRIILLSGDG 111 Query: 124 CFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F LV +Q K KV + P + + L A ++ ++ Sbjct: 112 DFDLLVDKVQTKYNTKVEV----YGVPGLTATSLINTATHYREIED 153 >gi|325294340|ref|YP_004280854.1| hypothetical protein Dester_0137 [Desulfurobacterium thermolithotrophum DSM 11699] gi|325064788|gb|ADY72795.1| hypothetical protein Dester_0137 [Desulfurobacterium thermolithotrophum DSM 11699] Length = 195 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 45/177 (25%), Positives = 87/177 (49%), Gaps = 13/177 (7%) Query: 7 KIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 ++A+F+D N+Y +K L +D+++LL+ + RA Y + Q Sbjct: 17 RVAVFVDMQNIYYGAKNTLKKKVDFKRLLELGVRGRTLYRAIAYLVDLDKVNQDS----- 71 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDG 123 + L G++V K K+F + + K+ D+ +A+DA +E ++ +V+ SGDG Sbjct: 72 FIYVLRSLGYEVKLKEPKKF-YSWDKIEYKADWDMGIAIDAIAMAENGKIDVVVLMSGDG 130 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 F L+ L+ K KV ++S S+ + +L A+ ++DL + + I + E+ Sbjct: 131 DFVDLINFLKAKGIKVEVISF----RSITAKELIHAANEYIDLGEIGDYIVLEEKEN 183 >gi|94985051|ref|YP_604415.1| hypothetical protein Dgeo_0945 [Deinococcus geothermalis DSM 11300] gi|94555332|gb|ABF45246.1| protein of unknown function DUF88 [Deinococcus geothermalis DSM 11300] Length = 181 Score = 125 bits (314), Expect = 3e-27, Method: Composition-based stats. Identities = 39/172 (22%), Positives = 75/172 (43%), Gaps = 10/172 (5%) Query: 4 PREKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 R ++ +FID NLY S++ L +++ +L++ ++ A YT Sbjct: 6 SRPRVGVFIDTQNLYHSARDLLERTVNFETILRSATEGRELVHAIAYTVEREGEAT---- 61 Query: 63 LHPLLDWLHYNGFQVVAKVA-KEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 P + L G++V G+ + + D+ + D + L+ +V+ SG Sbjct: 62 ARPFIYKLSALGYKVRRMNLTLHHVTEGGKAIYEGNWDMGIVADMVRLIDHLDIVVLGSG 121 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 DG FT +V LQ + K+V +++ + +L AD F L L++ + Sbjct: 122 DGDFTDVVEVLQERGKRVEVIAF----REHTAQKLIDAADRFTHLPDLEDAL 169 >gi|226198540|ref|ZP_03794107.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan 9] gi|225929463|gb|EEH25483.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan 9] Length = 486 Score = 125 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 69/182 (37%), Gaps = 25/182 (13%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M P++ + ALF D N+ + F D + +L+ + ++ Y Sbjct: 1 MALPQDSVNMALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLE 114 + +H F+++ R+ K+S D+ L VDA + ++ Sbjct: 54 -DWDRYKTFKAAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVD 105 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ K+V V + SD L D F+ L E Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKRVIGV----GVKNSTSDLLVANCDEFIFYDDLAREQQ 161 Query: 175 RD 176 R Sbjct: 162 RA 163 >gi|157835942|pdb|2QIP|A Chain A, Crystal Structure Of A Protein Of Unknown Function Vpa0982 From Vibrio Parahaemolyticus Rimd 2210633 Length = 165 Score = 125 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 15/168 (8%) Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 D +EKIA+ +D N+Y + + A + DY + V+ A Y DP Sbjct: 7 DHKEKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATQEKEVVSAKAYAIASNDP----- 61 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 L GF+V K + + K DV + +DA E + ++ +++ SG Sbjct: 62 KQRQFHHILRGVGFEVXLKPYIQRRDGSA----KGDWDVGITLDAIEIAPDVDRVILVSG 117 Query: 122 DGCFTTLVAAL-QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 DG F+ LV + QR KKVT+ P + S L AD F+ + Sbjct: 118 DGDFSLLVERIQQRYNKKVTV----YGVPRLTSQTLIDCADNFVAIDD 161 >gi|294495612|ref|YP_003542105.1| hypothetical protein Mmah_0940 [Methanohalophilus mahii DSM 5219] gi|292666611|gb|ADE36460.1| protein of unknown function DUF88 [Methanohalophilus mahii DSM 5219] Length = 161 Score = 125 bits (313), Expect = 3e-27, Method: Composition-based stats. Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 15/168 (8%) Query: 1 MFDPREKIALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 MF +K+A+F+D N++ S++ + + +DY KLL+A + RA Y D +Q Sbjct: 1 MFSS-QKLAVFVDVQNMFYSARNIHYGRLDYEKLLRAVVMERKLTRAIAYLVETPDIDQS 59 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119 ++ G++V +K K + K D+ +A+DA + ++ +V+ Sbjct: 60 -----GFKSFIGSIGWEVKSKALKVRPDGS----TKGDWDMGIAIDAISIAPKVDTIVLV 110 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 SGDG F L+ L+ +V + S +++L A + Sbjct: 111 SGDGDFVDLINHLKAIGVRVEVHSF----KESTAEELINAATAHYPIE 154 >gi|172060127|ref|YP_001807779.1| hypothetical protein BamMC406_1072 [Burkholderia ambifaria MC40-6] gi|171992644|gb|ACB63563.1| protein of unknown function DUF88 [Burkholderia ambifaria MC40-6] Length = 501 Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 40/188 (21%), Positives = 70/188 (37%), Gaps = 25/188 (13%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M P + + A+F D N+ + + D + +L+ + ++ Y Sbjct: 1 MALPLDNVSMAVFCDFENVALGVRDAKYEKFDIQPVLERLLLKGSIVVKKAYC------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114 + +H F+++ R+ K+S D+ L VDA + ++ Sbjct: 54 -DWERYKGFKASMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVD 105 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ KKV V SD L D F+ L E Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKKVIGV----GVKKSTSDLLVANCDEFIFYDDLVREQQ 161 Query: 175 RDPDEDKK 182 R + ++ Sbjct: 162 RAQAKREQ 169 >gi|237509073|ref|ZP_04521788.1| conserved hypothetical protein [Burkholderia pseudomallei MSHR346] gi|235001278|gb|EEP50702.1| conserved hypothetical protein [Burkholderia pseudomallei MSHR346] Length = 480 Score = 125 bits (313), Expect = 4e-27, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 69/182 (37%), Gaps = 25/182 (13%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M P++ + ALF D N+ + F D + +L+ + ++ Y Sbjct: 1 MALPQDSVNMALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLE 114 + +H F+++ R+ K+S D+ L VDA + ++ Sbjct: 54 -DWDRYKTFKAAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVD 105 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ K+V V + SD L D F+ L E Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKRVIGV----GVKNSTSDLLVANCDEFIFYDDLAREQQ 161 Query: 175 RD 176 R Sbjct: 162 RA 163 >gi|226356465|ref|YP_002786205.1| hypothetical protein Deide_14960 [Deinococcus deserti VCD115] gi|226318455|gb|ACO46451.1| conserved hypothetical protein [Deinococcus deserti VCD115] Length = 193 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 39/172 (22%), Positives = 74/172 (43%), Gaps = 10/172 (5%) Query: 4 PREKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 R ++ LF+D NLY S++ L +++ +L ++ A YT Sbjct: 6 QRPRVGLFVDTQNLYHSARDLLERTVNFETILNVATEGRELVHAISYTVEREGEAT---- 61 Query: 63 LHPLLDWLHYNGFQVVAKVA-KEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 P + L G++V + G+ + + D+ + D + L+ +V+ SG Sbjct: 62 ARPFIYKLSALGYKVRRMNLTLHHVTDGGKAIYEGNWDMGIVADMVRLMDHLDIVVLGSG 121 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 DG +T +V LQ + K+V +++ + +L AD FM L L+ + Sbjct: 122 DGDYTEIVEVLQERGKRVEVIAF----REHTAQKLIDAADRFMHLPDLEGAL 169 >gi|163782630|ref|ZP_02177627.1| hypothetical protein HG1285_17140 [Hydrogenivirga sp. 128-5-R1-1] gi|159882203|gb|EDP75710.1| hypothetical protein HG1285_17140 [Hydrogenivirga sp. 128-5-R1-1] Length = 198 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 45/185 (24%), Positives = 78/185 (42%), Gaps = 17/185 (9%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP------- 56 E++ +FIDG+NL+ + L IDY +L+ R ++RAY+YT V D Sbjct: 2 NEERLMIFIDGSNLFHGIRYLNIKIDYGRLVDFLRESRRLVRAYFYTAVPQDRDVKKGTP 61 Query: 57 -EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGL 113 + LD L +G +V ++ + ++ +D+ LA D + Sbjct: 62 EWESLIRQKRFLDELALSGIKVKLAKLRKLPSG---EFIEKEVDIMLATDMLSLAFQNAY 118 Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 + V+ SGD F V +QR K+V + + +S LR+ D F+ L + Sbjct: 119 DTAVLVSGDSDFIYTVEEIQRIGKRVENATFKKT----SSYNLRKTCDRFVLLDNFLDRF 174 Query: 174 ARDPD 178 + Sbjct: 175 TYEEK 179 >gi|76819463|ref|YP_335506.1| hypothetical protein BURPS1710b_A0347 [Burkholderia pseudomallei 1710b] gi|254262408|ref|ZP_04953273.1| conserved hypothetical protein [Burkholderia pseudomallei 1710a] gi|76583936|gb|ABA53410.1| Protein of unknown function family [Burkholderia pseudomallei 1710b] gi|254213410|gb|EET02795.1| conserved hypothetical protein [Burkholderia pseudomallei 1710a] Length = 483 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 69/182 (37%), Gaps = 25/182 (13%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M P++ + ALF D N+ + F D + +L+ + ++ Y Sbjct: 1 MALPQDSVNMALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLE 114 + +H F+++ R+ K+S D+ L VDA + ++ Sbjct: 54 -DWDRYKTFKAAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVD 105 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ K+V V + SD L D F+ L E Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKRVIGV----GVKNSTSDLLVANCDEFIFYDDLAREQQ 161 Query: 175 RD 176 R Sbjct: 162 RA 163 >gi|323527162|ref|YP_004229315.1| hypothetical protein BC1001_2841 [Burkholderia sp. CCGE1001] gi|323384164|gb|ADX56255.1| hypothetical protein BC1001_2841 [Burkholderia sp. CCGE1001] Length = 534 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 41/187 (21%), Positives = 67/187 (35%), Gaps = 25/187 (13%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M E + ALF D N+ + +D D + +L+ + ++ Y Sbjct: 1 MASSNETVSMALFCDFENVALGVRDAKYDKFDIKLVLERLLLKGSIVVKKAYC------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114 + +H F+++ R+ K+S D+ L VDA + + Sbjct: 54 -DWDRYKSFKGAMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVN 105 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ K+V V SD L D F L E Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKQVIGV----GVQQSTSDLLIANCDEFFFYDDLVRESQ 161 Query: 175 RDPDEDK 181 R + + Sbjct: 162 RAVAKRE 168 >gi|219883176|ref|YP_002478338.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7425] gi|219867301|gb|ACL47639.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7425] Length = 356 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 43/165 (26%), Positives = 76/165 (46%), Gaps = 12/165 (7%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +A+ +D AN+Y LG ++Y +L+ ++ + ++YT + L Sbjct: 188 LAILVDAANIYHCGNELGVKVNYDQLIPGLQAGFESSQVWFYTGLKSGDF----RQQRFL 243 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTT 127 L G+QVV K + K+++DVELA++ + +E +++ SGDG Sbjct: 244 ASLRQQGYQVVTKRVVRHEDGK----EKANLDVELALEMVKLAERYSDILLLSGDGDLAC 299 Query: 128 LVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 V A ++K +V ++S S S L R AD F DL + + Sbjct: 300 AVRAARQKGARVEVISF----RSRTSQDLIRAADDFRDLTDMVDR 340 >gi|126456340|ref|YP_001075832.1| hypothetical protein BURPS1106A_A1798 [Burkholderia pseudomallei 1106a] gi|242312308|ref|ZP_04811325.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b] gi|126230108|gb|ABN93521.1| conserved hypothetical protein [Burkholderia pseudomallei 1106a] gi|242135547|gb|EES21950.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b] Length = 483 Score = 124 bits (312), Expect = 5e-27, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 69/182 (37%), Gaps = 25/182 (13%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M P++ + ALF D N+ + F D + +L+ + ++ Y Sbjct: 1 MALPQDSVNMALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLE 114 + +H F+++ R+ K+S D+ L VDA + ++ Sbjct: 54 -DWDRYKTFKAAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVD 105 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ K+V V + SD L D F+ L E Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKRVIGV----GVKNSTSDLLVANCDEFIFYDDLAREQQ 161 Query: 175 RD 176 R Sbjct: 162 RA 163 >gi|170693531|ref|ZP_02884690.1| protein of unknown function DUF88 [Burkholderia graminis C4D1M] gi|170141686|gb|EDT09855.1| protein of unknown function DUF88 [Burkholderia graminis C4D1M] Length = 534 Score = 124 bits (311), Expect = 5e-27, Method: Composition-based stats. Identities = 41/187 (21%), Positives = 67/187 (35%), Gaps = 25/187 (13%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M E + ALF D N+ + +D D + +L+ + ++ Y Sbjct: 1 MASSNETVSMALFCDFENVALGVRDAKYDKFDIKLVLERLLLKGSIVVKKAYC------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114 + +H F+++ R+ K+S D+ L VDA + + Sbjct: 54 -DWDRYKSFKGAMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVN 105 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ K+V V SD L D F L E Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKQVIGV----GVQQSTSDLLIANCDEFFFYDDLVRESQ 161 Query: 175 RDPDEDK 181 R + + Sbjct: 162 RTVAKRE 168 >gi|149190237|ref|ZP_01868512.1| hypothetical protein VSAK1_15107 [Vibrio shilonii AK1] gi|148835984|gb|EDL52946.1| hypothetical protein VSAK1_15107 [Vibrio shilonii AK1] Length = 174 Score = 124 bits (311), Expect = 5e-27, Method: Composition-based stats. Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 15/166 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 E IA+F+D N+Y +++ A G DY L + A Y DP Sbjct: 16 MESIAIFVDVQNVYYTTRQAFGRRFDYNALWAKLSQSYRIDIARAYAISSTDP-----KQ 70 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + + K DV LA+D +E + ++ +V+ SGDG Sbjct: 71 RQFHHILRGIGFNVQLKPFIQRLDGSA----KGDWDVGLALDVYETANSVDRIVLISGDG 126 Query: 124 CFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F LV +Q++ KVT+ S+ ++ L + AD ++++ Sbjct: 127 DFQVLVERIQQRFNTKVTVA----GVRSLTANNLIQAADDYIEIDS 168 >gi|332993345|gb|AEF03400.1| hypothetical protein ambt_09370 [Alteromonas sp. SN2] Length = 157 Score = 124 bits (311), Expect = 5e-27, Method: Composition-based stats. Identities = 37/162 (22%), Positives = 67/162 (41%), Gaps = 14/162 (8%) Query: 5 REKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 + +ALF+D N+Y +++ + DY + V++A Y GD + Sbjct: 1 MDNVALFVDVQNIYYTTRQIHKCNFDYNHFWRLATEGRNVVKAVAYAIERGD-----TKQ 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 + L GF+V K + + K DV + +DA E ++ + +V +GDG Sbjct: 56 REFQNILRGIGFEVKLKPFIQRADGSA----KGDWDVGITIDAMEYADLADTIVFATGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165 F L + L K K+V + + S L + A ++ Sbjct: 112 DFDILASKLVDKGKEVEV----YGVQELTSVSLIKAASKYVP 149 >gi|163857253|ref|YP_001631550.1| hypothetical protein Bpet2940 [Bordetella petrii DSM 12804] gi|163260981|emb|CAP43283.1| conserved hypothetical protein [Bordetella petrii] Length = 385 Score = 124 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 43/187 (22%), Positives = 69/187 (36%), Gaps = 27/187 (14%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M +E I ALF D N+ + + D + +L+ + ++ Y Sbjct: 44 MTATQESINMALFCDFENVALGVRDANYQKFDIKPVLERLLLKGSIVVKKAYC------- 96 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLE 114 + +H F+++ R+ K+S D+ L VDA + ++ Sbjct: 97 -DWERYREFKATMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKLHVD 148 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ K+V V SD L D F+ L E Sbjct: 149 TFVIISGDSDFSPLVSKLRENAKQVIGV----GVKRSTSDLLIANCDEFIFYDDLVRE-- 202 Query: 175 RDPDEDK 181 R E K Sbjct: 203 RPRAEPK 209 >gi|28900837|ref|NP_800492.1| hypothetical protein VPA0982 [Vibrio parahaemolyticus RIMD 2210633] gi|260362550|ref|ZP_05775470.1| conserved hypothetical protein [Vibrio parahaemolyticus K5030] gi|260879204|ref|ZP_05891559.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034] gi|260896739|ref|ZP_05905235.1| conserved hypothetical protein [Vibrio parahaemolyticus Peru-466] gi|13506637|gb|AAK08637.1| hypothetical protein [Vibrio parahaemolyticus] gi|28809283|dbj|BAC62325.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD 2210633] gi|308087322|gb|EFO37017.1| conserved hypothetical protein [Vibrio parahaemolyticus Peru-466] gi|308094054|gb|EFO43749.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034] gi|308115257|gb|EFO52797.1| conserved hypothetical protein [Vibrio parahaemolyticus K5030] gi|328470741|gb|EGF41652.1| hypothetical protein VP10329_08072 [Vibrio parahaemolyticus 10329] Length = 162 Score = 124 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 46/168 (27%), Positives = 73/168 (43%), Gaps = 15/168 (8%) Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 D +EKIA+ +D N+Y + + A + DY + V+ A Y DP Sbjct: 4 DHKEKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATQEKEVVSAKAYAIASNDP----- 58 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 L GF+V+ K + + K DV + +DA E + ++ +++ SG Sbjct: 59 KQRQFHHILRGVGFEVMLKPYIQRRDGSA----KGDWDVGITLDAIEIAPDVDRVILVSG 114 Query: 122 DGCFTTLVAAL-QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 DG F+ LV + QR KKVT+ P + S L AD F+ + Sbjct: 115 DGDFSLLVERIQQRYNKKVTV----YGVPRLTSQTLIDCADNFVAIDD 158 >gi|119898953|ref|YP_934166.1| hypothetical protein azo2662 [Azoarcus sp. BH72] gi|119671366|emb|CAL95279.1| conserved hypothetical protein [Azoarcus sp. BH72] Length = 481 Score = 124 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 39/178 (21%), Positives = 66/178 (37%), Gaps = 25/178 (14%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M + + ALF D N+ + +D D +++L+ + ++ Y Sbjct: 1 MASSPDNVSMALFCDFENVALGVRDAKYDKFDIKRVLERLLLKGSIVVKKAYC------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLE 114 + +H F+++ R+ K+S D+ L VDA + + Sbjct: 54 -DWERYKGFKAAMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVN 105 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 VI SGD F+ LV+ L+ K+V V SD L D F+ L E Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKQVIGV----GVKQSTSDLLIANCDEFIFYDDLVRE 159 >gi|320334669|ref|YP_004171380.1| hypothetical protein Deima_2072 [Deinococcus maricopensis DSM 21211] gi|319755958|gb|ADV67715.1| Domain of unknown function DUF88 [Deinococcus maricopensis DSM 21211] Length = 182 Score = 124 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 74/179 (41%), Gaps = 11/179 (6%) Query: 5 REKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 + ++ +FID NLY S++ +++ +LL+ ++RA Y Sbjct: 7 KPRVGVFIDTQNLYHSARDLYERTVNFERLLQYATEGRELVRAVSYVVEREGEGT----A 62 Query: 64 HPLLDWLHYNGFQVVAKVAK-EFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 P + L G++V + T G+ + + D+ + D + L+ +V+ SGD Sbjct: 63 RPFIYKLSTIGYKVRRMTLQLHHTNEQGKAIWEGNWDMGIVADMTRLLDHLDVIVLGSGD 122 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 G FT +V Q + +V +++ + +L D + + + + P + K Sbjct: 123 GDFTDMVEVFQERGVRVEVIAF----REHTAQKLVDACDRYTNWSDVDGAFM-PPAKRK 176 >gi|238024602|ref|YP_002908834.1| hypothetical protein bglu_2g12170 [Burkholderia glumae BGR1] gi|237879267|gb|ACR31599.1| Hypothetical protein bglu_2g12170 [Burkholderia glumae BGR1] Length = 538 Score = 124 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 69/182 (37%), Gaps = 25/182 (13%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M P++ + ALF D N+ + F D + +L+ + ++ Y Sbjct: 1 MALPQDSVNMALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114 + +H F+++ R+ K+S D+ L VDA + ++ Sbjct: 54 -DWDRYKTFKGAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVD 105 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ K+V V + SD L D F+ L E Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKRVIGV----GVKNSTSDLLVANCDEFIFYDDLAREQQ 161 Query: 175 RD 176 R Sbjct: 162 RA 163 >gi|257094026|ref|YP_003167667.1| hypothetical protein CAP2UW1_2449 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046550|gb|ACV35738.1| protein of unknown function DUF88 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 460 Score = 124 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 39/178 (21%), Positives = 65/178 (36%), Gaps = 23/178 (12%) Query: 9 ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 AL+ D N+ + +D D + +L+ + ++ Y + Sbjct: 11 ALYCDFENVALGVRDAKYDKFDIKPVLERLLLKGSIVVKKAYC--------DWERYKGFK 62 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 63 STMHEASFELIEIPHL-------RQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGDSD 115 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182 F+ LV+ L+ K V V SD L D F+ L E R D + Sbjct: 116 FSPLVSKLRENAKYVIGV----GVKQSTSDLLIGNCDEFIFYDDLVRESQRAARRDSR 169 >gi|239996208|ref|ZP_04716732.1| hypothetical protein AmacA2_17270 [Alteromonas macleodii ATCC 27126] Length = 153 Score = 124 bits (311), Expect = 6e-27, Method: Composition-based stats. Identities = 38/164 (23%), Positives = 73/164 (44%), Gaps = 14/164 (8%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 K + +D N+Y + + A + +Y + + + A+ Y GD S Sbjct: 1 MNKALVLVDVQNVYYTCRQAYKRNFNYNQFWRELTYNLDIAHAFAYAIDRGD-----SKQ 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 + L GF+V K + + K DV + VDA E ++ ++ +++ SGDG Sbjct: 56 REFQNILRAIGFEVKLKPFIQRADGSA----KGDWDVGITVDALEHADDVDEIILVSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F LV AL+ K K VT+ P++ ++ +++ A ++ + Sbjct: 112 DFDILVNALKAKGKTVTV----YGVPALTAESIQKVASKYVPID 151 >gi|221214025|ref|ZP_03586998.1| protein of unknown function DUF88 [Burkholderia multivorans CGD1] gi|221166202|gb|EED98675.1| protein of unknown function DUF88 [Burkholderia multivorans CGD1] Length = 479 Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats. Identities = 39/180 (21%), Positives = 66/180 (36%), Gaps = 25/180 (13%) Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 A+F D N+ + + D + +L+ + ++ Y + Sbjct: 2 AVFCDFENVALGVRDAKYEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKGFK 53 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVDTFVIVSGDSD 106 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR--DPDEDKK 182 F+ LV+ L+ KKV V SD L D F+ L E R E ++ Sbjct: 107 FSPLVSKLRENAKKVIGV----GVKKSTSDLLVANCDEFIFYDDLVREQQRALAKREQQR 162 >gi|71908802|ref|YP_286389.1| hypothetical protein Daro_3189 [Dechloromonas aromatica RCB] gi|71848423|gb|AAZ47919.1| Protein of unknown function DUF88 [Dechloromonas aromatica RCB] Length = 421 Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats. Identities = 39/180 (21%), Positives = 68/180 (37%), Gaps = 25/180 (13%) Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 ALF D N+ + + D R +L+ ++ ++ Y + Sbjct: 11 ALFCDFENIALGVRDAQYEKFDIRPVLERLLAKGSIVVKKAYC--------DWDRYKAFK 62 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ + VDA + ++ VI SGD Sbjct: 63 AAMHEANFELIEIPHV-------RQSGKNSADIRMVVDALDLCYTKAHVDTFVIISGDSD 115 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK--NEIARDPDEDKK 182 F+ LV+ L+ K+V V SD L D F+ L E R P + ++ Sbjct: 116 FSPLVSKLRENAKRVIGV----GVKQSCSDLLVTNCDEFIYYDDLVRDREAGRGPQQRRE 171 >gi|220910751|ref|YP_002486061.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7425] gi|219867523|gb|ACL47860.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7425] Length = 343 Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats. Identities = 50/165 (30%), Positives = 80/165 (48%), Gaps = 12/165 (7%) Query: 9 ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68 A+FID ANL S++ L +DY+K+ + R ++YT +Q LD Sbjct: 171 AIFIDAANLEYSARDLNLQLDYQKIYRFLTKGMKQPRVFFYTGERPGDARQKKQ----LD 226 Query: 69 WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTL 128 WL G+Q+V K K+++DVELA+D + ++ L V+ SGDG FT Sbjct: 227 WLTGIGYQLVTKKIVRQPGGT----EKANLDVELALDMYRLADTLSRAVLVSGDGDFTQA 282 Query: 129 VAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 + L+++ V ++S S S L + A+ ++DL EI Sbjct: 283 LQLLKQQGIAVDVISF----RSCTSKALIKAANRYIDLEQRTAEI 323 >gi|288817663|ref|YP_003432010.1| hypothetical protein HTH_0343 [Hydrogenobacter thermophilus TK-6] gi|288787062|dbj|BAI68809.1| hypothetical protein HTH_0343 [Hydrogenobacter thermophilus TK-6] gi|308751261|gb|ADO44744.1| protein of unknown function DUF88 [Hydrogenobacter thermophilus TK-6] Length = 199 Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats. Identities = 46/179 (25%), Positives = 77/179 (43%), Gaps = 17/179 (9%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVG--------DP 56 E++ +FIDG+NL+ + + L IDY+KL+ +IRAY+Y + Sbjct: 3 DERVIIFIDGSNLFHAIRYLNIRIDYQKLVDFLTEGRRLIRAYFYGAMPHEKDVKKNTPE 62 Query: 57 EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLE 114 + L+ L G +V K+ + V+ +D+ LA D + + Sbjct: 63 WESLLRQKRFLEELSLMGIKVKTAHLKKLPSG---EYVEKEVDIMLATDMLSMAYMNTYD 119 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 V+ SGD ++ V +QR KKV S + +S QLR+ D F+ L + Sbjct: 120 TAVLISGDSDYSYTVEEVQRIGKKVENASFKRT----SSYQLRKACDRFILLDDYLDRF 174 >gi|221201416|ref|ZP_03574455.1| protein of unknown function DUF88 [Burkholderia multivorans CGD2M] gi|221208028|ref|ZP_03581034.1| protein of unknown function DUF88 [Burkholderia multivorans CGD2] gi|221172213|gb|EEE04654.1| protein of unknown function DUF88 [Burkholderia multivorans CGD2] gi|221178684|gb|EEE11092.1| protein of unknown function DUF88 [Burkholderia multivorans CGD2M] Length = 479 Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats. Identities = 39/180 (21%), Positives = 66/180 (36%), Gaps = 25/180 (13%) Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 A+F D N+ + + D + +L+ + ++ Y + Sbjct: 2 AVFCDFENVALGVRDAKYEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKGFK 53 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVDTFVIVSGDSD 106 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR--DPDEDKK 182 F+ LV+ L+ KKV V SD L D F+ L E R E ++ Sbjct: 107 FSPLVSKLRENAKKVIGV----GVKKSTSDLLVANCDEFIFYDDLVREQQRALAKREQQR 162 >gi|53722351|ref|YP_111336.1| hypothetical protein BPSS1326 [Burkholderia pseudomallei K96243] gi|52212765|emb|CAH38797.1| conserved hypothetical protein [Burkholderia pseudomallei K96243] Length = 483 Score = 123 bits (310), Expect = 8e-27, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 69/182 (37%), Gaps = 25/182 (13%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M P++ + ALF D N+ + F D + +L+ + ++ Y Sbjct: 1 MALPQDSVNMALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLE 114 + +H F+++ R+ K+S D+ L VDA + ++ Sbjct: 54 -DWDRYKTFKAAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVD 105 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ K+V V + SD L D F+ L E Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKRVIGV----GVKNSTSDLLVANCDEFIFYDDLAREQQ 161 Query: 175 RD 176 R Sbjct: 162 RA 163 >gi|87121768|ref|ZP_01077655.1| hypothetical protein MED121_19509 [Marinomonas sp. MED121] gi|86163019|gb|EAQ64297.1| hypothetical protein MED121_19509 [Marinomonas sp. MED121] Length = 163 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 39/162 (24%), Positives = 67/162 (41%), Gaps = 13/162 (8%) Query: 3 DPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 D KIA+F+D N+Y +S+ +Y+K ++ +++AY Y GD S Sbjct: 5 DSAPKIAIFVDVQNIYYTSRHTFARHFNYQKFWDEIAAQGEIVQAYAYAIDKGD-----S 59 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 L GF+V K + + K DV + +D + ++ +V+ SG Sbjct: 60 KQAQFQQILRGIGFEVKLKPFIQRRDGSA----KGDWDVGITIDVLAAAPDVDIIVLASG 115 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163 DG F L+ A + K + S V + + L D + Sbjct: 116 DGDFALLLDAARTKYQ---CQSQVYGVDKLTAAALIDSCDLY 154 >gi|307730797|ref|YP_003908021.1| hypothetical protein BC1003_2777 [Burkholderia sp. CCGE1003] gi|307585332|gb|ADN58730.1| protein of unknown function DUF88 [Burkholderia sp. CCGE1003] Length = 562 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 41/187 (21%), Positives = 67/187 (35%), Gaps = 25/187 (13%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M E + ALF D N+ + +D D + +L+ + ++ Y Sbjct: 1 MASSNETVSMALFCDFENVALGVRDAKYDKFDIKLVLERLLLKGSIVVKKAYC------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114 + +H F+++ R+ K+S D+ L VDA + + Sbjct: 54 -DWDRYKSFKGAMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVN 105 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ K+V V SD L D F L E Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKQVIGV----GVQQSTSDLLIANCDEFFFYDDLVRESQ 161 Query: 175 RDPDEDK 181 R + + Sbjct: 162 RAVAKRE 168 >gi|260901483|ref|ZP_05909878.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ4037] gi|308107667|gb|EFO45207.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ4037] Length = 162 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 46/168 (27%), Positives = 73/168 (43%), Gaps = 15/168 (8%) Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 D +EKIA+ +D N+Y + + A + DY + V+ A Y DP Sbjct: 4 DHKEKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATQEKEVVSAKAYAIASNDP----- 58 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 L GF+V+ K + + K DV + +DA E + ++ +++ SG Sbjct: 59 KQRQFHHILRGVGFEVMLKPYIQRRDGSA----KGDWDVGITLDAIEIAPDVDRVILVSG 114 Query: 122 DGCFTTLVAAL-QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 DG F+ LV + QR KKVT+ P + S L AD F+ + Sbjct: 115 DGDFSLLVERIQQRYNKKVTV----YGAPRLTSQTLIDCADNFVAIDD 158 >gi|161525283|ref|YP_001580295.1| hypothetical protein Bmul_2113 [Burkholderia multivorans ATCC 17616] gi|189349979|ref|YP_001945607.1| hypothetical protein BMULJ_01131 [Burkholderia multivorans ATCC 17616] gi|160342712|gb|ABX15798.1| protein of unknown function DUF88 [Burkholderia multivorans ATCC 17616] gi|189334001|dbj|BAG43071.1| conserved hypothetical protein [Burkholderia multivorans ATCC 17616] Length = 508 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 70/190 (36%), Gaps = 27/190 (14%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M P + + A+F D N+ + + D + +L+ + ++ Y Sbjct: 1 MALPLDNVSMAVFCDFENVALGVRDAKYEKFDIKPVLEKLLLKGSIVVKKAYC------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114 + +H F+++ R+ K+S D+ L VDA + ++ Sbjct: 54 -DWDRYKGFKAAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVD 105 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ KKV V SD L D F+ L E Sbjct: 106 TFVIVSGDSDFSPLVSKLRENAKKVIGV----GVKKSTSDLLVANCDEFIFYDDLVREQQ 161 Query: 175 R--DPDEDKK 182 R E ++ Sbjct: 162 RALAKREQQR 171 >gi|167839964|ref|ZP_02466648.1| hypothetical protein Bpse38_25044 [Burkholderia thailandensis MSMB43] Length = 445 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 40/172 (23%), Positives = 64/172 (37%), Gaps = 23/172 (13%) Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 ALF D N+ + F D R +L+ + ++ Y + Sbjct: 2 ALFCDFENIALGVRDTKFEKFDIRPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 F+ LV+ L+ K+V V + SD L D F+ L E R Sbjct: 107 FSPLVSKLRENAKRVIGV----GVKNSTSDLLVANCDEFIFYDDLAREQQRA 154 >gi|153836889|ref|ZP_01989556.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810] gi|149749847|gb|EDM60592.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810] Length = 162 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 46/168 (27%), Positives = 73/168 (43%), Gaps = 15/168 (8%) Query: 3 DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 D +EKIA+ +D N+Y + + A + DY + V+ A Y DP Sbjct: 4 DHKEKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATQEKEVVSAKAYAIASNDP----- 58 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 L GF+V+ K + + K DV + +DA E + ++ +++ SG Sbjct: 59 KQRQFHHILRGVGFEVMLKPYIQRRDGSA----KGDWDVGITLDAIEITPDVDRVILVSG 114 Query: 122 DGCFTTLVAAL-QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 DG F+ LV + QR KKVT+ P + S L AD F+ + Sbjct: 115 DGDFSLLVERIQQRYNKKVTV----YGVPRLTSQTLIDCADNFVAIDD 158 >gi|241766896|ref|ZP_04764705.1| protein of unknown function DUF88 [Acidovorax delafieldii 2AN] gi|241362653|gb|EER58487.1| protein of unknown function DUF88 [Acidovorax delafieldii 2AN] Length = 316 Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats. Identities = 42/187 (22%), Positives = 68/187 (36%), Gaps = 25/187 (13%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M P + I ALF D N+ + +D D + +L+ + ++ Y Sbjct: 1 MASPTDSISMALFCDFENVALGVRDAKYDKFDIKPVLERLLLKGSIVVKKAYC------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114 + +H F+++ R+ K+S D+ L VDA + + Sbjct: 54 -DWERYKGFKATMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVN 105 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ K+V V SD L D F+ L E Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKQVIGV----GVKQSTSDLLIANCDEFIFYDDLVRESQ 161 Query: 175 RDPDEDK 181 R + Sbjct: 162 RAQARRQ 168 >gi|59711738|ref|YP_204514.1| hypothetical protein VF_1131 [Vibrio fischeri ES114] gi|59479839|gb|AAW85626.1| conserved protein [Vibrio fischeri ES114] Length = 159 Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 37/166 (22%), Positives = 65/166 (39%), Gaps = 15/166 (9%) Query: 5 REKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 + +A+ +D N+Y +++ DY L V+ A Y D Sbjct: 3 MKTVAILVDVQNIYYTTRDVYQRHFDYNALWAKVTEGRTVVGANAYAIARSDD-----KQ 57 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 + L GF V K + + K DV + +DA E +E + +V+ SGDG Sbjct: 58 KQFHNILRGIGFDVKLKPFIQRRDGSA----KGDWDVGITLDAIELAEQADIVVLLSGDG 113 Query: 124 CFTTLVAALQ-RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F L+ +Q R K+V + + ++ + AD F+ + Sbjct: 114 DFDLLIKRIQSRFNKEVEV----YGVADLTANSIIDAADRFIPIED 155 >gi|217418449|ref|ZP_03449956.1| conserved hypothetical protein [Burkholderia pseudomallei 576] gi|217397753|gb|EEC37768.1| conserved hypothetical protein [Burkholderia pseudomallei 576] Length = 500 Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 69/182 (37%), Gaps = 25/182 (13%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M P++ + ALF D N+ + F D + +L+ + ++ Y Sbjct: 18 MALPQDSVNMALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC------- 70 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLE 114 + +H F+++ R+ K+S D+ L VDA + ++ Sbjct: 71 -DWDRYKTFKAAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVD 122 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ K+V V + SD L D F+ L E Sbjct: 123 TFVIISGDSDFSPLVSKLRENAKRVIGV----GVKNSTSDLLVANCDEFIFYDDLAREQQ 178 Query: 175 RD 176 R Sbjct: 179 RA 180 >gi|261253046|ref|ZP_05945619.1| hypothetical protein VIA_003071 [Vibrio orientalis CIP 102891] gi|260936437|gb|EEX92426.1| hypothetical protein VIA_003071 [Vibrio orientalis CIP 102891] Length = 160 Score = 123 bits (308), Expect = 1e-26, Method: Composition-based stats. Identities = 40/166 (24%), Positives = 68/166 (40%), Gaps = 15/166 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 E +A+F+D N+Y +++ + DY + + +A Y DP Sbjct: 1 METVAIFVDVQNIYYTTRDKYRANFDYNQFWYIATEGKQIEQANAYAISSHDP-----KQ 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF V K + + K DV +A+D FE +E ++ +++ SGDG Sbjct: 56 RQFHHILRGIGFNVNLKPFIQRMDGSA----KGDWDVGIALDVFEAAEKVDRVILLSGDG 111 Query: 124 CFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F LV +Q K KV + P + + L +D F+ + Sbjct: 112 DFEILVQRIQEKFNTKVDV----YGVPGLTAQSLIDASDRFIPIDE 153 >gi|237808056|ref|YP_002892496.1| hypothetical protein Tola_1293 [Tolumonas auensis DSM 9187] gi|237500317|gb|ACQ92910.1| protein of unknown function DUF88 [Tolumonas auensis DSM 9187] Length = 162 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 38/165 (23%), Positives = 66/165 (40%), Gaps = 13/165 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 E++ + +D N+Y ++K A + DY K + V++A Y GD Sbjct: 1 MERVVVLVDVQNIYYTTKQAYNCNFDYNAFWKKVTANRQVVKAIAYAIDRGD-----EKQ 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 + L GF+V K + + K + D+ + +DA E ++ + +V+ SGDG Sbjct: 56 RQFQNILRAIGFEVKLKPLIQRVDGTA----KGNWDIGITLDAMEYAKESDIVVLASGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F L+ + K V P S L A F+ + Sbjct: 112 DFDLLINKI---HKDYDAWVEVYGVPKYTSVALVNSASKFIPVDS 153 >gi|315126212|ref|YP_004068215.1| hypothetical protein PSM_A1121 [Pseudoalteromonas sp. SM9913] gi|315014726|gb|ADT68064.1| hypothetical protein PSM_A1121 [Pseudoalteromonas sp. SM9913] Length = 164 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 35/166 (21%), Positives = 72/166 (43%), Gaps = 13/166 (7%) Query: 4 PREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 + ++ +F+D N+Y + + + G + DY + + + A+ Y GD +Q Sbjct: 7 SKPRVGIFVDVQNIYYTCRESYGKNFDYNAFWRMIEQQYDIECAFAYAIYRGDEKQNQ-- 64 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 + L GF+V K + + K DV + +D EQ + L+ +++ SGD Sbjct: 65 ---FQNILRAIGFEVKLKPFIQRRDGSA----KGDWDVGITIDMLEQGKQLDKVILLSGD 117 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 G F L+ L+ + + V + ++ L++ A+ F + Sbjct: 118 GDFALLLGHLKN---QYNVSCDVYGADKLTAEVLKQSAEQFHLIDN 160 >gi|254183703|ref|ZP_04890295.1| conserved hypothetical protein [Burkholderia pseudomallei 1655] gi|184214236|gb|EDU11279.1| conserved hypothetical protein [Burkholderia pseudomallei 1655] Length = 474 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 39/172 (22%), Positives = 64/172 (37%), Gaps = 23/172 (13%) Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 ALF D N+ + F D + +L+ + ++ Y + Sbjct: 2 ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 F+ LV+ L+ K+V V + SD L D F+ L E R Sbjct: 107 FSPLVSKLRENAKRVIGV----GVKNSTSDLLVANCDEFIFYDDLAREQQRA 154 >gi|332535674|ref|ZP_08411432.1| hypothetical protein PH505_dg00100 [Pseudoalteromonas haloplanktis ANT/505] gi|332034924|gb|EGI71450.1| hypothetical protein PH505_dg00100 [Pseudoalteromonas haloplanktis ANT/505] Length = 167 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 35/165 (21%), Positives = 73/165 (44%), Gaps = 13/165 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 + ++ +F+D N+Y + + + G + DY + ++ + A+ Y GD +Q Sbjct: 11 KPRVGIFVDVQNIYYTCRESYGKNFDYNAFWRMMEAQYNIECAFAYAIYRGDEKQNQ--- 67 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 + L GF+V K + + K DV + +D EQ + L+ +++ SGDG Sbjct: 68 --FQNILRAIGFEVKLKPFIQRRDGSA----KGDWDVGITIDMLEQGKNLDKVILLSGDG 121 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F L+ L+ + + V + ++ L++ A+ F + Sbjct: 122 DFALLLGHLKN---QYNVPCDVYGADRLTAEVLKQSAEQFHLIDN 163 >gi|88859966|ref|ZP_01134605.1| hypothetical protein PTD2_18180 [Pseudoalteromonas tunicata D2] gi|88817960|gb|EAR27776.1| hypothetical protein PTD2_18180 [Pseudoalteromonas tunicata D2] Length = 157 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 38/161 (23%), Positives = 69/161 (42%), Gaps = 15/161 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +A+F+D N+Y + + A + +Y + + V A+ Y D Sbjct: 1 MPTLAIFVDVQNVYYTCRQAYQANFNYNQFWREATEGYDVSYAFAYAIGRSD-----EKQ 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 + L GF++ K + ++ K DV + +D + ++ ++ L++ SGDG Sbjct: 56 KQFQNILRAIGFEIKLKPYIQRSDGSA----KGDWDVGITIDMMDYAQSVDKLILVSGDG 111 Query: 124 CFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYF 163 F LV +Q K K V + P++ SD L R A +F Sbjct: 112 DFAMLVDRIQNKYDKPVEV----YGVPTLTSDSLIRSAKHF 148 >gi|167566002|ref|ZP_02358918.1| hypothetical protein BoklE_25814 [Burkholderia oklahomensis EO147] Length = 524 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 39/172 (22%), Positives = 64/172 (37%), Gaps = 23/172 (13%) Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 ALF D N+ + F D + +L+ + ++ Y + Sbjct: 2 ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 F+ LV+ L+ K+V V + SD L D F+ L E R Sbjct: 107 FSPLVSKLRENAKRVIGV----GVKNSTSDLLVANCDEFIFYDDLAREQQRA 154 >gi|126442572|ref|YP_001062878.1| hypothetical protein BURPS668_A1883 [Burkholderia pseudomallei 668] gi|126222063|gb|ABN85568.1| conserved hypothetical protein [Burkholderia pseudomallei 668] Length = 477 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 39/172 (22%), Positives = 64/172 (37%), Gaps = 23/172 (13%) Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 ALF D N+ + F D + +L+ + ++ Y + Sbjct: 2 ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 F+ LV+ L+ K+V V + SD L D F+ L E R Sbjct: 107 FSPLVSKLRENAKRVIGV----GVKNSTSDLLVANCDEFIFYDDLAREQQRA 154 >gi|288818569|ref|YP_003432917.1| hypothetical protein HTH_1263 [Hydrogenobacter thermophilus TK-6] gi|288787969|dbj|BAI69716.1| hypothetical protein HTH_1263 [Hydrogenobacter thermophilus TK-6] gi|308752160|gb|ADO45643.1| protein of unknown function DUF88 [Hydrogenobacter thermophilus TK-6] Length = 165 Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats. Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 13/176 (7%) Query: 5 REKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +++ +FIDGAN Y K L ID KL++ F+ + ++Y E+Q Sbjct: 2 KKRAGIFIDGANFYFIQKHILHQKIDLIKLVEYFKRDYTIYNTFFYLAYREGDEKQ---- 57 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 + L ++G VV K K+ + K S+DV++A+D + + V+ SGD Sbjct: 58 ENFIKLLAFSGITVVKKPIKQLKDGTY----KGSLDVDMALDVLLTKDNYDVAVLCSGDS 113 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 F LV L+ K+V VST +S +L D ++DLA + I + E Sbjct: 114 DFERLVWVLRDFSKEVICVST----KESSSVELVNACDRYIDLADIMPYIKLEERE 165 >gi|313679721|ref|YP_004057460.1| hypothetical protein Ocepr_0830 [Oceanithermus profundus DSM 14977] gi|313152436|gb|ADR36287.1| protein of unknown function DUF88 [Oceanithermus profundus DSM 14977] Length = 184 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 38/178 (21%), Positives = 73/178 (41%), Gaps = 15/178 (8%) Query: 1 MFDPR-----EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVG 54 M P +++ LF+D NLY S++ +++ LLK ++RA Y Sbjct: 1 MKHPMGWNAMQRVGLFVDTQNLYHSARDYYERTVNFESLLKRAVQGRQLVRATAYVVERE 60 Query: 55 DPEQQFSPLHPLLDWLHYNGFQVVAKVA-KEFTENCGRKRVKSSMDVELAVDAFEQSEGL 113 + + P + L G++V T + G+ + + D+ +A D + L Sbjct: 61 NDTSAW----PFIYKLSTMGYRVRRMNLSVHHTTDEGKPIYEGNWDMGIAADMVRLMDAL 116 Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 + +V+ SGDG F ++ L K +V +++ + +L D F L + Sbjct: 117 DVVVLGSGDGDFVDILEVLMEKGIRVEVIAF----KETTAQKLIDAVDQFTHLPEIDE 170 >gi|167742874|ref|ZP_02415648.1| hypothetical protein Bpse14_32667 [Burkholderia pseudomallei 14] gi|254191183|ref|ZP_04897688.1| conserved hypothetical protein [Burkholderia pseudomallei Pasteur 52237] gi|157938856|gb|EDO94526.1| conserved hypothetical protein [Burkholderia pseudomallei Pasteur 52237] Length = 474 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 39/172 (22%), Positives = 64/172 (37%), Gaps = 23/172 (13%) Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 ALF D N+ + F D + +L+ + ++ Y + Sbjct: 2 ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 F+ LV+ L+ K+V V + SD L D F+ L E R Sbjct: 107 FSPLVSKLRENAKRVIGV----GVKNSTSDLLVANCDEFIFYDDLAREQQRA 154 >gi|167723901|ref|ZP_02407137.1| hypothetical protein BpseD_33095 [Burkholderia pseudomallei DM98] Length = 474 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 39/172 (22%), Positives = 64/172 (37%), Gaps = 23/172 (13%) Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 ALF D N+ + F D + +L+ + ++ Y + Sbjct: 2 ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 F+ LV+ L+ K+V V + SD L D F+ L E R Sbjct: 107 FSPLVSKLRENAKRVIGV----GVKNSTSDLLVANCDEFIFYDDLAREQQRA 154 >gi|167923021|ref|ZP_02510112.1| hypothetical protein BpseBC_30982 [Burkholderia pseudomallei BCC215] Length = 477 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 39/172 (22%), Positives = 64/172 (37%), Gaps = 23/172 (13%) Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 ALF D N+ + F D + +L+ + ++ Y + Sbjct: 2 ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 F+ LV+ L+ K+V V + SD L D F+ L E R Sbjct: 107 FSPLVSKLRENAKRVIGV----GVKNSTSDLLVANCDEFIFYDDLAREQQRA 154 >gi|167849880|ref|ZP_02475388.1| hypothetical protein BpseB_31835 [Burkholderia pseudomallei B7210] Length = 474 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 39/172 (22%), Positives = 64/172 (37%), Gaps = 23/172 (13%) Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 ALF D N+ + F D + +L+ + ++ Y + Sbjct: 2 ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 F+ LV+ L+ K+V V + SD L D F+ L E R Sbjct: 107 FSPLVSKLRENAKRVIGV----GVKNSTSDLLVANCDEFIFYDDLAREQQRA 154 >gi|167915186|ref|ZP_02502277.1| hypothetical protein Bpse112_32216 [Burkholderia pseudomallei 112] Length = 474 Score = 122 bits (306), Expect = 2e-26, Method: Composition-based stats. Identities = 39/172 (22%), Positives = 64/172 (37%), Gaps = 23/172 (13%) Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 ALF D N+ + F D + +L+ + ++ Y + Sbjct: 2 ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 F+ LV+ L+ K+V V + SD L D F+ L E R Sbjct: 107 FSPLVSKLRENAKRVIGV----GVKNSTSDLLVANCDEFIFYDDLAREQQRA 154 >gi|295677487|ref|YP_003606011.1| protein of unknown function DUF88 [Burkholderia sp. CCGE1002] gi|295437330|gb|ADG16500.1| protein of unknown function DUF88 [Burkholderia sp. CCGE1002] Length = 515 Score = 122 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 65/182 (35%), Gaps = 25/182 (13%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M E + ALF D N+ + +D D + +L+ + ++ Y Sbjct: 1 MASSNENVSMALFCDFENVALGVRDAKYDKFDIKLVLERLLLKGSIVVKKAYC------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114 + +H F+++ R+ K+S D+ L VDA + + Sbjct: 54 -DWDRYKSFKGAMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVN 105 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ K+V V SD L D F L E Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKQVIGV----GVQQSTSDLLIANCDEFFFYDDLVRESQ 161 Query: 175 RD 176 R Sbjct: 162 RA 163 >gi|167828427|ref|ZP_02459898.1| hypothetical protein Bpseu9_32389 [Burkholderia pseudomallei 9] Length = 469 Score = 122 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 39/172 (22%), Positives = 64/172 (37%), Gaps = 23/172 (13%) Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 ALF D N+ + F D + +L+ + ++ Y + Sbjct: 2 ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 F+ LV+ L+ K+V V + SD L D F+ L E R Sbjct: 107 FSPLVSKLRENAKRVIGV----GVKNSTSDLLVANCDEFIFYDDLAREQQRA 154 >gi|167898481|ref|ZP_02485882.1| hypothetical protein Bpse7_32411 [Burkholderia pseudomallei 7894] Length = 456 Score = 122 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 39/172 (22%), Positives = 64/172 (37%), Gaps = 23/172 (13%) Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 ALF D N+ + F D + +L+ + ++ Y + Sbjct: 2 ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 F+ LV+ L+ K+V V + SD L D F+ L E R Sbjct: 107 FSPLVSKLRENAKRVIGV----GVKNSTSDLLVANCDEFIFYDDLAREQQRA 154 >gi|91785005|ref|YP_560211.1| hypothetical protein Bxe_A0775 [Burkholderia xenovorans LB400] gi|91688959|gb|ABE32159.1| Conserved hypothetical protein [Burkholderia xenovorans LB400] Length = 480 Score = 122 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 41/187 (21%), Positives = 67/187 (35%), Gaps = 25/187 (13%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M E + ALF D N+ + +D D + +L+ + ++ Y Sbjct: 1 MASSNETVSMALFCDFENVALGVRDAKYDKFDIKLVLERLLLKGSIVVKKAYC------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114 + +H F+++ R+ K+S D+ L VDA + + Sbjct: 54 -DWDRYKSFKGAMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVN 105 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ K+V V SD L D F L E Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKQVIGV----GVQQSTSDLLVANCDEFFFYDDLVRESQ 161 Query: 175 RDPDEDK 181 R + + Sbjct: 162 RTVAKRE 168 >gi|167906832|ref|ZP_02494037.1| hypothetical protein BpseN_31680 [Burkholderia pseudomallei NCTC 13177] Length = 470 Score = 122 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 39/172 (22%), Positives = 64/172 (37%), Gaps = 23/172 (13%) Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 ALF D N+ + F D + +L+ + ++ Y + Sbjct: 2 ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 F+ LV+ L+ K+V V + SD L D F+ L E R Sbjct: 107 FSPLVSKLRENAKRVIGV----GVKNSTSDLLVANCDEFIFYDDLAREQQRA 154 >gi|258593302|emb|CBE69641.1| conserved protein of unknown function [NC10 bacterium 'Dutch sediment'] Length = 251 Score = 122 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 39/180 (21%), Positives = 69/180 (38%), Gaps = 23/180 (12%) Query: 2 FDPREKIALFIDGANLYASSKALG-FDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + +++ALFID N+ K + +L+ + ++ Y + Sbjct: 1 MNEEKRLALFIDFENIAIGIKEAKHKQFEIGLVLERLVEKGKIMVKRAYA--------DW 52 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLV 117 LH +++ K + K+S D+ LAVDA + + E L+ V Sbjct: 53 GRYAEHKRALHEAAIELIDIPQKRISG-------KNSADIRLAVDAMDMAYSKEHLDTFV 105 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 I SGD F+ LV+ L+ K+V + + S+ L D F+ L + P Sbjct: 106 IVSGDSDFSPLVSKLRENNKEVIGL----GVKNSVSELLVDNCDEFIYYEDLIRHPKKAP 161 >gi|134295221|ref|YP_001118956.1| hypothetical protein Bcep1808_1110 [Burkholderia vietnamiensis G4] gi|134138378|gb|ABO54121.1| protein of unknown function DUF88 [Burkholderia vietnamiensis G4] Length = 507 Score = 122 bits (305), Expect = 3e-26, Method: Composition-based stats. Identities = 42/190 (22%), Positives = 70/190 (36%), Gaps = 27/190 (14%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M P + I A+F D N+ + + D + +L+ + ++ Y Sbjct: 1 MALPLDNISMAVFCDFENVALGVRDAKYEKFDIKPVLERLLLKGSIVVKKAYC------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114 + +H F+++ R+ K+S D+ L VDA + ++ Sbjct: 54 -DWERYKGFKASMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVD 105 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ KKV V SD L D F+ L E Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKKVIGV----GVKKSTSDLLVANCDEFIFYDDLVREQQ 161 Query: 175 R--DPDEDKK 182 R E ++ Sbjct: 162 RALAKREQQR 171 >gi|296157195|ref|ZP_06840031.1| protein of unknown function DUF88 [Burkholderia sp. Ch1-1] gi|295892531|gb|EFG72313.1| protein of unknown function DUF88 [Burkholderia sp. Ch1-1] Length = 479 Score = 121 bits (304), Expect = 3e-26, Method: Composition-based stats. Identities = 41/187 (21%), Positives = 67/187 (35%), Gaps = 25/187 (13%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M E + ALF D N+ + +D D + +L+ + ++ Y Sbjct: 1 MASSNETVSMALFCDFENVALGVRDAKYDKFDIKLVLERLLLKGSIVVKKAYC------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114 + +H F+++ R+ K+S D+ L VDA + + Sbjct: 54 -DWDRYKSFKGAMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVN 105 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ K+V V SD L D F L E Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKQVIGV----GVQQSTSDLLVANCDEFFFYDDLVRESQ 161 Query: 175 RDPDEDK 181 R + + Sbjct: 162 RTVAKRE 168 >gi|170732518|ref|YP_001764465.1| hypothetical protein Bcenmc03_1168 [Burkholderia cenocepacia MC0-3] gi|169815760|gb|ACA90343.1| protein of unknown function DUF88 [Burkholderia cenocepacia MC0-3] Length = 498 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 70/190 (36%), Gaps = 27/190 (14%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M P + + A+F D N+ + + D + +L+ + ++ Y Sbjct: 1 MALPLDNVSMAVFCDFENVALGVRDAKYEKFDIKPVLERLLLKGSIVVKKAYC------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114 + +H F+++ R+ K+S D+ L VDA + ++ Sbjct: 54 -DWDRYKGFKASMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVD 105 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ KKV V SD L D F+ L E Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKKVIGV----GVKKSTSDLLVANCDEFIFYDDLVREQQ 161 Query: 175 R--DPDEDKK 182 R E ++ Sbjct: 162 RALAKREQQQ 171 >gi|167573079|ref|ZP_02365953.1| hypothetical protein BoklC_24798 [Burkholderia oklahomensis C6786] Length = 468 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 39/172 (22%), Positives = 64/172 (37%), Gaps = 23/172 (13%) Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 ALF D N+ + F D + +L+ + ++ Y + Sbjct: 2 ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 F+ LV+ L+ K+V V + SD L D F+ L E R Sbjct: 107 FSPLVSKLRENAKRVIGV----GVKNSTSDLLVANCDEFIFYDDLAREQQRA 154 >gi|148657548|ref|YP_001277753.1| hypothetical protein RoseRS_3445 [Roseiflexus sp. RS-1] gi|148569658|gb|ABQ91803.1| protein of unknown function DUF88 [Roseiflexus sp. RS-1] Length = 842 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 40/184 (21%), Positives = 75/184 (40%), Gaps = 20/184 (10%) Query: 1 MFDPREK--IALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M + +A+FID N+Y S + L + ++ ++ V+ A Y Sbjct: 32 MATDNPRLDVAVFIDFENVYVSVRDKLDVNPNFEIIMDRVADLGRVVIARAYA------- 84 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRV--KSSMDVELAVDAFEQS---EG 112 + + L+ NG + + + + GR K+S+D+ L +DA + Sbjct: 85 -DWYRYPRVTSALYANGIEPMYVPTYYYDRDLGRTGRAIKNSVDMNLCIDAMKTLYTNPN 143 Query: 113 LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 + V+ +GD F LV A+++ K+V I+ AS L + AD F+ L + Sbjct: 144 IAKFVLATGDRDFIPLVNAIRQHGKEVIII----GVGGAASGHLAQSADEFIFYEQLLGK 199 Query: 173 IARD 176 + Sbjct: 200 KPQP 203 >gi|312881670|ref|ZP_07741448.1| hypothetical protein VIBC2010_10472 [Vibrio caribbenthicus ATCC BAA-2122] gi|309370733|gb|EFP98207.1| hypothetical protein VIBC2010_10472 [Vibrio caribbenthicus ATCC BAA-2122] Length = 158 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 38/165 (23%), Positives = 65/165 (39%), Gaps = 13/165 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 EKIA+F+D N+Y +++ DY + V+ A Y + Sbjct: 1 MEKIAIFVDVQNIYYTTREKYRAHFDYNHFWHVVATEKEVVVANAYAIA-----SKHEKQ 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L GF+V K + + K D+ +A+D ++ S+ ++ +++ SGDG Sbjct: 56 RQFHHILRGIGFEVKLKPFLQRKDGTA----KGDWDIGIALDIYDISKEVDRVILLSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F LV ++ K V PS+ S L D F + Sbjct: 112 DFEVLVDRVK---KTSNAKFDVFGVPSLTSQSLIDVCDNFTPIDE 153 >gi|83717296|ref|YP_439296.1| hypothetical protein BTH_II1099 [Burkholderia thailandensis E264] gi|83651121|gb|ABC35185.1| Protein of unknown function family [Burkholderia thailandensis E264] Length = 472 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 69/182 (37%), Gaps = 25/182 (13%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M P++ + ALF D N+ + F D + +L+ + ++ Y Sbjct: 1 MALPQDSVNMALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLE 114 + +H F+++ R+ K+S D+ L VDA + ++ Sbjct: 54 -DWDRYKTFKAAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVD 105 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ K+V V + SD L D F+ L E Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKRVIGV----GVKNSTSDLLVANCDEFIFYDDLAREQQ 161 Query: 175 RD 176 R Sbjct: 162 RA 163 >gi|90415555|ref|ZP_01223489.1| hypothetical protein GB2207_09566 [marine gamma proteobacterium HTCC2207] gi|90332878|gb|EAS48048.1| hypothetical protein GB2207_09566 [marine gamma proteobacterium HTCC2207] Length = 161 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 40/163 (24%), Positives = 73/163 (44%), Gaps = 16/163 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIA+F+D N+Y + K G +YR+L + + +++A Y D Q Sbjct: 1 MKKIAVFVDVQNIYYTVKEQFGCYFNYRELWRQLGEQGEIVQATAYAIERNDAGQ----- 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFS 120 L GF+V K + ++ K DV +A+D + + E +V+ S Sbjct: 56 RGFQQVLRDIGFEVKLKPFIQRSDGSA----KGDWDVGIAIDIMDCAATTNPPEEIVLLS 111 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163 GDG F L+A + + + + ++V ++ + L AD+F Sbjct: 112 GDGDFDLLLARVSQ---RYAVSTSVFGVAALTAASLIDAADHF 151 >gi|254174034|ref|ZP_04880697.1| protein of unknown function [Burkholderia mallei ATCC 10399] gi|254356680|ref|ZP_04972955.1| protein of unknown function [Burkholderia mallei 2002721280] gi|148025707|gb|EDK83830.1| protein of unknown function [Burkholderia mallei 2002721280] gi|160695081|gb|EDP85051.1| protein of unknown function [Burkholderia mallei ATCC 10399] Length = 477 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 39/172 (22%), Positives = 64/172 (37%), Gaps = 23/172 (13%) Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 ALF D N+ + F D + +L+ + ++ Y + Sbjct: 2 ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 F+ LV+ L+ K+V V + SD L D F+ L E R Sbjct: 107 FSPLVSKLRENAKRVIGV----GVKNSTSDLLVANCDEFIFYDDLAREQQRA 154 >gi|209517483|ref|ZP_03266324.1| protein of unknown function DUF88 [Burkholderia sp. H160] gi|209502137|gb|EEA02152.1| protein of unknown function DUF88 [Burkholderia sp. H160] Length = 505 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 65/182 (35%), Gaps = 25/182 (13%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M E + ALF D N+ + +D D + +L+ + ++ Y Sbjct: 1 MASSNENVSMALFCDFENVALGVRDAKYDKFDIKLVLERLLLKGSIVVKKAYC------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114 + +H F+++ R+ K+S D+ L VDA + + Sbjct: 54 -DWDRYKSFKGAMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVN 105 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ K+V V SD L D F L E Sbjct: 106 TFVIISGDSDFSPLVSKLRENDKQVIGV----GVQQSTSDLLIANCDEFFFYDDLVRESQ 161 Query: 175 RD 176 R Sbjct: 162 RA 163 >gi|187925165|ref|YP_001896807.1| hypothetical protein Bphyt_3191 [Burkholderia phytofirmans PsJN] gi|187716359|gb|ACD17583.1| protein of unknown function DUF88 [Burkholderia phytofirmans PsJN] Length = 478 Score = 121 bits (304), Expect = 4e-26, Method: Composition-based stats. Identities = 41/187 (21%), Positives = 67/187 (35%), Gaps = 25/187 (13%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M E + ALF D N+ + +D D + +L+ + ++ Y Sbjct: 1 MASSNETVSMALFCDFENVALGVRDAKYDKFDIKLVLERLLLKGSIVVKKAYC------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114 + +H F+++ R+ K+S D+ L VDA + + Sbjct: 54 -DWDRYKSFKGAMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVN 105 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ K+V V SD L D F L E Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKQVIGV----GVQQSTSDLLIANCDEFFFYDDLVRESQ 161 Query: 175 RDPDEDK 181 R + + Sbjct: 162 RTVAKRE 168 >gi|167820046|ref|ZP_02451726.1| hypothetical protein Bpse9_33267 [Burkholderia pseudomallei 91] Length = 460 Score = 121 bits (303), Expect = 4e-26, Method: Composition-based stats. Identities = 39/172 (22%), Positives = 64/172 (37%), Gaps = 23/172 (13%) Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 ALF D N+ + F D + +L+ + ++ Y + Sbjct: 2 ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 F+ LV+ L+ K+V V + SD L D F+ L E R Sbjct: 107 FSPLVSKLRENAKRVIGV----GVKNSTSDLLVANCDEFIFYDDLAREQQRA 154 >gi|317970442|ref|ZP_07971832.1| hypothetical protein SCB02_12967 [Synechococcus sp. CB0205] Length = 168 Score = 120 bits (302), Expect = 6e-26, Method: Composition-based stats. Identities = 47/173 (27%), Positives = 88/173 (50%), Gaps = 12/173 (6%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAF--RSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 +AL +DG +++ + LG+ D R+LL+ +S + A++YT + +Q P Sbjct: 3 LALAVDGHSMFYVQQKLGWFFDPRRLLEYATAQSGVELGSAFWYTGLKDATDQ-----RP 57 Query: 66 LLDWLHYNGFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 D L GF V K +E ++ R+ ++++DVE+A+D + ++ + + SG Sbjct: 58 FRDALTSLGFTVRTKPLREVGHDSDQRQFARANLDVEIAIDLMAVAHRIDEVWVMSGSRD 117 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 L+ L+ + KV ++ST M +LR AD F+DL+ LK ++ + Sbjct: 118 LERLLEVLRIRGLKVVLMST----EGMVPRELRNAADRFVDLSSLKPQLEKTD 166 >gi|326794335|ref|YP_004312155.1| hypothetical protein Marme_1044 [Marinomonas mediterranea MMB-1] gi|326545099|gb|ADZ90319.1| Domain of unknown function DUF88 [Marinomonas mediterranea MMB-1] Length = 204 Score = 120 bits (302), Expect = 6e-26, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 62/162 (38%), Gaps = 13/162 (8%) Query: 10 LFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68 +F+D N+Y +++ DY S+ + AY Y GD + Sbjct: 53 IFVDVQNIYYTTRQTYRRGFDYNAFWAEVSSKYDIKNAYAYAIDRGD-----EKQKQFQN 107 Query: 69 WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTL 128 L GF V K + + K DV + +D E +E + +++ +GDG F+ L Sbjct: 108 ILRAIGFDVKLKPYIQRADGS----SKGDWDVGITIDVMEHAEESDVVILVTGDGDFSIL 163 Query: 129 VAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 ++ K + + V + + L AD + + + Sbjct: 164 ADKIKGKYR---CLVEVYGVEKLTATSLINTADVYYPIEDSR 202 >gi|168703228|ref|ZP_02735505.1| hypothetical protein GobsU_27096 [Gemmata obscuriglobus UQM 2246] Length = 532 Score = 120 bits (302), Expect = 6e-26, Method: Composition-based stats. Identities = 39/185 (21%), Positives = 72/185 (38%), Gaps = 29/185 (15%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +A+FID N+ + K+L+ + ++ Y +S Sbjct: 13 LAVFIDFENMGLGFNNRRDRFEISKVLERLVEKGKIVCKKAYA--------DWSRFGMYT 64 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGC 124 LH + +++ + K+S D+ L VDA + + + ++ VI SGD Sbjct: 65 GALHESAIELIEIPRR-------GMTGKNSADIRLVVDAIDLAYSKDHIDTFVIVSGDSD 117 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL-KNEI------ARDP 177 F+ LV+ L+ K V + + SD LR D F+ L + I + P Sbjct: 118 FSPLVSKLKELGKHVIGLGLSDA----TSDLLRDNCDEFIYYEDLDRAPIIPIAVNEQIP 173 Query: 178 DEDKK 182 ++ +K Sbjct: 174 EKKRK 178 >gi|319790275|ref|YP_004151908.1| hypothetical protein Theam_1304 [Thermovibrio ammonificans HB-1] gi|317114777|gb|ADU97267.1| hypothetical protein Theam_1304 [Thermovibrio ammonificans HB-1] Length = 181 Score = 120 bits (302), Expect = 7e-26, Method: Composition-based stats. Identities = 45/169 (26%), Positives = 79/169 (46%), Gaps = 13/169 (7%) Query: 8 IALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 + +F+D N+Y +K L +D++ LLK + RA Y + Q Sbjct: 18 VGVFVDMQNIYYGAKNTLKRKVDFKNLLKIAVRGRQLYRAIAYLVDLERVNQD-----GF 72 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGC 124 + L G++V K K+F N + K+ D+ +A+DA +E ++ +V+ SGDG Sbjct: 73 IYVLRSIGYEVKLKEPKKF-YNWDKVEYKADWDMGIAIDAIAMAENGKVDVVVLMSGDGD 131 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 F L+ L+ K KV ++S S+ + +L A ++DL + I Sbjct: 132 FVDLINFLKAKGIKVEVISF----RSITAKELIYSASEYIDLEEFADFI 176 >gi|114562206|ref|YP_749719.1| hypothetical protein Sfri_1028 [Shewanella frigidimarina NCIMB 400] gi|114333499|gb|ABI70881.1| protein of unknown function DUF88 [Shewanella frigidimarina NCIMB 400] Length = 157 Score = 120 bits (302), Expect = 7e-26, Method: Composition-based stats. Identities = 41/161 (25%), Positives = 70/161 (43%), Gaps = 13/161 (8%) Query: 8 IALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 +A+F+D N+Y + K G +YR L K ++ + A Y D Q Sbjct: 4 LAVFVDVQNIYYTCKQGFGRSFNYRALYKHLSAQGCISHAIAYAIAPADDGQ-----VKF 58 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126 D L + GF V K + ++ K DV + +D E + ++ +++ SGDG F Sbjct: 59 QDALKHIGFTVKTKPYIQRSDGSA----KGDWDVGITIDMLEIAPTVDEVILLSGDGDFD 114 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 L L++ + T + VLS + + L QA +F + Sbjct: 115 LL---LKKINQTTTCYTHVLSVERLTAKSLTDQAQHFTAID 152 >gi|74317958|ref|YP_315698.1| hypothetical protein Tbd_1940 [Thiobacillus denitrificans ATCC 25259] gi|74057453|gb|AAZ97893.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC 25259] Length = 308 Score = 120 bits (301), Expect = 7e-26, Method: Composition-based stats. Identities = 38/178 (21%), Positives = 64/178 (35%), Gaps = 23/178 (12%) Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 A+F D N+ K + D R +L+ + ++ Y + Sbjct: 10 AVFCDFENVAIGLKEGNYPDFKIRPVLERLLLKGSIVVKKAYC--------DWDRYKEYK 61 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ + VDA + ++ VI SGD Sbjct: 62 RDMHEAAFELIEIPHV-------RQSGKNSADIRMVVDALDLCYTKAHIDAFVIISGDSD 114 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182 F+ L++ L+ K V + AS L D F+ L AR KK Sbjct: 115 FSPLISKLKENGKSVIGI----GVRGSASSLLISNCDEFIFYEDLVQPKARPTRPAKK 168 >gi|325525773|gb|EGD03507.1| hypothetical protein B1M_16120 [Burkholderia sp. TJI49] Length = 287 Score = 120 bits (301), Expect = 8e-26, Method: Composition-based stats. Identities = 39/180 (21%), Positives = 66/180 (36%), Gaps = 25/180 (13%) Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 A+F D N+ + + D + +L+ + ++ Y + Sbjct: 2 AVFCDFENVALGVRDAKYEKFDIKPVLERLLLKGSIVVKKAYC--------DWDRYKGFK 53 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGDSD 106 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR--DPDEDKK 182 F+ LV+ L+ KKV V SD L D F+ L E R E ++ Sbjct: 107 FSPLVSKLRENAKKVIGV----GVKKSTSDLLVANCDEFIFYDDLVREQQRALAKREQQR 162 >gi|254245848|ref|ZP_04939169.1| hypothetical protein BCPG_00568 [Burkholderia cenocepacia PC184] gi|124870624|gb|EAY62340.1| hypothetical protein BCPG_00568 [Burkholderia cenocepacia PC184] Length = 500 Score = 120 bits (301), Expect = 8e-26, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 70/190 (36%), Gaps = 27/190 (14%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M P + + A+F D N+ + + D + +L+ + ++ Y Sbjct: 1 MALPLDNVSMAVFCDFENVALGVRDAKYEKFDIKPVLERLLLKGSIVVKKAYC------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114 + +H F+++ R+ K+S D+ L VDA + ++ Sbjct: 54 -DWDRYKGFKASMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVD 105 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ KKV V SD L D F+ L E Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKKVIGV----GVKKSTSDLLVANCDEFIFYDDLVREQQ 161 Query: 175 R--DPDEDKK 182 R E ++ Sbjct: 162 RALAKREQQQ 171 >gi|78065774|ref|YP_368543.1| hypothetical protein Bcep18194_A4302 [Burkholderia sp. 383] gi|77966519|gb|ABB07899.1| protein of unknown function DUF88 [Burkholderia sp. 383] Length = 496 Score = 120 bits (301), Expect = 8e-26, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 70/190 (36%), Gaps = 27/190 (14%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M P + + A+F D N+ + + D + +L+ + ++ Y Sbjct: 1 MALPLDNVSMAVFCDFENVALGVRDAKYEKFDIKPVLERLLLKGSIVVKKAYC------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114 + +H F+++ R+ K+S D+ L VDA + ++ Sbjct: 54 -DWDRYKGFKASMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVD 105 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ KKV V SD L D F+ L E Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKKVIGV----GVKKSTSDLLVANCDEFIFYDDLVREQQ 161 Query: 175 R--DPDEDKK 182 R E ++ Sbjct: 162 RALAKREQQQ 171 >gi|218290176|ref|ZP_03494335.1| protein of unknown function DUF88 [Alicyclobacillus acidocaldarius LAA1] gi|258512267|ref|YP_003185701.1| hypothetical protein Aaci_2303 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|218239771|gb|EED06961.1| protein of unknown function DUF88 [Alicyclobacillus acidocaldarius LAA1] gi|257478993|gb|ACV59312.1| protein of unknown function DUF88 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 168 Score = 120 bits (301), Expect = 9e-26, Method: Composition-based stats. Identities = 50/171 (29%), Positives = 92/171 (53%), Gaps = 9/171 (5%) Query: 7 KIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 +++LF+DGAN Y + L + ID +KLL+ +S+ ++ A+YY + + Sbjct: 2 RVSLFVDGANYYYMQRDKLKWTIDAQKLLEWAKSKGELVDAFYYIGRSSPSDVREQK--- 58 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 LD L Y+G+ +V K KE + G K+++D+E+ +D F E + ++ SGDG F Sbjct: 59 YLDMLAYSGYSIVTKDIKEIVQEDGSITRKANLDIEIVLDMFNTIENYDMAILVSGDGDF 118 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD-YFMDLAYLKNEIAR 175 + L+ + KK ++ST + +LR A +F+D+ L++++ R Sbjct: 119 ERALQLLRARGKKFIVLSTA----GFIASELRMVAGMHFIDVNTLRDQLER 165 >gi|206559459|ref|YP_002230220.1| hypothetical protein BCAL1072 [Burkholderia cenocepacia J2315] gi|198035497|emb|CAR51375.1| conserved hypothetical protein [Burkholderia cenocepacia J2315] Length = 491 Score = 120 bits (301), Expect = 9e-26, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 70/190 (36%), Gaps = 27/190 (14%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M P + + A+F D N+ + + D + +L+ + ++ Y Sbjct: 1 MALPLDNVSMAVFCDFENVALGVRDAKYEKFDIKPVLERLLLKGSIVVKKAYC------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114 + +H F+++ R+ K+S D+ L VDA + ++ Sbjct: 54 -DWDRYKGFKASMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVD 105 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ KKV V SD L D F+ L E Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKKVIGV----GVKKSTSDLLVANCDEFIFYDDLVREQQ 161 Query: 175 R--DPDEDKK 182 R E ++ Sbjct: 162 RALAKREQQQ 171 >gi|15605927|ref|NP_213304.1| hypothetical protein aq_430 [Aquifex aeolicus VF5] gi|2983099|gb|AAC06705.1| hypothetical protein aq_430 [Aquifex aeolicus VF5] Length = 183 Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 45/168 (26%), Positives = 73/168 (43%), Gaps = 13/168 (7%) Query: 8 IALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 A+F+DG NLY K L ID K + F+ + ++Y + E+Q Sbjct: 26 AAIFVDGTNLYFIQKNFLNAKIDIVKFVNYFKQFYDIYNTFFYLAYKEEDEKQER----F 81 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126 L ++G VV K K+ + K +DV++A+D + + ++ SGD F Sbjct: 82 FKLLAFSGITVVKKPVKQLKDGSL----KGDVDVDIAIDMLLTKDNYDTAILCSGDSDFE 137 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 LV L+ K+V VST +S +L D ++DL + I Sbjct: 138 RLVYVLRNFGKEVICVST----KESSSIELVNACDRYIDLKEILPFIK 181 >gi|152994925|ref|YP_001339760.1| hypothetical protein Mmwyl1_0893 [Marinomonas sp. MWYL1] gi|150835849|gb|ABR69825.1| protein of unknown function DUF88 [Marinomonas sp. MWYL1] Length = 158 Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 39/166 (23%), Positives = 66/166 (39%), Gaps = 15/166 (9%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 + + +D N+Y +++ A G DY + V++A Y GD Sbjct: 1 MTNVTILVDVQNVYYTTRQAFGRSFDYNTFWQQATEGRNVVKAIAYAIDRGD-----EKQ 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 + L GF+V K + ++ K DV +A+D E + + LV+ SGDG Sbjct: 56 RQFQNILRAIGFEVKLKPFIQRSDGSA----KGDWDVGIAIDGIEHGKDSDVLVLLSGDG 111 Query: 124 CFTTLVAALQRKVK-KVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F L L+ K + +V + S+ + L AD F + Sbjct: 112 DFDILAKTLREKYQTRVEV----YGVESLTAQSLINAADSFTAIGN 153 >gi|163782049|ref|ZP_02177048.1| hypothetical protein HG1285_17989 [Hydrogenivirga sp. 128-5-R1-1] gi|159882581|gb|EDP76086.1| hypothetical protein HG1285_17989 [Hydrogenivirga sp. 128-5-R1-1] Length = 165 Score = 120 bits (300), Expect = 1e-25, Method: Composition-based stats. Identities = 46/171 (26%), Positives = 77/171 (45%), Gaps = 13/171 (7%) Query: 5 REKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 ++ +FIDG NLY K L ID KL++ F+ + ++Y + ++Q Sbjct: 1 MKRAGIFIDGTNLYFVQKNFLHRKIDIVKLVEYFKRFYSIYNVFFYLAYREEDDKQEK-- 58 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L ++G VV K K + K ++DVE+ +D + + V+ SGD Sbjct: 59 --FYRMLAFSGITVVRKPLKHLPDGSL----KGNLDVEIVIDMLLTKDNYDVAVLCSGDS 112 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 F L+ L+ K+V VST +S ++ AD ++DL + EI Sbjct: 113 DFEKLINVLRSFGKEVVCVST----RDSSSIEVVNAADRYIDLRDIIEEIK 159 >gi|186475309|ref|YP_001856779.1| hypothetical protein Bphy_0541 [Burkholderia phymatum STM815] gi|184191768|gb|ACC69733.1| protein of unknown function DUF88 [Burkholderia phymatum STM815] Length = 440 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 39/187 (20%), Positives = 68/187 (36%), Gaps = 25/187 (13%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M ++ + ALF D N+ + + D + +L+ + ++ Y Sbjct: 1 MASSQDTVSMALFCDFENVALGVRDAKYEKFDIKLVLERLLLKGSIVVKKAYC------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114 + +H F+++ R+ K+S D+ L VDA + + Sbjct: 54 -DWDRYKGFKAAMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVN 105 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ K+V V SD L D F+ L E Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKQVIGV----GVQRSTSDLLTANCDEFIFYDDLVRESQ 161 Query: 175 RDPDEDK 181 R + + Sbjct: 162 RAAAKRE 168 >gi|107022270|ref|YP_620597.1| hypothetical protein Bcen_0714 [Burkholderia cenocepacia AU 1054] gi|116689215|ref|YP_834838.1| hypothetical protein Bcen2424_1193 [Burkholderia cenocepacia HI2424] gi|105892459|gb|ABF75624.1| protein of unknown function DUF88 [Burkholderia cenocepacia AU 1054] gi|116647304|gb|ABK07945.1| protein of unknown function DUF88 [Burkholderia cenocepacia HI2424] Length = 498 Score = 119 bits (299), Expect = 1e-25, Method: Composition-based stats. Identities = 40/188 (21%), Positives = 70/188 (37%), Gaps = 25/188 (13%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M P + + A+F D N+ + + D + +L+ + ++ Y Sbjct: 1 MALPLDNVSMAVFCDFENVALGVRDAKYEKFDIKPVLERLLLKGSIVVKKAYC------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114 + +H F+++ R+ K+S D+ L VDA + ++ Sbjct: 54 -DWDRYKGFKASMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVD 105 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 VI SGD F+ LV+ L+ KKV V SD L D F+ L E Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKKVIGV----GVKKSTSDLLVANCDEFIFYDDLVREQQ 161 Query: 175 RDPDEDKK 182 R + ++ Sbjct: 162 RALAKREQ 169 >gi|300087254|ref|YP_003757776.1| hypothetical protein Dehly_0124 [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299526987|gb|ADJ25455.1| protein of unknown function DUF88 [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 227 Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats. Identities = 38/175 (21%), Positives = 66/175 (37%), Gaps = 10/175 (5%) Query: 1 MFDPREKIALFIDGANLYASSKA--LGFDIDYRKLLKAFRSRAIVIRAYYYTTVV--GDP 56 M + +++ +FIDG+N+Y S KA DID K +IR YYY V + Sbjct: 1 MAERDDRVMIFIDGSNMYHSLKAHWHRSDIDLSKFCAKLVGERRLIRIYYYNVEVGQREE 60 Query: 57 EQQFSPLHPLLDWLHYNGF-QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGL 113 +++ D + + ++ + + +DV LA D Sbjct: 61 PERYKDQKVFFDSVEAMPYTELRLGRLVYTSGWPNTPPFEKGVDVMLATDMLTHCFKNNY 120 Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 ++ +GD F + A++ K V + S LR+ AD D+ Sbjct: 121 NTAILVAGDADFVGALQAVKDYGKHVEVALFG---EEGTSVPLRKVADVVHDIDK 172 >gi|167577696|ref|ZP_02370570.1| hypothetical protein BthaT_06146 [Burkholderia thailandensis TXDOH] Length = 463 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 39/172 (22%), Positives = 64/172 (37%), Gaps = 23/172 (13%) Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 ALF D N+ + F D + +L+ + ++ Y + Sbjct: 2 ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 F+ LV+ L+ K+V V + SD L D F+ L E R Sbjct: 107 FSPLVSKLRENAKRVIGV----GVKNSTSDLLVANCDEFIFYDDLAREQQRA 154 >gi|167615822|ref|ZP_02384457.1| hypothetical protein BthaB_05981 [Burkholderia thailandensis Bt4] gi|257142413|ref|ZP_05590675.1| hypothetical protein BthaA_24818 [Burkholderia thailandensis E264] Length = 463 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 39/172 (22%), Positives = 64/172 (37%), Gaps = 23/172 (13%) Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 ALF D N+ + F D + +L+ + ++ Y + Sbjct: 2 ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 54 AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 F+ LV+ L+ K+V V + SD L D F+ L E R Sbjct: 107 FSPLVSKLRENAKRVIGV----GVKNSTSDLLVANCDEFIFYDDLAREQQRA 154 >gi|156744317|ref|YP_001434446.1| hypothetical protein Rcas_4412 [Roseiflexus castenholzii DSM 13941] gi|156235645|gb|ABU60428.1| protein of unknown function DUF88 [Roseiflexus castenholzii DSM 13941] Length = 787 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 40/184 (21%), Positives = 75/184 (40%), Gaps = 20/184 (10%) Query: 1 MFDPREK--IALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M + +A+FID N+Y S + L + ++ ++ V+ A Y Sbjct: 1 MATDNPRLDVAVFIDFENVYVSVRDKLDVNPNFEIIMDRVADLGRVVIARAYA------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRV--KSSMDVELAVDAFEQS---EG 112 + + L+ NG + + + + GR K+S+D+ L +DA + Sbjct: 54 -DWYRYPRVTSALYANGIEPMYVPTYYYDRDLGRTGRAIKNSVDMNLCIDAMKTLYTNPN 112 Query: 113 LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 + V+ +GD F LV A+++ K+V I+ AS L + AD F+ L + Sbjct: 113 IGKFVLATGDRDFIPLVNAIRQHGKEVIII----GVGGAASGHLAQSADEFIFYEQLLGK 168 Query: 173 IARD 176 + Sbjct: 169 KPQP 172 >gi|331005219|ref|ZP_08328612.1| hypothetical protein IMCC1989_1379 [gamma proteobacterium IMCC1989] gi|330420962|gb|EGG95235.1| hypothetical protein IMCC1989_1379 [gamma proteobacterium IMCC1989] Length = 170 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 69/168 (41%), Gaps = 15/168 (8%) Query: 4 PREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 R+KIA+F+D N+Y +++ +YR L + +++ ++ A Y GD Sbjct: 10 SRKKIAVFVDVQNIYYTTRDRYNKPFNYRHLWQRLQAQGDIVIANAYAIHRGDD-----K 64 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFS 120 L GF + K + + K DV +A+D + + + +++ S Sbjct: 65 QLQFQSALKSIGFTMKLKPYIQRKDGSA----KGDWDVGIAIDVMDVAASGTADTIILLS 120 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 GDG F L+ ++ K + + V + ++ L A F + Sbjct: 121 GDGDFDLLLEKVK---KDYHMTTEVYGVAELTANSLITSATTFHPITE 165 >gi|119471730|ref|ZP_01614090.1| hypothetical protein ATW7_08766 [Alteromonadales bacterium TW-7] gi|119445353|gb|EAW26641.1| hypothetical protein ATW7_08766 [Alteromonadales bacterium TW-7] Length = 162 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 35/163 (21%), Positives = 71/163 (43%), Gaps = 13/163 (7%) Query: 7 KIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 K+ +F+D N+Y + + + + DY + + + + A+ Y GD +Q Sbjct: 8 KVGIFVDVQNIYYTCRESYSKNFDYNAFWRVIQEQYEIDCAFAYAIYRGDEKQNQ----- 62 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 + L GF+V K + + K DV + +D E + L+ +++ SGDG F Sbjct: 63 FQNILRAIGFEVKLKPFIQRRDGSA----KGDWDVGITIDMLEHGKNLDKVILLSGDGDF 118 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 L+A L+ + + V + ++ L++ A+ F + Sbjct: 119 ALLLAHLKN---QYNVPCDVYGADKLTAEVLKQSAEQFHLIDD 158 >gi|297567046|ref|YP_003686018.1| hypothetical protein Mesil_2661 [Meiothermus silvanus DSM 9946] gi|296851495|gb|ADH64510.1| protein of unknown function DUF88 [Meiothermus silvanus DSM 9946] Length = 181 Score = 119 bits (298), Expect = 2e-25, Method: Composition-based stats. Identities = 44/170 (25%), Positives = 82/170 (48%), Gaps = 12/170 (7%) Query: 5 REKIALFIDGANLYA---SSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 E++A+FIDG+NLY SS + + +D+ + ++ + ++RAYYY + + Sbjct: 1 MERVAVFIDGSNLYKGLVSSLSSDYRLDFVQFIETLVAGRKLLRAYYYNAPLPVEDPAAK 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIF 119 L++L + V E G V+ +D+++A+D + + + V+ Sbjct: 61 AHQSFLNYLKRVPYVAVRLGRLERR---GEGFVEKGVDIQIAIDLLKLAYANAYDVAVLV 117 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 SGDG F +V +Q K+V + +++S +L +QAD F L L Sbjct: 118 SGDGDFADVVKVIQDMGKQV----ENSTFQALSSHRLAQQADRFFPLDEL 163 >gi|91776174|ref|YP_545930.1| hypothetical protein Mfla_1822 [Methylobacillus flagellatus KT] gi|91710161|gb|ABE50089.1| protein of unknown function DUF88 [Methylobacillus flagellatus KT] Length = 275 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 35/177 (19%), Positives = 58/177 (32%), Gaps = 27/177 (15%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 ++A+ ID N + F +LL+ V Y Q++ Sbjct: 9 PRLAILIDADNTF------RFINVIDELLEEISKYGDVSIRRIYGDWTETKMQRWK---- 58 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDG 123 + + +++ G K+S D L +DA + + L+ I S D Sbjct: 59 ------EILPKYAIQPIQQYANTKG----KNSTDSALIIDAMDLLYTAPLDGFCIVSSDS 108 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 FT L L+ K+V D L + F+ + L E DP E Sbjct: 109 DFTRLATRLRESGKQVYGFGEQK-----TPDSLIAACNKFIYIEILSKEKLSDPPEP 160 >gi|318040287|ref|ZP_07972243.1| hypothetical protein SCB01_01212 [Synechococcus sp. CB0101] Length = 175 Score = 118 bits (297), Expect = 2e-25, Method: Composition-based stats. Identities = 49/176 (27%), Positives = 83/176 (47%), Gaps = 12/176 (6%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFR--SRAIVIRAYYYTTVVGDPEQQFSPLHP 65 +AL +DG +++ + LG+ D R+LL + A++YT + +Q P Sbjct: 3 LALAVDGHSMFYVQQKLGWFFDPRRLLAYATATPGVEISSAFWYTGLKDPTDQ-----RP 57 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 D L GF V K +E R+ ++++DVE+A+D + + + + SG Sbjct: 58 FRDALTSLGFTVRTKPLREVGGEADQRQFARANLDVEVAIDLLAVAHRTDEVWLLSGSRD 117 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 LV L+ K KV +VST M +LR AD F+DLA L+ ++ + + Sbjct: 118 LERLVEVLRIKGLKVVLVSTD----GMVPRELRNAADRFLDLAELRPQLEKTEHQQ 169 >gi|108762087|ref|YP_628313.1| hypothetical protein MXAN_0030 [Myxococcus xanthus DK 1622] gi|108465967|gb|ABF91152.1| conserved hypothetical protein [Myxococcus xanthus DK 1622] Length = 320 Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 65/183 (35%), Gaps = 25/183 (13%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 + +IALFID NL ++ D + L + V+ Y +S Sbjct: 5 NAEHRIALFIDFENLVTNTGISSASFDLQPSLDRLLEKGKVVFRRAYC--------DWSR 56 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIF 119 LH G +++ + K+ D+ L +DA E E ++ VI Sbjct: 57 FAEAKIRLHEFGVELIDVP-------PSTRAGKNGADMRLVIDALELCYARESIDTFVIG 109 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 SGD F L L+ + V ++ S + D F+ L + +R Sbjct: 110 SGDSDFCPLAYKLRENGRTVIGLA----VKESTSPLFVKACDEFIYL---RPRQSRSDKG 162 Query: 180 DKK 182 DK+ Sbjct: 163 DKE 165 >gi|167589253|ref|ZP_02381641.1| hypothetical protein BuboB_28211 [Burkholderia ubonensis Bu] Length = 280 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 39/180 (21%), Positives = 66/180 (36%), Gaps = 25/180 (13%) Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 A+F D N+ + + D + +L+ + ++ Y + Sbjct: 2 AVFCDFENVALGVRDAKYEKFDIKPVLERLLLKGSIVVKKAYC--------DWDRYKGFK 53 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + ++ VI SGD Sbjct: 54 ASMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGDSD 106 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR--DPDEDKK 182 F+ LV+ L+ KKV V SD L D F+ L E R E ++ Sbjct: 107 FSPLVSKLRENAKKVIGV----GVKQSTSDLLVANCDEFIFYDDLVREQQRALAKREQQR 162 >gi|254524406|ref|ZP_05136461.1| protein containing DUF88 [Stenotrophomonas sp. SKA14] gi|219721997|gb|EED40522.1| protein containing DUF88 [Stenotrophomonas sp. SKA14] Length = 259 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 54/171 (31%), Gaps = 29/171 (16%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M +P ++IAL ID N AS ++L + Y + + Sbjct: 1 MSEPEKRIALLIDADNAPAS--------KIDEVLAEVARYGVANVRRAYGNWKSPRLKGW 52 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118 + + ++F + G K++ D+ + +DA + + L+ I Sbjct: 53 ----------EAVLHEYAIRPIQQFAYSKG----KNASDMAMVIDAMDLLYARNLDGFAI 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 S D FT +V L KV + F L L Sbjct: 99 VSSDADFTPMVMRLLTDGVKVYGFGEKKTPEP-----FVNACSKFTYLEAL 144 >gi|194367375|ref|YP_002029985.1| hypothetical protein Smal_3603 [Stenotrophomonas maltophilia R551-3] gi|194350179|gb|ACF53302.1| protein of unknown function DUF88 [Stenotrophomonas maltophilia R551-3] Length = 259 Score = 118 bits (296), Expect = 3e-25, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 54/171 (31%), Gaps = 29/171 (16%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M +P ++IAL ID N AS ++L + Y + + Sbjct: 1 MSEPEKRIALLIDADNAPAS--------KIDEVLAEVARYGVANVRRAYGNWKSPRLKGW 52 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118 + + ++F + G K++ D+ + +DA + + L+ I Sbjct: 53 ----------EAVLHEYAIRPIQQFAYSKG----KNASDMAMVIDAMDLLYARNLDGFAI 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 S D FT +V L KV + F L L Sbjct: 99 VSSDADFTPMVMRLLTDGVKVYGFGEKKTPEP-----FVNACSKFTYLEAL 144 >gi|34557802|ref|NP_907617.1| hypothetical protein WS1458 [Wolinella succinogenes DSM 1740] gi|34483520|emb|CAE10517.1| conserved hypothetical protein [Wolinella succinogenes] Length = 248 Score = 118 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 30/176 (17%), Positives = 52/176 (29%), Gaps = 29/176 (16%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 +++A+ ID N AS +LL + Y + + Sbjct: 10 KRLAVLIDADNAQASV--------LGELLAEISKYGTLNIKRAYGDWTSSNLKSWKEHLH 61 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDG 123 + ++F G K++ D L +DA + LE + S D Sbjct: 62 ----------KYAIAPIQQFNYTSG----KNATDSALIIDAMDLLHDAPLEGFCLVSSDS 107 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 FT L ++ V + D F+ L+ E R P+ Sbjct: 108 DFTRLATRIRESGLVVYGFGEKK-----TPEAFVAACDKFIYTEILRQEEQRRPES 158 >gi|330943326|gb|EGH45703.1| hypothetical protein PSYPI_26719 [Pseudomonas syringae pv. pisi str. 1704B] Length = 179 Score = 118 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 28/179 (15%), Positives = 54/179 (30%), Gaps = 29/179 (16%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 ++ +A+ ID N A+ L + + Y G + Sbjct: 9 SQKHLAVLIDADNAPAAI--------VEGLFEEIAKYGVASVKRIYGDWTGPQLGGWKK- 59 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSG 121 + ++F G K++ D L +DA + + + + S Sbjct: 60 ---------VLLDYSIQPIQQFAYTKG----KNATDSSLIIDAMDLLYTRRFDGFCLVSS 106 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 D FT L + L+ + V + + D F+ + L+ EI D Sbjct: 107 DSDFTRLASRLREEGLTVYGFGEEKTPKPFVA-----ACDKFIYIELLREEITTPATGD 160 >gi|289677366|ref|ZP_06498256.1| hypothetical protein PsyrpsF_29051 [Pseudomonas syringae pv. syringae FF5] gi|330897316|gb|EGH28735.1| hypothetical protein PSYJA_07026 [Pseudomonas syringae pv. japonica str. M301072PT] gi|330981730|gb|EGH79833.1| hypothetical protein PSYAP_24706 [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 264 Score = 118 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 28/179 (15%), Positives = 54/179 (30%), Gaps = 29/179 (16%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 ++ +A+ ID N A+ L + + Y G + Sbjct: 9 SQKHLAVLIDADNAPAAI--------VEGLFEEIAKYGVASVKRIYGDWTGPQLGGWKK- 59 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSG 121 + ++F G K++ D L +DA + + + + S Sbjct: 60 ---------VLLDYSIQPIQQFAYTKG----KNATDSSLIIDAMDLLYTRRFDGFCLVSS 106 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 D FT L + L+ + V + + D F+ + L+ EI D Sbjct: 107 DSDFTRLASRLREEGLTVYGFGEEKTPKPFVA-----ACDKFIYIELLREEITTPATGD 160 >gi|255065206|ref|ZP_05317061.1| conserved hypothetical protein [Neisseria sicca ATCC 29256] gi|255050627|gb|EET46091.1| conserved hypothetical protein [Neisseria sicca ATCC 29256] Length = 390 Score = 118 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 32/178 (17%), Positives = 52/178 (29%), Gaps = 30/178 (16%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +K+A+ ID N A +LL+ I Y + Sbjct: 6 NKKLAVLIDADNAPADI--------IDRLLEEVAKYGIASVKRIYGDWSHGLSK------ 51 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122 ++F G K++ D+ L +DA + S + I S D Sbjct: 52 -----WKAALLPHAIIPVQQFAYTKG----KNATDMALVIDAMDLLYSGNFDGFCIVSSD 102 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 FT L + L+ V + R+ D F+ + E R E Sbjct: 103 SDFTRLASRLRESGLTVYGFGEKK-----TPEAFRKACDKFIYTEIFRPEKQRQEKEK 155 >gi|66046764|ref|YP_236605.1| hypothetical protein Psyr_3535 [Pseudomonas syringae pv. syringae B728a] gi|63257471|gb|AAY38567.1| conserved hypothetical protein [Pseudomonas syringae pv. syringae B728a] gi|330973591|gb|EGH73657.1| hypothetical protein PSYAR_24186 [Pseudomonas syringae pv. aceris str. M302273PT] Length = 264 Score = 118 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 29/180 (16%), Positives = 55/180 (30%), Gaps = 29/180 (16%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 ++ +A+ ID N A+ L + + Y G + Sbjct: 9 SQKHLAVLIDADNAPAAI--------VEGLFEEIAKYGVASVKRIYGDWTGPQLGGWKK- 59 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSG 121 + ++F G K++ D L +DA + + + + S Sbjct: 60 ---------VLLDYSIQPIQQFAYTKG----KNATDSSLIIDAMDLLYTRRFDGFCLVSS 106 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 D FT L + L+ + V + + D F+ + L+ EIA D Sbjct: 107 DSDFTRLASRLREEGLTVYGFGEEKTPKPFVA-----ACDKFIYIELLREEIAVPASADP 161 >gi|294787818|ref|ZP_06753062.1| conserved hypothetical protein [Simonsiella muelleri ATCC 29453] gi|294484111|gb|EFG31794.1| conserved hypothetical protein [Simonsiella muelleri ATCC 29453] Length = 454 Score = 118 bits (295), Expect = 5e-25, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 54/182 (29%), Gaps = 30/182 (16%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M +K+A+ ID N A ++L+ + Y + Sbjct: 1 MSTSNKKLAVLIDADNAPADI--------IDEMLEEIAKYGVASVKRIYGDWSHGLSK-- 50 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118 ++F G K++ D+ L +DA + S + I Sbjct: 51 ---------WKATLLPHAIIPVQQFAYTKG----KNATDMALVIDAMDLLYSGNFDGFCI 97 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 S D FT L + L+ V + RR D F+ + + E Sbjct: 98 VSSDSDFTRLASRLRESGLTVYGFGEKK-----TPESFRRACDKFVYVEIFRPEKNLPKQ 152 Query: 179 ED 180 ++ Sbjct: 153 KN 154 >gi|57234893|ref|YP_181094.1| hypothetical protein DET0347 [Dehalococcoides ethenogenes 195] gi|57225341|gb|AAW40398.1| conserved hypothetical protein [Dehalococcoides ethenogenes 195] Length = 194 Score = 117 bits (294), Expect = 5e-25, Method: Composition-based stats. Identities = 34/173 (19%), Positives = 67/173 (38%), Gaps = 9/173 (5%) Query: 1 MFDPREKIALFIDGANLYASSKAL--GFDIDYRKLLKAFRSRAIVIRAYYYTT--VVGDP 56 M D E++ +FIDG+N+Y K+ DID+ R ++R YYY + Sbjct: 1 MTDTLERVMIFIDGSNMYHYLKSHFQRTDIDFGCFCSKIAGRRRLVRIYYYNAEVGRKEE 60 Query: 57 EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLE 114 ++F+ + + ++ + +DV L+ D + Sbjct: 61 PERFNDQKKFFSSPEKISYMELRLGRLVYSGWPSTPPYEKGVDVLLSTDMLSHGFKNNFD 120 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 ++ +GD F + + A++ K V + S +LR+ AD + + Sbjct: 121 TAILVAGDSDFVSALQAVKDNGKNVEVALFGK---ETTSMELRKVADKTITID 170 >gi|302188168|ref|ZP_07264841.1| hypothetical protein Psyrps6_17563 [Pseudomonas syringae pv. syringae 642] Length = 264 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 28/178 (15%), Positives = 54/178 (30%), Gaps = 29/178 (16%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 ++ +A+ ID N A+ L + + Y G + Sbjct: 10 QKHLAVLIDADNAPAAI--------VEGLFEEIAKYGVASVKRIYGDWTGPQLGGWKK-- 59 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122 + ++F G K++ D L +DA + + + + S D Sbjct: 60 --------VLLDYSIQPIQQFAYTKG----KNATDSSLIIDAMDLLYTRRFDGFCLVSSD 107 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 FT L + L+ + V + + D F+ + L+ EI D Sbjct: 108 SDFTRLASRLREEGLTVYGFGEEKTPKPFVA-----ACDKFIYIELLREEITTPASGD 160 >gi|317131070|ref|YP_004090384.1| protein of unknown function DUF88 [Ethanoligenens harbinense YUAN-3] gi|315469049|gb|ADU25653.1| protein of unknown function DUF88 [Ethanoligenens harbinense YUAN-3] Length = 255 Score = 117 bits (294), Expect = 6e-25, Method: Composition-based stats. Identities = 26/170 (15%), Positives = 49/170 (28%), Gaps = 29/170 (17%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 ++A+ ID N+ S + +L+ Y + Sbjct: 4 QQDMRLAVLIDAENVPYS--------NVTGMLEEITRYGTPTVKRIYGDWTTQNMSGWKN 55 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFS 120 + +++ G K+S D + +DA + + ++ + S Sbjct: 56 VLVPNA----------IVPVQQYCYTSG----KNSSDSAMIIDAMDILYAGKIDGFCLVS 101 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 D FT L L+ KKV D D F+ L + Sbjct: 102 SDSDFTRLATRLRESGKKVYGFGEKK-----TPDAFIAACDKFIYLEIIA 146 >gi|94500534|ref|ZP_01307065.1| hypothetical protein RED65_15728 [Oceanobacter sp. RED65] gi|94427324|gb|EAT12303.1| hypothetical protein RED65_15728 [Oceanobacter sp. RED65] Length = 157 Score = 117 bits (293), Expect = 7e-25, Method: Composition-based stats. Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 13/165 (7%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 + IA+F D N+Y +++ +Y+ L++ ++ ++++A+ Y G Q Sbjct: 1 MKHIAVFADVQNIYYTTRDRFKRSFNYKALIEQLKNEGVIVQAHAYAIDRGIDSQ----- 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 D L GF V K + + K DV + +D E ++ +E +V+ SGDG Sbjct: 56 IKFQDALRNMGFDVHLKPFIQRRDGSA----KGDWDVGITIDIMEAAKDVEEVVLLSGDG 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F L+ ++ + S V + ++ L + D F D+ Sbjct: 112 DFAILLEHIRDHYQTT---SKVYGVEFLTANGLIKSCDVFRDIDE 153 >gi|258544860|ref|ZP_05705094.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826] gi|258519883|gb|EEV88742.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826] Length = 329 Score = 117 bits (293), Expect = 7e-25, Method: Composition-based stats. Identities = 34/175 (19%), Positives = 54/175 (30%), Gaps = 29/175 (16%) Query: 1 MFDPRE-KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 M + K+A+ ID N AS+ L I Y Q Sbjct: 1 MNPEKPHKLAVLIDADNASASA--------VSGLFAEIAKYGIASVKRIYGDWSRPEPQG 52 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLV 117 + L ++F G K + D+ L +DA E S + Sbjct: 53 WKKDVLLKHA---------LVPVQQFAYTTG----KDATDMCLIIDAMELLYSGIFDGFC 99 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 + S D FT L ++ + V + R+ D F+ L L++E Sbjct: 100 LVSSDSDFTPLANHIRSRGLTVYGFG-----KRNTPEAFRQSCDRFIYLENLQDE 149 >gi|261364990|ref|ZP_05977873.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] gi|288566793|gb|EFC88353.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996] Length = 390 Score = 117 bits (293), Expect = 8e-25, Method: Composition-based stats. Identities = 32/178 (17%), Positives = 52/178 (29%), Gaps = 30/178 (16%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +K+A+ ID N A +LL+ I Y + Sbjct: 6 NKKLAVLIDADNAPADI--------IDRLLEEVAKYGIASVKRIYGDWSHGLSK------ 51 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122 ++F G K++ D+ L +DA + S + I S D Sbjct: 52 -----WKAALLPHAIIPVQQFAYTKG----KNATDMALVIDAMDLLYSGNFDGFCIVSSD 102 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 FT L + L+ V + R+ D F+ + E R E Sbjct: 103 SDFTRLASRLRESGLTVYGFGEKK-----TPEAFRKACDKFIYTEIFRPEKQRQEKEK 155 >gi|46200099|ref|YP_005766.1| hypothetical protein TTC1797 [Thermus thermophilus HB27] gi|55980158|ref|YP_143455.1| hypothetical protein TTHA0189 [Thermus thermophilus HB8] gi|46197727|gb|AAS82139.1| hypothetical conserved protein [Thermus thermophilus HB27] gi|55771571|dbj|BAD70012.1| conserved hypothetical protein [Thermus thermophilus HB8] Length = 181 Score = 117 bits (292), Expect = 9e-25, Method: Composition-based stats. Identities = 40/187 (21%), Positives = 81/187 (43%), Gaps = 17/187 (9%) Query: 5 REKIALFIDGANLYASSKAL---GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 E++A+FIDG+NLY + +++ + + + ++RAYYY + + Sbjct: 1 MERVAIFIDGSNLYKGLVQHLGSDYRLNFVEFITLLTAGRKLLRAYYYNAPLPPEDPAAK 60 Query: 62 PLHPLLDWLHYNGF-QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVI 118 L++L + V + + V+ +D+++AVD + + V+ Sbjct: 61 AHQSFLNYLKRVPYVTVRLGRLERRADGF----VEKGVDIQIAVDMLRLAFVNAYDIAVL 116 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL---KNEIAR 175 SGDG F +V +Q K+V + +++S +L +QAD+F L + Sbjct: 117 VSGDGDFAEVVRVVQDLGKQV----ENTTFHALSSHRLAQQADHFYPLDDFPWERLRAQV 172 Query: 176 DPDEDKK 182 P ++ Sbjct: 173 SPASPEE 179 >gi|218295249|ref|ZP_03496085.1| protein of unknown function DUF88 [Thermus aquaticus Y51MC23] gi|218244452|gb|EED10977.1| protein of unknown function DUF88 [Thermus aquaticus Y51MC23] Length = 180 Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats. Identities = 42/175 (24%), Positives = 86/175 (49%), Gaps = 17/175 (9%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 +IALFIDG+ +Y ++K LG+++D+R+++ F + + A+YY + +++ Sbjct: 2 RIALFIDGSYMYQAAKRLGWNVDHRRVITQFATPEQLYNAFYYVPITDPEDERQQR---F 58 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126 +D L + G+ V +++ + ++ + +A D + + V+ SG G Sbjct: 59 IDALVFMGYTVRSRLVR----------GEARFEAMMATDLLTTAPRWDRAVVASGSGELA 108 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 AL+ K+V ++ +A +LR QAD F++LA + + R P + Sbjct: 109 HAFQALRAMGKEVHLL----GVHELADLELRNQADRFLNLAEWREVLERTPGGRR 159 >gi|317471517|ref|ZP_07930868.1| hypothetical protein HMPREF1011_01216 [Anaerostipes sp. 3_2_56FAA] gi|316901012|gb|EFV22975.1| hypothetical protein HMPREF1011_01216 [Anaerostipes sp. 3_2_56FAA] Length = 351 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 29/182 (15%), Positives = 58/182 (31%), Gaps = 29/182 (15%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M + ++ AL ID N+ S+K + +L + Y + Sbjct: 1 MENKEKRFALLIDADNI--SAKY------IKPILDELSQYGNITYKRIYGDWTSTLHASW 52 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVI 118 ++F+ G K++ D + +DA + + ++ I Sbjct: 53 KEELLANS----------ITPIQQFSYTQG----KNATDSAMIIDAMDILYANRVDGFCI 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 S D FT L + ++ V + + P R+ D F +L L + Sbjct: 99 VSSDSDFTRLASRIRETGLTVIGMGEGKTPP-----AFRKACDVFTNLELLIEDKEEKES 153 Query: 179 ED 180 + Sbjct: 154 KP 155 >gi|320103701|ref|YP_004179292.1| hypothetical protein Isop_2164 [Isosphaera pallida ATCC 43644] gi|319750983|gb|ADV62743.1| hypothetical protein Isop_2164 [Isosphaera pallida ATCC 43644] Length = 294 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 65/180 (36%), Gaps = 24/180 (13%) Query: 3 DPREKIALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + +A+F+D NL + + K+L+ + +I Y ++ Sbjct: 5 EHDRNLAVFVDLENLAMGFQNQKKARFEIHKVLERLVEKGKLIVKKAYA--------DWN 56 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVI 118 H +++ + + K+S D+ L VDA + + ++ VI Sbjct: 57 RYQAYTAPFHEAAIELIEIPRR-------SQTGKNSADIRLVVDAMDLAWSKPHVDTFVI 109 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 SGD F+ LV+ L+ K V + S+ LR D F+ L +D Sbjct: 110 VSGDSDFSPLVSKLKENGKHVIGL----GMKGSTSELLRDNCDEFIYYEDL-ERQEQDEQ 164 >gi|17232331|ref|NP_488879.1| hypothetical protein alr4839 [Nostoc sp. PCC 7120] gi|17133976|dbj|BAB76538.1| alr4839 [Nostoc sp. PCC 7120] Length = 157 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 44/165 (26%), Positives = 84/165 (50%), Gaps = 13/165 (7%) Query: 17 LYASSKALGFDIDYRKLLKAFRSRA---IVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYN 73 ++ + + G+ D R++L+ F++ +I A++YT + D L Sbjct: 1 MFYAQQKNGWFFDPRRVLEYFKNEQSETTLINAFWYTGLKDP-----QDQRGFRDALISL 55 Query: 74 GFQVVAKVAKEFTE-NCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAAL 132 G+ V K+ KE+ + + GR K+++D+E+ VD F + + +V+FSGDG F + L Sbjct: 56 GYTVRTKILKEYCDDSSGRYSQKANLDIEIVVDMFNTVDQYDRVVLFSGDGDFERAIELL 115 Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 + K +T+VST M + +LR D ++DL +++ I + Sbjct: 116 RSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDRIEKAE 156 >gi|219850544|ref|YP_002464977.1| hypothetical protein Cagg_3705 [Chloroflexus aggregans DSM 9485] gi|219544803|gb|ACL26541.1| protein of unknown function DUF88 [Chloroflexus aggregans DSM 9485] Length = 600 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 42/184 (22%), Positives = 77/184 (41%), Gaps = 22/184 (11%) Query: 1 MFD-PREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58 M+D R +A+FID N+Y S + L ++ ++ V+ + Y Sbjct: 1 MYDQKRPDVAVFIDFENIYVSVRDKLNATPNFEAIMDRCNDLGRVVISRAYA-------- 52 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRV--KSSMDVELAVDAFEQS---EGL 113 + + L+ N + + + ++ GR K+S+D+ L +DA + + Sbjct: 53 DWYRYPRITSALYANAIEPIYVATYYYDKDAGRTGRAIKNSVDMNLCIDAMKTLYTNPNI 112 Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 V+ +GD F LV ++++ K+V I+ AS L + AD F+ L I Sbjct: 113 SRFVLVTGDRDFIPLVHSIRQHGKEVYIIGIG----GAASTHLAQSADEFVFYEQL---I 165 Query: 174 ARDP 177 R P Sbjct: 166 GRQP 169 >gi|329906041|ref|ZP_08274342.1| hypothetical protein IMCC9480_2751 [Oxalobacteraceae bacterium IMCC9480] gi|327547373|gb|EGF32203.1| hypothetical protein IMCC9480_2751 [Oxalobacteraceae bacterium IMCC9480] Length = 284 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 37/169 (21%), Positives = 63/169 (37%), Gaps = 23/169 (13%) Query: 9 ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 ALF D N+ + + D RK+L+ + ++ Y + Sbjct: 11 ALFCDFENVALGVRDAKYAAFDIRKVLERLLLKGNIVVKKAYC--------DWDRYKDFK 62 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ + VDA + ++ VI SGD Sbjct: 63 AAMHEAAFELIEIPHV-------RQSGKNSADIRMVVDALDLCYTKAHVDTFVILSGDSD 115 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 F+ LV+ L+ K+V V SD L D F+ L + Sbjct: 116 FSPLVSKLRENNKRVIGV----GVKDSTSDLLSANCDEFIFYDDLVQVV 160 >gi|257094155|ref|YP_003167796.1| hypothetical protein CAP2UW1_2580 [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046679|gb|ACV35867.1| conserved hypothetical protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 311 Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats. Identities = 24/171 (14%), Positives = 50/171 (29%), Gaps = 29/171 (16%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 +P +++A+ ID N + LL+ Y + Sbjct: 53 EPTKRLAVLIDADNAQPAV--------IEALLEEIARFGEATVRRIYGDFTSPTSSSWKK 104 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 + K ++F G K++ D + +DA + + + + + Sbjct: 105 FLN----------KHSIKPIQQFAYTTG----KNATDSTMIIDAMDLLYTRRFDGFCLVT 150 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 D FT L L+ + +V + R F+ L+ Sbjct: 151 SDSDFTGLAVRLREEGLQVFGFGEQKTPEP-----FRNACHKFIFTEVLRK 196 >gi|222526169|ref|YP_002570640.1| hypothetical protein Chy400_2928 [Chloroflexus sp. Y-400-fl] gi|222450048|gb|ACM54314.1| protein of unknown function DUF88 [Chloroflexus sp. Y-400-fl] Length = 652 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 42/184 (22%), Positives = 77/184 (41%), Gaps = 22/184 (11%) Query: 1 MFD-PREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58 M+D R +A+FID N+Y S + L ++ ++ V+ + Y Sbjct: 1 MYDQKRPDVAVFIDFENIYVSVRDKLNATPNFEAIMDRCNDLGRVVISRAYA-------- 52 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRV--KSSMDVELAVDAFEQS---EGL 113 + + L+ N + + + ++ GR K+S+D+ L +DA + + Sbjct: 53 DWYRYPRITSALYANAIEPIYVATYYYDKDAGRTGRAIKNSVDMNLCIDAMKTLYTNPNV 112 Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 V+ +GD F LV ++++ K+V I+ AS L + AD F+ L I Sbjct: 113 ARFVLVTGDRDFIPLVHSIRQHGKEVYIIGIG----GAASTHLAQSADEFVFYEQL---I 165 Query: 174 ARDP 177 R P Sbjct: 166 GRQP 169 >gi|163848259|ref|YP_001636303.1| hypothetical protein Caur_2709 [Chloroflexus aurantiacus J-10-fl] gi|163669548|gb|ABY35914.1| protein of unknown function DUF88 [Chloroflexus aurantiacus J-10-fl] Length = 669 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 42/184 (22%), Positives = 77/184 (41%), Gaps = 22/184 (11%) Query: 1 MFD-PREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58 M+D R +A+FID N+Y S + L ++ ++ V+ + Y Sbjct: 18 MYDQKRPDVAVFIDFENIYVSVRDKLNATPNFEAIMDRCNDLGRVVISRAYA-------- 69 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRV--KSSMDVELAVDAFEQS---EGL 113 + + L+ N + + + ++ GR K+S+D+ L +DA + + Sbjct: 70 DWYRYPRITSALYANAIEPIYVATYYYDKDAGRTGRAIKNSVDMNLCIDAMKTLYTNPNV 129 Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 V+ +GD F LV ++++ K+V I+ AS L + AD F+ L I Sbjct: 130 ARFVLVTGDRDFIPLVHSIRQHGKEVYIIGIG----GAASTHLAQSADEFVFYEQL---I 182 Query: 174 ARDP 177 R P Sbjct: 183 GRQP 186 >gi|303232840|ref|ZP_07319524.1| conserved hypothetical protein [Atopobium vaginae PB189-T1-4] gi|302481030|gb|EFL44106.1| conserved hypothetical protein [Atopobium vaginae PB189-T1-4] Length = 260 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 39/193 (20%), Positives = 66/193 (34%), Gaps = 32/193 (16%) Query: 1 MFD-PREKIALFIDGANLYASS---------KALGFDIDYRKLLKAFRSRAIVIRAYYYT 50 M D P+ +A+FID N + + D + + + + Y Sbjct: 1 MNDIPQRSLAVFIDYENFAYGAAGAAHKRTSRTHRKTPDMKSVFGRLVDKGRITVKRAYC 60 Query: 51 TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110 + + LH G +++ + K+S D+ LAVDA E Sbjct: 61 --------DWQRFKQDITPLHELGIELIEIPDR-------SSTGKNSADIRLAVDATEMC 105 Query: 111 ---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 E ++ I SGD F+ LVA L+ K V + + S L D F+ Sbjct: 106 LTKEHIDTFAILSGDSDFSPLVAKLKEFGKTVIGI----GAEPITSSLLVEVCDEFIFYE 161 Query: 168 YLKNEIARDPDED 180 + + +D Sbjct: 162 DIVAQAGIPEFKD 174 >gi|254236844|ref|ZP_04930167.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|126168775|gb|EAZ54286.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] Length = 164 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 30/148 (20%), Positives = 57/148 (38%), Gaps = 14/148 (9%) Query: 21 SKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAK 80 ++ ++Y L ++ AY Y GDP L GF V K Sbjct: 23 ARPTAAHLNYAALWADIARGGSIVEAYAYAIDRGDP-----RQQQFQQILRNLGFTVKLK 77 Query: 81 VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAA-LQRKVKKV 139 + + K DV + +D + + ++ +V+ SGDG F L+ ++ Sbjct: 78 PYIQRADGSA----KGDWDVGITIDVLDAAPRVDEVVLLSGDGDFDLLLEKVIRAHG--- 130 Query: 140 TIVSTVLSDPSMASDQLRRQADYFMDLA 167 +V+T P + ++ L R A ++ + Sbjct: 131 -VVATAYGVPGLTANALIRAASRYVPIE 157 >gi|294670344|ref|ZP_06735227.1| hypothetical protein NEIELOOT_02063 [Neisseria elongata subsp. glycolytica ATCC 29315] gi|291307948|gb|EFE49191.1| hypothetical protein NEIELOOT_02063 [Neisseria elongata subsp. glycolytica ATCC 29315] Length = 399 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 32/178 (17%), Positives = 52/178 (29%), Gaps = 30/178 (16%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +K+A+ ID N A +LL+ I Y + Sbjct: 6 NKKLAVLIDADNAPADI--------IDRLLEEIAKYGIASVKRIYGDWSHGLSK------ 51 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122 ++F G K++ D+ L +DA + S + I S D Sbjct: 52 -----WKAALLPHAIIPVQQFAYTKG----KNATDMALVIDAMDLLYSGNFDGFCIVSSD 102 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 FT L + L+ V + R+ D F+ + E R E Sbjct: 103 SDFTRLASRLRESGLTVYGFGEKK-----TPEAFRKACDKFVYTEIFRPEKQRQEKEK 155 >gi|238059538|ref|ZP_04604247.1| hypothetical protein MCAG_00504 [Micromonospora sp. ATCC 39149] gi|237881349|gb|EEP70177.1| hypothetical protein MCAG_00504 [Micromonospora sp. ATCC 39149] Length = 367 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 41/174 (23%), Positives = 66/174 (37%), Gaps = 23/174 (13%) Query: 3 DPREKIALFIDGANLYASSKAL--GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 D ++IALF+D NL ++ G D R + A R V+ Y + Sbjct: 5 DHEDRIALFLDYENLALGAREHLGGMAFDLRPIADALAERGRVVVRRAYA--------DW 56 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLV 117 S L + +++ + K++ D+++AVDA E + + V Sbjct: 57 SFFDEDRRMLTRSHVELIEMPQRM------GASRKNAADIKMAVDAVELAFERAYVSTFV 110 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 I +GD FT LV L+ K+V V S L D F+ L+ Sbjct: 111 ICTGDSDFTPLVHKLRELNKRVIGV----GVEKSTSALLPPACDEFLYYDRLEG 160 >gi|167746693|ref|ZP_02418820.1| hypothetical protein ANACAC_01404 [Anaerostipes caccae DSM 14662] gi|167653653|gb|EDR97782.1| hypothetical protein ANACAC_01404 [Anaerostipes caccae DSM 14662] Length = 351 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 29/182 (15%), Positives = 58/182 (31%), Gaps = 29/182 (15%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M + ++ AL ID N+ S+K + +L + Y + Sbjct: 1 MENKEKRFALLIDADNI--SAKY------IKPILDELSQYGNITYKRIYGDWTSTLHASW 52 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVI 118 ++F+ G K++ D + +DA + + ++ I Sbjct: 53 KEELLANS----------ITPIQQFSYTQG----KNATDSAMIIDAMDILYTNRVDGFCI 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 S D FT L + ++ V + + P R+ D F +L L + Sbjct: 99 VSSDSDFTRLASRIRETGLTVIGMGEGKTPP-----AFRKACDVFTNLELLIEDKEEKES 153 Query: 179 ED 180 + Sbjct: 154 KP 155 >gi|320449117|ref|YP_004201213.1| hypothetical protein TSC_c00110 [Thermus scotoductus SA-01] gi|320149286|gb|ADW20664.1| hypothetical protein TSC_c00110 [Thermus scotoductus SA-01] Length = 181 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 40/183 (21%), Positives = 80/183 (43%), Gaps = 14/183 (7%) Query: 5 REKIALFIDGANLYASS---KALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 E++A+FIDG+NLY + +++ + + + ++RAYYY + + Sbjct: 1 MERVAIFIDGSNLYKGLVQHLGPDYRLNFVEFISLLTAGRRLLRAYYYNAPLPPEDPAAK 60 Query: 62 PLHPLLDWLHYNGFQ-VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVI 118 L++L + V + + V+ +D+++A+D + + + V+ Sbjct: 61 AHQSFLNYLKRVPYVAVRLGRLERRADGF----VEKGVDIQIAIDILRLAYADAYDVAVL 116 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 SGDG F +V +Q K+V + +++S +L +QAD F L E R Sbjct: 117 VSGDGDFAEVVKVVQDMGKQV----ENTTFHALSSHRLAQQADRFYPLDDFPWERLRAQS 172 Query: 179 EDK 181 + Sbjct: 173 LPQ 175 >gi|225165594|ref|ZP_03727408.1| protein of unknown function DUF88 [Opitutaceae bacterium TAV2] gi|224800165|gb|EEG18581.1| protein of unknown function DUF88 [Opitutaceae bacterium TAV2] Length = 265 Score = 115 bits (288), Expect = 2e-24, Method: Composition-based stats. Identities = 35/166 (21%), Positives = 62/166 (37%), Gaps = 23/166 (13%) Query: 8 IALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 +A+F+D N+ ++ F D K+ + + ++ Y F Sbjct: 10 LAVFLDLENIARGAQDARFPQFDIGKVFERLLIKGNIVVKKAYC--------DFERYKDF 61 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDG 123 LH F+++ R+ K+S D+ + VDA + + ++ I SGD Sbjct: 62 KRPLHEAAFELIEIPHV-------RQSGKNSADIRMVVDALDLCYTNDHVDAFAIISGDS 114 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 F+ LV+ L+ K V V + SD D F+ L Sbjct: 115 DFSPLVSKLRENGKTVIGV----GVKNSTSDLFIANCDEFIYYDDL 156 >gi|150008736|ref|YP_001303479.1| hypothetical protein BDI_2126 [Parabacteroides distasonis ATCC 8503] gi|149937160|gb|ABR43857.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503] Length = 240 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 27/176 (15%), Positives = 57/176 (32%), Gaps = 29/176 (16%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M +K+A+ ID N+ + + + +L+ I+ Y + Sbjct: 1 MNSKEQKLAVLIDADNVPYA--------NIKGMLEEIAKYGILTIKRIYGDWTKPTVAGW 52 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVI 118 ++++ G K++ D + +DA + ++ ++ I Sbjct: 53 KS----------ILLDYAITPIQQYSYTTG----KNATDSAMIIDAMDILHTDKVDGFCI 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 S D FT L L+ K V + + D F+ + L +I Sbjct: 99 VSSDSDFTRLAVRLRESGKFVLGMGEKKTPNP-----FIVSCDKFVYIEILGGDIK 149 >gi|119714385|ref|YP_921350.1| hypothetical protein Noca_0118 [Nocardioides sp. JS614] gi|119535046|gb|ABL79663.1| protein of unknown function DUF88 [Nocardioides sp. JS614] Length = 286 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 36/174 (20%), Positives = 58/174 (33%), Gaps = 30/174 (17%) Query: 1 MFDPRE-KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 M +P + ++A+ ID N+ AS A LL + Y Sbjct: 1 MTEPADVRLAVLIDADNVSASHAA--------DLLAELARYGVPTVKRAYGDWTTQQLAG 52 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLV 117 + + + ++F G K+S D L +DA + S L+ Sbjct: 53 WKSELA----------RHAIQPIQQFANTVG----KNSTDSALIIDAMDLLYSGHLDAFA 98 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 I S D FT L L+ K V + L+ D F+ L L++ Sbjct: 99 IVSSDSDFTRLATRLRESGKTVYGLG-----RRRTPASLQAACDKFIFLEVLRD 147 >gi|255536314|ref|YP_003096685.1| Maebl [Flavobacteriaceae bacterium 3519-10] gi|255342510|gb|ACU08623.1| Maebl [Flavobacteriaceae bacterium 3519-10] Length = 246 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 60/189 (31%), Gaps = 36/189 (19%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M D +K+A+ ID N+ + + ++L+ Y + Sbjct: 1 MTD--DKLAVLIDADNVPYA--------NVTQMLEEISRYGTPTIKRIYADWTKPTVSGW 50 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVI 118 + ++++ G K+S D L +DA + SE + I Sbjct: 51 K----------GVLLENAITPIQQYSYTTG----KNSSDSALIIDAMDILYSEKVTGFCI 96 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN-----EI 173 S D FT L L+ V + S D F+ L LKN + Sbjct: 97 VSSDSDFTRLATRLREAGMTVIGFGEKKTPKPFIS-----ACDKFIYLEILKNTATETAV 151 Query: 174 ARDPDEDKK 182 + + K+ Sbjct: 152 EKKTAKPKR 160 >gi|302867482|ref|YP_003836119.1| hypothetical protein Micau_3012 [Micromonospora aurantiaca ATCC 27029] gi|315506110|ref|YP_004084997.1| hypothetical protein ML5_5375 [Micromonospora sp. L5] gi|302570341|gb|ADL46543.1| protein of unknown function DUF88 [Micromonospora aurantiaca ATCC 27029] gi|315412729|gb|ADU10846.1| protein of unknown function DUF88 [Micromonospora sp. L5] Length = 356 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 42/186 (22%), Positives = 70/186 (37%), Gaps = 24/186 (12%) Query: 2 FDPREKIALFIDGANLYASSKAL--GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 D ++IALF+D NL + G D+R + A R V+ Y Sbjct: 1 MDHEDRIALFLDYENLALGVRDHHGGRPFDFRPIADALAERGRVVVRRAYA--------D 52 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHL 116 +S L + +++ + K++ D+++AVDA E + + Sbjct: 53 WSYFDEDRRMLTRSHVELIEIPQRM------GASRKNAADIKMAVDAVELAFERGYISTF 106 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 VI +GD FT LV L+ K+V V S L D F+ L+ + Sbjct: 107 VICTGDSDFTPLVHKLRELNKRVIGV----GVEKSTSALLPPACDEFLYYDRLEG-VDVP 161 Query: 177 PDEDKK 182 P ++ Sbjct: 162 PPAARR 167 >gi|190576025|ref|YP_001973870.1| hypothetical protein Smlt4196 [Stenotrophomonas maltophilia K279a] gi|190013947|emb|CAQ47587.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a] Length = 259 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 53/171 (30%), Gaps = 29/171 (16%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M +P ++IAL ID N AS ++L + Y + + Sbjct: 1 MSEPEKRIALLIDADNAPAS--------KIDEVLAEVARYGVANVRRAYGNWKSPRLKGW 52 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118 + + ++F + G K++ + + +DA + + L+ I Sbjct: 53 ----------EAVLHEYAIRPIQQFAYSKG----KNASAMAMVIDAMDLLYARNLDGFAI 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 S D FT +V L KV + F L L Sbjct: 99 VSSDADFTPMVMRLLTDGVKVYGFGEKKTPEP-----FVNACSKFTYLEAL 144 >gi|328952819|ref|YP_004370153.1| Domain of unknown function DUF88 [Desulfobacca acetoxidans DSM 11109] gi|328453143|gb|AEB08972.1| Domain of unknown function DUF88 [Desulfobacca acetoxidans DSM 11109] Length = 297 Score = 115 bits (288), Expect = 3e-24, Method: Composition-based stats. Identities = 40/164 (24%), Positives = 79/164 (48%), Gaps = 12/164 (7%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRS-RAIVIRAYYYTTVVGDP---EQQF 60 KI +++D N+ + G+ + Y L + ++R Y + + + + Sbjct: 28 MSKIGVYVDSMNI---VRNGGYGMRYEVLRRFATRNGGQIVRLNAYVALDEERVGADPNY 84 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 + + L GF+V+ K + FT+ GR K++ D+++A+D QS+ L+ +++ + Sbjct: 85 NATLNFISTLRDLGFKVIEKPIRWFTDESGRTYGKANADMDMALDIISQSDRLDMVLLLT 144 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 GDG F +V +Q K +V +V+ S LRR+ D F+ Sbjct: 145 GDGDFCNVVTMVQNKGCRVELVAFA-----NVSSWLRREVDLFV 183 >gi|327404779|ref|YP_004345617.1| hypothetical protein Fluta_2799 [Fluviicola taffensis DSM 16823] gi|327320287|gb|AEA44779.1| hypothetical protein Fluta_2799 [Fluviicola taffensis DSM 16823] Length = 250 Score = 115 bits (287), Expect = 4e-24, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 60/181 (33%), Gaps = 29/181 (16%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +K+A+ ID N+ SS +++L+ Y + Sbjct: 2 NEQKMAVLIDADNVPYSS--------IKEMLEEVAKTGTPTIKRIYADWTKPNANGWK-- 51 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSG 121 + ++++ G K+S D L +DA + S+ ++ I S Sbjct: 52 --------GVLLENAITPIQQYSYTSG----KNSSDSALIIDAMDILYSQQVDGFCIVSS 99 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 D FT L L+ KKV + + D F+ + LK + E K Sbjct: 100 DSDFTRLATRLRESGKKVMGIGEKKTPLP-----FITACDKFVYIEILKPKPIPSKTETK 154 Query: 182 K 182 + Sbjct: 155 Q 155 >gi|197123307|ref|YP_002135258.1| hypothetical protein AnaeK_2905 [Anaeromyxobacter sp. K] gi|196173156|gb|ACG74129.1| protein of unknown function DUF88 [Anaeromyxobacter sp. K] Length = 253 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 36/168 (21%), Positives = 59/168 (35%), Gaps = 22/168 (13%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 ++IALFID NL + D + L + V+ Y ++ Sbjct: 4 EHSDQRIALFIDFENLVTRTGLSAETFDLQPALDTLLEKGKVVYRRAYA--------DWT 55 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVI 118 LH G ++V + K+ D+ L +DA E + E ++ VI Sbjct: 56 RFSAATPRLHEKGVELVDVP-------PSTRAGKNGADMRLVIDALELAYLREHIDTFVI 108 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 SGD F L L+ + V ++ S + D F+ L Sbjct: 109 ASGDSDFCPLAYKLRENDRTVIGMA----VREATSPLFVKACDEFIYL 152 >gi|317407351|gb|EFV87317.1| hypothetical protein HMPREF0005_05421 [Achromobacter xylosoxidans C54] Length = 170 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 41/177 (23%), Positives = 64/177 (36%), Gaps = 23/177 (12%) Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 ALF D N+ + + D R +L+ + ++ Y + Sbjct: 11 ALFCDFENVALGVRDTKYQKFDIRPVLERLLLKGSIVVKKAYC--------DWERYKEFK 62 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ L VDA + + VI SGD Sbjct: 63 APMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDFCYTKSHVNTFVIISGDSD 115 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 F+ LV+ L+ KKV V SD L D F+ L E R D + Sbjct: 116 FSPLVSKLRENDKKVIGV----GVKQSTSDLLIANCDEFIFYDDLAREGQRAADARR 168 >gi|114778764|ref|ZP_01453574.1| hypothetical protein SPV1_03033 [Mariprofundus ferrooxydans PV-1] gi|114551015|gb|EAU53578.1| hypothetical protein SPV1_03033 [Mariprofundus ferrooxydans PV-1] Length = 277 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 35/171 (20%), Positives = 65/171 (38%), Gaps = 23/171 (13%) Query: 9 ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 AL+ D N+ + + D D +++L+ + ++ Y ++ Sbjct: 11 ALYCDFENVALGVRDIKLDAFDIQRVLERLLLKGNIVVKKAYC--------DWARYKDFK 62 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ + VDA + ++ VI SGD Sbjct: 63 APMHEAAFELIEIPHV-------RQSGKNSADIRMVVDALDLCYTKAHVDTFVIISGDSD 115 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 F+ LV+ L+ K V V SD L D F+ L + + Sbjct: 116 FSPLVSKLRENNKLVIGV----GVKQSTSDLLIANCDEFIYYDDLVRDSEK 162 >gi|220918096|ref|YP_002493400.1| protein of unknown function DUF88 [Anaeromyxobacter dehalogenans 2CP-1] gi|219955950|gb|ACL66334.1| protein of unknown function DUF88 [Anaeromyxobacter dehalogenans 2CP-1] Length = 253 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 36/168 (21%), Positives = 59/168 (35%), Gaps = 22/168 (13%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 ++IALFID NL + D + L + V+ Y ++ Sbjct: 4 EHSDQRIALFIDFENLVTRTGLSAETFDLQPALDTLLEKGKVVYRRAYA--------DWT 55 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVI 118 LH G ++V + K+ D+ L +DA E + E ++ VI Sbjct: 56 RFSAATPRLHEKGVELVDVP-------PSTRAGKNGADMRLVIDALELAYLREHIDTFVI 108 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 SGD F L L+ + V ++ S + D F+ L Sbjct: 109 ASGDSDFCPLAYKLRENDRTVIGMA----VREATSPLFVKACDEFIYL 152 >gi|313679213|ref|YP_004056952.1| hypothetical protein Ocepr_0319 [Oceanithermus profundus DSM 14977] gi|313151928|gb|ADR35779.1| protein of unknown function DUF88 [Oceanithermus profundus DSM 14977] Length = 173 Score = 114 bits (286), Expect = 4e-24, Method: Composition-based stats. Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 12/169 (7%) Query: 5 REKIALFIDGANLYA---SSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 E++A+FIDG+NLY S+ + +D+ K ++ + ++RAYYY + + Sbjct: 1 MERVAIFIDGSNLYKGLVSTLGSEYRLDFVKFIETLVAGRKLLRAYYYNAPLPTEDAASR 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIF 119 L++L + V E G V+ +D+++AVD + + V+ Sbjct: 61 AHQSFLNYLKRVPYVSVRLGRLERR---GDTFVEKGVDIQIAVDMLRLAYARAYDVGVLV 117 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 SGDG F +V +Q +V + +++S +L +QAD F L Sbjct: 118 SGDGDFAEVVRVIQDMGMQVENATFH----ALSSYRLAQQADRFYPLDE 162 >gi|262189634|ref|ZP_06048020.1| hypothetical protein VIH_000054 [Vibrio cholerae CT 5369-93] gi|262034486|gb|EEY52840.1| hypothetical protein VIH_000054 [Vibrio cholerae CT 5369-93] Length = 145 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 15/154 (9%) Query: 17 LYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGF 75 +Y + + G DY + V++A Y DP+Q L G Sbjct: 1 MYYTCREQYGRHFDYNQFWSQVTQNRTVVKANAYAIASKDPQQ-----RQFHHILRGIGL 55 Query: 76 QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAAL-QR 134 +V+ K + ++ K DV +A+D +E ++ ++ +V+ SGDG F LV + QR Sbjct: 56 EVMLKPFIQRSDGSA----KGDWDVGIALDGYELAQEVDTVVLVSGDGDFEPLVTRIAQR 111 Query: 135 KVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 KV + P + + L A F + + Sbjct: 112 FQVKVEV----YGVPKLTAQHLIDVASQFHPIEH 141 >gi|195953568|ref|YP_002121858.1| protein of unknown function DUF88 [Hydrogenobaculum sp. Y04AAS1] gi|195933180|gb|ACG57880.1| protein of unknown function DUF88 [Hydrogenobaculum sp. Y04AAS1] Length = 176 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 48/184 (26%), Positives = 84/184 (45%), Gaps = 15/184 (8%) Query: 1 MFDPREK--IALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M P + +FIDG NLY K L F +D KL++ F + + ++Y + E Sbjct: 2 MLVPNSRKIAGIFIDGTNLYFVQKQFLDFKVDILKLVRYFANYFAIYNTFFYLAYKEEEE 61 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLV 117 +Q L + G V+ K K+ + +K ++DV+LA+D + + + Sbjct: 62 KQNKFYRMLT----FGGVTVIKKAVKQLKDGS----MKGNLDVDLAMDCLLTKDNYDVAI 113 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 + +GD F L+ L+ K++ +VST S +S +L D F++L L I + Sbjct: 114 LVTGDSDFEKLINILRTFGKQIIVVSTKDS----SSIELVNICDLFVELKDLAPFIKLEE 169 Query: 178 DEDK 181 E + Sbjct: 170 HEKQ 173 >gi|218245522|ref|YP_002370893.1| hypothetical protein PCC8801_0650 [Cyanothece sp. PCC 8801] gi|257058559|ref|YP_003136447.1| hypothetical protein Cyan8802_0670 [Cyanothece sp. PCC 8802] gi|218166000|gb|ACK64737.1| protein of unknown function DUF88 [Cyanothece sp. PCC 8801] gi|256588725|gb|ACU99611.1| protein of unknown function DUF88 [Cyanothece sp. PCC 8802] Length = 234 Score = 114 bits (286), Expect = 5e-24, Method: Composition-based stats. Identities = 26/175 (14%), Positives = 51/175 (29%), Gaps = 28/175 (16%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 +++A+ ID N+ AS LL+ Y + + Sbjct: 6 LSSNKRLAVLIDADNVSASV--------IEALLQEIAKYGTANVKRIYGDWTSNQLNSWK 57 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIF 119 + + ++F G K+S D L +DA + + + + Sbjct: 58 NQLN----------KFAIQPMQQFKYTMG----KNSTDSALIIDAMDLLYTGNFDGFCLV 103 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 S D FT L + ++ V + F+ L+N+ Sbjct: 104 SSDSDFTRLASRIRESGLIVYGFGE----KQKTPSAFVVACNKFIYTDILENQQT 154 >gi|224371038|ref|YP_002605202.1| hypothetical protein HRM2_39800 [Desulfobacterium autotrophicum HRM2] gi|223693755|gb|ACN17038.1| hypothetical protein HRM2_39800 [Desulfobacterium autotrophicum HRM2] Length = 236 Score = 114 bits (285), Expect = 5e-24, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 58/182 (31%), Gaps = 29/182 (15%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M + +KIALFID N AS + +L +V Y + + Sbjct: 1 MNESTQKIALFIDADNAPAS--------KFEDVLSEVAKYGVVTIRKAYGNWKNPCLKSW 52 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVI 118 + + +++ G K++ D+ L +DA + ++ ++ + Sbjct: 53 ----------EELLHEYAIQPIQQYDLTKG----KNASDIALVIDAMDVMYTKNIDVMCF 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 S D FT +V + K V + F+ L + P Sbjct: 99 VSSDCDFTPMVTRALAEGKVVLGFGERKAPSP-----FVNACSKFLFLDQEPEQNGTTPK 153 Query: 179 ED 180 + Sbjct: 154 KT 155 >gi|73748197|ref|YP_307436.1| hypothetical protein cbdb_A289 [Dehalococcoides sp. CBDB1] gi|147668972|ref|YP_001213790.1| hypothetical protein DehaBAV1_0326 [Dehalococcoides sp. BAV1] gi|289432247|ref|YP_003462120.1| hypothetical protein DehalGT_0297 [Dehalococcoides sp. GT] gi|73659913|emb|CAI82520.1| conserved hypothetical protein [Dehalococcoides sp. CBDB1] gi|146269920|gb|ABQ16912.1| protein of unknown function DUF88 [Dehalococcoides sp. BAV1] gi|288945967|gb|ADC73664.1| protein of unknown function DUF88 [Dehalococcoides sp. GT] Length = 194 Score = 114 bits (285), Expect = 6e-24, Method: Composition-based stats. Identities = 34/173 (19%), Positives = 67/173 (38%), Gaps = 9/173 (5%) Query: 1 MFDPREKIALFIDGANLYASSKAL--GFDIDYRKLLKAFRSRAIVIRAYYYTT--VVGDP 56 M D E++ +FIDG+N+Y K+ DID+ ++R YYY + Sbjct: 1 MTDTLERVMIFIDGSNMYHYLKSHFQRTDIDFGCFCSKIAGHRRLVRIYYYNAEVGRKEE 60 Query: 57 EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLE 114 ++F+ L + + ++ + +DV L+ D + Sbjct: 61 PERFNDQKKFFTSLEKIPYMELRLGRLVYSGWPATPPYEKGVDVLLSTDMLSHGFKNNFD 120 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 ++ +GD F + + A++ K V + S +LR+ AD + + Sbjct: 121 TAILVAGDSDFVSALQAVKDNGKNVEVALFGK---ESTSVELRKVADKIIAVD 170 >gi|308233771|ref|ZP_07664508.1| hypothetical protein AvagD15_01897 [Atopobium vaginae DSM 15829] gi|328943670|ref|ZP_08241135.1| hypothetical protein HMPREF0091_10360 [Atopobium vaginae DSM 15829] gi|327491639|gb|EGF23413.1| hypothetical protein HMPREF0091_10360 [Atopobium vaginae DSM 15829] Length = 260 Score = 114 bits (285), Expect = 6e-24, Method: Composition-based stats. Identities = 39/193 (20%), Positives = 69/193 (35%), Gaps = 32/193 (16%) Query: 1 MFDPREK-IALFIDGANLYASSKAL---------GFDIDYRKLLKAFRSRAIVIRAYYYT 50 M D ++ IA+FID N A + A + + + + + Y Sbjct: 1 MSDINQRSIAVFIDYENFAAGAGASKNKASAHGKRTQPNMKCVFSRLVDKGRITLKRAYC 60 Query: 51 TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110 + + LH G +++ + K+S D+ LAVDA E Sbjct: 61 --------DWQRFKQDVTPLHELGIELIEIPDR-------SSTGKNSADIRLAVDATEMC 105 Query: 111 ---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 + ++ VI SGD F+ LV+ L+ K V + + S L D F+ Sbjct: 106 LTKDHIDTFVILSGDSDFSPLVSKLKEFGKTVIGI----GAKPITSSLLVEVCDEFIFYE 161 Query: 168 YLKNEIARDPDED 180 + ++ +D Sbjct: 162 DILSQAGIPEFKD 174 >gi|110637857|ref|YP_678064.1| hypothetical protein CHU_1453 [Cytophaga hutchinsonii ATCC 33406] gi|110280538|gb|ABG58724.1| conserved hypothetical protein [Cytophaga hutchinsonii ATCC 33406] Length = 258 Score = 114 bits (285), Expect = 6e-24, Method: Composition-based stats. Identities = 32/187 (17%), Positives = 58/187 (31%), Gaps = 35/187 (18%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +K+A+ ID N+ S + +++L+ Y + Sbjct: 14 KEDKLAVLIDADNVPYS--------NVKEMLEEISKNGTPTIKRIYADWTKPTVSGWKS- 64 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSG 121 + ++++ G K+S D L +DA + S + I S Sbjct: 65 ---------VLLENAITPIQQYSYTTG----KNSSDSALIIDAMDILYSGKVNGFCIVSS 111 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK------NEIAR 175 D FT L L+ V + S D F+ + LK I + Sbjct: 112 DSDFTRLATRLREAGMTVIGFGEKKTPKPFIS-----ACDKFIYIEILKASSVETKVITK 166 Query: 176 DPDEDKK 182 ++ KK Sbjct: 167 PDEKLKK 173 >gi|254225637|ref|ZP_04919245.1| protein of unknown function [Vibrio cholerae V51] gi|125621852|gb|EAZ50178.1| protein of unknown function [Vibrio cholerae V51] Length = 259 Score = 114 bits (285), Expect = 6e-24, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 56/172 (32%), Gaps = 29/172 (16%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 + +KIA+ ID N + +LK ++ Y D + + Sbjct: 5 NSEKKIAVLIDAENAQYAVLDY--------VLKELSKHGHILVKKAYADWSSDCLKNWKQ 56 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 ++ ++F+ G K+S D + +DA + S+ + + S Sbjct: 57 PLN----------ELAINPIQQFSYTQG----KNSSDAAMIIDAMDLLYSDKYDAFALIS 102 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 D FT L + L+ V V R D F+ LK+ Sbjct: 103 SDSDFTKLASRLKESEIYVFGVGEKK-----TPIAFRNACDDFIYTEVLKDR 149 >gi|319788348|ref|YP_004147823.1| hypothetical protein Psesu_2765 [Pseudoxanthomonas suwonensis 11-1] gi|317466860|gb|ADV28592.1| hypothetical protein Psesu_2765 [Pseudoxanthomonas suwonensis 11-1] Length = 250 Score = 114 bits (285), Expect = 7e-24, Method: Composition-based stats. Identities = 33/171 (19%), Positives = 55/171 (32%), Gaps = 29/171 (16%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M +P ++IAL ID N AS ID +L + Y + + Sbjct: 1 MAEPEKRIALLIDADNAPAS------KIDL--VLAEVARHGVANVRRAYGNWKSPNLKGW 52 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118 + + ++F + G K++ D+ + +DA + + L+ I Sbjct: 53 ----------EAVLHEYAIRPIQQFAYSSG----KNASDMAMVIDAMDLLYARNLDGFAI 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 S D FT LV L KV + F + L Sbjct: 99 VSSDADFTPLVMRLLTDGMKVYGFGEKKTPSP-----FVNACSKFTYVEAL 144 >gi|218296000|ref|ZP_03496780.1| protein of unknown function DUF88 [Thermus aquaticus Y51MC23] gi|218243738|gb|EED10266.1| protein of unknown function DUF88 [Thermus aquaticus Y51MC23] Length = 181 Score = 113 bits (284), Expect = 7e-24, Method: Composition-based stats. Identities = 38/169 (22%), Positives = 76/169 (44%), Gaps = 12/169 (7%) Query: 5 REKIALFIDGANLYASSKAL---GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 E++A+FIDG+NLY + +++ + + + ++RAYYY + + Sbjct: 1 MERVAIFIDGSNLYKGLVQHLGSDYRLNFVEFITLLTAGRKLLRAYYYNAPLPPEDPAAK 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIF 119 L++L + V E V+ +D+++A+D + + + ++ Sbjct: 61 AHQSFLNYLKRVPYVAVRLGRLERR---AEGFVEKGVDIQIAIDILRLAYADAYDIAILV 117 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 SGDG F +V +Q K+V + +++S +L +QAD F L Sbjct: 118 SGDGDFAEVVRVVQDMGKQV----ENTTFHALSSHRLAQQADRFYPLDD 162 >gi|270307718|ref|YP_003329776.1| hypothetical protein DhcVS_287 [Dehalococcoides sp. VS] gi|270153610|gb|ACZ61448.1| hypothetical protein DhcVS_287 [Dehalococcoides sp. VS] Length = 194 Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats. Identities = 35/173 (20%), Positives = 68/173 (39%), Gaps = 9/173 (5%) Query: 1 MFDPREKIALFIDGANLYASSKAL--GFDIDYRKLLKAFRSRAIVIRAYYYTT--VVGDP 56 M D E++ +FIDG+N+Y K+ DID+ R ++R YYY + Sbjct: 1 MTDTLERVMIFIDGSNMYHYLKSHFQRTDIDFGCFCSKIAGRRRLVRIYYYNAEVGRKEE 60 Query: 57 EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLE 114 ++F+ L + + ++ + +DV L+ D + Sbjct: 61 PERFNDQRKFFTSLEKISYMELRLGRLVYSGWPSTPPYEKGVDVLLSTDMLSHGFKNNFD 120 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 ++ +GD F + + A++ K V + S +LR+ AD + + Sbjct: 121 TAILVAGDSDFVSALQAVKDNGKNVEVALFGK---ERTSMELRKVADKIIAVD 170 >gi|312962938|ref|ZP_07777425.1| protein of unknown function DUF88 [Pseudomonas fluorescens WH6] gi|311282965|gb|EFQ61559.1| protein of unknown function DUF88 [Pseudomonas fluorescens WH6] Length = 246 Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats. Identities = 29/167 (17%), Positives = 52/167 (31%), Gaps = 29/167 (17%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 ++A+ ID N +S ++LL+ Y + Sbjct: 17 RLAVLIDADNASSSV--------VKELLEEVAKYGTATVKRAYGDWTTQHLVGWKGHLH- 67 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124 + + ++F G K+S D +DA + ++ ++ I S D Sbjct: 68 ---------KHAIQPIQQFAYTQG----KNSTDSAFIIDAMDLLYADNVDGFCIVSSDSD 114 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 FT L L+ K+V + D D F+ LK Sbjct: 115 FTRLATRLREAGKRVYGLGERK-----TPDAFIGACDKFIFFEVLKK 156 >gi|171909553|ref|ZP_02925023.1| hypothetical protein VspiD_00235 [Verrucomicrobium spinosum DSM 4136] Length = 312 Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats. Identities = 35/188 (18%), Positives = 71/188 (37%), Gaps = 26/188 (13%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M P A+++D N+ ++ + +D +K+++ + ++ Y Sbjct: 44 MIPPNNNATMAVYLDLENIVLGAQEARYPKVDIQKIMERLLLKGHIVTKKAYC------- 96 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114 + LH ++++ R+ K+S D+ + VDA + ++ Sbjct: 97 -DWERYKDFKRPLHEAAYELIEIPHV-------RQSGKNSADIRMVVDALDLCYTKGHVD 148 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL-KNEI 173 VI SGD F+ LV+ L+ K V + + S+ D F+ L + E Sbjct: 149 TFVIISGDSDFSPLVSKLRENAKTVIGM----GVKNSTSNLFITNCDEFIYYDDLVRKEQ 204 Query: 174 ARDPDEDK 181 +R K Sbjct: 205 SRASRSTK 212 >gi|225023600|ref|ZP_03712792.1| hypothetical protein EIKCOROL_00460 [Eikenella corrodens ATCC 23834] gi|224943482|gb|EEG24691.1| hypothetical protein EIKCOROL_00460 [Eikenella corrodens ATCC 23834] Length = 392 Score = 113 bits (283), Expect = 9e-24, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 51/180 (28%), Gaps = 30/180 (16%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 D + ++A+ ID N A +LL+ I Y + Sbjct: 5 DQQARLAVLIDADNAPADI--------IDRLLEEIAKYGIASVKRIYGDWSHGLSK---- 52 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 ++F G K++ D+ L +DA + S + I S Sbjct: 53 -------WKAALLPHAIIPVQQFAYTKG----KNATDMALVIDAMDLLYSGNFDGFCIVS 101 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 D FT L + L+ V R+ D F+ E R E Sbjct: 102 SDSDFTRLASRLRESGLTVYGFGEKK-----TPTAFRKACDKFIYTEIFLPEKQRAHKER 156 >gi|260774799|ref|ZP_05883701.1| hypothetical protein VIC_000167 [Vibrio coralliilyticus ATCC BAA-450] gi|260609224|gb|EEX35379.1| hypothetical protein VIC_000167 [Vibrio coralliilyticus ATCC BAA-450] Length = 259 Score = 113 bits (283), Expect = 9e-24, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 54/172 (31%), Gaps = 29/172 (16%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 D +KIA+ ID N + +LK ++ Y + + + Sbjct: 5 DSEKKIAVLIDAENAQYAVLDF--------VLKELSKHGHILVKKAYGDWSSECLKNWKQ 56 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 ++ ++F+ G K+S D + +DA + S + + S Sbjct: 57 PLN----------ELAINPIQQFSYTQG----KNSSDAAMIIDAMDLLYSNKYDAFALIS 102 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 D FT L + L+ V V R D F+ LK Sbjct: 103 SDSDFTKLASRLKESQIYVFGVGEKK-----TPLAFRNACDDFIYTEVLKER 149 >gi|194334672|ref|YP_002016532.1| hypothetical protein Paes_1873 [Prosthecochloris aestuarii DSM 271] gi|194312490|gb|ACF46885.1| conserved hypothetical protein [Prosthecochloris aestuarii DSM 271] Length = 252 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 27/182 (14%), Positives = 56/182 (30%), Gaps = 29/182 (15%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 + +++A+ ID N AS LL + Y + + Sbjct: 4 EKSQRLAVLIDADNTQASI--------IDGLLSEIAKYGVASVRRIYGDWTSPLLKGWK- 54 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 + + ++F G K++ D + +DA + + + I S Sbjct: 55 ---------EILLEHSIQPIQQFGYTKG----KNATDSAMIIDAMDLLYTGKFDGFCIVS 101 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 D FT L + ++ V + S D F+ + L+ + + Sbjct: 102 SDSDFTKLASRIRESGLFVFGFGEKKTPSPFVS-----ACDKFIYIEVLRARVNENEAIK 156 Query: 181 KK 182 +K Sbjct: 157 RK 158 >gi|237808105|ref|YP_002892545.1| hypothetical protein Tola_1344 [Tolumonas auensis DSM 9187] gi|237500366|gb|ACQ92959.1| protein of unknown function DUF88 [Tolumonas auensis DSM 9187] Length = 277 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 54/181 (29%), Gaps = 29/181 (16%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 +P ++A+ ID N AS LLK S Y Q+ Sbjct: 13 EEPTLRLAVLIDADNAQASV--------IDGLLKEVASFGEATVKRIYGDFTSPASSQWK 64 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIF 119 + Q K ++F G K++ D L +DA + + + + Sbjct: 65 KVLN----------QYAIKPVQQFAYTTG----KNATDSTLIIDAMDLLYTRRFDGFCLV 110 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 S D FT L ++ + + D R F+ YL+ + Sbjct: 111 SSDSDFTGLALRIREEGLTIVGFGEQK-----TPDAFRNACHKFIFTEYLRPTVQAPEVS 165 Query: 180 D 180 Sbjct: 166 P 166 >gi|159899759|ref|YP_001546006.1| hypothetical protein Haur_3241 [Herpetosiphon aurantiacus ATCC 23779] gi|159892798|gb|ABX05878.1| protein of unknown function DUF88 [Herpetosiphon aurantiacus ATCC 23779] Length = 789 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 39/191 (20%), Positives = 77/191 (40%), Gaps = 21/191 (10%) Query: 1 MFDPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 M P++ +A+FID N+Y S + ++ L++ V+ A Y Sbjct: 29 MNKPKQDVAVFIDFENIYVSVREKFDATPNFEALMERCEDYGRVVVARAYA--------D 80 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGR--KRVKSSMDVELAVDAFEQS---EGLE 114 + + L N + + + ++ GR + +K+S+D+ + +DA + Sbjct: 81 WYRYPRITSALFANNIEPMYVPTYYYDKDEGRMGRPIKNSVDMHMCIDAMRTLYTRTNIG 140 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA---YLKN 171 + +GD F LV ++++ K V IV AS L + AD F+ ++ Sbjct: 141 SYIFITGDRDFIALVNCVRQEGKDVIIVGIG----GAASSHLAQSADEFLFYEQIVDIRP 196 Query: 172 EIARDPDEDKK 182 R + +K Sbjct: 197 MGGRRNERHEK 207 >gi|256824346|ref|YP_003148306.1| hypothetical protein Ksed_04690 [Kytococcus sedentarius DSM 20547] gi|256687739|gb|ACV05541.1| uncharacterized conserved protein [Kytococcus sedentarius DSM 20547] Length = 412 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 66/183 (36%), Gaps = 23/183 (12%) Query: 5 REKIALFIDGANLYASSKAL--GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 ++IALF+D NL ++ G D + + A R V+ Y +S Sbjct: 3 EDRIALFVDYENLALGARDHLGGMTFDLKPIADALAERGRVVVRRAYA--------DWSY 54 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIF 119 L + +++ + K++ D+++ VDA E + + I Sbjct: 55 FDEDRRMLTRSHVELIEMPQRM------GASRKNAADIKMVVDAIEMAFERGYITTFAIC 108 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 +GD FT LV L+ K V V + S L D F+ L P + Sbjct: 109 TGDSDFTPLVHKLRELNKNVIGV----GVRNSTSAMLPPSCDEFLFYDTLDGVDPHTPAK 164 Query: 180 DKK 182 + K Sbjct: 165 ETK 167 >gi|309789837|ref|ZP_07684416.1| hypothetical protein OSCT_0367 [Oscillochloris trichoides DG6] gi|308228141|gb|EFO81790.1| hypothetical protein OSCT_0367 [Oscillochloris trichoides DG6] Length = 635 Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats. Identities = 38/185 (20%), Positives = 78/185 (42%), Gaps = 23/185 (12%) Query: 1 MFDPREK--IALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M ++ +A+FID N+Y S + L + ++ ++ V+ + Y Sbjct: 1 MSYENKRPDVAVFIDFENVYVSVRDKLNANPNFEAIMDRCGDLGRVVISRAYA------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRV--KSSMDVELAVDAFEQS---EG 112 + + L+ N + + + ++ GR K+S+D+ L +DA + Sbjct: 54 -DWYRYPRVTSALYANAIEPIYVATYYYDKDMGRTGRAIKNSVDMNLCIDAMKTLFTNTN 112 Query: 113 LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 + V+ +GD F LV +++++ K+V I+ AS L + AD F+ L Sbjct: 113 ISRFVLVTGDRDFIPLVNSIRQQGKEVYIIGIG----GAASTHLAQSADEFVFYEQL--- 165 Query: 173 IARDP 177 + + P Sbjct: 166 VGKQP 170 >gi|51244756|ref|YP_064640.1| hypothetical protein DP0904 [Desulfotalea psychrophila LSv54] gi|50875793|emb|CAG35633.1| hypothetical protein DP0904 [Desulfotalea psychrophila LSv54] Length = 258 Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 43/169 (25%), Positives = 80/169 (47%), Gaps = 13/169 (7%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAF-RSRAIVIRAYYYTT----VVGD 55 M++ K +++D N+ G+ + Y L++ A ++RA Y D Sbjct: 1 MYNDMLKTGIYVDAENIRMCG---GYGMRYDVLVELAGSGNAALLRANSYVAEDRERTKD 57 Query: 56 PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEH 115 + L+ D L GF+V+ K K F ++ G K++ D++LA+DA Q+ L+ Sbjct: 58 DAEYRHKLYRYHDVLRQCGFKVIKKFVKHFVDDEGILTTKANADMDLAIDALLQARNLDR 117 Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 +++ +GD F L+ ALQ +V +++ S +L+ AD F+ Sbjct: 118 IILLTGDSDFIRLILALQNMGCRVEVIAF-----KHVSQELKECADNFL 161 >gi|237799136|ref|ZP_04587597.1| hypothetical protein POR16_09916 [Pseudomonas syringae pv. oryzae str. 1_6] gi|331021991|gb|EGI02048.1| hypothetical protein POR16_09916 [Pseudomonas syringae pv. oryzae str. 1_6] Length = 264 Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 27/179 (15%), Positives = 53/179 (29%), Gaps = 29/179 (16%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 ++ +A+ ID N A+ L + + Y G + Sbjct: 9 SQKHLAVLIDADNAPAAI--------VDGLFEEIAKYGVASVKRIYGDWTGPQLGGWKK- 59 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSG 121 + ++F G K++ D L +DA + + + + S Sbjct: 60 ---------VLLDYSIQPIQQFAYTKG----KNATDSSLIIDAMDLLYTRRFDGFCLVSS 106 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 D FT L + L+ + V + + D F+ + L+ E D Sbjct: 107 DSDFTRLASRLREEGLTVYGFGEEKTPRPFVA-----ACDKFIYIELLREEQPVPVSAD 160 >gi|194337430|ref|YP_002019224.1| hypothetical protein Ppha_2419 [Pelodictyon phaeoclathratiforme BU-1] gi|194309907|gb|ACF44607.1| conserved hypothetical protein [Pelodictyon phaeoclathratiforme BU-1] Length = 247 Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 28/182 (15%), Positives = 53/182 (29%), Gaps = 29/182 (15%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 + E++A+ ID N A+ LL Y + + Sbjct: 4 EKTERLAVLIDADNTQATI--------IEGLLAEVAKYGTSSVKRIYGDWTSTALRSWK- 54 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 + + ++F G K++ D + +DA + + I S Sbjct: 55 ---------EVLLEYSIQPIQQFGYTKG----KNATDSAMIIDAMDLLYTGRFHGFCIVS 101 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 D FT L + ++ V D F+ + L+ +I + Sbjct: 102 SDSDFTKLASRIRESGLFVYGFGEKK-----TPSAFVSACDKFIYIEVLRAKINENESIA 156 Query: 181 KK 182 KK Sbjct: 157 KK 158 >gi|149913285|ref|ZP_01901818.1| hypothetical protein RAZWK3B_08291 [Roseobacter sp. AzwK-3b] gi|149812405|gb|EDM72234.1| hypothetical protein RAZWK3B_08291 [Roseobacter sp. AzwK-3b] Length = 186 Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 57/174 (32%), Positives = 95/174 (54%), Gaps = 3/174 (1%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M +K+A+ IDG L + LG IDYR+L F + + YY V D + Sbjct: 6 MLYSTDKLAILIDGQALTSLGFGLGMKIDYRRLKSRFARVSKLTTVKYYAIVDADKVEN- 64 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 P LLDWL YNG+Q+ K+A+ F + G + VK S+ +L+VD ++ ++H+++ Sbjct: 65 -PYVKLLDWLDYNGYQIHRKMARVFDDVDGAR-VKGSITADLSVDIIMMAKQVDHILLIG 122 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 G + + +R +VT++S++ ++ +D LRR D F++L L+NEIA Sbjct: 123 GHTDYCYAIQQAKRFGARVTLLSSLKAEGFRPADDLRRIVDDFIELEDLRNEIA 176 >gi|302337118|ref|YP_003802324.1| protein of unknown function DUF88 [Spirochaeta smaragdinae DSM 11293] gi|301634303|gb|ADK79730.1| protein of unknown function DUF88 [Spirochaeta smaragdinae DSM 11293] Length = 250 Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 29/182 (15%), Positives = 51/182 (28%), Gaps = 29/182 (15%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 ++K+A+ ID N S LL I Y + + Sbjct: 7 EQSQQKLAVLIDADNTQGSI--------VEGLLAEVAKYGIASVKRIYGDWTSPNLRSWK 58 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIF 119 + ++F G K++ D + +DA + +E + I Sbjct: 59 ----------EVLLEHSIIPIQQFGYTSG----KNATDSAMIIDAMDLLYTERFDGFCIV 104 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 S D FT L A ++ + V D F+ L+ + Sbjct: 105 SSDSDFTRLAARIREEGLTVYGFGEKK-----TPRAFVSACDKFIYTEILREDAEEVHST 159 Query: 180 DK 181 K Sbjct: 160 KK 161 >gi|86159239|ref|YP_466024.1| hypothetical protein Adeh_2817 [Anaeromyxobacter dehalogenans 2CP-C] gi|85775750|gb|ABC82587.1| protein of unknown function DUF88 [Anaeromyxobacter dehalogenans 2CP-C] Length = 253 Score = 113 bits (282), Expect = 1e-23, Method: Composition-based stats. Identities = 36/168 (21%), Positives = 59/168 (35%), Gaps = 22/168 (13%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 ++IALFID NL + D + L + V+ Y ++ Sbjct: 4 EHSDQRIALFIDFENLVTRTGLSAETFDLQPALDTLLEKGKVVFRRAYA--------DWT 55 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVI 118 LH G ++V + K+ D+ L +DA E + E ++ VI Sbjct: 56 RFSAATPRLHEKGVELVDVP-------PSTRAGKNGADMRLVIDALELAYLREHIDTFVI 108 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 SGD F L L+ + V ++ S + D F+ L Sbjct: 109 ASGDSDFCPLAYKLRENDRTVIGMA----VREATSPLFVKACDEFIYL 152 >gi|222112194|ref|YP_002554458.1| hypothetical protein Dtpsy_3025 [Acidovorax ebreus TPSY] gi|221731638|gb|ACM34458.1| protein of unknown function DUF88 [Acidovorax ebreus TPSY] Length = 285 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 34/174 (19%), Positives = 57/174 (32%), Gaps = 29/174 (16%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M + + +IAL ID N A ID ++L + + Y + Sbjct: 1 MAERQLRIALLIDADN------APADKID--EILTELSTLGEINVRRAYGNWTKSGLGGW 52 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118 + + ++F + K++ D+ + VDA E SE + + Sbjct: 53 QQRL----------LEFAIRPIQQFDYSK----RKNATDMAMTVDAMELLYSERPDAFGL 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 S D FT LV L+ K V + F+ L L +E Sbjct: 99 VSSDADFTPLVMHLRAKGSAVYGFGAAQTPKP-----FVNACSRFLYLESLVSE 147 >gi|182414934|ref|YP_001820000.1| hypothetical protein Oter_3120 [Opitutus terrae PB90-1] gi|177842148|gb|ACB76400.1| protein of unknown function DUF88 [Opitutus terrae PB90-1] Length = 264 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 67/178 (37%), Gaps = 23/178 (12%) Query: 8 IALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 +A+F+D N+ ++ F +D K+L+ + ++ Y F L Sbjct: 10 LAVFLDLENIAHGARDAHFPPLDISKVLERLLLKGNIVVKKAYC--------DFDRFKEL 61 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDG 123 LH F+++ R+ K+S D+ + VDA + + ++ I SGD Sbjct: 62 KRDLHEAAFELIEIPHV-------RQSGKNSADIRMVVDALDLCYTNQHVDAFAIISGDS 114 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 F+ LV+ L+ K V + + SD D F+ L P + Sbjct: 115 DFSPLVSKLRENAKTVIGL----GVKNSTSDLFIANCDEFIYYDDLVRAQPAKPARSR 168 >gi|332653782|ref|ZP_08419526.1| conserved hypothetical protein [Ruminococcaceae bacterium D16] gi|332516868|gb|EGJ46473.1| conserved hypothetical protein [Ruminococcaceae bacterium D16] Length = 291 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 24/174 (13%), Positives = 53/174 (30%), Gaps = 31/174 (17%) Query: 1 MFDPRE--KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58 M + + ++A+ ID N ++ + ++ Y Sbjct: 30 MPESEKDLRLAVLIDADNASRTA--------MKDVMAEVAVYGTPTIKRIYGDWTSPNMN 81 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHL 116 + + ++++ G K+S D + +DA + S + Sbjct: 82 SWKS----------ILLETAITPIQQYSYTTG----KNSTDSAMIIDAMDILYSGTCDGF 127 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 V+ S D FT L L+ KV + + D F+ + ++ Sbjct: 128 VLVSSDSDFTRLATRLREAGMKVYGMGEKKTPKP-----FIVACDKFVYIEVIR 176 >gi|319956985|ref|YP_004168248.1| hypothetical protein Nitsa_1246 [Nitratifractor salsuginis DSM 16511] gi|319419389|gb|ADV46499.1| hypothetical protein Nitsa_1246 [Nitratifractor salsuginis DSM 16511] Length = 254 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 28/184 (15%), Positives = 55/184 (29%), Gaps = 29/184 (15%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M + ++ IA+ ID N + + +LK VI Y + Sbjct: 1 MQEKKKHIAMLIDCDNASPYA--------IKGILKELSKYGEVIVRQAYGNWNSQQLAPW 52 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVI 118 + K ++F G K++ D+ + +DA + ++ L+ + Sbjct: 53 ----------MERLLEHSIKPIQQFDYTKG----KNATDIAMVIDAMDIMYTKDLDGFAL 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 + D FT L L V F+ L+ E + Sbjct: 99 VTSDSDFTPLAQRLMSNGLTVYGFGEKK-----TPKAFINSCSQFIYTENLEREEKKSKS 153 Query: 179 EDKK 182 ++ Sbjct: 154 RTEE 157 >gi|30248674|ref|NP_840744.1| hypothetical protein NE0665 [Nitrosomonas europaea ATCC 19718] gi|30180269|emb|CAD84576.1| conserved hypothetical protein [Nitrosomonas europaea ATCC 19718] Length = 269 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 27/182 (14%), Positives = 53/182 (29%), Gaps = 29/182 (15%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 +P ++A+ ID N A+ LL Y + Sbjct: 13 EEPTLRLAVLIDADNAQAAV--------IEGLLAEIARFGEATVKRIYGDFTAPASASWK 64 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIF 119 + + K ++F G K++ D L +DA + + + + Sbjct: 65 KVLQ----------KYAIKPVQQFAYTTG----KNATDSTLIIDAMDLLYTRKFDGFCLI 110 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 + D FT L L+ + V + R F+ L+ + A + Sbjct: 111 TSDSDFTGLAMRLREEGLTVLGFGEKK-----TPEAFRNACHKFVFTEVLRPDTATESAA 165 Query: 180 DK 181 + Sbjct: 166 QR 167 >gi|291612593|ref|YP_003522750.1| hypothetical protein Slit_0121 [Sideroxydans lithotrophicus ES-1] gi|291582705|gb|ADE10363.1| protein of unknown function DUF88 [Sideroxydans lithotrophicus ES-1] Length = 274 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 35/170 (20%), Positives = 61/170 (35%), Gaps = 23/170 (13%) Query: 9 ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 ALF D N+ + + D +K+L+ + ++ Y + Sbjct: 11 ALFCDFENVALGVRDAKYAQFDIKKVLERLLLKGSIVVKKAYC--------DWDRYKEFK 62 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLEHLVIFSGDGC 124 +H F+++ R+ K+S D+ + VDA + ++ VI SGD Sbjct: 63 ATMHEAAFELIEIPHV-------RQSGKNSADIRMVVDALDLCYTKAHVDTFVIISGDSD 115 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 F+ LV+ L+ K V + SD L D F+ L Sbjct: 116 FSPLVSKLRENNKYVIGI----GVKDSTSDLLSANCDEFIFYDDLVRVQE 161 >gi|71905737|ref|YP_283324.1| hypothetical protein Daro_0095 [Dechloromonas aromatica RCB] gi|71845358|gb|AAZ44854.1| Protein of unknown function DUF88 [Dechloromonas aromatica RCB] Length = 273 Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats. Identities = 27/167 (16%), Positives = 48/167 (28%), Gaps = 29/167 (17%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 ++A+ ID N A+ LL Y Q+ + Sbjct: 13 RLAVLIDADNAQATV--------IEGLLAEVARFGEATVKRIYGDFTSPSSSQWKKVLN- 63 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124 Q K ++F G K++ D + +DA + + + + S D Sbjct: 64 ---------QHAIKPVQQFAYTTG----KNATDSTMIIDAMDLLYTRRFDGFCLVSSDSD 110 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 FT L ++ + V D R F+ L+ Sbjct: 111 FTGLALRIREEGLTVLGFGEEK-----TPDAFRNACHKFIFTEILRP 152 >gi|160896833|ref|YP_001562415.1| hypothetical protein Daci_1386 [Delftia acidovorans SPH-1] gi|160362417|gb|ABX34030.1| protein of unknown function DUF88 [Delftia acidovorans SPH-1] Length = 303 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 34/173 (19%), Positives = 56/173 (32%), Gaps = 29/173 (16%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M +P+ +IAL ID N A ID ++L + ++ Y + Sbjct: 1 MPEPQPRIALLIDADN------APAEMID--EILTELSTFGVIDIRRAYGNWTKHSLSGW 52 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118 + ++F + K++ D+ + VDA E +E + I Sbjct: 53 QR----------KLLDFALRPMQQFDYSKH----KNATDMAMTVDAMELLYTERPDAFGI 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 S D FT LV L+ K V + F+ L L Sbjct: 99 VSSDADFTPLVMHLRSKGAAVYGFGMAQTPQP-----FVNACSRFLYLEALGE 146 >gi|51102893|gb|AAT96043.1| hypothetical protein [Pseudomonas viridiflava] Length = 280 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 25/174 (14%), Positives = 51/174 (29%), Gaps = 29/174 (16%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 ++ +A+ ID N ++ L + + Y G + Sbjct: 18 HAQKHLAVLIDADNAQSAI--------VEGLFEEIAKYGVANVKRIYGDWTGPQLGGWKK 69 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 + + ++F G K++ D L +DA + + + + S Sbjct: 70 ----------VLLENSIQPIQQFAYTKG----KNATDSSLIIDAMDLLYTRRFDGFCLVS 115 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 D FT L + L+ + V D F+ L+ E+ Sbjct: 116 SDSDFTRLASRLREEGLTVYGFGEEK-----TPKSFVSACDKFIYTELLRAEVQ 164 >gi|297623823|ref|YP_003705257.1| hypothetical protein Trad_1595 [Truepera radiovictrix DSM 17093] gi|297165003|gb|ADI14714.1| protein of unknown function DUF88 [Truepera radiovictrix DSM 17093] Length = 173 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 39/171 (22%), Positives = 74/171 (43%), Gaps = 14/171 (8%) Query: 6 EKIALFIDGANLYASSKAL--GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE--QQFS 61 E++A+FIDG+NLY + G ++ ++ + + ++R YYY + D ++ Sbjct: 3 ERVAVFIDGSNLYNGMRDNLTGTRVNLQEFVAQLVCKRHLVRTYYYNAPLTDDYDTERRE 62 Query: 62 PLHPLLDWLHYNGF-QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVI 118 + L + V + V+ +DV +AV++ + + +++ Sbjct: 63 GQQRFFESLSRIPYVTVRLGRLHRRFDG---TLVEKGVDVAIAVESLSLAYENAYDTVLL 119 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 SGDG + LV A++RK K V + ++ L AD F L L Sbjct: 120 VSGDGDYVQLVEAIKRKGKHVECAMF----RNQSAGVLIEYADVFHPLDDL 166 >gi|257784783|ref|YP_003180000.1| hypothetical protein Apar_0980 [Atopobium parvulum DSM 20469] gi|257473290|gb|ACV51409.1| protein of unknown function DUF88 [Atopobium parvulum DSM 20469] Length = 260 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 40/197 (20%), Positives = 71/197 (36%), Gaps = 36/197 (18%) Query: 1 MFDPREKIALFIDGANLYASS--------KALGFDIDYRKLLKAFRSRAIVIRAYYYTTV 52 + P+ IA+FID NL + + G + + +++ + + Y Sbjct: 4 ISTPQSSIAVFIDYENLALGTGKRKRNGHQEPGHLPEMKLIMERLVDKGRITAKRAYC-- 61 Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS-- 110 + + LH G +++ + +T K+S D+ LAVDA E Sbjct: 62 ------DWQRFPNAITPLHELGIELIEIPDRAYTG-------KNSADIRLAVDAVEMCLT 108 Query: 111 -EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 + ++ + SGD F+ LVA L+ K V V S L D F+ + Sbjct: 109 KDHIDTFAVLSGDSDFSPLVAKLKEAGKTVIGV----GMKESTSSLLAEVCDEFIFYEDI 164 Query: 170 K------NEIARDPDED 180 + + P E Sbjct: 165 LSSGRIPDFKEKVPAEK 181 >gi|326204799|ref|ZP_08194653.1| protein of unknown function DUF88 [Clostridium papyrosolvens DSM 2782] gi|325985011|gb|EGD45853.1| protein of unknown function DUF88 [Clostridium papyrosolvens DSM 2782] Length = 258 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 55/176 (31%), Gaps = 29/176 (16%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M ++A+ ID N+ S + + +++ Y + Sbjct: 1 MSPDEMRLAVLIDAENVPYS--------NVKGIMEEIARHGTPTIKRIYADWTKPTMSGW 52 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVI 118 + ++++ G K+S D + +DA + S+ +E I Sbjct: 53 K----------NVLLENAITPIQQYSYTSG----KNSSDSAMIIDAMDILYSDQVEGFCI 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 S D FT LV L+ KKV + + D F + + + Sbjct: 99 ISSDSDFTRLVTRLREAGKKVYGIGERKTPSP-----FIAACDKFTYIEIISASLQ 149 >gi|83646130|ref|YP_434565.1| hypothetical protein HCH_03390 [Hahella chejuensis KCTC 2396] gi|83634173|gb|ABC30140.1| uncharacterized conserved protein [Hahella chejuensis KCTC 2396] Length = 303 Score = 112 bits (280), Expect = 2e-23, Method: Composition-based stats. Identities = 51/168 (30%), Positives = 80/168 (47%), Gaps = 12/168 (7%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVI-RAYYYTTVVGDPEQQ 59 M K +FID NL G +DY ++K +++ RA Y V D EQ+ Sbjct: 1 MKYDGLKAGIFIDNDNLIYGQDREG--LDYSAIIKFVEDLGMLVIRANTYMAVDEDREQK 58 Query: 60 ----FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEH 115 + GF+V K K++ + G K ++D+ELAVDA Q++ L++ Sbjct: 59 DAKYRQEQRKHRSDIRNAGFRVFEKPLKKYQQEDGTVYAKGNVDLELAVDALLQTDNLDY 118 Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163 +++ SGDG F+ +V+ALQ K KKV + S +L + D F Sbjct: 119 VLLGSGDGDFSRVVSALQHKGKKVEAFAFD-----NISTELSQGVDTF 161 >gi|51102938|gb|AAT96087.1| hypothetical protein [Pseudomonas viridiflava] Length = 280 Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats. Identities = 25/174 (14%), Positives = 51/174 (29%), Gaps = 29/174 (16%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 ++ +A+ ID N ++ L + + Y G + Sbjct: 18 HAQKHLAVLIDADNAQSAI--------VEGLFEEIAKYGVANVKRIYGDWTGPQLGGWKK 69 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 + + ++F G K++ D L +DA + + + + S Sbjct: 70 ----------VLLENSIQPIQQFAYTKG----KNATDSSLIIDAMDLLYTRRFDGFCLVS 115 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 D FT L + L+ + V D F+ L+ E+ Sbjct: 116 SDSDFTRLASRLREEGLTVYGFGEEK-----TPKSFVSACDKFIYTELLRAEVQ 164 >gi|327482222|gb|AEA85532.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166] Length = 277 Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 27/181 (14%), Positives = 54/181 (29%), Gaps = 29/181 (16%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 + ++ +A+ ID N A+ L + + Y + Sbjct: 9 NKQKHLAVLIDADNAPAAI--------VEGLFEEIAKYGVASVKRIYGDWTKPNLGSWKK 60 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 + ++F G K++ D L +DA + + + + S Sbjct: 61 ----------VLLDHSIQPIQQFAYTSG----KNATDSSLIIDAMDLLYTRRFDGFCLVS 106 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 D FT L A ++ + V + S D F+ L+ + A+ E Sbjct: 107 SDSDFTRLAARIREEGLTVYGFGEQKTPSPFVS-----ACDKFIYTEILRADAAKASVEP 161 Query: 181 K 181 Sbjct: 162 P 162 >gi|154496234|ref|ZP_02034930.1| hypothetical protein BACCAP_00519 [Bacteroides capillosus ATCC 29799] gi|150274317|gb|EDN01394.1| hypothetical protein BACCAP_00519 [Bacteroides capillosus ATCC 29799] Length = 288 Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 27/181 (14%), Positives = 55/181 (30%), Gaps = 29/181 (16%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M + ++A+ ID N S+ R ++ Y + Sbjct: 1 MDNQDLRLAVLIDADNAPRSA--------LRDIMAEAAVYGTPTVKRIYGDWTTPNMASW 52 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118 P + ++++ G K++ D + +DA + S + V+ Sbjct: 53 KP----------LLLEHAITPIQQYSYTTG----KNATDSAMIIDAMDLLYSGRCDGFVL 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 S D FT L L+ KV + + D F+ + ++ + Sbjct: 99 VSSDSDFTRLATRLREAGMKVYGMGEKKTPLP-----FIVACDKFIYIEVIRAAGEKARQ 153 Query: 179 E 179 E Sbjct: 154 E 154 >gi|302336205|ref|YP_003801412.1| protein of unknown function DUF88 [Olsenella uli DSM 7084] gi|301320045|gb|ADK68532.1| protein of unknown function DUF88 [Olsenella uli DSM 7084] Length = 258 Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 40/181 (22%), Positives = 67/181 (37%), Gaps = 31/181 (17%) Query: 1 MFDPREK-IALFIDGANLYASS--------KALGFDIDYRKLLKAFRSRAIVIRAYYYTT 51 M + + +A+ ID NL + + G D +++L+ + + Y Sbjct: 1 MSEANQSSLAVLIDYENLALGTGRRKRNGHQEPGPRPDAKRILERLVDKGRITAKRAYC- 59 Query: 52 VVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS- 110 + + LH G +++ + FT K+S D+ LAVDA E Sbjct: 60 -------DWQRFDDAITPLHELGIELIEIPDRAFTG-------KNSADIRLAVDAMEMCL 105 Query: 111 --EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 + ++ I SGD F+ LVA L+ K V V S L D F+ Sbjct: 106 TKDHIDTFAILSGDSDFSPLVAKLKEFGKTVIGV----GMKESTSTLLAEVCDEFLFYED 161 Query: 169 L 169 + Sbjct: 162 I 162 >gi|296134764|ref|YP_003642006.1| protein of unknown function DUF88 [Thiomonas intermedia K12] gi|295794886|gb|ADG29676.1| protein of unknown function DUF88 [Thiomonas intermedia K12] Length = 259 Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 54/172 (31%), Gaps = 30/172 (17%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M +IAL ID N + ID ++L I+ Y Sbjct: 1 MSH-EPRIALLIDADN------SPADMID--EVLDELAKEGIINIRRAYGNWKSPH---- 47 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118 L+ + ++F G K++ D + +DA + ++ L+ I Sbjct: 48 ------LNAWAALLHDFAIQPIQQFDYTKG----KNATDAAMIIDAMDLLYTKQLDGFGI 97 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 S D FT LV L+ KV + F+ L L+ Sbjct: 98 VSSDSDFTPLVMRLRANGLKVYGFGEQKTPKP-----FVNACSKFLYLENLR 144 >gi|189347523|ref|YP_001944052.1| hypothetical protein Clim_2044 [Chlorobium limicola DSM 245] gi|189341670|gb|ACD91073.1| conserved hypothetical protein [Chlorobium limicola DSM 245] Length = 249 Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 25/173 (14%), Positives = 53/173 (30%), Gaps = 29/173 (16%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 D ++A+ ID N + +L Y + + Sbjct: 4 DKSGRLAVLIDADNAQPAI--------IEGILSEIAQYGTASVRRIYGDWTSTALKSWK- 54 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 +++ + + + + G + K++ D + +DA + + + I S Sbjct: 55 -------------ELLLQHSIQPIQQFGYTKGKNATDSAMIIDAMDLLYTGKFDGFCIVS 101 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 D FT L + L+ V + S D F+ L+ +I Sbjct: 102 SDSDFTKLASRLRESGLTVYGFGEKKTPSPFVS-----ACDKFIYTELLRAKI 149 >gi|254432040|ref|ZP_05045743.1| DUF88 [Cyanobium sp. PCC 7001] gi|197626493|gb|EDY39052.1| DUF88 [Cyanobium sp. PCC 7001] Length = 219 Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 47/207 (22%), Positives = 89/207 (42%), Gaps = 39/207 (18%) Query: 2 FDPREK-IALFIDGANLYASSKALGFDIDYRKLLKAFRSRA--IVIRAYYYTTVVGDPEQ 58 F PR + + + +DG +++ + + LG+ D R+LL+ S+ + A++Y + Sbjct: 13 FQPRPRQLVVAVDGHSMFYAQQKLGWFFDPRRLLRHASSQPGLELAGAFWYAGLKDP--- 69 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFT-----------ENCGRK--------------- 92 S P D L GF V + +E + R Sbjct: 70 --SDQRPFRDALTSLGFTVRTRPLRELAPPASNGSTQAADGEHRHPEPPRPTDQRPADQR 127 Query: 93 -RVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151 V++++DVE+AVD + + + + SG LV L+ + ++T+++T M Sbjct: 128 HFVRANLDVEVAVDLMMVAPRTDEVWLLSGSRDLDRLVEVLRAQGVRITLMTT----EGM 183 Query: 152 ASDQLRRQADYFMDLAYLKNEIARDPD 178 + +LR AD F+DLA L+ + + Sbjct: 184 VARELRNAADGFVDLASLRPVLEKAES 210 >gi|296272728|ref|YP_003655359.1| hypothetical protein Arnit_1193 [Arcobacter nitrofigilis DSM 7299] gi|296096902|gb|ADG92852.1| protein of unknown function DUF88 [Arcobacter nitrofigilis DSM 7299] Length = 236 Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 54/181 (29%), Gaps = 29/181 (16%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +K+A+ ID N AS +LL+ I Y + + Sbjct: 5 STDKLAVLIDADNAQASV--------ISELLEEIAKFGITNIKRAYGDWTTSQLKGWKEH 56 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSG 121 + ++F+ G K++ D L +DA + L+ I S Sbjct: 57 LH----------THAIQPIQQFSYTNG----KNATDSSLIIDAMDILHENRLDGFCIISS 102 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 D FT L ++ KV + D F+ L+ ++ Sbjct: 103 DSDFTRLATRIRESGLKVYGFGEQK-----TPEAFISACDKFVYTENLREIKEVPQTNNE 157 Query: 182 K 182 + Sbjct: 158 Q 158 >gi|255931419|ref|XP_002557266.1| Pc12g03870 [Penicillium chrysogenum Wisconsin 54-1255] gi|211581885|emb|CAP80014.1| Pc12g03870 [Penicillium chrysogenum Wisconsin 54-1255] Length = 259 Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 51/181 (28%), Gaps = 29/181 (16%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 D K + ID N S LL Y + +S Sbjct: 4 DKSPKFVVLIDADNAQFSI--------VTDLLAEVAKHGTAHVKRAYGDWTNTGLKGWS- 54 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFS 120 + + ++F G K++ D + VDA + S + + S Sbjct: 55 ---------DVLLRNSIQPIQQFAYTHG----KNATDSAMIVDAMDLLHSGNFDGFCLVS 101 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 D FT L ++ KV + + D F+ LK P+ + Sbjct: 102 SDSDFTRLATRIRESGLKVYGFGERKTPKPFVA-----ACDEFIYTEDLKYLPEFAPNSN 156 Query: 181 K 181 + Sbjct: 157 E 157 >gi|256419852|ref|YP_003120505.1| hypothetical protein Cpin_0806 [Chitinophaga pinensis DSM 2588] gi|256034760|gb|ACU58304.1| protein of unknown function DUF88 [Chitinophaga pinensis DSM 2588] Length = 246 Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 25/183 (13%), Positives = 59/183 (32%), Gaps = 29/183 (15%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M + ++A+ ID N+ + +++++ I Y + Sbjct: 1 MENKDLRLAVLIDADNIPYN--------KVKEMMEEVAKYGIPTFKRIYGDWTKPTLAGW 52 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVI 118 + ++++ G K++ D + +DA + + ++ + Sbjct: 53 KTVLLDNA----------ITPIQQYSYTSG----KNATDSAMIIDAMDILYTGRVDGFCL 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 + D FT L L+ +V + R D F+ L L +E+ Sbjct: 99 ITSDSDFTRLATRLREAGMRVFGLGEKK-----TPSAFRAACDKFIYLEILVSEVKDASV 153 Query: 179 EDK 181 + K Sbjct: 154 KPK 156 >gi|325982853|ref|YP_004295255.1| hypothetical protein NAL212_2271 [Nitrosomonas sp. AL212] gi|325532372|gb|ADZ27093.1| Domain of unknown function DUF88 [Nitrosomonas sp. AL212] Length = 292 Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 49/171 (28%), Gaps = 29/171 (16%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 +P ++A+ ID N A+ LL Y + Sbjct: 36 EEPTLRLAVLIDADNAQAAV--------IESLLAEIARFGEATVKRIYGDFTAHASASWK 87 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIF 119 + + K ++F G K++ D L +DA + + + + Sbjct: 88 KVLQ----------KYAIKPVQQFAYTTG----KNATDSALIIDAMDLLYTRKFDGFCLI 133 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 + D FT L L+ + V D R F+ L+ Sbjct: 134 TSDSDFTGLAMRLREEGLTVLGFGEKK-----TPDAFRNACHKFVFTEILR 179 >gi|115377562|ref|ZP_01464761.1| hypothetical protein STIAU_6634 [Stigmatella aurantiaca DW4/3-1] gi|115365449|gb|EAU64485.1| hypothetical protein STIAU_6634 [Stigmatella aurantiaca DW4/3-1] Length = 359 Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 36/166 (21%), Positives = 59/166 (35%), Gaps = 22/166 (13%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +IALF+D NL ++ D + L + V+ Y +S Sbjct: 51 NESRIALFLDFENLVTNTGISTAGFDLQPSLDRLLEKGKVVFRRAYC--------DWSRF 102 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFS 120 LH +G ++V + K+ D+ L +DA E E ++ VI S Sbjct: 103 SDAKGRLHEHGVELVDVP-------PSTRAGKNGADMRLVIDALELCYAREHIDTFVIAS 155 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 GD F L L+ + V ++ S + D F+ L Sbjct: 156 GDSDFCPLAYKLRENGRTVIGLA----VKESTSPLFVKACDEFLYL 197 >gi|300866267|ref|ZP_07110978.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506] gi|300335738|emb|CBN56138.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506] Length = 157 Score = 112 bits (279), Expect = 3e-23, Method: Composition-based stats. Identities = 44/163 (26%), Positives = 83/163 (50%), Gaps = 13/163 (7%) Query: 17 LYASSKALGFDIDYRKLLKAFRSRAI---VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYN 73 ++ + + G+ D R++L+ F++ +I A++YT + D L Sbjct: 1 MFYAQQKNGWFFDPRRVLEYFKNAQQNVMLINAFWYTGLKDP-----QDQRGFRDALISL 55 Query: 74 GFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAAL 132 G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +V+FSGDG F + L Sbjct: 56 GYTVRTKILKEYYDDASGRYSQKANLDIEIVVDMFNTVDQYDQVVLFSGDGDFERAIELL 115 Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 + K +T+VST M + +LR D ++DL ++ I + Sbjct: 116 RSKNTHITVVST----EGMIARELRNATDRYIDLNEIREHIEK 154 >gi|21673303|ref|NP_661368.1| hypothetical protein CT0467 [Chlorobium tepidum TLS] gi|21646394|gb|AAM71710.1| conserved hypothetical protein [Chlorobium tepidum TLS] Length = 426 Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 56/184 (30%), Gaps = 29/184 (15%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M RE IA+ ID N + ID+ +L +V Y + + Sbjct: 1 MEHSRETIAMLIDADN------SPSDKIDF--ILAEMAKYGVVNIRRAYGNWKSHSLKGW 52 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118 + ++F G K++ D+ + +D + S+ L+ I Sbjct: 53 ----------EDKLHDYAIRPIQQFDYTKG----KNATDMAMTIDGMDLLFSKKLDAFCI 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 S D FT LV + + V + F+ L E + Sbjct: 99 VSSDSDFTPLVMRILSEGLNVYGFGQKSTPLP-----FVNACSTFLYLDSFAGEKEQTKS 153 Query: 179 EDKK 182 + + Sbjct: 154 DSCR 157 >gi|220928157|ref|YP_002505066.1| hypothetical protein Ccel_0707 [Clostridium cellulolyticum H10] gi|219998485|gb|ACL75086.1| protein of unknown function DUF88 [Clostridium cellulolyticum H10] Length = 258 Score = 111 bits (278), Expect = 3e-23, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 55/176 (31%), Gaps = 29/176 (16%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M ++A+ ID N+ S + + +++ Y + Sbjct: 1 MSPDEMRLAVLIDAENVPYS--------NVKGIMEEIAKHGTPTLKRIYADWTKPTMSGW 52 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVI 118 + ++++ G K+S D + +DA + S+ +E I Sbjct: 53 K----------NVLLENAITPIQQYSYTSG----KNSSDSAMIIDAMDILYSDQVEGFCI 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 S D FT LV L+ KKV + + D F + + + Sbjct: 99 VSSDSDFTRLVTRLREAGKKVYGIGERKTPSP-----FIAACDKFTYIEIISASLQ 149 >gi|309781025|ref|ZP_07675764.1| conserved hypothetical protein [Ralstonia sp. 5_7_47FAA] gi|308920328|gb|EFP65986.1| conserved hypothetical protein [Ralstonia sp. 5_7_47FAA] Length = 247 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 29/173 (16%), Positives = 51/173 (29%), Gaps = 29/173 (16%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M ++A+ ID N A+ ++LL+ + Y + Sbjct: 9 MAQDALRLAVLIDADNASAAV--------IKELLEEVAKYGVATVKRSYGDWTTQNLVGW 60 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118 + + ++F G K+S D +DA + ++ + Sbjct: 61 KDHLH----------RHAIQPMQQFAYTKG----KNSTDSACIIDAMDLLYGGNVDGFCL 106 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 S D FT L L+ K V D D F+ + LK Sbjct: 107 VSSDSDFTRLATRLREAGKVVYGFGERK-----TPDAFIAACDKFVFVEVLKQ 154 >gi|332703643|ref|ZP_08423731.1| protein of unknown function DUF88 [Desulfovibrio africanus str. Walvis Bay] gi|332553792|gb|EGJ50836.1| protein of unknown function DUF88 [Desulfovibrio africanus str. Walvis Bay] Length = 251 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 30/176 (17%), Positives = 53/176 (30%), Gaps = 29/176 (16%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M +++A+ ID N AS+ LLK Y + + Sbjct: 1 MVANADRLAVLIDADNATASA--------IDGLLKEVSKYGTPTVKRAYGDWTTSQLKSW 52 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118 + + ++F+ G K+S D L +DA + S I Sbjct: 53 K----------DVLHKYAIQPEQQFSYTKG----KNSTDSALIIDAMDLLYSRNFTGFCI 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 S D +T L +++ V + + D F+ L K + Sbjct: 99 VSSDSDYTRLATRIRQDGVFVYGFGERKTPEPFVA-----ACDKFVFLEIFKESVE 149 >gi|310821658|ref|YP_003954016.1| hypothetical protein STAUR_4409 [Stigmatella aurantiaca DW4/3-1] gi|309394730|gb|ADO72189.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1] Length = 331 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 36/166 (21%), Positives = 59/166 (35%), Gaps = 22/166 (13%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +IALF+D NL ++ D + L + V+ Y +S Sbjct: 23 NESRIALFLDFENLVTNTGISTAGFDLQPSLDRLLEKGKVVFRRAYC--------DWSRF 74 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFS 120 LH +G ++V + K+ D+ L +DA E E ++ VI S Sbjct: 75 SDAKGRLHEHGVELVDVP-------PSTRAGKNGADMRLVIDALELCYAREHIDTFVIAS 127 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 GD F L L+ + V ++ S + D F+ L Sbjct: 128 GDSDFCPLAYKLRENGRTVIGLA----VKESTSPLFVKACDEFLYL 169 >gi|87302148|ref|ZP_01084973.1| hypothetical protein WH5701_08104 [Synechococcus sp. WH 5701] gi|87283073|gb|EAQ75029.1| hypothetical protein WH5701_08104 [Synechococcus sp. WH 5701] Length = 260 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 42/177 (23%), Positives = 84/177 (47%), Gaps = 13/177 (7%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFR--SRAIVIRAYYYTTVVGDPEQQFSPLH 64 ++ + +DG ++ + + LG+ D R+LL+ + AY+YT + +Q Sbjct: 52 RVVI-VDGHGMFYAQQKLGWFFDPRRLLELATADPGVELDGAYWYTGLKDPADQ-----R 105 Query: 65 PLLDWLHYNGFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 P D L G+ V +K +EF + R+ ++++DVE+ +D + L+ + + SG Sbjct: 106 PFRDALTSLGYTVRSKPLREFGADPEHRQFARANLDVEICLDLMMVAHRLDEVWLLSGSR 165 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 LV L+ K ++T++ + M +LR D F+DLA + ++ + Sbjct: 166 DLERLVETLRAKGIRITLL----NADGMVPRELRNAVDVFLDLAGRRKQLEKAEAAQ 218 >gi|146300165|ref|YP_001194756.1| hypothetical protein Fjoh_2410 [Flavobacterium johnsoniae UW101] gi|146154583|gb|ABQ05437.1| hypothetical protein Fjoh_2410 [Flavobacterium johnsoniae UW101] Length = 259 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 29/178 (16%), Positives = 53/178 (29%), Gaps = 29/178 (16%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 K+A+ ID N+ S + + +++ Y + Sbjct: 7 KDLKLAVLIDADNVPYS--------NVKGMMEEIAKFGTPTTKRIYADWTKPNANGWKA- 57 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSG 121 + ++++ G K+S D L +DA + S L+ I S Sbjct: 58 ---------VLLEHAITPIQQYSYTVG----KNSSDSALIIDAMDLLYSGKLDGFCIVSS 104 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 D FT L L+ KV + D F+ + L I + + Sbjct: 105 DSDFTRLAVRLRESGMKVIGIGEKK-----TPSSFIVACDRFIYIEVLDGAIQKKKPK 157 >gi|295133849|ref|YP_003584525.1| hypothetical protein ZPR_2004 [Zunongwangia profunda SM-A87] gi|294981864|gb|ADF52329.1| conserved hypothetical protein [Zunongwangia profunda SM-A87] Length = 246 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 28/177 (15%), Positives = 60/177 (33%), Gaps = 32/177 (18%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +A+ IDG N+ ++ +++++ Y ++ Sbjct: 5 LAVLIDGDNIPSAY--------VKEMMEEIAKHGNPTIKRIYGDWTNPHLSKWKS----- 51 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDGCF 125 + +++ G + K++ D + +DA + S ++ + S D F Sbjct: 52 -----VLLENAISPIQQY----GYTQGKNATDSAMIIDAMDILYSNKVDGFCLVSSDSDF 102 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182 T L L+ K+V + D D F+ L LK +D +E + Sbjct: 103 TRLATRLREAGKRVIGIGEKK-----TPDPFIVACDRFIYLEILK---TKDKEEQPE 151 >gi|319953532|ref|YP_004164799.1| hypothetical protein Celal_2004 [Cellulophaga algicola DSM 14237] gi|319422192|gb|ADV49301.1| Domain of unknown function DUF88 [Cellulophaga algicola DSM 14237] Length = 252 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 28/183 (15%), Positives = 61/183 (33%), Gaps = 29/183 (15%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 D +A+ IDG N+ ++ +++++ Y ++ Sbjct: 1 MDSNINLAVLIDGDNIPSAQ--------VKEMMEEIAKYGNPTIKRIYGDWTKPNLTKWK 52 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIF 119 + +++ G K++ D + +DA + SE + + Sbjct: 53 ----------NLLLENAITPIQQYGYTTG----KNATDSAMIIDAMDILYSEKVNGFCLV 98 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 S D FT L L+ KV + + D F+ + LK++I ++ Sbjct: 99 SSDSDFTRLATRLREAGMKVIGIGEKKTPNP-----FIVACDKFIYIEILKSKIESPEND 153 Query: 180 DKK 182 +K Sbjct: 154 SEK 156 >gi|119493449|ref|ZP_01624118.1| hypothetical protein L8106_08531 [Lyngbya sp. PCC 8106] gi|119452693|gb|EAW33872.1| hypothetical protein L8106_08531 [Lyngbya sp. PCC 8106] Length = 157 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 44/163 (26%), Positives = 84/163 (51%), Gaps = 13/163 (7%) Query: 17 LYASSKALGFDIDYRKLLKAFRSRA---IVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYN 73 ++ + + G+ D R++L F+ I++ A++YT + D L Sbjct: 1 MFYAQQKNGWFFDPRRVLTYFKHEQSDVILVNAFWYTGLKDP-----QDQRGFRDALISL 55 Query: 74 GFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAAL 132 G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +V+FSGDG F + L Sbjct: 56 GYTVRTKILKEYYDDSSGRYSQKANLDIEIVVDMFNTVDQYDRVVLFSGDGDFERAIELL 115 Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 + K +T+VST M + +LR D ++DL ++++I + Sbjct: 116 RSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDQIEK 154 >gi|113474390|ref|YP_720451.1| hypothetical protein Tery_0526 [Trichodesmium erythraeum IMS101] gi|110165438|gb|ABG49978.1| protein of unknown function DUF88 [Trichodesmium erythraeum IMS101] Length = 295 Score = 111 bits (278), Expect = 4e-23, Method: Composition-based stats. Identities = 47/170 (27%), Positives = 79/170 (46%), Gaps = 13/170 (7%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 + + L ID ANL ++K+L +DY +L + + A Y S Sbjct: 137 QRRTLLAIDSANLDGAAKSLNMKVDYERLKRYVNVHFGSLEARIYVGK----YDNSSRQK 192 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 ++L NG+ V K + VK+++DV+LA+D E +++V+ SGDG Sbjct: 193 LWFNYLEKNGYVVKTKPVTVYGNT-----VKANVDVDLALDIREHGVNFKNVVLCSGDGD 247 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 + LV LQ KV +++ P + L+RQAD ++ L + EI+ Sbjct: 248 YLPLVEQLQGLGIKVIVLA----SPGHTNHFLQRQADEYISLIDIMGEIS 293 >gi|121596033|ref|YP_987929.1| hypothetical protein Ajs_3744 [Acidovorax sp. JS42] gi|120608113|gb|ABM43853.1| protein of unknown function DUF88 [Acidovorax sp. JS42] Length = 287 Score = 111 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 35/174 (20%), Positives = 57/174 (32%), Gaps = 29/174 (16%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M + + +IAL ID N A ID ++L + + Y + Sbjct: 1 MAERQLRIALLIDADN------APADKID--EILTELSTLGEINVRRAYGNWTKSGLGGW 52 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118 + + ++F + K++ D+ + VDA E SE + I Sbjct: 53 QQRL----------LEFAIRPIQQFDYSK----RKNATDMAMTVDAMELLYSERPDAFGI 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 S D FT LV L+ K V + F+ L L +E Sbjct: 99 VSSDADFTPLVMHLRAKGSAVYGFGAAQTPKP-----FVNACSRFLYLESLVSE 147 >gi|328949646|ref|YP_004366981.1| Domain of unknown function DUF88 [Marinithermus hydrothermalis DSM 14884] gi|328449970|gb|AEB10871.1| Domain of unknown function DUF88 [Marinithermus hydrothermalis DSM 14884] Length = 174 Score = 111 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 41/169 (24%), Positives = 79/169 (46%), Gaps = 12/169 (7%) Query: 5 REKIALFIDGANLYA---SSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 ++IA+F+DG+NLY S+ + +D+ + +++ + ++RAYYY + + Sbjct: 1 MDRIAIFMDGSNLYKGLVSTLGPDYRLDFVRFIESLVAGRKLLRAYYYNAPLPSEDPASK 60 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIF 119 L++L + V E G V+ +D+++AVD + + V+ Sbjct: 61 AHQSFLNYLKRVPYVAVRLGRLERR---GDTFVEKGVDIQIAVDMLRLAYARAYDVAVLV 117 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 SGDG F +V +Q +V + +++S +L +QAD F L Sbjct: 118 SGDGDFAEVVRVVQDMGMQV----ENTTFQALSSYRLAQQADRFYPLDD 162 >gi|332884085|gb|EGK04365.1| hypothetical protein HMPREF9456_01393 [Dysgonomonas mossii DSM 22836] Length = 252 Score = 111 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 24/184 (13%), Positives = 57/184 (30%), Gaps = 30/184 (16%) Query: 1 MFDPRE-KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 M + R+ +A+ ID N+ S + + +L + Y Sbjct: 1 MIEKRDLNLAVLIDADNVPYS--------NIKGMLDEIAKIGVPTIKRIYGDWTKPSVSG 52 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLV 117 + + ++++ G K++ D + +DA + ++ Sbjct: 53 WKQPL----------LEHAITPIQQYSYTTG----KNATDSAMIIDAMDILHGGRVDGFC 98 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 + S D FT L L+ +V + + D F+ + +++ + Sbjct: 99 LVSSDSDFTRLAVRLRESGMQVIGIGEKKTPSP-----FIVACDKFIYIEIIRDSDDNNE 153 Query: 178 DEDK 181 E Sbjct: 154 TESP 157 >gi|260432079|ref|ZP_05786050.1| protein containing DUF88 [Silicibacter lacuscaerulensis ITI-1157] gi|260415907|gb|EEX09166.1| protein containing DUF88 [Silicibacter lacuscaerulensis ITI-1157] Length = 238 Score = 111 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 30/184 (16%), Positives = 63/184 (34%), Gaps = 29/184 (15%) Query: 1 MFDPR-EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 M + E++A+ ID N+ +K + ++ + + Y G Q Sbjct: 1 MTNTTTERLAVLIDAENVP--AKHV------AEIFEEVATLGEASLRRIYGDFSGGTPQG 52 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLV 117 +S + ++F G K++ D+ L +DA + S + V Sbjct: 53 WSAEKL---------AEYAIVPHQQFANTTG----KNAGDIALVIDAMDILHSGRFDGFV 99 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 + S D FT L + ++ + +V + + F+ + +K E + Sbjct: 100 LVSSDSDFTRLASRIREQGLRVYGIGERK-----TPKAFVAACNRFILIENIKKESSNGE 154 Query: 178 DEDK 181 K Sbjct: 155 KTKK 158 >gi|255280264|ref|ZP_05344819.1| conserved hypothetical protein [Bryantella formatexigens DSM 14469] gi|255269355|gb|EET62560.1| conserved hypothetical protein [Bryantella formatexigens DSM 14469] Length = 349 Score = 111 bits (277), Expect = 5e-23, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 60/182 (32%), Gaps = 29/182 (15%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M + E+ AL ID N+ S+K + +L V Y + Sbjct: 1 MKENEERYALLIDADNV--SAKY------IKPILDELSKYGNVTYKRIYGDWTSTQHASW 52 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVI 118 Q ++++ G K++ D + +DA + + ++ + Sbjct: 53 K----------EVLLQNSISPIQQYSYTQG----KNATDSAMIIDAMDILYTGNVDGFCL 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 S D FT L + L+ + V + + R+ + F L L + + + Sbjct: 99 VSSDSDFTRLASRLRESGQNVIGMGEAKTPIP-----FRQACNIFTTLELLLEDSTSEKE 153 Query: 179 ED 180 E Sbjct: 154 EK 155 >gi|153004596|ref|YP_001378921.1| hypothetical protein Anae109_1734 [Anaeromyxobacter sp. Fw109-5] gi|152028169|gb|ABS25937.1| protein of unknown function DUF88 [Anaeromyxobacter sp. Fw109-5] Length = 249 Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats. Identities = 38/166 (22%), Positives = 60/166 (36%), Gaps = 22/166 (13%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 ++IALFID NL + D + L A + V+ Y ++ Sbjct: 7 HDQRIALFIDFENLVTRTGLSAETFDLQPALDALLEKGKVVFRRAYA--------DWTRF 58 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFS 120 LH G ++V + K+ DV L +DA E + E ++ VI S Sbjct: 59 AEATQRLHDKGVELVDVP-------PSTRAGKNGADVRLVIDALELAYLREHIDTFVIAS 111 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 GD F L L+ + V ++ S + D F+ L Sbjct: 112 GDSDFCPLAYKLRENDRNVIGMA----VREATSPLFVKACDQFIYL 153 >gi|330824578|ref|YP_004387881.1| hypothetical protein Alide2_1990 [Alicycliphilus denitrificans K601] gi|329309950|gb|AEB84365.1| Domain of unknown function DUF88 [Alicycliphilus denitrificans K601] Length = 239 Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats. Identities = 29/173 (16%), Positives = 51/173 (29%), Gaps = 29/173 (16%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M ++A+ ID N A+ ++LL+ + Y + Sbjct: 1 MAQDALRLAVLIDADNASAAV--------IKELLEEVAKYGVATVKRSYGDWTTQNLVGW 52 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118 + + ++F G K+S D +DA + ++ + Sbjct: 53 KDHLH----------RHAIQPMQQFAYTKG----KNSTDSACIIDAMDLLYGGNVDGFCL 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 S D FT L L+ K V D D F+ + LK Sbjct: 99 VSSDSDFTRLATRLREAGKVVYGFGERK-----TPDAFIAACDKFVFVEVLKQ 146 >gi|328951205|ref|YP_004368540.1| Domain of unknown function DUF88 [Marinithermus hydrothermalis DSM 14884] gi|328451529|gb|AEB12430.1| Domain of unknown function DUF88 [Marinithermus hydrothermalis DSM 14884] Length = 186 Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats. Identities = 44/177 (24%), Positives = 83/177 (46%), Gaps = 16/177 (9%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 E+I LFIDG+ +Y+++K +G+++D+R++L+ FR + A+YY + ++ Sbjct: 1 MERIGLFIDGSYIYSAAKRMGWNVDHRRVLEHFRGDRALYNAFYYAPITDPNDE---RQL 57 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 LD L + G+ V + + + N G V L D + E +I SG Sbjct: 58 KFLDALVFMGYTVRSHEVRGESPNLG---------VYLVTDLLLTAPRWEVALISSGARE 108 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 V A++ K+V ++ P + +LR +D F+D+ + + R P + Sbjct: 109 IAPAVEAVRAMGKEVRLL----GLPELTDLELRSSSDRFIDIREYREVLERQPGGRR 161 >gi|312879353|ref|ZP_07739153.1| protein of unknown function DUF88 [Aminomonas paucivorans DSM 12260] gi|310782644|gb|EFQ23042.1| protein of unknown function DUF88 [Aminomonas paucivorans DSM 12260] Length = 289 Score = 110 bits (276), Expect = 7e-23, Method: Composition-based stats. Identities = 26/177 (14%), Positives = 49/177 (27%), Gaps = 29/177 (16%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +A+ ID N + LL + Y + Sbjct: 53 LAVLIDADNANPAI--------IEGLLGEVAKYGVASVKRIYGDWTTPQLGSWKT----- 99 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCF 125 + ++F G K++ D + +DA + + + + S D F Sbjct: 100 -----VLLEYSIHPVQQFRYTVG----KNATDSAMIIDAMDLLYTGRFDGFCLVSSDSDF 150 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182 T L + ++ + K+V D F+ L E R +K Sbjct: 151 TRLASRIREEGKRVVGFGEKK-----TPRAFVSACDKFIYTELLVAETGRGGTAVRK 202 >gi|260914714|ref|ZP_05921179.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325] gi|260631218|gb|EEX49404.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325] Length = 261 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 29/174 (16%), Positives = 56/174 (32%), Gaps = 30/174 (17%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + +++A+ ID N AS++ D + +L+ Y V Q Sbjct: 11 IEESTKRLAVLIDADN--ASAR------DIKAILEEVTKYGEATVKRIYGNFVSTNGQWK 62 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118 ++ K ++F G K++ D + +DA + + + I Sbjct: 63 ETINQY-----------AIKPMQQFAFTTG----KNATDGFMIIDAMDLLYTNRFDGFCI 107 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 S D FT L L+ V R F+ + L ++ Sbjct: 108 VSSDSDFTALAIRLKEHGATVYGFG-----KKQTPLAFRNACSRFIYVENLHDD 156 >gi|119357877|ref|YP_912521.1| hypothetical protein Cpha266_2085 [Chlorobium phaeobacteroides DSM 266] gi|119355226|gb|ABL66097.1| conserved hypothetical protein [Chlorobium phaeobacteroides DSM 266] Length = 249 Score = 110 bits (275), Expect = 8e-23, Method: Composition-based stats. Identities = 25/177 (14%), Positives = 51/177 (28%), Gaps = 29/177 (16%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 + +++A+ ID N S LL Y + + Sbjct: 4 EKSDRLAVLIDADNTQPSI--------IEGLLAEIAKYGTANVKRIYGDWTSTSLRGWK- 54 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 + + ++F G K++ D + +DA + + I S Sbjct: 55 ---------EILLEHSIQPIQQFGYTKG----KNATDSAMIIDAMDLLYTGKFHGFCIVS 101 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 D FT L + ++ V + S D F+ L+ + + + Sbjct: 102 SDSDFTKLASRIRESGLTVYGFGEKKTPSPFVS-----ACDKFIYTEVLRAKTSENE 153 >gi|662866|emb|CAA87004.1| orf1 [Nostoc sp. PCC 7120] Length = 157 Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats. Identities = 43/165 (26%), Positives = 82/165 (49%), Gaps = 13/165 (7%) Query: 17 LYASSKALGFDIDYRKLLKAFRSRA---IVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYN 73 ++ + + D R++L+ F++ +I A++YT + D L Sbjct: 1 MFYAQQNEWVVFDPRRVLEYFKNEQSETTLINAFWYTGLKDP-----QDQRGFRDALISL 55 Query: 74 GFQVVAKVAKEFTE-NCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAAL 132 G+ V K+ KE+ + + GR K+++D+E+ VD F + + +V+FSGDG F + L Sbjct: 56 GYTVRTKILKEYCDDSSGRYSQKANLDIEIVVDMFNTVDQYDRVVLFSGDGDFERAIELL 115 Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 + K +T+VST M + +LR D ++DL +++ I + Sbjct: 116 RSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDRIEKAE 156 >gi|34495828|ref|NP_900043.1| hypothetical protein CV_0373 [Chromobacterium violaceum ATCC 12472] gi|34101683|gb|AAQ58051.1| conserved hypothetical protein [Chromobacterium violaceum ATCC 12472] Length = 297 Score = 110 bits (275), Expect = 9e-23, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 48/168 (28%), Gaps = 28/168 (16%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 K+A+ ID N +S +LL I Y + + Sbjct: 3 NRKLAVLIDADNAQSSL--------IAELLAEVAKYGTAIVKRAYGDWTTTQLKGWK--- 51 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122 Q ++F G K+S D L +DA + + + + S D Sbjct: 52 -------EVLHQYAISPIQQFAYTKG----KNSTDSALIIDAMDLLYTGNFDGFCLVSSD 100 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 FT L L+ V + S D F+ L+ Sbjct: 101 SDFTRLATRLREGGLTVIGLGE----QSKTPRPFIAACDKFVFTEILR 144 >gi|21233195|ref|NP_639112.1| hypothetical protein XCC3767 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66770137|ref|YP_244899.1| hypothetical protein XC_3839 [Xanthomonas campestris pv. campestris str. 8004] gi|21115046|gb|AAM43024.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66575469|gb|AAY50879.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. 8004] Length = 277 Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats. Identities = 29/172 (16%), Positives = 52/172 (30%), Gaps = 29/172 (16%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 +P ++IAL ID N A +L + Y + + Sbjct: 4 NPDKRIALLIDADNAPAG--------KIDVVLAEVARYGVANVRRAYGNWKSPHLKSW-- 53 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 + + ++F + G K++ D+ + +DA + + L+ I S Sbjct: 54 --------EAALHEYAIRPIQQFAYSSG----KNASDMAMVIDAMDLLYARNLDGFAIVS 101 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 D FT LV L KV + F + L + Sbjct: 102 SDADFTPLVMRLLTDGMKVYGFGEKKTPAP-----FVNACSKFTYVEALGEQ 148 >gi|145241746|ref|XP_001393519.1| hypothetical protein ANI_1_1160084 [Aspergillus niger CBS 513.88] gi|134078059|emb|CAK40142.1| unnamed protein product [Aspergillus niger] Length = 253 Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 28/169 (16%), Positives = 46/169 (27%), Gaps = 29/169 (17%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 D K A+ ID N S LL Y ++ Sbjct: 4 DSVPKFAVLIDADNAAYSV--------IHPLLAEIARYGTAHAKRAYGDWSSPNLTRWKD 55 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 Q + ++F G K+S D + +DA + + + + S Sbjct: 56 QL----------LQHSIEPIQQFAYTYG----KNSTDSAMIIDAMDLLYTRRYDGFCLVS 101 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 D FT L A ++ V + + D F+ L Sbjct: 102 SDSDFTRLAARIRESGLVVYGFGEQKTPKPFVA-----ACDKFIYTENL 145 >gi|297567250|ref|YP_003686222.1| hypothetical protein Mesil_2873 [Meiothermus silvanus DSM 9946] gi|296851699|gb|ADH64714.1| protein of unknown function DUF88 [Meiothermus silvanus DSM 9946] Length = 213 Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 41/169 (24%), Positives = 82/169 (48%), Gaps = 17/169 (10%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 +IALFIDG+ +Y ++K LG+++D+R+++ F + + A+YY + +++ Sbjct: 6 RIALFIDGSYMYNAAKRLGWNVDHRRVIGQFATPEELYNAFYYAPITDSEDERQQK---F 62 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126 LD L + G+ V ++ + + + +A D + + V+ SG G Sbjct: 63 LDALVFMGYTVRSREVR----------GEPRFEALIATDMLITAPRWDRAVVASGAGELA 112 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 + AL+ + K++ +V + LR QAD F+DL ++ + R Sbjct: 113 HALGALRAQGKELYLV----GVAELTDLWLRNQADRFLDLRDMREGLER 157 >gi|239918004|ref|YP_002957562.1| conserved hypothetical protein TIGR00288 [Micrococcus luteus NCTC 2665] gi|281415820|ref|ZP_06247562.1| hypothetical protein MlutN2_11509 [Micrococcus luteus NCTC 2665] gi|239839211|gb|ACS31008.1| conserved hypothetical protein TIGR00288 [Micrococcus luteus NCTC 2665] Length = 371 Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 31/175 (17%), Positives = 53/175 (30%), Gaps = 34/175 (19%) Query: 1 MFDPRE---KIALFIDGANLYASSKALGFDIDYRKL-LKAFRSRAIVIRAYYYTTVVGDP 56 M +P +IA+ +D N+ + L L+ + Y Sbjct: 1 MPEPTPASLRIAVLMDSDNV---------SPKFAPLILEELATYGTPTIKRAYGDWTTTN 51 Query: 57 EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLE 114 + + ++F G K+S D L +DA + ++ Sbjct: 52 LNGWKKALNHHA----------IQPVQQFAYTVG----KNSSDSALIIDAMDLLWMGNVD 97 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 + S D FT L L+ K+V + LR D F+ L L Sbjct: 98 AFALVSSDSDFTRLATRLREGGKRVIGLGARK-----TPASLRNAVDQFIYLELL 147 >gi|145219215|ref|YP_001129924.1| hypothetical protein Cvib_0400 [Prosthecochloris vibrioformis DSM 265] gi|145205379|gb|ABP36422.1| conserved hypothetical protein [Chlorobium phaeovibrioides DSM 265] Length = 247 Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 29/182 (15%), Positives = 53/182 (29%), Gaps = 29/182 (15%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 + E++A+ ID N S LL Y + + Sbjct: 4 EKSERLAVLIDADNTQPSI--------IEGLLAEIAKYGTSNVKRIYGDWTSTALKGWK- 54 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 + + ++F G R K++ D + +DA + + I S Sbjct: 55 ---------EVLLEFSIQPIQQF----GYTRGKNATDSAMIIDAMDLLYTGRFNGFCIVS 101 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 D FT L ++ V + S D F+ L+ +I + Sbjct: 102 SDSDFTKLAVRIRESGLIVYGFGEKKTPAPFVS-----ACDKFIYTEVLREKINENETIK 156 Query: 181 KK 182 +K Sbjct: 157 RK 158 >gi|193222199|emb|CAL60349.2| Conserved hypothetical protein [Herminiimonas arsenicoxydans] Length = 267 Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 29/172 (16%), Positives = 49/172 (28%), Gaps = 29/172 (16%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 D ++A+ ID N A+ LL Y + Sbjct: 14 DSTLRLAVLIDADNAQAAV--------IEGLLAEIARFGEATVKRIYGDFTAPTSASWKK 65 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 + Q K ++F G K++ D L +DA + + + + + Sbjct: 66 VLQ----------QYAIKPVQQFAYTTG----KNATDSTLIIDAMDLLYTRKFDGFCLIT 111 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 D FT L L+ + V D R F+ L+ E Sbjct: 112 SDSDFTGLAMRLREEGLTVLGFGEKK-----TPDAFRNACHKFIFTEVLRPE 158 >gi|67924850|ref|ZP_00518246.1| hypothetical protein CwatDRAFT_1822 [Crocosphaera watsonii WH 8501] gi|67853309|gb|EAM48672.1| hypothetical protein CwatDRAFT_1822 [Crocosphaera watsonii WH 8501] Length = 235 Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 25/181 (13%), Positives = 53/181 (29%), Gaps = 31/181 (17%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 ++A+ ID N+ A+ LL+ Y + Sbjct: 9 SNTRLAVLIDAENVSANI--------IEHLLQEVAKYGTANVKRIYGDWTNSQLNSWKSK 60 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSG 121 ++ + ++F G K++ D L +DA + + + + S Sbjct: 61 LN----------KLALQPIQQFRYTTG----KNATDSALIIDAMDLLYTNNFDGFCLVSS 106 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 D FT L + ++ V + + F+ L + P ++ Sbjct: 107 DSDFTRLASRIRESGLIVYGFGE----KVKTPEAFVVACNKFIYTDILAY---KQPSGNQ 159 Query: 182 K 182 K Sbjct: 160 K 160 >gi|134093403|ref|YP_001098478.1| hypothetical protein HEAR0113 [Herminiimonas arsenicoxydans] Length = 258 Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 29/172 (16%), Positives = 49/172 (28%), Gaps = 29/172 (16%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 D ++A+ ID N A+ LL Y + Sbjct: 5 DSTLRLAVLIDADNAQAAV--------IEGLLAEIARFGEATVKRIYGDFTAPTSASWKK 56 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 + Q K ++F G K++ D L +DA + + + + + Sbjct: 57 VLQ----------QYAIKPVQQFAYTTG----KNATDSTLIIDAMDLLYTRKFDGFCLIT 102 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 D FT L L+ + V D R F+ L+ E Sbjct: 103 SDSDFTGLAMRLREEGLTVLGFGEKK-----TPDAFRNACHKFIFTEVLRPE 149 >gi|149922564|ref|ZP_01910994.1| hypothetical protein PPSIR1_41429 [Plesiocystis pacifica SIR-1] gi|149816591|gb|EDM76086.1| hypothetical protein PPSIR1_41429 [Plesiocystis pacifica SIR-1] Length = 264 Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 64/181 (35%), Gaps = 23/181 (12%) Query: 6 EKIALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 IA++ D N+ + G+D D +L+ R V+ Y + Sbjct: 9 PNIAVYADYENVALGAIEAGYDAFDIALVLERLLERGNVVVRKAYC--------DWVRYK 60 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLEHLVIFSG 121 LH F++V + + K+S D+ L VDA + + + + +G Sbjct: 61 GERKRLHERSFELVEVPHVKLSG-------KNSADIRLVVDALDLAHTKAHVGVFALLTG 113 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 D F+ LV+ L+ K V V S L D F+ L + RD Sbjct: 114 DSDFSPLVSKLRENGKWVVGV----GVRQSTSKLLVEICDEFIYYDDLVRDKRRDGQRRA 169 Query: 182 K 182 + Sbjct: 170 R 170 >gi|126656067|ref|ZP_01727451.1| hypothetical protein CY0110_03254 [Cyanothece sp. CCY0110] gi|126622347|gb|EAZ93053.1| hypothetical protein CY0110_03254 [Cyanothece sp. CCY0110] Length = 235 Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 23/168 (13%), Positives = 50/168 (29%), Gaps = 28/168 (16%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 ++A+ ID N+ A+ LL+ Y + + Sbjct: 12 RLAVLIDAENVSANI--------IEPLLQEVAKYGTANVKRIYGDWTSNQLNSWKSKLN- 62 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124 ++ + ++F G K++ D L +DA + + + + S D Sbjct: 63 ---------KLALQPIQQFRYTTG----KNATDSALIIDAMDLLYTNNFDGFCLVSSDSD 109 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 FT L + ++ V + F+ L ++ Sbjct: 110 FTRLASRIRESGLIVYGFGE----KIKTPEAFVVACSKFIYTDILAHQ 153 >gi|325913823|ref|ZP_08176182.1| hypothetical protein XVE_0042 [Xanthomonas vesicatoria ATCC 35937] gi|325539898|gb|EGD11535.1| hypothetical protein XVE_0042 [Xanthomonas vesicatoria ATCC 35937] Length = 277 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 29/172 (16%), Positives = 51/172 (29%), Gaps = 29/172 (16%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 +P ++IAL ID N A +L + Y + + Sbjct: 4 NPDKRIALLIDADNAPAG--------KIDVVLAEVARYGVANVRRAYGNWKSPHLKGW-- 53 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 + ++F + G K++ D+ + +DA + + L+ I S Sbjct: 54 --------EAALHDYAIRPIQQFAYSSG----KNASDMAMVIDAMDLLYARNLDGFAIVS 101 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 D FT LV L KV + F + L + Sbjct: 102 SDADFTPLVMRLLTDGMKVYGFGEKKTPAP-----FVNACSKFTYVEALGEQ 148 >gi|313676381|ref|YP_004054377.1| hypothetical protein Ftrac_2290 [Marivirga tractuosa DSM 4126] gi|312943079|gb|ADR22269.1| hypothetical protein Ftrac_2290 [Marivirga tractuosa DSM 4126] Length = 242 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 26/177 (14%), Positives = 57/177 (32%), Gaps = 29/177 (16%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +A+ IDG N+ ++ + +++++ Y ++ Sbjct: 5 LAVLIDGDNIPSA--------NVKEMMEEIAKYGNPTIKRIYGDWTKPNLSKWK------ 50 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDGCF 125 + +++ G K++ D + +DA + S+ + + S D F Sbjct: 51 ----NLLLENAITPIQQYGYTTG----KNATDSAMIIDAMDILYSQKVHGFCLVSSDSDF 102 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182 T L L+ KV + + D F+ + L N+ D K Sbjct: 103 TRLATRLREAGMKVYGIGEKKTPNP-----FIVACDKFIYIEILNNQAEETEDTKSK 154 >gi|289705143|ref|ZP_06501547.1| conserved hypothetical protein [Micrococcus luteus SK58] gi|289558171|gb|EFD51458.1| conserved hypothetical protein [Micrococcus luteus SK58] Length = 360 Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 53/175 (30%), Gaps = 34/175 (19%) Query: 1 MFDPRE---KIALFIDGANLYASSKALGFDIDYRKL-LKAFRSRAIVIRAYYYTTVVGDP 56 M DP +IA+ +D N+ + L L+ + Y Sbjct: 1 MPDPTPASLRIAVLMDSDNV---------SPKFAPLILEELATYGTPTIKRAYGDWTTTN 51 Query: 57 EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLE 114 + + ++F G K+S D L +DA + ++ Sbjct: 52 LNGWKKALNHHA----------IQPVQQFAYTVG----KNSSDSALIIDAMDLLWMGNVD 97 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 + S D FT L L+ K+V + LR D F+ L L Sbjct: 98 AFALVSSDSDFTRLATRLREGGKRVIGLGARK-----TPASLRNAVDQFIYLELL 147 >gi|172035458|ref|YP_001801959.1| hypothetical protein cce_0542 [Cyanothece sp. ATCC 51142] gi|171696912|gb|ACB49893.1| hypothetical protein cce_0542 [Cyanothece sp. ATCC 51142] Length = 235 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 25/178 (14%), Positives = 55/178 (30%), Gaps = 31/178 (17%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 ++A+ ID N+ A+ LL+ Y + + Sbjct: 12 RLAVLIDAENVSANI--------IEALLQEVAKYGTANVKRIYGDWTSNQLNSWKGKLN- 62 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124 ++ + ++F G K++ D L +DA + + + + S D Sbjct: 63 ---------KLALQPIQQFRYTTG----KNATDSALIIDAMDLLYTGNFDGFCLVSSDSD 109 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182 FT L + ++ V + + F+ L + + P ++K Sbjct: 110 FTRLASRIRESGLIVYGFGE----KIKTPEAFVVACNKFIYTDILAH---QQPSGNEK 160 >gi|260775864|ref|ZP_05884760.1| hypothetical protein VIC_001249 [Vibrio coralliilyticus ATCC BAA-450] gi|260608280|gb|EEX34449.1| hypothetical protein VIC_001249 [Vibrio coralliilyticus ATCC BAA-450] Length = 290 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 66/185 (35%), Gaps = 34/185 (18%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +KIA+ ID N S +++ S ++ Y + + + Sbjct: 45 NKKIAVLIDSDNTPHS--------KLAAIIEELSSFGHIVVKRAYGDFSSERLKNWKQPL 96 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122 ++ + ++F G K++ D + +DA + S+ + + S D Sbjct: 97 N----------ELAIQAKQQFAYTSG----KNATDSLMIIDAMDLLYSQRFDAFALISSD 142 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK-----NEIARDP 177 FT+L L+ V V +M + D F+ + L+ ++ R P Sbjct: 143 SDFTSLATRLRESEIHVIGVG-----KAMTPSSFKNACDDFVAIENLQGATEVDDAQRRP 197 Query: 178 DEDKK 182 +++ + Sbjct: 198 NQNAE 202 >gi|115360984|ref|YP_778121.1| hypothetical protein Bamb_6243 [Burkholderia ambifaria AMMD] gi|115286312|gb|ABI91787.1| protein of unknown function DUF88 [Burkholderia ambifaria AMMD] Length = 272 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 38/165 (23%), Positives = 77/165 (46%), Gaps = 13/165 (7%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA-IVIRAYYYTTVVGDPEQQ---- 59 ++ +++DG+++ A+ L + Y L + R + Y + + Sbjct: 4 MRRVGVYVDGSSMDANGGHL---MRYEVLRSLAGRAGATIQRLHAYLSFDERRAARSPDY 60 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119 + + L GF+V K + + ++ G + VKS+ D+ +A+DA +S+ L+ ++I Sbjct: 61 DARIKGYQAALRDKGFRVTIKPLRHYADDDGTETVKSNSDLGMAIDALSESDRLDTVLIA 120 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 + DG F +V ALQ+K +V ++ +LR AD F+ Sbjct: 121 TSDGDFVEVVRALQKKGCRVEVLGFD-----NVPLELREAADQFI 160 >gi|320451037|ref|YP_004203133.1| hypothetical protein TSC_c19750 [Thermus scotoductus SA-01] gi|320151206|gb|ADW22584.1| hypothetical protein TSC_c19750 [Thermus scotoductus SA-01] Length = 182 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 37/170 (21%), Positives = 83/170 (48%), Gaps = 17/170 (10%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 ++ALFIDG+ +Y ++K LG+++D+R++L F + + A+YY + +++ Sbjct: 2 RVALFIDGSYMYLATKRLGWNVDHRRVLTQFATPEQLYNAFYYVPITDPEDERQQR---F 58 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126 +D L + G+ V +++ + ++ + +A D + + ++ SG G Sbjct: 59 IDALVFMGYTVRSRLVR----------GEARFEAMMATDLLTTAPRWDRAIVASGSGELA 108 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 + L+ K++ ++ +A +LR QAD F++L + + R Sbjct: 109 HTFSTLRAMGKEIHLL----GVHELADLELRNQADRFLNLPEWREVLERT 154 >gi|289664829|ref|ZP_06486410.1| hypothetical protein XcampvN_17615 [Xanthomonas campestris pv. vasculorum NCPPB702] gi|289671395|ref|ZP_06492470.1| hypothetical protein XcampmN_23667 [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 276 Score = 109 bits (272), Expect = 2e-22, Method: Composition-based stats. Identities = 29/172 (16%), Positives = 51/172 (29%), Gaps = 29/172 (16%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 +P ++IAL ID N A +L + Y + + Sbjct: 6 NPDKRIALLIDADNAPAG--------KIDVVLAEVARYGVANVRRAYGNWKSPHLKGW-- 55 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 + ++F + G K++ D+ + +DA + + L+ I S Sbjct: 56 --------EAALHDYAIRPIQQFAYSSG----KNASDMAMVIDAMDLLYARNLDGFAIVS 103 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 D FT LV L KV + F + L + Sbjct: 104 SDADFTPLVMRLLTDGMKVYGFGEKKTPAP-----FVNACSKFTYVEALGEQ 150 >gi|313681619|ref|YP_004059357.1| hypothetical protein Sulku_0490 [Sulfuricurvum kujiense DSM 16994] gi|313154479|gb|ADR33157.1| protein of unknown function DUF88 [Sulfuricurvum kujiense DSM 16994] Length = 246 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 27/172 (15%), Positives = 51/172 (29%), Gaps = 29/172 (16%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M D + ++A+ ID N S L+ + I Y + + Sbjct: 1 MIDDQARLAVLIDADNSQPSI--------IAGLMDEIAAHGIASVKRIYGDWTDTKLKGW 52 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118 + ++F G K++ D + +DA + ++ + I Sbjct: 53 K----------NALLEHGLHPMQQFAYTTG----KNATDSAMIIDAMDLLYTKNFDGFCI 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 S D FT L + ++ KV D F+ L+ Sbjct: 99 VSSDSDFTRLASRIRESGIKVYGFGEQK-----TPKAFIGVCDKFIYTENLR 145 >gi|114330619|ref|YP_746841.1| hypothetical protein Neut_0604 [Nitrosomonas eutropha C91] gi|114307633|gb|ABI58876.1| conserved hypothetical protein [Nitrosomonas eutropha C91] Length = 268 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 25/167 (14%), Positives = 47/167 (28%), Gaps = 29/167 (17%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 ++A+ ID N A+ LL Y + + Sbjct: 18 RLAVLIDADNAQAAV--------IEGLLAEIARFGEATVKRIYGDFTAPASASWKKVLQ- 68 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124 + K ++F G K++ D L +DA + + + + + D Sbjct: 69 ---------RHAIKPVQQFAYTTG----KNATDSTLIIDAMDLLYTRKFDGFCLITSDSD 115 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 FT L L+ + V + R F+ L+ Sbjct: 116 FTGLAMRLREEGLTVFGFGEKK-----TPEAFRNACHKFIFTEILRP 157 >gi|188993344|ref|YP_001905354.1| hypothetical protein xccb100_3949 [Xanthomonas campestris pv. campestris str. B100] gi|167735104|emb|CAP53316.1| Conserved hypothetical protein [Xanthomonas campestris pv. campestris] Length = 277 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 29/172 (16%), Positives = 52/172 (30%), Gaps = 29/172 (16%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 +P ++IAL ID N A +L + Y + + Sbjct: 4 NPDKRIALLIDADNAPAG--------KIDVVLAEVARYGVANVRRAYGNWKSPHLKSW-- 53 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 + + ++F + G K++ D+ + +DA + + L+ I S Sbjct: 54 --------EAALHEYAIRPIQQFAYSSG----KNASDMAMVIDAMDLLYARNLDGFAIVS 101 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 D FT LV L KV + F + L + Sbjct: 102 SDADFTPLVMRLLTDGMKVYGFGEKKTLAP-----FVNACSKFTYVEALGEQ 148 >gi|148550669|ref|YP_001260108.1| hypothetical protein Swit_5232 [Sphingomonas wittichii RW1] gi|148503088|gb|ABQ71341.1| protein of unknown function DUF88 [Sphingomonas wittichii RW1] Length = 284 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 29/170 (17%), Positives = 55/170 (32%), Gaps = 29/170 (17%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 P +IAL ID N+ + +L Y + ++ Sbjct: 11 PTRRIALLIDADNVSHA--------KIGAILAELSKYGTANIRRAYGNWAAATLKGWTGK 62 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSG 121 + ++F+ + G K++ D+ L +DA E ++ L+ I S Sbjct: 63 LHDFA----------IRPIQQFSYSTG----KNATDIALVIDAMELLYTQDLDAFAIASS 108 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 D FT L+ L+ +V + F+ L L++ Sbjct: 109 DADFTPLIMQLKANGHEVYGFGERKTPTP-----FVNACTTFLFLDGLED 153 >gi|317050842|ref|YP_004111958.1| hypothetical protein Selin_0654 [Desulfurispirillum indicum S5] gi|316945926|gb|ADU65402.1| hypothetical protein Selin_0654 [Desulfurispirillum indicum S5] Length = 290 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 42/165 (25%), Positives = 79/165 (47%), Gaps = 13/165 (7%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA-IVIRAYYYTTVVGDPEQQFSP 62 K+ +++D ANL + G+ + Y L + ++R Y + D + +P Sbjct: 17 SNAKVGVYVDVANL---VRNGGYGMRYEVLREFACRDGAELVRLNAYVSFDVDRASKDAP 73 Query: 63 LHP----LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVI 118 L G++V+ K K + + G + K++ D+++AVDA QSE L+ +++ Sbjct: 74 YKYKMTNFYAILRDFGYKVIEKPVKWYVDESGNRFGKANADLDMAVDALLQSENLDRVLL 133 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163 +GDG F +V ALQ K +V ++ S L++++D F Sbjct: 134 VTGDGDFVQVVRALQNKGCRVETMAF-----QNISSDLKKESDMF 173 >gi|224371902|ref|YP_002606068.1| hypothetical protein HRM2_48560 [Desulfobacterium autotrophicum HRM2] gi|223694621|gb|ACN17904.1| conserved hypothetical protein [Desulfobacterium autotrophicum HRM2] Length = 239 Score = 108 bits (271), Expect = 2e-22, Method: Composition-based stats. Identities = 32/183 (17%), Positives = 58/183 (31%), Gaps = 33/183 (18%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +K+A+ ID N AS + +LL + Y + + Sbjct: 6 NQKLAVMIDADNAQASICS--------ELLAEIAKFGVASVKRAYGDWTTSHLKGWKEHL 57 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGD 122 + + ++F+ G K+S D L +DA + L+ + S D Sbjct: 58 H----------KHAIQPIQQFSYTIG----KNSTDSSLIIDAMDLLHEQRLDGFCLVSSD 103 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE----IARDPD 178 FT L ++ V + D F+ L+ + I R+ D Sbjct: 104 SDFTRLATRIRESGLTVYGFGEKK-----TPEAFVSACDKFVYTEILRPQNKDNIPRESD 158 Query: 179 EDK 181 E + Sbjct: 159 ETE 161 >gi|320590086|gb|EFX02531.1| hypothetical protein CMQ_5892 [Grosmannia clavigera kw1407] Length = 261 Score = 108 bits (271), Expect = 3e-22, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 59/185 (31%), Gaps = 31/185 (16%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M + K+A+ ID N A +D LL Y G ++ Sbjct: 1 MANAT-KLAVLIDADN------APPTKVDL--LLAEVSKYGTAHVKRAYGDWTGQGLTKW 51 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118 N + + ++F G K++ D + +DA + + L+ I Sbjct: 52 K----------DNLLRHSIQPIQQFAYTQG----KNATDSAMIIDAMDLLYTNRLDGFCI 97 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL-KNEIARDP 177 S D FT L + ++ V + S D F+ L K+E+ P Sbjct: 98 VSSDSDFTRLASRIRESGLTVFGFGEKKTPQPFVS-----ACDKFIYFEILNKDEVVHSP 152 Query: 178 DEDKK 182 K Sbjct: 153 TATSK 157 >gi|110596945|ref|ZP_01385235.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031] gi|110341632|gb|EAT60092.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031] Length = 247 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 26/182 (14%), Positives = 54/182 (29%), Gaps = 29/182 (15%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 + E++A+ ID N + LL Y + + Sbjct: 4 EKTERLAVLIDADNTQPAI--------IEGLLAEVAKYGTANVKRIYGDWTTTALRGWK- 54 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 + + ++F G K++ D + +DA + + + I S Sbjct: 55 ---------EVLLEFSIQPIQQFGYTKG----KNATDSAMIIDAMDLLYTGKFQGFCIVS 101 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 D FT L + ++ V + S D F+ L+ ++ + Sbjct: 102 SDSDFTKLASRIRESGLTVYGFGEKKTPGPFVS-----ACDKFIYTEVLRLKLNENEPIA 156 Query: 181 KK 182 +K Sbjct: 157 RK 158 >gi|91786924|ref|YP_547876.1| hypothetical protein Bpro_1025 [Polaromonas sp. JS666] gi|91696149|gb|ABE42978.1| protein of unknown function DUF88 [Polaromonas sp. JS666] Length = 260 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 56/172 (32%), Gaps = 29/172 (16%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 D + ++AL ID N AS ID +L + Y + + Sbjct: 1 MDHKPRVALLIDADNSPAS------KIDL--ILNELSTFGETNIRRAYGNWKKSELKGW- 51 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIF 119 + + ++F + G K++ D+ + +DA E ++ + I Sbjct: 52 ---------EEALHEHAIRPMQQFDYSKG----KNASDMAMVIDALELLYTDRPDAFGIV 98 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 S D FT LV L+ K V + F+ L L+ Sbjct: 99 SSDADFTPLVMHLRAKGAAVYGFGAQKTPEP-----FVNACSKFLFLDKLRP 145 >gi|262375022|ref|ZP_06068256.1| conserved hypothetical protein [Acinetobacter lwoffii SH145] gi|262310035|gb|EEY91164.1| conserved hypothetical protein [Acinetobacter lwoffii SH145] Length = 269 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 28/181 (15%), Positives = 57/181 (31%), Gaps = 29/181 (16%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +K A+ ID N ++ +L+ I Y + +++ Sbjct: 6 QTKKFAVLIDADNSSINA--------ISSVLEEVAKYGIASVKRVYGDWSSETLKKW--- 54 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSG 121 ++F G K + D+ L +DA + + L+ I S Sbjct: 55 -------RDVLLPHAITPVQQFAYTKG----KDATDMILIIDAMDLLYAGALDGFCIVSS 103 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 D FT L + ++ V + ++ D F+ + L + +ED Sbjct: 104 DSDFTPLASRIRENGLTVYGFG-----KKATPEAFKKACDKFIYIENLLVDSEIKNNEDG 158 Query: 182 K 182 + Sbjct: 159 E 159 >gi|238023177|ref|ZP_04603603.1| hypothetical protein GCWU000324_03103 [Kingella oralis ATCC 51147] gi|237865560|gb|EEP66700.1| hypothetical protein GCWU000324_03103 [Kingella oralis ATCC 51147] Length = 258 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 56/165 (33%), Gaps = 29/165 (17%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 + +A+FID N+ A ID+ ++ + V+ Y + + + Sbjct: 8 KTVAVFIDADNVPA------KKIDF--IISELANYGAVMVRKIYGNWKSERLKGW----- 54 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDG 123 ++F G K++ D+ L +D + S ++ I S D Sbjct: 55 -----EEVLLDYALAPVQQFDYAKG----KNATDMALTIDVMDMLYSGKIDVFCIVSSDS 105 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 FT L ++ + K+V S L + F+ L Sbjct: 106 DFTPLAMRVKTEGKQVIGFG-----RHSTSKALVAACNKFLFLDD 145 >gi|146308706|ref|YP_001189171.1| hypothetical protein Pmen_3691 [Pseudomonas mendocina ymp] gi|145576907|gb|ABP86439.1| hypothetical protein Pmen_3691 [Pseudomonas mendocina ymp] Length = 272 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 26/169 (15%), Positives = 48/169 (28%), Gaps = 29/169 (17%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 + +A+ ID N A+ L + + Y + Sbjct: 10 QHKHLAVLIDADNAPAAI--------VEGLFEEIAKYGVASVKRIYGDWTQPNLGSWKK- 60 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSG 121 + ++F G K++ D L +DA + + + + S Sbjct: 61 ---------VLLDHSIQPIQQFAYTKG----KNATDSSLIIDAMDLLYTRRFDGFCLVSS 107 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 D FT L A L+ + V + S D F+ L+ Sbjct: 108 DSDFTRLAARLREEGLTVYGFGEEKTPSPFVS-----ACDKFIYTEILR 151 >gi|323343191|ref|ZP_08083422.1| protein of hypothetical function DUF88 [Erysipelothrix rhusiopathiae ATCC 19414] gi|322463255|gb|EFY08450.1| protein of hypothetical function DUF88 [Erysipelothrix rhusiopathiae ATCC 19414] Length = 241 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 25/165 (15%), Positives = 48/165 (29%), Gaps = 29/165 (17%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 +IA+ ID N+ + + +L+ Y + Sbjct: 8 RIAVLIDAENVPYA--------NIGGVLREVARYGTPTVKRIYGDWTKQTASGWKSHL-- 57 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDGC 124 + ++++ G K+S D + +DA + +E I S D Sbjct: 58 --------LEHAITPIQQYSYTTG----KNSSDSAMIIDAMDILYEGNVESFCIVSSDSD 105 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 FT L L+ K V + D F+ + + Sbjct: 106 FTRLAVRLREAGKYVIGIGEQK-----TPSAFIASCDKFIYIEII 145 >gi|91772560|ref|YP_565252.1| hypothetical protein Mbur_0520 [Methanococcoides burtonii DSM 6242] gi|91711575|gb|ABE51502.1| Hypothetical protein Mbur_0520 [Methanococcoides burtonii DSM 6242] Length = 262 Score = 108 bits (270), Expect = 3e-22, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 54/171 (31%), Gaps = 29/171 (16%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 + +K+A+ ID N+++S + L I Y G + Sbjct: 5 ESHDKLAVLIDADNVHSSI--------IKGLFDEIAKYGIASVKRLYGDWTGPQLSNWK- 55 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 N + ++F+ K++ D L +DA + + L+ I S Sbjct: 56 ---------DNLHIYSIQPIQQFSY----TAKKNATDSALIIDAMDLLYTRNLDGFCIVS 102 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 D +T L ++ V + R + F+ + L+ Sbjct: 103 SDSDYTKLCQRIRESGAFVYGFGEKK-----TPEAFRAACNKFIYVENLRK 148 >gi|332139693|ref|YP_004425431.1| hypothetical protein MADE_1001420 [Alteromonas macleodii str. 'Deep ecotype'] gi|327549715|gb|AEA96433.1| hypothetical protein MADE_1001420 [Alteromonas macleodii str. 'Deep ecotype'] Length = 249 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 32/170 (18%), Positives = 56/170 (32%), Gaps = 29/170 (17%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 D +K+A+ ID N S +L + V+ Y D + + Sbjct: 4 LDVHKKVAVLIDADNAQLS--------KLSAILDEISAHGHVLIKRAYGDWSIDALKNWK 55 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIF 119 ++ + ++F G K++ D + +DA + SE ++ + Sbjct: 56 TPLN----------ELAIQPIQQFAYTTG----KNATDASMIIDAMDLLYSEKIDAFALV 101 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 S D FT L + L+ K V V R D F+ L Sbjct: 102 SSDSDFTKLASRLRESEKFVFGVGEKK-----TPVSFRNACDDFIFTENL 146 >gi|332829851|gb|EGK02493.1| hypothetical protein HMPREF9455_01450 [Dysgonomonas gadei ATCC BAA-286] Length = 251 Score = 108 bits (270), Expect = 4e-22, Method: Composition-based stats. Identities = 26/172 (15%), Positives = 53/172 (30%), Gaps = 30/172 (17%) Query: 1 MFDPRE-KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 M + K+A+ ID N+ S + + +L I Y Sbjct: 1 MVPKSDMKLAVLIDADNIPYS--------NIKGMLDEITKFGIPTIKRIYGDWTKPSVSG 52 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLV 117 + + ++++ G K++ D + +DA + S+ ++ Sbjct: 53 WKQPL----------LEHAITPIQQYSYTTG----KNATDSAMIIDAMDILHSDKVDGFC 98 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 + S D FT L L+ V + + D F+ + L Sbjct: 99 LVSSDSDFTRLAVRLRESGMFVLGLGEKKTPNP-----FIVACDKFIYIEIL 145 >gi|221195605|ref|ZP_03568659.1| conserved hypothetical protein [Atopobium rimae ATCC 49626] gi|221184371|gb|EEE16764.1| conserved hypothetical protein [Atopobium rimae ATCC 49626] Length = 256 Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 37/175 (21%), Positives = 64/175 (36%), Gaps = 24/175 (13%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + P+ IA+FID N S G + + + + + Y + Sbjct: 4 ITTPQSSIAVFIDYENFPVGSN--GSRGALKLVFERLVDKGRITIKRAYC--------DW 53 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLV 117 S + LH G +++ ++ K+S D+ LAVDA E + ++ Sbjct: 54 SRHEAVKPALHELGVELIEIP-------DNSQKGKNSADIHLAVDALEACLTKDHIDTFA 106 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 I SGD F+ LVA L+ K V + + L D F+ + + Sbjct: 107 ILSGDSDFSPLVAKLKEYDKTVIGIGRKKG----TASLLENVCDEFIFYEDIAKK 157 >gi|149376066|ref|ZP_01893832.1| hypothetical protein MDG893_03770 [Marinobacter algicola DG893] gi|149359703|gb|EDM48161.1| hypothetical protein MDG893_03770 [Marinobacter algicola DG893] Length = 248 Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 29/183 (15%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + +KIA+ ID N S +++ S V+ Y D + + Sbjct: 4 LEQHKKIAVLIDADNAQLS--------KLPLIIEELSSHGHVVVKRAYGDWSIDSLKNWK 55 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIF 119 + ++ + ++F G K++ D + +DA + S + + Sbjct: 56 TVLN----------ELAIQPIQQFAYTKG----KNATDASMIIDAMDLLYSSKFDAFALV 101 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 S D FT L + L+ V R D F+ L+ PDE Sbjct: 102 SSDSDFTKLASRLRESEIYVFGFGEKK-----TPVSFRSACDDFLFTENLEYPEEVAPDE 156 Query: 180 DKK 182 K Sbjct: 157 PAK 159 >gi|326802048|ref|YP_004319867.1| hypothetical protein Sph21_4688 [Sphingobacterium sp. 21] gi|326552812|gb|ADZ81197.1| Domain of unknown function DUF88 [Sphingobacterium sp. 21] Length = 272 Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 49/164 (29%), Gaps = 29/164 (17%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 IA+ ID N+ ++ +L + Y + Sbjct: 12 IAVLIDADNVSST--------KIEGILDEVKRHGTPSIKRIYGDWTSTYVAGWK------ 57 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDGCF 125 ++++ G K++ D L +DA + ++ ++ I S D F Sbjct: 58 ----EPLLTHAITPIQQYSYTTG----KNATDSALIIDAMDILHTQKVDGFCIVSSDSDF 109 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 T L L+ K V + + D F+ + L Sbjct: 110 TRLAIRLRESGKLVLGIGQKKTPKP-----FIAACDKFIYIEIL 148 >gi|297622586|ref|YP_003704020.1| hypothetical protein Trad_0338 [Truepera radiovictrix DSM 17093] gi|297163766|gb|ADI13477.1| protein of unknown function DUF88 [Truepera radiovictrix DSM 17093] Length = 198 Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 40/172 (23%), Positives = 77/172 (44%), Gaps = 10/172 (5%) Query: 4 PREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 P +++ LF+D NLY +++ +DY +LK ++ A Y + Sbjct: 34 PEQRVGLFVDTQNLYYAARDIYSRHVDYAVMLKLSERSRHLVHATAYVVEREGEATAY-- 91 Query: 63 LHPLLDWLHYNGFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 + L G++V + + ++ GR ++ D+ +A D + L+ +V+ SG Sbjct: 92 --GFVTKLSALGYRVRRRKVRVHRADSGGRPVLEGDWDMGIAADIVRAWDYLDVIVLASG 149 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 DG F ++ Q++ K+V +++ AS L AD FM LA + + Sbjct: 150 DGDFAPMLELAQQRGKRVEVLAF----REAASQNLLDLADAFMGLADVPDIF 197 >gi|288573726|ref|ZP_06392083.1| protein of unknown function DUF88 [Dethiosulfovibrio peptidovorans DSM 11002] gi|288569467|gb|EFC91024.1| protein of unknown function DUF88 [Dethiosulfovibrio peptidovorans DSM 11002] Length = 274 Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 26/180 (14%), Positives = 50/180 (27%), Gaps = 29/180 (16%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 + ++A+ ID N S LL + Y + Sbjct: 8 QPRLAVLIDADNARPSIT--------EPLLAEVAKYGVASVKRIYGDWTTPNLGGWKT-- 57 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122 + + ++F G K++ D + +DA + + + + S D Sbjct: 58 --------VLLEHSIQPIQQFRYTVG----KNATDSAMIIDAMDLLFTNRFDGFCLVSSD 105 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182 FT L A ++ V + S D F+ + P K+ Sbjct: 106 SDFTRLAARIREAGLMVYGFGEKKTPKPFVS-----ACDKFIYTEVISVNKEDSPSAIKR 160 >gi|325928676|ref|ZP_08189851.1| hypothetical protein XPE_3939 [Xanthomonas perforans 91-118] gi|325540954|gb|EGD12521.1| hypothetical protein XPE_3939 [Xanthomonas perforans 91-118] Length = 280 Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 50/169 (29%), Gaps = 29/169 (17%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 +P ++IAL ID N A +L + Y + + Sbjct: 6 NPDKRIALLIDADNAPAG--------KIDVVLAEVARYGVANVRRAYGNWKSPHLKGW-- 55 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 + ++F + G K++ D+ + +DA + + L+ I S Sbjct: 56 --------EAALHDYAIRPIQQFAYSSG----KNASDMAMVIDAMDLLYARNLDGFAIVS 103 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 D FT LV L KV + F + L Sbjct: 104 SDADFTPLVMRLLTDGMKVYGFGEKKTPAP-----FVNACSKFTYVEAL 147 >gi|257455528|ref|ZP_05620760.1| conserved hypothetical protein [Enhydrobacter aerosaccus SK60] gi|257447097|gb|EEV22108.1| conserved hypothetical protein [Enhydrobacter aerosaccus SK60] Length = 350 Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 56/171 (32%), Gaps = 28/171 (16%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 D K+A+ ID N +S+K +L+ + Y + + + Sbjct: 8 DNSAKLAVLIDADN--SSAKK------IPLILQEVAKYGVASVKRVYGDWSSENLKNW-- 57 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 ++F G K + D+ L ++A + S+ L+ I S Sbjct: 58 --------RDVLLPHAITPVQQFAYTSG----KDATDMMLIINAMDLLYSKALDGFCIVS 105 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 D FT L + ++ V S + D F+ + L++ Sbjct: 106 SDSDFTPLASRIRESGLVVYGFGE----KSKTPEAFINACDKFIYIENLED 152 >gi|221065080|ref|ZP_03541185.1| protein of unknown function DUF88 [Comamonas testosteroni KF-1] gi|220710103|gb|EED65471.1| protein of unknown function DUF88 [Comamonas testosteroni KF-1] Length = 300 Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 34/174 (19%), Positives = 56/174 (32%), Gaps = 30/174 (17%) Query: 1 MFDP-REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 M + + +IAL ID N A ID ++L + ++ Y Sbjct: 1 MPNDVQPRIALLIDADN------APAEMID--EILTELSTFGLINIRRAYGNWTKAGLHG 52 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLV 117 + + + ++F + G K++ D+ + VDA E +E + Sbjct: 53 WQSKL----------LEYAVRPMQQFDYSKG----KNATDMAMTVDAMELLYTEKPDAFG 98 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 I S D FT LV L+ K V F+ LK Sbjct: 99 IVSSDADFTPLVMHLRAKGAAVYGFG-----AEQTPKAFVNACSRFLYFDALKE 147 >gi|84625703|ref|YP_453075.1| hypothetical protein XOO_4046 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84369643|dbj|BAE70801.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 276 Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 51/169 (30%), Gaps = 29/169 (17%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 +P ++IAL ID N A +L + Y +++ Sbjct: 6 NPDKRIALLIDADNAPAG--------KIDVVLAEVARYGVANVRRAYGNWKSPHLKRW-- 55 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 + ++F + G K++ D+ + +DA + + L+ I S Sbjct: 56 --------EAALHDYAIRPIQQFAYSSG----KNASDMAMVIDAMDLLYARNLDGFAIVS 103 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 D FT LV L KV + F + L Sbjct: 104 SDADFTPLVMRLLTDGMKVYGFGEKKTPAP-----FVNACSKFTYVEAL 147 >gi|294056251|ref|YP_003549909.1| protein of unknown function DUF88 [Coraliomargarita akajimensis DSM 45221] gi|293615584|gb|ADE55739.1| protein of unknown function DUF88 [Coraliomargarita akajimensis DSM 45221] Length = 253 Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 30/183 (16%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M E IAL ID N A+ ID+ ++ S V Y + Sbjct: 1 MPQTNESIALLIDADNAPAA------KIDF--IISELASYGTVNIRRAYGNWKKAGLSGW 52 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVI 118 + + + F G K++ D+ L +DA + ++ ++ + Sbjct: 53 ----------EKVLHEHSIQPVQLFDLTKG----KNATDMALLIDAMDILYTKEVQTFCL 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 + D FT L L+ K+V + + +F L + P+ Sbjct: 99 VTSDCDFTPLCQRLRADGKRVLGFGSKTAPAP-----FVNSCSHFHYLDG-GPSKKQTPN 152 Query: 179 EDK 181 E K Sbjct: 153 ELK 155 >gi|269954862|ref|YP_003324651.1| hypothetical protein Xcel_0052 [Xylanimonas cellulosilytica DSM 15894] gi|269303543|gb|ACZ29093.1| protein of unknown function DUF88 [Xylanimonas cellulosilytica DSM 15894] Length = 470 Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats. Identities = 37/175 (21%), Positives = 66/175 (37%), Gaps = 23/175 (13%) Query: 2 FDPREKIALFIDGANLYASSKAL--GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 D E++A+F+D NL ++ G D+ + A R V+ Y Sbjct: 1 MDNEERLAVFLDYENLALGAREHLGGMQFDFGPIADALAVRGRVVVRRAYA--------D 52 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHL 116 +S L + +++ + K++ D+++ VDA E + E + Sbjct: 53 WSYFDEDRRALTRHQVELIEMPQRM------GASRKNAADIKMVVDAIEMAFEREYISTF 106 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 V+ +GD F+ LV L+ K+V V S L D F+ L+ Sbjct: 107 VMCTGDSDFSPLVHKLRELNKRVIGV----GVEKSTSRLLPASCDEFLFYDRLEG 157 >gi|188574761|ref|YP_001911690.1| hypothetical protein PXO_03707 [Xanthomonas oryzae pv. oryzae PXO99A] gi|188519213|gb|ACD57158.1| protein of unknown function [Xanthomonas oryzae pv. oryzae PXO99A] Length = 276 Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 51/169 (30%), Gaps = 29/169 (17%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 +P ++IAL ID N A +L + Y +++ Sbjct: 6 NPDKRIALLIDADNAPAG--------KIDVVLAEVARYGVANVRRAYGNWKSPHLKRW-- 55 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 + ++F + G K++ D+ + +DA + + L+ I S Sbjct: 56 --------EAALHDYAIRPIQQFAYSSG----KNASDMAMVIDAMDLLYARNLDGFAIVS 103 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 D FT LV L KV + F + L Sbjct: 104 SDADFTPLVMRLLTDGMKVYGFGEKKTPAP-----FVNACSKFTYVEAL 147 >gi|78049501|ref|YP_365676.1| hypothetical protein XCV3945 [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78037931|emb|CAJ25676.1| conserved hypothetical protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 273 Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 50/169 (29%), Gaps = 29/169 (17%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 +P ++IAL ID N A +L + Y + + Sbjct: 4 NPDKRIALLIDADNAPAG--------KIDVVLAEVARYGVANVRRAYGNWKSPHLKGW-- 53 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 + ++F + G K++ D+ + +DA + + L+ I S Sbjct: 54 --------EAALHDYAIRPIQQFAYSSG----KNASDMAMVIDAMDLLYARNLDGFAIVS 101 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 D FT LV L KV + F + L Sbjct: 102 SDADFTPLVMRLLTDGMKVYGFGEKKTPAP-----FVNACSKFTYVEAL 145 >gi|193212130|ref|YP_001998083.1| hypothetical protein Cpar_0461 [Chlorobaculum parvum NCIB 8327] gi|193085607|gb|ACF10883.1| protein of unknown function DUF88 [Chlorobaculum parvum NCIB 8327] Length = 450 Score = 107 bits (268), Expect = 5e-22, Method: Composition-based stats. Identities = 30/184 (16%), Positives = 57/184 (30%), Gaps = 29/184 (15%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M RE IA+ ID N + ID+ +L +V Y + + Sbjct: 1 MEHSRETIAMLIDADN------SPSDKIDF--ILSEMAKYGVVNIRRAYGNWKSHSLKGW 52 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118 + ++F G K++ D+ + +DA + S+ L+ I Sbjct: 53 ----------EDKLHDYAIRPIQQFDYTKG----KNATDMAMTIDAMDLLYSKKLDAFCI 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 S D FT LV + + V + F+ + + + Sbjct: 99 VSSDSDFTPLVMRILSEGLNVYGFGQKSAPAP-----FVNACSTFLYVESFCGGQEKTKN 153 Query: 179 EDKK 182 + + Sbjct: 154 DSGR 157 >gi|115526363|ref|YP_783274.1| hypothetical protein RPE_4370 [Rhodopseudomonas palustris BisA53] gi|115520310|gb|ABJ08294.1| protein of unknown function DUF88 [Rhodopseudomonas palustris BisA53] Length = 253 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 28/177 (15%), Positives = 56/177 (31%), Gaps = 31/177 (17%) Query: 1 MFDPR--EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58 M + + A+ ID N S++ G L + Y + Sbjct: 1 MPHQKRLPRFAVLIDADN--TSAQIAG------GLFEEVAKFGEASVRRIYGDFSTPQLK 52 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHL 116 ++ + + +++ G K++ D+ L +DA + S + Sbjct: 53 SWAEILQ----------KHAIDPYQQYAYTKG----KNASDIALVIDAMDLLHSGRFDGF 98 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 + S D FT L + L+ + V T + R+ F+ L E+ Sbjct: 99 CLVSSDSDFTRLASRLREQGADVYGFGT-----QCTPESFRQACRRFIYTENLLPEV 150 >gi|320352193|ref|YP_004193532.1| hypothetical protein Despr_0047 [Desulfobulbus propionicus DSM 2032] gi|320120695|gb|ADW16241.1| hypothetical protein Despr_0047 [Desulfobulbus propionicus DSM 2032] Length = 258 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 40/165 (24%), Positives = 78/165 (47%), Gaps = 13/165 (7%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIV-IRAYYYTTVVGDPEQQ---- 59 K A+++D N+ S G+ + Y L+ + V +RA Y + Q+ Sbjct: 1 MLKTAIYVDAENIKMSG---GYGMRYDVLVDLANNTNSVMLRANCYLAEDHERTQRDAEY 57 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119 ++ + L GF+++ K + F + G K++ D++LA+DA Q+ L+ +++ Sbjct: 58 RQKVYSYHNILRQCGFKIIKKYVRRFKDEDGNITTKANADMDLAIDALLQARNLDRIILL 117 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 +GDG F L+ ALQ +V ++ + +LR AD ++ Sbjct: 118 TGDGDFLRLIIALQNMGCRVEVIGF-----HNVNKELREVADSYI 157 >gi|330504910|ref|YP_004381779.1| hypothetical protein MDS_3996 [Pseudomonas mendocina NK-01] gi|328919196|gb|AEB60027.1| hypothetical protein MDS_3996 [Pseudomonas mendocina NK-01] Length = 274 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 25/174 (14%), Positives = 51/174 (29%), Gaps = 29/174 (16%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 + A+ ID N A+ L + + Y + Sbjct: 10 QHKHFAVLIDADNAPAAI--------VEGLFEEIAKYGVASVKRIYGDWTQPNLGSWKK- 60 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSG 121 + ++F G K++ D L +DA + + + + S Sbjct: 61 ---------VLLDHSIQPIQQFAYTKG----KNATDSSLIIDAMDLLYTRRFDGFCLVSS 107 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 D FT L A L+ + +V + + D F+ L+++ + Sbjct: 108 DSDFTRLAARLREEGLEVIGFGEQKTPQP-----FVKACDTFIYTELLRDDASE 156 >gi|256396571|ref|YP_003118135.1| hypothetical protein Caci_7469 [Catenulispora acidiphila DSM 44928] gi|256362797|gb|ACU76294.1| protein of unknown function DUF88 [Catenulispora acidiphila DSM 44928] Length = 260 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 48/166 (28%), Gaps = 29/166 (17%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 K+A+ ID N S + LL Y G + + Sbjct: 8 KLAVLIDADNAQPS--------NAATLLAEIAKYGTAHVKRAYGDWTGTSLKGWKEHL-- 57 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124 + + ++F G K++ D + +DA + S E I S D Sbjct: 58 --------LALSIQPIQQFAYTSG----KNATDAAMVIDAMDLLYSGRFEGFCIVSSDSD 105 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 FT L A ++ V + + D F+ L Sbjct: 106 FTRLAARIRESGLIVYGFGERKTPKPFVA-----ACDKFVYTENLA 146 >gi|189500992|ref|YP_001960462.1| hypothetical protein Cphamn1_2071 [Chlorobium phaeobacteroides BS1] gi|189496433|gb|ACE04981.1| conserved hypothetical protein [Chlorobium phaeobacteroides BS1] Length = 247 Score = 107 bits (268), Expect = 6e-22, Method: Composition-based stats. Identities = 27/172 (15%), Positives = 51/172 (29%), Gaps = 29/172 (16%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 + E++ + ID N AS LL I Y + + Sbjct: 4 EKTERLTVLIDADNTQASI--------IDGLLAEVAKYGIASVKRIYGDWTSQALKGWK- 54 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 +V+ + + + + G R K++ D + +DA + + + I S Sbjct: 55 -------------EVLLEHSIQPIQQFGYTRGKNATDSAMIIDAMDLLYTGNFDGFCIVS 101 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 D FT L + ++ V D F+ L+ Sbjct: 102 SDSDFTKLASRIRESGLFVYGFGEKK-----TPSAFVSACDKFIYTEVLRAR 148 >gi|325924315|ref|ZP_08185859.1| hypothetical protein XGA_4921 [Xanthomonas gardneri ATCC 19865] gi|325545180|gb|EGD16490.1| hypothetical protein XGA_4921 [Xanthomonas gardneri ATCC 19865] Length = 276 Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats. Identities = 29/172 (16%), Positives = 51/172 (29%), Gaps = 29/172 (16%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 +P ++IAL ID N A +L + Y + + Sbjct: 6 NPDKRIALLIDADNAPAG--------KIDVVLAEVARYGVANVRRAYGNWKSPHLKNW-- 55 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 + ++F + G K++ D+ + +DA + + L+ I S Sbjct: 56 --------EAALHDYAIRPIQQFAYSSG----KNASDMAMVIDAMDLLYARNLDGFAIVS 103 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 D FT LV L KV + F + L + Sbjct: 104 SDADFTPLVMRLLTDGMKVYGFGEKKTPAP-----FVNACSKFTYVEALGEQ 150 >gi|149917268|ref|ZP_01905767.1| hypothetical protein PPSIR1_40335 [Plesiocystis pacifica SIR-1] gi|149821875|gb|EDM81269.1| hypothetical protein PPSIR1_40335 [Plesiocystis pacifica SIR-1] Length = 474 Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats. Identities = 42/174 (24%), Positives = 65/174 (37%), Gaps = 24/174 (13%) Query: 5 REKIALFIDGANLYASS-------KALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 ++IA+FID NL +D +L++ R +I A Y Sbjct: 4 NDRIAMFIDFENLVYGLENTEQHEGRADIALDVERLVRFARDEGRLIVARAYADWRSASV 63 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEH 115 +Q + G + + + + VK+S+DV LAVDA E + Sbjct: 64 RQHQRDLYVQ------GIEPINVLGRRHG-----SEVKNSVDVALAVDAVESLFERDYDT 112 Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 V+ SGD F L+ ++ K+V VS AS L D F+ L Sbjct: 113 FVLISGDRDFLPLLRCIRSHGKRVVGVS----VRESASRDLPNLCDRFVFYRDL 162 >gi|108802863|ref|YP_642800.1| hypothetical protein Rxyl_0007 [Rubrobacter xylanophilus DSM 9941] gi|108764106|gb|ABG02988.1| protein of unknown function DUF88 [Rubrobacter xylanophilus DSM 9941] Length = 487 Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats. Identities = 42/166 (25%), Positives = 68/166 (40%), Gaps = 14/166 (8%) Query: 8 IALFIDGANLYASS-KALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 +A+FID N+Y S+ G + +L+ R ++ A Y + P Sbjct: 104 LAIFIDWENIYISTVSEYGAKPNVSAILEKAREYGRIVSATAYADWTDGEFRDAPPTLY- 162 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG---LEHLVIFSGDG 123 NG A+ F +KR +S+DV LAV+ + ++ V+ +GDG Sbjct: 163 -----SNGISPRYISARYFPGGKSQKRRTNSIDVMLAVECVDFLHNHPQVDTYVLVTGDG 217 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 F LV L+ + K V ++ S L AD+F+ A L Sbjct: 218 DFIPLVNLLRSRGKVVVVI----GVSEATSYHLIESADHFISYASL 259 >gi|194291074|ref|YP_002006981.1| hypothetical protein RALTA_A2999 [Cupriavidus taiwanensis LMG 19424] gi|193224909|emb|CAQ70920.1| conserved hypothetical protein [Cupriavidus taiwanensis LMG 19424] Length = 426 Score = 107 bits (267), Expect = 8e-22, Method: Composition-based stats. Identities = 24/168 (14%), Positives = 47/168 (27%), Gaps = 29/168 (17%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +A+ ID N + LL + Y + Sbjct: 12 LAVLIDADNAAPAI--------VEGLLAEVAKYGVAAVKRIYGDWTRPNLAGWK------ 57 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCF 125 + ++F G K++ D + +DA + + + I S D F Sbjct: 58 ----ERLLSHSIQPIQQFRYTVG----KNATDSAMIIDAMDLLYTGRFDGFCIVSSDSDF 109 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 T L + ++ + V + D F+ L+ E+ Sbjct: 110 TRLASRIREQGLTVYGFGERKTPKP-----FVTACDKFIYSDVLRAEV 152 >gi|73542916|ref|YP_297436.1| hypothetical protein Reut_A3232 [Ralstonia eutropha JMP134] gi|72120329|gb|AAZ62592.1| conserved hypothetical protein [Ralstonia eutropha JMP134] Length = 419 Score = 107 bits (266), Expect = 8e-22, Method: Composition-based stats. Identities = 24/176 (13%), Positives = 48/176 (27%), Gaps = 29/176 (16%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +A+ ID N + LL + Y + Sbjct: 12 LAVLIDADNAAPAI--------IEGLLAEVAKYGVAAVKRIYGDWTKPNLSGWK------ 57 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCF 125 + ++F G K++ D + +DA + +E + + S D F Sbjct: 58 ----ECLLSHSIQPIQQFRYTVG----KNATDSAMIIDAMDLLYTERFDGFCLVSSDSDF 109 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 T L + ++ + V + D F+ L+ + D Sbjct: 110 TRLASRIREQGLIVYGFGERKTPKP-----FVTACDKFIYSDVLRADAEVDEAATP 160 >gi|254424011|ref|ZP_05037729.1| conserved hypothetical protein [Synechococcus sp. PCC 7335] gi|196191500|gb|EDX86464.1| conserved hypothetical protein [Synechococcus sp. PCC 7335] Length = 157 Score = 107 bits (266), Expect = 9e-22, Method: Composition-based stats. Identities = 42/163 (25%), Positives = 80/163 (49%), Gaps = 13/163 (7%) Query: 17 LYASSKALGFDIDYRKLLKAFRSRAI---VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYN 73 ++ + + G+ D +++L+ F + A++YT + D L Sbjct: 1 MFYAQQKNGWFFDPKRVLEYFLKEIEGNVLGNAFWYTGLKDP-----QDQRAFRDALISL 55 Query: 74 GFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAAL 132 G+ V K+ KE+ ++ GR K+++D+E+ VD F + + +V+FSGDG F + L Sbjct: 56 GYTVRTKILKEYYDDASGRYSQKANLDIEIVVDMFNTVDQYDRVVLFSGDGDFERAIELL 115 Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 + K +T+VST M + +LR D ++DL ++ I + Sbjct: 116 RSKSTHITVVST----EGMIARELRNVTDRYIDLNSIRRRIEK 154 >gi|23009928|ref|ZP_00050797.1| COG1432: Uncharacterized conserved protein [Magnetospirillum magnetotacticum MS-1] Length = 110 Score = 107 bits (266), Expect = 9e-22, Method: Composition-based stats. Identities = 48/95 (50%), Positives = 74/95 (77%) Query: 78 VAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVK 137 + K KEFT++ GR+++K +MD+ELA+DA E + ++H+V+FSGDG F +LV A+QR+ Sbjct: 1 MTKPVKEFTDSAGRRKIKGNMDIELAIDALELAPYIDHMVLFSGDGDFRSLVEAIQRRGV 60 Query: 138 KVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 +V++VST+ + P+M +D LRRQAD F+DLA+L N Sbjct: 61 RVSVVSTIQTQPAMIADDLRRQADEFVDLAHLANR 95 >gi|254432426|ref|ZP_05046129.1| protein containing DUF88 [Cyanobium sp. PCC 7001] gi|197626879|gb|EDY39438.1| protein containing DUF88 [Cyanobium sp. PCC 7001] Length = 244 Score = 107 bits (266), Expect = 9e-22, Method: Composition-based stats. Identities = 27/172 (15%), Positives = 48/172 (27%), Gaps = 29/172 (16%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M +A+ ID N A+ +LL Y + Sbjct: 1 MSREAPNLAVLIDSDNAQATV--------ISELLAEVSQVGTATVKRAYGDWTTPQLSSW 52 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVI 118 + + + ++F+ G K++ D L +DA + +E + Sbjct: 53 KEVLNVHA----------IQPVQQFSYTSG----KNATDSALIIDAMDLLHGGRVEGFCL 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 S D FT L ++ + V D F+ LK Sbjct: 99 VSSDSDFTRLATRIREEGLLVIGFGERK-----TPKAFVAACDRFLYTDILK 145 >gi|153815213|ref|ZP_01967881.1| hypothetical protein RUMTOR_01447 [Ruminococcus torques ATCC 27756] gi|317502327|ref|ZP_07960496.1| hypothetical protein HMPREF1026_02440 [Lachnospiraceae bacterium 8_1_57FAA] gi|331089931|ref|ZP_08338823.1| hypothetical protein HMPREF1025_02406 [Lachnospiraceae bacterium 3_1_46FAA] gi|145847472|gb|EDK24390.1| hypothetical protein RUMTOR_01447 [Ruminococcus torques ATCC 27756] gi|316896283|gb|EFV18385.1| hypothetical protein HMPREF1026_02440 [Lachnospiraceae bacterium 8_1_57FAA] gi|330403163|gb|EGG82724.1| hypothetical protein HMPREF1025_02406 [Lachnospiraceae bacterium 3_1_46FAA] Length = 323 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 32/170 (18%), Positives = 57/170 (33%), Gaps = 29/170 (17%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 E+ AL ID N+ S+K + +L V Y + Sbjct: 2 EERFALLIDADNV--SAKY------IKPILDELSKYGNVTYKRIYGDWTRPNSAGWK--- 50 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122 Q ++F+ G K++ D + +DA + + LE + S D Sbjct: 51 -------EELLQNSITPIQQFSYTYG----KNATDSAMIIDAMDMLYASELEGFCLVSSD 99 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 FT L + L+ K+V + + R+ + F +L L + Sbjct: 100 SDFTRLASRLRESGKRVIGMGEAKTPLP-----FRKACEIFTELELLLED 144 >gi|313680485|ref|YP_004058224.1| hypothetical protein Ocepr_1598 [Oceanithermus profundus DSM 14977] gi|313153200|gb|ADR37051.1| protein of unknown function DUF88 [Oceanithermus profundus DSM 14977] Length = 189 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 38/172 (22%), Positives = 80/172 (46%), Gaps = 16/172 (9%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +++ALFIDG+ +Y +K +G+++D+RK+++ F S + A+YY + +++ Sbjct: 1 MDRLALFIDGSFVYNCAKRMGWNVDHRKVIEHFPSGFALFNAFYYAPITDWNDERQQK-- 58 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 LD L + G+ V ++ + S + +A D + + ++ SG Sbjct: 59 -FLDALIFMGYSVRSREVR---------GEAPSFEAHIATDLLITAPRWDVALLASGAAQ 108 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 V A++ K+V ++ P + +R D F+DL + + R+ Sbjct: 109 LVPAVEAVRTMGKEVHLLGI----PELVDLDIRSATDRFIDLKEYRELLERE 156 >gi|313159666|gb|EFR59024.1| conserved hypothetical protein [Alistipes sp. HGB5] Length = 320 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 23/171 (13%), Positives = 48/171 (28%), Gaps = 29/171 (16%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M +K A+ ID N+ + +L + Y Sbjct: 1 MELSDKKFAVLIDADNISHR--------KIKDILDEIANYGTPTIKRIYGDFTDPK---- 48 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVI 118 + +++ G K++ D L +DA + + I Sbjct: 49 ------FAAWKSILLENSITPIQQYAYTTG----KNATDSALIIDAMDILHKESVNGFCI 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 S D +T L + ++ ++V + + D F+ + L Sbjct: 99 VSSDSDYTRLASRIRESGREVLGFGEKKTPKP-----FIKSCDKFIYVEIL 144 >gi|320160886|ref|YP_004174110.1| hypothetical protein ANT_14820 [Anaerolinea thermophila UNI-1] gi|319994739|dbj|BAJ63510.1| hypothetical protein ANT_14820 [Anaerolinea thermophila UNI-1] Length = 302 Score = 106 bits (265), Expect = 1e-21, Method: Composition-based stats. Identities = 49/161 (30%), Positives = 80/161 (49%), Gaps = 13/161 (8%) Query: 9 ALFIDGANLYASSKALGFDIDYRKLLKAF-RSRAIVIRAYYYTTV----VGDPEQQFSPL 63 +F+D AN+Y + G + Y L + R A IR Y T D E+ Sbjct: 34 GVFVDVANIYLNG---GQRMQYDVLREFACRDHAEAIRLNAYVTYDVERAEDDEEYRKGA 90 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L G++V+ K +T+ G + K++ D+++AVDA QS+ L+ ++I SGDG Sbjct: 91 QNFHGALRDLGYKVIVKDIHWYTDVNGIRVAKANADLDMAVDALTQSDYLDRVLIASGDG 150 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F +V ALQ K +V +V S++L+ +AD+F+ Sbjct: 151 DFVQVVRALQNKGCRVEVVGLD-----NVSNRLKAEADFFI 186 >gi|322696485|gb|EFY88277.1| hypothetical protein MAC_05750 [Metarhizium acridum CQMa 102] Length = 251 Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats. Identities = 29/174 (16%), Positives = 51/174 (29%), Gaps = 29/174 (16%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 K+A+ ID N + + LL Y G + + Sbjct: 8 KLAVLIDADNAQPNMAGV--------LLAEIAKYGTAFVKRAYGDWTGTNLKGWK----- 54 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124 + ++F G K+S D + +DA + S + + S D Sbjct: 55 -----EQLLENSILPIQQFAYTQG----KNSTDAAMVIDAMDLLYSNRFDGFCLVSSDSD 105 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 FT L + ++ V + L D F+ + L + PD Sbjct: 106 FTRLASRIRESGLLVYGFGERKAPK-----ALVSACDKFIYIENLSQNVDFAPD 154 >gi|21244544|ref|NP_644126.1| hypothetical protein XAC3820 [Xanthomonas axonopodis pv. citri str. 306] gi|21110218|gb|AAM38662.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] Length = 268 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 30/175 (17%), Positives = 51/175 (29%), Gaps = 30/175 (17%) Query: 1 MFDP-REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 M D ++IAL ID N A +L + Y + Sbjct: 3 MSDNADKRIALLIDADNAPAG--------KIDVVLAEVARYGVANVRRAYGNWKSPHLKG 54 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLV 117 + + ++F + G K++ D+ + +DA + + L+ Sbjct: 55 W----------EAALHDYAIRPIQQFAYSSG----KNASDMAMVIDAMDLLYARNLDGFA 100 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 I S D FT LV L KV + F + L + Sbjct: 101 IVSSDADFTPLVMRLLTDGMKVYGFGEKKTPAP-----FVNACSKFTYVEALGEQ 150 >gi|154506256|ref|ZP_02042994.1| hypothetical protein RUMGNA_03798 [Ruminococcus gnavus ATCC 29149] gi|153793444|gb|EDN75864.1| hypothetical protein RUMGNA_03798 [Ruminococcus gnavus ATCC 29149] Length = 320 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 58/179 (32%), Gaps = 31/179 (17%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 E+ AL ID N+ S+K + +L V Y + Sbjct: 2 EERYALLIDADNV--SAKY------IKPILDELSKYGNVTYKRIYGDWTSTYNSSWK--- 50 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122 Q ++F+ G K++ D + +DA + + LE + S D Sbjct: 51 -------EVLLQNSITPIQQFSYTHG----KNATDSAMIIDAMDMLYTSELEGFCLVSSD 99 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE--IARDPDE 179 FT L + L+ K V + + P R+ D F L L + + + Sbjct: 100 SDFTKLASRLRESGKMVIGMGEDKTPPP-----FRKACDIFTVLELLLEDSMLEKPEKA 153 >gi|315925521|ref|ZP_07921731.1| protein of hypothetical function DUF88 [Pseudoramibacter alactolyticus ATCC 23263] gi|315621062|gb|EFV01033.1| protein of hypothetical function DUF88 [Pseudoramibacter alactolyticus ATCC 23263] Length = 320 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 31/176 (17%), Positives = 56/176 (31%), Gaps = 29/176 (16%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 + A+ IDG N+ S++ +L S + Y ++ Sbjct: 5 RFAILIDGDNI--SARY------IAGILDEMTSYGVATYKRIYGDWTSTGANKWKEQLLS 56 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDGC 124 ++F G K++ D L +DA + ++ I S D Sbjct: 57 KS----------ITPIQQFANVSG----KNATDSALIIDAMDILYGGMVDGFCIVSSDSD 102 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 FT L + L+ V + D R F+ L + + +D D+D Sbjct: 103 FTRLASRLRESGMMVIGMGEDK-----TPDSFRNACTKFISLENILDSYEQDIDQD 153 >gi|294494973|ref|YP_003541466.1| hypothetical protein Mmah_0289 [Methanohalophilus mahii DSM 5219] gi|292665972|gb|ADE35821.1| protein of unknown function DUF88 [Methanohalophilus mahii DSM 5219] Length = 258 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 55/170 (32%), Gaps = 29/170 (17%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 ++K+A+ ID N S L I Y + + Sbjct: 7 QKKLAVLIDADNAQPSI--------VEGLFSEIAKYGIASVKRIYGDWTRPNLKNWKDSL 58 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122 + + ++F+ G K++ D L +DA + SE L+ I S D Sbjct: 59 ----------LEHSIQPMQQFSYTYG----KNATDSSLIIDAMDLLYSEPLDGFCIVSSD 104 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 FT L + ++ +KV + + D F+ L+ E Sbjct: 105 SDFTRLSSRIRESGRKVYGFGELKTPKP-----FIAACDKFIYTENLRKE 149 >gi|153954651|ref|YP_001395416.1| hypothetical protein CKL_2033 [Clostridium kluyveri DSM 555] gi|219855122|ref|YP_002472244.1| hypothetical protein CKR_1779 [Clostridium kluyveri NBRC 12016] gi|146347509|gb|EDK34045.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555] gi|219568846|dbj|BAH06830.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 250 Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats. Identities = 32/179 (17%), Positives = 55/179 (30%), Gaps = 29/179 (16%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 D +KIA+ ID N+ S K + + D + Y + Sbjct: 1 MDKDKKIAVLIDADNV--SEKYIKYIFD------EISNHGTPTYKRIYGDWTKPQLASWK 52 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIF 119 +++ G K+S D L +DA + S ++ I Sbjct: 53 ----------NVLLNYSISPIQQYGYTTG----KNSTDAALIIDAMDILYSNNVDGFCIV 98 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 S D FT L A L+ V + + S + F L L + ++ + Sbjct: 99 SSDSDFTKLAARLREAGMFVIGMGEKKTPTPFIS-----ACEKFKYLEVLASMASKPAE 152 >gi|52842281|ref|YP_096080.1| hypothetical protein lpg2067 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52629392|gb|AAU28133.1| hypothetical protein lpg2067 [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 260 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 28/167 (16%), Positives = 50/167 (29%), Gaps = 29/167 (17%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 K+A+ ID N + LL I Y Q+ + Sbjct: 12 KLAVLIDADN--------ARAVIIDGLLTEIAGYGDAIVRRIYGDFTLPSSAQWKKVLH- 62 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124 + K ++F G K++ D L +DA + + I S D Sbjct: 63 ---------KYAIKPVQQFAFTSG----KNATDSALIIDAMDLLYTHRFGGFCIVSSDSD 109 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 FT+L ++ + +V + R + F+ L+ Sbjct: 110 FTSLANRIREEGLQVFGFGEKK-----TPEAFRNACNKFIFTEVLRP 151 >gi|52220908|ref|YP_086777.1| hypothetical protein pAgK84_22 [Agrobacterium tumefaciens] gi|222112727|ref|YP_002559314.1| hypothetical protein Arad_15022 [Agrobacterium radiobacter K84] gi|41393790|gb|AAS02138.1| hypothetical protein [Agrobacterium tumefaciens] gi|221728504|gb|ACM31476.1| conserved hypothetical protein [Agrobacterium radiobacter K84] Length = 275 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 26/176 (14%), Positives = 47/176 (26%), Gaps = 29/176 (16%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +AL IDG N+ LL + I Y + Sbjct: 9 LALLIDGDNVSPKI--------VTGLLAEIANYGIASVKRIYGDWTKPNLNGWK------ 54 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCF 125 + + ++F G K++ D + +DA + + I S D F Sbjct: 55 ----ECLLEHSIQPVQQFAYTTG----KNATDGAMIIDAMDLLYTGRFSGFCIVSSDSDF 106 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 L A ++ + V + D F+ L + + Sbjct: 107 ARLAARIREQGVTVYGFGERKTPRP-----FITACDKFVYFDVLNASVEEPATAEP 157 >gi|255020942|ref|ZP_05292998.1| hypothetical protein ACA_1164 [Acidithiobacillus caldus ATCC 51756] gi|254969733|gb|EET27239.1| hypothetical protein ACA_1164 [Acidithiobacillus caldus ATCC 51756] Length = 336 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 39/166 (23%), Positives = 79/166 (47%), Gaps = 14/166 (8%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSR--AIVIRAYYYTTVVGDPEQQFS 61 R+ I +++D N+ + G+ + Y L + A ++R Y + + ++ Sbjct: 5 SRQGIGVYVDAENIRYNG---GYAMRYDVLRRFAGRGDDARLLRLNTYMAIDEERLRRDP 61 Query: 62 PLHP----LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLV 117 + G++++ K + FT+ G + K++ D++LAVD QSE L+ ++ Sbjct: 62 DYRDGIRGYQQAVRDLGWKIIEKPVRWFTDEEGNRLSKANADLDLAVDVMLQSERLDQVL 121 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163 + +GDG F +V ALQ + +V +++ S L+ +AD F Sbjct: 122 LVTGDGDFLQVVRALQNRGCRVEVLAF-----RNVSRDLQHEADAF 162 >gi|58583915|ref|YP_202931.1| hypothetical protein XOO4292 [Xanthomonas oryzae pv. oryzae KACC10331] gi|58428509|gb|AAW77546.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae KACC10331] Length = 274 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 50/169 (29%), Gaps = 29/169 (17%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 +P ++IAL ID N A +L + Y + + Sbjct: 4 NPDKRIALLIDADNAPAG--------KIDVVLAEVARYGVANVRRAYGNWKSPQLKGW-- 53 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 + ++F + G K++ D+ + +DA + + L+ I S Sbjct: 54 --------EAALHDDAIRPIQQFAYSSG----KNASDMAMVIDAMDLLYARNLDGFAIVS 101 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 D FT LV L KV + F + L Sbjct: 102 SDADFTPLVMRLLTDGMKVYGFGEKKTPAP-----FVNACSKFTYVEAL 145 >gi|78186223|ref|YP_374266.1| hypothetical protein Plut_0335 [Chlorobium luteolum DSM 273] gi|78166125|gb|ABB23223.1| conserved hypothetical protein [Chlorobium luteolum DSM 273] Length = 247 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 29/185 (15%), Positives = 54/185 (29%), Gaps = 31/185 (16%) Query: 1 MFDPR-EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 M + R +++A+ ID N S LL Y + Sbjct: 1 MAEDRSDRLAVLIDADNTQPSI--------IEGLLAEIAKFGTSNVKRIYGDWTSTALKG 52 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLV 117 + + + ++F G K+S D + +DA + + Sbjct: 53 WK----------EVLLEYSIQPIQQFGYTKG----KNSTDSAMIIDAMDLLYTGRFNGFC 98 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI-ARD 176 I S D FT L ++ V + S D F+ L+ + + Sbjct: 99 IVSSDSDFTKLAVRIREAGLTVYGFGEQKTPGPFVS-----ACDKFIYTEVLRAKTNENE 153 Query: 177 PDEDK 181 P + + Sbjct: 154 PIKRR 158 >gi|302890921|ref|XP_003044343.1| hypothetical protein NECHADRAFT_62469 [Nectria haematococca mpVI 77-13-4] gi|256725266|gb|EEU38630.1| hypothetical protein NECHADRAFT_62469 [Nectria haematococca mpVI 77-13-4] Length = 262 Score = 105 bits (263), Expect = 2e-21, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 53/165 (32%), Gaps = 29/165 (17%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 K+A+ ID N+ + + G ++L I Y G + Sbjct: 8 KLAVLIDSDNV--TPRVAG------QVLAEVAKYGIAFVKRAYGDWTGPGLNSWKDHLLD 59 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124 + ++F+ G K+S D + +DA + S + + S D Sbjct: 60 NS----------IQPIQQFSYTKG----KNSTDSAMIIDAMDLLYSNKFDGFCLVSSDSD 105 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 FT L + ++ V + L R D F+ + L Sbjct: 106 FTRLASRIRESGLVVYGFGERK-----TPNSLVRACDKFIYIENL 145 >gi|299532727|ref|ZP_07046115.1| hypothetical protein CTS44_18078 [Comamonas testosteroni S44] gi|298719362|gb|EFI60331.1| hypothetical protein CTS44_18078 [Comamonas testosteroni S44] Length = 293 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 32/174 (18%), Positives = 54/174 (31%), Gaps = 30/174 (17%) Query: 1 MFDP-REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 M + + +IAL ID N A ++L + ++ Y Sbjct: 1 MPNDVQPRIALLIDADNAPAEM--------IDEILTELSTFGLINIRRAYGNWTKAGLHG 52 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLV 117 + + + ++F + G K++ D+ + VDA E +E + Sbjct: 53 WQSKL----------LEYAVRPMQQFDYSKG----KNATDMAMTVDAMELLYTEKPDAFG 98 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 I S D FT LV L+ K V F+ LK Sbjct: 99 IVSSDADFTPLVMHLRAKGAAVYGFG-----AEQTPRAFVNACSRFLYFDALKE 147 >gi|88799413|ref|ZP_01114991.1| hypothetical protein MED297_17443 [Reinekea sp. MED297] gi|88777952|gb|EAR09149.1| hypothetical protein MED297_17443 [Reinekea sp. MED297] Length = 252 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 29/183 (15%), Positives = 55/183 (30%), Gaps = 30/183 (16%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M D +IAL ID N+ + +L V + + + + Sbjct: 1 MADKM-RIALLIDCDNVSHRA--------VEGVLAVLARYGQVNVRHAFGDWNSPHIKGW 51 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118 + + ++F R K++ D + +DA + S ++ + Sbjct: 52 AEKLQPNA----------IRPMQQFAY----TRQKNATDSAMIIDAMDLLYSGNVDAFAL 97 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 + D FT LV L+ V F+ + L D D Sbjct: 98 MTSDCDFTPLVMRLREAGLMVFGFGEEK-----TPAAFVDSCSQFVYIEKLTEASEVDDD 152 Query: 179 EDK 181 ++K Sbjct: 153 DEK 155 >gi|150389764|ref|YP_001319813.1| hypothetical protein Amet_1991 [Alkaliphilus metalliredigens QYMF] gi|149949626|gb|ABR48154.1| conserved hypothetical protein [Alkaliphilus metalliredigens QYMF] Length = 250 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 51/171 (29%), Gaps = 29/171 (16%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + +KIA+ ID N+ S K + F D + Y + Sbjct: 1 MENDKKIAVLIDADNV--SGKYIKFIFD------EISNHGTPTFKRIYGDWTNPQLSSWK 52 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIF 119 ++++ G K++ D L +DA + S ++ I Sbjct: 53 S----------VLLNYSITPIQQYSYTTG----KNATDAALIIDAMDILYSNNVDGFCIV 98 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 S D FT L A L+ V + + + F L L Sbjct: 99 SSDSDFTRLAARLREAGMYVIGMGEKKTPAP-----FIAACEKFKYLEVLA 144 >gi|305665003|ref|YP_003861290.1| hypothetical protein FB2170_01831 [Maribacter sp. HTCC2170] gi|88707415|gb|EAQ99660.1| hypothetical protein FB2170_01831 [Maribacter sp. HTCC2170] Length = 255 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 25/170 (14%), Positives = 54/170 (31%), Gaps = 29/170 (17%) Query: 9 ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68 A+ IDG N+ ++ + +++++ Y ++ Sbjct: 7 AVLIDGDNIPSA--------NVKEMMEEIAKYGNPTIKRIYGDWTNPRLNKWKA------ 52 Query: 69 WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDGCFT 126 + +++ G K++ D + +DA + S + + S D FT Sbjct: 53 ----VLLENAITPIQQYGYTSG----KNATDSAMIIDAMDILYSGKVNGFCLVSSDSDFT 104 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 L L+ +V + D D F+ + LKN+ Sbjct: 105 RLATRLREAGMQVFGIGEKK-----TPDPFIVACDKFIYIEILKNQSEET 149 >gi|294626535|ref|ZP_06705134.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|294665102|ref|ZP_06730406.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292599225|gb|EFF43363.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292605144|gb|EFF48491.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 270 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 50/169 (29%), Gaps = 29/169 (17%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 +P ++IAL ID N A +L + Y + + Sbjct: 6 NPDKRIALLIDADNAPAG--------KIDVVLAEVARYGVANVRRAYGNWKSPHLKGW-- 55 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 + ++F + G K++ D+ + +DA + + L+ I S Sbjct: 56 --------EAALHDYAIRPIQQFAYSSG----KNASDMAMVIDAMDLLYARNLDGFAIVS 103 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 D FT LV L KV + F + L Sbjct: 104 SDADFTPLVMRLLTDGMKVYGFGEKKTPAP-----FVNACSKFTYVEAL 147 >gi|325855713|ref|ZP_08171904.1| hypothetical protein HMPREF9303_0369 [Prevotella denticola CRIS 18C-A] gi|325483766|gb|EGC86728.1| hypothetical protein HMPREF9303_0369 [Prevotella denticola CRIS 18C-A] Length = 260 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 31/189 (16%), Positives = 61/189 (32%), Gaps = 34/189 (17%) Query: 1 MFDPRE-KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 M + E K+A+ ID N+ S +++L + + Y Sbjct: 1 MKEKEEMKLAVLIDADNVPCS--------KVKEMLNEITNYGVPTIKRIYGDWTKRTVSG 52 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLV 117 + + ++++ G K++ D + +DA + + Sbjct: 53 WKA----------VLLENAITPIQQYSYTTG----KNATDSAMIIDAMDILHGGDCDGFC 98 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL----KNEI 173 I S D FT L L+ K V + + D F+ + L NEI Sbjct: 99 IVSSDSDFTRLATRLRESGKYVIGIGEQKTPQP-----FIVSCDKFIYIEILETINANEI 153 Query: 174 ARDPDEDKK 182 ++ + K+ Sbjct: 154 KKEDNTAKR 162 >gi|327540413|gb|EGF26998.1| protein containing DUF88 [Rhodopirellula baltica WH47] Length = 242 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 55/182 (30%), Gaps = 31/182 (17%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 P IAL ID N +S ++ + +V Y + + Sbjct: 5 HPEGSIALLIDADNAPSS--------KIEFIISELATYGVVNIRKAYGNWTKRGLEGW-- 54 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFS 120 + + F G K++ D+ L +DA + + + + S Sbjct: 55 --------INVLHEYAIAPTQCFDLIKG----KNATDMALLIDAMDILYTRQVNTFGLVS 102 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 D FT LV L+ K+V S +F+ L + P + Sbjct: 103 SDCDFTPLVCRLREDGKQVIGFGRQNSPAP-----FVLACSHFIYLDE--EPTEKTPPKK 155 Query: 181 KK 182 ++ Sbjct: 156 RR 157 >gi|289450778|ref|YP_003475518.1| hypothetical protein HMPREF0868_1242 [Clostridiales genomosp. BVAB3 str. UPII9-5] gi|289185325|gb|ADC91750.1| conserved hypothetical protein [Clostridiales genomosp. BVAB3 str. UPII9-5] Length = 257 Score = 105 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 28/172 (16%), Positives = 52/172 (30%), Gaps = 30/172 (17%) Query: 1 MFDPRE-KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 M + + ++A+ ID N+ + + L++ I Y Sbjct: 1 MNNDDDIRLAVLIDADNISSHY--------VKALMEEVARYGIPTIKRIYGDWTRPNLSN 52 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLV 117 + ++F G K+S D L +DA + +E ++ Sbjct: 53 WK----------NCLLDHAIAPIQQFGYTSG----KNSTDSALIIDAMDILYAEKVDGFC 98 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 + S D FT L L+ K V + D F+ L + Sbjct: 99 LVSSDSDFTRLATRLREAGKVVYGFGEQKTPNP-----FIAACDRFVFLEII 145 >gi|255935257|ref|XP_002558655.1| Pc13g02120 [Penicillium chrysogenum Wisconsin 54-1255] gi|211583275|emb|CAP91281.1| Pc13g02120 [Penicillium chrysogenum Wisconsin 54-1255] Length = 259 Score = 105 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 47/166 (28%), Gaps = 29/166 (17%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 K+A+ ID N S L LL + Q + Sbjct: 7 PKLAVLIDADNARPSVVNL--------LLSEIAKYGTAHAKRAHGDWTRSSLQGWK---- 54 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDG 123 + + ++F G K++ D + +DA + S + + S D Sbjct: 55 ------DVLLEQSIQPIQQFAYTHG----KNATDSAMIIDAMDLLYSNRYDGFCLVSSDS 104 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 FT L A ++ V + + D F+ L Sbjct: 105 DFTRLAARIRESGLIVYGFGEQKTPKPFVA-----ACDKFIYTENL 145 >gi|313200777|ref|YP_004039435.1| hypothetical protein MPQ_1031 [Methylovorus sp. MP688] gi|312440093|gb|ADQ84199.1| conserved hypothetical protein [Methylovorus sp. MP688] Length = 280 Score = 105 bits (261), Expect = 4e-21, Method: Composition-based stats. Identities = 27/169 (15%), Positives = 51/169 (30%), Gaps = 29/169 (17%) Query: 4 PREKIALFIDGANLYASSKALGFDIDY-RKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 ++A+ ID N + ID +L + Y + ++ Sbjct: 11 NNPRLAVLIDADNTF-------KVIDIIDELFEEISKFGDASVRRIYGDWTQNQLNRWK- 62 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 + + +++ G K+S D L +DA + + L+ I S Sbjct: 63 ---------EILPKHAIQPIQQYANTKG----KNSTDSALIIDAMDLLYTAPLDGFCIVS 109 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 D FT L + K V + L + F+ + L Sbjct: 110 SDSDFTRLAIRFRESGKMVYGFGEQK-----TPESLMAACNQFIYIEIL 153 >gi|253998702|ref|YP_003050765.1| hypothetical protein Msip34_0991 [Methylovorus sp. SIP3-4] gi|253985381|gb|ACT50238.1| protein of unknown function DUF88 [Methylovorus sp. SIP3-4] Length = 275 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 27/169 (15%), Positives = 51/169 (30%), Gaps = 29/169 (17%) Query: 4 PREKIALFIDGANLYASSKALGFDIDY-RKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 ++A+ ID N + ID +L + Y + ++ Sbjct: 6 NNPRLAVLIDADNTF-------KVIDIIDELFEEISKFGDASVRRIYGDWTQNQLNRWK- 57 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 + + +++ G K+S D L +DA + + L+ I S Sbjct: 58 ---------EILPKHAIQPIQQYANTKG----KNSTDSALIIDAMDLLYTAPLDGFCIVS 104 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 D FT L + K V + L + F+ + L Sbjct: 105 SDSDFTRLAIRFRESGKMVYGFGEQK-----TPESLMAACNQFIYIEIL 148 >gi|302385690|ref|YP_003821512.1| hypothetical protein Closa_1286 [Clostridium saccharolyticum WM1] gi|302196318|gb|ADL03889.1| conserved hypothetical protein [Clostridium saccharolyticum WM1] Length = 308 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 57/171 (33%), Gaps = 29/171 (16%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +K A+ ID N+ S+K +L ++ Y ++ Sbjct: 3 SDKKFAVLIDSDNI--SAKY------ITCILDEMTRYGVITYKRIYGDWTSSQMGKWKM- 53 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSG 121 + ++F+ G K++ D L +DA + ++ ++ I S Sbjct: 54 ---------ELLENSITPIQQFSNTVG----KNATDSALIIDAMDLLYTDHVDGFCIVSS 100 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 D FT L + L+ K+V + R F +L L ++ Sbjct: 101 DSDFTRLASRLRESGKEVIGMGEDK-----TPKSFRAACTVFTNLEVLLDQ 146 >gi|94312326|ref|YP_585536.1| hypothetical protein Rmet_3395 [Cupriavidus metallidurans CH34] gi|93356178|gb|ABF10267.1| conserved hypothetical protein [Cupriavidus metallidurans CH34] Length = 432 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 23/167 (13%), Positives = 46/167 (27%), Gaps = 29/167 (17%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +A+ ID N + LL + Y + Sbjct: 11 LAVLIDADNAAPAI--------VEGLLAEVAKYGVAAVKRIYGDWTRPNLSGWK------ 56 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCF 125 + ++F G K++ D + +DA + + + I S D F Sbjct: 57 ----DRLLAHSIQPIQQFRYTVG----KNATDSAMIIDAMDLLYTGRFDGFCIVSSDSDF 108 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 T L + ++ + V + D F+ L+ + Sbjct: 109 TRLASRIREQGLTVYGFGERKTPKP-----FVTACDKFIYSDVLRAD 150 >gi|120436105|ref|YP_861791.1| hypothetical protein GFO_1754 [Gramella forsetii KT0803] gi|117578255|emb|CAL66724.1| protein containing DUF88 [Gramella forsetii KT0803] Length = 245 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 25/165 (15%), Positives = 54/165 (32%), Gaps = 29/165 (17%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +A+ IDG N+ ++ +++++ Y ++ Sbjct: 5 LAVLIDGDNIPSA--------HVKEMMEEIAKYGNPTIKRIYGDWTKPHLNKWK------ 50 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDGCF 125 + +++ G + K++ D + +DA + S ++ + S D F Sbjct: 51 ----NVLLENAIHPIQQY----GYTQGKNATDSAMIIDAMDILYSNKVDGFCLVSSDSDF 102 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 T L L+ KV + D D F+ + LK Sbjct: 103 TRLATRLREASMKVIGIGEKK-----TPDPFIVACDKFIYIEILK 142 >gi|166364770|ref|YP_001657043.1| hypothetical protein MAE_20290 [Microcystis aeruginosa NIES-843] gi|166087143|dbj|BAG01851.1| hypothetical protein MAE_20290 [Microcystis aeruginosa NIES-843] Length = 249 Score = 104 bits (260), Expect = 4e-21, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 51/175 (29%), Gaps = 29/175 (16%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M KIAL ID N AS ++ + Y + + Sbjct: 1 MRQSESKIALLIDADNAPAS--------KIEAIVSEIAKYGVANIRKAYGNWKSPALKAW 52 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118 + + ++F G K++ D + +DA + ++ L+ I Sbjct: 53 ----------EECLHEYAIRPVQQFDYTKG----KNATDAAMIIDAMDLLYTQQLDAFAI 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 S D FT LV + KV + F+ L + + Sbjct: 99 VSSDCDFTPLVMRILTNGLKVYGFGEKKTPLP-----FVYACSTFLYLETIDQAV 148 >gi|264680306|ref|YP_003280216.1| hypothetical protein CtCNB1_4174 [Comamonas testosteroni CNB-2] gi|262210822|gb|ACY34920.1| hypothetical conserved protein [Comamonas testosteroni CNB-2] Length = 293 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 32/174 (18%), Positives = 54/174 (31%), Gaps = 30/174 (17%) Query: 1 MFDP-REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 M + + +IAL ID N A ++L + ++ Y Sbjct: 1 MPNDVQPRIALLIDADNAPAEM--------IDEILTELSTFGLINIRRAYGNWTKAGLHG 52 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLV 117 + + + ++F + G K++ D+ + VDA E +E + Sbjct: 53 WQSKL----------LEYAVRPMQQFDYSKG----KNATDMAMTVDAMELLYTEKPDAFG 98 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 I S D FT LV L+ K V F+ LK Sbjct: 99 IVSSDADFTPLVMHLRAKGAAVYGFGAEQ-----TPRAFVNACSRFLYFDALKE 147 >gi|198282948|ref|YP_002219269.1| hypothetical protein Lferr_0812 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218667530|ref|YP_002425151.1| hypothetical protein AFE_0663 [Acidithiobacillus ferrooxidans ATCC 23270] gi|198247469|gb|ACH83062.1| protein of unknown function DUF88 [Acidithiobacillus ferrooxidans ATCC 53993] gi|218519743|gb|ACK80329.1| conserved hypothetical protein [Acidithiobacillus ferrooxidans ATCC 23270] Length = 318 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 41/171 (23%), Positives = 80/171 (46%), Gaps = 14/171 (8%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSR--AIVIRAYYYTTVVGDPEQ 58 M + I +++D N+ + G+ + Y L + A ++R Y V G+ + Sbjct: 1 MSNGELHIGVYVDAENIRYNG---GYAMRYDVLRRFAGREEEARLLRLNTYMAVDGERMK 57 Query: 59 Q----FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLE 114 + + + G++++ K + F + G K++ D++LAVD QSE L+ Sbjct: 58 RDREYRERIRGYQQAVRDLGWKIIEKPVRWFVDEEGNSMSKANADLDLAVDVMLQSERLD 117 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165 +++ +GDG F +V ALQ K +V +++ S +L+ +AD F Sbjct: 118 QVLLVTGDGDFLQVVRALQNKGCRVEVLAF-----RNVSRELQYEADAFYP 163 >gi|308272493|emb|CBX29097.1| hypothetical protein N47_J00780 [uncultured Desulfobacterium sp.] Length = 251 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 28/173 (16%), Positives = 50/173 (28%), Gaps = 29/173 (16%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + +K+A+ ID N S LL + + Y G + + Sbjct: 1 MEHTDKLAVLIDAENAQPSI--------VVGLLAEIANYGVASVKRIYGDWTGPGLKGWK 52 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIF 119 Q + ++F G K+S D + +DA + + I Sbjct: 53 ----------DVLLQYSIQPMQQFAYTKG----KNSTDSAMIIDAMDLLYTGNFNGFCIV 98 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 S D FT L + ++ V D F+ L+ + Sbjct: 99 SSDSDFTKLASRIRESGLLVYGFGEQK-----TPSAFVSACDKFIYTEVLRAK 146 >gi|146291809|ref|YP_001182233.1| hypothetical protein Sputcn32_0704 [Shewanella putrefaciens CN-32] gi|145563499|gb|ABP74434.1| protein of unknown function DUF88 [Shewanella putrefaciens CN-32] Length = 268 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 55/168 (32%), Gaps = 29/168 (17%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 +EKIA+FID N A +K + +L ++ Y + + Sbjct: 1 MQNKEKIAVFIDADN--APAKK------FDVVLAELAKHGLISIRKAYGNWKSPNLKPW- 51 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIF 119 + + ++F G K++ D+ L +DA + ++ ++ + + Sbjct: 52 ---------EDILHEYAIQPIQQFDLTKG----KNASDIALVIDAMDILYTKDIDIICLI 98 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 S D FT LV K V + F+ L Sbjct: 99 SSDCDFTPLVTRALADGKTVFGFGERKAPA-----AFVNSCSRFLYLD 141 >gi|32473273|ref|NP_866267.1| hypothetical protein RB4721 [Rhodopirellula baltica SH 1] gi|32397952|emb|CAD73953.1| conserved hypothetical protein [Rhodopirellula baltica SH 1] Length = 242 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 31/182 (17%), Positives = 55/182 (30%), Gaps = 31/182 (17%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 P IAL ID N +S ++ + IV Y + + Sbjct: 5 HPEGSIALLIDADNAPSS--------KIEFIISELATYGIVNIRKAYGNWTKRGLEGW-- 54 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFS 120 + + F G K++ D+ L +DA + + + + S Sbjct: 55 --------INVLHEYAIAPTQCFDLIKG----KNATDMALLIDAMDILYTRQVNTFGLVS 102 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 D FT LV L+ K+V S +F+ L + P + Sbjct: 103 SDCDFTPLVCRLREDGKQVIGFGRQNSPAP-----FVLACSHFIYLDE--EPTEKAPPKK 155 Query: 181 KK 182 ++ Sbjct: 156 RR 157 >gi|187735246|ref|YP_001877358.1| protein of unknown function DUF88 [Akkermansia muciniphila ATCC BAA-835] gi|187425298|gb|ACD04577.1| protein of unknown function DUF88 [Akkermansia muciniphila ATCC BAA-835] Length = 251 Score = 104 bits (260), Expect = 5e-21, Method: Composition-based stats. Identities = 37/165 (22%), Positives = 60/165 (36%), Gaps = 30/165 (18%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 +I + ID N + + KL++ +R ++ Y + + + S L Sbjct: 5 RIVVLIDADNTNLA--------NLEKLIQYISTRGRIVVKRAYGNWSENLKDKKSALQQ- 55 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGC 124 +GF K F G K++ D+ LA+DA + + VI S D Sbjct: 56 ------SGF----KTEHYFNCVPG----KNATDIALAIDAVDLLHKNSYDSFVIVSSDSD 101 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 FT L L+ V S AS+ R D F D+ + Sbjct: 102 FTPLSIYLKESGVYVIGFG-----KSNASEAFRNGCDEFKDIEKI 141 >gi|268611850|ref|ZP_06145577.1| hypothetical protein RflaF_20381 [Ruminococcus flavefaciens FD-1] Length = 303 Score = 104 bits (259), Expect = 6e-21, Method: Composition-based stats. Identities = 28/183 (15%), Positives = 59/183 (32%), Gaps = 29/183 (15%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + + A+ ID N+ ++K + +L + +V Y + Sbjct: 1 MEKEMRYAVLIDADNV--AAKYTKY------ILDEVSNYGVVTYKRVYGDWTRPNLAGWK 52 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIF 119 + ++++ G K++ D + +DA + S ++ I Sbjct: 53 NMALDNA----------ITPIQQYSYTTG----KNATDSAMIIDAMDILYSHNVDGFCIV 98 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 S D FT L L+ V + + ++ + F L L E + E Sbjct: 99 SSDSDFTRLAIRLRESGIHVIGMGERKTPKPFST-----ACNAFKYLEILAEEEVQGAGE 153 Query: 180 DKK 182 +K Sbjct: 154 TEK 156 >gi|254514031|ref|ZP_05126092.1| protein containing DUF88 [gamma proteobacterium NOR5-3] gi|219676274|gb|EED32639.1| protein containing DUF88 [gamma proteobacterium NOR5-3] Length = 254 Score = 104 bits (259), Expect = 6e-21, Method: Composition-based stats. Identities = 25/173 (14%), Positives = 53/173 (30%), Gaps = 29/173 (16%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + ++IAL ID N+ AS+ +L+ + V + + + Sbjct: 13 ILSETKRIALLIDCDNVRASA--------IEGVLEELATHGTVNVRHAHGDWNNPSLSGW 64 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118 + + ++F G K++ D + +DA + S ++ + Sbjct: 65 AEKLHPHA----------IRPMQQFAYTKG----KNATDSAMIIDAMDLLYSGNVDAFAL 110 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 + D FT LV + V + F+ + L Sbjct: 111 MTSDSDFTPLVLRILESGFPVYGFGEKKTPQP-----FVDSCSPFIFIENLLP 158 >gi|115397957|ref|XP_001214570.1| conserved hypothetical protein [Aspergillus terreus NIH2624] gi|114192761|gb|EAU34461.1| conserved hypothetical protein [Aspergillus terreus NIH2624] Length = 885 Score = 104 bits (259), Expect = 7e-21, Method: Composition-based stats. Identities = 25/162 (15%), Positives = 44/162 (27%), Gaps = 29/162 (17%) Query: 10 LFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDW 69 + ID N AS L +L Y + Sbjct: 641 ILIDADNAQASVVNL--------VLSEVAKYGTAHVKRAYGDWTSSNLLPWKA------- 685 Query: 70 LHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTT 127 + + ++F G K++ D + +DA + + + + S D FT Sbjct: 686 ---KLLEHSIQPVQQFAYTHG----KNATDSAMIIDAMDLLYANRFDGFCLVSSDSDFTR 738 Query: 128 LVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 L A ++ V + S D F+ L Sbjct: 739 LAARIRESGATVYGFGVHNTPKPFVS-----ACDKFIYTENL 775 >gi|167760471|ref|ZP_02432598.1| hypothetical protein CLOSCI_02845 [Clostridium scindens ATCC 35704] gi|167661837|gb|EDS05967.1| hypothetical protein CLOSCI_02845 [Clostridium scindens ATCC 35704] Length = 311 Score = 104 bits (259), Expect = 7e-21, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 55/168 (32%), Gaps = 29/168 (17%) Query: 9 ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68 AL ID N+ S+K + +L ++ Y + Sbjct: 7 ALLIDADNV--SAKY------IKPILTELSKYGVITYKRIYGDWTSTQNSSWK------- 51 Query: 69 WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDGCFT 126 ++F+ G K++ D + +DA + + ++ I S D FT Sbjct: 52 ---EELLTNSITPIQQFSYTQG----KNATDSAMIIDAMDILYTNDVDGFCIVSSDSDFT 104 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 LV+ ++ K V + + R+ D F L L NE Sbjct: 105 RLVSRIRESGKMVIGMGENKTPEP-----FRKACDKFTILENLLNEQE 147 >gi|113869484|ref|YP_727973.1| hypothetical protein H16_A3546 [Ralstonia eutropha H16] gi|113528260|emb|CAJ94605.1| uncharacterized conserved protein [Ralstonia eutropha H16] Length = 417 Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats. Identities = 23/167 (13%), Positives = 46/167 (27%), Gaps = 29/167 (17%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +A+ ID N + LL + Y + Sbjct: 12 LAVLIDADNAAPAI--------VEGLLAEVAKYGVAAVKRIYGDWTRPNLAGWK------ 57 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCF 125 + ++F G K++ D + +DA + + + I S D F Sbjct: 58 ----ERLLSHSIQPIQQFRYTVG----KNATDSAMIIDAMDLLYTGRFDGFCIVSSDSDF 109 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 T L + ++ + V + D F+ L+ + Sbjct: 110 TRLASRIREQGLTVYGFGERKTPKP-----FVTACDKFIYSDVLRAD 151 >gi|166033313|ref|ZP_02236142.1| hypothetical protein DORFOR_03039 [Dorea formicigenerans ATCC 27755] gi|166027670|gb|EDR46427.1| hypothetical protein DORFOR_03039 [Dorea formicigenerans ATCC 27755] Length = 308 Score = 103 bits (258), Expect = 9e-21, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 56/168 (33%), Gaps = 29/168 (17%) Query: 9 ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68 AL ID N+ S+K + +L + Y + Sbjct: 7 ALLIDADNV--SAKY------IKPILTELSKYGNITYKRIYGDWTNTQHSSWK------- 51 Query: 69 WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDGCFT 126 + ++F+ G K+S D + +DA + ++ ++ I S D FT Sbjct: 52 ---DELLKNSITPIQQFSYTQG----KNSTDSAMIIDAMDILYAKDVDGFCIVSSDSDFT 104 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 LV+ L+ K V + + R+ D F L L +E Sbjct: 105 RLVSRLRESGKMVIGMGENKTPEP-----FRKACDKFTILENLLSEKG 147 >gi|330983390|gb|EGH81493.1| hypothetical protein PLA107_00070 [Pseudomonas syringae pv. lachrymans str. M301315] Length = 294 Score = 103 bits (257), Expect = 9e-21, Method: Composition-based stats. Identities = 29/179 (16%), Positives = 56/179 (31%), Gaps = 29/179 (16%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 P IA+FID N +L + V + + Sbjct: 13 EQPAMNIAMFIDADNAPKG--------HIGDVLDELSNHGCVSIRRAFGNWRKQALDSW- 63 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIF 119 V+ + A + + + K++ D+ + DA + ++ + Sbjct: 64 -------------VPVLHQHAIQPVQVFDLIKGKNASDIAMCCDAMDVLYNKPVDVFCLV 110 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 S D FT LV L+ + K+V V A+ +F+ L + E++ Sbjct: 111 SSDSDFTPLVTKLRSEGKQVIGVGERK-----AAAAFVDACSFFIFLDDIAAEVSEAQA 164 >gi|257063827|ref|YP_003143499.1| hypothetical protein Shel_11150 [Slackia heliotrinireducens DSM 20476] gi|256791480|gb|ACV22150.1| uncharacterized conserved protein [Slackia heliotrinireducens DSM 20476] Length = 314 Score = 103 bits (257), Expect = 9e-21, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 53/165 (32%), Gaps = 29/165 (17%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 KIAL IDG N+ A+ +L Y + + Sbjct: 5 KIALLIDGDNVSANY--------IGSILDELTETGTTTIKRIYGDWTRPEMRSWRDQL-- 54 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDGC 124 G V + ++F+ G K++ D L +DA + ++ I S D Sbjct: 55 ------LGRSV--QPVQQFSNVSG----KNATDSALIIDAMDILYGRDVDAFCIVSSDSD 102 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 FT L + L K V + D R F++L L Sbjct: 103 FTRLASRLTESGKVVIGMGEEK-----TPDAFRNACTKFVNLENL 142 >gi|117922000|ref|YP_871192.1| hypothetical protein Shewana3_3564 [Shewanella sp. ANA-3] gi|117614332|gb|ABK49786.1| protein of unknown function DUF88 [Shewanella sp. ANA-3] Length = 268 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 52/168 (30%), Gaps = 29/168 (17%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 +EKIA+FID N A D +L ++ Y + + Sbjct: 1 MQNKEKIAVFIDADN------APARKFD--VVLAELAKHGLISIRKAYGNWKSPNLKPW- 51 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIF 119 + + ++F G K++ D+ L +D + ++ ++ + + Sbjct: 52 ---------EEILHEYAIQPIQQFDLTKG----KNASDIALVIDVMDILYTKDIDIICLI 98 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 S D FT LV K V + F+ L Sbjct: 99 SSDCDFTPLVTRALADGKTVFGFGERKAPA-----AFVNSCSRFLYLD 141 >gi|153854120|ref|ZP_01995428.1| hypothetical protein DORLON_01419 [Dorea longicatena DSM 13814] gi|149753169|gb|EDM63100.1| hypothetical protein DORLON_01419 [Dorea longicatena DSM 13814] Length = 309 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 33/166 (19%), Positives = 55/166 (33%), Gaps = 29/166 (17%) Query: 9 ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68 AL ID N+ S+K + +L I+ Y + Sbjct: 7 ALLIDADNV--SAKY------IKPILTELSKYGIITYKRIYGDWTSTQHSSWK------- 51 Query: 69 WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDGCFT 126 ++F+ G K+S D + +DA + + ++ I S D FT Sbjct: 52 ---DELLTNSITPIQQFSYTQG----KNSTDSAMIIDAMDILYTNDVDGFCIVSSDSDFT 104 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 LV+ L+ K V + + R+ D F L L +E Sbjct: 105 RLVSRLRESGKMVIGMGENKTPEP-----FRKACDKFTILENLMSE 145 >gi|291297150|ref|YP_003508548.1| hypothetical protein Mrub_2781 [Meiothermus ruber DSM 1279] gi|290472109|gb|ADD29528.1| protein of unknown function DUF88 [Meiothermus ruber DSM 1279] Length = 190 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 44/170 (25%), Positives = 81/170 (47%), Gaps = 17/170 (10%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 K ALFIDG+ +Y ++K LG++ID+RK + F + A+YY V +++ Sbjct: 2 KTALFIDGSYMYDAAKRLGWNIDHRKAIGVFSKPEDLYNAFYYAPVTDSNDERQQK---F 58 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126 LD L + G+ V ++ + +A D + E V+ SG G Sbjct: 59 LDALVFMGYTVRSR----------ETHGDPRFEAMIATDLLVTAPRWERAVVASGSGDLA 108 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 ++AL+ + K++ ++ P + +LR Q+D ++DL L+ ++ R Sbjct: 109 HTLSALRAQGKEIHLL----GVPELTDLELRNQSDRYLDLRELQAQLERT 154 >gi|331700009|ref|YP_004336248.1| hypothetical protein Psed_6296 [Pseudonocardia dioxanivorans CB1190] gi|326954698|gb|AEA28395.1| Domain of unknown function DUF88 [Pseudonocardia dioxanivorans CB1190] Length = 367 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 42/174 (24%), Positives = 65/174 (37%), Gaps = 23/174 (13%) Query: 1 MFDPREKIALFIDGANLYASSKA-LGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58 M E+IALF+D NL ++ LG D+ + A R V+ Y Sbjct: 1 MISDDERIALFLDYENLAIGAREGLGVSPFDFGPIADALAERGRVVARRAYA-------- 52 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG---LEH 115 +S L +++ + K++ D++LAVDA E + + Sbjct: 53 DWSYFDDDRRLLARAQVELIEIPQR------LGGSRKNAADIKLAVDAIELAYERGFVTT 106 Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 I +GD FT LV L+ K+V + S S L D F+ L Sbjct: 107 FAIGTGDSDFTPLVHKLREMDKRVIGI----GVQSSTSALLPPACDEFLFYDRL 156 >gi|84684164|ref|ZP_01012066.1| hypothetical protein 1099457000262_RB2654_16986 [Maritimibacter alkaliphilus HTCC2654] gi|84667917|gb|EAQ14385.1| hypothetical protein RB2654_16986 [Rhodobacterales bacterium HTCC2654] Length = 234 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 32/184 (17%), Positives = 59/184 (32%), Gaps = 29/184 (15%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M + + +A+ ID N+ A +LK + Y + Sbjct: 1 MPETKPLLAVLIDADNIPARFAD--------GVLKEITTYGEPALRRVYGDWSSQRLGPW 52 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVI 118 ++ +E G K++ D+ L +DA + + V+ Sbjct: 53 KSKVQ----------ELGMVAHQESANTKG----KNASDIGLVIDAMDLLHTGRFDGFVL 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 S D FT L ++ + V + + LR F+ + + +E A P Sbjct: 99 VSSDSDFTALANRIREQGLTVIGIGEGK-----TPESLRNVCSRFVMIENIVDEEAEKPA 153 Query: 179 EDKK 182 E KK Sbjct: 154 EKKK 157 >gi|197301939|ref|ZP_03167003.1| hypothetical protein RUMLAC_00661 [Ruminococcus lactaris ATCC 29176] gi|197299007|gb|EDY33543.1| hypothetical protein RUMLAC_00661 [Ruminococcus lactaris ATCC 29176] Length = 322 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 32/170 (18%), Positives = 56/170 (32%), Gaps = 29/170 (17%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 ++ AL ID N+ S+K + +L V Y + Sbjct: 2 EDRFALLIDADNV--SAKY------IKPILDELSKYGNVTYKRIYGDWTKTNNASWK--- 50 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122 Q ++F+ G K++ D + +DA + + LE + S D Sbjct: 51 -------EELLQNSITPIQQFSYTHG----KNATDSAMIIDAMDMLYTSELEGFCLVSSD 99 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 FT L + L+ K V + + R+ D F +L L + Sbjct: 100 SDFTKLASRLRESGKTVIGMGEGKTPSP-----FRKACDIFTELELLLED 144 >gi|147920970|ref|YP_685221.1| hypothetical protein RCIX466 [uncultured methanogenic archaeon RC-I] gi|110620617|emb|CAJ35895.1| conserved hypothetical protein [uncultured methanogenic archaeon RC-I] Length = 254 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 26/178 (14%), Positives = 51/178 (28%), Gaps = 29/178 (16%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 + IA+ IDG N S ++L V Y + Sbjct: 10 SNKNIAMLIDGDNAQPSL--------IEEMLSEAGKYGNVTVRRIYGDWTMSSMNSWKDY 61 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSG 121 + + ++F G K++ D + +DA + + ++ I S Sbjct: 62 LH----------KHAFQPIQQFRYTKG----KNATDSAMIIDAMDILYAGHVDGFCIVSS 107 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 D +T L L+ V + + F + L + P++ Sbjct: 108 DSDYTKLATRLRESGLFVMGIG-----RKDTPQSFVKACVIFTFVENLSPDEEETPEK 160 >gi|322704309|gb|EFY95906.1| hypothetical protein MAA_08714 [Metarhizium anisopliae ARSEF 23] Length = 251 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 27/169 (15%), Positives = 49/169 (28%), Gaps = 29/169 (17%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 K+A+ ID N + + LL Y G + + Sbjct: 8 KLAVLIDADNAQPNMAGV--------LLAEIAKYGTAFVKRAYGDWTGTNLRGWK----- 54 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124 + ++F G K+S D + +DA + S + + S D Sbjct: 55 -----EQLLENSILPIQQFAYTQG----KNSTDAAMVIDAMDLLYSNRFDGFCLVSSDSD 105 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 FT L + ++ V + L D F+ + L + Sbjct: 106 FTRLASRIRESGLLVYGFGERKAPK-----ALVSACDKFIYIENLSQNV 149 >gi|71066424|ref|YP_265151.1| hypothetical protein Psyc_1869 [Psychrobacter arcticus 273-4] gi|71039409|gb|AAZ19717.1| conserved hypothetical protein [Psychrobacter arcticus 273-4] Length = 335 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 27/170 (15%), Positives = 48/170 (28%), Gaps = 29/170 (17%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +K A+ ID N S +L+ I Y + Q + Sbjct: 1 MKKFAVLIDADNSSHRS--------IEPILEEIAKYGIASIKRIYGDWSIEALQSWRDKL 52 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGD 122 ++F K + D++L +DA + + ++ I S D Sbjct: 53 LPNA----------ITPVQQFAYVS----QKDATDMKLVIDAMDILYAGDVDGFCIVSSD 98 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 FT L + ++ V D F+ + L E Sbjct: 99 SDFTPLASRIRESGLLVYGFG-----KKSTVKSFVNACDKFVYVENLLPE 143 >gi|255292460|dbj|BAH89576.1| hypothetical protein [uncultured bacterium] Length = 238 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 28/183 (15%), Positives = 60/183 (32%), Gaps = 29/183 (15%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M + ++KIALFID N AS + +L +V Y + + Sbjct: 1 MNELKQKIALFIDADNAPAS--------KFEDVLSEVAKYGVVTIRKAYGNWKSPTLRPW 52 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVI 118 + + +++ + K++ D+ L +DA + ++ ++ + Sbjct: 53 ----------EELLHEYAIQPVQQYD----LTKRKNASDIALVIDAMDVMYTKDIDVMCF 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 S D FT + + K V + F+ L + ++ Sbjct: 99 ISSDCDFTPMATRAIAEGKVVLGFGERKTPLP-----FVNACSKFLFLDQPDSVEEKNVS 153 Query: 179 EDK 181 + K Sbjct: 154 KPK 156 >gi|288939925|ref|YP_003442165.1| hypothetical protein Alvin_0164 [Allochromatium vinosum DSM 180] gi|288895297|gb|ADC61133.1| protein of unknown function DUF88 [Allochromatium vinosum DSM 180] Length = 277 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 35/162 (21%), Positives = 75/162 (46%), Gaps = 13/162 (8%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRS-RAIVIRAYYYTTVVGDPEQQF----S 61 ++ +F+D N+ + G+ + Y L + ++ R Y + ++ Sbjct: 6 RVGVFVDAENVRYNG---GYQMRYDILRRFAAREGGVLQRLNTYMAYDAERAREDYEYKK 62 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 H + G+++ AK + +T++ G K++ D+++AVDA Q+ L+ +++ +G Sbjct: 63 KAHAYQQMVRDFGWKITAKTVRRYTDDNGNVTTKANADLDMAVDAMLQANRLDQVLLVTG 122 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163 DG F +V ALQ +V ++ S L+++ D F Sbjct: 123 DGDFLQVVEALQNTGCRVELIGF-----KNVSRLLQQRVDAF 159 >gi|153011951|ref|YP_001373163.1| hypothetical protein Oant_4745 [Ochrobactrum anthropi ATCC 49188] gi|151563839|gb|ABS17334.1| protein of unknown function DUF88 [Ochrobactrum anthropi ATCC 49188] Length = 246 Score = 103 bits (257), Expect = 1e-20, Method: Composition-based stats. Identities = 29/174 (16%), Positives = 55/174 (31%), Gaps = 30/174 (17%) Query: 1 MFDPR-EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 M +PR ++A+ ID N AS+K + L + Y + Sbjct: 1 MAEPRSPRLAVLIDADN--ASAKIV------DGLFEEIAKIGEASVRRIYGDFANPRSKA 52 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLV 117 + + ++F G K++ D+ L +DA + S + Sbjct: 53 W----------IDVLARHAIIPQQQFAYTAG----KNASDITLVIDAMDLLHSGRFDGFC 98 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 + S D FT L + ++ + V + R+ F+ L Sbjct: 99 LVSSDSDFTRLASRIREQGIDVFGFGEQK-----TPESFRQACRRFIYTENLLP 147 >gi|78188294|ref|YP_378632.1| hypothetical protein Cag_0316 [Chlorobium chlorochromatii CaD3] gi|78170493|gb|ABB27589.1| conserved hypothetical protein [Chlorobium chlorochromatii CaD3] Length = 264 Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 26/182 (14%), Positives = 52/182 (28%), Gaps = 29/182 (15%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 + ++A+ ID N A+ LL Y + + Sbjct: 6 EKTVRLAVLIDADNTQANI--------IDGLLAEVAKYGTASVKRIYGDWTSPSLRSWK- 56 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 + + ++F G K++ D + +DA + + I S Sbjct: 57 ---------EMLLEHSIQPIQQFGYTKG----KNATDSAMIIDAMDLLYTGKFHGFCIVS 103 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 D FT L + ++ V D F+ + L+ +I + Sbjct: 104 SDSDFTKLASRIREAGLVVYGFGEKK-----TPSAFVSACDKFIYIEVLRAKINDNEQIA 158 Query: 181 KK 182 +K Sbjct: 159 RK 160 >gi|325264389|ref|ZP_08131120.1| hypothetical protein HMPREF0240_03396 [Clostridium sp. D5] gi|324030460|gb|EGB91744.1| hypothetical protein HMPREF0240_03396 [Clostridium sp. D5] Length = 321 Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 58/178 (32%), Gaps = 31/178 (17%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +K AL ID N+ S+K + +L V Y + Sbjct: 2 EDKYALLIDADNV--SAKY------IKPILDELSKYGNVTYKRIYGDWTSTYNSSWK--- 50 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122 Q ++F+ G K++ D + +DA + + LE + S D Sbjct: 51 -------EELLQNSITPIQQFSYTHG----KNATDSAMIIDAMDMLYTSELEGFCLVSSD 99 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE--IARDPD 178 FT L + L+ K V + + R+ D F L L + I ++ Sbjct: 100 SDFTKLASRLRESGKTVIGMGEDKTPAP-----FRKACDIFTVLELLLEDNTIEKEEK 152 >gi|16330259|ref|NP_440987.1| hypothetical protein slr1870 [Synechocystis sp. PCC 6803] gi|1652748|dbj|BAA17667.1| slr1870 [Synechocystis sp. PCC 6803] Length = 249 Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 29/176 (16%), Positives = 52/176 (29%), Gaps = 30/176 (17%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M IAL ID N AS ++ + Y + + Sbjct: 1 MPQSESNIALLIDADNAPAS--------KIEAIVSEIAKYGVANIRKAYGNWKSPNLKAW 52 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118 + + ++F G K++ D + +DA + ++ L+ I Sbjct: 53 ----------EECLHEYAIRPVQQFDYTKG----KNATDAAMIIDAMDLLYTQRLDAFAI 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 S D FT LV + KV + F+ L + ++I Sbjct: 99 VSSDCDFTPLVMRILTNGLKVYGFGEKKTPLP-----FVYACSTFLYLESI-DQIE 148 >gi|330943352|gb|EGH45725.1| hypothetical protein PSYPI_26829 [Pseudomonas syringae pv. pisi str. 1704B] Length = 264 Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 33/171 (19%), Positives = 57/171 (33%), Gaps = 31/171 (18%) Query: 1 MFDPREK--IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58 M + + +A+FID N A SK LG +L S V Y Sbjct: 1 MSNQLQNLNVAMFIDADN--APSKKLG------SVLAELASYGAVSIRRAYGNWKSPSLD 52 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHL 116 + + + + ++F G K++ D+ +AVDA + ++ Sbjct: 53 PWGKVLH----------EHAIQPVQQFDLVKG----KNATDMAMAVDAMDVLFNKPVDVF 98 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 + S D FT LV L+ + K+V + F+ Sbjct: 99 CLVSSDCDFTPLVMRLRAEGKQVVGFGERKAPEP-----FVNACSRFLYFD 144 >gi|291515800|emb|CBK65010.1| Protein of unknown function DUF88 [Alistipes shahii WAL 8301] Length = 272 Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 22/171 (12%), Positives = 48/171 (28%), Gaps = 29/171 (16%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M +K A+ +D N+ + +L + Y Sbjct: 1 MELNDKKFAVLVDADNISHR--------KIKDILDEIANYGTPTIKRIYGDFTNPK---- 48 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVI 118 + +++ G K++ D L +DA + + I Sbjct: 49 ------FAAWKEVLLENSITPIQQYAYTTG----KNATDSALIIDAMDILHKEGVNGFCI 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 S D +T L + ++ ++V + + D F+ + L Sbjct: 99 VSSDSDYTRLASRIRESGREVLGFGEKKTPKP-----FIKSCDKFIYVEIL 144 >gi|146340536|ref|YP_001205584.1| hypothetical protein BRADO3579 [Bradyrhizobium sp. ORS278] gi|146193342|emb|CAL77358.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278] Length = 263 Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 27/169 (15%), Positives = 55/169 (32%), Gaps = 29/169 (17%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 ++A+ ID N AS+K + L + Y + ++ Sbjct: 8 PRLAVLIDADN--ASAKIV------DGLFEEIAKIGEASVRRIYGDFSSPRSKPWADTLA 59 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDG 123 + ++F G K++ D+ L +DA + S + + S D Sbjct: 60 ----------RHAIVPQQQFAYTTG----KNASDITLVIDAMDLLHSGRFDGFCLVSSDS 105 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 FT L A ++ + V + R+ F+ L+++ Sbjct: 106 DFTRLAARIREQGIDVFGFGEQK-----TPESFRQACRRFIYTENLRSD 149 >gi|266625430|ref|ZP_06118365.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479] gi|288862663|gb|EFC94961.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479] Length = 306 Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 59/171 (34%), Gaps = 29/171 (16%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +K A+ ID N+ S+K + + +L ++ Y ++ Sbjct: 2 NDKKFAVLIDSDNI--SAKYISY------ILDEMTKYGVITYKRIYGDWTSSQMGKWKQ- 52 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSG 121 + ++F+ G K++ D L +DA + ++ ++ I S Sbjct: 53 ---------ELLENSITPIQQFSNTVG----KNATDSALIIDAMDLLYTDNVDGFCIVSS 99 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 D FT L + L+ K+V + R F +L L ++ Sbjct: 100 DSDFTKLASRLRESGKEVIGMGEEK-----TPKSFRAACTVFTNLEILLDQ 145 >gi|152992773|ref|YP_001358494.1| hypothetical protein SUN_1182 [Sulfurovum sp. NBC37-1] gi|151424634|dbj|BAF72137.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1] Length = 249 Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 52/171 (30%), Gaps = 29/171 (16%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M + IALFID N+ S ++ +V Y D + + Sbjct: 1 MTKKEDHIALFIDCDNISHRS--------IEGIINELSKYGVVNIRQAYGNWTKDNLKNW 52 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVI 118 + K ++F + K++ D+ + +DA + ++ Sbjct: 53 ----------EDKLLEFAIKPIQQFDYSKN----KNATDILMTIDAIDLLHTKDIDAFAF 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 + D FT +V +Q + KV + F+ L Sbjct: 99 ATSDSDFTPVVMRVQAEGIKVFGFGEKKTPKP-----FMAACSQFIFTEKL 144 >gi|148255393|ref|YP_001239978.1| hypothetical protein BBta_4005 [Bradyrhizobium sp. BTAi1] gi|146407566|gb|ABQ36072.1| hypothetical protein BBta_4005 [Bradyrhizobium sp. BTAi1] Length = 263 Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 30/177 (16%), Positives = 58/177 (32%), Gaps = 29/177 (16%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 ++A+ ID N AS+K + L + Y + ++ Sbjct: 8 PRLAVLIDADN--ASAKIV------DGLFEEIAKIGEASVRRIYGDFSSPRSKPWADTLA 59 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDG 123 + ++F G K++ D+ L +DA + S + + S D Sbjct: 60 ----------RHAIVPQQQFAYTTG----KNASDITLVIDAMDLLHSGRFDGFCLVSSDS 105 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 FT L A ++ + V + R+ F+ L+++ A D D Sbjct: 106 DFTRLAARIREQGIDVFGFGEQK-----TPESFRQACRRFIYTENLRSDAASSKDAD 157 >gi|114319473|ref|YP_741156.1| hypothetical protein Mlg_0311 [Alkalilimnicola ehrlichii MLHE-1] gi|114225867|gb|ABI55666.1| protein of unknown function DUF88 [Alkalilimnicola ehrlichii MLHE-1] Length = 274 Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 41/169 (24%), Positives = 80/169 (47%), Gaps = 13/169 (7%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA-IVIRAYYYTTVVGDPEQQ 59 M + + +++D AN+ + GF + Y L + IR Y T ++ Sbjct: 1 MAGSQGGVGIYVDAANIQMNG---GFGMQYDVLREFACRTGAEPIRLNAYVTYDEQRAER 57 Query: 60 F----SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEH 115 ++ + G++V+ K + + + G K++ D+++AVDA QS+ L Sbjct: 58 DRGYHQRVNNFFQSIREFGYKVIIKKYRWYRDEEGNAYAKANADLDMAVDALLQSQSLTR 117 Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 +++ +GDG F +V ALQ + +V +++ S +LRR+AD F+ Sbjct: 118 VMMVTGDGDFVQVVRALQNQGCRVELLAFD-----NISSELRREADVFV 161 >gi|67904058|ref|XP_682285.1| hypothetical protein AN9016.2 [Aspergillus nidulans FGSC A4] gi|40745192|gb|EAA64348.1| hypothetical protein AN9016.2 [Aspergillus nidulans FGSC A4] Length = 404 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 25/172 (14%), Positives = 47/172 (27%), Gaps = 30/172 (17%) Query: 1 MFDPR-EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 M + + + +D N S+ L +L V Y + Sbjct: 143 MANNTTPNLVVLVDADNAMPSTARL--------ILAEVAKYGTVYVKRAYGDWTSTSLKG 194 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLV 117 + + ++F G K+S D + +DA + S Sbjct: 195 WKK----------ELLSQSIQPFQQFAYTNG----KNSTDSAMIIDAMDLLYSNRFGGFC 240 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 + S D FT L A ++ V + + + F+ L Sbjct: 241 LVSSDSDFTRLAARIRESGLTVYGFGEQKTPKPFVA-----ACNKFIYTENL 287 >gi|46578508|ref|YP_009316.1| hypothetical protein DVU0091 [Desulfovibrio vulgaris str. Hildenborough] gi|120603909|ref|YP_968309.1| hypothetical protein Dvul_2871 [Desulfovibrio vulgaris DP4] gi|46447919|gb|AAS94575.1| conserved hypothetical protein [Desulfovibrio vulgaris str. Hildenborough] gi|120564138|gb|ABM29882.1| conserved hypothetical protein [Desulfovibrio vulgaris DP4] gi|311232435|gb|ADP85289.1| protein of unknown function DUF88 [Desulfovibrio vulgaris RCH1] Length = 240 Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats. Identities = 29/179 (16%), Positives = 50/179 (27%), Gaps = 30/179 (16%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 ++A+ ID N A + LL + Y Q + Sbjct: 2 RLAVLIDADNAKADA--------ISDLLAEVSKFGVATVKRAYGDWTTTNLQGWKKQLH- 52 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124 + + ++F+ G K+S D + +D + + + I S D Sbjct: 53 ---------KYAIQPMQQFSYTRG----KNSTDASMIIDGMDLLYTGNFDGFCIVSSDCD 99 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL-KNEIARDPDEDKK 182 FT L + V + + D F+ L K E P K Sbjct: 100 FTRLATRFREAGLSVYGFGEKKTPEPFVA-----ACDRFIFTEILGKGETQEKPAATGK 153 >gi|257791681|ref|YP_003182287.1| hypothetical protein Elen_1934 [Eggerthella lenta DSM 2243] gi|317487854|ref|ZP_07946446.1| hypothetical protein HMPREF1023_00144 [Eggerthella sp. 1_3_56FAA] gi|325830636|ref|ZP_08164057.1| hypothetical protein HMPREF9404_5483 [Eggerthella sp. HGA1] gi|257475578|gb|ACV55898.1| protein of unknown function DUF88 [Eggerthella lenta DSM 2243] gi|316912980|gb|EFV34497.1| hypothetical protein HMPREF1023_00144 [Eggerthella sp. 1_3_56FAA] gi|325487382|gb|EGC89824.1| hypothetical protein HMPREF9404_5483 [Eggerthella sp. HGA1] Length = 552 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 54/171 (31%), Gaps = 29/171 (16%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 ++ AL ID N+ S+K + + V Y ++ Sbjct: 7 SEKRFALLIDADNV--SAKY------IKPITDELSKYGTVTYKRIYGDWTLTLHAKWK-- 56 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSG 121 + ++F G + K++ D + +DA + + +E I S Sbjct: 57 --------DALLENSITPIQQF----GYTQGKNATDSAMIIDAMDILYTRSVEGFCIVSS 104 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 D FT L + ++ V + + R+ D F L L + Sbjct: 105 DSDFTRLASRIRESGLTVIGMGEKKTPTP-----FRKACDIFTTLELLLGD 150 >gi|325267846|ref|ZP_08134496.1| protein of hypothetical function DUF88 [Kingella denitrificans ATCC 33394] gi|324980727|gb|EGC16389.1| protein of hypothetical function DUF88 [Kingella denitrificans ATCC 33394] Length = 244 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 28/184 (15%), Positives = 56/184 (30%), Gaps = 29/184 (15%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M +AL ID N A ID+ ++ + V+ Y D + + Sbjct: 1 MEKSNLIVALLIDADN------APAKKIDF--IMSELANYGSVMVRKIYGNWKDDRLKSW 52 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVI 118 ++F G K++ D+ + +D + ++ + Sbjct: 53 ----------ENVLLDYALAPVQQFDYTKG----KNATDMAMTIDVMDLLFLNKVDVFCL 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 S D FT L ++ K+V L F+ L ++ A Sbjct: 99 VSSDCDFTPLAMRIKASGKQVIGFGEHK-----TPKSLVAACSKFLFLDNAQSRTAPTEQ 153 Query: 179 EDKK 182 + ++ Sbjct: 154 QVQR 157 >gi|99080500|ref|YP_612654.1| hypothetical protein TM1040_0659 [Ruegeria sp. TM1040] gi|99036780|gb|ABF63392.1| protein of unknown function DUF88 [Ruegeria sp. TM1040] Length = 262 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 56/171 (32%), Gaps = 28/171 (16%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +A+ ID N+ S+K G + S Y G Q +S Sbjct: 10 LAVLIDADNI--SAKFAGAMF------EEIASLGEASIRRIYGDFSGGGPQGWSKDKLAA 61 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDGCF 125 ++F G K++ D+ L +DA + S + V+ S D F Sbjct: 62 FA---------IVPHQQFANTTG----KNASDIALVIDAMDILHSGRFDGFVLISSDSDF 108 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 T L + ++ + V + R F+ + L E+ +D Sbjct: 109 TRLASRIREQGLDVYGMGMRK-----TPAAFVRACKRFIYVENLLTEVPKD 154 >gi|291550583|emb|CBL26845.1| Uncharacterized conserved protein [Ruminococcus torques L2-14] Length = 339 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 60/181 (33%), Gaps = 31/181 (17%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 ++ AL ID N+ S+K + +L V Y + Sbjct: 2 EDRFALLIDADNV--SAKY------IKPILDELSKYGNVTYKRIYGDWTKSNSASWK--- 50 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122 Q ++F+ G K+S D + +DA + + LE + S D Sbjct: 51 -------EELLQNSITPIQQFSYTQG----KNSTDSAMIIDAMDMLYTSELEGFCLVSSD 99 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE--IARDPDED 180 FT L + L+ K V + + R+ D F L L + I ++ E Sbjct: 100 SDFTKLASRLRESGKMVIGMGEDKTPLP-----FRKACDIFTVLEVLLEDNTIEKEESEG 154 Query: 181 K 181 K Sbjct: 155 K 155 >gi|326319000|ref|YP_004236672.1| hypothetical protein Acav_4221 [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375836|gb|ADX48105.1| Domain of unknown function DUF88 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 298 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 28/163 (17%), Positives = 50/163 (30%), Gaps = 29/163 (17%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 +IAL ID N A ++L + ++ Y + Sbjct: 14 RIALLIDADNAPAEM--------IDEILTELSTLGVISIRRAYGNWTKSALSGWQSKL-- 63 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124 + + ++F + K++ D+ + VDA E ++ + I S D Sbjct: 64 --------LEFAVRPIQQFDYSK----RKNATDMAMTVDAMELLYTDRPDAFGIVSSDAD 111 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 FT LV L+ K V + F+ L Sbjct: 112 FTPLVMHLRAKGAAVYGFGAQQTPRP-----FVNACSRFLYLE 149 >gi|227824978|ref|ZP_03989810.1| conserved hypothetical protein [Acidaminococcus sp. D21] gi|226905477|gb|EEH91395.1| conserved hypothetical protein [Acidaminococcus sp. D21] Length = 262 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 33/178 (18%), Positives = 54/178 (30%), Gaps = 29/178 (16%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + +K AL ID N+ ID +L + VI Y + Sbjct: 1 MEQDKKFALLIDAENI------SPQYIDI--ILSEANNLGNVIYKRIYGNWTSPQMGSWK 52 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIF 119 + ++++ G K+S D L +D + L+ I Sbjct: 53 STILDNA----------IQPVQQYSNTSG----KNSSDSALIIDTMDLLYRTQLDGFCIV 98 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 S D FT L + L+ K V + + F+ L L E R+ Sbjct: 99 SSDSDFTRLASRLRESDKYVLGMGESK-----TPRSFISACNRFLYLDVLYAESKRED 151 >gi|300770545|ref|ZP_07080424.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC 33861] gi|300763021|gb|EFK59838.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC 33861] Length = 276 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 60/186 (32%), Gaps = 31/186 (16%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M D + IA+ IDG N AS ++L+ Y + Sbjct: 18 MNDSKFNIAVLIDGDNAQASL--------IKELIAEVSKYGKATIRRIYGDWTSPQMNSW 69 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVI 118 + + ++F+ G K+S D L +DA + + ++ I Sbjct: 70 KDILN----------EYSINPIQKFSYTSG----KNSTDSSLIIDAMDILHGKSVDGFCI 115 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL--KNEIARD 176 S D +T L ++ + V + + + F L EIA Sbjct: 116 VSSDSDYTGLAKRIREEGLFVMGIG-----RKITPIAFVNSCEIFTFTENLVEVEEIAAI 170 Query: 177 PDEDKK 182 P ++KK Sbjct: 171 PADNKK 176 >gi|87200042|ref|YP_497299.1| hypothetical protein Saro_2026 [Novosphingobium aromaticivorans DSM 12444] gi|87135723|gb|ABD26465.1| hypothetical protein Saro_2026 [Novosphingobium aromaticivorans DSM 12444] Length = 270 Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats. Identities = 31/175 (17%), Positives = 57/175 (32%), Gaps = 31/175 (17%) Query: 1 MFDPR--EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58 M + ++A+ ID N AS+K L + Y G + Sbjct: 1 MTNETRPPRLAVLIDADN--ASAKIA------TGLFEEVAKLGEASVRRIYGDFSGTRLK 52 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHL 116 ++ V+A+ A + +N K++ D+ L +DA + S + Sbjct: 53 AWA--------------DVLARHAIKAQQNFAYTSGKNASDIALVIDAMDLLHSGRFDGF 98 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 + S D FT L A ++ + V + R+ F+ L Sbjct: 99 CLVSSDSDFTGLAARIREQGLDVYGFGEKK-----TPESFRQACKRFIYTENLLE 148 >gi|254464182|ref|ZP_05077593.1| protein containing DUF88 [Rhodobacterales bacterium Y4I] gi|206685090|gb|EDZ45572.1| protein containing DUF88 [Rhodobacterales bacterium Y4I] Length = 245 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 30/177 (16%), Positives = 56/177 (31%), Gaps = 28/177 (15%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +A+ ID N+ S+K D S Y G Q + Sbjct: 10 LAVLIDADNI--SAKYAEAMFD------EIASFGEASIRRIYGDFAGGSPQGW------- 54 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDGCF 125 + ++F G K++ D+ L +DA + S + V+ S D F Sbjct: 55 --NKEKLAALAIVPHQQFANTTG----KNASDIALVIDAMDILHSGRFDGFVLISSDSDF 108 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182 T L + ++ + V + + F+ + L + + + KK Sbjct: 109 TRLASRIREQGLDVYGMGMRK-----TPAAFVKACKRFIYVENLLEDPGKSKPKAKK 160 >gi|299133322|ref|ZP_07026517.1| protein of unknown function DUF88 [Afipia sp. 1NLS2] gi|298593459|gb|EFI53659.1| protein of unknown function DUF88 [Afipia sp. 1NLS2] Length = 245 Score = 102 bits (254), Expect = 2e-20, Method: Composition-based stats. Identities = 25/168 (14%), Positives = 48/168 (28%), Gaps = 29/168 (17%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 + A+ ID N L + Y + ++ + Sbjct: 8 PRFAVLIDADNTSPQIT--------EGLFEEIAKFGEASVRRIYGDFSSSRLKSWADILQ 59 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDG 123 + ++F G K++ D+ L +DA + S + + S D Sbjct: 60 ----------RHAIDPYQQFAYTKG----KNASDIALVIDAMDLLHSGRFDGFCLVSSDS 105 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 FT L + L+ + V T + R+ F+ L Sbjct: 106 DFTRLASRLREQGADVYGFGTQK-----TPESFRQACRRFVYTENLLP 148 >gi|254439173|ref|ZP_05052667.1| conserved hypothetical protein [Octadecabacter antarcticus 307] gi|198254619|gb|EDY78933.1| conserved hypothetical protein [Octadecabacter antarcticus 307] Length = 233 Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 56/171 (32%), Gaps = 29/171 (16%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M D R +A+ ID N+ ++ +LK Y + + Sbjct: 1 MSDVRPLLAVLIDADNVP--ARHA------EAILKEISGIGEPALRRVYGDWSSISLKGW 52 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVI 118 + +V+ ++ + + K++ D+ L +DA + + VI Sbjct: 53 T--------------EVIPELGLVARQETANTKQKNASDIGLVIDAMDILHGGKFDGFVI 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 S D FT L L+ + V + LR + F+ + L Sbjct: 99 VSSDSDFTGLANRLREDGRTVIGIGEAK-----TPQSLRNVCNRFIFIENL 144 >gi|229819539|ref|YP_002881065.1| protein of unknown function DUF88 [Beutenbergia cavernae DSM 12333] gi|229565452|gb|ACQ79303.1| protein of unknown function DUF88 [Beutenbergia cavernae DSM 12333] Length = 378 Score = 102 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 37/175 (21%), Positives = 67/175 (38%), Gaps = 23/175 (13%) Query: 2 FDPREKIALFIDGANLYASSKAL--GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 D E++A+F+D NL ++ G D+ + A R V+ Y Sbjct: 1 MDADERLAVFLDYENLALGAREHLGGMAFDFGPIADALAVRGRVVVRRAYA--------D 52 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHL 116 +S L + +++ + K++ D+++ VDA E + E + Sbjct: 53 WSYFDDDRRALTRHQVELIEMPQRM------GASRKNAADIKMVVDAIEMAFEREYISTF 106 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 V+ +GD F+ LV L+ K+V V + S L D F+ L+ Sbjct: 107 VMCTGDSDFSPLVHKLRELNKRVIGV----GVENSTSRLLPPACDEFLFYDRLEG 157 >gi|89894266|ref|YP_517753.1| hypothetical protein DSY1520 [Desulfitobacterium hafniense Y51] gi|219668679|ref|YP_002459114.1| hypothetical protein Dhaf_2652 [Desulfitobacterium hafniense DCB-2] gi|89333714|dbj|BAE83309.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219538939|gb|ACL20678.1| protein of unknown function DUF88 [Desulfitobacterium hafniense DCB-2] Length = 253 Score = 102 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 28/172 (16%), Positives = 51/172 (29%), Gaps = 29/172 (16%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 D + IA+ ID N+ + + +L + I Y + Sbjct: 1 MDNDKNIAVLIDADNV--------SEKYIKPILDEVSNHGIPTYKRIYGDWTKPQLSSWK 52 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIF 119 ++++ G K++ D L +DA + S+ ++ I Sbjct: 53 ----------NVLLNYSITPIQQYSYTTG----KNATDAALIIDAMDILYSKNVDGFCIV 98 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 S D FT L A L+ V + + + F L L Sbjct: 99 SSDSDFTRLAARLREAGMYVIGMGEKKTPTP-----FIAACEKFKYLEVLAG 145 >gi|259486533|tpe|CBF84456.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4] Length = 262 Score = 102 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 25/172 (14%), Positives = 47/172 (27%), Gaps = 30/172 (17%) Query: 1 MFDPR-EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 M + + + +D N S+ L +L V Y + Sbjct: 1 MANNTTPNLVVLVDADNAMPSTARL--------ILAEVAKYGTVYVKRAYGDWTSTSLKG 52 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLV 117 + + ++F G K+S D + +DA + S Sbjct: 53 WKK----------ELLSQSIQPFQQFAYTNG----KNSTDSAMIIDAMDLLYSNRFGGFC 98 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 + S D FT L A ++ V + + + F+ L Sbjct: 99 LVSSDSDFTRLAARIRESGLTVYGFGEQKTPKPFVA-----ACNKFIYTENL 145 >gi|5441510|emb|CAB46751.1| hypothetical protein [Synechococcus elongatus] Length = 142 Score = 102 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 36/134 (26%), Positives = 67/134 (50%), Gaps = 10/134 (7%) Query: 43 VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVE 101 ++ A++YT + + D L G+ V K+ KE+ + G+ K+++D+E Sbjct: 11 LVNAFWYTGL-----KDMQDQRSFRDALINLGYTVRTKLLKEYYDESLGKYYQKANLDIE 65 Query: 102 LAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 + +D F + +V+FSGDG F + L+ K +T+VST M + +LR D Sbjct: 66 IVIDMFNTVGQYDRVVLFSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATD 121 Query: 162 YFMDLAYLKNEIAR 175 ++DL ++ I + Sbjct: 122 RYIDLNEIRPFIEK 135 >gi|88703638|ref|ZP_01101354.1| conserved hypothetical protein (DUF88) [Congregibacter litoralis KT71] gi|88702352|gb|EAQ99455.1| conserved hypothetical protein (DUF88) [Congregibacter litoralis KT71] Length = 241 Score = 102 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 24/176 (13%), Positives = 51/176 (28%), Gaps = 30/176 (17%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M + ++IAL ID N+ ++ +L+ V + + + Sbjct: 1 MSE-TKRIALLIDCDNVTPNA--------IAGVLEELAKHGTVNVRHAHGDWNNPSLSGW 51 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118 + ++F G K++ D + +DA + S ++ + Sbjct: 52 ----------AEKLHPHAIRPMQQFAYTKG----KNATDSAMIIDAMDLLYSGNVDAFAL 97 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 + D FT LV + V + F+ + L Sbjct: 98 MTSDSDFTPLVLRILESGFPVYGFGGKKTPSP-----FVDSCSPFIFIENLIPSKE 148 >gi|227539037|ref|ZP_03969086.1| protein of hypothetical function DUF88 [Sphingobacterium spiritivorum ATCC 33300] gi|227241093|gb|EEI91108.1| protein of hypothetical function DUF88 [Sphingobacterium spiritivorum ATCC 33300] Length = 259 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 60/186 (32%), Gaps = 31/186 (16%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M D + IA+ IDG N AS ++L+ Y + Sbjct: 1 MNDSKFNIAVLIDGDNAQASL--------IKELIAEVSKYGKATIRRIYGDWTSPQMNSW 52 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVI 118 + + ++F+ G K+S D L +DA + + ++ I Sbjct: 53 KDILN----------EYSINPIQKFSYTSG----KNSTDSSLIIDAMDILHGKSVDGFCI 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL--KNEIARD 176 S D +T L ++ + V + + + F L EIA Sbjct: 99 VSSDSDYTGLAKRIREEGLFVMGIG-----RKITPIAFVNSCEIFTFTENLVEVEEIAAV 153 Query: 177 PDEDKK 182 P ++KK Sbjct: 154 PADNKK 159 >gi|320353622|ref|YP_004194961.1| hypothetical protein Despr_1516 [Desulfobulbus propionicus DSM 2032] gi|320122124|gb|ADW17670.1| hypothetical protein Despr_1516 [Desulfobulbus propionicus DSM 2032] Length = 356 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 23/164 (14%), Positives = 44/164 (26%), Gaps = 29/164 (17%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +A+ ID N S L+ I Y + + Sbjct: 12 LAVLIDADNAQPSVTD--------ALMAEIAKYGIASVKRIYGDWTTPHLVGWKSIV--- 60 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCF 125 + + ++F G K++ D + +DA + + + S D F Sbjct: 61 -------LEYSIQPIQQFRYTTG----KNATDSAMIIDAMDLLYTRRFTGFCLVSSDSDF 109 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 T L + ++ + V D F+ L Sbjct: 110 TRLASRIREEGFPVYGFGERK-----TPQAFVSACDKFIYTEVL 148 >gi|316935522|ref|YP_004110504.1| hypothetical protein Rpdx1_4219 [Rhodopseudomonas palustris DX-1] gi|315603236|gb|ADU45771.1| hypothetical protein Rpdx1_4219 [Rhodopseudomonas palustris DX-1] Length = 266 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 26/166 (15%), Positives = 50/166 (30%), Gaps = 29/166 (17%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 ++A+ ID N AS+K L + Y + + Sbjct: 8 PRLAVLIDADN--ASAKIA------DGLFEEIAKIGEASVRRIYGDFSTQRSKGW----- 54 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDG 123 + ++F G K++ D+ L +DA + S + + S D Sbjct: 55 -----ADILAKHAIIPQQQFAYTTG----KNASDITLVIDAMDLLHSGRFDGFCLVSSDS 105 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 FT L + ++ + V + R+ F+ L Sbjct: 106 DFTRLASRIREQGVDVFGFGEQK-----TPESFRQACRRFVYTENL 146 >gi|90418798|ref|ZP_01226709.1| conserved hypothetical protein [Aurantimonas manganoxydans SI85-9A1] gi|90336878|gb|EAS50583.1| conserved hypothetical protein [Aurantimonas manganoxydans SI85-9A1] Length = 273 Score = 101 bits (252), Expect = 4e-20, Method: Composition-based stats. Identities = 31/188 (16%), Positives = 59/188 (31%), Gaps = 33/188 (17%) Query: 1 MFDPRE----KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP 56 M + R ++A+ ID N ASS+ L + Y Sbjct: 1 MSNTRPDRTARLAVLIDADN--ASSRIA------DGLFEEIAKIGEASVRRIYGDFSSSR 52 Query: 57 EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLE 114 + ++ + + ++F G K++ D+ L +DA + S + Sbjct: 53 SKGWADVLS----------RHAIIPQQQFAYTTG----KNASDITLVIDAMDLLHSGRFD 98 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 + S D FT L A ++ + V + R+ F+ L + Sbjct: 99 GFCLVSSDSDFTRLAARIREQGVDVYGFGEQK-----TPESFRQACRRFIYTENLLPQRI 153 Query: 175 RDPDEDKK 182 +D K Sbjct: 154 APEKDDGK 161 >gi|332184991|ref|ZP_08386740.1| hypothetical protein SUS17_244 [Sphingomonas sp. S17] gi|332014715|gb|EGI56771.1| hypothetical protein SUS17_244 [Sphingomonas sp. S17] Length = 258 Score = 101 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 31/183 (16%), Positives = 58/183 (31%), Gaps = 30/183 (16%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M IAL ID N +++ +L V Y + + Sbjct: 1 MNALTRNIALLIDADNAQSAA--------IDPVLTVLAELGTVNVRRAYGNWSKPGLKGW 52 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVI 118 V+ K E + + K++ D+++ +DA + ++ I Sbjct: 53 R--------------DVMVKHGIEPQQQFDLTKGKNATDMKMTIDAMDLLFRGRIDGFGI 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD-P 177 S D F L +++ V S + ++ F+D+ L NE R P Sbjct: 99 MSSDSDFMPLATRIRQDGFPVYGFG-----NSRTPEAFKQACSRFIDVGALINEAPRPMP 153 Query: 178 DED 180 + Sbjct: 154 SKP 156 >gi|158314589|ref|YP_001507097.1| hypothetical protein Franean1_2768 [Frankia sp. EAN1pec] gi|158109994|gb|ABW12191.1| protein of unknown function DUF88 [Frankia sp. EAN1pec] Length = 272 Score = 101 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 25/165 (15%), Positives = 45/165 (27%), Gaps = 29/165 (17%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 ++A+ ID N AS +L Y + + Sbjct: 10 RLAVLIDADNAQASL--------VEHVLAEVAMFGTAHVKRAYGDWTSTHLRSWKDQL-- 59 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124 + ++F G K++ D + +DA + L+ + S D Sbjct: 60 --------LAHSIQPIQQFAHTSG----KNATDAAMVIDAMDLLYGAELDGFCLISSDSD 107 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 FT L + L+ + V D F + L Sbjct: 108 FTRLASRLRESGRIVYGFGERK-----TPRSFVAACDTFTYVENL 147 >gi|116626906|ref|YP_829062.1| hypothetical protein Acid_7883 [Candidatus Solibacter usitatus Ellin6076] gi|116230068|gb|ABJ88777.1| protein of unknown function DUF88 [Candidatus Solibacter usitatus Ellin6076] Length = 451 Score = 101 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 38/178 (21%), Positives = 72/178 (40%), Gaps = 23/178 (12%) Query: 2 FDPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + KIA+FID N+ K+ L + D +L A + R ++ + Y + Sbjct: 1 MEQKLKIAVFIDFDNIEIGVKSTLHREFDVAAVLDALKERGEIVTKFAYAN--------W 52 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLV 117 L + Q+V + + K+ D+ LA+DA E + + + Sbjct: 53 GRQESATRALSEHAVQMVQRDPSPRGD-------KNGADINLALDALEMAFTHDHINAFA 105 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 I SGD F LV L++ K++ +V + S L++ F+ + ++ R Sbjct: 106 IVSGDSDFIALVNKLKQYDKRIFVV----GGRAFTSTILQKNCHEFVAYESVMDDKPR 159 >gi|312198295|ref|YP_004018356.1| hypothetical protein FraEuI1c_4493 [Frankia sp. EuI1c] gi|311229631|gb|ADP82486.1| hypothetical protein FraEuI1c_4493 [Frankia sp. EuI1c] Length = 314 Score = 101 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 23/167 (13%), Positives = 47/167 (28%), Gaps = 28/167 (16%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 ++A+ ID N ++ LL Y + + Sbjct: 9 RLAVLIDAENAPLAA--------VEPLLAQIGRFGRAQVKRAYGDWTVASLKSWKKTL-- 58 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGC 124 + + + F G K++ D+ L ++A + + + S D Sbjct: 59 --------LDLSIRPVQVFAAVRG----KNASDMALVIEAMDLLHSGAFDGFCLVSSDSD 106 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 FT L ++ V + L D F+ + L + Sbjct: 107 FTRLAERIREAGLTVYGFGE----ERKTNPGLVAACDTFIFVETLID 149 >gi|227329498|ref|ZP_03833522.1| hypothetical protein PcarcW_19989 [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 241 Score = 101 bits (251), Expect = 5e-20, Method: Composition-based stats. Identities = 35/183 (19%), Positives = 60/183 (32%), Gaps = 33/183 (18%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M D EKIA+FID N A ID K+L +V Y + + Sbjct: 1 MKDK-EKIAVFIDADN------APAKKID--KVLSELARYGVVNIRKAYGNWKNQNLKAW 51 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVI 118 + + ++F G K++ D+ LA+D + ++ ++ + + Sbjct: 52 ----------EDVLHEFAIQPIQQFDLTKG----KNATDMALAIDVMDVLYTKNVDVICL 97 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY---LKNEIAR 175 S D FT LV K V + F+ L ++ I + Sbjct: 98 VSSDCDFTPLVTRALADGKFVIGFGERKAP-----VAFVNSCSRFLYLDDEIGIEQPIQK 152 Query: 176 DPD 178 Sbjct: 153 QSR 155 >gi|192292848|ref|YP_001993453.1| hypothetical protein Rpal_4482 [Rhodopseudomonas palustris TIE-1] gi|192286597|gb|ACF02978.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1] Length = 267 Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats. Identities = 27/170 (15%), Positives = 50/170 (29%), Gaps = 29/170 (17%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 ++A+ ID N AS+K L + Y + + Sbjct: 4 EHRSPRLAVLIDADN--ASAKIA------DGLFEEIAKIGEASVRRIYGDFSTPRSKGW- 54 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIF 119 + ++F G K++ D+ L +DA + S E + Sbjct: 55 ---------ADILAKHAIIPQQQFAYTTG----KNASDITLVIDAMDLLHSGRFEGFCLV 101 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 S D FT L + ++ + V + R+ F+ L Sbjct: 102 SSDSDFTRLASRIREQGVDVFGFGEQK-----TPESFRQACRRFVYTENL 146 >gi|295109365|emb|CBL23318.1| Uncharacterized conserved protein [Ruminococcus obeum A2-162] Length = 255 Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 52/166 (31%), Gaps = 29/166 (17%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 + IA+ ID N S +++ + ++ Y + + Sbjct: 5 KNIAMLIDADNTQLS--------KLESVIQEISTNGRIVVKRAYGNWRKGSLKNW----- 51 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDG 123 ++ K ++F G K++ D+ L +D + + VI + D Sbjct: 52 -----ENELKRLAIKAEQQFDYVAG----KNATDMALVIDTLDLLHSGIYDAFVIVASDS 102 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 +T L L+ V V + R D F+ L L Sbjct: 103 DYTPLAIKLRESGVFVMGVGEKKTPEP-----FRNACDEFVYLENL 143 >gi|52425038|ref|YP_088175.1| hypothetical protein MS0983 [Mannheimia succiniciproducens MBEL55E] gi|52307090|gb|AAU37590.1| unknown [Mannheimia succiniciproducens MBEL55E] Length = 274 Score = 100 bits (250), Expect = 6e-20, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 51/168 (30%), Gaps = 30/168 (17%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +A+ ID N A + + +L+ Y VGD + Sbjct: 18 LAVLIDADNASAQT--------IKAILEETTKFGEATVKRIYGNFVGDSGK--------- 60 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCF 125 + K ++F G K++ D + +DA + + + I S D F Sbjct: 61 --WKAVINEYAIKPMQQFAYTKG----KNATDGFMIIDAMDLLYTNRFDGFCIVSSDSDF 114 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 T L L+ + V + F+ + L E+ Sbjct: 115 TALAIRLKEQGVTVYGFG-----KKQTPEAFLNACSQFIYVENLLPEL 157 >gi|39937021|ref|NP_949297.1| hypothetical protein RPA3960 [Rhodopseudomonas palustris CGA009] gi|39650878|emb|CAE29401.1| conserved unknown protein [Rhodopseudomonas palustris CGA009] Length = 267 Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats. Identities = 27/170 (15%), Positives = 50/170 (29%), Gaps = 29/170 (17%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 ++A+ ID N AS+K L + Y + + Sbjct: 4 EHRSPRLAVLIDADN--ASAKIA------DGLFEEIAKIGEASVRRIYGDFSTPRSKGW- 54 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIF 119 + ++F G K++ D+ L +DA + S E + Sbjct: 55 ---------ADILAKHAIIPQQQFAYTTG----KNASDITLVIDAMDLLHSGRFEGFCLV 101 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 S D FT L + ++ + V + R+ F+ L Sbjct: 102 SSDSDFTRLASRIREQGVDVFGFGEQK-----TPESFRQACRRFVYTENL 146 >gi|241554076|ref|YP_002979289.1| protein of unknown function DUF88 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240863382|gb|ACS61044.1| protein of unknown function DUF88 [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 262 Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 49/171 (28%), Gaps = 29/171 (16%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M + +AL IDG N AS K + LL + Y + Sbjct: 1 MTGTSDTLALLIDGDN--ASPKIVS------GLLAEIATYGTASVRRIYGDWTKPNLNGW 52 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118 + + ++F G K++ D + +DA + + I Sbjct: 53 K----------ECLLEHSIQPVQQFAYTTG----KNATDGAMIIDAMDLLYTGRFSAFCI 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 S D F L + ++ + V + D F+ L Sbjct: 99 VSSDSDFARLASRIREQGVTVYGFGERKTPRP-----FITACDKFVYFDVL 144 >gi|254507560|ref|ZP_05119693.1| protein containing DUF88 [Vibrio parahaemolyticus 16] gi|219549447|gb|EED26439.1| protein containing DUF88 [Vibrio parahaemolyticus 16] Length = 240 Score = 100 bits (250), Expect = 7e-20, Method: Composition-based stats. Identities = 31/177 (17%), Positives = 61/177 (34%), Gaps = 29/177 (16%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 KIA+ ID N S L +++ S +I Y + + + Sbjct: 3 NRKIAVLIDSENTPHSKLNL--------IIEELSSFGQIIVKRAYGDFSAEQLKNWKQPL 54 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122 ++ + ++F G K+S D + +DA + S+ + + S D Sbjct: 55 N----------ELAIQAKQQFAYTSG----KNSTDSLMIIDAMDLLYSQRFDAFALISSD 100 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 FT+L L+ V V +M + D F+ + L ++ + + Sbjct: 101 SDFTSLATRLRESEIHVIGVG-----KAMTPTSFKNACDDFVAIENLNADVDLEQAQ 152 >gi|329118512|ref|ZP_08247216.1| hypothetical protein HMPREF9123_0644 [Neisseria bacilliformis ATCC BAA-1200] gi|327465247|gb|EGF11528.1| hypothetical protein HMPREF9123_0644 [Neisseria bacilliformis ATCC BAA-1200] Length = 264 Score = 100 bits (250), Expect = 8e-20, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 59/175 (33%), Gaps = 30/175 (17%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 ++A+ ID N AS++ D +L Y VGD Q ++ Sbjct: 17 RLAVLIDADN--ASAR------DIAAILDEVTKFGDATVKRTYGNFVGDNGQWKQVINDY 68 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124 K ++F G K++ D + +DA + S+ L+ I S D Sbjct: 69 -----------AIKPMQQFAFTTG----KNATDGFMIIDAMDLLYSDRLDGFCIVSSDSD 113 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 FT L L+ + V F+ + L +E ++ ++ Sbjct: 114 FTALAIRLKEQGMPVYGFG-----RKQTPKAFINACTQFIYVENLISEEIKNDNK 163 >gi|307824274|ref|ZP_07654500.1| protein of unknown function DUF88 [Methylobacter tundripaludum SV96] gi|307734654|gb|EFO05505.1| protein of unknown function DUF88 [Methylobacter tundripaludum SV96] Length = 276 Score = 100 bits (249), Expect = 8e-20, Method: Composition-based stats. Identities = 29/182 (15%), Positives = 56/182 (30%), Gaps = 30/182 (16%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 + ++ AL ID N A + +L V Y + Sbjct: 4 NENKRFALLIDADNAQAKA--------IDAILTEAARYGDVTSRRCYGDWTHTRLGSWKS 55 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120 + + + ++F G K++ D L +DA + + + S Sbjct: 56 VLN----------KHAIQPMQQFAYTSG----KNATDSALIIDAMDLLYTGKFNGFFLVS 101 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 D FT L L+ +V + + + R + F+ + ++ DE Sbjct: 102 SDSDFTKLATRLREAGLEVIGIG-----KRLTPEAFRAACNKFIFTETIMDD-ENSADEI 155 Query: 181 KK 182 KK Sbjct: 156 KK 157 >gi|317145182|ref|XP_001820499.2| hypothetical protein AOR_1_2934154 [Aspergillus oryzae RIB40] Length = 258 Score = 100 bits (249), Expect = 9e-20, Method: Composition-based stats. Identities = 26/166 (15%), Positives = 47/166 (28%), Gaps = 29/166 (17%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 K+ + ID N +S +D LL Y Q + Sbjct: 7 PKLVVLIDADNARSSV------VDP--LLSEIAKYGTAHAKRAYGDWTRTNLQGWKDQL- 57 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDG 123 + + ++F G K++ D + +DA + S + + S D Sbjct: 58 ---------LKQSIQPIQQFAYTHG----KNATDSAMIIDAMDLLYSSRYDGFCLVSSDS 104 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 FT L A ++ V + + F+ L Sbjct: 105 DFTRLAARIRESGLIVYGFGENHTPKPFVA-----ACSKFIYTENL 145 >gi|238917756|ref|YP_002931273.1| hypothetical protein EUBELI_01837 [Eubacterium eligens ATCC 27750] gi|238873116|gb|ACR72826.1| Hypothetical protein EUBELI_01837 [Eubacterium eligens ATCC 27750] Length = 318 Score = 100 bits (249), Expect = 9e-20, Method: Composition-based stats. Identities = 30/170 (17%), Positives = 57/170 (33%), Gaps = 29/170 (17%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 ++ A+ ID N+ SSK +L ++ Y ++ Sbjct: 3 DKRYAVLIDSDNI--SSKY------ISNILDEMTKYGVITYKRIYGDWTSPQAGKWKKEL 54 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGD 122 + ++F G K++ D L +DA + ++ ++ I S D Sbjct: 55 M----------ENSITPIQQFRNTVG----KNATDSTLIIDAMDILYTKNVDGFCIVSSD 100 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 G FT L + L+ +V + R F DL L+++ Sbjct: 101 GDFTRLASRLRESGMEVIGMGENK-----TPRSFRAACSVFTDLELLQDQ 145 >gi|229825159|ref|ZP_04451228.1| hypothetical protein GCWU000182_00510 [Abiotrophia defectiva ATCC 49176] gi|229790531|gb|EEP26645.1| hypothetical protein GCWU000182_00510 [Abiotrophia defectiva ATCC 49176] Length = 249 Score = 100 bits (249), Expect = 9e-20, Method: Composition-based stats. Identities = 26/170 (15%), Positives = 50/170 (29%), Gaps = 29/170 (17%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + ++I + ID N ++ + ++ Y D + + Sbjct: 1 MENLKRIVMLIDADNTQIG--------KLEDVIGEISTHGRIVVKRAYGNWRKDVLKNW- 51 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIF 119 ++ K ++F G K++ D+ L +D + VI Sbjct: 52 ---------EKELKRLAIKAEQQFDYVNG----KNATDMALVIDTMNLLHKGIYDCFVIV 98 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 + D +T L L V V + R D F+ L L Sbjct: 99 ASDSDYTPLAINLHESGVYVIGVGEKK-----TPEAFRNSCDEFIFLENL 143 >gi|225175633|ref|ZP_03729627.1| conserved hypothetical protein [Dethiobacter alkaliphilus AHT 1] gi|225168962|gb|EEG77762.1| conserved hypothetical protein [Dethiobacter alkaliphilus AHT 1] Length = 246 Score = 100 bits (249), Expect = 9e-20, Method: Composition-based stats. Identities = 30/171 (17%), Positives = 51/171 (29%), Gaps = 29/171 (16%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + KIA+ ID N+ S K + + D + Y + Sbjct: 1 MENDRKIAVLIDADNV--SEKYIKYIFD------EISNHGTPTYKRIYGDWTKPQLTPWK 52 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIF 119 ++++ G K++ D L +DA + SE ++ I Sbjct: 53 ----------NVLLNYSITPIQQYSYTTG----KNATDAALIIDAMDILYSENVDGFCIV 98 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 S D FT L A L+ V + + + F L L Sbjct: 99 SSDSDFTKLAARLREAGMYVIGMGEKKTPTP-----FIAACEKFKYLEVLA 144 >gi|320162088|ref|YP_004175313.1| hypothetical protein ANT_26870 [Anaerolinea thermophila UNI-1] gi|319995942|dbj|BAJ64713.1| hypothetical protein ANT_26870 [Anaerolinea thermophila UNI-1] Length = 271 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 29/178 (16%), Positives = 53/178 (29%), Gaps = 29/178 (16%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 +IA+ IDG N S +L VI Y + + Sbjct: 12 RIAMLIDGDNAQPSL--------IGDMLAETSKYGTVIIRRIYGDWTTANMNGWKEVLQ- 62 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDGC 124 + ++F G K++ D + +DA + + +E + S D Sbjct: 63 ---------TYAIQPIQQFRYTIG----KNATDSAMIIDAMDILYEDRVEGFCLVSSDSD 109 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182 +T L ++ K V + S D F+ L+ + P + Sbjct: 110 YTRLATRIREKGIFVMGIG-----KSTTPRAFVNACDVFVFTENLQKKNLPAPKPRPQ 162 >gi|225568810|ref|ZP_03777835.1| hypothetical protein CLOHYLEM_04889 [Clostridium hylemonae DSM 15053] gi|225162309|gb|EEG74928.1| hypothetical protein CLOHYLEM_04889 [Clostridium hylemonae DSM 15053] Length = 313 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 54/166 (32%), Gaps = 29/166 (17%) Query: 9 ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68 AL ID N+ S+K + +L + Y ++ Sbjct: 7 ALLIDADNI--SAKY------IKPILTELSKYGNITYKRIYGDWTSTQHSKWK------- 51 Query: 69 WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDGCFT 126 ++F+ G K++ D + +DA + + + I S D FT Sbjct: 52 ---DELLTNSITPIQQFSYTQG----KNATDSAMIIDAMDILYTNDVHGFCIVSSDSDFT 104 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 LV+ L+ K V + + R+ D F L L NE Sbjct: 105 RLVSRLRESGKLVIGMGENKTPEP-----FRKACDKFTILENLLNE 145 >gi|110833552|ref|YP_692411.1| hypothetical protein ABO_0691 [Alcanivorax borkumensis SK2] gi|110646663|emb|CAL16139.1| conserved hypothetical protein [Alcanivorax borkumensis SK2] Length = 252 Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats. Identities = 28/178 (15%), Positives = 55/178 (30%), Gaps = 31/178 (17%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +A+ ID N +D L + Y + Sbjct: 18 LAVLIDADN------TPPKIVD--GLFEEIAKFGTASVKRIYGDWTKPNLGGWKS----- 64 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCF 125 V+ K + + + + K++ D + +DA + S+ L + S D F Sbjct: 65 ---------VLLKHSIQPIQQFAYTQGKNATDCSMIIDAMDLLYSKQLSGFCLVSSDSDF 115 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE--IARDPDEDK 181 T L A L+ + V + + D F+ L+++ PD+ + Sbjct: 116 TRLAARLREEGLTVYGFGERKTPGPFVA-----ACDKFIYTEVLRSDHAPQHTPDKPQ 168 >gi|269925423|ref|YP_003322046.1| protein of unknown function DUF88 [Thermobaculum terrenum ATCC BAA-798] gi|269789083|gb|ACZ41224.1| protein of unknown function DUF88 [Thermobaculum terrenum ATCC BAA-798] Length = 408 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 44/184 (23%), Positives = 75/184 (40%), Gaps = 21/184 (11%) Query: 8 IALFIDGANLYASSKALGFDI-DYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 +AL+ID N+ S + + L +A V+ A Y Q Sbjct: 20 VALYIDWENIKYSLWNKDSRVPNATALKEAASKFGRVVVARAYANW------QEHQHQLD 73 Query: 67 LDWLHYNGFQVVAKVAKEFTENCG---RKRVKSSMDVELAVDAFEQS---EGLEHLVIFS 120 + L+ G + + + +T R K+S+DV+L VDA + + V+ + Sbjct: 74 PNDLYSAGIEPIYVPTRTYTSTDAVKTNNRRKNSVDVKLTVDAVDFCLSNPNIHTFVLVT 133 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY----LKNEIARD 176 GDG F LV AL+ + ++V ++ S QL ADYF+ + +++ D Sbjct: 134 GDGDFIHLVNALRSRGREVVVIGCS----WSTSWQLTSMADYFIPYDIEVDPIYDKVGED 189 Query: 177 PDED 180 ED Sbjct: 190 NTED 193 >gi|329847705|ref|ZP_08262733.1| hypothetical protein ABI_07730 [Asticcacaulis biprosthecum C19] gi|328842768|gb|EGF92337.1| hypothetical protein ABI_07730 [Asticcacaulis biprosthecum C19] Length = 145 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 52/162 (32%), Gaps = 31/162 (19%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 K+AL +DG N+ L K + + Y P+ Sbjct: 4 KLALLVDGDNIGHQL--------IAPLWKQVVTLGMPNVQRVYRDWSRGPD--------- 46 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGC 124 + + +F G K++ D+ + +DA + ++ + + S D Sbjct: 47 ---WKDVLLKYALQPMHQFNYAPG----KNATDIAMVIDALDLAQTGLYDGFCLASSDSD 99 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 FT L L+++ KV ++ D F+ L Sbjct: 100 FTPLAIRLRQRGLKVYGFGETK-----TPATFQQACDRFIIL 136 >gi|84515798|ref|ZP_01003159.1| hypothetical protein SKA53_14151 [Loktanella vestfoldensis SKA53] gi|84510240|gb|EAQ06696.1| hypothetical protein SKA53_14151 [Loktanella vestfoldensis SKA53] Length = 246 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 31/179 (17%), Positives = 56/179 (31%), Gaps = 29/179 (16%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M R +A+ ID N+ +K G +L+ + Y + Sbjct: 1 MAKDRMLLAVLIDADNIP--AKYAG------PILREVTTYGEPALRRVYGDWSSPALGGW 52 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVI 118 V + + R K++ D+ L +DA + S + V+ Sbjct: 53 KKE--------------VVDLGLVANQETANTRGKNASDIGLVIDAMDILHSGRFDGFVL 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 S D FT L L+ V + + LR + F+ + L ++ P Sbjct: 99 VSSDSDFTALANRLRENGVVVIGIGEGKAP-----VSLRNVCNRFILIENLVDQEKEQP 152 >gi|219848822|ref|YP_002463255.1| hypothetical protein Cagg_1924 [Chloroflexus aggregans DSM 9485] gi|219543081|gb|ACL24819.1| protein of unknown function DUF88 [Chloroflexus aggregans DSM 9485] Length = 334 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 59/164 (35%), Gaps = 29/164 (17%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 +IAL IDG N A+ ++++ + I++ Y S Sbjct: 24 RIALLIDGENCAATYAD--------QVMEMADKQGILVTRRVYANWSV------SAHQKW 69 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGC 124 ++ + + + G KS++D+ L +DA + + + +GDG Sbjct: 70 IEAVARYDLRPI--------YYAGIAPGKSTIDMVLTIDAMDLHYRQVCDDFCLVTGDGD 121 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 + LV L+ V ++ T + L+ F+ LA Sbjct: 122 YAPLVKRLRAGGANVIVIGTEQ-----TATVLKEVCSTFIPLAK 160 >gi|89052539|ref|YP_507990.1| hypothetical protein Jann_0048 [Jannaschia sp. CCS1] gi|88862088|gb|ABD52965.1| protein of unknown function DUF88 [Jannaschia sp. CCS1] Length = 239 Score = 100 bits (248), Expect = 1e-19, Method: Composition-based stats. Identities = 23/177 (12%), Positives = 53/177 (29%), Gaps = 29/177 (16%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M + +A+ ID N + + + Y + + Sbjct: 1 MANDTPLLAVLIDADNTSH--------KHAQAIFEEIARFGEASVRRIYGDFSSTHMKGW 52 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVI 118 S + + + G K++ D+ L +DA + S + V+ Sbjct: 53 SGVQA----------EYGIVPFHQPANTVG----KNASDIALVIDAMDVLHSGRFDGFVL 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 S D FT L + ++ + V + + R+ F+ + + + + Sbjct: 99 VSSDSDFTRLASRIREQGLDVYGIGQQK-----TPEAFRKACKRFIFIENILPDQPK 150 >gi|169611408|ref|XP_001799122.1| hypothetical protein SNOG_08816 [Phaeosphaeria nodorum SN15] gi|111062864|gb|EAT83984.1| hypothetical protein SNOG_08816 [Phaeosphaeria nodorum SN15] Length = 277 Score = 99.7 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 24/177 (13%), Positives = 44/177 (24%), Gaps = 29/177 (16%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +AL ID N+ A L+ + Y + Sbjct: 7 LALLIDADNVSAKI--------IVGLMAEIANYGTASVRRIYGDWTSPALGPWKA----- 53 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCF 125 ++F G K++ D + +DA + + I S D F Sbjct: 54 -----CLLNHSITPIQQFAYTSG----KNATDGAMIIDAMDLLYTGRYTAFCIVSSDSDF 104 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182 T L + ++ + V + F L D++ Sbjct: 105 TRLASRIREQAVTVYGFGERK-----TPHAFVAACNKFTYFDVLNMTFEEPATADRQ 156 >gi|311747812|ref|ZP_07721597.1| hypothetical protein ALPR1_15829 [Algoriphagus sp. PR1] gi|126575803|gb|EAZ80113.1| hypothetical protein ALPR1_15829 [Algoriphagus sp. PR1] Length = 256 Score = 99.7 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 32/184 (17%), Positives = 61/184 (33%), Gaps = 29/184 (15%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M D + IA+ IDG N AS+K +++L+ Y + Sbjct: 1 MRDNKFNIAVLIDGDN--ASAKL------IKEILEEVSKYGKATIRRIYGDWTTPQMNSW 52 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVI 118 + L + ++F+ G K+S D L +DA + S ++ I Sbjct: 53 KEMINLHSFS----------PIQKFSYTTG----KNSTDSSLIIDAMDILHSSSVDGFCI 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 S D +T L ++ + V + + + + F L + + Sbjct: 99 VSSDSDYTGLAKRIREEGMFVMGIG-----RRITPKAFVQSCEIFTFAENLGPDTDEEKS 153 Query: 179 EDKK 182 + K Sbjct: 154 TETK 157 >gi|257453692|ref|ZP_05618979.1| protein containing DUF88 [Enhydrobacter aerosaccus SK60] gi|257448926|gb|EEV23882.1| protein containing DUF88 [Enhydrobacter aerosaccus SK60] Length = 267 Score = 99.7 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 29/167 (17%), Positives = 51/167 (30%), Gaps = 29/167 (17%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 ++A+ ID N AS L LL + I Y + Sbjct: 14 RLAVLIDADN--ASVNHL------DALLSEIATLGISSVRRAYGDWTRPQLNSWK----- 60 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124 + ++F+ G K++ D L +DA + +E + + S D Sbjct: 61 -----NVLLSYSIQPIQQFSYTTG----KNATDASLIIDAMDLLYTERFDGFCLVSSDSD 111 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 FT L ++ + V S + D F L + + Sbjct: 112 FTRLAQRIREQGLLVYGFG-----RSTTPKPFVQACDRFTYLEFFEE 153 >gi|254413548|ref|ZP_05027318.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC 7420] gi|196179655|gb|EDX74649.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC 7420] Length = 399 Score = 99.7 bits (247), Expect = 1e-19, Method: Composition-based stats. Identities = 38/166 (22%), Positives = 62/166 (37%), Gaps = 25/166 (15%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 EK+A+F+D NL K G LL+ V+ Y P Sbjct: 3 EKVAIFLDVENLSGWLKVDGG----EALLERANELGRVVVRRAYGDFSIASVSVRQPELN 58 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGL---EHLVIFSGD 122 LL GF+ F + K+S D+++ VD E + E +V+ +GD Sbjct: 59 LL------GFE--------FVHVYHPVKGKNSADIQIVVDVMEYLARIPDLEWVVLATGD 104 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F+ L L+ K V V S S+ +++ + F+ + Sbjct: 105 SDFSPLFRRLRELGKSVVGV----GPRSALSEAVKKSCNRFIYIDE 146 >gi|330984094|gb|EGH82197.1| hypothetical protein PLA107_03594 [Pseudomonas syringae pv. lachrymans str. M301315] Length = 282 Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 46/162 (28%), Positives = 80/162 (49%), Gaps = 14/162 (8%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA-IVIRAYYYT----TVVGDPEQQ 59 E++ ++ID AN+ A+ GF++DY L + + Y+ Sbjct: 3 MERVGVYIDQANVNANQ---GFEMDYSVLREFALRGGARGVHLNVYSSTNPAKAERDPAW 59 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119 S L + G+ + K AKE+ E R VK++ DV++AVD E + L+ +++ Sbjct: 60 HSRLKAYQSQIRSMGYHINLKEAKEYGEG-DRLVVKANADVDIAVDVLESASKLDRILLV 118 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 SGDG F++LVAA +R+ +V +++ S+QLR +D Sbjct: 119 SGDGDFSSLVAAARRQGARVEVLAFD-----HCSEQLRGASD 155 >gi|212637199|ref|YP_002313724.1| hypothetical protein swp_4494 [Shewanella piezotolerans WP3] gi|212558683|gb|ACJ31137.1| Conserved hypothetical protein [Shewanella piezotolerans WP3] Length = 245 Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 61/184 (33%), Gaps = 30/184 (16%) Query: 1 MFDP-REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 M +EKIALFID N A+ +D +L +V Y + Sbjct: 1 MLMKDKEKIALFIDADNAPAA------KVD--VILSELAKYGVVNIRRAYGNWKSSNIKP 52 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLV 117 + + + ++F G K++ D+ L +DA + ++ ++ + Sbjct: 53 W----------EDVLHEYAIQPIQQFDLTKG----KNATDIALVIDAMDILYTKDVDIIC 98 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 + S D FT LV K + + F+ L + + P Sbjct: 99 LVSSDCDFTPLVTRALADGKFLIGFGERKAP-----SAFVNSCSRFLYLDEYEQSVEGLP 153 Query: 178 DEDK 181 DK Sbjct: 154 KFDK 157 >gi|259419136|ref|ZP_05743053.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B] gi|259345358|gb|EEW57212.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B] Length = 258 Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 57/177 (32%), Gaps = 30/177 (16%) Query: 1 MFDPRE--KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58 M + + +A+ ID N+ S+K + S Y G Q Sbjct: 1 MANSEKPPLLAVLIDADNI--SAKHAEVMF------EEIASLGEASIRRIYGDFSGGGPQ 52 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHL 116 +S ++F G K++ D+ L +DA + S + Sbjct: 53 GWSKDKLAAYA---------IVPHQQFANTTG----KNASDIALVIDAMDILHSGRFDGF 99 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 V+ S D FT L + ++ + V + R F+ + L NE+ Sbjct: 100 VLISSDSDFTRLASRIREQGLDVYGMGMRK-----TPAAFVRACKRFIYVENLLNEV 151 >gi|149915348|ref|ZP_01903875.1| predicted S-transferase [Roseobacter sp. AzwK-3b] gi|149810637|gb|EDM70478.1| predicted S-transferase [Roseobacter sp. AzwK-3b] Length = 232 Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 28/182 (15%), Positives = 57/182 (31%), Gaps = 29/182 (15%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M D +A+ ID N + + R + + + Y + Sbjct: 1 MPDRTPLLAVLIDADNT-----SPKWT---RAIFEEIAAIGEASVRRCYGDFSSQQMSGW 52 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVI 118 + + + + G K++ D+ L +DA + + V+ Sbjct: 53 NKVQA----------EFGLVPHHQPANTVG----KNASDIALVIDAMDLMHSGRFDGFVL 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 S D FT L + ++ + +V + + R+ F+ L L E A P Sbjct: 99 VSSDSDFTRLASRIREQGLEVYGIGARK-----TPEAFRKACKRFIYLENLGTEGAETPA 153 Query: 179 ED 180 + Sbjct: 154 PN 155 >gi|92115812|ref|YP_575541.1| hypothetical protein Nham_0180 [Nitrobacter hamburgensis X14] gi|91798706|gb|ABE61081.1| protein of unknown function DUF88 [Nitrobacter hamburgensis X14] Length = 254 Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 34/174 (19%), Positives = 57/174 (32%), Gaps = 29/174 (16%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 + A+ ID N+ SSK L K Y + G + ++ Sbjct: 10 PRFAILIDAENV--SSKFA------DGLFKKIAQMGDAPVRLIYGNLSGPNLKGWAS--- 58 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGDG 123 V+ + E + + K+S D+ L +DA + + + S D Sbjct: 59 -----------VLPDHSLERRDQIRAAKGKNSADMALVIDAMDLLHDGRINGFCLVSSDS 107 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 FT L A L+R+ V D +R D F+ L L + + Sbjct: 108 DFTNLAARLRREGASVYGFGEKK-----TPDCFQRACDRFISLEGLLPKTSEPK 156 >gi|189210104|ref|XP_001941384.1| conserved hypothetical protein [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187977477|gb|EDU44103.1| conserved hypothetical protein [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 260 Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 28/183 (15%), Positives = 48/183 (26%), Gaps = 29/183 (15%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M +AL IDG N+ L+ + Y + Sbjct: 1 MPINDSSLALLIDGDNVSPKI--------IAGLMAEVANYGTASVRRIYGDWTSPYLNGW 52 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118 ++F G K+ D + +DA + + L + Sbjct: 53 KA----------CLLHHSITPIQQFAYTTG----KNVTDGAMIIDAMDLLYTGRLSSFCL 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 S D FT L A ++ + V ++ D FM L E + Sbjct: 99 VSSDSDFTRLAARIREQGVTVYGFGERK-----TNNAFIAACDKFMYFDVLSVESQELEE 153 Query: 179 EDK 181 + Sbjct: 154 PSR 156 >gi|329888562|ref|ZP_08267160.1| hypothetical protein BDIM_04870 [Brevundimonas diminuta ATCC 11568] gi|328847118|gb|EGF96680.1| hypothetical protein BDIM_04870 [Brevundimonas diminuta ATCC 11568] Length = 246 Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 55/169 (32%), Gaps = 29/169 (17%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 ++A+ IDG N AS++ L + Y + + Sbjct: 13 PRLAVLIDGEN--ASARIA------EALFTEIATLGEASARRIYGDAASPALRGW----- 59 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDG 123 V+ + A ++ +N + K+S D+ L +DA + S + + S D Sbjct: 60 ---------IDVLPRWAIQWQQNFQNTKGKNSGDIALVIDAMDLLHSGRFDGFCLVSSDS 110 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 FT L A ++ + V + R+ F+ L Sbjct: 111 DFTRLAARIREQGVPVYGFGERK-----TPESFRQACTRFIYTENLTGR 154 >gi|237808074|ref|YP_002892514.1| hypothetical protein Tola_1311 [Tolumonas auensis DSM 9187] gi|237500335|gb|ACQ92928.1| protein of unknown function DUF88 [Tolumonas auensis DSM 9187] Length = 239 Score = 99.3 bits (246), Expect = 2e-19, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 59/185 (31%), Gaps = 32/185 (17%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 EKIALFID N A+ ID +L +V Y + + Sbjct: 1 MQSNEKIALFIDADNAPAA------RIDM--VLSELARYGVVNIRKAYGNWKNPTLKSW- 51 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIF 119 + + ++F G K++ D+ L +D + ++ ++ + + Sbjct: 52 ---------EDVLHEYAIQPIQQFDLTKG----KNATDMALVIDVMDVLYTKKVDIICLV 98 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE---IARD 176 S D FT LV K V + F+ L + +A+ Sbjct: 99 SSDCDFTPLVTRTLSDGKFVIGFGERKAP-----VAFVNSCSRFLFLDQQVEQNITVAKP 153 Query: 177 PDEDK 181 P K Sbjct: 154 PRSIK 158 >gi|27378275|ref|NP_769804.1| hypothetical protein blr3164 [Bradyrhizobium japonicum USDA 110] gi|27351422|dbj|BAC48429.1| blr3164 [Bradyrhizobium japonicum USDA 110] Length = 265 Score = 98.9 bits (245), Expect = 2e-19, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 52/166 (31%), Gaps = 29/166 (17%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 ++A+ ID N AS+K L + Y + ++ + Sbjct: 8 PRLAVLIDADN--ASAKIA------DGLFEEIAKIGEASVRRIYGDFSSSRSKGWADILS 59 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDG 123 + ++F G K++ D+ L +DA + S + + S D Sbjct: 60 ----------KHAIIPQQQFAYTTG----KNASDITLVIDAMDLLHSGRFDGFCLVSSDS 105 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 FT L A ++ + V + R+ F+ L Sbjct: 106 DFTRLAARIREQGVDVFGFGEQK-----TPESFRQACRRFVYTENL 146 >gi|94496412|ref|ZP_01302989.1| hypothetical protein SKA58_09476 [Sphingomonas sp. SKA58] gi|94424158|gb|EAT09182.1| hypothetical protein SKA58_09476 [Sphingomonas sp. SKA58] Length = 257 Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 30/180 (16%), Positives = 59/180 (32%), Gaps = 30/180 (16%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 R IAL ID N A+ + ++ V Y + + Sbjct: 8 RGNIALLIDSDNASAA--------HFDSVMTVLAELGTVNIRRAYGNWSKTTLKAW---- 55 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122 + ++F G K++ D+++ +DA + S ++ + S D Sbjct: 56 ------AALSITQAIEPQQQFDLTKG----KNATDMKMTIDAMDLLASGRVDGFGLMSSD 105 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182 FT LV +++ V + + RR F+D+A L+ + + Sbjct: 106 SDFTPLVTRIRQDGIPVYGFG-----NANTPEGFRRACTRFIDVAALEPA-EVPASKPAR 159 >gi|258546012|ref|ZP_05706246.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826] gi|258518741|gb|EEV87600.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826] Length = 265 Score = 98.9 bits (245), Expect = 3e-19, Method: Composition-based stats. Identities = 27/174 (15%), Positives = 54/174 (31%), Gaps = 30/174 (17%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + ++A+ ID N + + +L+ Y V + Sbjct: 11 IEEKAARLAVLIDADNASSQT--------INAILEETTKFGDATVKRIYGNFVSGGGKWK 62 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118 S ++ K ++F G K++ D + +DA + +E E + Sbjct: 63 SVINEF-----------AIKPMQQFAYTKG----KNATDGFMIIDAMDLLYTERFEGFCL 107 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 S D FT L L+ + V + R F+ + L + Sbjct: 108 VSSDSDFTALAIRLKEQGVMVYGFG-----KKQTPEAFRNACSQFIYVENLMPK 156 >gi|239623453|ref|ZP_04666484.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239521484|gb|EEQ61350.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 308 Score = 98.6 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 59/171 (34%), Gaps = 29/171 (16%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M + A+ ID N+ S K + + +L + I Y + ++ + Sbjct: 1 MEQSERRFAVLIDADNV--SPKYIKY------ILDEVSDQGIATYKRIYGDWTDNEKRSW 52 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVI 118 + LLDW ++++ G K++ D + +DA + S ++ + Sbjct: 53 KNV--LLDWSVN--------PIQQYSYTTG----KNATDSAMIIDAMDILYSGNVDGFCL 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 S D FT L L+ V + + R D F L + Sbjct: 99 VSSDSDFTKLAQRLREAGMFVMGIGEQKTPKP-----FRAACDTFKLLEII 144 >gi|261415964|ref|YP_003249647.1| protein of unknown function DUF88 [Fibrobacter succinogenes subsp. succinogenes S85] gi|261372420|gb|ACX75165.1| protein of unknown function DUF88 [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326593|gb|ADL25794.1| conserved domain protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 384 Score = 98.6 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 36/160 (22%), Positives = 62/160 (38%), Gaps = 24/160 (15%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 IA+FID NL K G L+ ++ Y L PL Sbjct: 4 IAIFIDAENLTNWVKNNGVQ----SLMDELLPLGQIVVRKAYGKWSTP------QLIPLQ 53 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCF 125 L+ NGF++V K+S D+++ VD E + ++ +V+ +GD F Sbjct: 54 SALNENGFELV--------HTFHPVSGKNSTDIKMTVDTMEVALDSQVQWIVLATGDSDF 105 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165 + L L+ + K+V V S S+ ++ ++ Sbjct: 106 SPLFRKLREQGKEVIGV----GPKSPLSECVKNSCSRYIY 141 >gi|83949890|ref|ZP_00958623.1| hypothetical protein ISM_02310 [Roseovarius nubinhibens ISM] gi|83837789|gb|EAP77085.1| hypothetical protein ISM_02310 [Roseovarius nubinhibens ISM] Length = 231 Score = 98.6 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 29/182 (15%), Positives = 51/182 (28%), Gaps = 29/182 (15%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M + +A+ ID N S K D S Y + Sbjct: 1 MPEQTPLLAVLIDADN--TSPKWTQAIFD------EIASIGEASVRRCYGDFSSQQMNGW 52 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVI 118 + + G A K++ D+ L +DA + + V+ Sbjct: 53 NRVQ------AEFGLVPHHSPA--------NTVGKNASDIALVIDAMDLMHTGRFDGFVL 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 S D FT L + L+ + +V + + R+ F+ L L + Sbjct: 99 VSSDSDFTRLASRLREQGLEVFGIGARK-----TPEAFRKACKRFIYLENLGGAPETESR 153 Query: 179 ED 180 Sbjct: 154 AP 155 >gi|160935678|ref|ZP_02083053.1| hypothetical protein CLOBOL_00568 [Clostridium bolteae ATCC BAA-613] gi|158441422|gb|EDP19132.1| hypothetical protein CLOBOL_00568 [Clostridium bolteae ATCC BAA-613] Length = 308 Score = 98.6 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 58/171 (33%), Gaps = 29/171 (16%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M + A+ ID N+ S K + + +L I Y + ++ + Sbjct: 1 MEQNERRFAVLIDADNV--SPKYIKY------ILDEVSDVGIATYKRIYGDWTDNEKRSW 52 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVI 118 + LLDW ++++ G K++ D + +DA + S ++ + Sbjct: 53 KNV--LLDWS--------VNPIQQYSYTTG----KNATDSAMIIDAMDILYSGNVDGFCL 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 S D FT L L+ V + + R D F L + Sbjct: 99 VSSDSDFTKLAQRLREAGMFVMGIGEQKTPKP-----FRAACDTFKLLEII 144 >gi|196234013|ref|ZP_03132849.1| protein of unknown function DUF88 [Chthoniobacter flavus Ellin428] gi|196221952|gb|EDY16486.1| protein of unknown function DUF88 [Chthoniobacter flavus Ellin428] Length = 180 Score = 98.6 bits (244), Expect = 3e-19, Method: Composition-based stats. Identities = 36/175 (20%), Positives = 77/175 (44%), Gaps = 13/175 (7%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVV---GDPEQQF 60 P+ ++ + +D +N+ +++K +D+ KL + ++ Y + + + + Sbjct: 10 PQRRVLILVDESNVTSAAKVTNRKLDWLKLRDHLVNGRELLEMVVYVGLPPAMPEWQAER 69 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGL--EHLVI 118 + + WL NGF VV+K K+++DV +A+D E S + + +++ Sbjct: 70 DKKNKFVFWLRSNGFLVVSKD----GSPADESHYKANVDVLMAIDGVELSTEMQPDVVIL 125 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 +GD F L L+R+ +V S + + L+ A+ +DL L Sbjct: 126 VTGDADFAELALRLRRRGIRVEAASVAHTLGA----GLKTSANGIIDLGPLLASF 176 >gi|67921188|ref|ZP_00514707.1| Protein of unknown function DUF88 [Crocosphaera watsonii WH 8501] gi|67857305|gb|EAM52545.1| Protein of unknown function DUF88 [Crocosphaera watsonii WH 8501] Length = 134 Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 8/120 (6%) Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 L W+ NG++V+AK + + K+++DVE+AVD + +I S Sbjct: 6 EKQQGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDLMALVGSYDTAIIVS 61 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG ++ + ++ +VS SM SD L AD ++DL +K +I + + Sbjct: 62 GDGDLAYAADSVSYRGARIEVVS----LRSMTSDSLINVADRYIDLDQIKEDIQKTRKPN 117 >gi|312898144|ref|ZP_07757535.1| conserved hypothetical protein [Megasphaera micronuciformis F0359] gi|310620641|gb|EFQ04210.1| conserved hypothetical protein [Megasphaera micronuciformis F0359] Length = 281 Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 30/180 (16%), Positives = 55/180 (30%), Gaps = 29/180 (16%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + K+A+ ID N+ ID +L + ++ Y + Sbjct: 1 MNQEMKLAVLIDAENI------SNKYID--VILSEANNLGNIVYKRIYGNWTTPQMASWK 52 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIF 119 + + ++++ K+S D L +D + L+ I Sbjct: 53 NIILDNA----------IQPIQQYSN----TIRKNSSDSALIIDTMDLLYQSDLDAYCIV 98 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 S D FT L + L+ K V + + F+ L L E +P E Sbjct: 99 SSDSDFTRLASRLRESQKYVLGMGESK-----TPRSFISACNKFLYLDVLFEEACEEPVE 153 >gi|89070045|ref|ZP_01157376.1| hypothetical protein OG2516_09755 [Oceanicola granulosus HTCC2516] gi|89044382|gb|EAR50520.1| hypothetical protein OG2516_09755 [Oceanicola granulosus HTCC2516] Length = 238 Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 33/185 (17%), Positives = 58/185 (31%), Gaps = 30/185 (16%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M D R +A+ ID N S + G + + S Y + Sbjct: 1 MPDDRPLLAVLIDADN--TSPRHAG------AIFEEIASLGEASVRRCYGDFSSQQMAGW 52 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVI 118 + V A+ + K+S D+ L +DA + + V+ Sbjct: 53 NR--------------VQAEHGIVPHHSPANTVGKNSSDISLVIDAMDLLHTGRFDGFVL 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI-ARDP 177 S D FT L + ++ + V + D R+ F+ L L + + P Sbjct: 99 ISSDSDFTRLASRIREQGLDVYGIGQKK-----TPDAFRKACKRFIFLENLGAQTDEKAP 153 Query: 178 DEDKK 182 + K Sbjct: 154 RGEAK 158 >gi|294011667|ref|YP_003545127.1| hypothetical protein SJA_C1-16810 [Sphingobium japonicum UT26S] gi|292674997|dbj|BAI96515.1| conserved hypothetical protein [Sphingobium japonicum UT26S] Length = 244 Score = 98.6 bits (244), Expect = 4e-19, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 54/189 (28%), Gaps = 39/189 (20%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 P IAL ID N+ A D +L V Y + ++ Sbjct: 6 PSGNIALLIDADNVSAD------HFDP--VLTVLAELGTVNIRRAYGNWSKPALKGWARQ 57 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSG 121 F + R K++ D+++ +DA + S + + S Sbjct: 58 AVTQAIETQQQFDL--------------TRGKNATDMKMTIDAMDLMASGRVTGFGLMSS 103 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA----------YLKN 171 D FT LV L+++ V T R F+D+ L Sbjct: 104 DSDFTPLVTRLRQEGLPVYGFGTDK-----TPQAFRSACTRFIDVGALTSARETPVELAE 158 Query: 172 EIARDPDED 180 P D Sbjct: 159 STEEPPSPD 167 >gi|325107780|ref|YP_004268848.1| hypothetical protein Plabr_1213 [Planctomyces brasiliensis DSM 5305] gi|324968048|gb|ADY58826.1| protein of unknown function DUF88 [Planctomyces brasiliensis DSM 5305] Length = 245 Score = 98.2 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 38/161 (23%), Positives = 58/161 (36%), Gaps = 24/161 (14%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 K A+ +D NL K G + LL + I Y D F L Sbjct: 6 KAAILLDAENLTHWIKYDG----PKTLLNELNADGSFIIRKAYARWTNDSLADFQESLTL 61 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124 L GF +V K+S D++L VDA + + + ++ V+ +GD Sbjct: 62 L------GFDLV--------HTFHPVSKKNSADIQLTVDAMQFAADKTVQTFVLATGDSD 107 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165 F+ L L+ K V V S S+ +R F+ Sbjct: 108 FSPLFRRLREMGKTVIGV----GKRSPLSESVRNSCSRFIY 144 >gi|127511410|ref|YP_001092607.1| hypothetical protein Shew_0476 [Shewanella loihica PV-4] gi|126636705|gb|ABO22348.1| protein of unknown function DUF88 [Shewanella loihica PV-4] Length = 265 Score = 98.2 bits (243), Expect = 4e-19, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 53/163 (32%), Gaps = 29/163 (17%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 KIA+FID N A D +L +V Y + + Sbjct: 6 KIAVFIDADN------APARKFD--VILAELAKHGVVSIRKAYGNWKSPGLKHW------ 51 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDGC 124 + + ++F G K++ D+ L +DA + ++ ++ + + S D Sbjct: 52 ----EDILHEYAIQPIQQFDLTKG----KNATDIALVIDAMDILYTKDIDIMCLISSDCD 103 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 FT LV + KKV + F+ L Sbjct: 104 FTPLVTRVLSDGKKVFGFGERKAP-----TAFVNSCSRFLYLD 141 >gi|307292778|ref|ZP_07572624.1| hypothetical protein SphchDRAFT_0251 [Sphingobium chlorophenolicum L-1] gi|306880844|gb|EFN12060.1| hypothetical protein SphchDRAFT_0251 [Sphingobium chlorophenolicum L-1] Length = 246 Score = 97.8 bits (242), Expect = 5e-19, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 52/168 (30%), Gaps = 29/168 (17%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 P IAL ID N+ A D +L V Y + ++ Sbjct: 6 PSGNIALLIDADNVSAD------HFDP--VLTVLAELGTVNIRRAYGNWSKPALKGWARQ 57 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSG 121 F + + K++ D+++ +DA + S + + S Sbjct: 58 AVTQAIETQQQFDL--------------TKGKNATDMKMTIDAMDLMASGRVTGFGLMSS 103 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 D FT LV ++++ V T R F+D+ L Sbjct: 104 DSDFTPLVTRIRQEGLPVYGFGTDK-----TPQAFRSACTRFIDVGAL 146 >gi|319959088|gb|ADV90708.1| LabA [Nostoc linckia EC108] Length = 127 Score = 97.8 bits (242), Expect = 6e-19, Method: Composition-based stats. Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 8/108 (7%) Query: 72 YNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAA 131 NG++V+AK + + K+++DVE+AVD + + V+ SGDG V + Sbjct: 1 RNGYRVIAKDLVQLPDGS----KKANLDVEIAVDMMALVDSYDTAVLVSGDGDLAYAVNS 56 Query: 132 LQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 + + +V +VS SM SD L +D ++DL +K +I + P + Sbjct: 57 VSYRGVRVEVVS----LRSMTSDSLINVSDRYIDLEAIKEDIQKTPRQ 100 >gi|326330720|ref|ZP_08197024.1| hypothetical protein NBCG_02155 [Nocardioidaceae bacterium Broad-1] gi|325951561|gb|EGD43597.1| hypothetical protein NBCG_02155 [Nocardioidaceae bacterium Broad-1] Length = 252 Score = 97.8 bits (242), Expect = 6e-19, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 52/181 (28%), Gaps = 30/181 (16%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M +P +IAL ID N A+ +L V Y + + Sbjct: 1 MTEPF-RIALLIDADNAPAA--------KIDAILNDLAEYGEVTIRRAYGNWTKPELKGW 51 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGL--EHLVI 118 + ++F K++ D+ LA+DA E + + Sbjct: 52 ----------IEELHDAAIRPMQQFD----LTAHKNASDMALAIDAVELLHAAIPDAFAL 97 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 S D FT LV L+ K + V + + F + L Sbjct: 98 VSSDSDFTPLVHYLREKGRAVYGYGREKTPAP-----FKSACTRFTVVEKLGGSEEETDA 152 Query: 179 E 179 + Sbjct: 153 D 153 >gi|163815163|ref|ZP_02206544.1| hypothetical protein COPEUT_01321 [Coprococcus eutactus ATCC 27759] gi|158449572|gb|EDP26567.1| hypothetical protein COPEUT_01321 [Coprococcus eutactus ATCC 27759] Length = 322 Score = 97.8 bits (242), Expect = 6e-19, Method: Composition-based stats. Identities = 27/177 (15%), Positives = 54/177 (30%), Gaps = 30/177 (16%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 K A+ ID N+ S+K + D + Y + Sbjct: 11 KYAILIDSENV--SAKYIESIFD------ELSRLGSITVRKIYGDWSKNNNG-------- 54 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124 W + ++F+ G K+S D + +DA + + ++ + + D Sbjct: 55 --WDKDCLLSYSIQPVQQFSYTAG----KNSTDSAMIIDAMDLLYTSNIDGFCLVTSDSD 108 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK-NEIARDPDED 180 FT L + L+ K+V + F L L ++ + + Sbjct: 109 FTRLASRLREAGKQVIGMGERK-----TPKAFVSACTSFKILDSLVNEDLNKPASKP 160 >gi|120612954|ref|YP_972632.1| hypothetical protein Aave_4318 [Acidovorax citrulli AAC00-1] gi|120591418|gb|ABM34858.1| protein of unknown function DUF88 [Acidovorax citrulli AAC00-1] Length = 298 Score = 97.4 bits (241), Expect = 7e-19, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 50/161 (31%), Gaps = 29/161 (18%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 +IAL ID N A ++L + ++ Y + Sbjct: 14 RIALLIDADNAPAEM--------IDEILTELSTLGVISIRRAYGNWTKSALSGWQSKL-- 63 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124 + + ++F + R K++ D+ + VDA E ++ + I S D Sbjct: 64 --------LEFAVRPIQQFDYS----RRKNATDMAMTVDAMELLYTDRPDAFGIVSSDAD 111 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165 FT LV L+ K V + F+ Sbjct: 112 FTPLVMHLRAKGAAVYGFGAQQTPRP-----FVNACSRFLY 147 >gi|225018409|ref|ZP_03707601.1| hypothetical protein CLOSTMETH_02356 [Clostridium methylpentosum DSM 5476] gi|224948827|gb|EEG30036.1| hypothetical protein CLOSTMETH_02356 [Clostridium methylpentosum DSM 5476] Length = 246 Score = 97.4 bits (241), Expect = 8e-19, Method: Composition-based stats. Identities = 30/172 (17%), Positives = 51/172 (29%), Gaps = 29/172 (16%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + KIA+ ID N+ S K + + +L + Y ++ Sbjct: 1 MEQERKIAVLIDADNV--SQKYIKY------ILDEIAKHGLPTYKRIYGDWTSPQLARWK 52 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIF 119 ++++ G K+S D L +DA + S + I Sbjct: 53 ----------DVLLDYSITPIQQYSYTAG----KNSTDSALIIDAMDILYSHNINGFCIV 98 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 S D FT LV L+ V + + + F L L Sbjct: 99 SSDSDFTRLVVRLRESGMYVVGMGEKKTPKP-----FIAACEQFKYLEALAQ 145 >gi|114564810|ref|YP_752324.1| hypothetical protein Sfri_3658 [Shewanella frigidimarina NCIMB 400] gi|114336103|gb|ABI73485.1| protein of unknown function DUF88 [Shewanella frigidimarina NCIMB 400] Length = 242 Score = 97.4 bits (241), Expect = 8e-19, Method: Composition-based stats. Identities = 35/182 (19%), Positives = 59/182 (32%), Gaps = 37/182 (20%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M D +KIA+FID N A ID K+L +V Y + + Sbjct: 1 MKDK-DKIAVFIDADN------APAKKID--KVLSELARYGVVNIRKAYGNWKNANLKTW 51 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVI 118 + + ++F G K++ D+ L +D + ++ ++ + + Sbjct: 52 ----------EDVLHEYAIQPIQQFDLTKG----KNATDMALVIDVMDVLYTKDVDVICL 97 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 S D FT LV K + + F+ L DP Sbjct: 98 VSSDCDFTPLVTRALADGKTIIGFGERKAPMP-----FVNSCSRFLFLDD-------DPS 145 Query: 179 ED 180 ED Sbjct: 146 ED 147 >gi|254787275|ref|YP_003074704.1| hypothetical protein TERTU_3357 [Teredinibacter turnerae T7901] gi|237685617|gb|ACR12881.1| conserved hypothetical protein [Teredinibacter turnerae T7901] Length = 258 Score = 97.4 bits (241), Expect = 8e-19, Method: Composition-based stats. Identities = 54/184 (29%), Positives = 89/184 (48%), Gaps = 15/184 (8%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAI-VIRAYYYTTVVGDPE----QQ 59 K +F+D NL + G+ + + + K ++ V+RA Y V E + Sbjct: 1 MLKAGIFLDMENLNMNG---GWGMRFDVIRKLVEAQGTTVLRANVYIAVDNAREKYDFEY 57 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119 D + GF +V K + FT G + +K++ D++LAVDA Q+E L+++++ Sbjct: 58 REKAQARRDKMRLAGFHIVEKEIRRFTNADGTQNIKANADLDLAVDAMLQAENLDYILLG 117 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE--IARDP 177 +GDG F LV ALQ K K+V V+ S +LRR+ DY+ A + I DP Sbjct: 118 TGDGDFLRLVRALQSKGKRVDAVAI-----HNVSGELRREVDYYFHGATIPGLLPIKNDP 172 Query: 178 DEDK 181 + + Sbjct: 173 KKIR 176 >gi|85374093|ref|YP_458155.1| hypothetical protein ELI_06330 [Erythrobacter litoralis HTCC2594] gi|84787176|gb|ABC63358.1| hypothetical protein ELI_06330 [Erythrobacter litoralis HTCC2594] Length = 245 Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 56/172 (32%), Gaps = 29/172 (16%) Query: 1 MFDPR-EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 M D + IAL ID N ID +L V Y + Q Sbjct: 1 MPDTELKNIALLIDADN------TTPKGIDP--VLTVMAELGQVNIKRAYGNFAKNNLQN 52 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLV 117 + + + + ++F G K++ D+ + +DA + ++ Sbjct: 53 WDKITH----------KYGIRPQQQFDLTAG----KNATDMAMTIDAIDLLYQGKVDGFG 98 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 I S D FT LV L++ V + D + F+D+ L Sbjct: 99 IMSSDSDFTPLVTRLRQDGLVVYGFGSTK----KTPDAFKSACTRFIDIDAL 146 >gi|225165548|ref|ZP_03727367.1| conserved hypothetical protein [Opitutaceae bacterium TAV2] gi|224800202|gb|EEG18613.1| conserved hypothetical protein [Opitutaceae bacterium TAV2] Length = 280 Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats. Identities = 29/170 (17%), Positives = 52/170 (30%), Gaps = 28/170 (16%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M + ++IA+ ID N+ S K + D LL V Y + Sbjct: 1 MENNDKRIAVLIDAENV--SFKLVDEIFDEIALL------GRVTHRRVYGDFTTSHMTGW 52 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVI 118 + + + + G K+S D+ L +DA + + ++ + I Sbjct: 53 NAVATDFA----------LRQVTQRHSKNG----KNSSDIVLVIDAMDILHAGKVDAICI 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 S D FT L + V + + + F L Sbjct: 99 VSNDNDFTRLAMRIVEAGLDVIGLGE----EGKTGHEFVKACSTFKHLTD 144 >gi|302325583|gb|ADL24784.1| conserved domain protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 253 Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 37/167 (22%), Positives = 68/167 (40%), Gaps = 27/167 (16%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M + A+F+D NL + G L+K+ +S+ V+ Y Sbjct: 19 MENN---TAVFVDAENLTFWAYNNGVH----DLMKSLQSQGPVVIRKAYGKWTSPQLS-- 69 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVI 118 PL + NGF+++ + K+S D+++ VDA E + L+ +V+ Sbjct: 70 ----PLQQEFNINGFELI--------QTYHPITGKNSADIKMVVDAMEAATNPCLQTIVL 117 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165 +GD F+ L L+ KKV V S S+ ++ +++ Sbjct: 118 ATGDSDFSPLFRKLREMGKKVIGV----GPLSKLSECVQSSCTHYIY 160 >gi|261414502|ref|YP_003248185.1| protein of unknown function DUF88 [Fibrobacter succinogenes subsp. succinogenes S85] gi|261370958|gb|ACX73703.1| protein of unknown function DUF88 [Fibrobacter succinogenes subsp. succinogenes S85] Length = 235 Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 37/167 (22%), Positives = 68/167 (40%), Gaps = 27/167 (16%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M + A+F+D NL + G L+K+ +S+ V+ Y Sbjct: 1 MENN---TAVFVDAENLTFWAYNNGVH----DLMKSLQSQGPVVIRKAYGKWTSPQLS-- 51 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVI 118 PL + NGF+++ + K+S D+++ VDA E + L+ +V+ Sbjct: 52 ----PLQQEFNINGFELI--------QTYHPITGKNSADIKMVVDAMEAATNPCLQTIVL 99 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165 +GD F+ L L+ KKV V S S+ ++ +++ Sbjct: 100 ATGDSDFSPLFRKLREMGKKVIGV----GPLSKLSECVQSSCTHYIY 142 >gi|295094936|emb|CBK84027.1| Uncharacterized conserved protein [Coprococcus sp. ART55/1] Length = 320 Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats. Identities = 27/177 (15%), Positives = 55/177 (31%), Gaps = 30/177 (16%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 K A+ ID N+ S+K + D + Y + Sbjct: 11 KYAILIDSENV--SAKYIESIFD------ELSRLGSITVRKIYGDWSKNNNG-------- 54 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124 W + ++F+ G K+S D + +DA + + ++ + + D Sbjct: 55 --WDKDCLLSYSIQPVQQFSYTAG----KNSTDSAMIIDAMDLLYTSNIDGFCLVTSDSD 108 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK-NEIARDPDED 180 FT L + L+ K+V + F L L ++ + ++ Sbjct: 109 FTRLASRLREAGKQVIGMGERK-----TPKAFVSACTSFKILDSLVTEDLNKPASKN 160 >gi|149184574|ref|ZP_01862892.1| hypothetical protein ED21_27688 [Erythrobacter sp. SD-21] gi|148831894|gb|EDL50327.1| hypothetical protein ED21_27688 [Erythrobacter sp. SD-21] Length = 241 Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 55/184 (29%), Gaps = 29/184 (15%) Query: 1 MFDPR-EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 M D + IAL ID N ID +L V Y Q Sbjct: 1 MSDKELKNIALLIDADN------TTPRGIDP--VLTVMAELGQVNIKRAYGNFTKKNLQG 52 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLV 117 + + ++F K++ D+ + +DA + ++ Sbjct: 53 WDKY----------SHKFGILPYQQFD----MTTGKNATDMAMTIDAIDLLYQGKVDGFG 98 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 I S D FT L L++ V S D + F+D+ L A +P Sbjct: 99 IMSSDSDFTPLATRLRQDGLIVYGF----GSKSKTPDAFKSACTRFIDIDALIAGAADEP 154 Query: 178 DEDK 181 K Sbjct: 155 APSK 158 >gi|330952960|gb|EGH53220.1| hypothetical protein PSYCIT7_16619 [Pseudomonas syringae Cit 7] Length = 117 Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 48/123 (39%), Gaps = 12/123 (9%) Query: 45 RAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAV 104 A+ Y GD S L GF V K + ++ K DV + + Sbjct: 1 HAFAYAIDRGD-----SKQQQFQQILRNLGFTVRLKPYIQRSDGSA----KGDWDVGITI 51 Query: 105 DAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 D + + ++ +V+ SGDG F L+ + K + + P + ++ L R A ++ Sbjct: 52 DIMDFAPQVDEIVLASGDGDFDMLLERVIS---KHGVEAVAYGVPGLTANSLIRAASRYV 108 Query: 165 DLA 167 + Sbjct: 109 PIE 111 >gi|325001928|ref|ZP_08123040.1| hypothetical protein PseP1_24341 [Pseudonocardia sp. P1] Length = 148 Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 37/166 (22%), Positives = 61/166 (36%), Gaps = 23/166 (13%) Query: 1 MFDPREKIALFIDGANLYASSKA-LGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58 M E+IAL +D NL ++ LG D+ + A R V+ Y Sbjct: 1 MAHEDERIALLLDYENLAIGARDGLGVVPFDFGPVADALAERGRVVVRRAYA-------- 52 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG---LEH 115 +S + +++ + K++ D++LAVDA E + + Sbjct: 53 DWSAFDEDRRLMARAQVELIEIPQRI------GGSRKNAADIKLAVDAIELAYEREFVTT 106 Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 I +GD FT L+ L+ K+V + S S L D Sbjct: 107 FAIATGDSDFTPLMHKLRELDKRVIGI----GVQSSTSALLPPACD 148 >gi|328955609|ref|YP_004372942.1| hypothetical protein Corgl_1019 [Coriobacterium glomerans PW2] gi|328455933|gb|AEB07127.1| hypothetical protein Corgl_1019 [Coriobacterium glomerans PW2] Length = 310 Score = 95.9 bits (237), Expect = 2e-18, Method: Composition-based stats. Identities = 30/170 (17%), Positives = 53/170 (31%), Gaps = 29/170 (17%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 D K A+ ID N+ D + +L + I Y + Sbjct: 5 LDSDLKFAILIDADNI--------SDKYIKIVLDEVANYGIATYKRIYGDWTSPRLASWK 56 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIF 119 + ++++ G K++ D + +DA + S ++ I Sbjct: 57 ----------NCLLENSILPMQQYSYTYG----KNATDSAMIIDAMDILYSGTVDGFTIV 102 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 S D FT LVA L+ +V + + S + F L L Sbjct: 103 SSDSDFTRLVARLRESGMQVIGMGEQKTPEPFIS-----ACNQFKYLDLL 147 >gi|224827245|ref|ZP_03700339.1| protein of unknown function DUF88 [Lutiella nitroferrum 2002] gi|224600534|gb|EEG06723.1| protein of unknown function DUF88 [Lutiella nitroferrum 2002] Length = 258 Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 24/167 (14%), Positives = 48/167 (28%), Gaps = 30/167 (17%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +A+ ID N+ + G+ D +L+ ++ Y Sbjct: 1 MANVAVLIDADNV-----SPGWIED---VLEEAGKLGVLALKRVYGDFSR---------- 42 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGD 122 + ++F G K++ D+ L +DA + S + + S D Sbjct: 43 -HDKAWRDLCARFAIHPIQQFPNTKG----KNASDITLVIDAMDMLHSGRYQSFCLVSSD 97 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 F+ L L+ +V F+ + L Sbjct: 98 SDFSRLATRLREDGLEVWGFGEEK-----TPSAFVNACSKFVYVEVL 139 >gi|84500442|ref|ZP_00998691.1| hypothetical protein OB2597_10806 [Oceanicola batsensis HTCC2597] gi|84391395|gb|EAQ03727.1| hypothetical protein OB2597_10806 [Oceanicola batsensis HTCC2597] Length = 236 Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 30/174 (17%), Positives = 57/174 (32%), Gaps = 29/174 (16%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M + R A+ ID N+ A + +LK S Y + Sbjct: 1 MPETRPLYAVLIDADNIPARF--------AQAILKEITSFGEPALRRVYGDWGAE----- 47 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVI 118 L P + + G + + K++ D+ L +DA + + + V+ Sbjct: 48 -RLRPWTEQVRELGLVAH--------QETANTKGKNASDIGLVIDAMDILHTGRFDGFVL 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 S D FT L ++ + V + + LR + F+ + + E Sbjct: 99 VSSDSDFTALANRVREQGLDVIGIGESKAPE-----SLRNVCNRFILIENIVEE 147 >gi|260574190|ref|ZP_05842195.1| protein of unknown function DUF88 [Rhodobacter sp. SW2] gi|259023656|gb|EEW26947.1| protein of unknown function DUF88 [Rhodobacter sp. SW2] Length = 252 Score = 95.5 bits (236), Expect = 3e-18, Method: Composition-based stats. Identities = 29/185 (15%), Positives = 58/185 (31%), Gaps = 32/185 (17%) Query: 1 MFDPR-EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 M +PR ++ + ID N+ AS + + + Y Sbjct: 1 MAEPRAPRLCVLIDADNVPASY--------ATAIFEEVAALGEASVRRIYGDWSAVRLGG 52 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLV 117 ++ + ++F+ G K++ D+ L + A + S + V Sbjct: 53 WARQVA----------ALGLVADQQFSNTKG----KNASDIGLVISAMDFLHSGLFDAFV 98 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 + S D FT L A ++ + V + + R F+ + L E Sbjct: 99 LVSSDSDFTRLAARIREQGLDVYGIGEKK-----TPEAFRMACKRFIYVENLGAE--EPA 151 Query: 178 DEDKK 182 E + Sbjct: 152 REAPR 156 >gi|77461998|ref|YP_351502.1| hypothetical protein RSP_1459 [Rhodobacter sphaeroides 2.4.1] gi|126460888|ref|YP_001042002.1| hypothetical protein Rsph17029_0110 [Rhodobacter sphaeroides ATCC 17029] gi|332559925|ref|ZP_08414247.1| hypothetical protein RSWS8N_12720 [Rhodobacter sphaeroides WS8N] gi|77386416|gb|ABA77601.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1] gi|126102552|gb|ABN75230.1| conserved hypothetical protein [Rhodobacter sphaeroides ATCC 17029] gi|332277637|gb|EGJ22952.1| hypothetical protein RSWS8N_12720 [Rhodobacter sphaeroides WS8N] Length = 248 Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 29/184 (15%), Positives = 59/184 (32%), Gaps = 31/184 (16%) Query: 1 MFDPR-EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 M DPR ++ + ID N+ A+ + + + Y Sbjct: 1 MSDPRAPRLCVLIDADNVPANY--------AEAIFEEIAALGEASVRRIYGDWSA----- 47 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLV 117 L+ + ++F+ G K++ D+ L + A + S + V Sbjct: 48 -----MRLNAWAKKVAALGLVADQQFSNTKG----KNASDIGLVISAMDFLHSGLFDGFV 98 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 + S D FT L A ++ + V + + R F+ + L ++ Sbjct: 99 LVSSDSDFTRLAARIREQGLDVYGIGEKK-----TPEAFRMACKRFIYVENLGSD-EPPA 152 Query: 178 DEDK 181 E + Sbjct: 153 REPR 156 >gi|229815424|ref|ZP_04445756.1| hypothetical protein COLINT_02472 [Collinsella intestinalis DSM 13280] gi|229808957|gb|EEP44727.1| hypothetical protein COLINT_02472 [Collinsella intestinalis DSM 13280] Length = 301 Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 30/186 (16%), Positives = 58/186 (31%), Gaps = 31/186 (16%) Query: 1 MFD--PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58 MF+ + A+ ID N+ + + +L + + Y Sbjct: 1 MFETTSELRFAVLIDADNV--------SEKYIKVILDEISNAGVATYKRIYGDWTSPRLA 52 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHL 116 + ++++ G K++ D + +DA + S ++ Sbjct: 53 SWKS----------CLLDHSIIPMQQYSYTYG----KNATDSAMIIDAMDILYSGTVDGF 98 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 I S D FT LVA L+ V + + S + F L L + + Sbjct: 99 AIVSSDSDFTRLVARLRESGMIVIGMGEQKTPKPFIS-----ACNQFKYLDLLYAQRQDE 153 Query: 177 PDEDKK 182 ED + Sbjct: 154 ESEDAQ 159 >gi|256822960|ref|YP_003146923.1| hypothetical protein Kkor_1743 [Kangiella koreensis DSM 16069] gi|256796499|gb|ACV27155.1| protein of unknown function DUF88 [Kangiella koreensis DSM 16069] Length = 236 Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 29/167 (17%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + + IALF+D N ASSK + +L + +VI Y + + Sbjct: 1 MEHNKHIALFVDADN--ASSKY------FDLILSDLANHGMVIIRKAYGNWKNANLKGW- 51 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIF 119 + + ++F G K++ D+ +A+D + + ++ + Sbjct: 52 ---------EDILLEFAIQPIQQFDLTKG----KNATDLAMAIDVMDVLYGKDVDIFCLV 98 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 + D FT L L + K V D R F++L Sbjct: 99 TSDCDFTPLATRLINEGKLVFGYGETK-----TPDAFRNACTRFLEL 140 >gi|126729949|ref|ZP_01745761.1| hypothetical protein SSE37_16263 [Sagittula stellata E-37] gi|126709329|gb|EBA08383.1| hypothetical protein SSE37_16263 [Sagittula stellata E-37] Length = 233 Score = 94.7 bits (234), Expect = 5e-18, Method: Composition-based stats. Identities = 32/186 (17%), Positives = 57/186 (30%), Gaps = 31/186 (16%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M + +A+ IDG N S K D S Y + Sbjct: 1 MPNDTRLLAILIDGDN--TSPKYARALFD------EIASLGEASVRRVYGDFASQQMNGW 52 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVI 118 S + + + K++ D+ L +DA + + V+ Sbjct: 53 SRVTA----------EYGLVPL----HSPANTVGKNASDISLVIDAMDLMHTERFDGFVL 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL--KNEIARD 176 S D FT L + ++ + V + D R+ F+ L + E ++D Sbjct: 99 VSSDSDFTRLASRIREQGLDVYGMGMQK-----TPDAFRKACKRFIYLENIDSAPEESKD 153 Query: 177 PDEDKK 182 DK+ Sbjct: 154 RKTDKR 159 >gi|75674368|ref|YP_316789.1| hypothetical protein Nwi_0169 [Nitrobacter winogradskyi Nb-255] gi|74419238|gb|ABA03437.1| Protein of unknown function DUF88 [Nitrobacter winogradskyi Nb-255] Length = 271 Score = 94.7 bits (234), Expect = 6e-18, Method: Composition-based stats. Identities = 29/183 (15%), Positives = 60/183 (32%), Gaps = 36/183 (19%) Query: 3 DPREKI---ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 +PR+++ A+FID N+ + + Y + + Sbjct: 4 EPRQRLPRFAVFIDAENVP--------PKFADGIFREIAQLGDAPVRLIYGNLSDPNLKG 55 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLV 117 ++ +V+ + E + + ++S D+ + +DA + + Sbjct: 56 WT--------------EVLPDHSLERRDPAVK--GRNSADMAIVIDAMDLLHDGRIHGFC 99 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 + S D FT L A L+R+ V D RR + F+ L L + Sbjct: 100 LISSDSDFTGLAARLRREGANVYGFGEKK-----TPDCFRRACNRFISLESLLPR--KPA 152 Query: 178 DED 180 + Sbjct: 153 RKP 155 >gi|323484352|ref|ZP_08089719.1| hypothetical protein HMPREF9474_01470 [Clostridium symbiosum WAL-14163] gi|323692362|ref|ZP_08106599.1| maebl [Clostridium symbiosum WAL-14673] gi|323402346|gb|EGA94677.1| hypothetical protein HMPREF9474_01470 [Clostridium symbiosum WAL-14163] gi|323503582|gb|EGB19407.1| maebl [Clostridium symbiosum WAL-14673] Length = 298 Score = 94.3 bits (233), Expect = 6e-18, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 55/183 (30%), Gaps = 29/183 (15%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 D ++KIA+ ID N+ SK + ++ I Y + Sbjct: 1 MDKQDKIAVLIDAENV---SKKY-----IKLIMDEVSDYGIATYKRIYGDFTNPSVMAWQ 52 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIF 119 +F G K++ D L +DA + S + + Sbjct: 53 DALRDFA----------LTPVFQFNYTKG----KNASDSALIIDAMDILYSGKVNGFCLV 98 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 + D FT L L+ V + + L + F L L E + E Sbjct: 99 TSDSDFTKLAIRLREAGMIVIGMGEQK-----TPNSLVSACETFKFLDLLYQESLEEQAE 153 Query: 180 DKK 182 D+K Sbjct: 154 DEK 156 >gi|261367119|ref|ZP_05980002.1| conserved hypothetical protein [Subdoligranulum variabile DSM 15176] gi|282571242|gb|EFB76777.1| conserved hypothetical protein [Subdoligranulum variabile DSM 15176] Length = 275 Score = 94.3 bits (233), Expect = 6e-18, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 54/169 (31%), Gaps = 31/169 (18%) Query: 7 KIALFIDGANLYASSKALGFDIDYRK-LLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 K+A+ ID N+ Y K +L S + Y L Sbjct: 5 KLAILIDADNI---------SPKYVKVILDEAASFGVAACKRIYGDWSD------VRLKS 49 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDG 123 D L N ++++ G K++ D + +DA + L+ I S D Sbjct: 50 WKDALLNNSI----IPIQQYSYTTG----KNATDSAMIIDAMDLLYGGNLDGFCIVSSDS 101 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 FT L A L+ K V + + + D F L + + Sbjct: 102 DFTRLAARLREAGKLVIGMGESKALGP-----FVKACDQFKYLDLILDH 145 >gi|159042661|ref|YP_001531455.1| hypothetical protein Dshi_0105 [Dinoroseobacter shibae DFL 12] gi|157910421|gb|ABV91854.1| conserved hypothetical protein [Dinoroseobacter shibae DFL 12] Length = 236 Score = 94.3 bits (233), Expect = 7e-18, Method: Composition-based stats. Identities = 28/172 (16%), Positives = 56/172 (32%), Gaps = 31/172 (18%) Query: 2 FDPREK--IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 R++ +A+ ID N+ A +LK S Y + Sbjct: 1 MPNRDRPLLAVLIDADNVPAKF--------AEAILKEVASIGEPALRRVYGDWSSGRLRN 52 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLV 117 ++ V + ++ K++ D+ L +DA + + V Sbjct: 53 WADK--------------VLSLGLVAHQDTANTTGKNASDIGLVIDAMDILHGGRFDGFV 98 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 + S D FT+L L+ K+V + + LR + F+ + + Sbjct: 99 LVSSDSDFTSLANRLREDGKEVIGIGEKKAPE-----SLRNVCNRFIFIENI 145 >gi|290968037|ref|ZP_06559586.1| conserved hypothetical protein [Megasphaera genomosp. type_1 str. 28L] gi|290781943|gb|EFD94522.1| conserved hypothetical protein [Megasphaera genomosp. type_1 str. 28L] Length = 278 Score = 93.9 bits (232), Expect = 7e-18, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 51/170 (30%), Gaps = 29/170 (17%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 D K+A+ ID N+ SSK +L + VI Y + Sbjct: 1 MDHEMKLAVVIDAENI--SSKY------IEVILSEANNLGDVIYKRIYGNWTTPQMASWR 52 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIF 119 + ++++ K+S D L +D + L+ I Sbjct: 53 TTILDNA----------IQPVQQYSN----TIRKNSSDSALIIDTMDLLYQSNLDGFCIV 98 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 S D FT L + L+ K V + + F+ L L Sbjct: 99 SSDSDFTRLASRLRESQKYVLGMGESK-----TPRSFISACNKFLYLDIL 143 >gi|116671994|ref|YP_832927.1| hypothetical protein Arth_3452 [Arthrobacter sp. FB24] gi|116612103|gb|ABK04827.1| protein of unknown function DUF88 [Arthrobacter sp. FB24] Length = 282 Score = 93.9 bits (232), Expect = 7e-18, Method: Composition-based stats. Identities = 35/178 (19%), Positives = 66/178 (37%), Gaps = 24/178 (13%) Query: 1 MFDPREK-IALFIDGANLYASSKALGFDI-------DYRKLLKAFRSRAIVIRAYYYTTV 52 M +++ +A+F+D NL+ K + D K+++ Y Sbjct: 1 MAGSQQRNVAIFLDMENLFGGYKNDVTSVPLATVVRDIEKVVEDTGLGGQTALTRAYANW 60 Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS-- 110 + + K + F+ + K++ D+EL VDA E + Sbjct: 61 GRADMGGYRSQLLAHN----------IKPVQVFSF---DQSSKNAADIELVVDALEVAAD 107 Query: 111 -EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 +E V+ SGDG F L+ L K+ + +T + + L+ AD+F + Sbjct: 108 MPWIELFVVVSGDGDFVPLLRRLHALGKRSLVATTSQPKAGVVNKVLQSVADHFHVID 165 >gi|254443296|ref|ZP_05056772.1| hypothetical protein VDG1235_1532 [Verrucomicrobiae bacterium DG1235] gi|198257604|gb|EDY81912.1| hypothetical protein VDG1235_1532 [Verrucomicrobiae bacterium DG1235] Length = 242 Score = 93.9 bits (232), Expect = 7e-18, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 52/165 (31%), Gaps = 29/165 (17%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 E IAL ID N A+ ID+ ++ S V Y + Sbjct: 7 SSESIALLIDADNAPAA------KIDF--IIAELASYGSVDIRRAYGNWKKAALSGW--- 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSG 121 + + F G K++ D+ L ++A + ++ L + S Sbjct: 56 -------EKVLHDYAIQPIQHFDIVKG----KNASDMGLLIEAMDILYTKNLGTFCLVSS 104 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 D FT LV L+ K+V + + F+ L Sbjct: 105 DCDFTPLVLRLRADGKQVIGFGDAKTPAPFVA-----SCTRFLYL 144 >gi|50955250|ref|YP_062538.1| hypothetical protein Lxx16560 [Leifsonia xyli subsp. xyli str. CTCB07] gi|50951732|gb|AAT89433.1| conserved hypothetical protein [Leifsonia xyli subsp. xyli str. CTCB07] Length = 362 Score = 93.9 bits (232), Expect = 8e-18, Method: Composition-based stats. Identities = 37/213 (17%), Positives = 64/213 (30%), Gaps = 49/213 (23%) Query: 1 MFDPRE-KIALFIDGANLYAS---------------------------SKALGFDIDYRK 32 M +P + ++A++ID N+ S +K +D Sbjct: 10 MSEPGDGRVAVYIDFDNIVISRYDQVHGRGQFMRDKQKTGALPKPAFAAKLAEARVDLGA 69 Query: 33 LLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRK 92 ++ S ++ Y ++ G V Sbjct: 70 IIDFASSFGTIVLTRAYADWSSAVNAEYRGQL--------VGRAVDLVQL-----FPAAA 116 Query: 93 RVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDP 149 K+ D+ LAVD E L H+VI +GD + L ++R + V + Sbjct: 117 YGKNGGDIRLAVDTVEDLFRLPELTHVVIVAGDSDYIPLAQRIKRLGRYVIGIGIA---- 172 Query: 150 SMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182 + L D F+ L IARD + Sbjct: 173 GSTARSLAAACDEFVSYDDL-PGIARDEAAQTE 204 >gi|296129138|ref|YP_003636388.1| protein of unknown function DUF88 [Cellulomonas flavigena DSM 20109] gi|296020953|gb|ADG74189.1| protein of unknown function DUF88 [Cellulomonas flavigena DSM 20109] Length = 474 Score = 93.9 bits (232), Expect = 8e-18, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 60/183 (32%), Gaps = 29/183 (15%) Query: 7 KIALFIDGANLYASSKALG------FDIDYRKLLKAFRSR----AIVIRAYYYTTVVGDP 56 + ALF+D N+Y L F D L + R + Sbjct: 12 RSALFVDFDNVYIGLARLDPRAAEAFATDPGHWLSELGQGSDVDGDLTRRFLVRA----C 67 Query: 57 EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGL 113 S GFQVV ++ KSS D+ L +DA + Sbjct: 68 YLNPSVYSRFRPNFTRAGFQVVDCP-------SLTQQGKSSADINLVLDAVDALAAPTRY 120 Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 + VI S D FT L + ++VTI++ A+ R AD + L + + Sbjct: 121 DEFVIVSADADFTPLAQRCRADDRRVTIITASP-----AASAYRSVADTVIGADALADLV 175 Query: 174 ARD 176 + Sbjct: 176 TQT 178 >gi|47104079|ref|YP_015508.1| hypothetical protein PBPRC0054 [Photobacterium profundum SS9] gi|46911643|emb|CAG17992.1| conserved protein of unknown functions [Photobacterium profundum SS9] Length = 341 Score = 93.9 bits (232), Expect = 9e-18, Method: Composition-based stats. Identities = 24/180 (13%), Positives = 58/180 (32%), Gaps = 31/180 (17%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M + K+ALFID N +S + +L ++ + Q + Sbjct: 1 MNTAQSKVALFIDADNASSS--------NLEFVLSELKNHGDTCIRKAFGNWKRPNLQSW 52 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG----LEHL 116 + K E + + K++ D+ + + + ++ + Sbjct: 53 EKILC--------------KNGIESVQQFDLTKNKNATDIAITISVMDFIHRKDLNVDTI 98 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 + + D FT LV +++ V + L+ +F+ + +I ++ Sbjct: 99 CLMTSDCDFTPLVTRVRQSGFNVICAGENKTPAP-----LKESCTHFICTEKSETKITKE 153 >gi|296284143|ref|ZP_06862141.1| hypothetical protein CbatJ_10981 [Citromicrobium bathyomarinum JL354] Length = 245 Score = 93.9 bits (232), Expect = 9e-18, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 59/184 (32%), Gaps = 29/184 (15%) Query: 1 MFDPR-EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 M + + IAL ID N ID +L V Y + Sbjct: 4 MTEETLKNIALLIDADN------TTPKGIDP--VLTVMAELGQVNIKRAYGNFAKNNLAN 55 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLV 117 + + + + ++F G K++ D+ + +DA + ++ Sbjct: 56 WDKITH----------KYGIRPQQQFDLTAG----KNATDMAMTIDAIDLLYQGKVDGFG 101 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 I S D FT LV L++ V + + + F+D+ L + + Sbjct: 102 IMSSDSDFTPLVTRLRQDGLVVYGFGST----NKTPAAFKSACTRFIDIDALIKGASDEQ 157 Query: 178 DEDK 181 + K Sbjct: 158 ETPK 161 >gi|121594076|ref|YP_985972.1| hypothetical protein Ajs_1706 [Acidovorax sp. JS42] gi|120606156|gb|ABM41896.1| protein of unknown function DUF88 [Acidovorax sp. JS42] Length = 507 Score = 93.9 bits (232), Expect = 9e-18, Method: Composition-based stats. Identities = 33/200 (16%), Positives = 68/200 (34%), Gaps = 43/200 (21%) Query: 4 PREKIALFIDGANLYASSKAL------GFDIDYRKLLKAFRSR-----------AIVIRA 46 PR K ALF+D N+++ + L F + + ++ Sbjct: 12 PRMKSALFVDFDNVFSGLRRLDPIAADHFASQPQSWMHWIAQSLEPPPHATAGARRLLVR 71 Query: 47 YYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA 106 Y + GF+++ A K+S D+ + +D Sbjct: 72 RCYLNP--------QVYQRFRPAFNRAGFEIIDCPAM-------TSGGKTSTDIHMVLDI 116 Query: 107 FEQSEG---LEHLVIFSGDGCFTTLVAALQRKVKKVTI--VSTVLSDPSMASDQLRRQAD 161 + + + ++ S D FT ++ L+R ++ T+ + + ++D L Q D Sbjct: 117 VDLLQHQVHYDEFIVLSADADFTPVLRKLRRWDRRTTVLAIGFPSAAYQASADLLIDQ-D 175 Query: 162 YFMDLAYLKNEIARDPDEDK 181 F L+ + R+ E Sbjct: 176 AF-----LREALRREETETP 190 >gi|114764063|ref|ZP_01443302.1| hypothetical protein 1100011001333_R2601_15432 [Pelagibaca bermudensis HTCC2601] gi|114543421|gb|EAU46436.1| hypothetical protein R2601_15432 [Roseovarius sp. HTCC2601] Length = 236 Score = 93.5 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 52/189 (27%), Gaps = 34/189 (17%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M + +A+ ID N S K D S Y + Sbjct: 1 MAEDTRLLAVLIDADN--TSPKYAKAIFD------EIASLGEASVRRVYGDFASQQISGW 52 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVI 118 S + G A K+S D+ L +DA + + V+ Sbjct: 53 SKI------SAEFGLVPHHSPA--------NTVGKNSSDISLVIDAMDLMHTGRFDGFVV 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA---- 174 S D FT L + ++ + V + D R+ F+ L L Sbjct: 99 VSSDSDFTRLASRIREQGLDVYGMGMQK-----TPDAFRKACKRFIFLENLDGAPEQKTG 153 Query: 175 -RDPDEDKK 182 R P K Sbjct: 154 DRAPRATGK 162 >gi|146283893|ref|YP_001174046.1| hypothetical protein PST_3576 [Pseudomonas stutzeri A1501] gi|145572098|gb|ABP81204.1| uncharacterized conserved protein [Pseudomonas stutzeri A1501] Length = 243 Score = 93.5 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 21/147 (14%), Positives = 41/147 (27%), Gaps = 21/147 (14%) Query: 37 FRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKS 96 + Y + + ++F G K+ Sbjct: 1 MAKYGVASVKRIYGDWTKPNLGSWKK----------VLLDHSIQPIQQFAYTSG----KN 46 Query: 97 SMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASD 154 + D L +DA + + + + S D FT L A ++ + V + S Sbjct: 47 ATDSSLIIDAMDLLYTRRFDGFCLVSSDSDFTRLAARIREEGLTVYGFGEQKTPSPFVS- 105 Query: 155 QLRRQADYFMDLAYLKNEIARDPDEDK 181 D F+ L+ + A+ E Sbjct: 106 ----ACDKFIYTEILRADAAKASVEPP 128 >gi|306821460|ref|ZP_07455063.1| conserved hypothetical protein [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550475|gb|EFM38463.1| conserved hypothetical protein [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 572 Score = 93.5 bits (231), Expect = 1e-17, Method: Composition-based stats. Identities = 28/181 (15%), Positives = 52/181 (28%), Gaps = 31/181 (17%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 D ++K A+ ID N+ ++ + +V Y + Sbjct: 1 MDDQKKYAVLIDAENIAYKYVKY--------IMGEMANYGVVTYKRAYMDWSAQNATGWK 52 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIF 119 + + G K+S D + +DA + S+ ++ I Sbjct: 53 S----------VLLENAISPVQSIAYTSG----KNSTDSTIIIDAMDILYSKTVDGFCIV 98 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF--MDLAYLKNEIARDP 177 S D FT L L+ V + + F ++L K EI + Sbjct: 99 SSDSDFTKLATRLRESGMTVIGMGESK-----TPKAFIEACNSFKVLNLVVNKEEIEKSD 153 Query: 178 D 178 Sbjct: 154 K 154 >gi|167770975|ref|ZP_02443028.1| hypothetical protein ANACOL_02329 [Anaerotruncus colihominis DSM 17241] gi|167667015|gb|EDS11145.1| hypothetical protein ANACOL_02329 [Anaerotruncus colihominis DSM 17241] Length = 286 Score = 93.2 bits (230), Expect = 1e-17, Method: Composition-based stats. Identities = 30/184 (16%), Positives = 53/184 (28%), Gaps = 32/184 (17%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 K A+ ID N+ D + +L + I Y + + Sbjct: 10 SDLKFAVLIDADNV--------SDKYIKIILDEISNDGIATYKRIYGDWTKPALVSWKSV 61 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSG 121 +++ G K+S D + +DA + S ++ I S Sbjct: 62 LLDNS----------ILPIQQYNYTTG----KNSTDSAMIIDAMDILYSGQVDGFCIVSS 107 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK---NEIARDPD 178 D FT L A L+ V + + F L L + +D D Sbjct: 108 DSDFTRLAARLRESGMIVVGMGERK-----TPKSFISACNRFKYLDILAQAEPAVQKDED 162 Query: 179 EDKK 182 ++ Sbjct: 163 CQRE 166 >gi|121583279|ref|YP_973715.1| hypothetical protein Pnap_4909 [Polaromonas naphthalenivorans CJ2] gi|120596537|gb|ABM39973.1| protein of unknown function DUF88 [Polaromonas naphthalenivorans CJ2] Length = 279 Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 50/161 (31%), Gaps = 30/161 (18%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 ++A+ +D N+ L+ V+ Y L Sbjct: 11 RVAVLVDCDNVTPEILEYA--------LRVIAQFGRVVLRRGYGN-----------HTTL 51 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124 + ++ ++ G K++ D+ LA+DA E + + + D Sbjct: 52 ANKWQEALVRLAFTPCLQYQYASG----KNTADIALALDALEAMFDNRADTFCLVTSDSD 107 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165 F L L+ + V IV D LR +D F + Sbjct: 108 FAYLCRKLRERGATVCIVGEAK-----TPDALRNASDQFFE 143 >gi|152983068|ref|YP_001352700.1| hypothetical protein mma_1010 [Janthinobacterium sp. Marseille] gi|151283145|gb|ABR91555.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 236 Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 30/187 (16%), Positives = 56/187 (29%), Gaps = 40/187 (21%) Query: 1 MFDPRE---KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M + + ++A+ +D N L+ V+ Y Sbjct: 1 MVENTKQNDRVAVLVDCDNTSPEILEYA--------LRVVAQFGRVVVRRGYGN------ 46 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEH 115 L + ++ ++ G K++ D+ LA+DA E + Sbjct: 47 -----HATLANKWQEALVRLAFTPCLQYQYAAG----KNTSDIALALDALEDLFDHRADT 97 Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 + + D F L L+ + V IV D LR +D F + + Sbjct: 98 YCLVTSDSDFAYLCRKLRERGATVCIVGEEK-----TPDALRNASDQFFEY-------QK 145 Query: 176 DPDEDKK 182 E+ K Sbjct: 146 PEVENAK 152 >gi|260574189|ref|ZP_05842194.1| protein of unknown function DUF88 [Rhodobacter sp. SW2] gi|259023655|gb|EEW26946.1| protein of unknown function DUF88 [Rhodobacter sp. SW2] Length = 246 Score = 92.4 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 61/165 (36%), Gaps = 37/165 (22%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +++A+ IDG NL A +++ + + Y + Sbjct: 15 KTQRVAVMIDGENLSAGLA--------GQIITKSLAFGRLTIKRVYGNAIR--------- 57 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSG 121 L W GF+++ K++ D+ L ++A E ++ LVI S Sbjct: 58 --LTQWEAAPGFRLI-----------HSGNGKNATDLLLCIEAMELVHSGLVDTLVIASS 104 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 D F+ L A L K ++V + ASD R+ F++L Sbjct: 105 DRDFSHLAAHLCEKGQQVIGMGEAK-----ASDAFRKACTRFIEL 144 >gi|146276115|ref|YP_001166274.1| hypothetical protein Rsph17025_0057 [Rhodobacter sphaeroides ATCC 17025] gi|145554356|gb|ABP68969.1| hypothetical protein Rsph17025_0057 [Rhodobacter sphaeroides ATCC 17025] Length = 246 Score = 92.4 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 27/184 (14%), Positives = 58/184 (31%), Gaps = 31/184 (16%) Query: 1 MFDPR-EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 M +PR ++ + ID N+ A+ + + + Y Sbjct: 1 MSEPRAPRLCVLIDADNVPANY--------AEAIFEEIAALGEASVRRIYGDWSA----- 47 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLV 117 L+ + ++F+ G K++ D+ L + A + S + V Sbjct: 48 -----MRLNAWAKKVAALGLVADQQFSNTKG----KNASDIGLVIAAMDFLHSGLFDGFV 98 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 + S D FT L A ++ + V + + R F+ + L ++ Sbjct: 99 LVSSDSDFTRLAARIREQGLDVYGIGEKK-----TPEAFRMACKRFIYVENLGSD-EPPA 152 Query: 178 DEDK 181 + Sbjct: 153 RGPR 156 >gi|154148166|ref|YP_001406735.1| hypothetical protein CHAB381_1180 [Campylobacter hominis ATCC BAA-381] gi|153804175|gb|ABS51182.1| protein containing DUF88 [Campylobacter hominis ATCC BAA-381] Length = 259 Score = 92.4 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 29/170 (17%), Positives = 50/170 (29%), Gaps = 29/170 (17%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 EK A+FID N+ K+ + Y + Sbjct: 2 NEKYAIFIDAENVSYKY--------INKVFELINVYPEPAIRRIYGDFSSQNLLGYKDEI 53 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEH--LVIFSGD 122 K ++F G K++ D+ L +D E + +I S D Sbjct: 54 ----------LSHALKPVQQFHSPNG----KNAADIALVIDIMEILNNTDIKNFIIVSSD 99 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 G F +L ++ K V + + + + D F L + E Sbjct: 100 GDFASLAIKIREKGGFVIGIGENKTQIN-----FIKACDEFFYLNEPEPE 144 >gi|325109651|ref|YP_004270719.1| hypothetical protein Plabr_3100 [Planctomyces brasiliensis DSM 5305] gi|324969919|gb|ADY60697.1| protein of unknown function DUF88 [Planctomyces brasiliensis DSM 5305] Length = 441 Score = 92.0 bits (227), Expect = 3e-17, Method: Composition-based stats. Identities = 33/178 (18%), Positives = 58/178 (32%), Gaps = 25/178 (14%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 +IA+F+D NL K G +L++ + Y Q Sbjct: 6 RIAIFVDTENLTGWVKQHG----IVRLIEEIGQTGHLFVRKAYGCWEQGNLQVQQ----- 56 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDGC 124 L+ GF++V K+S D+ + +D E E +V+ +GD Sbjct: 57 -QVLNRCGFELV--------HTFHPVGGKNSADIRITIDVMETVLCHDFETIVLATGDSD 107 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182 F+ L L + K + S SD + ++ + P + K Sbjct: 108 FSPLFRRLNQLGKHIIGA----GPHSPLSDSVASICQKYIY-TDVPPYATPKPAKPVK 160 >gi|210633171|ref|ZP_03297707.1| hypothetical protein COLSTE_01620 [Collinsella stercoris DSM 13279] gi|210159211|gb|EEA90182.1| hypothetical protein COLSTE_01620 [Collinsella stercoris DSM 13279] Length = 175 Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 58/173 (33%), Gaps = 31/173 (17%) Query: 1 MFDPRE--KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58 MF+ + A+ ID N+ S K + + +L + + Y Sbjct: 1 MFESTSELRFAVLIDADNI--SEKYV------KVVLDEISNAGVATYKRIYGDWTSPRLA 52 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHL 116 + LLD ++++ G K++ D + +DA + S ++ Sbjct: 53 SWKS--CLLDNS--------IIPMQQYSYTYG----KNATDSAMIIDAMDILYSGTVDGF 98 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 I S D FT LVA L+ V + + S + F L L Sbjct: 99 AIVSSDSDFTRLVARLRESGMVVIGMGEQKTPKPFIS-----ACNQFKYLDLL 146 >gi|312196812|ref|YP_004016873.1| hypothetical protein FraEuI1c_2978 [Frankia sp. EuI1c] gi|311228148|gb|ADP81003.1| protein of unknown function DUF88 [Frankia sp. EuI1c] Length = 553 Score = 91.6 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 63/185 (34%), Gaps = 46/185 (24%) Query: 7 KIALFIDGANLYASSKAL------GFDIDYRKLLKAFRS-----------RAIVIRAYYY 49 + ALF+D N++ + L F ++ + L + R ++ Y Y Sbjct: 15 RSALFVDFENIHMGLQRLDAAAANRFAVNPQCWLSWLETLAYPALGATDFRRDLLIRYCY 74 Query: 50 TTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE- 108 V + GF VV K+S D+ + +D + Sbjct: 75 LNPVS--------SARYRAYFTRAGFHVVDCP-------PLTAAGKNSADIHIVIDVLDI 119 Query: 109 --QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY---- 162 + +++ S D +T ++ L+ ++ I+++ S + R D+ Sbjct: 120 LGHPTRFDEVILLSADADYTPVMLRLRAHDRRTVIITSGPS-----ARAFRAACDHVVGE 174 Query: 163 --FMD 165 F+D Sbjct: 175 DAFID 179 >gi|257454371|ref|ZP_05619634.1| conserved hypothetical protein [Enhydrobacter aerosaccus SK60] gi|257448274|gb|EEV23254.1| conserved hypothetical protein [Enhydrobacter aerosaccus SK60] Length = 361 Score = 91.6 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 31/175 (17%), Positives = 56/175 (32%), Gaps = 29/175 (16%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 IA+ IDG N+ A + +L + + Y + Sbjct: 11 IAVLIDGDNINA--------KNIESILAKVSTLGTIACKRIYGDFKQGKLTTWD------ 56 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE-GLEHLVIFSGDGCFT 126 + K+ E + K++ D+ LA+DA + S + I S D F+ Sbjct: 57 --------DISLKLLLEQVHIPAYVKGKNATDIALAIDAVDLSYLDYDCFCIISSDSDFS 108 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY-LKNEIARDPDED 180 L L+ K KKV S + + D + + + E + + Sbjct: 109 ILAKNLRTKGKKVFGFG-----KSTTVESFKVACDDYFVMDDTIPPEPSNSATKP 158 >gi|326791130|ref|YP_004308951.1| hypothetical protein Clole_2039 [Clostridium lentocellum DSM 5427] gi|326541894|gb|ADZ83753.1| Domain of unknown function DUF88 [Clostridium lentocellum DSM 5427] Length = 275 Score = 91.6 bits (226), Expect = 4e-17, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 49/168 (29%), Gaps = 29/168 (17%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 ++KIA+ ID N+ + + ++ + I Y + Sbjct: 3 KQDKIAVLIDAENV--------SNKYIKLIMDEVNNYGIATYKRVYGDYSNPSVMAW--- 51 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSG 121 N + A + G KS+ D L +DA + S + + S Sbjct: 52 -------MKNLEEYALTPALQCNYTSG----KSASDSALIIDAMDILYSGKVSAFCLVSS 100 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 D FT L L+ V + L + F L L Sbjct: 101 DSDFTKLAMRLKEAGMNVIGMGEGK-----TPKSLVSACETFKYLDIL 143 >gi|323701153|ref|ZP_08112828.1| protein of unknown function DUF88 [Desulfotomaculum nigrificans DSM 574] gi|323533755|gb|EGB23619.1| protein of unknown function DUF88 [Desulfotomaculum nigrificans DSM 574] Length = 180 Score = 91.2 bits (225), Expect = 5e-17, Method: Composition-based stats. Identities = 35/174 (20%), Positives = 64/174 (36%), Gaps = 16/174 (9%) Query: 5 REKIALFIDGANLYASSKAL----GFDIDYRKLLKAFRSR--AIVIRAYYYTTVVGDPEQ 58 +++ +FIDG N + L IDY KL + + R YYYT + +Q Sbjct: 1 MKRVMVFIDGNNFEKAVTNLYGGSQQRIDYSKLANYLAGKRNGNLQRLYYYTAASDNDKQ 60 Query: 59 QFSPLHPLLDWLHYNGFQVVAK----VAKEFTENCGRKRVKSSMDVELAVDAFEQS--EG 112 + + +D L+ +AK + + DV +AVD + Sbjct: 61 KAASTKHFVDTLNKQVPNCIAKIGYLQVVGKDASGQDIYTEKGTDVNIAVDLVSLAFFNA 120 Query: 113 LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 + ++ S D + V ++ K V ++ V + L+ D + L Sbjct: 121 YDEAILLSADTDYEPAVNMARQLGKTV-VLGIVDRQK---AGYLKGLCDDHISL 170 >gi|294339327|emb|CAZ87683.1| conserved hypothetical protein [Thiomonas sp. 3As] Length = 268 Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 52/165 (31%), Gaps = 30/165 (18%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 D ++A+ +D N L+ V+ Y Sbjct: 20 DHESRVAVLVDCDNTTPEILEYA--------LRVVAQFGRVVLRRGYGN----------- 60 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFS 120 L + ++ +F G K++ D+ LA+DA E + + + + Sbjct: 61 HATLANKWQEALVRLAFTPCLQFQYAAG----KNTSDIALALDAVEALFDKRADTFCLVT 116 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165 D F L L+ + V IV S D LR +D F + Sbjct: 117 SDSDFAYLCRKLRERGATVHIVGEAKSP-----DALRNASDQFFE 156 >gi|256810620|ref|YP_003127989.1| protein of unknown function DUF88 [Methanocaldococcus fervens AG86] gi|256793820|gb|ACV24489.1| protein of unknown function DUF88 [Methanocaldococcus fervens AG86] Length = 195 Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 58/164 (35%), Gaps = 32/164 (19%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 +IAL IDG N+ F+ID K+ + ++ Y L Sbjct: 24 RIALLIDGPNM----LRKEFNIDLDKIREVLSEFGDIVIGRVYLN--------QYASDKL 71 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124 ++ + GF+ +DVE+AVDA E ++ + + D Sbjct: 72 IEAVINQGFEPKI--------------SAGDVDVEMAVDATELVFNPNIDTIAYVTRDAD 117 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F + + + KKV ++ S L+ ADY + + Sbjct: 118 FLPAIRKAKERGKKVIVIGAEPGF----STALQNIADYVIKIGE 157 >gi|15668658|ref|NP_247457.1| hypothetical protein MJ_0482 [Methanocaldococcus jannaschii DSM 2661] gi|2496000|sp|Q57905|Y482_METJA RecName: Full=Uncharacterized protein MJ0482 gi|1591185|gb|AAB98473.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM 2661] Length = 240 Score = 91.2 bits (225), Expect = 6e-17, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 58/164 (35%), Gaps = 32/164 (19%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 +IAL IDG N+ F+ID K+ + ++ Y L Sbjct: 71 RIALLIDGPNM----LRKEFNIDLDKIREVLSEFGDIVIGRVYLN--------QYASDKL 118 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124 ++ + GF+ +DVE+AVDA E ++ + + D Sbjct: 119 IEAVINQGFEPKI--------------SAGDVDVEMAVDATELVFNPNIDTIAYVTRDAD 164 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F + + + KKV ++ S L+ ADY + + Sbjct: 165 FLPAIRKAKERGKKVIVIGAEPGF----STALQNIADYVIKIGE 204 >gi|254427448|ref|ZP_05041155.1| hypothetical protein ADG881_678 [Alcanivorax sp. DG881] gi|196193617|gb|EDX88576.1| hypothetical protein ADG881_678 [Alcanivorax sp. DG881] Length = 235 Score = 90.8 bits (224), Expect = 7e-17, Method: Composition-based stats. Identities = 27/172 (15%), Positives = 52/172 (30%), Gaps = 29/172 (16%) Query: 12 IDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLH 71 ID N +D L + Y + Sbjct: 2 IDADN------TPPKIVD--GLFEEIAKFGTASVKRIYGDWTKPNLGGWKS--------- 44 Query: 72 YNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLV 129 V+ K + + + + K++ D + +DA + ++ L + S D FT L Sbjct: 45 -----VLLKHSVQPIQQFAYTQGKNATDCSMIIDAMDLLYTKQLSGFCLVSSDSDFTRLA 99 Query: 130 AALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 A L+ + V + + D F+ L+++ A + DK Sbjct: 100 ARLREEGLTVYGFGERKTPGPFVA-----ACDKFIYTEVLRSDHAPESTSDK 146 >gi|291559982|emb|CBL38782.1| Uncharacterized conserved protein [butyrate-producing bacterium SSC/2] Length = 315 Score = 90.8 bits (224), Expect = 7e-17, Method: Composition-based stats. Identities = 31/183 (16%), Positives = 57/183 (31%), Gaps = 32/183 (17%) Query: 1 MFDPREK-IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 M + + A+ ID N+ S K + + Y Sbjct: 1 MIEEEKNQFAVLIDADNI--SPKYAPIIF------QELEAYGFPSCRRIYGNWSKANG-- 50 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLV 117 W + ++F+ G K++ D+ + +DA + + ++ Sbjct: 51 ---------WNEELLLEYSIIPVQQFSYTSG----KNATDMAMVIDAMDLLYGKKVDGFC 97 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 I + D FT L L+ + V + L R + F+ L L E R Sbjct: 98 IVTSDSDFTRLAMRLREEHMYVIGMGESK-----TPVALTRACNKFIHL-NLIYEADRGK 151 Query: 178 DED 180 +ED Sbjct: 152 EED 154 >gi|313904540|ref|ZP_07837916.1| protein of unknown function DUF88 [Eubacterium cellulosolvens 6] gi|313470682|gb|EFR66008.1| protein of unknown function DUF88 [Eubacterium cellulosolvens 6] Length = 283 Score = 90.8 bits (224), Expect = 7e-17, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 56/176 (31%), Gaps = 29/176 (16%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + + A+ ID N+ + + +L + I Y + Sbjct: 1 MENELRYAVLIDADNV--------SEKYIKIILDETANSGIATYKRIYGDWTSARMASWK 52 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIF 119 + ++++ G K++ D + +DA + S ++ I Sbjct: 53 KVLLDNS----------IIPIQQYSYTTG----KNATDSAMIIDAMDILYSNTVDGFCIV 98 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 S D FT LVA L+ KV + + S + F L L ++ + Sbjct: 99 SSDSDFTRLVARLREAGHKVIGMGESKTPQPFIS-----ACNQFKYLDMLYDQRQQ 149 >gi|167766019|ref|ZP_02438072.1| hypothetical protein CLOSS21_00511 [Clostridium sp. SS2/1] gi|317499424|ref|ZP_07957691.1| hypothetical protein HMPREF0996_02675 [Lachnospiraceae bacterium 5_1_63FAA] gi|167712099|gb|EDS22678.1| hypothetical protein CLOSS21_00511 [Clostridium sp. SS2/1] gi|316893296|gb|EFV15511.1| hypothetical protein HMPREF0996_02675 [Lachnospiraceae bacterium 5_1_63FAA] Length = 319 Score = 90.8 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 31/183 (16%), Positives = 57/183 (31%), Gaps = 32/183 (17%) Query: 1 MFDPREK-IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 M + + A+ ID N+ S K + + Y Sbjct: 5 MIEEEKNQFAVLIDADNI--SPKYAPIIF------QELEAYGFPSCRRIYGNWSKANG-- 54 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLV 117 W + ++F+ G K++ D+ + +DA + + ++ Sbjct: 55 ---------WNEELLLEYSIIPVQQFSYTSG----KNATDMAMVIDAMDLLYGKKVDGFC 101 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 I + D FT L L+ + V + L R + F+ L L E R Sbjct: 102 IVTSDSDFTRLAMRLREEHMYVIGMGESK-----TPVALTRACNKFIHL-NLIYEADRGK 155 Query: 178 DED 180 +ED Sbjct: 156 EED 158 >gi|134298416|ref|YP_001111912.1| hypothetical protein Dred_0543 [Desulfotomaculum reducens MI-1] gi|134051116|gb|ABO49087.1| protein of unknown function DUF88 [Desulfotomaculum reducens MI-1] Length = 180 Score = 90.8 bits (224), Expect = 8e-17, Method: Composition-based stats. Identities = 35/174 (20%), Positives = 65/174 (37%), Gaps = 16/174 (9%) Query: 5 REKIALFIDGANLYASSKAL----GFDIDYRKLLKAFRSR--AIVIRAYYYTTVVGDPEQ 58 +++ +FIDG N + L IDY KL + + R YYYT + +Q Sbjct: 1 MKRVMVFIDGNNFEKAVTNLYSGSQQRIDYSKLANYLAGKRNGNLQRLYYYTAASNNDKQ 60 Query: 59 QFSPLHPLLDWLHYNGFQVVAK----VAKEFTENCGRKRVKSSMDVELAVDAFEQS--EG 112 + + +D L+ +AK + + DV +AVD + Sbjct: 61 KAASTKNFVDTLNKQVPNCIAKIGYLQVVGKDASGQDIYTEKGTDVNIAVDLVSLAFFNA 120 Query: 113 LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 + ++ S D + V +++ K V ++ V + L+ D + L Sbjct: 121 YDEAILLSADTDYEPAVNMVRQFGKTV-VLGIVDRQK---AGYLKGLCDDHISL 170 >gi|256826985|ref|YP_003150944.1| hypothetical protein Ccur_05410 [Cryptobacterium curtum DSM 15641] gi|256583128|gb|ACU94262.1| Protein of unknown function DUF88 [Cryptobacterium curtum DSM 15641] Length = 312 Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 53/175 (30%), Gaps = 30/175 (17%) Query: 1 MFDPREK--IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58 M D E+ AL ID N+ S+K + ++ + V Y Sbjct: 1 MPDQTERKPFALLIDSDNV--SAKYIQGIMN-----ELTSRHGQVTYRRIYGDWTSSQMG 53 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHL 116 ++ ++F G K++ D L +DA + +E Sbjct: 54 KWK----------DVLADYSLTPMQQFPNTKG----KNATDSFLIIDAMDILYEGKIEGF 99 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 I S DG FT L + L+ V + R F L L + Sbjct: 100 CIVSSDGDFTRLASRLRDAGMTVVGMGEQK-----TPRSFRSACTVFTGLELLID 149 >gi|260428850|ref|ZP_05782827.1| conserved hypothetical protein [Citreicella sp. SE45] gi|260419473|gb|EEX12726.1| conserved hypothetical protein [Citreicella sp. SE45] Length = 236 Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 47/171 (27%), Gaps = 29/171 (16%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M +A+ ID N S K D S Y + Sbjct: 1 MPSENRLLAILIDADN--TSPKYAKAIFD------EIASLGEASVRRVYGDFSSQQMAGW 52 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVI 118 S + + + K++ D+ L +DA + + V+ Sbjct: 53 SKITA----------EYGLVPL----HSPANTVGKNASDISLVIDAMDLMHTARFDGFVL 98 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 S D FT L + ++ + + D R+ F+ L L Sbjct: 99 VSSDSDFTRLASRIREQGLDAYGMGMQK-----TPDAFRKACKRFIFLENL 144 >gi|332524909|ref|ZP_08401095.1| hypothetical protein RBXJA2T_03833 [Rubrivivax benzoatilyticus JA2] gi|332108204|gb|EGJ09428.1| hypothetical protein RBXJA2T_03833 [Rubrivivax benzoatilyticus JA2] Length = 263 Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 52/171 (30%), Gaps = 34/171 (19%) Query: 1 MFDPRE----KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP 56 M + ++ ++A+ +D N L+ V+ Y Sbjct: 1 MSEKKDAGEGRVAVLVDCDNTTPEVLEHA--------LRVVAQFGRVVLRRGYGN----- 47 Query: 57 EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLE 114 L + ++ ++ G K++ D+ LA+DA E + Sbjct: 48 ------HTTLANRWQDALVRLAFTPCLQYQYAAG----KNTSDIALALDAIEALFDRRAD 97 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165 + + D F L L+ + V IV LR +D F + Sbjct: 98 TFCLVTSDSDFAYLCRKLRERGATVHIVGESK-----TPAALRNASDQFFE 143 >gi|261402330|ref|YP_003246554.1| protein of unknown function DUF88 [Methanocaldococcus vulcanius M7] gi|261369323|gb|ACX72072.1| protein of unknown function DUF88 [Methanocaldococcus vulcanius M7] Length = 216 Score = 90.1 bits (222), Expect = 1e-16, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 58/164 (35%), Gaps = 32/164 (19%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 +IAL IDG N+ F+ID K+ + ++ Y L Sbjct: 38 RIALLIDGPNM----LRKEFNIDLDKIREVLNEFGDIVIGRVYLN--------QYASDKL 85 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124 ++ + GF+ +DVE+AVDA E ++ + + D Sbjct: 86 IEAVINQGFEPKI--------------SAGDVDVEMAVDATELVFNPNIDTIAYVTRDAD 131 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F + + + KKV ++ S L+ ADY + + Sbjct: 132 FLPAIRKAKERGKKVIVIGAEPGF----STALQNIADYVIKIGE 171 >gi|289193218|ref|YP_003459159.1| protein of unknown function DUF88 [Methanocaldococcus sp. FS406-22] gi|288939668|gb|ADC70423.1| protein of unknown function DUF88 [Methanocaldococcus sp. FS406-22] Length = 202 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 58/164 (35%), Gaps = 32/164 (19%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 +IAL IDG N+ F+ID K+ + ++ Y L Sbjct: 24 RIALLIDGPNM----LRKEFNIDLDKIREVLSEFGDIVIGRVYLN--------QYASDKL 71 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124 ++ + GF+ +DVE+AVDA E ++ + + D Sbjct: 72 IEAVINQGFEPKI--------------SAGDVDVEMAVDATELVFNPNIDTIAYVTRDAD 117 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F + + + KKV ++ S L+ ADY + + Sbjct: 118 FLPAIRKAKERGKKVIVIGAEPGF----STALQNIADYVIKIGE 157 >gi|171060518|ref|YP_001792867.1| hypothetical protein Lcho_3848 [Leptothrix cholodnii SP-6] gi|170777963|gb|ACB36102.1| protein of unknown function DUF88 [Leptothrix cholodnii SP-6] Length = 461 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 68/188 (36%), Gaps = 26/188 (13%) Query: 7 KIALFIDGANLYASSKAL------GFDIDYRKLLKAFRSR----AIVIRAYYYTTVVGDP 56 K ALF+D N+Y+ + L F + ++ +V Sbjct: 2 KSALFVDFDNVYSGLRKLDPTIADRFSRQPLRWVEWLLDDLPPPEHAPDGARRRLLVRRV 61 Query: 57 EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG---L 113 ++ GF+++ A K+S D+ + +D + + Sbjct: 62 YLNPQVYQRYRAAFNHAGFEIIDCPAM-------TSEGKTSTDIHMVLDMVDLLQHQVHY 114 Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA-YLKNE 172 + ++FS D FT ++ L+R ++ T+++ S R AD +D +L++ Sbjct: 115 DEFIVFSADADFTPVLRKLRRWDRRTTVLAVGFP-----SAAYRASADLLIDTDLFLRDA 169 Query: 173 IARDPDED 180 I ED Sbjct: 170 IGVREAED 177 >gi|113869183|ref|YP_727672.1| hypothetical protein H16_A3229 [Ralstonia eutropha H16] gi|113527959|emb|CAJ94304.1| conserved hypothetical protein [Ralstonia eutropha H16] Length = 265 Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats. Identities = 30/161 (18%), Positives = 53/161 (32%), Gaps = 30/161 (18%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 ++A+ +D N +DY L+ V+ Y Q + Sbjct: 11 RVAVLVDCDN------TTPEILDYA--LRVVAQFGRVVLRRGYGN-------QSTLGKTW 55 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124 + L F ++ G K++ D+ LA+DA E + + + D Sbjct: 56 QEALVRQAFT----PCLQYQYAAG----KNTADIALALDALEAMFDHRADKFCLVTSDSD 107 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165 F L L+ + V IV + LR +D F + Sbjct: 108 FAYLCRKLRERGATVCIVGESK-----TPEALRNASDQFFE 143 >gi|323698514|ref|ZP_08110426.1| hypothetical protein DND132_1098 [Desulfovibrio sp. ND132] gi|323458446|gb|EGB14311.1| hypothetical protein DND132_1098 [Desulfovibrio desulfuricans ND132] Length = 241 Score = 88.9 bits (219), Expect = 3e-16, Method: Composition-based stats. Identities = 26/178 (14%), Positives = 53/178 (29%), Gaps = 29/178 (16%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 + IALFID N A I++ +L + Y + + + Sbjct: 7 EQHIALFIDADN------APAKFIEF--ILTDLAKYGSLAIRRAYGNWKNEYLKGW---- 54 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLE--HLVIFSGD 122 F + ++F + K++ D+ + +DA + + + S D Sbjct: 55 ------EECLFDKAIQPVQQFD----MTKGKNATDMAMTIDAMDILYQKDIGVFGLVSSD 104 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 F L L+ + K V + + + F L + + Sbjct: 105 CDFAPLATRLRAEGKTVVGYGSRQTPEAFT-----NACSTFSYLDDKPQDQPEAQPKP 157 >gi|163746469|ref|ZP_02153827.1| hypothetical protein OIHEL45_13730 [Oceanibulbus indolifex HEL-45] gi|161380354|gb|EDQ04765.1| hypothetical protein OIHEL45_13730 [Oceanibulbus indolifex HEL-45] Length = 232 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 55/164 (33%), Gaps = 29/164 (17%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +A+ ID N+ +K G +++ + Y D + + Sbjct: 9 LAVLIDADNVP--AKHAG------AIMREVTTIGEPALRRVYGDWSNDHLKGWKAPIR-- 58 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDGCF 125 ++ +E G K++ D+ L + A + S + +VI S D F Sbjct: 59 --------ELGLVAHQETANTKG----KNASDIGLVIQAMDILHSRRFDIIVIVSSDSDF 106 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 T LV L+ V + D LR + F+ + L Sbjct: 107 TALVNRLREDGVTVIGIGEKK-----THDSLRNVYNRFILIENL 145 >gi|296109488|ref|YP_003616437.1| protein of unknown function DUF88 [Methanocaldococcus infernus ME] gi|295434302|gb|ADG13473.1| protein of unknown function DUF88 [Methanocaldococcus infernus ME] Length = 173 Score = 88.5 bits (218), Expect = 3e-16, Method: Composition-based stats. Identities = 34/163 (20%), Positives = 59/163 (36%), Gaps = 32/163 (19%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 KIAL IDG N+ F+ID K+ + ++ Y L Sbjct: 24 KIALLIDGPNM----LRKEFNIDLDKIREILSEFGDIVIGRVYLN--------QYASEKL 71 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124 ++ + GF+ +DVE+AVDA E ++ + + D Sbjct: 72 IEAVINQGFEPKI--------------SAGDVDVEMAVDATELVFNPNIDTIAYVTRDAD 117 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F + + K KK+ ++ S L++ ADY + + Sbjct: 118 FLPAIRKAKEKGKKIIVIGAEPGF----SKALQKIADYVIKIN 156 >gi|206896404|ref|YP_002247532.1| hypothetical protein COPRO5265_1226 [Coprothermobacter proteolyticus DSM 5265] gi|206739021|gb|ACI18099.1| protein of unknown function [Coprothermobacter proteolyticus DSM 5265] Length = 321 Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 42/175 (24%), Positives = 72/175 (41%), Gaps = 22/175 (12%) Query: 2 FDPREKIALFIDGANLYASSKALGFDID--YRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 P + A+F+D NL S + +K+L F S + A YT Sbjct: 1 MQPCKHFAIFLDLENLAKSLEKYDKTPQELLQKILDTFVSMGKIDVARVYTG-------- 52 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHL 116 + L+ + G++VV + G VK+ D+++ VDA + + ++ Sbjct: 53 WGVFASLIPFAVDMGYEVVF----VYAHRSG-SVVKNMADMQITVDALKLGYERDSIDAF 107 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 V S D F ++ ALQ K+V ++ D + S+ L+ AD F+ L L Sbjct: 108 VFVSADRDFIPVIKALQGLGKEVVVI----GDEQITSEALKNTADAFVSLNELAG 158 >gi|150003300|ref|YP_001298044.1| hypothetical protein BVU_0716 [Bacteroides vulgatus ATCC 8482] gi|160890159|ref|ZP_02071162.1| hypothetical protein BACUNI_02599 [Bacteroides uniformis ATCC 8492] gi|149931724|gb|ABR38422.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482] gi|156860547|gb|EDO53978.1| hypothetical protein BACUNI_02599 [Bacteroides uniformis ATCC 8492] Length = 240 Score = 88.5 bits (218), Expect = 4e-16, Method: Composition-based stats. Identities = 24/162 (14%), Positives = 46/162 (28%), Gaps = 29/162 (17%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 IA+ IDG N+ ++ + Y L Sbjct: 11 IAVLIDGDNVSFER--------MEDIMGFVSRYGDAVIRRIYGDWT------RKALSGWK 56 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCF 125 + GF++V + K++ D+ L +DA + ++ + + DG + Sbjct: 57 ETAREYGFRLV--------QASSYASGKNTTDIALVIDAMDILRDGRVDCFCLVASDGDY 108 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 L ++ KV L R F+ Sbjct: 109 NPLAQRIREAGLKVLGYGEGK-----TPVSLIRSCSVFLYAD 145 >gi|226226060|ref|YP_002760166.1| hypothetical protein GAU_0654 [Gemmatimonas aurantiaca T-27] gi|226089251|dbj|BAH37696.1| hypothetical protein [Gemmatimonas aurantiaca T-27] Length = 728 Score = 88.2 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 59/176 (33%), Gaps = 23/176 (13%) Query: 10 LFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDW 69 L ID N+ ++ + + LL + + V Y + + Sbjct: 17 LLIDFDNVTMGIRS-DLQEELKNLLSSDIVKGKVAVRRAYA--------DWRRYPQYIVP 67 Query: 70 LHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGCFT 126 L ++ A K++ D+ LA+DA E + V+ SGD F+ Sbjct: 68 LTEASIDLIFAPA-------YGSSKKNATDIRLAIDALELVFTRPEIGTFVLLSGDSDFS 120 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182 ++V L+ K V V +SD L D + L + DE + Sbjct: 121 SMVIKLKEYGKYVIGVGI----RESSSDLLVMNCDEYYSYNALAGLVKTGEDETTR 172 >gi|255012325|ref|ZP_05284451.1| hypothetical protein B2_00320 [Bacteroides sp. 2_1_7] Length = 240 Score = 88.2 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 24/162 (14%), Positives = 46/162 (28%), Gaps = 29/162 (17%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 IA+ IDG N+ ++ + Y L Sbjct: 11 IAVLIDGDNVSFER--------MEDIMGFVSRYGDAVIRRIYGDWT------RKALSGWK 56 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCF 125 + GF++V + K++ D+ L +DA + ++ + + DG + Sbjct: 57 ETAREYGFRLV--------QASSYASGKNTTDIALVIDAMDILRDGRVDCFCLVASDGDY 108 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 L ++ KV L R F+ Sbjct: 109 NPLAQRIREAGLKVLGYGEGK-----TPVSLIRSCSVFLYAD 145 >gi|282899804|ref|ZP_06307766.1| hypothetical protein CRC_01671 [Cylindrospermopsis raciborskii CS-505] gi|281195286|gb|EFA70221.1| hypothetical protein CRC_01671 [Cylindrospermopsis raciborskii CS-505] Length = 439 Score = 88.2 bits (217), Expect = 4e-16, Method: Composition-based stats. Identities = 38/164 (23%), Positives = 63/164 (38%), Gaps = 15/164 (9%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRA-YYYTTVVGDPEQQFSPLHPL 66 A+F D NL +K F D+ K L + ++ + +S Sbjct: 6 TAIFYDIENL---TKGYSFSKDFIKELSLKQIYRQILEVDIVNKICLQRAYANWSDHR-- 60 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDG 123 L L ++ + F R K++ D++L VD + + +E VI SGDG Sbjct: 61 LSLLRGEINELGIDPIQIF--GFARYHKKNAADIQLVVDTMDITIRFPHIEVYVIVSGDG 118 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F +L L K+V + + A+D + DYF+ L Sbjct: 119 GFASLAKKLHEYGKQVIGCA----YENSANDIFKSVCDYFIKLE 158 >gi|163845962|ref|YP_001634006.1| hypothetical protein Caur_0367 [Chloroflexus aurantiacus J-10-fl] gi|222523687|ref|YP_002568157.1| hypothetical protein Chy400_0393 [Chloroflexus sp. Y-400-fl] gi|163667251|gb|ABY33617.1| protein of unknown function DUF88 [Chloroflexus aurantiacus J-10-fl] gi|222447566|gb|ACM51832.1| protein of unknown function DUF88 [Chloroflexus sp. Y-400-fl] Length = 208 Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 32/179 (17%), Positives = 66/179 (36%), Gaps = 16/179 (8%) Query: 7 KIALFIDGANL------YASSKALGF--DIDYRKLLKAF---RSRAIVIRAYYYTTVVGD 55 +I +F DG+ + S K +G+ + + +L++ F + + Y + Sbjct: 6 RIGVFYDGSYFTYAQFYFYSEKKVGWLSFVPFHRLIEQFVSSKEQRYAAHRVVYASWHQG 65 Query: 56 PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGL 113 +V + + +DV LA+DA E++ + Sbjct: 66 LFHSAQTSEKQFQIERNRHIDLVHAGIEPKYVPMPPNGQEKGVDVSLAIDAMERAMEGKI 125 Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMAS---DQLRRQADYFMDLAYL 169 + V+ +GDG T LV AL + +V ++ S +L +Y +++ L Sbjct: 126 DVAVLVTGDGDLTPLVRALMKHGVRVGLLYFEYESSQRTSHVNRRLLDACNYALNVNQL 184 >gi|217968493|ref|YP_002353727.1| hypothetical protein Tmz1t_0028 [Thauera sp. MZ1T] gi|217505820|gb|ACK52831.1| protein of unknown function DUF88 [Thauera sp. MZ1T] Length = 509 Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 31/173 (17%), Positives = 64/173 (36%), Gaps = 23/173 (13%) Query: 7 KIALFIDGANLYASSKALGFDI------DYRKLLKAFRSRAIVI----RAYYYTTVVGDP 56 K ALF+D N+Y+ + L I + + S+ + +V Sbjct: 2 KSALFVDFDNVYSGLRKLDQAIADRFARQPLEWMHWIISKLELPDHSPEGARRRVLVRRC 61 Query: 57 EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG---L 113 + GF+++ A K+S D+ + +D + + Sbjct: 62 YLNPQAYQRFRPSFNLAGFEIIDCPAL-------TSEGKTSTDIHMVLDIIDLLQHETHY 114 Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTI--VSTVLSDPSMASDQLRRQADYFM 164 + ++FS D FT ++ L+R ++ T+ + + ++D L Q D F+ Sbjct: 115 DEFIVFSADADFTPVLRKLRRWDRRTTVLAIGFPSAAYRASADLLIDQ-DEFV 166 >gi|85708688|ref|ZP_01039754.1| hypothetical protein NAP1_05595 [Erythrobacter sp. NAP1] gi|85690222|gb|EAQ30225.1| hypothetical protein NAP1_05595 [Erythrobacter sp. NAP1] Length = 240 Score = 88.2 bits (217), Expect = 5e-16, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 53/166 (31%), Gaps = 29/166 (17%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 + IAL ID N ID +L V Y D ++ + Sbjct: 7 KNIALLIDADN------TTPEGIDP--VLTVMAELGQVNIRRAYGNFAKDNLARWDKITN 58 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDG 123 + + ++F + G K++ D+ + +DA + ++ I + D Sbjct: 59 ----------RFGIRPQQQFDVSKG----KNATDMAMTIDAIDLLYQGKVDGFGIMTSDS 104 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 FT LV L++ V + F+D+ L Sbjct: 105 DFTPLVTRLRQDGIIVYGFGEAK-----TPQAFKSVCTRFIDIKQL 145 >gi|22299967|ref|NP_683214.1| hypothetical protein tll2424 [Thermosynechococcus elongatus BP-1] gi|22296152|dbj|BAC09976.1| tll2424 [Thermosynechococcus elongatus BP-1] Length = 620 Score = 87.8 bits (216), Expect = 5e-16, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 67/182 (36%), Gaps = 13/182 (7%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 K A+ D NL + G +D K+ S ++ + T +G+ + + Sbjct: 157 NTLKTAVLYDIENLVFNQ---GQRLDPAKV-NELVSLDKILESIKSTIDLGEIAIKRAYG 212 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGL---EHLVIFS 120 + L Q+ + + + +++ D++LA+DA + V+ S Sbjct: 213 NWQNKTLQALNDQLKRSQIQPVSVYGHNRDQRNAADIQLALDAIDLIHHYPDINTFVLIS 272 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 GDG F ++ L+ K V + + AS ++ F+ L I P + Sbjct: 273 GDGGFGSIALRLRDYGKTVIGCA----YWNAASLSFQKVCHQFIFLEN--PFIDSPPTTN 326 Query: 181 KK 182 + Sbjct: 327 GR 328 >gi|219850648|ref|YP_002465081.1| hypothetical protein Cagg_3809 [Chloroflexus aggregans DSM 9485] gi|219544907|gb|ACL26645.1| protein of unknown function DUF88 [Chloroflexus aggregans DSM 9485] Length = 319 Score = 87.4 bits (215), Expect = 8e-16, Method: Composition-based stats. Identities = 37/186 (19%), Positives = 70/186 (37%), Gaps = 31/186 (16%) Query: 4 PREKI------ALFIDGANLYASSKALGF------DIDYRKLLKAFRSRAIVIRAYYYTT 51 P E+ A+F D NL K GF ++ +++L A R + Sbjct: 14 PMERTPMPFNTAIFYDIENL---IKGYGFSTQTITNVSLKEILTALRQTGKIGHIAVQRA 70 Query: 52 VVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS- 110 + + + ++ ++ + F R+ +++ DV+LA+DA + + Sbjct: 71 YANWSDPRLGVMRDEIN-------ELGIDPIQVF--GFAREPKRNAADVQLAIDAIDLAY 121 Query: 111 --EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 GL+ VI SGDG F L L K V + S + + D F+ + Sbjct: 122 IRPGLDVFVIVSGDGGFAALAKKLHEYGKTVIGCA----YRSAVNKTFQAVCDEFVWITD 177 Query: 169 LKNEIA 174 + ++ Sbjct: 178 TEEKVQ 183 >gi|221070110|ref|ZP_03546215.1| protein of unknown function DUF88 [Comamonas testosteroni KF-1] gi|220715133|gb|EED70501.1| protein of unknown function DUF88 [Comamonas testosteroni KF-1] Length = 157 Score = 87.4 bits (215), Expect = 9e-16, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 50/174 (28%), Gaps = 34/174 (19%) Query: 1 MFDP---REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M +P ++A+ ID N+ + A +L+ R Y Sbjct: 1 MQNPFITAPRLAVLIDAENISPAWSA--------QLMAQVAERGAATIRRAYADWTSPYL 52 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE----GL 113 + + + ++F R K++ D L +DA E + Sbjct: 53 ASWKKPLN----------ALAIRPCQQFNY----TRRKNATDSALIMDAMELLHARERRV 98 Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 + I S D +T L ++ + + + FM L Sbjct: 99 DGFCIVSSDSDYTGLAGRIREQGLLIYGYG-----KQDTAASFVAACHAFMFLD 147 >gi|229541784|ref|ZP_04430844.1| protein of unknown function DUF88 [Bacillus coagulans 36D1] gi|229326204|gb|EEN91879.1| protein of unknown function DUF88 [Bacillus coagulans 36D1] Length = 179 Score = 87.0 bits (214), Expect = 9e-16, Method: Composition-based stats. Identities = 37/173 (21%), Positives = 69/173 (39%), Gaps = 15/173 (8%) Query: 5 REKIALFIDGANLYASSKAL---GFDIDYRKLLKA--FRSRAIVIRAYYYTTVVGDPEQQ 59 +++ +FIDG N A+ AL +DY KL + R I+ R YYYT V +++ Sbjct: 1 MKRVMVFIDGNNFEAALTALYGSQQRLDYLKLAEYVAARRDGILQRIYYYTAVGSLDKEK 60 Query: 60 FSPLHPLLDWLHYNGFQVVAKV----AKEFTENCGRKRVKSSMDVELAVDAFEQSEG--L 113 + +D L+ + +AK+ + DV +AVD + Sbjct: 61 AAATKLFIDHLNKKVPKCIAKLGYLSVVGINALGKPIFTEKGTDVNIAVDLVSLAFNNGY 120 Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 + ++FS D + + + K V + V + ++ D ++ L Sbjct: 121 DEAILFSADTDYEAAIKMARSLGKNV-VAGVVDQQK---AGYMKDLCDEYITL 169 >gi|257456927|ref|ZP_05622108.1| conserved hypothetical protein [Treponema vincentii ATCC 35580] gi|257445636|gb|EEV20698.1| conserved hypothetical protein [Treponema vincentii ATCC 35580] Length = 311 Score = 87.0 bits (214), Expect = 9e-16, Method: Composition-based stats. Identities = 23/169 (13%), Positives = 47/169 (27%), Gaps = 34/169 (20%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 K L IDG N+ S ++ ++ Y + Sbjct: 2 DRKYVLLIDGDNIPPSF--------LEAIITEVSKEGELLIKRLYGDWTTPNMNGWKNWL 53 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG---LEHLVIFSG 121 ++ + ++F ++ D + +DA E + + + I S Sbjct: 54 E----------KIPIRPVQQFRNGP------NATDNTIIMDAIELANTNKSINAVCIVST 97 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL-RRQADYFMDLAYL 169 D + +L L+ V + + L + F L L Sbjct: 98 DSDYYSLALKLREYGLYVLGIG------KQTAKALWVNACNEFKYLENL 140 >gi|126655888|ref|ZP_01727327.1| hypothetical protein CY0110_19792 [Cyanothece sp. CCY0110] gi|126623367|gb|EAZ94072.1| hypothetical protein CY0110_19792 [Cyanothece sp. CCY0110] Length = 103 Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats. Identities = 34/104 (32%), Positives = 58/104 (55%), Gaps = 5/104 (4%) Query: 73 NGFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAA 131 G+ V K+ KE+ + GR K+++D+E+ VD F E + +++FSGDG F + Sbjct: 1 MGYTVRTKILKEYYDDTSGRYSQKANLDIEIVVDMFNTVEQYDRVILFSGDGDFERAIEL 60 Query: 132 LQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 L+ K +T+VST M + +LR D ++DL +K+ I + Sbjct: 61 LRSKNTHITVVST----EGMIARELRNATDRYIDLNDIKDSIEK 100 >gi|228473827|ref|ZP_04058569.1| conserved hypothetical protein [Capnocytophaga gingivalis ATCC 33624] gi|228274668|gb|EEK13502.1| conserved hypothetical protein [Capnocytophaga gingivalis ATCC 33624] Length = 211 Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 45/166 (27%), Gaps = 30/166 (18%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 +KIA+ ID N A + ++ + I + + + Sbjct: 5 KKIAVLIDADNAQAEYLSES--------IEEVKLYGDPILKWAFGDWTTPQLSSWKQYMA 56 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGL---EHLVIFSGD 122 K + F + G K+S D+ L + A E I S D Sbjct: 57 ----------SFAIKPLQSFAHSKG----KNSTDISLVISAMEILYNYPYISGFCILSSD 102 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 FT LV L+ K V + + F Sbjct: 103 SDFTELVVKLKENNKFVLGIG-----KRQTPPAFVKACHKFKYTDD 143 >gi|312620998|ref|YP_003993726.1| protein of unknown function duf88 [Photobacterium damselae subsp. damselae] gi|311872719|emb|CBX86813.1| protein of unknown function DUF88 [Photobacterium damselae subsp. damselae] Length = 222 Score = 85.8 bits (211), Expect = 2e-15, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 56/161 (34%), Gaps = 29/161 (18%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 IALF+D N +S ++ +++ R + + Y + Sbjct: 9 IALFVDADNTSSS--------NFTFVIEQLLKRGQIHYRHLYGNWTKPCLSSW------- 53 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDGCF 125 +V A +F + K++ D+ + VD E QS + I + D F Sbjct: 54 -------HEVGQLHAAQFIQVFDLCSHKNASDIAMVVDILEWNQSHPNHVIAIMTSDSDF 106 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 T L+ L+R + + S L++ F+ + Sbjct: 107 TPLLNQLRRHQITTIGIG-----NANCSIHLQKSFSSFIPI 142 >gi|269105290|ref|ZP_06157980.1| protein of unknown function DUF88 [Photobacterium damselae subsp. damselae CIP 102761] gi|268160490|gb|EEZ38993.1| protein of unknown function DUF88 [Photobacterium damselae subsp. damselae CIP 102761] Length = 222 Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 62/176 (35%), Gaps = 32/176 (18%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 IALF+D N S ++ +++ R + + Y + Sbjct: 9 IALFVDADNTSPS--------NFTFVIEQLLKRGQIHYRHIYGNWTKPCLSSW------- 53 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDGCF 125 +V A +F + K++ D+ + VD E QS + I + D F Sbjct: 54 -------HEVGQLHAAQFIQVFDLCSHKNASDIAMVVDILEWNQSHPNHVIAIMTSDSDF 106 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 T L+ L+R + + S L++ F+ + +K I+ P + K Sbjct: 107 TPLLNQLRRHQITTIGIG-----NANCSIHLQKSFSTFIPI-PVKETIS--PTKPK 154 >gi|262198573|ref|YP_003269782.1| hypothetical protein Hoch_5405 [Haliangium ochraceum DSM 14365] gi|262081920|gb|ACY17889.1| protein of unknown function DUF88 [Haliangium ochraceum DSM 14365] Length = 450 Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 37/193 (19%), Positives = 57/193 (29%), Gaps = 27/193 (13%) Query: 1 MFDPREKIALFIDGANLYASS-------KALGFDIDYRKLLKAFRSRA-------IVIRA 46 M + AL ID N Y S D+ + L+ A +I Sbjct: 10 MTIMSQHAALLIDLENFYLSRENGTLSEARGEVHYDFHRDLEILCRGAQRIAGDKRLIVR 69 Query: 47 YYYTTV----VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVEL 102 Y D + L + + + F G K++ D+ L Sbjct: 70 RAYADFNAYRRSDDSARPYRKDYYLRHTPKLLMERGVEPVQVFRFPGGGN--KNAADMRL 127 Query: 103 AVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQ 159 A+DA ++ ++ +GD F L L+R V + S L R Sbjct: 128 AMDATTLMAPPSCVDTFILVTGDADFIRLTLELRRCGAFVAGI----GVRETTSSVLPRY 183 Query: 160 ADYFMDLAYLKNE 172 D F L E Sbjct: 184 CDRFDYFTDLAGE 196 >gi|158336589|ref|YP_001517763.1| hypothetical protein AM1_3453 [Acaryochloris marina MBIC11017] gi|158306830|gb|ABW28447.1| conserved domain protein [Acaryochloris marina MBIC11017] Length = 459 Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 41/178 (23%), Positives = 78/178 (43%), Gaps = 27/178 (15%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +A+F D N+ +++ + + L++ +S+ Y+ + E L+ Sbjct: 95 VAVFWDYENVKIAAQGIQAPL-AESLVEYSQSQGHTRLKIVYSNWRREKES-------LV 146 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGC 124 L+ GF+ + ++++DV+L VD + + H +I +GD Sbjct: 147 QALYSLGFEPIHV----------STGKENAVDVKLTVDCLNTAYQYPDVGHFIIVTGDRD 196 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182 F LV AL+ K+VT++ +AS+QL AD F+DL L + + ED + Sbjct: 197 FVPLVNALKTLEKQVTLI----GRAEVASNQLLLSADEFIDLEKL--DTEKLDTEDTE 248 >gi|221640949|ref|YP_002527211.1| hypothetical protein RSKD131_2850 [Rhodobacter sphaeroides KD131] gi|221161730|gb|ACM02710.1| Hypothetical Protein RSKD131_2850 [Rhodobacter sphaeroides KD131] Length = 238 Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 25/173 (14%), Positives = 52/173 (30%), Gaps = 30/173 (17%) Query: 11 FIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWL 70 ID N+ A+ + + + Y L+ Sbjct: 2 LIDADNVPANY--------AEAIFEEIAALGEASVRRIYGDWSA----------MRLNAW 43 Query: 71 HYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDGCFTTL 128 + ++F+ G K++ D+ L + A + S + V+ S D FT L Sbjct: 44 AKKVAALGLVADQQFSNTKG----KNASDIGLVISAMDFLHSGLFDGFVLVSSDSDFTRL 99 Query: 129 VAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 A ++ + V + + R F+ + L ++ E + Sbjct: 100 AARIREQGLDVYGIGEKK-----TPEAFRMACKRFIYVENLGSD-EAPAREPR 146 >gi|150399127|ref|YP_001322894.1| hypothetical protein Mevan_0373 [Methanococcus vannielii SB] gi|150011830|gb|ABR54282.1| protein of unknown function DUF88 [Methanococcus vannielii SB] Length = 215 Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 34/182 (18%), Positives = 64/182 (35%), Gaps = 38/182 (20%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 K+AL IDG N+ F++D K+ A ++ Y L Sbjct: 22 KMALLIDGPNM----LRKEFNVDLDKVRDALDEFGDIVVGRVYLN--------QYASDKL 69 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124 ++ + GF+ +DVE+AVD E + ++ +V + D Sbjct: 70 IEAIANQGFEPRI--------------SAGDVDVEMAVDGTELIFNKNIDTIVYMTRDAD 115 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM------DLAYLKNEIARDPD 178 F + + + K++ +V S ++ AD+ + +L K E + Sbjct: 116 FLPAIRKAKERGKQIIVVGAEPGF----STAIQNIADHVIRVEEDFELDKEKLEQKKRDR 171 Query: 179 ED 180 E Sbjct: 172 EQ 173 >gi|332559892|ref|ZP_08414214.1| hypothetical protein RSWS8N_12555 [Rhodobacter sphaeroides WS8N] gi|332277604|gb|EGJ22919.1| hypothetical protein RSWS8N_12555 [Rhodobacter sphaeroides WS8N] Length = 265 Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 38/178 (21%), Positives = 65/178 (36%), Gaps = 38/178 (21%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +A+ ID NL S K + + A R V+RAY + Sbjct: 4 VAVLIDADNL--SGKHAAQIMQ----VAAALGRPTVLRAYVHAQRP-------------C 44 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCF 125 DW +GF++ K++ D+ LA+DA E + ++ VI S DG F Sbjct: 45 DWHGVHGFRL-----------MHAGTGKNASDLLLALDAVELALRGDVDQFVIASSDGDF 93 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK-NEIARDPDEDKK 182 + L L+ VT V R F+++ + + + P ++ + Sbjct: 94 SHLALRLREYGALVTGVGEDK-----TPQTFRAACADFVEIGARRLASVPKPPSKEAQ 146 >gi|239905768|ref|YP_002952507.1| hypothetical protein DMR_11300 [Desulfovibrio magneticus RS-1] gi|239795632|dbj|BAH74621.1| hypothetical protein [Desulfovibrio magneticus RS-1] Length = 199 Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 35/193 (18%), Positives = 64/193 (33%), Gaps = 29/193 (15%) Query: 11 FIDGANLYASSKALG--FDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68 ID +Y + IDY KL + + RAYY ++ + + + Sbjct: 8 LIDAGYMYRGQSYFSREYSIDYVKLRNKLEAETPIWRAYYLNSIPHPTPESQIAFYNWMR 67 Query: 69 WLHYNGFQVVAK---------------------VAKEFTENCGR--KRVKSSMDVELAVD 105 G +++ K + R + + +DV LA Sbjct: 68 SAPPQGPKIITKLYELRTSEINELYCEQCRRKVPVTCPNDRAHRLSREQQKGVDVGLATL 127 Query: 106 AFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165 A E + L++ SGD V + K K+ ++ S L+ +AD Sbjct: 128 ALTHIENYDTLILSSGDSDLLDAVEYITEKNKRFELLVFKNGV----STDLQCRADRIWW 183 Query: 166 LAYLKNEIARDPD 178 + +E+AR+ Sbjct: 184 IDEFAHEVAREAR 196 >gi|150402231|ref|YP_001329525.1| hypothetical protein MmarC7_0304 [Methanococcus maripaludis C7] gi|150033261|gb|ABR65374.1| protein of unknown function DUF88 [Methanococcus maripaludis C7] Length = 215 Score = 85.1 bits (209), Expect = 4e-15, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 64/181 (35%), Gaps = 38/181 (20%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 K+AL IDG N+ F++D K+ A ++ Y L Sbjct: 22 KMALLIDGPNM----LRKEFNVDLDKVRDALEQFGDIVVGRVYLN--------QYASDKL 69 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124 ++ + GF+ +DVE+AVD E + L+ LV + D Sbjct: 70 IEAIANQGFEPRI--------------SAGDVDVEMAVDGTELIFNKNLDTLVYMTRDAD 115 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM------DLAYLKNEIARDPD 178 F + + + K++ +V S ++ AD+ + +L K E + Sbjct: 116 FLPAIRKAKERGKQIIVVGAEPGF----STAIQNIADHVIRVEEDFELDKEKLEQKKRER 171 Query: 179 E 179 E Sbjct: 172 E 172 >gi|218128838|ref|ZP_03457642.1| hypothetical protein BACEGG_00410 [Bacteroides eggerthii DSM 20697] gi|217989066|gb|EEC55382.1| hypothetical protein BACEGG_00410 [Bacteroides eggerthii DSM 20697] Length = 234 Score = 84.7 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 23/162 (14%), Positives = 47/162 (29%), Gaps = 29/162 (17%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +A+ IDG N ++ + Y L Sbjct: 11 VAVLIDGDNASFER--------MEDIMGFVSRYGDAVVRRIYGDWT------RKALSAWK 56 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCF 125 + +GF++V + K++ D+ L +DA + ++ + + DG + Sbjct: 57 ESAREHGFRLV--------QASSHVPGKNTTDIALVIDAMDILRDGQVDCFCLVASDGDY 108 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 + L ++ KV L R F+ Sbjct: 109 SLLAQRIREAGVKVLGYGEGK-----TPVSLVRSCSVFLYAD 145 >gi|118470413|ref|YP_885602.1| hypothetical protein MSMEG_1210 [Mycobacterium smegmatis str. MC2 155] gi|118171700|gb|ABK72596.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length = 289 Score = 84.7 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 36/194 (18%), Positives = 59/194 (30%), Gaps = 42/194 (21%) Query: 1 MFDPRE-KIALFIDGANLYASS---------------------KALGFDIDYRKLLKAFR 38 M +P ++A+++D N+ S K + +D +L Sbjct: 1 MTEPAPTRVAVYLDFDNIVISRYDQVNGRNSFQKDKAKGLEADKLIKATVDVGAILDFAS 60 Query: 39 SRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSM 98 S ++ Y D + G V K+ Sbjct: 61 SFGTLVLTRAYADWSADVNAGYRQQL--------VGRAVDLVQL-----FPAAAYGKNGA 107 Query: 99 DVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQ 155 D+ LAVDA E L H+VI +GD + L +R + V + +S Sbjct: 108 DIRLAVDAVEDMFRLPDLTHVVIVAGDSDYIPLAQRCKRLGRYVVGI----GVAGASSRA 163 Query: 156 LRRQADYFMDLAYL 169 L D F+ L Sbjct: 164 LAAACDEFIIYDAL 177 >gi|42528036|ref|NP_973134.1| hypothetical protein TDE2536 [Treponema denticola ATCC 35405] gi|41819081|gb|AAS13053.1| conserved hypothetical protein [Treponema denticola ATCC 35405] gi|325474748|gb|EGC77934.1| hypothetical protein HMPREF9353_00781 [Treponema denticola F0402] Length = 313 Score = 84.3 bits (207), Expect = 6e-15, Method: Composition-based stats. Identities = 29/183 (15%), Positives = 53/183 (28%), Gaps = 34/183 (18%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +K A+ IDG N+ S ++ V+ Y + P Sbjct: 2 EKKYAILIDGDNIAPSY--------LDSIISEVSKEGEVLIKRLYGDWTTPNMNGWKPWL 53 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG---LEHLVIFSG 121 +V + ++F ++ D + +DA E + + + I S Sbjct: 54 E----------KVPIRPVQQFRNGP------NATDNTIIMDAIELANTNQGINAVCIVST 97 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK--NEIARDPDE 179 D + +L L+ V + + P + F L E D Sbjct: 98 DSDYYSLALKLREYGLYVLGIGKSNAKPLW-----VNACNEFKYLENFDETEEYEEDAKS 152 Query: 180 DKK 182 KK Sbjct: 153 GKK 155 >gi|221369511|ref|YP_002520607.1| hypothetical protein RSKD131_3674 [Rhodobacter sphaeroides KD131] gi|221162563|gb|ACM03534.1| Hypothetical Protein RSKD131_3674 [Rhodobacter sphaeroides KD131] Length = 223 Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 56/162 (34%), Gaps = 37/162 (22%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 + A+ +DG N+ A+ ++L+ R Y Sbjct: 4 RPAVLVDGDNISAAHGR--------QILEIARGHGTPGVVRVYGNA-----------QCP 44 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124 DW G++++ K++ D+ LA+DA E + G+E V+ + DG Sbjct: 45 KDWHEAWGYRMI-----------HAGSGKNASDLLLAIDAMELALARGVEAFVVATSDGD 93 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 F+ L L+ V V + R F++L Sbjct: 94 FSHLAHRLRELGTAVIGVGEAKAPA-----SFRGACSRFVEL 130 >gi|302404503|ref|XP_003000089.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102] gi|261361271|gb|EEY23699.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102] Length = 264 Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats. Identities = 18/122 (14%), Positives = 39/122 (31%), Gaps = 11/122 (9%) Query: 50 TTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ 109 + E + L + + + F + ++F G K++ D + +DA + Sbjct: 17 SARRSPDEPTATGLATVFEAGRSSCFTQSIQPVQQFAYTSG----KNATDSAMIIDAMDL 72 Query: 110 --SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 + + + S D FT L A ++ V + + D F Sbjct: 73 LYTNRFDGFCLASSDSDFTRLAARIRESGLVVYGFGERKTPKPFVA-----ACDKFTHFE 127 Query: 168 YL 169 + Sbjct: 128 NI 129 >gi|269124811|ref|YP_003298181.1| hypothetical protein Tcur_0546 [Thermomonospora curvata DSM 43183] gi|268309769|gb|ACY96143.1| protein of unknown function DUF88 [Thermomonospora curvata DSM 43183] Length = 426 Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats. Identities = 33/199 (16%), Positives = 64/199 (32%), Gaps = 37/199 (18%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDI------DYRKLLKAFR------SRAIVIRAYY 48 M + A ++D N++ L D+ + L+ + + Sbjct: 1 MRYS--RAAFYLDFDNVFGGLFKLDPDVAIQFASNPGVWLQRLSTTLTVDAPRRWLVLRC 58 Query: 49 YTTVVGDPEQQ-------FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVE 101 Y G + GF+V+ K+ D+ Sbjct: 59 YLNPAGWVDYHPPLGEPSRLQFFRFRSSFISAGFEVIDCPR--------YNATKNGADIR 110 Query: 102 LAVDAFEQSE---GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRR 158 +AVD + + VI SGD T L+ L+R ++ ++S+V A++ Sbjct: 111 IAVDVVDALSADVTYDEFVIASGDSDMTPLLQRLRRADRRTVVMSSVD-----AAEAFIS 165 Query: 159 QADYFMDLAYLKNEIARDP 177 AD ++ L + +P Sbjct: 166 IADRTINGQQLLELVQGEP 184 >gi|219848211|ref|YP_002462644.1| hypothetical protein Cagg_1300 [Chloroflexus aggregans DSM 9485] gi|219542470|gb|ACL24208.1| protein of unknown function DUF88 [Chloroflexus aggregans DSM 9485] Length = 208 Score = 84.3 bits (207), Expect = 7e-15, Method: Composition-based stats. Identities = 31/188 (16%), Positives = 63/188 (33%), Gaps = 20/188 (10%) Query: 7 KIALFIDGANL------YASSKALGF--DIDYRKLLKAF---RSRAIVIRAYYYTTVVGD 55 +I +F DG+ + + K +G+ + +L++ F + + + Y + Sbjct: 6 RIGVFYDGSYFSYAQTYFYAEKKVGWLSFTPFHRLIEQFISSKEQRYAMHRIVYASWHQG 65 Query: 56 PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGL 113 ++ + + +DV LAVD E + Sbjct: 66 LFPASQTNEKQFFIERNRHLDLMHAGIEPKYVPMAPSGHEKGVDVSLAVDVMERVMEGKI 125 Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASD---QLRRQADYFMDLAYLK 170 + V+ +GDG T L + + +V + P S +L +Y ++ L Sbjct: 126 DVAVLVTGDGDLTPLARTVMKHGVRVGVFYFEYDSPQRNSRVNGRLITACNYAFNVNDL- 184 Query: 171 NEIARDPD 178 RDP Sbjct: 185 ---ERDPR 189 >gi|159905990|ref|YP_001549652.1| hypothetical protein MmarC6_1608 [Methanococcus maripaludis C6] gi|159887483|gb|ABX02420.1| protein of unknown function DUF88 [Methanococcus maripaludis C6] Length = 215 Score = 83.9 bits (206), Expect = 8e-15, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 64/181 (35%), Gaps = 38/181 (20%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 K+AL IDG N+ F++D K+ A ++ Y L Sbjct: 22 KMALLIDGPNM----LRKEFNVDLDKVRDALEQFGDIVVGRVYLN--------QYASDKL 69 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124 ++ + GF+ +DVE+AVD E + L+ LV + D Sbjct: 70 IEAIANQGFEPRI--------------SAGDVDVEMAVDGTELIFNKNLDTLVYMTRDAD 115 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM------DLAYLKNEIARDPD 178 F + + + K++ +V S ++ AD+ + +L K E + Sbjct: 116 FLPAIRKAKERGKQIIVVGAEPGF----STAIQNIADHVIRVEEDFELDKEKLEQKKRDR 171 Query: 179 E 179 E Sbjct: 172 E 172 >gi|119898152|ref|YP_933365.1| hypothetical protein azo1861 [Azoarcus sp. BH72] gi|119670565|emb|CAL94478.1| hypothetical protein azo1861 [Azoarcus sp. BH72] Length = 502 Score = 83.9 bits (206), Expect = 9e-15, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 63/181 (34%), Gaps = 39/181 (21%) Query: 7 KIALFIDGANLYASSKALGFDI------DYRKLLKAFRS------------RAIVIRAYY 48 K ALF+D N+Y+ + L + + L+ S + V+ Sbjct: 2 KSALFVDFDNVYSGLRKLDPRLADLFAQRPQDWLQWLISSLGLPDDAPVDAKRRVLVRRC 61 Query: 49 YTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELA---VD 105 Y + GF+++ A K+S D+ + +D Sbjct: 62 YLNP--------QAYQRFRWSFNLAGFEIIDCPAL-------TSEGKTSTDIHMVLDTID 106 Query: 106 AFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTI--VSTVLSDPSMASDQLRRQADYF 163 + + +IFS D FT ++ L+R ++ T+ + + ++D L D F Sbjct: 107 LLQHEAHYDEFIIFSADADFTPVLRKLRRWDRRTTVLAIGFPSAAYRASADLLIDV-DTF 165 Query: 164 M 164 + Sbjct: 166 V 166 >gi|323455527|gb|EGB11395.1| hypothetical protein AURANDRAFT_8184 [Aureococcus anophagefferens] Length = 135 Score = 83.9 bits (206), Expect = 9e-15, Method: Composition-based stats. Identities = 22/162 (13%), Positives = 45/162 (27%), Gaps = 30/162 (18%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +A+ ID N +S +++ Y + Sbjct: 2 LAILIDADNTSHNS--------IDLIMRETARFGTRSARRIYGDWASPQLAPWRARIA-- 51 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDGCF 125 + ++F+ K++ D L +DA + S + V+ S D F Sbjct: 52 --------EHSLVPVQQFSHG-----GKNATDSALIIDAMDLLHSNRYQAFVLVSSDADF 98 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 T L ++ V V + + F+ + Sbjct: 99 TRLATRIREHPSTVVGVG-----RAQTPKGFVNACNAFITIE 135 >gi|149908210|ref|ZP_01896874.1| hypothetical protein PE36_01852 [Moritella sp. PE36] gi|149808752|gb|EDM68685.1| hypothetical protein PE36_01852 [Moritella sp. PE36] Length = 304 Score = 83.9 bits (206), Expect = 9e-15, Method: Composition-based stats. Identities = 24/164 (14%), Positives = 52/164 (31%), Gaps = 32/164 (19%) Query: 9 ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68 A+ +D N + DY +L+ V + Y ++ + Sbjct: 8 AVLVDAENASHN--------DYLAMLEEVEKYGTVAIKWVYADWTDPHQKAWK------- 52 Query: 69 WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLEHLVIFSGDGCF 125 + + ++F K + D L +DA E + + + I S DG F Sbjct: 53 ---DILHETASSPKQQFHYG------KDAADHALMMDAIEVTNNNSRVNAVCIVSSDGGF 103 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 ++ ++ V + ++ R+ F+ + L Sbjct: 104 YSVAQRIREYGIHVMAIG-----KKNTPERFRKACHNFVFIDNL 142 >gi|75909290|ref|YP_323586.1| hypothetical protein Ava_3082 [Anabaena variabilis ATCC 29413] gi|75703015|gb|ABA22691.1| Protein of unknown function DUF88 [Anabaena variabilis ATCC 29413] Length = 261 Score = 83.9 bits (206), Expect = 9e-15, Method: Composition-based stats. Identities = 38/171 (22%), Positives = 67/171 (39%), Gaps = 28/171 (16%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +AL D N+ + + LL+ S+ +I Y +F Sbjct: 19 VALACDYQNVPLTPDTA------KLLLEFATSKGRLIHKNVYYN------SKFKNQADAK 66 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGL--EHLVIFSGDGCF 125 L F + +K+S D +L VD + + L + +I SGDG F Sbjct: 67 RNLANLSFNWIDVPCL----------LKNSADNQLIVDCLQVNNNLSPDIFIIVSGDGDF 116 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 TTL+ LQ+ K+V +++ + +L+ AD F + L +I ++ Sbjct: 117 TTLINPLQKLGKQVIVIAEAGNVK----QKLKELADEFYFIEELSQKIQQE 163 >gi|220907876|ref|YP_002483187.1| hypothetical protein Cyan7425_2469 [Cyanothece sp. PCC 7425] gi|219864487|gb|ACL44826.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7425] Length = 629 Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 35/166 (21%), Positives = 66/166 (39%), Gaps = 19/166 (11%) Query: 7 KIALFIDGANL---YASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 K A+F D NL Y S+ L + +++ R + + + + + Sbjct: 29 KSAIFYDIENLLRGYNFSQELLESLSLKEIANTIRKTGKIDQFAVQKAYANWSDPRLKTM 88 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFS 120 ++ ++ + F R+R K++ D++L +DA + ++ VI S Sbjct: 89 RVEIN-------ELGIDPIQVF--GFSRERTKNAADIQLVIDAINLANLRPSIDTFVIVS 139 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 GDG F +L L KKV + S AS + D F+++ Sbjct: 140 GDGGFASLAKYLHECGKKVICCA----YKSSASKTFQSVCDGFVEI 181 >gi|294495770|ref|YP_003542263.1| hypothetical protein Mmah_1111 [Methanohalophilus mahii DSM 5219] gi|292666769|gb|ADE36618.1| protein of unknown function DUF88 [Methanohalophilus mahii DSM 5219] Length = 206 Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 35/183 (19%), Positives = 64/183 (34%), Gaps = 21/183 (11%) Query: 3 DPREKIALFIDGANL---YASSKALGFDIDYRKLLKAFR-----------SRAIVIRAYY 48 ++ +FIDG NL Y S G + + +IRA Y Sbjct: 19 PSYRRMMVFIDGENLVFNYLSLLKNGKVPNDPVQHEKDVFVWHINSVVNPQFHEIIRANY 78 Query: 49 YTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE 108 YT + G E + L F + R + K +D+++ VD Sbjct: 79 YTYITGSDETIIDQIKKLAYARPPRSKLPHNLYPVVFKKPKKRAQSKG-VDIQMTVDILS 137 Query: 109 --QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 + ++ + +F+GDG + ++ R K+V + + +L + D F L Sbjct: 138 QVYNNNIDTVYLFAGDGDYLPVINEAIRMGKQVYLAAFSHGLN----KKLVNKVDQFHLL 193 Query: 167 AYL 169 + Sbjct: 194 DDI 196 >gi|188586884|ref|YP_001918429.1| protein of unknown function DUF88 [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351571|gb|ACB85841.1| protein of unknown function DUF88 [Natranaerobius thermophilus JW/NM-WN-LF] Length = 188 Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 35/188 (18%), Positives = 69/188 (36%), Gaps = 20/188 (10%) Query: 1 MFDPREKIALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIV--IRAYYYTTVV---- 53 M + R+ + +FIDG L LG IDY +L + ++ +R YYY + Sbjct: 1 MRNYRQSLNIFIDGGFLEKVFAKLGEPKIDYLRLYSWISRQVMIPRLRTYYYHCLPYQGN 60 Query: 54 ------GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAF 107 D + + L + ++ + + +E + +DV +A+D Sbjct: 61 PPSQGEKDRFSKKQRFFNKISSLPRSEVRLGSLAFRGRSEEKQPIFEQKKVDVLMALDIA 120 Query: 108 EQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165 + + + H+ + S D F + + K V ++ + P L D + Sbjct: 121 RSAFEQRISHIALISSDSDFVPAIQMAKDKGIIVYLLYSHEIKPHH---DLVDACDEVIY 177 Query: 166 L--AYLKN 171 L +K Sbjct: 178 LTMDDIKE 185 >gi|320101761|ref|YP_004177352.1| hypothetical protein Isop_0206 [Isosphaera pallida ATCC 43644] gi|319749043|gb|ADV60803.1| hypothetical protein Isop_0206 [Isosphaera pallida ATCC 43644] Length = 493 Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 44/181 (24%), Positives = 67/181 (37%), Gaps = 26/181 (14%) Query: 8 IALFIDGANL---YASSKALGFDIDYRKLLKAFR---SRAIVIRAYYYTTVVGDPEQQFS 61 A+F D NL Y S+ L ++ ++L++ R V Y Sbjct: 6 TAIFYDLENLLKGYNFSQQLLTNLSLVEILESIRATNRLGKVALQRAYANWSDP------ 59 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG---LEHLVI 118 L L ++ G + F R K++ D+++A+DA + + LE VI Sbjct: 60 RLASLRGEVNDLGID----PIQVF--GFARDSRKNAADIQMAIDAIDLAHTRPGLEIFVI 113 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 SGDG F+ L L K V + S A+ R D F+ LA E R Sbjct: 114 VSGDGGFSALARKLHEYGKTVIGCA----YQSAANRTFRAVCDEFVWLADPIEE-ERGDR 168 Query: 179 E 179 Sbjct: 169 S 169 >gi|46580394|ref|YP_011202.1| hypothetical protein DVU1985 [Desulfovibrio vulgaris str. Hildenborough] gi|120602234|ref|YP_966634.1| hypothetical protein Dvul_1187 [Desulfovibrio vulgaris DP4] gi|46449811|gb|AAS96461.1| conserved domain protein [Desulfovibrio vulgaris str. Hildenborough] gi|120562463|gb|ABM28207.1| conserved hypothetical protein [Desulfovibrio vulgaris DP4] gi|311233631|gb|ADP86485.1| hypothetical protein Deval_1329 [Desulfovibrio vulgaris RCH1] Length = 418 Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 36/189 (19%), Positives = 69/189 (36%), Gaps = 35/189 (18%) Query: 9 ALFIDGANLYASSKALG------FDIDYRKLLKAFRS------RAIVIRAYYYTTVVGDP 56 AL++D N+Y + + F + ++ LK +R + Sbjct: 13 ALYVDFDNIYTRLREMDPETARLFGRNPQRWLKWLEGHALKMLYGDGVRRR---ILKRIC 69 Query: 57 EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE---QSEGL 113 + FQVV ++ K+S D+ L +D + + Sbjct: 70 YLNPEWYQEYRPYFIRAAFQVVDCP-------PLTQQGKTSADIHLVMDCMDALSHTTRF 122 Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM---ASDQLRRQADYFMDLAYLK 170 + +I SGD FT L+ +Q ++ ++S + P+ AS ++R D+F+ Sbjct: 123 DEFIILSGDADFTPLLIRIQEHARRSLVLSVGYTSPAYAAAASWRIRE--DWFV-----A 175 Query: 171 NEIARDPDE 179 + DP E Sbjct: 176 QAVEEDPQE 184 >gi|254417286|ref|ZP_05031030.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC 7420] gi|196175939|gb|EDX70959.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC 7420] Length = 110 Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats. Identities = 34/102 (33%), Positives = 61/102 (59%), Gaps = 8/102 (7%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + R ++A+FIDG+NL+ ++ LG +IDY KLL + + ++R+++YT V E+Q Sbjct: 17 LENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLVRLTAGSRLLRSFFYTGVDRTNEKQ-- 74 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELA 103 L W+ NG++V+AK + + K+++DVE+A Sbjct: 75 --QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIA 110 >gi|300024275|ref|YP_003756886.1| hypothetical protein Hden_2769 [Hyphomicrobium denitrificans ATCC 51888] gi|299526096|gb|ADJ24565.1| protein of unknown function DUF88 [Hyphomicrobium denitrificans ATCC 51888] Length = 656 Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 32/200 (16%), Positives = 65/200 (32%), Gaps = 37/200 (18%) Query: 10 LFIDGANLYASSKALG------FDIDYRKLLKAFRSR--------------AIVIRAYYY 49 +F+D N+Y S K F D L+ S ++ + Y Sbjct: 13 VFVDYDNVYLSLKRKNEDAAKRFAKDSSIWLQGIASGELITSKTSLPVPTERRIVMSRCY 72 Query: 50 TTVVG-----DPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAV 104 D + +GF+V+ +++K+S D+ + + Sbjct: 73 GNSQPRRNAHDNSTDMCSFPFIRHHFQRSGFEVIDCP-------PLTQQLKNSADIRIVM 125 Query: 105 DAFEQSEG---LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMA--SDQLRRQ 159 D + + +I SGD FT ++ L+ ++ + + + SD ++ Sbjct: 126 DVSDILNHPTFFDEFIILSGDADFTPVLHRLRAHARRTVVYANDHTALPYTAISDGEIKE 185 Query: 160 ADYFMDLAYLKNEIARDPDE 179 +D L + P E Sbjct: 186 SDLLALLTNSRAIAGETPRE 205 >gi|298292631|ref|YP_003694570.1| hypothetical protein Snov_2657 [Starkeya novella DSM 506] gi|296929142|gb|ADH89951.1| protein of unknown function DUF88 [Starkeya novella DSM 506] Length = 208 Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 35/188 (18%), Positives = 72/188 (38%), Gaps = 13/188 (6%) Query: 7 KIALFIDGANLYASSKALG----FDIDYRKLLK-AFRSRAIVIRAYYYTTVVGDPEQQFS 61 ++A ++DG NLY + ALG ++ R L + +++R ++T + Sbjct: 2 RVACYVDGFNLYHAVDALGDARLKWLNLRSLAESYLAPDDVLVRTVFFTAFNTWEHAKRQ 61 Query: 62 PLHPLLDWLHYNGFQVVA----KVAKEF--TENCGRKRVKSSMDVELAVDAFEQSEG--L 113 + L G +VV KV K E + R + DV +A++ + Sbjct: 62 RHVNYVKALGATGVEVVLSRFDKVHKHCFTHERFCKLREEKQTDVAIAIEVMSDCYERGI 121 Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 E +++ + D +V ++ + + I A+ +L + +L + Sbjct: 122 ERVLLITADSDQVPMVRRIRDRFPETIIFMIAPPKRLNAARELGQACSGVAELTAGRLRQ 181 Query: 174 ARDPDEDK 181 PDE + Sbjct: 182 HALPDELR 189 >gi|183982600|ref|YP_001850891.1| hypothetical protein MMAR_2590 [Mycobacterium marinum M] gi|183175926|gb|ACC41036.1| conserved hypothetical protein [Mycobacterium marinum M] Length = 288 Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 61/207 (29%), Gaps = 42/207 (20%) Query: 1 MFDP-REKIALFIDGANL-------------YASSKALGFD--------IDYRKLLKAFR 38 M D ++A++ D N+ + K+ G + +D ++ Sbjct: 1 MTDSSTSRVAVYFDFDNIVISRYEQVHGRNTFHRDKSKGLEQERLQLATVDLGAIIDFAS 60 Query: 39 SRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSM 98 S ++ Y D + G V K+ Sbjct: 61 SFGTLVLTRAYADWSADVNAGYHGQL--------VGRAVDLVQL-----FPAASYGKNGA 107 Query: 99 DVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQ 155 D+ LAVDA E L H+VI GD + L +R + V + +S Sbjct: 108 DIRLAVDAVEDMFRLPDLTHVVIVGGDSDYIALAQRCKRLGRYVVGI----GVAGASSGS 163 Query: 156 LRRQADYFMDLAYLKNEIARDPDEDKK 182 L D F+ L P KK Sbjct: 164 LAAACDEFVTYDALPGIPTLPPPAAKK 190 >gi|217968792|ref|YP_002354026.1| hypothetical protein Tmz1t_0344 [Thauera sp. MZ1T] gi|217506119|gb|ACK53130.1| protein of unknown function DUF88 [Thauera sp. MZ1T] Length = 504 Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 65/181 (35%), Gaps = 39/181 (21%) Query: 7 KIALFIDGANLYASSKAL------GFDIDYRKLLKAF------------RSRAIVIRAYY 48 K ALF+D N+Y+ + L F ++ ++ +R V+ Sbjct: 2 KSALFVDFDNVYSGLRKLDPAMADQFAQKPQRWMQWLVASLGLPEHSPESARRRVLVRRC 61 Query: 49 YTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE 108 Y + GF+++ K+S D+ + +D + Sbjct: 62 YLNP--------QVYQRFRPSFNLAGFEIIDCP-------SLTSEGKTSTDIHMVLDIID 106 Query: 109 QSEG---LEHLVIFSGDGCFTTLVAALQRKVKKVTI--VSTVLSDPSMASDQLRRQADYF 163 + + ++FS D FT ++ L+R ++ T+ + + ++D L Q D F Sbjct: 107 LLQHEAHYDEFIVFSADADFTPVLRKLRRWDRRTTVLAIGFPSAAYRASADLLIDQ-DLF 165 Query: 164 M 164 + Sbjct: 166 V 166 >gi|205356564|ref|ZP_03223327.1| hypothetical protein Cj8421_0189 [Campylobacter jejuni subsp. jejuni CG8421] gi|205345569|gb|EDZ32209.1| hypothetical protein Cj8421_0189 [Campylobacter jejuni subsp. jejuni CG8421] Length = 683 Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 55/175 (31%), Gaps = 31/175 (17%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 + IA+FID N+ +K D VI Y Q + Sbjct: 3 NKSIAIFIDAENIP--AKYAKSIFDI------ASDYGEVIIKRIYGDWTQKNIQGW---- 50 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGD 122 + ++F K+S D+ L + + ++ VI S D Sbjct: 51 ------REQIAEYSLIAMQQF----NFAANKNSSDMYLITEIMSIFYEKNIDIFVIVSSD 100 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 +T+L+ L+ K+V + S S F L K+E ++ Sbjct: 101 SDYTSLIQKLRENKKQVIGMGLEKSIKSY-----VNAFSEFFYLD--KDESKKED 148 >gi|217968518|ref|YP_002353752.1| hypothetical protein Tmz1t_0056 [Thauera sp. MZ1T] gi|217505845|gb|ACK52856.1| protein of unknown function DUF88 [Thauera sp. MZ1T] Length = 448 Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 62/181 (34%), Gaps = 39/181 (21%) Query: 7 KIALFIDGANLYASSKALGFDI------DYRKLLKAFRS------------RAIVIRAYY 48 K ALF+D N+Y+ + L I + + R ++ Sbjct: 2 KSALFVDFDNVYSGLRKLDPAIADRFARQPLEWVNWVIGELELPDHAPAGARRRLLVRRC 61 Query: 49 YTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE 108 Y + GF+++ A K+S D+ + +D + Sbjct: 62 YLNP--------QAYQRFRPSFNLAGFEIIDCPAL-------TSEGKTSTDIHMVLDIID 106 Query: 109 QSEG---LEHLVIFSGDGCFTTLVAALQRKVKKVTI--VSTVLSDPSMASDQLRRQADYF 163 + + ++FS D FT ++ L+R ++ T+ + + ++D L D F Sbjct: 107 LLQHEARYDEFIVFSADADFTPVLRKLRRWDRRTTVLAIGFPSAAYRASADLLID-PDEF 165 Query: 164 M 164 + Sbjct: 166 V 166 >gi|289610064|emb|CBI60331.1| unnamed protein product [Sordaria macrospora] Length = 257 Score = 83.1 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 31/186 (16%), Positives = 58/186 (31%), Gaps = 31/186 (16%) Query: 10 LFIDGANLYASSK------ALGFDIDYRKLLKAFR-----SRAIVIRAYYYTTVVGD--- 55 +F+D N++ + A+ F D L + A Y G+ Sbjct: 7 IFVDFDNVFTALWGIDEGLAIRFASDPADWLTRLGTLDTDEPRRWLVARCYMNPRGNVSA 66 Query: 56 --PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 GF+V+ K++ D+ + +D + Sbjct: 67 PGERNDRLWFSNFRTNFVRAGFEVIDCP-------PLTWGAKNAADIRMVIDVLDLLGHR 119 Query: 113 --LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 V SGD FT L+ L+ + ++ TI+S + S A+ + L L+ Sbjct: 120 TRFGEFVFLSGDSDFTPLLHRLRAEDRRTTILSPGHLAAAYTS-----VAERVLGLDTLE 174 Query: 171 NEIARD 176 + Sbjct: 175 TLLTET 180 >gi|303247327|ref|ZP_07333600.1| protein of unknown function DUF88 [Desulfovibrio fructosovorans JJ] gi|302491241|gb|EFL51130.1| protein of unknown function DUF88 [Desulfovibrio fructosovorans JJ] Length = 193 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 35/190 (18%), Positives = 61/190 (32%), Gaps = 29/190 (15%) Query: 11 FIDGANLYASSKALGFD--IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68 ID +Y D IDY KL + RAYY +V + + Sbjct: 8 LIDAGYMYRGQSIYNRDYSIDYVKLRNKLEIEEPLWRAYYLNSVPNPTPDAQVSFYNWMR 67 Query: 69 WLHYNGFQVVAK---------------------VAKEFTENCGR--KRVKSSMDVELAVD 105 G +++ K + R + + +DV LA Sbjct: 68 SAPPIGPKIITKLYELRSSEITDLYCEHCRRKVPVACPNDPKHRLSREQQKGVDVGLATL 127 Query: 106 AFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165 A + + L++ SGD + + K K+ ++ S L+ +AD Sbjct: 128 ALTHVDNYDTLILSSGDSDLLDAIEYITEKNKRFELLVFKNGV----STDLQCRADRIYW 183 Query: 166 LAYLKNEIAR 175 + +E+AR Sbjct: 184 IDDFASEVAR 193 >gi|254776999|ref|ZP_05218515.1| hypothetical protein MaviaA2_20351 [Mycobacterium avium subsp. avium ATCC 25291] Length = 296 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 60/207 (28%), Gaps = 46/207 (22%) Query: 1 MFDP-REKIALFIDGANLYASS-----------------------KALGFDIDYRKLLKA 36 M +P ++A+++D N+ S + +D +L Sbjct: 5 MSEPVAPRVAVYLDFDNIVISRYDQIHGRNSFQRDKAKGLEQFTERLEQATVDVGAILDF 64 Query: 37 FRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKS 96 S ++ Y + + F K+ Sbjct: 65 ASSFGTLVLTRAYADWSAEINAGYRGQLVARAVDLVQLF-------------PAAAYGKN 111 Query: 97 SMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMAS 153 D+ LAVDA E L H+VI +GD + L +R + V + +S Sbjct: 112 GADIRLAVDAVEDMFRLPDLTHVVIVAGDSDYIPLAQRCKRLGRYVVGI----GVAGASS 167 Query: 154 DQLRRQADYFMDLAYLKNE--IARDPD 178 L D F+ L + R P Sbjct: 168 RALAAACDEFVIYDALPGVTALDRTPA 194 >gi|258649161|ref|ZP_05736630.1| conserved hypothetical protein [Prevotella tannerae ATCC 51259] gi|260850826|gb|EEX70695.1| conserved hypothetical protein [Prevotella tannerae ATCC 51259] Length = 239 Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 49/158 (31%), Gaps = 29/158 (18%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 IA+ IDG N+ ++ LG ++ S I Y +++ Sbjct: 14 IAILIDGDNV--AADKLG------DIISFVSSYGNPIIRRIYADWTKPAMKRWK------ 59 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCF 125 F A + VK++ D+ L +DA + ++ I S D + Sbjct: 60 --EDAKTFSFRLVEALSYVG------VKNTTDMALVIDAMDLLHGKNVQGFCIVSSDSDY 111 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163 T L ++ + V L+ F Sbjct: 112 TLLAQRIREEGLLVLGYGEQK-----TPASLQNSCHEF 144 >gi|146279485|ref|YP_001169643.1| hypothetical protein Rsph17025_3462 [Rhodobacter sphaeroides ATCC 17025] gi|145557726|gb|ABP72338.1| hypothetical protein Rsph17025_3462 [Rhodobacter sphaeroides ATCC 17025] Length = 225 Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 33/161 (20%), Positives = 51/161 (31%), Gaps = 37/161 (22%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +A+ IDG NL S K ++++ + Y Sbjct: 4 VAVLIDGDNL--SGKHA------ARIVEVAAALGRPTVQRVYVDAQRPC----------- 44 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCF 125 DW GF++ K++ D+ LA+DA E + + VI S D F Sbjct: 45 DWHAARGFRL-----------MHAGTGKNASDLLLALDAVELALRGDADQFVIASSDRDF 93 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 T L L+ VT V R F+ + Sbjct: 94 THLALRLREYGASVTGVGEAK-----TPQSFRAACADFIVI 129 >gi|41410167|ref|NP_963003.1| hypothetical protein MAP4069c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41399000|gb|AAS06619.1| hypothetical protein MAP_4069c [Mycobacterium avium subsp. paratuberculosis K-10] Length = 292 Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 35/207 (16%), Positives = 60/207 (28%), Gaps = 46/207 (22%) Query: 1 MFDP-REKIALFIDGANLYASS-----------------------KALGFDIDYRKLLKA 36 M +P ++A+++D N+ S + +D +L Sbjct: 1 MSEPVAPRVAVYLDFDNIVISRYDQIHGRNSFQRDKAKGLEQFTERLEQATVDVGAILDF 60 Query: 37 FRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKS 96 S ++ Y + + F K+ Sbjct: 61 ASSFGTLVLTRAYADWSAEINAGYRGQLVARAVDLVQLF-------------PAAAYGKN 107 Query: 97 SMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMAS 153 D+ LAVDA E L H+VI +GD + L +R + V + +S Sbjct: 108 GADIRLAVDAVEDMFRLPDLTHVVIVAGDSDYIPLAQRCKRLGRYVVGI----GVAGASS 163 Query: 154 DQLRRQADYFMDLAYLKNE--IARDPD 178 L D F+ L + R P Sbjct: 164 RALAAACDEFVIYDALPGVTALDRTPA 190 >gi|301312472|ref|ZP_07218386.1| conserved hypothetical protein [Bacteroides sp. 20_3] gi|300829538|gb|EFK60194.1| conserved hypothetical protein [Bacteroides sp. 20_3] Length = 234 Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 23/162 (14%), Positives = 46/162 (28%), Gaps = 29/162 (17%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +A+ IDG N ++ + Y L Sbjct: 11 VAVLIDGDNASFE--------KMEDIMGFVSRYGDAVVRRIYGDWT------RKALSAWK 56 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCF 125 + +GF++V + K++ D+ L +DA + + + + DG + Sbjct: 57 ETAREHGFRLV--------QASSHASGKNTTDIALVIDAMDILRDGRADCFCLVASDGDY 108 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 + L ++ KV L R F+ Sbjct: 109 SLLAQRIREAGLKVLGYGEGK-----TPVSLVRSCSVFLYAD 145 >gi|29348060|ref|NP_811563.1| hypothetical protein BT_2650 [Bacteroides thetaiotaomicron VPI-5482] gi|29339962|gb|AAO77757.1| conserved hypothetical protein [Bacteroides thetaiotaomicron VPI-5482] Length = 233 Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 26/172 (15%), Positives = 49/172 (28%), Gaps = 30/172 (17%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 + +A+ IDG N +++ + Y + Sbjct: 4 EKDLSVAVLIDGDN--------ASSEKMEDVMRFVSRYGAAVVRRIYGDWTKKSLSGWK- 54 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFS 120 D F++V + K++ D+ L +DA + + + + Sbjct: 55 -----DAARDYSFRMV--------QASSFVPGKNTTDIALVMDAMDILHEGRVGCFCLVA 101 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 DG +T L ++ V L R F+ LA K E Sbjct: 102 SDGDYTLLAQRIRESGLTVLGYGEGK-----TPAALVRSCTEFL-LADRKEE 147 >gi|302870557|ref|YP_003839194.1| hypothetical protein Micau_6123 [Micromonospora aurantiaca ATCC 27029] gi|302573416|gb|ADL49618.1| protein of unknown function DUF88 [Micromonospora aurantiaca ATCC 27029] Length = 441 Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 40/190 (21%), Positives = 67/190 (35%), Gaps = 35/190 (18%) Query: 7 KIALFIDGANLYASSKALGFDI------DYRKLLKAFR--------SRAIVIRAY----- 47 + AL++D N+++ L D+ D L+ R +V+R Y Sbjct: 5 RAALYLDFDNVFSGLYKLDPDVAVHFAEDPAGWLRRLATTATTDGARRWLVLRCYLNPAG 64 Query: 48 YYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAF 107 + EQ GF V+ K++ D+ + VDA Sbjct: 65 WVYRPDPGGEQTRLYFSKFRPSFVRAGFDVIDCPR--------YSSTKNAADIRIVVDAV 116 Query: 108 EQSE---GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 + + VI SGD T L+ L+R ++ IVS P+ A++ AD + Sbjct: 117 DALSADTRYDEFVIASGDSDMTPLLQRLRRSDRRTMIVS-----PADAAEAFTAIADQVL 171 Query: 165 DLAYLKNEIA 174 D L + Sbjct: 172 DSQQLLALVQ 181 >gi|302131135|ref|ZP_07257125.1| hypothetical protein PsyrptN_07055 [Pseudomonas syringae pv. tomato NCPPB 1108] Length = 170 Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 21/170 (12%), Positives = 43/170 (25%), Gaps = 48/170 (28%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 + ++ +A+ ID N A+ L + + Y G + Sbjct: 8 NAQKHLAILIDADNAPAAI--------VEGLFEEIAKHGVASVKRIYGDWTGPQLGGWKK 59 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 + ++F G+ + S D Sbjct: 60 ----------VLLDHSIQPIQQFAYTKGKS-------------------------LVSSD 84 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 FT L + L+ + V S + D F+ + L+ + Sbjct: 85 SDFTRLASRLREEGLTVYGFGEEKSPKPFVA-----ACDKFIYIELLRGD 129 >gi|237708343|ref|ZP_04538824.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|229457564|gb|EEO63285.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] Length = 234 Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats. Identities = 26/169 (15%), Positives = 51/169 (30%), Gaps = 29/169 (17%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +A+ IDG N ++ I Y L Sbjct: 11 VAVLIDGDNASFE--------KMEDIMGFVSRYGDAIVRRIYGDWTK------KALSAWK 56 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCF 125 + +GF++V + K++ D+ L +DA + + + + DG + Sbjct: 57 ETAREHGFRLV--------QASSHAPGKNTTDIALVIDAMDILRDGRADCFCLVASDGDY 108 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 + L ++ KV L R F+ +N+I+ Sbjct: 109 SLLAQRIREAGLKVLGYGEGK-----TPVSLVRSCSVFLYADRKENKIS 152 >gi|91772864|ref|YP_565556.1| hypothetical protein Mbur_0855 [Methanococcoides burtonii DSM 6242] gi|91711879|gb|ABE51806.1| Protein of unknown function DUF88 [Methanococcoides burtonii DSM 6242] Length = 183 Score = 82.4 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 55/166 (33%), Gaps = 32/166 (19%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 R I L +DG N+ F+++ ++ + V + Sbjct: 23 RRSIGLLVDGPNV----LRKEFNVNLEEIRDVLKEYGNVKIGRVFLN--------QYASD 70 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGD 122 L++ + NGF+ + S +DV LAV+ E ++ + + + D Sbjct: 71 KLVEAIENNGFEPIIC--------------SSDVDVRLAVEGMELVYNPTIDTIALVTRD 116 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F L+ K+ + S LR ADY + L Sbjct: 117 ADFKPLLNKANEHGKETILFGVEPGF----STALRNSADYVIILEN 158 >gi|167764633|ref|ZP_02436754.1| hypothetical protein BACSTE_03023 [Bacteroides stercoris ATCC 43183] gi|167697302|gb|EDS13881.1| hypothetical protein BACSTE_03023 [Bacteroides stercoris ATCC 43183] Length = 234 Score = 82.4 bits (202), Expect = 2e-14, Method: Composition-based stats. Identities = 24/162 (14%), Positives = 46/162 (28%), Gaps = 29/162 (17%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +A+ IDG N ++ I Y L Sbjct: 11 VAVLIDGDNASFE--------KMEDIMGFVSRYGDAIVRRIYGDWTK------KALSAWK 56 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCF 125 + +GF++V + K++ D+ L +DA + + + + DG + Sbjct: 57 ETAREHGFRLV--------QASSHAPGKNTTDIALVIDAMDILRDGRADCFCLVASDGDY 108 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 + L ++ KV L R F+ Sbjct: 109 SLLAQRIREAGLKVLGYGEGK-----TPVSLVRSCSVFLYAD 145 >gi|296168350|ref|ZP_06850274.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295896781|gb|EFG76414.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 297 Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats. Identities = 36/205 (17%), Positives = 62/205 (30%), Gaps = 44/205 (21%) Query: 1 MFDP-REKIALFIDGANLY-----------------------ASSKALGFDIDYRKLLKA 36 M +P ++A+++D N+ +++ +D +L Sbjct: 1 MTEPVAARVAVYLDFDNIVISRYDQVNGRSSFQRDKAKGLEQYANRLDRSTVDVGAILDF 60 Query: 37 FRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKS 96 S I++ Y D + F K+ Sbjct: 61 ASSFGILVLTRAYADWSADINAGYRGQLVARAVDLVQLF-------------PAAAYGKN 107 Query: 97 SMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMAS 153 D+ LAVDA E L H+VI +GD + L +R + V + +S Sbjct: 108 GADIRLAVDAVEDMFRLPDLTHVVIVAGDSDYIPLAQRCKRLGRYVVGI----GVAGASS 163 Query: 154 DQLRRQADYFMDLAYLKNEIARDPD 178 L D F+ L A +P Sbjct: 164 RALAAACDEFVVYDSLPGVPALEPQ 188 >gi|301166431|emb|CBW26007.1| hypothetical protein BMS_1128 [Bacteriovorax marinus SJ] Length = 190 Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 29/167 (17%), Positives = 61/167 (36%), Gaps = 28/167 (16%) Query: 6 EKIALFIDGANLYAS----SKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 +++A+ +DG N+ S S+ +++ L+ + R Y+ Sbjct: 9 QQVAVLVDGNNIERSIHAESERHSTMLNFDTLIPKLLVNRGLNRLIYFR----------- 57 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 + + S D+ L++ A + ++ ++ ++I SG Sbjct: 58 ---------EGKNISSKLAERLHDKYHGSVRPCHKSADIPLSIKATQLAQKVDTIIIMSG 108 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 D + LV L+ + +V I + S S L +ADYF + Sbjct: 109 DSDYIELVNHLKSEGVRVEIAAI----ESTTSHLLIEEADYFHPITS 151 >gi|254884216|ref|ZP_05256926.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|254837009|gb|EET17318.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] Length = 217 Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 27/170 (15%), Positives = 52/170 (30%), Gaps = 18/170 (10%) Query: 1 MFDPRE-KIALFIDGANLYASSKALGFD----IDYRKLLKAFRSRAIVIRAYYYTTVVGD 55 M + + ++ ++IDG N Y K + +D KL+++F + A Y + Sbjct: 3 MAEKNKQRVIIYIDGFNFYYGLKTAPWKKYYWLDIVKLMESFLRPNQELIAVKYFSARPT 62 Query: 56 PEQQFSPLHPLLDWLHYNGF------QVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFE 108 + N + + K + F + + DV +A Sbjct: 63 DVGKRKRQDAFFQANKENPKFKLILGKYLKKEIECFKCHNIIHTYEEKESDVRIATQIVA 122 Query: 109 QS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 + + +I S D V + V + P S L Sbjct: 123 DAFQHNCDLAIIVSADSDMIPAVELAKEAKINV----FIYFPPHQYSSNL 168 >gi|332672160|ref|YP_004455168.1| hypothetical protein Celf_3674 [Cellulomonas fimi ATCC 484] gi|332341198|gb|AEE47781.1| hypothetical protein Celf_3674 [Cellulomonas fimi ATCC 484] Length = 377 Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 32/198 (16%), Positives = 55/198 (27%), Gaps = 50/198 (25%) Query: 7 KIALFIDGANLYASS------------------------------KALGFDIDYRKLLKA 36 ++A++ID N+ S + +D +L Sbjct: 8 RVAVYIDFDNIVISRYDQTFRRGEWQRDSARQHRMDAASDDLVDRRLAEARVDVGAILDY 67 Query: 37 FRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKS 96 S V+ + Y + F V VK+ Sbjct: 68 ASSFGSVVVSRAYADWSVPANAGYQRQLVDRAVDLTQLFPV-------------TAGVKN 114 Query: 97 SMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMAS 153 D+ L+VD E + H+V+ +GD + L +R + V + S Sbjct: 115 GADIRLSVDVVEDLFRLPDVTHVVVVAGDSDYIALAQRAKRLGRYVVGI----GVAGATS 170 Query: 154 DQLRRQADYFMDLAYLKN 171 L D F D L + Sbjct: 171 RALMAACDEFADYDDLLD 188 >gi|301311616|ref|ZP_07217543.1| conserved hypothetical protein [Bacteroides sp. 20_3] gi|300830702|gb|EFK61345.1| conserved hypothetical protein [Bacteroides sp. 20_3] Length = 234 Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 23/162 (14%), Positives = 46/162 (28%), Gaps = 29/162 (17%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +A+ IDG N ++ + Y L Sbjct: 11 VAVLIDGDNASFER--------MEDIMGFVSRYGDAVVRRIYGDWT------RKALSAWK 56 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCF 125 + +GF++V + K++ D+ L +DA + + + + DG + Sbjct: 57 ESAREHGFRLV--------QASSHVPGKNTTDIALVIDAMDILRDGQADCFCLVASDGDY 108 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 + L ++ KV L R F+ Sbjct: 109 SLLAQRIREAGLKVLGYGEGK-----TPVSLVRSCSVFLYAD 145 >gi|269956699|ref|YP_003326488.1| hypothetical protein Xcel_1911 [Xylanimonas cellulosilytica DSM 15894] gi|269305380|gb|ACZ30930.1| protein of unknown function DUF88 [Xylanimonas cellulosilytica DSM 15894] Length = 484 Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 61/179 (34%), Gaps = 30/179 (16%) Query: 7 KIALFIDGANLYASS--------KALGFDIDYRKLLKAFRSRAI------VIRAYYYTTV 52 + ++FID L AS+ G +++ KL++ R +A V+R Y+Y + Sbjct: 4 RCSVFIDAGYLLASAATRVTGTSLRSGIHVEFSKLIEGIRRQAEQVSGLPVLRVYWYDSA 63 Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG 112 G K G + +D+ L +D + Sbjct: 64 RNAVPDAQQQ---------RIGELPR---VKLRLGRFGIDGQQKGVDLRLGLDLVTHARN 111 Query: 113 --LEHLVIFSGDGCFTTLVAALQRKVKKVTIVS--TVLSDPSMASDQLRRQADYFMDLA 167 E ++ SGD FT V Q +V +++ S L+R AD + Sbjct: 112 QAAEVFLLVSGDDDFTEAVEEAQVHGVEVILLAAPDAHGSAHAVSRHLQRAADEVYVID 170 >gi|220903862|ref|YP_002479174.1| hypothetical protein Ddes_0587 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868161|gb|ACL48496.1| protein of unknown function DUF88 [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 240 Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 57/162 (35%), Gaps = 25/162 (15%) Query: 9 ALFIDGANLYA--------SSKALG----FDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP 56 AL++D N++ +++A G + + + +R + Sbjct: 13 ALYVDFDNIFTRFLEIDPEAARAFGATPYRWVRWIENHALRILYGEGVRRR---ILKRMC 69 Query: 57 EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE---QSEGL 113 + + FQVV R K+S D+ L +D + S Sbjct: 70 YLNPQRYQEFRNSFIRSAFQVVDCP-------PLTSRGKTSTDIHLVMDCMDDLSHSTKF 122 Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQ 155 + +I SGD FT L+ LQ ++ ++S S P+ + Sbjct: 123 DEFIILSGDADFTPLLIRLQEHARRTLVLSVGYSSPAYTAAA 164 >gi|325854879|ref|ZP_08171631.1| hypothetical protein HMPREF9303_1963 [Prevotella denticola CRIS 18C-A] gi|325484061|gb|EGC86998.1| hypothetical protein HMPREF9303_1963 [Prevotella denticola CRIS 18C-A] Length = 239 Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 50/171 (29%), Gaps = 35/171 (20%) Query: 1 MFDPRE------KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVG 54 M D + IA+ IDG N+ S+ LG ++ I Y Sbjct: 1 MTDKKPIRQEQTNIAVLIDGDNM--SADKLG------DIISFVSIYGNPIVRRIYADWTK 52 Query: 55 DPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--G 112 ++ + A + VK++ D+ L +DA + Sbjct: 53 PAMMRWK--------EEAKVYSFRLVEALSYVG------VKNTTDMTLVIDAMDLLHGKT 98 Query: 113 LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163 ++ I S D +T L ++ + V LR F Sbjct: 99 VQGFCIVSSDSDYTLLAQRIREEGLLVLGYGEHK-----TPVALRNSCHDF 144 >gi|291298318|ref|YP_003509596.1| hypothetical protein Snas_0791 [Stackebrandtia nassauensis DSM 44728] gi|290567538|gb|ADD40503.1| protein of unknown function DUF88 [Stackebrandtia nassauensis DSM 44728] Length = 335 Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 26/187 (13%), Positives = 59/187 (31%), Gaps = 32/187 (17%) Query: 7 KIALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSR-------AIVIRAYYYTT 51 + A+ ID LYA++ + + +D KL+ +R ++R Y++ Sbjct: 15 RYAMLIDVGYLYAAAAEVLLGATSRREYKVDAEKLINTLITRAADQLPGGELLRVYWFDA 74 Query: 52 VVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE 111 + K N + + +D + D + + Sbjct: 75 ARDRVPTVDQR------------VIAAMALVKVRLGNLNSRGQQKGVDAMIRTDLEQLAR 122 Query: 112 G--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 + ++ +GD V Q +V + + +++L +AD L + Sbjct: 123 HGAISEAILLAGDEDMVPAVEIAQAYGVRVHVWGVEPPYGTNQAERLLWEAD---TLDEI 179 Query: 170 KNEIARD 176 E + Sbjct: 180 SAEFCKP 186 >gi|297619281|ref|YP_003707386.1| hypothetical protein Mvol_0754 [Methanococcus voltae A3] gi|297378258|gb|ADI36413.1| protein of unknown function DUF88 [Methanococcus voltae A3] Length = 253 Score = 82.0 bits (201), Expect = 4e-14, Method: Composition-based stats. Identities = 31/180 (17%), Positives = 60/180 (33%), Gaps = 36/180 (20%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 K+AL IDG N+ F++D K+ A ++ Y L Sbjct: 24 KMALLIDGPNM----LRKEFNVDLDKIRDAVEQFGTIVVGRVYLN--------QYASDKL 71 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGC 124 ++ + GF+ +DVE+AVD + ++ +V + D Sbjct: 72 IEAIANQGFEPRI--------------SAGDVDVEMAVDGTDLVHNKNIDTIVYMTRDAD 117 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM----DLAYLKNEIARDPDED 180 F + + + +V S ++ AD+ + D K ++ + E Sbjct: 118 FLPAMRKAKENGVGIIVVGAEPGF----SMAIQNIADHVIKVEEDFELNKQKLEQKKRER 173 >gi|45358613|ref|NP_988170.1| hypothetical protein MMP1050 [Methanococcus maripaludis S2] gi|44921371|emb|CAF30606.1| conserved hypothetical protein [Methanococcus maripaludis S2] Length = 215 Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 64/181 (35%), Gaps = 38/181 (20%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 K+AL IDG N+ F++D K+ A ++ Y L Sbjct: 22 KMALLIDGPNM----LRKEFNVDLDKVRDALEQFGDIVVGRVYLN--------QYASDKL 69 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124 ++ + GF+ +DVE+AV+ E + ++ +V + D Sbjct: 70 IEAIANQGFEPRI--------------SAGDVDVEMAVEGTELIFNKNIDTIVYMTRDAD 115 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM------DLAYLKNEIARDPD 178 F + + + K++ +V S ++ AD+ + +L K E + Sbjct: 116 FLPAIRKAKERGKQIIVVGAEPGF----STAIQNIADHVIRVEEDFELDKEKLEQKKRDR 171 Query: 179 E 179 E Sbjct: 172 E 172 >gi|88810791|ref|ZP_01126048.1| hypothetical protein NB231_16963 [Nitrococcus mobilis Nb-231] gi|88792421|gb|EAR23531.1| hypothetical protein NB231_16963 [Nitrococcus mobilis Nb-231] Length = 196 Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 39/200 (19%), Positives = 72/200 (36%), Gaps = 33/200 (16%) Query: 5 REKIALFIDGANLYAS-SKALGFD--IDYRKLLKAFRSR-AIVIRAYYYTTVVGDPEQQF 60 +++ IDG+ ++A+ + G +DY +L + ++ R YY +V D Sbjct: 1 MKRLW-LIDGSYIHANNIQRFGPHTRVDYLRLRRLIEEHLGVLWRGYYLNSVQSDAHSAR 59 Query: 61 SPLHPLLDWLHYNGFQVVAKVA------------------------KEFTENCGRKRVKS 96 H L NG ++ K+ ++ + + Sbjct: 60 ERFHSWLQSAAPNGPHLIVKLYGLKNERVENAFCVDCGTKIEVCCPHGGPDHHLVNQRQM 119 Query: 97 SMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 +DV LA A E + LV+ SGDG V L K++ + S L Sbjct: 120 GVDVGLATLALAHKERYDCLVLSSGDGDLLDAVEHLCENGKRIELAVFSTGV----STDL 175 Query: 157 RRQADYFMDLAYLKNEIARD 176 + +AD + + +E+A Sbjct: 176 QARADRVLWIDDHMDELAAP 195 >gi|218888135|ref|YP_002437456.1| hypothetical protein DvMF_3051 [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218759089|gb|ACL09988.1| protein of unknown function DUF88 [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 418 Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 36/184 (19%), Positives = 67/184 (36%), Gaps = 32/184 (17%) Query: 8 IALFIDGANLYASSKALGFDI------DYRKLLKAFRS------RAIVIRAYYYTTVVGD 55 AL++D N+Y+ + DI + ++ +K +R + Sbjct: 12 AALYVDFDNIYSRLREQDEDIARAFATNPQRWVKWIEGHALRMLYGDGVRRR---ILKRI 68 Query: 56 PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE---QSEG 112 H + FQVV + K+S D+ L +D + S Sbjct: 69 CYMNPQCFHEFRPFFIRAAFQVVDCP-------PLTNQGKTSADIHLVMDCMDALNHSTR 121 Query: 113 LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMA---SDQLRRQADYFMD--LA 167 + +I SGD FT L+ LQ ++ ++S + P+ S ++R D+F+ L Sbjct: 122 FDEFIILSGDADFTPLLIRLQEHARRPLVLSVGYTSPAYTAAASWRIRE--DWFVQQALE 179 Query: 168 YLKN 171 + Sbjct: 180 DERP 183 >gi|294778673|ref|ZP_06744093.1| conserved hypothetical protein [Bacteroides vulgatus PC510] gi|294447485|gb|EFG16065.1| conserved hypothetical protein [Bacteroides vulgatus PC510] Length = 234 Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 24/169 (14%), Positives = 50/169 (29%), Gaps = 29/169 (17%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +A+ IDG N ++ + Y L Sbjct: 11 VAVLIDGDNASFE--------KMEDIMGFVSRYGDAVVRRIYGDWT------RKSLSAWK 56 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCF 125 + +GF++V + K++ D+ L +DA + + + + DG + Sbjct: 57 ETAREHGFRLV--------QASSHAPGKNTTDIALVIDAMDILRDGRADCFCLVASDGDY 108 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 + L ++ KV L R F+ +N ++ Sbjct: 109 SLLAQRIREAGLKVLGYGEDK-----TPVSLVRSCSVFLYADRKENRVS 152 >gi|257068962|ref|YP_003155217.1| hypothetical protein Bfae_18070 [Brachybacterium faecium DSM 4810] gi|256559780|gb|ACU85627.1| Protein of unknown function DUF88 [Brachybacterium faecium DSM 4810] Length = 335 Score = 81.6 bits (200), Expect = 5e-14, Method: Composition-based stats. Identities = 32/213 (15%), Positives = 58/213 (27%), Gaps = 50/213 (23%) Query: 1 MFDPRE-KIALFIDGANL-------YASSKALGFD---------------------IDYR 31 M D ++ ++A+++D N+ +A D +D Sbjct: 1 MADSQDPRVAVYLDFDNIVMSWYDRVHGRQAYSRDRQRIAEDPTEPEIAERLAKATVDVG 60 Query: 32 KLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGR 91 ++ S ++ Y + F Sbjct: 61 AVIDYAASFGSLMLTRAYADWSSPVNAIYRSQLVARAVDLVQLF-------------PAA 107 Query: 92 KRVKSSMDVELAVDAFE---QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSD 148 K+ D+ LAVD E L H+VI +GD + L +R + V + Sbjct: 108 AYAKNGADIRLAVDTVEDLYLMPDLTHVVIVAGDSDYVPLAQRCRRLGRYVIAM----GV 163 Query: 149 PSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 + L D F L + R + Sbjct: 164 AGSTAKSLAAACDEFESYENL-PGVERPTKPQR 195 >gi|154250322|ref|YP_001411147.1| hypothetical protein Fnod_1655 [Fervidobacterium nodosum Rt17-B1] gi|154154258|gb|ABS61490.1| protein of unknown function DUF88 [Fervidobacterium nodosum Rt17-B1] Length = 432 Score = 81.2 bits (199), Expect = 5e-14, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 59/165 (35%), Gaps = 32/165 (19%) Query: 10 LFI--DGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +FI D N +D + + + ++ Y + +S Sbjct: 11 IFIMFDFQN---------QPVDVQLVYNEAQKYGRIVGGKAYGS--------WSKHKMPS 53 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG---LEHLVIFSGDGC 124 L+ G +++ EF K D+ LAVD E + ++ + +GD Sbjct: 54 FVLYNYGIELIEIPEAEFL------PNKKGNDIRLAVDCVEIALHNNVIDTFFLVTGDAD 107 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 FT LV L+ KKV ++ S AS +L D F+ + Sbjct: 108 FTALVYKLKSYGKKVIALARTKS----ASYELVSAVDLFIPYEDI 148 >gi|295084937|emb|CBK66460.1| Uncharacterized conserved protein [Bacteroides xylanisolvens XB1A] Length = 207 Score = 81.2 bits (199), Expect = 5e-14, Method: Composition-based stats. Identities = 27/175 (15%), Positives = 58/175 (33%), Gaps = 19/175 (10%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLL-----KAFRSRAIVIRAYYYTTVVGDP 56 + ++K+ +++DG N Y K+ + + Y L +S ++ Y++ D Sbjct: 1 MEDKKKVIVYVDGFNFYYGLKSKKWKMCYWLDLVSFFNSFLKSYQELVEVNYFSARPTDA 60 Query: 57 EQQFSPLHPLLDWLHYNGFQVVA-----KVAKE-FTENCGRKRVKSSMDVELAVDAFEQS 110 + F ++ K K + + DV +A + Sbjct: 61 GKHDRQDKLFQANKCNPKFNLILGKYLKKEIKCRYCGGIIHSFEEKETDVRIATKILSDA 120 Query: 111 --EGLEHLVIFSGDGCFTTLVAALQRKV--KKVTIVSTVLSDPSMASDQLRRQAD 161 + + +I S D V ++ +KV + P+ S L +D Sbjct: 121 YKKRCDIAIIVSADSDLIPPVELIREFNPLQKVYV----YFPPNRYSSNLSNLSD 171 >gi|283851692|ref|ZP_06368970.1| protein of unknown function DUF88 [Desulfovibrio sp. FW1012B] gi|283572812|gb|EFC20794.1| protein of unknown function DUF88 [Desulfovibrio sp. FW1012B] Length = 193 Score = 81.2 bits (199), Expect = 5e-14, Method: Composition-based stats. Identities = 35/190 (18%), Positives = 61/190 (32%), Gaps = 29/190 (15%) Query: 11 FIDGANLYASSKALG--FDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68 ID +Y + IDY KL S + RAYY +V + + Sbjct: 8 LIDAGYMYRGQSIYSREYSIDYVKLRNRLESEEPLWRAYYLNSVPHPTPDSQVAFYNWMR 67 Query: 69 WLHYNGFQVVAK---------------------VAKEFTENCGR--KRVKSSMDVELAVD 105 G +++ K + R + + +DV LA Sbjct: 68 SAPPLGPKIITKLYELRSSEITDLYCEQDRRKVPVSCPNDRAHRLSREQQKGVDVGLATL 127 Query: 106 AFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165 A E + L++ SGD + + K K+ ++ S L+ +AD Sbjct: 128 ALTHIENYDTLILSSGDSDLLDAIEYITEKNKRFELLVFKNGV----STDLQCRADRIYW 183 Query: 166 LAYLKNEIAR 175 + ++AR Sbjct: 184 IDEFAQDVAR 193 >gi|256394876|ref|YP_003116440.1| hypothetical protein Caci_5741 [Catenulispora acidiphila DSM 44928] gi|256361102|gb|ACU74599.1| protein of unknown function DUF88 [Catenulispora acidiphila DSM 44928] Length = 435 Score = 81.2 bits (199), Expect = 5e-14, Method: Composition-based stats. Identities = 35/187 (18%), Positives = 64/187 (34%), Gaps = 28/187 (14%) Query: 5 REKIALFIDGANLYASS--------KALGFDIDYRKLLKAFRSRA------IVIRAYYYT 50 ++ A+ +D + A++ G ++DY L+ A RA V+R Y+Y Sbjct: 1 MDRCAVLVDAGYVLAAAANVVSGDPGRPGIEVDYPGLVTALTERAAAETGLPVLRVYWYD 60 Query: 51 TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110 + L +LD G ++ + K + +D L D + Sbjct: 61 AAPATGPTRDQRLLRVLD-----GLKLRLGKLVRRDDG---KFEQKGVDTFLHADLTGLA 112 Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 + +V+ SGD V Q ++ + S +L D M L+ Sbjct: 113 RKRAVADVVLVSGDEDLLHAVEEAQEYGTRIHLWGAASDY--NQSLELIAAVDKSMTLSE 170 Query: 169 --LKNEI 173 LK + Sbjct: 171 EWLKPYV 177 >gi|78357527|ref|YP_388976.1| hypothetical protein Dde_2484 [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219932|gb|ABB39281.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 439 Score = 81.2 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 54/162 (33%), Gaps = 25/162 (15%) Query: 9 ALFIDGANLYASSKA------LGFDIDYRKLLKAFRSR------AIVIRAYYYTTVVGDP 56 ALF+D N+Y F D ++ ++ +R + Sbjct: 13 ALFVDFDNIYTRLAEQDPQYGYLFATDPQRWMRWLEHHALRMLHGDGVRRR---ILKRCC 69 Query: 57 EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG---L 113 N F V K+ K+S D+ L +DA + Sbjct: 70 YLNPQIFQDFRPHFVRNAFSVTDCP-------PLTKQGKTSADIHLVIDALDALSHPTYF 122 Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQ 155 + +I SGD FT L+ L+ +K ++S + P+ A+ Sbjct: 123 DEFIILSGDADFTPLLIRLREHARKTLVLSVGFTSPAYAAAS 164 >gi|298479635|ref|ZP_06997835.1| conserved hypothetical protein [Bacteroides sp. D22] gi|298274025|gb|EFI15586.1| conserved hypothetical protein [Bacteroides sp. D22] Length = 207 Score = 81.2 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 26/175 (14%), Positives = 57/175 (32%), Gaps = 19/175 (10%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLL-----KAFRSRAIVIRAYYYTTVVGDP 56 + ++K+ +++DG N Y K+ + + Y L + ++ Y++ D Sbjct: 1 MEDKKKVIVYVDGFNFYYGLKSKKWKMCYWLDLVSFFNSFLKPYQELVEVNYFSARPTDA 60 Query: 57 EQQFSPLHPLLDWLHYNGFQVVA-----KVAKE-FTENCGRKRVKSSMDVELAVDAFEQS 110 + F ++ K K + + DV +A + Sbjct: 61 GKHDRQDKLFQANKCNPKFNLILGKYLKKEIKCRYCGGIIHSFEEKETDVRIATKILSDA 120 Query: 111 --EGLEHLVIFSGDGCFTTLVAALQRKV--KKVTIVSTVLSDPSMASDQLRRQAD 161 + + +I S D V ++ +KV + P+ S L +D Sbjct: 121 YKKRCDIAIIVSADSDLIPPVELIREFNPLQKVYV----YFPPNRYSSNLSNLSD 171 >gi|227834252|ref|YP_002835959.1| hypothetical protein cauri_2430 [Corynebacterium aurimucosum ATCC 700975] gi|227455268|gb|ACP34021.1| hypothetical protein cauri_2430 [Corynebacterium aurimucosum ATCC 700975] Length = 405 Score = 81.2 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 64/181 (35%), Gaps = 27/181 (14%) Query: 6 EKIALFIDGANL---YASSKALGF----DIDYRKLLKAFRS------RAIVIRAYYYTTV 52 E+ +F+D + L + +S G +ID +++ + S + R Y+Y + Sbjct: 3 ERTLVFVDTSYLLASFYNSWETGARAQLEIDLPEVVSSLGSMIENQVGNRIHRQYWYDGI 62 Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAF--EQS 110 ++ + D G Q+ E+ G +R + ++D L D Sbjct: 63 PDTGPHRYQRALRVCD-----GVQLRTGQLIEW----GERRTQKAVDTRLVADMIVSAMK 113 Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 + V+ SGD V +V + SM+S LR D L + Sbjct: 114 GQVTDFVLVSGDADMIPGVQEAVNNGVRVHLYGF--GWDSMSS-ALRHACDSTTILDPRE 170 Query: 171 N 171 + Sbjct: 171 D 171 >gi|311743916|ref|ZP_07717722.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272] gi|311313046|gb|EFQ82957.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272] Length = 325 Score = 81.2 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 35/215 (16%), Positives = 58/215 (26%), Gaps = 52/215 (24%) Query: 1 MFDP-REKIALFIDGANLYASS-------------------------------KALGFDI 28 M DP ++A++ID N+ S + + Sbjct: 1 MTDPGDPRVAVYIDFDNIVISRYDQVHGRHMWQRDKVRGYAPGEGGDTGDIGERLREATV 60 Query: 29 DYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTEN 88 D ++ S ++ Y ++ G V Sbjct: 61 DVGAVIDYASSFGTLVLTRAYADWSAPVNAEYRHQL--------VGRAVDLVQL-----F 107 Query: 89 CGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTV 145 K+ D+ LAVDA E L H+VI +GD + L +R + V + Sbjct: 108 PAAAYAKNGADIRLAVDAVEDMFRLPDLTHVVIVAGDSDYIALAQRCKRLGRYVVGI--- 164 Query: 146 LSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 S L D + L P + Sbjct: 165 -GVAGSTSKSLAAACDELVTYDALPGITPITPRQR 198 >gi|254819495|ref|ZP_05224496.1| hypothetical protein MintA_06199 [Mycobacterium intracellulare ATCC 13950] Length = 200 Score = 81.2 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 35/206 (16%), Positives = 61/206 (29%), Gaps = 46/206 (22%) Query: 1 MFDP-REKIALFIDGANLY-----------------------ASSKALGFDIDYRKLLKA 36 M +P ++A+++D N+ S + +D +L Sbjct: 5 MTEPVAARVAVYLDFDNIVISRYDQIHGRNSFQKDKAKGLEQHSERLGQATVDVGAILDY 64 Query: 37 FRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKS 96 S ++ Y D + F K+ Sbjct: 65 ASSFGTLVLTRAYADWSADINAGYRGQLVARAVDLVQLF-------------PAAAYGKN 111 Query: 97 SMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMAS 153 D+ LAVDA E L H+VI +GD + L +R + V + +S Sbjct: 112 GADIRLAVDAVEDMFRLPDLTHVVIVAGDSDYIPLAQRCKRLGRYVVGI----GVAGASS 167 Query: 154 DQLRRQADYFMDLAYL--KNEIARDP 177 L + F+ L + R+P Sbjct: 168 RALAAACEEFVVYDALPGVPALDREP 193 >gi|227505072|ref|ZP_03935121.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940] gi|227198337|gb|EEI78385.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940] Length = 419 Score = 81.2 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 64/181 (35%), Gaps = 27/181 (14%) Query: 6 EKIALFIDGANL---YASSKALGF----DIDYRKLLKAFRS------RAIVIRAYYYTTV 52 E+ +F+D + L + +S G +ID +++ S + R Y+Y + Sbjct: 3 ERTLVFVDTSYLLASFYNSWETGARAQLEIDLPEVVNNLGSMVENQLGNRIHRQYWYDGI 62 Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS-- 110 ++ D G Q+ E+ G +R + ++D L D + Sbjct: 63 PDTGPHRYQRALRTCD-----GVQLRTGQLIEW----GERRTQKAVDTRLVADMILAAMK 113 Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 + + V+ SGD V +V + SM+S LR D L + Sbjct: 114 QQVTDFVLVSGDADMIPGVQEAVNAGVRVHLYGF--GWDSMSS-ALRHACDTTTILDPRE 170 Query: 171 N 171 + Sbjct: 171 D 171 >gi|188992022|ref|YP_001904032.1| hypothetical protein xccb100_2627 [Xanthomonas campestris pv. campestris str. B100] gi|167733782|emb|CAP51987.1| Hypothetical protein xcc-b100_2627 [Xanthomonas campestris pv. campestris] Length = 266 Score = 80.8 bits (198), Expect = 7e-14, Method: Composition-based stats. Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 34/183 (18%) Query: 1 MFDPR----EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP 56 M + ++A+ +D N+ DI LL + +V+R Sbjct: 1 MSNSNSPLEPRVAVLVDCDNVPT-------DIVEHALLMVAQFGRVVLRR---------- 43 Query: 57 EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLE 114 + L + + ++ G K++ D+ LA+DA E + Sbjct: 44 --GYGNHSTLANKWQEVLVRQAFTPCLQYRYASG----KNTADIALALDALEALFDHRAD 97 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 + + D F+ L L+ + V IV D LR D F + E+A Sbjct: 98 TFCLVTSDSDFSYLCRKLRERGATVFIVGE-----PKTPDALRNACDQFFEWDRTAKEVA 152 Query: 175 RDP 177 Sbjct: 153 APE 155 >gi|302342036|ref|YP_003806565.1| hypothetical protein Deba_0599 [Desulfarculus baarsii DSM 2075] gi|301638649|gb|ADK83971.1| protein of unknown function DUF88 [Desulfarculus baarsii DSM 2075] Length = 200 Score = 80.8 bits (198), Expect = 7e-14, Method: Composition-based stats. Identities = 35/193 (18%), Positives = 70/193 (36%), Gaps = 15/193 (7%) Query: 4 PREKIALFIDGANLYASSKALG-FDIDYRKLLKAFRSRAIVIRAYYYTTVV-------GD 55 +++A+ IDG + G + + +L ++R YYY + + Sbjct: 2 HDKRVAVLIDGGYMDKILYEAGSMKVSFSRLANKLARGKPLLRTYYYHCLPHLSQRPTPE 61 Query: 56 PEQQFSPLHPLLDWLHYNG-FQVVAKVA--KEFTENCGRKRVKSSMDVELAVDA--FEQS 110 + ++ + L F+V + + R + +DV LAVD + Sbjct: 62 EQTFYANKERFFNALRRLDDFEVRLGHLAPRGWDNAGNRILEQKGVDVYLAVDVCRLSYT 121 Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA-YL 169 + +++ +GDG VA + KV + S + S+QL D L + Sbjct: 122 GSVSEIILVAGDGDLAPAVALAKDLGIKVCLW-FGESPSTRVSEQLWYICDQRRALDVAI 180 Query: 170 KNEIARDPDEDKK 182 E P +++ Sbjct: 181 LEECLLSPAPERR 193 >gi|296118467|ref|ZP_06837045.1| conserved hypothetical protein [Corynebacterium ammoniagenes DSM 20306] gi|295968366|gb|EFG81613.1| conserved hypothetical protein [Corynebacterium ammoniagenes DSM 20306] Length = 444 Score = 80.8 bits (198), Expect = 7e-14, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 65/181 (35%), Gaps = 27/181 (14%) Query: 6 EKIALFIDGANL---YASSKALGF----DIDYRKLLKAFRS------RAIVIRAYYYTTV 52 E+ +F+D + L + +S +G +ID +++ RS V R +Y + Sbjct: 3 ERTVVFVDTSYLLASFYNSWEIGARGQLEIDLPEVVATLRSMIENQIGHPVHRQNWYDGI 62 Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS-- 110 ++ D G Q+ E+ G +R + ++D L D + Sbjct: 63 PDTGPHRYQRALRTCD-----GVQLRTGQLIEW----GERRTQKAVDTRLVADMVVTAMN 113 Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 + V+ SGD V+ +V + SM+S LR D L + Sbjct: 114 QHFTDFVLVSGDADMIPGVSEATNNGMRVHLYGF--GWDSMSS-ALRHACDTTTILDPRE 170 Query: 171 N 171 + Sbjct: 171 D 171 >gi|150004082|ref|YP_001298826.1| hypothetical protein BVU_1517 [Bacteroides vulgatus ATCC 8482] gi|154491570|ref|ZP_02031196.1| hypothetical protein PARMER_01181 [Parabacteroides merdae ATCC 43184] gi|149932506|gb|ABR39204.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482] gi|154088371|gb|EDN87416.1| hypothetical protein PARMER_01181 [Parabacteroides merdae ATCC 43184] Length = 234 Score = 80.8 bits (198), Expect = 8e-14, Method: Composition-based stats. Identities = 24/169 (14%), Positives = 49/169 (28%), Gaps = 29/169 (17%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +A+ IDG N ++ + Y L Sbjct: 11 VAVLIDGDNASFE--------KMEDIMGFVSRYGDAVVRRIYGDWT------RKALSAWK 56 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCF 125 +GF++V + K++ D+ L +DA + + + + DG + Sbjct: 57 GIAREHGFRLV--------QASSHAPGKNTTDIALVIDAMDILRDGRADCFCLVASDGDY 108 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 + L ++ KV L R F+ +N ++ Sbjct: 109 SLLAQRIREAGLKVLGYGEDK-----TPVSLVRSCSVFLYADRKENRVS 152 >gi|51891180|ref|YP_073871.1| hypothetical protein STH42 [Symbiobacterium thermophilum IAM 14863] gi|51854869|dbj|BAD39027.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM 14863] Length = 264 Score = 80.8 bits (198), Expect = 8e-14, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 65/172 (37%), Gaps = 19/172 (11%) Query: 7 KIALFIDGANLYASSKA-LGFDIDYRKL---LKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 + +F+D N+Y S K G D +L L+ R + D E+ Sbjct: 2 RSVIFMDYENIYWSMKQQYGVAPDLDRLITSLREMGERGNGQVCLMHAYADFDHEE---- 57 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIF 119 L+ L + +K + + K++ D+E+++DA E ++ V+ Sbjct: 58 FRGLMSDLQRRSVEPRHVFSKNYEDGT----RKNAADIEMSLDALEIMYTRSDIDTFVLV 113 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 GD ++ L+ + K+V +V+ + S + + F + L Sbjct: 114 CGDRDMIQVIRKLRARGKQVHVVAVEKTM----SKDVMSFVNQFTTIEALLG 161 >gi|161789278|ref|YP_001595776.1| hypothetical protein BMSF_0033 [Vibrio sp. 09022] gi|161761499|gb|ABX77143.1| conserved hypothetical protein [Vibrio sp. 09022] Length = 297 Score = 80.4 bits (197), Expect = 8e-14, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 53/171 (30%), Gaps = 32/171 (18%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + A+ +DG N S Y+ +L+ + + + Y + + Sbjct: 1 MNSTLNFAVLVDGENAQPS--------KYQDILREVSQKGNIASKWVYADWTNPTHKSWK 52 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVI 118 + + + ++F K + D L +DA E S+ + + I Sbjct: 53 DIM----------LETGSAPKQQFHY------CKDAADHALIMDAIELICTSDKINAICI 96 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 S DG F L + K V V R+ F+ + + Sbjct: 97 VSSDGGFAGLAQRISEKGLHVMAVG-----KKDTPAAFRKACHNFVYVENI 142 >gi|118618529|ref|YP_906861.1| hypothetical protein MUL_3170 [Mycobacterium ulcerans Agy99] gi|118570639|gb|ABL05390.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length = 288 Score = 80.4 bits (197), Expect = 9e-14, Method: Composition-based stats. Identities = 37/207 (17%), Positives = 61/207 (29%), Gaps = 42/207 (20%) Query: 1 MFDP-REKIALFIDGANL-------------YASSKALGFD--------IDYRKLLKAFR 38 M D ++A++ D N+ + K+ G + +D ++ Sbjct: 1 MTDSSTSRVAVYFDFDNIVISRYEQVHGRNTFHRDKSKGLEQERLQLATVDLGAIIDFAS 60 Query: 39 SRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSM 98 S ++ Y D + G V K+ Sbjct: 61 SFGTLVLTRAYADWSADVNAGYHGQL--------VGRAVDLVQL-----FPAASYGKNGA 107 Query: 99 DVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQ 155 ++ LAVDA E L H+VI GD + L +R + V + +S Sbjct: 108 NIRLAVDAVEDMFRLPDLTHVVIVGGDSDYIALAQRCKRLGRYVVGI----GVAGASSGS 163 Query: 156 LRRQADYFMDLAYLKNEIARDPDEDKK 182 L D F+ L P KK Sbjct: 164 LAAACDEFVTYDALPGIPTLPPPAAKK 190 >gi|239813866|ref|YP_002942776.1| hypothetical protein Vapar_0857 [Variovorax paradoxus S110] gi|239800443|gb|ACS17510.1| protein of unknown function DUF88 [Variovorax paradoxus S110] Length = 275 Score = 80.4 bits (197), Expect = 9e-14, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 55/165 (33%), Gaps = 31/165 (18%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 P ++ L ID N+ A D+ + + + V Y +QQ Sbjct: 3 PSLRVMLLIDADNVSA-------DVIEQAVQRTLAEHGAVHVRRAYCNAETALKQQALFK 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSG 121 + + K+S D+ LAVDA + +E + +V+ S Sbjct: 56 RLSVRPMVNLS------------------AGKNSTDIALAVDALDLVIAERPDVVVLVSS 97 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 D F LV L+ K +V + ++ D F DL Sbjct: 98 DSDFAPLVIRLREKGCRVCGL----GQQGKTGEETVAVYDEFTDL 138 >gi|85717621|ref|ZP_01048561.1| hypothetical protein NB311A_09801 [Nitrobacter sp. Nb-311A] gi|85695548|gb|EAQ33466.1| hypothetical protein NB311A_09801 [Nitrobacter sp. Nb-311A] Length = 268 Score = 80.4 bits (197), Expect = 9e-14, Method: Composition-based stats. Identities = 32/191 (16%), Positives = 65/191 (34%), Gaps = 31/191 (16%) Query: 9 ALFIDGANLYASSKALG------FDIDYRKLLKAFRSR---------AIVIRAYYYTTVV 53 +F+D N+++S F D + L AF+ + Y V Sbjct: 7 GIFLDFDNVFSSLFKQSKEAAREFATDPARWLGAFQGMQGSENDETSHNFVIRRCYMNPV 66 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE---QS 110 G P +G++V+ + K+S D + +D + Sbjct: 67 GRVGNS-EPFSNFRQSFVRDGWEVIDTP-------PLTNQGKTSADTHIVMDVLDSVSHY 118 Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 ++ V+ + D +T LV L++ +K + + + S R D +D + Sbjct: 119 PHVDEYVLMAADADYTPLVIRLRKHMKTTVVYAAMQ-----TSMAYRAACDSIIDERSML 173 Query: 171 NEIARDPDEDK 181 + + +E K Sbjct: 174 EILEQKDEETK 184 >gi|296126610|ref|YP_003633862.1| hypothetical protein Bmur_1576 [Brachyspira murdochii DSM 12563] gi|296018426|gb|ADG71663.1| conserved hypothetical protein [Brachyspira murdochii DSM 12563] Length = 209 Score = 80.4 bits (197), Expect = 9e-14, Method: Composition-based stats. Identities = 36/192 (18%), Positives = 72/192 (37%), Gaps = 28/192 (14%) Query: 5 REKIALFIDGANLYASSKALG----FDIDYRKLLKAFRSRAIVIR-AYYYTTVVGDPEQQ 59 +K+ +IDG N+Y + L I+Y L K+ +I YY++ Sbjct: 1 MDKVNFYIDGFNIYHAIDRLNNNKLKWINYYDLCKSLLKDNEIINKVYYFSAYAFWKPYS 60 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTEN-------------CGRKRVKSSMDVELAVDA 106 + + + L Y +VV K+ ++N + DV +A+ Sbjct: 61 QNNHYIFIQALKYFNVEVVLGNFKKKSKNLIINDNNGNIIKYNYEYHEEKESDVNIAIYL 120 Query: 107 FEQS--EGLEHLVIFSGDGCFTTLVAALQRKV--KKVTIVSTVLSDPSMASDQLRRQADY 162 + + ++ SGD + + + KV +V P++ + L+ +D Sbjct: 121 VRDACKRNCDKAILLSGDSDLVPAIKMAKEENADLKVGVVV----PPNVQASSLKNISD- 175 Query: 163 FMDLAYLKNEIA 174 D+ LK +I+ Sbjct: 176 -FDIKLLKIDIS 186 >gi|294677711|ref|YP_003578326.1| hypothetical protein RCAP_rcc02189 [Rhodobacter capsulatus SB 1003] gi|294476531|gb|ADE85919.1| protein of unknown function DUF88 [Rhodobacter capsulatus SB 1003] Length = 249 Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 60/164 (36%), Gaps = 36/164 (21%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 E +A+ +DG NL S++ G ++ R+ V Y + Q P Sbjct: 1 METVAVLVDGDNL--SARYAG------QIALRARAFGTVTVRRVYLDAQKATDWQGGPQ- 51 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGD 122 GF++ + K++ D+ LA+DA E + ++ VI S D Sbjct: 52 ---------GFRL-----------MHAGKGKNASDLLLALDAMELALREGVKRFVIASSD 91 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 F+ L L+ ++VT + R + F+ L Sbjct: 92 RDFSHLALRLREYGRQVTGIGETK-----TPQIFRDACETFLTL 130 >gi|78047256|ref|YP_363431.1| hypothetical protein XCV1700 [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78035686|emb|CAJ23377.1| conserved hypothetical protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 266 Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 59/186 (31%), Gaps = 41/186 (22%) Query: 1 MFDPRE----KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP 56 M + ++A+ +D N+ DI LL + +V+R Sbjct: 1 MSNSNSPHEARVAVLVDCDNVPT-------DIVEHALLMVAQFGRVVLRR---------- 43 Query: 57 EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLE 114 + + L + + ++ G K++ D+ LA+DA E + Sbjct: 44 --GYGNHNTLANKWQEVLVRQAFTPCLQYQYASG----KNTADIALALDALEALFDSRAD 97 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 + + D F+ L L+ + V IV D LR D F E Sbjct: 98 TFCLVTSDSDFSYLCRKLRERGATVFIVGE-----PKTPDALRNACDQFF-------EWE 145 Query: 175 RDPDED 180 R E Sbjct: 146 RPAKEP 151 >gi|296268684|ref|YP_003651316.1| hypothetical protein Tbis_0698 [Thermobispora bispora DSM 43833] gi|296091471|gb|ADG87423.1| protein of unknown function DUF88 [Thermobispora bispora DSM 43833] Length = 304 Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 30/192 (15%), Positives = 63/192 (32%), Gaps = 31/192 (16%) Query: 3 DPREKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSR-------AIVIRAY 47 P K AL +D LYA++ F + +L+K+ + ++R Y Sbjct: 10 HPTSKFALLVDVGYLYAAAGEVLLGAKERKEFRVRADELIKSLQKHAAERIPGGELLRVY 69 Query: 48 YYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAF 107 +Y + L W K N + + +D ++ D Sbjct: 70 WYDAARDRVPTVDQRVIAQLPW------------VKVRLGNLNARGQQKGVDAQIRSDLE 117 Query: 108 EQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YF 163 + + ++ +GD V A Q +V + + +++L ++D Sbjct: 118 ALARHHAVSDTILIAGDEDMVPAVEAAQAYGVRVHLWGVEPPFGTNQAERLVWESDTVEI 177 Query: 164 MDLAYLKNEIAR 175 + +L+ R Sbjct: 178 LSADFLRPYFTR 189 >gi|76803018|ref|YP_331113.1| hypothetical protein NP4776A [Natronomonas pharaonis DSM 2160] gi|76558883|emb|CAI50479.2| conserved hypothetical protein [Natronomonas pharaonis DSM 2160] Length = 145 Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 35/163 (21%), Positives = 60/163 (36%), Gaps = 31/163 (19%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 ++ +F+DG N++ FD+D +L + A Y + L Sbjct: 12 RVGIFVDGPNVF----RAEFDVDLDELRALAGDEGTIAVARVYV--------DENASGGL 59 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124 + GF+VV +DV+LAVDA E + E ++ +V+ S D Sbjct: 60 IQAAEARGFEVVT--------------TSGDVDVKLAVDAVEAAVDEQVDTVVVVSRDTD 105 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F ++ ++ V+ SD LR A + L Sbjct: 106 FKPVLETAAKRGLHTVAVAPGTHGR---SDALRNAAHDEITLE 145 >gi|271961974|ref|YP_003336170.1| hypothetical protein Sros_0396 [Streptosporangium roseum DSM 43021] gi|270505149|gb|ACZ83427.1| hypothetical protein Sros_0396 [Streptosporangium roseum DSM 43021] Length = 393 Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 32/188 (17%), Positives = 64/188 (34%), Gaps = 31/188 (16%) Query: 5 REKIALFIDGANL-------YASSK-ALGFDIDYRKLLKAF------RSRAIVIRAYYYT 50 ++ ALF+D L ++ DY LLK R+ ++R Y+Y Sbjct: 1 MDRCALFVDAGYLLADGAMAVHGTRHREAVSWDYPGLLKLLGNLSKERTGLPLLRCYWYE 60 Query: 51 TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110 V + + + R + +D ++ D + Sbjct: 61 ASVEGRRTAEHDA-------------LADLPGLKLRLSRIRPGRREGVDAQVHRDLMTLA 107 Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL-- 166 + V+ SGD +V Q +VT+V S LR++ D +++ Sbjct: 108 RNSAVCDAVVVSGDEDLAQVVCDAQDLGIRVTVVHITADGSWAVSRSLRQECDDLIEIGS 167 Query: 167 AYLKNEIA 174 ++L+ ++ Sbjct: 168 SHLRPYVS 175 >gi|332527372|ref|ZP_08403428.1| hypothetical protein RBXJA2T_15598 [Rubrivivax benzoatilyticus JA2] gi|332111781|gb|EGJ11761.1| hypothetical protein RBXJA2T_15598 [Rubrivivax benzoatilyticus JA2] Length = 429 Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 31/196 (15%), Positives = 65/196 (33%), Gaps = 41/196 (20%) Query: 7 KIALFIDGANLYASSKAL------GFDIDYRKLLKAFRS------------RAIVIRAYY 48 K ALF+D N+++ + L F + + S R ++ Sbjct: 2 KSALFVDFDNVFSQLRQLQPDAAERFARHPSEWIGWLTSALALPEPHEDGERRRLLVRRC 61 Query: 49 YTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE 108 Y + GF++V + K+S D+ + +D + Sbjct: 62 YLNP--------NWYQTYRHAFLRAGFEIVDCP-------PVTSQGKTSTDIHMVLDIVD 106 Query: 109 QSEG---LEHLVIFSGDGCFTTLVAALQRKVKKVTI--VSTVLSDPSMASDQLRRQADYF 163 + + ++FS D FT ++ L+R ++ T+ + + ++D L D Sbjct: 107 LLQHETRCDEFIVFSADADFTPVLRKLRRYDRRTTVLAIGFPSAAYQASADLLI---DER 163 Query: 164 MDLAYLKNEIARDPDE 179 + L P+ Sbjct: 164 VFLRDALALAQPAPEA 179 >gi|83768358|dbj|BAE58497.1| unnamed protein product [Aspergillus oryzae] Length = 209 Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 32/102 (31%), Gaps = 11/102 (10%) Query: 70 LHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTT 127 + + ++F G K++ D + +DA + S + + S D FT Sbjct: 4 WKDQLLKQSIQPIQQFAYTHG----KNATDSAMIIDAMDLLYSSRYDGFCLVSSDSDFTR 59 Query: 128 LVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 L A ++ V + + F+ L Sbjct: 60 LAARIRESGLIVYGFGENHTPKPFVA-----ACSKFIYTENL 96 >gi|302341970|ref|YP_003806499.1| hypothetical protein Deba_0533 [Desulfarculus baarsii DSM 2075] gi|301638583|gb|ADK83905.1| protein of unknown function DUF88 [Desulfarculus baarsii DSM 2075] Length = 438 Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 25/184 (13%), Positives = 60/184 (32%), Gaps = 37/184 (20%) Query: 5 REKIALFIDGANLYASSKALGF---------------DIDYRKLLKAFRSRAIVIRAYYY 49 + IA++ D N+++S L + +D +++ S+ V Y Sbjct: 1 MKNIAVYWDFENIHSSLCNLRYGEDWLDQFRGQRHPAVVDIGAIMQFAESQGSVNINKAY 60 Query: 50 TTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ 109 ++ + + + F K+ D+ LA+DA + Sbjct: 61 GNWA------------WYQQYSHDLHEFTFDLVQLFPRGMNM---KNGADIRLAIDALDD 105 Query: 110 SEGLEH---LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 EH +I GD + +L ++++ K++ + + + F Sbjct: 106 LNRHEHLSVFIIVGGDSDYISLAQRVRQRGKEIIGI----GVRETTNKFWINACNDFRFY 161 Query: 167 AYLK 170 + + Sbjct: 162 SSIA 165 >gi|240171215|ref|ZP_04749874.1| hypothetical protein MkanA1_18021 [Mycobacterium kansasii ATCC 12478] Length = 289 Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 56/187 (29%), Gaps = 41/187 (21%) Query: 7 KIALFIDGANLYAS-----------SKALGFDIDYRKL----------LKAFRSRAIVIR 45 ++A++ D N+ S K G +D +L + S ++ Sbjct: 8 RVAVYFDFDNIVISRYDQVHGRGTFQKDKGKGLDPERLRAATVDLGAIMDFASSFGTLVL 67 Query: 46 AYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVD 105 Y + ++ G V K+ D+ LAVD Sbjct: 68 TRAYADWSAEVNARYHGQL--------VGRAVDLVQL-----FPAAAYGKNGADIRLAVD 114 Query: 106 AFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162 A E L H+VI GD + L +R + V + +S L D Sbjct: 115 AVEDMFRLPDLTHVVIVGGDSDYIALAQRCKRLGRYVVGI----GVAGASSQSLAAACDE 170 Query: 163 FMDLAYL 169 F+ L Sbjct: 171 FVTYDTL 177 >gi|149203752|ref|ZP_01880721.1| hypothetical protein RTM1035_06788 [Roseovarius sp. TM1035] gi|149142869|gb|EDM30911.1| hypothetical protein RTM1035_06788 [Roseovarius sp. TM1035] Length = 232 Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 29/172 (16%), Positives = 57/172 (33%), Gaps = 37/172 (21%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 P +++ F+D N+ + +D L ++RAY ++ D ++ Sbjct: 9 LTPAPRLSAFVDAENIPVT--HARTILD----LARRYGDPDLLRAYGNVGLLSDWDK--- 59 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIF 119 +F + K++ D+ + VDA E S+ +++ Sbjct: 60 ------------------LPGFQFIHSG---CGKNATDMLICVDAMERALSDQCAAVLLV 98 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 S D FT L L+ V S++ R F +L + Sbjct: 99 SSDQDFTHLATRLRGYGLTVIGAGEAK-----TSERFRAACSVFEELEGCRE 145 >gi|119486459|ref|ZP_01620517.1| hypothetical protein L8106_00655 [Lyngbya sp. PCC 8106] gi|119456361|gb|EAW37492.1| hypothetical protein L8106_00655 [Lyngbya sp. PCC 8106] Length = 428 Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 57/162 (35%), Gaps = 13/162 (8%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +A+F D NL + I+ L F + R + L + Sbjct: 5 VAIFYDIENLLKGYGSSQNYINSISLKYVFNKIKSIERVEFIAVQRAYANWSDPRLSVMK 64 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGC 124 ++ G + F R K++ D++LAVDA + + +E VI SGDG Sbjct: 65 GEINELGID----PIQIF--GFSRNTHKNAADIQLAVDAIDLAYLRNYIEIFVIVSGDGG 118 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 F+ L L K V + + + D F+ + Sbjct: 119 FSALAKKLHEYGKYVIGCA----YFNATNKIFESVCDVFIGI 156 >gi|315608482|ref|ZP_07883469.1| conserved hypothetical protein [Prevotella buccae ATCC 33574] gi|315249808|gb|EFU29810.1| conserved hypothetical protein [Prevotella buccae ATCC 33574] Length = 239 Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 25/157 (15%), Positives = 47/157 (29%), Gaps = 29/157 (18%) Query: 9 ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68 A+ IDG N+ ++ LG ++ S I Y +++ Sbjct: 15 AILIDGDNV--AADKLG------DIISFVSSYGNPIIRRIYADWTKSAMKRWK------- 59 Query: 69 WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCFT 126 F A + K++ D+ L +DA + ++ I S D +T Sbjct: 60 -EEAKTFSFRLVEALSYVGM------KNTTDMALVIDAMDLLHGKTVQGFCIVSSDSDYT 112 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163 L ++ + V L+ F Sbjct: 113 LLAQRIREEGLLVLGYGEQK-----TPASLQNSCHEF 144 >gi|258510539|ref|YP_003183973.1| hypothetical protein Aaci_0532 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257477265|gb|ACV57584.1| protein of unknown function DUF88 [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 321 Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 32/196 (16%), Positives = 68/196 (34%), Gaps = 37/196 (18%) Query: 3 DPREKIALFIDGANLYASS-KALGFDID--------YRKLLKAFRSRAIVIRAYYYTTVV 53 D + +A+F+D N+Y + D + KL + +R + Sbjct: 50 DKMDNVAIFVDYDNVYWTLYNNYRHHPDHGDDDKNLFVKLWDFY--GRDNVRIFKAYADF 107 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--- 110 + + L + + + + K++ D+EL++DA E + Sbjct: 108 EQIKSDLTRLQKRRVQIRH-----------VYANGKTEQGRKNASDIELSIDAIELTHTD 156 Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD------YFM 164 + VI + D L++ L K K+V + + LR A F+ Sbjct: 157 PEITCYVIVTADSDMIPLMSRLMYKGKRVELFYIESALAKHT--DLRNYAHISRDLITFL 214 Query: 165 DLA----YLKNEIARD 176 ++ ++++IA Sbjct: 215 NVDTTPIDIRDKIAEA 230 >gi|319791587|ref|YP_004153227.1| hypothetical protein Varpa_0898 [Variovorax paradoxus EPS] gi|315594050|gb|ADU35116.1| protein of unknown function DUF88 [Variovorax paradoxus EPS] Length = 279 Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 58/167 (34%), Gaps = 31/167 (18%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 P ++ L ID N+ A D+ + + + V Y +Q Sbjct: 12 PTLRVMLLIDADNVSA-------DVIEQAVQRTMDEYGAVHVRRAYCNAEMAVNRQALFK 64 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSG 121 + + K+S D+ LAVDA + +E + +V+ S Sbjct: 65 QLSVRPMVNLS------------------AGKNSTDIALAVDAIDLVIAERPDVVVLVSS 106 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 D F LV+ L+ K +V + D+ D F+DLA+ Sbjct: 107 DSDFAPLVSRLREKGCRVCGI----GQQGKTGDETVGIYDTFIDLAH 149 >gi|303244983|ref|ZP_07331306.1| protein of unknown function DUF88 [Methanothermococcus okinawensis IH1] gi|302484635|gb|EFL47576.1| protein of unknown function DUF88 [Methanothermococcus okinawensis IH1] Length = 238 Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats. Identities = 27/164 (16%), Positives = 57/164 (34%), Gaps = 32/164 (19%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 ++AL +DG N+ F+ID K+ + ++ Y L Sbjct: 22 RMALLVDGPNM----LRKEFNIDLDKIREVLDEFGTIVIGRVYLN--------QYASDKL 69 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124 ++ + GF+ +DVE+AV+ E ++ +V + D Sbjct: 70 IEAIANQGFEPRI--------------SAGDVDVEMAVEGTELIFNNNIDTIVYMTRDAD 115 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F + + KK+ ++ S ++ AD+ + + Sbjct: 116 FLPAIRKAKEHGKKIIVIGAEPGF----STAIQNIADHVIKIEE 155 >gi|25809033|gb|AAN74629.1| hypothetical protein [Gram-negative bacterium 0471] Length = 306 Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 27/171 (15%), Positives = 53/171 (30%), Gaps = 32/171 (18%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + A+ +DG N S Y+ +L+ + + + Y + + Sbjct: 1 MNSTLNFAVLVDGENAQPS--------KYQDILREVSQKGNIASKWVYADWTNPTHKSWK 52 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVI 118 + + + ++F K + D L +DA E S+ + + I Sbjct: 53 DIM----------LETGSAPKQQFHY------CKDAADHALIMDAIELICTSDKINAICI 96 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 S DG F L + K V V R+ F+ + + Sbjct: 97 VSSDGGFAGLAQRISEKGLHVMAVG-----KKDTPAAFRKACHNFVYVENI 142 >gi|325851759|ref|ZP_08170981.1| hypothetical protein HMPREF9303_0793 [Prevotella denticola CRIS 18C-A] gi|325484715|gb|EGC87625.1| hypothetical protein HMPREF9303_0793 [Prevotella denticola CRIS 18C-A] Length = 239 Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 49/158 (31%), Gaps = 29/158 (18%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 IA+ IDG N+ ++ LG ++ S I Y +++ Sbjct: 14 IAILIDGDNV--AADKLG------DIISFVSSYGNPIIRRIYADWTKSAMKRWK------ 59 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCF 125 F A + VK++ D+ L ++A + ++ I S D + Sbjct: 60 --EEAKTFSFRLVEALSYVG------VKNTTDMALVIEAMDLLHGKTVQGFCIVSSDSDY 111 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163 T L ++ + V L+ F Sbjct: 112 TLLAQRIREEGLLVLGYGEQK-----TPASLQNSCHEF 144 >gi|169825423|ref|YP_001695598.1| hypothetical protein Bsph_p009 [Lysinibacillus sphaericus C3-41] gi|168994700|gb|ACA42239.1| conserved hypothetical protein [Lysinibacillus sphaericus C3-41] Length = 181 Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 28/173 (16%), Positives = 66/173 (38%), Gaps = 14/173 (8%) Query: 5 REKIALFIDGANLYASSKALGFD-ID----YRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 +K A+ +D N+ + LG + + + L+ + ++A+Y V + + Sbjct: 1 MKKTAILVDEMNVIQQLRRLGIHGFNPWNAFYQALQRWNGDKKGVKAFYCANVPKEDAEH 60 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG-LEHLVI 118 + + L + +V + +R+ +DV LA+D E + ++ + I Sbjct: 61 EKR-NNFFEGLINHNIKVSVGTVV---YDSNSRRIAKGVDVALALDIVEHARSGVQDIFI 116 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 +GD + Q +V +V ++ + + AD + L + Sbjct: 117 CTGDADVVPAIIRAQELGSRVHVVV----SRAIPAKNITLAADSVVRLEDILE 165 >gi|303325412|ref|ZP_07355855.1| conserved hypothetical protein [Desulfovibrio sp. 3_1_syn3] gi|302863328|gb|EFL86259.1| conserved hypothetical protein [Desulfovibrio sp. 3_1_syn3] Length = 228 Score = 78.9 bits (193), Expect = 2e-13, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 65/189 (34%), Gaps = 30/189 (15%) Query: 9 ALFIDGANLYA--------SSKALG----FDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP 56 AL++D N+Y +++ G + + + +R + Sbjct: 27 ALYVDFDNIYTRFLEADPEAARTFGSAPYRWVRWIENHALRILYGEGVRRR---ILKRMC 83 Query: 57 EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE---QSEGL 113 + + FQVV R K+S D+ L +D + S Sbjct: 84 YLNPQRYQEFRNPFIRSAFQVVDCP-------PLTSRGKTSTDIHLVMDCMDDLSHSTHF 136 Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 + +I SGD FT L+ LQ ++ ++S S P+ + A + + + + Sbjct: 137 DEFIILSGDADFTPLLIRLQEHARRTLVLSVGYSSPAYTA-----AASWRIREDWFLQQA 191 Query: 174 ARDPDEDKK 182 +D D + Sbjct: 192 LKDDRSDDE 200 >gi|258648761|ref|ZP_05736230.1| conserved hypothetical protein [Prevotella tannerae ATCC 51259] gi|260851088|gb|EEX70957.1| conserved hypothetical protein [Prevotella tannerae ATCC 51259] Length = 238 Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 28/168 (16%), Positives = 56/168 (33%), Gaps = 18/168 (10%) Query: 3 DPREKIALFIDGANLYASSK-----ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 + ++++ ++IDG N Y K + +D KL ++F + A Y + D Sbjct: 24 EEKQRVIVYIDGFNFYYGLKFTARWRKYYWLDVVKLFESFMRPNQELIAVKYFSAKPDDI 83 Query: 58 QQFSPLHPLLDWLHYNGF------QVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQS 110 +Q + N + + K F + DV +A + Sbjct: 84 EQSRRQNAFFQANKENPKFRLILGKYLKKEITCFKCKNVIHTYEEKETDVRIATQIVADA 143 Query: 111 --EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 + + ++ S D + + +KV V P+ S L Sbjct: 144 YQKNCDVAIVVSADSDMVPAIELATQARQKV----FVYFPPNQYSSNL 187 >gi|282895639|ref|ZP_06303764.1| hypothetical protein CRD_00263 [Raphidiopsis brookii D9] gi|281199333|gb|EFA74198.1| hypothetical protein CRD_00263 [Raphidiopsis brookii D9] Length = 96 Score = 78.9 bits (193), Expect = 3e-13, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 4/83 (4%) Query: 94 VKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMAS 153 +++VE+AVD + + V+ SGDG V A+ +V ++ +M S Sbjct: 3 KNPNLNVEIAVDMITLAPYYDTAVLVSGDGDLAYAVNAVTSLGSRVEVI----GLQTMTS 58 Query: 154 DQLRRQADYFMDLAYLKNEIARD 176 D L ADYF+D +K I +D Sbjct: 59 DSLIDVADYFIDFDSIKQYIQKD 81 >gi|145225022|ref|YP_001135700.1| hypothetical protein Mflv_4443 [Mycobacterium gilvum PYR-GCK] gi|145217508|gb|ABP46912.1| protein of unknown function DUF88 [Mycobacterium gilvum PYR-GCK] Length = 329 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 39/204 (19%), Positives = 65/204 (31%), Gaps = 45/204 (22%) Query: 7 KIALFIDGANLYASS-------------KALGFD----------IDYRKLLKAFRSRAIV 43 ++A+++D N+ S KA GFD +D ++ S + Sbjct: 35 RVAVYLDFDNIVLSRYDQVNGRNSFQRDKAKGFDEVRDKLDRATVDVGAIIDFASSFGTL 94 Query: 44 IRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELA 103 + Y + ++ G V K+ D+ LA Sbjct: 95 VLTRAYADWSAEINARYRGQL--------VGRAVDLVQL-----FPAAAYGKNGADIRLA 141 Query: 104 VDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160 VDA E L H+VI +GD + L +R + V + +S L Sbjct: 142 VDAVEDMFRLPDLTHVVIVAGDSDYIALAQRCKRLGRYVVGI----GVAGSSSRMLAAAC 197 Query: 161 DYFMDLAYL--KNEIARDPDEDKK 182 D F+ L +P D+K Sbjct: 198 DEFVTYDTLPGVPVFEPEPVADEK 221 >gi|312136340|ref|YP_004003677.1| hypothetical protein Mfer_0112 [Methanothermus fervidus DSM 2088] gi|311224059|gb|ADP76915.1| protein of unknown function DUF88 [Methanothermus fervidus DSM 2088] Length = 174 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 26/175 (14%), Positives = 58/175 (33%), Gaps = 32/175 (18%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 I L +DG N+ F ++ ++ + + VG L+ Sbjct: 28 IGLLVDGPNM----LRKEFKLNLEQVKEILSEYGNL--------KVGKVLLNQYASDKLI 75 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCF 125 + + GF + V DV +A++A E ++ + + + D F Sbjct: 76 EAISNQGFSPIV--------------VAGDTDVYMAIEAMELIYNPNIDIIALMTRDADF 121 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 ++ + K+ ++ S L+ AD+ + L K + ++ Sbjct: 122 LPIINKAKENGKETIVIGAEPGF----SVALKNAADHTIILRSKKEGNEDEDSKN 172 >gi|323359351|ref|YP_004225747.1| hypothetical protein MTES_2903 [Microbacterium testaceum StLB037] gi|323275722|dbj|BAJ75867.1| uncharacterized conserved protein [Microbacterium testaceum StLB037] Length = 286 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 31/195 (15%), Positives = 52/195 (26%), Gaps = 48/195 (24%) Query: 6 EKIALFIDGANLYASS----------------------------KALGFDIDYRKLLKAF 37 ++A+++D N+ S + ID ++ Sbjct: 7 PRVAVYLDFDNIVMSWYDRVHGRNAYSRDRQKIAENPMDPEIAERLTKATIDVGAVIDYA 66 Query: 38 RSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSS 97 S ++ Y ++ F K+ Sbjct: 67 ASFGTLVLTRAYADWSAPVNAEYRSQLVARAVDLVQLF-------------PAAAYAKNG 113 Query: 98 MDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASD 154 D+ LAVDA E L H+VI +GD + L +R + V V + Sbjct: 114 ADIRLAVDAVEDMFRLPDLTHVVIVAGDSDYVPLAQRCKRLGRYVVGV----GVAGSTAK 169 Query: 155 QLRRQADYFMDLAYL 169 L D F L Sbjct: 170 SLAAACDRFDSYDSL 184 >gi|307320472|ref|ZP_07599888.1| protein of unknown function DUF88 [Sinorhizobium meliloti AK83] gi|306893885|gb|EFN24655.1| protein of unknown function DUF88 [Sinorhizobium meliloti AK83] Length = 259 Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 24/156 (15%), Positives = 42/156 (26%), Gaps = 29/156 (18%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +AL IDG N S LL + + G + + Sbjct: 6 LALLIDGDNASPSI--------VTGLLAEIANYGVASVKRINGDWTGPNLKGWK------ 51 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCF 125 + + ++F G K++ D + ++A + + I S D F Sbjct: 52 ----DCLVEHSIQRVQQFAYTTG----KNATDGAMIIEAMDLLYTGRFSGFCIVSSDSDF 103 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 L A L + V + D Sbjct: 104 ARLAARLPEQGVAVYGFGERKTPRP-----FVTACD 134 >gi|72163404|ref|YP_291061.1| hypothetical protein Tfu_3005 [Thermobifida fusca YX] gi|71917136|gb|AAZ57038.1| hypothetical protein Tfu_3005 [Thermobifida fusca YX] Length = 516 Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 30/187 (16%), Positives = 60/187 (32%), Gaps = 31/187 (16%) Query: 5 REKIALFIDGANL-------YASSK-ALGFDIDYRKLLKAFRSRAI------VIRAYYYT 50 ++ ALF+D L ++ DY L++ A +R Y+Y Sbjct: 1 MDRCALFVDAGYLLAEGAMAVHGTRDRDSVSWDYAALVQLLNEVARDRTGLPPLRCYWYE 60 Query: 51 TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110 V Q + +F R + ++ + D + Sbjct: 61 AVTDSRRSQEQEG-------------IAEIPGVKFRAARIRPGRREGVENYVQKDLIPLA 107 Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL-- 166 + V+ GD ++A Q +VT+V + S LR + D +++ Sbjct: 108 RNRAICDAVLVCGDEDMAPVIAEAQEYGVRVTVVHISIEGNWTVSRALRHECDDLIEIGA 167 Query: 167 AYLKNEI 173 +L+ + Sbjct: 168 GHLRPHV 174 >gi|297192241|ref|ZP_06909639.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC 25486] gi|297151272|gb|EDY63689.2| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC 25486] Length = 312 Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 61/188 (32%), Gaps = 31/188 (16%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53 A+F+D +YA++ L FD+D L++AF +A ++R Y+Y Sbjct: 48 AIFVDAGYVYAAAGLLVAGTEDRRSFDLDAEGLIEAFIDKARTIFADSRLLRVYWYDGAR 107 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 L K N + +D + D + Sbjct: 108 RRIHTSEQQAIAELP------------DVKVRLGNLNANNQQKGVDSLIRTDLESLARHR 155 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169 + + GD + V A Q +V + + ++ L + D DL + Sbjct: 156 AISDAALVGGDEDLVSAVEAAQGYGARVHLWGIEAGEGRNQAEPLLWEVDSQRTFDLDFC 215 Query: 170 KNEIARDP 177 + I R P Sbjct: 216 RPYITRRP 223 >gi|126433513|ref|YP_001069204.1| hypothetical protein Mjls_0904 [Mycobacterium sp. JLS] gi|126233313|gb|ABN96713.1| protein of unknown function DUF88 [Mycobacterium sp. JLS] Length = 311 Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 32/189 (16%), Positives = 53/189 (28%), Gaps = 43/189 (22%) Query: 7 KIALFIDGANLYASS-----------------------KALGFDIDYRKLLKAFRSRAIV 43 ++A+++D N+ S K +D ++ S + Sbjct: 14 RVAVYLDFDNIVISRYDQVHGRSSYQKDKTKDPDDFADKLQRATVDIGAVIDFASSFGTL 73 Query: 44 IRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELA 103 + Y D + F K+ D+ LA Sbjct: 74 VLTRAYADWSSDVNANYRGQLVARAVDLVQLF-------------PAAAYGKNGADIRLA 120 Query: 104 VDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160 VDA E L H+VI GD + L +R + V + +S L Sbjct: 121 VDAVEDMFRLPDLTHVVIVGGDSDYIALAQRCKRLGRYVVGI----GVAGASSRSLAAAC 176 Query: 161 DYFMDLAYL 169 D F+ L Sbjct: 177 DEFVTYDAL 185 >gi|120402029|ref|YP_951858.1| hypothetical protein Mvan_1014 [Mycobacterium vanbaalenii PYR-1] gi|119954847|gb|ABM11852.1| protein of unknown function DUF88 [Mycobacterium vanbaalenii PYR-1] Length = 299 Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 32/204 (15%), Positives = 58/204 (28%), Gaps = 45/204 (22%) Query: 7 KIALFIDGANLY-----------------------ASSKALGFDIDYRKLLKAFRSRAIV 43 ++A+++D N+ + + +D ++ S + Sbjct: 8 RVAVYLDFDNIVISRYDQVNGRNSFQRDKAKGPDDWAERVARATVDVGAIIDFASSFGTL 67 Query: 44 IRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELA 103 + Y + + F K+ D+ LA Sbjct: 68 VLTRAYADWSVEINAGYRGQLVQRAVDLVQLF-------------PAAAYGKNGADIRLA 114 Query: 104 VDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160 VDA E L H+VI GD + L +R + V + +S L Sbjct: 115 VDAVEDMFRLPDLTHVVIVGGDSDYIALAQRCKRLGRYVVGI----GVAGSSSRMLAAAC 170 Query: 161 DYFMDLAYL--KNEIARDPDEDKK 182 D F+ L + P D+K Sbjct: 171 DEFVTYDALPGIPVMEPPPVADEK 194 >gi|322436968|ref|YP_004219180.1| hypothetical protein AciX9_3394 [Acidobacterium sp. MP5ACTX9] gi|321164695|gb|ADW70400.1| hypothetical protein AciX9_3394 [Acidobacterium sp. MP5ACTX9] Length = 275 Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 64/183 (34%), Gaps = 32/183 (17%) Query: 5 REKIALFIDGANLY---------ASSKALGFDIDYRKLLKAFRS-------RAIVIRAYY 48 ++ A+F+D LY A++ +D +L+ +S A ++R Y+ Sbjct: 1 MQRNAVFVDAGYLYSQSAVSLTGANAARPSLRLDEAELINQLKSLALNLSAGAQLLRIYW 60 Query: 49 YTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE 108 Y + L + D K + + +D L D + Sbjct: 61 YDGAKNGMTAEQLVLADMAD-------------VKVRLGSINSAGQQKGVDSLLVTDLID 107 Query: 109 QSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 + + VI +GDG V Q +V +V S + S LR++AD ++ Sbjct: 108 LARNQAISDAVIVTGDGDMRVAVQIAQSFGVRVHLVGLEPSS-ASQSQLLRQEADTVHEI 166 Query: 167 AYL 169 + Sbjct: 167 PKI 169 >gi|315637785|ref|ZP_07892977.1| conserved hypothetical protein [Campylobacter upsaliensis JV21] gi|315482128|gb|EFU72740.1| conserved hypothetical protein [Campylobacter upsaliensis JV21] Length = 220 Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 28/174 (16%), Positives = 51/174 (29%), Gaps = 32/174 (18%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRK-LLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 + +A+FID N+ Y K + S +I Y + Sbjct: 3 NKSVAIFIDAENI---------SFKYAKDIFNIASSYGELIIKRIYADWRSPALSGWKDE 53 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSG 121 + F+ K+S D+ L DA + +E +I S Sbjct: 54 IAEHSIIAIQNFKF---------------NRKNSSDMHLMADAMSIFYEKDVEIFIIVSS 98 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 D + L L+ K+V + ++ S F L + + + Sbjct: 99 DSDYIPLTQKLRESKKQVIGMGENKANKSY-----INAFSAFHYLDKKEEKSDK 147 >gi|121596271|ref|YP_988167.1| hypothetical protein Ajs_3985 [Acidovorax sp. JS42] gi|120608351|gb|ABM44091.1| protein of unknown function DUF88 [Acidovorax sp. JS42] Length = 179 Score = 78.5 bits (192), Expect = 4e-13, Method: Composition-based stats. Identities = 24/158 (15%), Positives = 55/158 (34%), Gaps = 23/158 (14%) Query: 23 ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVA 82 + ID+ KL + +++ L NGF+V+ Sbjct: 40 DYNWKIDFGKLFQFAGGDRNLVKKAGLFGSRPPKNDS------LWTAAEKNGFEVI---- 89 Query: 83 KEFTENCGRKRVKSSMDVELAVDAFEQSEGL-----EHLVIFSGDGCFTTLVAALQRKVK 137 + + +D ++ E S + + + + SGD + + L+++ Sbjct: 90 ---VYDRNIAGHEKKIDTDIVATMIEDSYEILTIGQDEITLVSGDSDYVPAIEKLKKRGI 146 Query: 138 KVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 V +V A+ +L+ A F++L + +A+ Sbjct: 147 PVHVV-----FWGHAARELKEVATKFVNLDPYLDHLAK 179 >gi|269128328|ref|YP_003301698.1| hypothetical protein Tcur_4132 [Thermomonospora curvata DSM 43183] gi|268313286|gb|ACY99660.1| protein of unknown function DUF88 [Thermomonospora curvata DSM 43183] Length = 333 Score = 78.1 bits (191), Expect = 4e-13, Method: Composition-based stats. Identities = 32/190 (16%), Positives = 63/190 (33%), Gaps = 30/190 (15%) Query: 7 KIALFIDGANLYASSKAL--------GFDIDYRKLLKAFRS------RAIVIRAYYYTTV 52 + A+F+D LYA+S AL + + +L+ A R ++R Y++ Sbjct: 12 RYAVFVDAGYLYAASGALLLDATSRREYRVAAEQLINALIDYAAKELRGELLRVYWFDAA 71 Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG 112 + L K N + + +D +L D + Sbjct: 72 PRRQPTVDQRVIANLP------------RVKLRLGNLNAQGQQKGVDAQLRADLEALARH 119 Query: 113 --LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAY 168 + V+ +GD V A QR V + + S ++ L ++D + + Sbjct: 120 RAITDAVLLAGDEDMLPAVEAAQRYGVLVHLWGVEPTHGSNQAEWLVWESDTVEVLSADF 179 Query: 169 LKNEIARDPD 178 L+ + Sbjct: 180 LRPYFTKAKA 189 >gi|15639879|ref|NP_219329.1| hypothetical protein TP0894 [Treponema pallidum subsp. pallidum str. Nichols] gi|189026117|ref|YP_001933889.1| hypothetical protein TPASS_0894 [Treponema pallidum subsp. pallidum SS14] gi|3323212|gb|AAC65851.1| conserved hypothetical protein [Treponema pallidum subsp. pallidum str. Nichols] gi|189018692|gb|ACD71310.1| hypothetical protein TPASS_0894 [Treponema pallidum subsp. pallidum SS14] gi|291060253|gb|ADD72988.1| conserved hypothetical protein [Treponema pallidum subsp. pallidum str. Chicago] Length = 340 Score = 78.1 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 22/171 (12%), Positives = 50/171 (29%), Gaps = 32/171 (18%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +K AL IDG N+ ++ + Y + L Sbjct: 2 EKKFALLIDGDNI--------SPKFLEGIVGEVSKEGDIHVRRVYGDWTTPNMNGWKGLL 53 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG---LEHLVIFSG 121 ++ + ++F ++ D + ++A E + + + I S Sbjct: 54 T----------KIPIRPVQQFRYG------DNATDNTIIMEAIELANNNRAINAVCIAST 97 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 D + +L L+ V + + S + F + ++ E Sbjct: 98 DSDYYSLALKLREYGLYVLGIGKRNAREIWVS-----ACNEFKYIENIETE 143 >gi|116672106|ref|YP_833039.1| hypothetical protein Arth_3564 [Arthrobacter sp. FB24] gi|116612215|gb|ABK04939.1| hypothetical protein Arth_3564 [Arthrobacter sp. FB24] Length = 415 Score = 78.1 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 35/170 (20%), Positives = 63/170 (37%), Gaps = 27/170 (15%) Query: 7 KIALFIDGANLYASSKAL------GFDIDYRKLLKAFRSRA--IVIRAYYYTTVVGDPEQ 58 + A+F+D N+Y AL F D + A + R + ++ + Sbjct: 14 RAAMFVDFDNVYTGLLALDPLAAKRFAEDPKHWADALSAGGSAESSRRF----LIRNCYL 69 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEH 115 + GF+V+ +R KSS D+ L +DA + S G++ Sbjct: 70 NPVVYSKYRTYWTRAGFRVIDCP-------SLTQRGKSSTDINLVLDAMDALSGSAGIDE 122 Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165 I S D FT+L+ + K T+++ + R AD ++ Sbjct: 123 FFIASADADFTSLIQRFRAADKMTTVIA-----AGAVAFAYREMADSVVE 167 >gi|108797873|ref|YP_638070.1| hypothetical protein Mmcs_0898 [Mycobacterium sp. MCS] gi|119866967|ref|YP_936919.1| hypothetical protein Mkms_0915 [Mycobacterium sp. KMS] gi|108768292|gb|ABG07014.1| protein of unknown function DUF88 [Mycobacterium sp. MCS] gi|119693056|gb|ABL90129.1| protein of unknown function DUF88 [Mycobacterium sp. KMS] Length = 311 Score = 78.1 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 32/189 (16%), Positives = 53/189 (28%), Gaps = 43/189 (22%) Query: 7 KIALFIDGANLYASS-----------------------KALGFDIDYRKLLKAFRSRAIV 43 ++A+++D N+ S K +D ++ S + Sbjct: 14 RVAVYLDFDNIVISRYDQVHGRSSYQKDKTKDPDDFADKLQRATVDIGAVIDFASSFGTL 73 Query: 44 IRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELA 103 + Y D + F K+ D+ LA Sbjct: 74 VLTRAYADWSSDVNANYRGQLVARAVDLVQLF-------------PAAAYGKNGADIRLA 120 Query: 104 VDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160 VDA E L H+VI GD + L +R + V + +S L Sbjct: 121 VDAVEDMFRLPDLTHVVIVGGDSDYIALAQRCKRLGRYVVGI----GVAGASSRSLAAAC 176 Query: 161 DYFMDLAYL 169 D F+ L Sbjct: 177 DEFVTYDAL 185 >gi|85859964|ref|YP_462166.1| putative cytoplasmic protein [Syntrophus aciditrophicus SB] gi|85723055|gb|ABC77998.1| hypothetical cytosolic protein [Syntrophus aciditrophicus SB] Length = 196 Score = 78.1 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 40/177 (22%), Positives = 76/177 (42%), Gaps = 28/177 (15%) Query: 7 KIALFIDGANLYASSKA------LGFDIDYRK---LLKAFRS-----RAIVIRAYYYTTV 52 + +F+DG NL KA +D+ + + F + VIR YYYT V Sbjct: 16 RAMVFVDGENLAIRYKAGLADAPPEKHVDFLQDVYVWSHFANIPYHVHCDVIRKYYYTAV 75 Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG 112 GD + ++ + + + + F + GR +D+ +A + + Sbjct: 76 QGDDPK--------IEDVETQLKNIGIEAPRVFKKKKGRPT--KRVDITIATEMLTHAHR 125 Query: 113 --LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 + ++ +GD + LV A+Q + ++V ++ DP + S +L ADYF D++ Sbjct: 126 GNYDIAILVAGDEDYVPLVKAVQDEGRRV-VLWFFEGDPGL-SKKLEMAADYFFDIS 180 >gi|312141909|ref|YP_004009245.1| hypothetical protein REQ_46160 [Rhodococcus equi 103S] gi|311891248|emb|CBH50567.1| conserved hypothetical protein [Rhodococcus equi 103S] Length = 339 Score = 78.1 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 33/171 (19%), Positives = 53/171 (30%), Gaps = 30/171 (17%) Query: 10 LFIDGANLYASS--------KALGFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGD 55 L+ID L AS+ G +DY KL+ + A V+R ++Y + Sbjct: 18 LYIDAGYLLASAATRVTGTSLRGGIHVDYAKLVSSLVDAAQARSGLPVLRVHWYDSARNG 77 Query: 56 PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--L 113 G K G + +D+ + +D + Sbjct: 78 VPDPQQ---------ERIG---ELSKVKLRLGRFGVNGEQKGVDLRIGLDLVAHARNGAS 125 Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVST--VLSDPSMASDQLRRQADY 162 + + SGD T V Q +V + + P S L R AD Sbjct: 126 DVFFLVSGDDDLTEAVDEAQVHGVQVVVFAVPSAEGKPHGVSRHLVRAADE 176 >gi|225020005|ref|ZP_03709197.1| hypothetical protein CORMATOL_00001 [Corynebacterium matruchotii ATCC 33806] gi|224947140|gb|EEG28349.1| hypothetical protein CORMATOL_00001 [Corynebacterium matruchotii ATCC 33806] Length = 404 Score = 78.1 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 68/181 (37%), Gaps = 27/181 (14%) Query: 6 EKIALFIDGANL---YASSKALGF----DIDYRKLLKAF------RSRAIVIRAYYYTTV 52 E+ +F+D + L + +S +G +ID +++ + V R ++Y + Sbjct: 3 ERTQIFVDTSYLLASFYNSWEIGARAQLEIDLPAVVRTLGTMVTEQFEQPVHRQFWYDGI 62 Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS-- 110 ++ D G Q+ A E+ G +R + ++D L D S Sbjct: 63 PDTGPHRYQRALRTCD-----GVQLRAGQLIEW----GERRTQKAVDTRLVADMVLTSVR 113 Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 + + +V+ SGD V +V + SM+S LR D + L + Sbjct: 114 QEVTDIVLVSGDADMIPGVQEAVNHGIRVHLYGF--GWDSMSS-ALRHACDSLVILDPRE 170 Query: 171 N 171 + Sbjct: 171 D 171 >gi|134045586|ref|YP_001097072.1| hypothetical protein MmarC5_0543 [Methanococcus maripaludis C5] gi|132663211|gb|ABO34857.1| protein of unknown function DUF88 [Methanococcus maripaludis C5] Length = 193 Score = 78.1 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 61/176 (34%), Gaps = 36/176 (20%) Query: 9 ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68 AL IDG N+ F++D K+ A ++ Y L++ Sbjct: 2 ALLIDGPNM----LRKEFNVDLDKVRDALEQFGDIVVGRVYLN--------QYASDKLIE 49 Query: 69 WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFT 126 + GF+ +DVE+AVD E + L+ LV + D F Sbjct: 50 AIANQGFEPRI--------------SAGDVDVEMAVDGTELIFNKNLDTLVYMTRDADFL 95 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM----DLAYLKNEIARDPD 178 + + + K++ +V S ++ AD+ + D K ++ + Sbjct: 96 PAIRKAKERGKQIIVVGAEPGF----STAIQNIADHVIRVEEDFELDKEKLEQKKR 147 >gi|220936103|ref|YP_002515002.1| hypothetical protein Tgr7_2943 [Thioalkalivibrio sp. HL-EbGR7] gi|219997413|gb|ACL74015.1| conserved hypothetical protein [Thioalkalivibrio sp. HL-EbGR7] Length = 212 Score = 78.1 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 38/182 (20%), Positives = 63/182 (34%), Gaps = 21/182 (11%) Query: 1 MFDPREKIALFIDGANLYASSKA--LGFDIDYRKL-LKAFRSRAIVIRAYYYTTVVGDPE 57 M + + ++IDG N Y S +D L ++ R ++R Y+T V Sbjct: 1 MSSSQLRTIVYIDGFNFYYGSLKGTDYKWLDLEALFVRVLGERNNLVRIKYFTAKVQPTA 60 Query: 58 QQFSPLHPLLDWLHYN-----------GFQVVAKVAKEFTENCGR-----KRVKSSMDVE 101 Q +L G + +V+ E R K + DV Sbjct: 61 QDPDVSIRQATYLRAIQKHSPKVEVYYGHFLRHRVSMENANPPPRLVHVWKNEEKGSDVN 120 Query: 102 LAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQ 159 LA+ + + + VI S D + ++ KV + T + S QL+R Sbjct: 121 LALHVLNDAWQDAYDCAVIVSNDSDLAESLRLVKTHHDKVIGLVTPGAPKRKTSAQLKRY 180 Query: 160 AD 161 AD Sbjct: 181 AD 182 >gi|162447870|ref|YP_001621002.1| hypothetical protein ACL_1016 [Acholeplasma laidlawii PG-8A] gi|161985977|gb|ABX81626.1| conserved hypothetical protein [Acholeplasma laidlawii PG-8A] Length = 242 Score = 78.1 bits (191), Expect = 5e-13, Method: Composition-based stats. Identities = 25/177 (14%), Positives = 54/177 (30%), Gaps = 30/177 (16%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 IAL ID N+ I ++ + A Y + + + Sbjct: 9 IALLIDADNI--------SPIYLDIIINEANKHGKITNARVYGDWSQERLKTW------- 53 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCF 125 + +++ + ++ D L +DA + S + I S D F Sbjct: 54 ---RSKAEKFSLTFVQQYANLSNKG---NATDFTLVIDAMDLLYSNKVNAFCIVSSDSDF 107 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182 T L+ L+ + + + L + F + + + P +++K Sbjct: 108 TKLIIRLKEDNMYLIGMGESK-----TPEVLVNSYERFYYIDQILEALE--PKKERK 157 >gi|212705003|ref|ZP_03313131.1| hypothetical protein DESPIG_03071 [Desulfovibrio piger ATCC 29098] gi|212671555|gb|EEB32038.1| hypothetical protein DESPIG_03071 [Desulfovibrio piger ATCC 29098] Length = 229 Score = 77.8 bits (190), Expect = 6e-13, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 55/162 (33%), Gaps = 25/162 (15%) Query: 9 ALFIDGANLYA--------SSKALG----FDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP 56 AL++D N+Y +++A G + + + +R + Sbjct: 13 ALYVDFDNIYTRFLEADPEAARAFGMAPYRWVRWIENHALRILYGDGVRRR---ILKRMC 69 Query: 57 EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE---QSEGL 113 + FQVV R K+S D+ L +D + Sbjct: 70 YLNPQRYQEFRYHFIRSAFQVVDCP-------PLTTRGKTSTDIHLVMDCMDDLSHPTHF 122 Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQ 155 + +I SGD FT L+ LQ ++ I+S S P+ + Sbjct: 123 DEFIILSGDADFTPLLIRLQEHARRTLILSVGYSSPAYTAAA 164 >gi|294495820|ref|YP_003542313.1| hypothetical protein Mmah_1163 [Methanohalophilus mahii DSM 5219] gi|292666819|gb|ADE36668.1| protein of unknown function DUF88 [Methanohalophilus mahii DSM 5219] Length = 169 Score = 77.8 bits (190), Expect = 6e-13, Method: Composition-based stats. Identities = 32/165 (19%), Positives = 56/165 (33%), Gaps = 32/165 (19%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 R I L +DG N+ FD++ ++ + V + + Sbjct: 23 RRSIGLLVDGPNV----LRKEFDVNLEEIRDVLKEYGNVKIGRVFLN--------QYASN 70 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGD 122 L++ + NGF+ V S +DV LAV+ + ++ L + + D Sbjct: 71 KLVEAVENNGFEPVIC--------------SSDVDVRLAVEGMDLVHNPNIDTLALVTRD 116 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ K+ I S LR +DY + L Sbjct: 117 ADFKPLLNKANEHGKETIIFGVEPGF----STALRNSSDYVVILN 157 >gi|330503755|ref|YP_004380624.1| hypothetical protein MDS_2841 [Pseudomonas mendocina NK-01] gi|328918041|gb|AEB58872.1| hypothetical protein MDS_2841 [Pseudomonas mendocina NK-01] Length = 239 Score = 77.8 bits (190), Expect = 6e-13, Method: Composition-based stats. Identities = 23/131 (17%), Positives = 39/131 (29%), Gaps = 22/131 (16%) Query: 37 FRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKS 96 V+ Y L + ++ + G K+ Sbjct: 2 VAQFGHVVLRRGYGN-----------HGTLANKWQEAAVRLAFTPCLQCQYAAG----KN 46 Query: 97 SMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASD 154 + D+ LA+DA E + + + D F L L+ + V IV D Sbjct: 47 TSDIALALDAMEALFDHRADTFCLVTSDSDFAYLCRKLRERGATVCIVGE-----PKTPD 101 Query: 155 QLRRQADYFMD 165 LR +D F + Sbjct: 102 ALRNASDQFFE 112 >gi|305681687|ref|ZP_07404493.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC 14266] gi|305658847|gb|EFM48348.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC 14266] Length = 406 Score = 77.8 bits (190), Expect = 6e-13, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 68/181 (37%), Gaps = 27/181 (14%) Query: 6 EKIALFIDGANL---YASSKALGF----DIDYRKLLKAF------RSRAIVIRAYYYTTV 52 E+ +F+D + L + +S +G +ID +++ + V R ++Y + Sbjct: 3 ERTQIFVDTSYLLASFYNSWEIGARAQLEIDLPAVVRTLGTMVTEQFEQPVHRQFWYDGI 62 Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS-- 110 ++ D G Q+ A E+ G +R + ++D L D S Sbjct: 63 PDTGPHRYQRALRTCD-----GVQLRAGQLIEW----GERRTQKAVDTRLVADMVLTSVR 113 Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 + + +V+ SGD V +V + SM+S LR D + L + Sbjct: 114 QEVTDIVLVSGDADMIPGVQEAVNHGIRVHLYGF--GWDSMSS-ALRHACDSLVILDPRE 170 Query: 171 N 171 + Sbjct: 171 D 171 >gi|56964892|ref|YP_176623.1| hypothetical protein ABC3128 [Bacillus clausii KSM-K16] gi|56911135|dbj|BAD65662.1| hypothetical protein [Bacillus clausii KSM-K16] Length = 280 Score = 77.8 bits (190), Expect = 6e-13, Method: Composition-based stats. Identities = 32/184 (17%), Positives = 65/184 (35%), Gaps = 24/184 (13%) Query: 1 MFDPRE--KIALFIDGANLYASS-KALGFDIDYRK----LLKAFRSRAIVIRAYYYTTVV 53 MF ++ +A+FID N+Y + + ++ + L R + + Sbjct: 12 MFKTKDHNNVAIFIDYDNVYWTLMNRYNHNPNHEEQEKNLFNCLWDRYGQNQVRTFRAYA 71 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--- 110 F + L L Q+ ++ + K+S D+EL +DA E + Sbjct: 72 -----DFQRIRSSLTDLQKQRVQIRH----VYSNDKEGDSRKNSSDIELCIDAIESTYKD 122 Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 E + V + D +++ L K K+V + + P +Y L+ Sbjct: 123 ENISCYVFVTADSDMVPIMSRLMYKGKRVELYYLSEAAPKHT-----DITNYSHYSEDLR 177 Query: 171 NEIA 174 + + Sbjct: 178 DFLQ 181 >gi|300780231|ref|ZP_07090087.1| conserved hypothetical protein [Corynebacterium genitalium ATCC 33030] gi|300534341|gb|EFK55400.1| conserved hypothetical protein [Corynebacterium genitalium ATCC 33030] Length = 402 Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 61/184 (33%), Gaps = 27/184 (14%) Query: 6 EKIALFIDGANL---YASSKALGF----DIDYRKLLKAFRS------RAIVIRAYYYTTV 52 E+ +F+D + L + +S G +ID +++ + + R ++Y + Sbjct: 3 ERTVVFVDTSYLLASFYNSWETGARSQLEIDLPEVVANLGTMITQQLHQPIHRQFWYDGI 62 Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS-- 110 ++ D G Q+ E+ G +R + +D L D + Sbjct: 63 PDSGPHRYQRALRTCD-----GVQLRTGQLIEW----GERRTQKGVDTRLVADIVANAMR 113 Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 V+ SGD V ++ + SM+S LR D L + Sbjct: 114 GQYSDFVLVSGDADMIPGVEEATNAGVRMHLYGF--GWDSMSS-ALRHACDSTTILDPRE 170 Query: 171 NEIA 174 + Sbjct: 171 DFAE 174 >gi|330987024|gb|EGH85127.1| hypothetical protein PLA107_18497 [Pseudomonas syringae pv. lachrymans str. M301315] Length = 206 Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats. Identities = 37/193 (19%), Positives = 67/193 (34%), Gaps = 23/193 (11%) Query: 5 REKIALFIDGANLYASSKALGFD----IDYRKLLKAFRSRAIVIRAYYYTTVV----GDP 56 +++ ++DG NL K F +D L A + A +Y T G Sbjct: 1 MQRVITYVDGFNLSFGLKDSRFKKYYWLDLPALSAALFKPGQQLVATHYFTARIRTNGRN 60 Query: 57 EQQFSPLHPLLDWLHYNG----FQVVAKVAKEFTENCGRKRV---KSSMDVELAVDAFEQ 109 +D L + + CG + DV +A Sbjct: 61 AADAKRQTSYIDALTAQDNLTVHEGHYLEKTQRCNGCGATWKAYEEKMTDVNIAAQMLAD 120 Query: 110 S--EGLEHLVIFSGDGCFTTLVAALQRK--VKKVTIVSTVLSDPSMASDQLRRQADYFMD 165 + + + I SGD TT + ++ + K++ +V P+ S QL++ A+ F+ Sbjct: 121 AYEDRFDTAFIISGDSDLTTPIQQVRNRFPNKRLIVV----FPPNRQSAQLKKAANGFLS 176 Query: 166 LAYLKNEIARDPD 178 + K + PD Sbjct: 177 IGEDKLRQNQLPD 189 >gi|325672821|ref|ZP_08152515.1| hypothetical protein HMPREF0724_10296 [Rhodococcus equi ATCC 33707] gi|325556074|gb|EGD25742.1| hypothetical protein HMPREF0724_10296 [Rhodococcus equi ATCC 33707] Length = 328 Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats. Identities = 33/171 (19%), Positives = 53/171 (30%), Gaps = 30/171 (17%) Query: 10 LFIDGANLYASS--------KALGFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGD 55 L+ID L AS+ G +DY KL+ + A V+R ++Y + Sbjct: 7 LYIDAGYLLASAATRVTGTSLRGGIHVDYAKLVSSLVDAAQARSGLPVLRVHWYDSARNG 66 Query: 56 PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--L 113 G K G + +D+ + +D + Sbjct: 67 VPDPQQ---------ERIG---ELSKVKLRLGRFGVNGEQKGVDLRIGLDLVAHARNGAS 114 Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVST--VLSDPSMASDQLRRQADY 162 + + SGD T V Q +V + + P S L R AD Sbjct: 115 DVFFLVSGDDDLTEAVDEAQVHGVQVVVFAVPSAEGKPHGVSRHLVRAADE 165 >gi|315445391|ref|YP_004078270.1| hypothetical protein Mspyr1_38410 [Mycobacterium sp. Spyr1] gi|315263694|gb|ADU00436.1| uncharacterized conserved protein [Mycobacterium sp. Spyr1] Length = 302 Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats. Identities = 38/204 (18%), Positives = 64/204 (31%), Gaps = 45/204 (22%) Query: 7 KIALFIDGANLYASS-------------KALGFD----------IDYRKLLKAFRSRAIV 43 ++A+++D N+ S KA GFD +D ++ S + Sbjct: 8 RVAVYLDFDNIVLSRYDQVNGRNSFQRDKAKGFDEVRDKLDRATVDVGAIIDFASSFGTL 67 Query: 44 IRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELA 103 + Y + ++ F K+ D+ LA Sbjct: 68 VLTRAYADWSAEINARYRGQLVGRAVDLVQLF-------------PAAAYGKNGADIRLA 114 Query: 104 VDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160 VDA E L H+VI +GD + L +R + V + +S L Sbjct: 115 VDAVEDMFRLPDLTHVVIVAGDSDYIALAQRCKRLGRYVVGI----GVAGSSSRMLAAAC 170 Query: 161 DYFMDLAYL--KNEIARDPDEDKK 182 D F+ L +P D+K Sbjct: 171 DEFVTYDTLPGVPVFEPEPVADEK 194 >gi|220919728|ref|YP_002495031.1| hypothetical protein Mnod_8422 [Methylobacterium nodulans ORS 2060] gi|219952148|gb|ACL62539.1| conserved hypothetical protein [Methylobacterium nodulans ORS 2060] Length = 204 Score = 77.8 bits (190), Expect = 7e-13, Method: Composition-based stats. Identities = 24/166 (14%), Positives = 53/166 (31%), Gaps = 13/166 (7%) Query: 5 REKIALFIDGANLYASSKALGF----DIDYRKLLKAFRSRAI-VIRAYYYTTVVGDPEQQ 59 ++ ++DG NLY + L +D +L ++ +I ++T Sbjct: 1 MRRVIAYVDGFNLYHAIDDLQKPHLKWLDLWQLAQSICGTGETLIEVNFFTAYPTWKPGP 60 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAK------EFTENCGRKRVKSSMDVELAVDAFEQS--E 111 + L + G V K + G + DV +AV + + Sbjct: 61 MKRHQVYVKALRHAGVNCVIGHFKTKQRECKRCGAQGDVHEEKETDVAIAVQITTDAFLD 120 Query: 112 GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLR 157 G + +I S D + +++ + + + L+ Sbjct: 121 GYDRALIISADSDLAPALRTVRQHFPRKALNVIAPPGRKGHARDLQ 166 >gi|147920799|ref|YP_685395.1| hypothetical protein RCIX674 [uncultured methanogenic archaeon RC-I] gi|110620791|emb|CAJ36069.1| conserved hypothetical protein [uncultured methanogenic archaeon RC-I] Length = 190 Score = 77.4 bits (189), Expect = 7e-13, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 55/162 (33%), Gaps = 32/162 (19%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 R+ IAL +DG N+ F ID + + + + Sbjct: 32 RKGIALLVDGPNM----LRKEFQIDLEVVRDILKRYGDIKVGKVFLN--------QYASD 79 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGD 122 L++ + GF+ + +DV LAVDA E + ++ + I + D Sbjct: 80 KLVEAIENQGFEPIV--------------GSGDVDVRLAVDAMELVFNQHIDTIAIVTRD 125 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 F +++ K+ + S L+ ADY + Sbjct: 126 ADFKPVLSKASMYGKETIVFGAEPGL----SIALKNVADYVI 163 >gi|271962863|ref|YP_003337059.1| hypothetical protein Sros_1318 [Streptosporangium roseum DSM 43021] gi|270506038|gb|ACZ84316.1| hypothetical protein Sros_1318 [Streptosporangium roseum DSM 43021] Length = 313 Score = 77.4 bits (189), Expect = 8e-13, Method: Composition-based stats. Identities = 26/187 (13%), Positives = 64/187 (34%), Gaps = 30/187 (16%) Query: 7 KIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSR------AIVIRAYYYTTV 52 K A+ +D LYA++ + + +L++A + ++R Y+Y Sbjct: 14 KYAVLVDVGYLYAAAGEVLLGAKERKEYRVSADELIQALQKHAETRIHGELLRIYWYDAA 73 Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG 112 + L W K N + + +D ++ D + Sbjct: 74 RDRVPTVDQRVIAQLPW------------VKVRLGNLNARGQQKGVDAQIRSDLEALARH 121 Query: 113 --LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAY 168 + ++ +GD V A Q ++ + + +++L ++D + + Sbjct: 122 HAVSDTILLAGDEDMVPAVEAAQAYGVRIHLWGVEPPYGTNQAERLVWESDTVEIISADF 181 Query: 169 LKNEIAR 175 L++ +R Sbjct: 182 LRSYFSR 188 >gi|291276906|ref|YP_003516678.1| hypothetical protein HMU06860 [Helicobacter mustelae 12198] gi|290964100|emb|CBG39944.1| Putative hypothetical protein [Helicobacter mustelae 12198] Length = 233 Score = 77.4 bits (189), Expect = 9e-13, Method: Composition-based stats. Identities = 28/148 (18%), Positives = 53/148 (35%), Gaps = 17/148 (11%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 D KIALF+D N+ A + R++ + S V Y D ++ Sbjct: 1 MDKERKIALFLDCENV-----AAKWA---REIFERLESIGDVCIKKAYGDWRNDALNPWN 52 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIF 119 L+ + + K + K+S D+++++D ++ +VI Sbjct: 53 A--ELIQYAIEPIHIITGNHYK-----NNQGSGKNSCDIKISIDIMNCLYDKIVDCIVIV 105 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLS 147 S D F L ++ K +V + Sbjct: 106 SSDSDFAPLAQEIRSKGLQVIGFGENKA 133 >gi|327480971|gb|AEA84281.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166] Length = 220 Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 35/98 (35%), Gaps = 11/98 (11%) Query: 70 LHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTT 127 ++ ++ G K++ D+ LA+DA E + + + D F Sbjct: 5 WQEALVRLAFTPCLQYQYAAG----KNTSDIALALDAMEALFDHRADTFCLVTSDSDFAY 60 Query: 128 LVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165 L L+ + V IV D LR +D F + Sbjct: 61 LCRKLRERGATVCIVGE-----PKTPDALRNASDQFFE 93 >gi|256829512|ref|YP_003158240.1| hypothetical protein Dbac_1733 [Desulfomicrobium baculatum DSM 4028] gi|256578688|gb|ACU89824.1| protein of unknown function DUF88 [Desulfomicrobium baculatum DSM 4028] Length = 209 Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 33/192 (17%), Positives = 65/192 (33%), Gaps = 34/192 (17%) Query: 11 FIDGANLY---ASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 ID L+ S ++ G++ Y +L ++ RAYY + P H L Sbjct: 9 LIDAGYLFNARHSVRS-GYEFSYLRLRNYLEQDGLIWRAYYLNSTPNPPSDGQDNFHRWL 67 Query: 68 DWLHYNGFQVVAKVA---KEFTE-----------------------NCGRKRVKSSMDVE 101 G +++ K ++ + + ++ +DV Sbjct: 68 RSGPPFGPKIITKFYTLKQQRADKAYCEECGQKVSLRCQNQHGDFTHRVFNEIQKGVDVA 127 Query: 102 LAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 +A + E L++ SGD V L + K + +V S +L+ +AD Sbjct: 128 IATLSLIHQRNYETLMLSSGDSDLLDAVEHLSEQGKSIELVVFRDGV----SSELQCRAD 183 Query: 162 YFMDLAYLKNEI 173 + +E+ Sbjct: 184 RIYWINDFASEV 195 >gi|288926820|ref|ZP_06420728.1| conserved hypothetical protein [Prevotella buccae D17] gi|288336392|gb|EFC74770.1| conserved hypothetical protein [Prevotella buccae D17] Length = 226 Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 25/157 (15%), Positives = 48/157 (30%), Gaps = 29/157 (18%) Query: 9 ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68 A+ IDG N+ ++ LG ++ S I Y +++ Sbjct: 2 AILIDGDNV--AADKLG------DIISFVSSYGNPIIRRIYADWTKSAMKRWK------- 46 Query: 69 WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCFT 126 F A + VK++ D+ L ++A + ++ I S D +T Sbjct: 47 -EEAKTFSFRLVEALSYVG------VKNTTDMALVIEAMDLLHGKTVQGFCIVSSDSDYT 99 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163 L ++ + V L+ F Sbjct: 100 LLAQRIREEGLLVLGYGEQK-----TPASLQNSCHEF 131 >gi|167629267|ref|YP_001679766.1| hypothetical protein HM1_0800 [Heliobacterium modesticaldum Ice1] gi|167592007|gb|ABZ83755.1| hypothetical protein HM1_0800 [Heliobacterium modesticaldum Ice1] Length = 214 Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 41/176 (23%), Positives = 67/176 (38%), Gaps = 16/176 (9%) Query: 6 EKIALFIDGANLYASSKAL--GFDIDYRKLLKAFRSRAIVIRAYYYTTVV-------GDP 56 +K A+FIDG L + +DY KL K + R YYY + + Sbjct: 21 DKCAIFIDGGYLDKVFQDEFGSPRVDYLKLSKWLSRGTSIFRTYYYNCLPYQSNPPTTEE 80 Query: 57 EQQFSPLHPLLDWLHYNG-FQVVAKVAKEFTENCGRK--RVKSSMDVELAVDAFEQS--E 111 Q+FS L ++V + V+ +D+ L VD + Sbjct: 81 SQRFSKKQAFYGRLKQLERYEVRLGKLEFRGNRQDGTPIFVQKRVDILLGVDLALLAAKN 140 Query: 112 GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 + H IF+GD F ++ + + +T+ S+P D L R+AD + L Sbjct: 141 RITHATIFAGDSDFLPAISVAKNEGVLITLAHGGASNPPH--DDLWREADERIQLD 194 >gi|222824458|ref|YP_002576032.1| hypothetical protein Cla_1475 [Campylobacter lari RM2100] gi|222539679|gb|ACM64780.1| conserved hypothetical protein [Campylobacter lari RM2100] Length = 229 Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 28/165 (16%), Positives = 50/165 (30%), Gaps = 29/165 (17%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 + +A+FID N+ SK D ++ Y Q + Sbjct: 3 NKSVAIFIDAENIP--SKYAKSIFDI------ASDYGEIVIKRIYGDWTQKNIQNWKEQI 54 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGD 122 + F +A K+S D+ L + + ++ VI S D Sbjct: 55 AQYSIIAMQQFNFIA--------------NKNSSDMYLITEIMSFFYEKDIDIFVIVSSD 100 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 +T+L+ L+ K+V + + S F L Sbjct: 101 SDYTSLIQRLKEGKKQVIGMGLKQAVKSY-----VNSFSEFFYLD 140 >gi|283955380|ref|ZP_06372879.1| hypothetical protein C414_000450061 [Campylobacter jejuni subsp. jejuni 414] gi|283793140|gb|EFC31910.1| hypothetical protein C414_000450061 [Campylobacter jejuni subsp. jejuni 414] Length = 232 Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 50/166 (30%), Gaps = 29/166 (17%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 + IA+FID N+ +K D VI Y Q + Sbjct: 3 NKSIAIFIDAENIP--AKYAKSIFDI------ASDYGEVIIKRIYGDWTQKNIQGWKEQI 54 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGD 122 + ++F K+S D+ L + + ++ VI S D Sbjct: 55 A----------EYSLIAMQQF----NFAANKNSSDMYLITEIMSIFYEKNIDIFVIVSSD 100 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 +T+L+ L+ K+V + S S F L Sbjct: 101 SDYTSLIQKLRENKKQVIGMGLEKSIKSY-----VNAFSEFFYLDK 141 >gi|296268176|ref|YP_003650808.1| hypothetical protein Tbis_0183 [Thermobispora bispora DSM 43833] gi|296090963|gb|ADG86915.1| protein of unknown function DUF88 [Thermobispora bispora DSM 43833] Length = 468 Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 28/188 (14%), Positives = 61/188 (32%), Gaps = 31/188 (16%) Query: 5 REKIALFIDGANLYA--------SSKALGFDIDYRKLLKAFRSRAI------VIRAYYYT 50 ++ ALF+D L A + + D L++ + ++R Y+Y Sbjct: 1 MDRCALFVDAGYLLADGARAVHGTRQREAVSWDLPGLVRFLGKLSRDRTGLPLLRCYWYE 60 Query: 51 TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110 V + + + R + MD ++ D + Sbjct: 61 ATVEGRRTPEHD-------------VLADIPGIKLRLSRIRPGRREGMDAQVHRDLMTLA 107 Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL-- 166 + V+ SGD ++ Q +VT+V ++ LR++ D +++ Sbjct: 108 RNNAICDAVVVSGDEDLVQVICDAQDLGIRVTVVQIAGESGWSSARALRQECDDLIEVGG 167 Query: 167 AYLKNEIA 174 L+ + Sbjct: 168 GQLRPYVT 175 >gi|38234817|ref|NP_940584.1| hypothetical protein DIP2281 [Corynebacterium diphtheriae NCTC 13129] gi|38201081|emb|CAE50805.1| Conserved hypothetical protein [Corynebacterium diphtheriae] Length = 458 Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 64/181 (35%), Gaps = 27/181 (14%) Query: 6 EKIALFIDGANL---YASSKALGF----DIDYRKLLKAFRS------RAIVIRAYYYTTV 52 E+ +F+D + L + +S +G +ID +++ + V R ++Y + Sbjct: 3 ERTQVFVDTSYLLASFYNSWEIGARAQLEIDLPEVVATLGNMIHNQLGQPVHRQFWYDGI 62 Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS-- 110 ++ D G Q+ A E+ G +R + ++D L D Sbjct: 63 PESGPHRYQRALRTCD-----GVQLRAGQLIEW----GERRTQKAVDTRLVADMVLAGVR 113 Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 +V+ SGD V +V + SM+S LR D L + Sbjct: 114 REFTDIVLVSGDADMIPGVQEAVNAGVRVHLYGF--GWDSMSS-ALRHACDSTTILDPRE 170 Query: 171 N 171 + Sbjct: 171 D 171 >gi|332158255|ref|YP_004423534.1| hypothetical protein PNA2_0614 [Pyrococcus sp. NA2] gi|331033718|gb|AEC51530.1| hypothetical protein PNA2_0614 [Pyrococcus sp. NA2] Length = 165 Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 33/171 (19%), Positives = 60/171 (35%), Gaps = 32/171 (18%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 P++ I L IDG N+ F I + KA + A Sbjct: 22 PQKTIGLIIDGPNI----LRKEFGIKLEDIKKALERIGKIRVAKVVLNQYAP-------- 69 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSG 121 L++ + GF+ + V DV +A++A E ++ + + + Sbjct: 70 QGLIEAVVNQGFEPII--------------VAGDTDVRVAIEAMELIYNANVDVIALATR 115 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 D F L++ +RK K+ ++ S L+ ADY + + E Sbjct: 116 DADFLPLISEAKRKGKETVVIGVEPGF----SVALQNAADYIIKMEKKAEE 162 >gi|189462157|ref|ZP_03010942.1| hypothetical protein BACCOP_02839 [Bacteroides coprocola DSM 17136] gi|189431130|gb|EDV00115.1| hypothetical protein BACCOP_02839 [Bacteroides coprocola DSM 17136] Length = 213 Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 25/166 (15%), Positives = 52/166 (31%), Gaps = 14/166 (8%) Query: 2 FDPREKIALFIDGANLYASSKALG-----FDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP 56 + ++++ ++IDG N Y K+ + +D KL + F + A Y + D Sbjct: 1 MEQKQRVIVYIDGFNFYFGLKSNAKWKKYYWLDIVKLFEMFMRPNQELVAVKYFSAKPDD 60 Query: 57 EQQFSPLHPLLDWLHYNGF------QVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQ 109 Q + N + + K F + DV +A Sbjct: 61 IDQSLRQNAFFQANRENPKFKLILGKYLKKSITCFKCGNVIHTHEEKETDVRIATQIIAD 120 Query: 110 S--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMAS 153 + + + ++ S D + +KV + S + Sbjct: 121 AYQKNCDISIVVSADSDMIPAIELATEACQKVFVYFPPYQYSSNLA 166 >gi|332527193|ref|ZP_08403265.1| hypothetical protein RBXJA2T_14776 [Rubrivivax benzoatilyticus JA2] gi|332111617|gb|EGJ11598.1| hypothetical protein RBXJA2T_14776 [Rubrivivax benzoatilyticus JA2] Length = 155 Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats. Identities = 30/176 (17%), Positives = 53/176 (30%), Gaps = 31/176 (17%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 + L ID N+ ++ + Y T Sbjct: 5 VMLLIDADNVSLDVMEQAVEL-------MIERHGALHVRRAYCTA--------ESALKHQ 49 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCF 125 G + + +A K+S D+ +AVDA + + + I S D F Sbjct: 50 AAFKRLGIKPMVNLA----------AGKNSTDIAMAVDAIDLVLALRPAVVAIASSDSDF 99 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 LV L+ K +V + D+ D F L++ + +A P + Sbjct: 100 APLVQRLREKGCRVVGL----GQDGKTGDETISVYDEFTVLSHRRGGVATTPSRGR 151 >gi|255324081|ref|ZP_05365206.1| conserved hypothetical protein [Corynebacterium tuberculostearicum SK141] gi|311740303|ref|ZP_07714134.1| conserved hypothetical protein [Corynebacterium pseudogenitalium ATCC 33035] gi|255298938|gb|EET78230.1| conserved hypothetical protein [Corynebacterium tuberculostearicum SK141] gi|311304686|gb|EFQ80758.1| conserved hypothetical protein [Corynebacterium pseudogenitalium ATCC 33035] Length = 365 Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 61/181 (33%), Gaps = 27/181 (14%) Query: 6 EKIALFIDGANL---YASSKALGF----DIDYRKLLKAFRS------RAIVIRAYYYTTV 52 E+ +F+D + L + +S G +ID +++ + R Y+Y + Sbjct: 3 ERTLVFVDTSYLLASFYNSWETGARAQLEIDLPEVVSTMGGMIENQLGTPIQRQYWYDGI 62 Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS-- 110 ++ + G Q+ E+ G +R + ++D L D + Sbjct: 63 PDTGPHRYQRALRTCE-----GVQLRTGQLIEW----GERRTQKAVDTRLVADMVIAAMK 113 Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 V+ SGD A +V + SM+S LR D L + Sbjct: 114 GQFTDFVLVSGDADMIPGAQAAVDNGIRVHLYGF--GWDSMSS-ALRHACDSTTILDPRE 170 Query: 171 N 171 + Sbjct: 171 D 171 >gi|298674395|ref|YP_003726145.1| hypothetical protein Metev_0431 [Methanohalobium evestigatum Z-7303] gi|298287383|gb|ADI73349.1| protein of unknown function DUF88 [Methanohalobium evestigatum Z-7303] Length = 178 Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 55/165 (33%), Gaps = 32/165 (19%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 R I L +DG N+ F+++ + + V + Sbjct: 23 RRNIGLLVDGPNV----LRKEFNVNLEAIRDVLKEYGNVKIGLVFLN--------QYASE 70 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGD 122 L++ + NGF+ V S +DV LAV+ E ++ + + + D Sbjct: 71 KLVEAIENNGFEPVIC--------------SSDVDVRLAVEGTEMVCNPNIDTITLVTRD 116 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F L+ + K+ + S L+ ADY + L Sbjct: 117 ADFKPLLNKANKHGKETILFGVEPGF----SPALKNSADYVIMLN 157 >gi|298708071|emb|CBJ30424.1| conserved unknown protein [Ectocarpus siliculosus] Length = 825 Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 29/174 (16%), Positives = 60/174 (34%), Gaps = 42/174 (24%) Query: 7 KIALFIDGANLYASS------------KALGFDIDY------------RKLLKAFRSRA- 41 K+ +FIDG LY S G+ +Y R + Sbjct: 188 KVMVFIDGTWLYYSFFGRGERCHVSAKLGPGWVYEYNVKWEMLPVIISRAVHAQLARYGQ 247 Query: 42 -----IVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKS 96 V+R +++ D ++ + + + + F+V + Sbjct: 248 SSRLVEVVRTVVFSSARKDTDKDSTRMRMF-NAMREKNFEVHMATTV--------GVQEK 298 Query: 97 SMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLS 147 +D+ LAV+ + + + V+ +GD F +A ++K ++V + S S Sbjct: 299 CIDIALAVEMMHYATIPDTYDVGVLVTGDKDFMPAMARTRQKGRRVCLCSMRNS 352 >gi|148926354|ref|ZP_01810038.1| hypothetical protein Cj8486_0183c [Campylobacter jejuni subsp. jejuni CG8486] gi|145844746|gb|EDK21851.1| hypothetical protein Cj8486_0183c [Campylobacter jejuni subsp. jejuni CG8486] Length = 232 Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 50/166 (30%), Gaps = 29/166 (17%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 + IA+FID N+ +K D VI Y Q + Sbjct: 3 NKSIAIFIDAENIP--AKYAKSIFDI------ASDYGEVIIKRIYGDWTQKNIQGW---- 50 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGD 122 + ++F K+S D+ L + + ++ VI S D Sbjct: 51 ------REQIAEYSLIAMQQF----NFAANKNSSDMYLITEIMSIFYEKNIDIFVIVSSD 100 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 +T+L+ L+ K+V + S S F L Sbjct: 101 SDYTSLIQKLRENKKQVIGMGLEKSIKSY-----VNAFSEFFYLDK 141 >gi|315930197|gb|EFV09312.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 305] Length = 223 Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 50/166 (30%), Gaps = 29/166 (17%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 + IA+FID N+ +K D VI Y Q + Sbjct: 3 NKSIAIFIDAENIP--AKYAKSIFDI------ASDYGEVIIKRIYGDWTQKNIQGW---- 50 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGD 122 + ++F K+S D+ L + + ++ VI S D Sbjct: 51 ------REQIAEYSLIAMQQF----NFAANKNSSDMYLITEIMSIFYEKNIDIFVIVSSD 100 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 +T+L+ L+ K+V + S S F L Sbjct: 101 SDYTSLIQKLRENKKQVIGMGLEKSIKSY-----VNAFSEFFYLDK 141 >gi|227541425|ref|ZP_03971474.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51866] gi|227182813|gb|EEI63785.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51866] Length = 448 Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 60/181 (33%), Gaps = 27/181 (14%) Query: 6 EKIALFIDGANL---YASSKALGF----DIDYRKLLKAFRS------RAIVIRAYYYTTV 52 E+ +F+D + L + +S G +ID +++ + + R +Y + Sbjct: 3 ERTMVFVDTSYLLASFYNSWETGARAQLEIDLPEVVAQLKGMIEDQLGQPIHRQMWYDGI 62 Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG 112 ++ NG Q+ E+ G +R + ++D L D Sbjct: 63 PDSGPHRYHRALRAC-----NGVQLRVGQLIEW----GERRTQKAVDTRLVADLVLAGVH 113 Query: 113 --LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 V+ SGD V +V + SM+S LR D L + Sbjct: 114 QTCSDAVLVSGDADMIPGVNEATNSGVRVHLYGF--GWDSMSS-ALRHACDTTTILDPRE 170 Query: 171 N 171 + Sbjct: 171 D 171 >gi|227487719|ref|ZP_03918035.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227092340|gb|EEI27652.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51867] Length = 448 Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 60/181 (33%), Gaps = 27/181 (14%) Query: 6 EKIALFIDGANL---YASSKALGF----DIDYRKLLKAFRS------RAIVIRAYYYTTV 52 E+ +F+D + L + +S G +ID +++ + + R +Y + Sbjct: 3 ERTMVFVDTSYLLASFYNSWETGARAQLEIDLPEVVAQLKGMIEDQLGQPIHRQMWYDGI 62 Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG 112 ++ NG Q+ E+ G +R + ++D L D Sbjct: 63 PDSGPHRYHRALRAC-----NGVQLRVGQLIEW----GERRTQKAVDTRLVADLVLAGVH 113 Query: 113 --LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 V+ SGD V +V + SM+S LR D L + Sbjct: 114 QTCSDAVLVSGDADMIPGVNEATNSGVRVHLYGF--GWDSMSS-ALRHACDTTTILDPRE 170 Query: 171 N 171 + Sbjct: 171 D 171 >gi|153951620|ref|YP_001397437.1| hypothetical protein JJD26997_0199 [Campylobacter jejuni subsp. doylei 269.97] gi|152939066|gb|ABS43807.1| conserved hypothetical protein [Campylobacter jejuni subsp. doylei 269.97] Length = 232 Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 50/166 (30%), Gaps = 29/166 (17%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 + IA+FID N+ +K D VI Y Q + Sbjct: 2 KNKSIAIFIDAENIP--AKYAKSIFDI------ASDYGEVIIKRIYGDWTQKNIQGW--- 50 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSG 121 + ++F K+S D+ L + + ++ VI S Sbjct: 51 -------REQIAEYSLIAMQQF----NFAANKNSSDMYLITEIMSIFYEKNIDIFVIVSS 99 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 D +T+L+ L+ K+V + S S F L Sbjct: 100 DSDYTSLIQKLRENKKQVIGMGLEKSIKSY-----VNAFSEFFYLD 140 >gi|227548518|ref|ZP_03978567.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM 44291] gi|227079347|gb|EEI17310.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM 44291] Length = 404 Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 59/181 (32%), Gaps = 27/181 (14%) Query: 6 EKIALFIDGANL---YASSKALGF----DIDYRKLLKAFRS------RAIVIRAYYYTTV 52 E+ +F+D + L + +S +G +ID +++ + + R Y+Y + Sbjct: 3 ERTLVFVDTSYLLASFYNSWEIGARAQLEIDLPEVVSTLGAMITHQLHQPIHRQYWYDGI 62 Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG 112 ++ D G Q+ E+ G +R + +D L D + Sbjct: 63 PDSGPHRYQRALRTCD-----GVQLRTGQLIEW----GERRTQKGVDTRLVADLVVNASR 113 Query: 113 --LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 V+ SGD V +V + S LR D L + Sbjct: 114 QQFTDFVLLSGDADMIPGVEEATGFGVRVHLYGFG---WDSMSTALRHSCDSTTILDPRE 170 Query: 171 N 171 + Sbjct: 171 D 171 >gi|84495933|ref|ZP_00994787.1| hypothetical protein JNB_00400 [Janibacter sp. HTCC2649] gi|84382701|gb|EAP98582.1| hypothetical protein JNB_00400 [Janibacter sp. HTCC2649] Length = 309 Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 30/200 (15%), Positives = 56/200 (28%), Gaps = 50/200 (25%) Query: 1 MFDPREKIALFIDGANLYAS----------------------------SKALGFDIDYRK 32 M D ++A+++D N+ S ++ ++D Sbjct: 1 MPDSS-RVAVYLDFDNMVISRYDNLHGNNSWRNDNARDHRPGGGDATDTRLAQAEVDLGA 59 Query: 33 LLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRK 92 ++ S V Y + F Sbjct: 60 IIDYASSFGTVALTRAYADWSVPANAAYKHQLIDRAVDLVQLF--------------ATS 105 Query: 93 RVKSSMDVELAVDAF-EQSEGLE--HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDP 149 K+ D+ L++DA + + + H+VI +GD + L +R + V + Sbjct: 106 GTKNGADIRLSIDAVNDLVDHKDLTHVVIVAGDSDYIALAQRCRRMGRFVVGI----GVT 161 Query: 150 SMASDQLRRQADYFMDLAYL 169 S L D F D L Sbjct: 162 GSTSRALVAACDEFSDYGDL 181 >gi|86153669|ref|ZP_01071872.1| Protein of unknown function family [Campylobacter jejuni subsp. jejuni HB93-13] gi|85842630|gb|EAQ59842.1| Protein of unknown function family [Campylobacter jejuni subsp. jejuni HB93-13] Length = 232 Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 50/166 (30%), Gaps = 29/166 (17%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 + IA+FID N+ +K D VI Y Q + Sbjct: 3 NKSIAIFIDAENIP--AKYAKSIFDI------ASDYGEVIIKRIYGDWTQKNIQGW---- 50 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGD 122 + ++F K+S D+ L + + ++ VI S D Sbjct: 51 ------REQIAEYSLIAMQQF----NFAANKNSSDMYLITEIMSIFYEKNIDIFVIVSSD 100 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 +T+L+ L+ K+V + S S F L Sbjct: 101 SDYTSLIQKLRENKKQVIGMGLEKSIKSY-----VNAFSEFFYLDK 141 >gi|118463148|ref|YP_883698.1| hypothetical protein MAV_4568 [Mycobacterium avium 104] gi|118164435|gb|ABK65332.1| conserved hypothetical protein [Mycobacterium avium 104] Length = 284 Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 33/198 (16%), Positives = 55/198 (27%), Gaps = 45/198 (22%) Query: 9 ALFIDGANLYASS-----------------------KALGFDIDYRKLLKAFRSRAIVIR 45 A+++D N+ S + +D +L S ++ Sbjct: 2 AVYLDFDNIVISRYDQIHGRNSFQRDKAKGLEQFTERLEQATVDVGAILDFASSFGTLVL 61 Query: 46 AYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVD 105 Y + + F K+ D+ LAVD Sbjct: 62 TRAYADWSAEINAGYRGQLVARAVDLVQLF-------------PAAAYGKNGADIRLAVD 108 Query: 106 AFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162 A E L H+VI +GD + L +R + V + +S L D Sbjct: 109 AVEDMFRLPDLTHVVIVAGDSDYIPLAQRCKRLGRYVVGI----GVAGASSRALAAACDE 164 Query: 163 FMDLAYLKNE--IARDPD 178 F+ L + R P Sbjct: 165 FVIYDALPGVTALDRTPA 182 >gi|21226782|ref|NP_632704.1| hypothetical protein MM_0680 [Methanosarcina mazei Go1] gi|20905077|gb|AAM30376.1| conserved protein [Methanosarcina mazei Go1] Length = 197 Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 31/186 (16%), Positives = 61/186 (32%), Gaps = 39/186 (20%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 R KI L +DG N+ FD++ ++ + + + Sbjct: 23 RRKIGLLVDGPNI----LRKEFDVNLEEIRDVLKDYGNIKIGRVFLN--------QYASD 70 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGD 122 L++ + +G + + S +DV LAV+ E ++ L I + D Sbjct: 71 KLVEAIENHGLEPIIC--------------SSDVDVRLAVEGMELVYNPNIDTLAIVTRD 116 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA-------YLKNEIAR 175 F L+ K+ I S L+ ADY + + ++E + Sbjct: 117 ADFKPLLNKANEHGKETIIFGVEPGF----STALKNSADYVILMGKNHMSGYDDEDEEGK 172 Query: 176 DPDEDK 181 ++ Sbjct: 173 PDASER 178 >gi|20092653|ref|NP_618728.1| hypothetical protein MA3857 [Methanosarcina acetivorans C2A] gi|19917935|gb|AAM07208.1| conserved hypothetical protein [Methanosarcina acetivorans C2A] Length = 195 Score = 75.8 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 55/166 (33%), Gaps = 32/166 (19%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 R KI L +DG N+ FD++ ++ + + + Sbjct: 25 RRKIGLLVDGPNI----LRKEFDVNLEEIRDVLKDYGNIKIGRVFLN--------QYASD 72 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGD 122 L++ + +G + + S +DV LAV+ E ++ L I + D Sbjct: 73 KLVEAIENHGLEPIIC--------------SSDVDVRLAVEGMELVYNPNIDTLAIVTRD 118 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F L+ K+ I S L+ ADY + + Sbjct: 119 ADFKPLLNKANEHGKETIIFGVEPGF----STALKNSADYVILMDK 160 >gi|11498667|ref|NP_069895.1| hypothetical protein AF1062 [Archaeoglobus fulgidus DSM 4304] gi|2649525|gb|AAB90177.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304] Length = 177 Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 29/182 (15%), Positives = 64/182 (35%), Gaps = 32/182 (17%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 R K+ + +DG N+ F+I+ +++ + + A + Sbjct: 22 LSQRRKVGVLVDGPNM----LRKEFNINLKEIREILSEYGDIKIAKVFLN--------QY 69 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIF 119 L++ + GF+ + +DV +AV+A E ++ + + Sbjct: 70 ATEKLVEAIENQGFEPIV--------------TSGDVDVRMAVEAMELIYNDSIDAVALV 115 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 + D F ++ K+ I+ S L+ AD + L + + D DE Sbjct: 116 TRDADFKAVLMKAMEMGKETIIIGAEPGF----STALKNSADIAIVLNEDEEKEKGDADE 171 Query: 180 DK 181 ++ Sbjct: 172 EE 173 >gi|86149532|ref|ZP_01067762.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni CF93-6] gi|86151302|ref|ZP_01069517.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 260.94] gi|88597420|ref|ZP_01100655.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 84-25] gi|121612716|ref|YP_999908.1| hypothetical protein CJJ81176_0220 [Campylobacter jejuni subsp. jejuni 81-176] gi|157414498|ref|YP_001481754.1| hypothetical protein C8J_0178 [Campylobacter jejuni subsp. jejuni 81116] gi|167004869|ref|ZP_02270627.1| hypothetical protein Cjejjejuni_01040 [Campylobacter jejuni subsp. jejuni 81-176] gi|218561868|ref|YP_002343647.1| hypothetical protein Cj0189c [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|315123788|ref|YP_004065792.1| hypothetical protein ICDCCJ07001_182 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85839800|gb|EAQ57059.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni CF93-6] gi|85841649|gb|EAQ58896.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 260.94] gi|87250099|gb|EAQ73057.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 81-176] gi|88190481|gb|EAQ94455.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 84-25] gi|112359574|emb|CAL34358.1| conserved hypothetical protein Cj0189c [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|157385462|gb|ABV51777.1| hypothetical protein C8J_0178 [Campylobacter jejuni subsp. jejuni 81116] gi|284925481|gb|ADC27833.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni IA3902] gi|307747140|gb|ADN90410.1| Putative uncharacterized protein [Campylobacter jejuni subsp. jejuni M1] gi|315017510|gb|ADT65603.1| hypothetical protein ICDCCJ07001_182 [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315928120|gb|EFV07438.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315931995|gb|EFV10948.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 327] Length = 232 Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 50/166 (30%), Gaps = 29/166 (17%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 + IA+FID N+ +K D VI Y Q + Sbjct: 3 NKSIAIFIDAENIP--AKYAKSIFDI------ASDYGEVIIKRIYGDWTQKNIQGW---- 50 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGD 122 + ++F K+S D+ L + + ++ VI S D Sbjct: 51 ------REQIAEYSLIAMQQF----NFAANKNSSDMYLITEIMSIFYEKNIDIFVIVSSD 100 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 +T+L+ L+ K+V + S S F L Sbjct: 101 SDYTSLIQKLRENKKQVIGMGLEKSIKSY-----VNAFSEFFYLDK 141 >gi|57237194|ref|YP_178206.1| hypothetical protein CJE0182 [Campylobacter jejuni RM1221] gi|57165998|gb|AAW34777.1| conserved hypothetical protein [Campylobacter jejuni RM1221] gi|315057626|gb|ADT71955.1| hypothetical protein CJS3_0185 [Campylobacter jejuni subsp. jejuni S3] Length = 232 Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 50/166 (30%), Gaps = 29/166 (17%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 + IA+FID N+ +K D VI Y Q + Sbjct: 3 NKSIAIFIDAENIP--AKYTKSIFDI------ASDYGEVIIKRIYGDWTQKNIQGW---- 50 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGD 122 + ++F K+S D+ L + + ++ VI S D Sbjct: 51 ------REQIAEYSLIAMQQF----NFAANKNSSDMYLITEIMSIFYEKNIDIFVIVSSD 100 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 +T+L+ L+ K+V + S S F L Sbjct: 101 SDYTSLIQKLRENKKQVIGMGLEKSIKSY-----VNAFSEFFYLDK 141 >gi|284161858|ref|YP_003400481.1| hypothetical protein Arcpr_0744 [Archaeoglobus profundus DSM 5631] gi|284011855|gb|ADB57808.1| protein of unknown function DUF88 [Archaeoglobus profundus DSM 5631] Length = 171 Score = 75.4 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 27/167 (16%), Positives = 60/167 (35%), Gaps = 32/167 (19%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 + R++IA+ +DG N+ F+++ ++ + + A + + Sbjct: 25 ESRKRIAVLVDGPNM----LRKEFNLNLSEIRDILKEYGDIKVAKVFLNQYATDK----- 75 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFS 120 L++ + GF+ V +DV +AV+A + ++ L + + Sbjct: 76 ---LVEAVENQGFEPVI--------------TSGDVDVRMAVEAMDLIYNDLIDVLALVT 118 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 D F ++ K+ I+ S L+ AD + L Sbjct: 119 RDADFKAVLKKAMEMGKETIIIGAEPGF----STALKNSADIAIILN 161 >gi|295836648|ref|ZP_06823581.1| conserved hypothetical protein [Streptomyces sp. SPB74] gi|295826135|gb|EFG64694.1| conserved hypothetical protein [Streptomyces sp. SPB74] Length = 310 Score = 75.4 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 39/188 (20%), Positives = 63/188 (33%), Gaps = 32/188 (17%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRS-------RAIVIRAYYYTTVV 53 A+F+D LYA++ L GFD+D + L+ A + ++R Y+Y Sbjct: 33 AIFVDAGYLYAAAGRLVAGTEDRKGFDLDAQGLIDALVDCASHVFPHSRLLRVYWYDGAR 92 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 L K N + +D + D + Sbjct: 93 RRIHTAEQQSIAELP------------DVKVRLGNLNANNQQKGVDSLIRGDIESLARHR 140 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVS-TVLSDPSMASDQLRRQAD--YFMDLAY 168 + V+ GD V A Q +V + +D L +AD +DLA+ Sbjct: 141 AIGDAVLLGGDEDLVPAVEAAQDFGARVHLWGIEAPEGLRNQADPLLWEADAQRTLDLAF 200 Query: 169 LKNEIARD 176 LK +AR Sbjct: 201 LKPYVARR 208 >gi|297157475|gb|ADI07187.1| hypothetical protein SBI_04066 [Streptomyces bingchenggensis BCW-1] Length = 310 Score = 75.4 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 62/189 (32%), Gaps = 31/189 (16%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53 A+F+D +YA++ L F++D L++AF +A ++R Y+Y Sbjct: 41 AIFVDAGYVYAAAGRLVAGTEDRRTFELDAEGLIEAFIDKARTIFPDSRLLRVYWYDGAR 100 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 L K N + +D + D + Sbjct: 101 RRIHTSEQQSIAELP------------DVKVRLGNLNANNQQKGVDSLIRSDLESLARHR 148 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169 + V+ GD + V A Q +V + + ++ L + D DL + Sbjct: 149 AIGDAVLIGGDEDLVSAVEAAQGYGARVHLWGIEAVEGRNQAEPLLWEVDSQRTFDLDFC 208 Query: 170 KNEIARDPD 178 K + R P Sbjct: 209 KPYVTRRPA 217 >gi|172039786|ref|YP_001799500.1| hypothetical protein cur_0106 [Corynebacterium urealyticum DSM 7109] gi|171851090|emb|CAQ04066.1| hypothetical protein cu0106 [Corynebacterium urealyticum DSM 7109] Length = 513 Score = 75.4 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 64/181 (35%), Gaps = 27/181 (14%) Query: 6 EKIALFIDGANL---YASSKALGF----DIDYRKLLKAFRS------RAIVIRAYYYTTV 52 E+ +F+D + L + +S G +ID +++ + + R ++Y + Sbjct: 3 ERTQIFVDTSYLLASFYNSWETGARAQLEIDLPEVVCTLGRIAQDQLKQPIHRQFWYDGI 62 Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS-- 110 ++ G Q+ + E+ G +R + ++D L D + Sbjct: 63 PESGPHRYQRSL-----RSEPGVQLRSGQLIEW----GDRRTQKAVDTRLVADMVLAAVR 113 Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 + +V+ SGD V +V + SM+S LR D L + Sbjct: 114 GNVSDIVLVSGDADMLPGVEEAVDAGIRVHLYGF--GWDSMSSQ-LRFACDTTTILDPRE 170 Query: 171 N 171 + Sbjct: 171 D 171 >gi|282165479|ref|YP_003357864.1| hypothetical protein MCP_2809 [Methanocella paludicola SANAE] gi|282157793|dbj|BAI62881.1| conserved hypothetical protein [Methanocella paludicola SANAE] Length = 188 Score = 75.4 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 54/165 (32%), Gaps = 32/165 (19%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 R IAL +DG N+ F ID + + + + Sbjct: 31 RRNIALLVDGPNM----LRKEFQIDLEVVRDILKRYGDIKVGKVFLN--------QYASD 78 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122 L++ + GF+ + +DV LAVDA E S ++ + I + D Sbjct: 79 KLVEAIENQGFEPII--------------GSGDVDVRLAVDAVELVFSPTIDTIAIVTRD 124 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F ++A K+ + S L+ AD+ + Sbjct: 125 ADFKPVLAKANSHGKETIVFGAEPGL----SIALKNVADFVIVFD 165 >gi|149179181|ref|ZP_01857749.1| hypothetical protein PM8797T_16967 [Planctomyces maris DSM 8797] gi|148841999|gb|EDL56394.1| hypothetical protein PM8797T_16967 [Planctomyces maris DSM 8797] Length = 210 Score = 75.4 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 65/176 (36%), Gaps = 20/176 (11%) Query: 4 PREKIALFIDGANLYASSKALGFD----IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 +++ ++IDG NLY K G+ +D K +A VI Y+T +V P + Sbjct: 8 KKQRTVIYIDGFNLYFGMKDNGWKRYYWLDLWKFGEAISQDREVISVKYFTAIVSKPAAK 67 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCG--------RKRVKSSMDVELAVDAFEQS- 110 + K +++ + + DV +A + Sbjct: 68 NVRQRKFISAQKTLNNPPDIIKGKYYSKTKHCLSCEEPYERHEEKMTDVNIATHLVNDAW 127 Query: 111 -EGLEHLVIFSGDGCFTTLVAAL--QRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163 + + ++ SGD +T + + Q + KKV + P+ S QL+ +F Sbjct: 128 LDLYDVAIVVSGDSDLSTPIRTVNNQFEDKKVIV----GFPPNRHSKQLKGLGSWF 179 >gi|266624411|ref|ZP_06117346.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479] gi|288863732|gb|EFC96030.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479] Length = 259 Score = 75.4 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 31/149 (20%), Positives = 61/149 (40%), Gaps = 24/149 (16%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRK-----LLKAFRSRAIV--IRAYYYTTVVGDPEQ 58 E + +F+D N+Y S K G + + + L++ S + +RAY VG + Sbjct: 18 ENVGIFVDFDNIYYSLKEYGVNPESPEYCVFSLMERIYSINKIRTLRAYADYDQVGVSLK 77 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEH 115 + + ++ NG + + K++ D+EL+VDA E S ++ Sbjct: 78 HLQEMRVQIKNVYGNGLE--------------EEYRKNASDIELSVDALEIYYRSPEIDT 123 Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVST 144 V + D +++ L K K + + Sbjct: 124 FVFLTSDSDMIPIMSRLTYKGKHIHLFCI 152 >gi|20094200|ref|NP_614047.1| hypothetical protein MK0763 [Methanopyrus kandleri AV19] gi|19887222|gb|AAM01977.1| Uncharacterized conserved protein [Methanopyrus kandleri AV19] Length = 179 Score = 75.4 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 31/177 (17%), Positives = 62/177 (35%), Gaps = 32/177 (18%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 IA+ IDG N+ FD+ +++ + + + L+ Sbjct: 24 IAMLIDGPNM----LRKEFDVSLKEVRELVEELGNIRVGLAFLN--------QYASDKLI 71 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCF 125 + + GF +DV LAV+A E S+ ++ + + + D F Sbjct: 72 EAVANQGFVPRVIP--------------GDVDVYLAVEAMELIYSDNVDAIALMTRDTDF 117 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182 ++A + + K ++ S L+ ADY + L K + +E + Sbjct: 118 LPIIAKAKEQGKVTIVIGADPGF----STALQNAADYVIKLKPRKERESEGKEEKPE 170 >gi|282865441|ref|ZP_06274493.1| hypothetical protein SACTEDRAFT_5038 [Streptomyces sp. ACTE] gi|282559914|gb|EFB65464.1| hypothetical protein SACTEDRAFT_5038 [Streptomyces sp. ACTE] Length = 303 Score = 75.1 bits (183), Expect = 4e-12, Method: Composition-based stats. Identities = 33/188 (17%), Positives = 61/188 (32%), Gaps = 31/188 (16%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53 A+F+D +YA++ L FD+D L++AF +A ++R Y+Y Sbjct: 40 AIFVDAGYVYAAAGLLVTGTEDRRSFDLDAEGLIEAFIDKARTIFADSRLLRVYWYDGAR 99 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 L K N + +D + D + Sbjct: 100 RRIHTVEQQSIAELP------------DVKVRLGNLNANNQQKGVDSLIRSDLESLARHR 147 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169 + + GD + V A Q +V + + ++ L + D DL + Sbjct: 148 AISDAALVGGDEDLVSAVEAAQGYGARVHLWGIEAGEGRNQAEPLLWEVDSQRTFDLDFC 207 Query: 170 KNEIARDP 177 + + R P Sbjct: 208 RPYVTRRP 215 >gi|283955630|ref|ZP_06373123.1| hypothetical protein C1336_000040041 [Campylobacter jejuni subsp. jejuni 1336] gi|283792855|gb|EFC31631.1| hypothetical protein C1336_000040041 [Campylobacter jejuni subsp. jejuni 1336] Length = 232 Score = 75.1 bits (183), Expect = 4e-12, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 50/166 (30%), Gaps = 29/166 (17%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 + IA+FID N+ +K D VI Y Q + Sbjct: 3 NKSIAIFIDAENIP--AKYAKSIFDI------ASDYGEVIIKRIYGDWTQKNIQGW---- 50 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGD 122 + ++F K+S D+ L + + ++ VI S D Sbjct: 51 ------REQIAEYSLIAMQQF----NFAANKNSSDMYLITEIMSIFYEKNIDIFVIVSSD 100 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 +T+L+ L+ K+V + S S F L Sbjct: 101 SDYTSLIQKLRENKKQVVGMGLEKSIKSY-----VNAFSEFFYLDK 141 >gi|53804338|ref|YP_114060.1| cold-shock DNA-binding domain-containing protein [Methylococcus capsulatus str. Bath] gi|53758099|gb|AAU92390.1| cold-shock DNA-binding domain protein [Methylococcus capsulatus str. Bath] Length = 305 Score = 75.1 bits (183), Expect = 4e-12, Method: Composition-based stats. Identities = 33/208 (15%), Positives = 72/208 (34%), Gaps = 33/208 (15%) Query: 1 MFDPREKIALFIDGANLYASSKAL------GFDIDYRKLLKAF-----------RSRAIV 43 M +IA+F DG + S + ++ L + + Sbjct: 1 MESKLCRIAVFYDGNYFFKVSNYYLYQHPRRARLSFKGLHEFILAEVSKNEGLDARHCQI 60 Query: 44 IRAYYYTTVVGDPEQQFS----PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMD 99 + A Y+ + + Q D L + + + + + +D Sbjct: 61 VDAAYFRGRLTAQQAQDQDKLFADRIFEDVLMRANITLFQRHLRTRPDGS---FEEKGID 117 Query: 100 VELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS-------TVLSDPS 150 V LA++A+E + + + V+ +GDG F LV L +V +++ + + Sbjct: 118 VWLALEAYEMASLKKYDVCVLVAGDGDFVPLVNKLNTLGSRVMLIAWDFSYVRDGRTYTT 177 Query: 151 MASDQLRRQADYFMDLAYLKNEIARDPD 178 A+ +L + +Y + + + R D Sbjct: 178 QAATELIDRVNYPILMNTEIDSRERRKD 205 >gi|239944100|ref|ZP_04696037.1| hypothetical protein SrosN15_24076 [Streptomyces roseosporus NRRL 15998] gi|239990553|ref|ZP_04711217.1| hypothetical protein SrosN1_24813 [Streptomyces roseosporus NRRL 11379] gi|291447568|ref|ZP_06586958.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] gi|291350515|gb|EFE77419.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] Length = 306 Score = 75.1 bits (183), Expect = 5e-12, Method: Composition-based stats. Identities = 33/188 (17%), Positives = 62/188 (32%), Gaps = 31/188 (16%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53 A+F+D +YA++ L FD+D L++AF +A ++R Y+Y Sbjct: 43 AIFVDAGYVYAAAGLLVTGTEDRRSFDLDAEGLIEAFIDKARTIFADSRLLRVYWYDGAR 102 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 L K N + +D + D + Sbjct: 103 RRIHTTEQQAIAELP------------DVKVRLGNLNANNQQKGVDSLIRTDLESLARHR 150 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169 + + GD + V A Q +V + ++ ++ L + D DL + Sbjct: 151 AISDAALVGGDEDLVSAVEAAQGYGARVHLWGIEAAEGRNQAEPLLWEVDSQRTFDLDFC 210 Query: 170 KNEIARDP 177 + + R P Sbjct: 211 RPYVTRRP 218 >gi|315498578|ref|YP_004087382.1| hypothetical protein Astex_1565 [Asticcacaulis excentricus CB 48] gi|315416590|gb|ADU13231.1| hypothetical protein Astex_1565 [Asticcacaulis excentricus CB 48] Length = 254 Score = 74.7 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 31/176 (17%), Positives = 59/176 (33%), Gaps = 14/176 (7%) Query: 5 REKIALFIDGANLYASSKALGF----DIDYRKLLKAFRSRAIVI-RAYYYTTVVGDPEQQ 59 R++ A++ DG NLY + A +D + L +A V+ R + + + + Sbjct: 30 RKRAAVYYDGFNLYHAVDAYKRPYLKWLDLKALAQAISPSDEVVKRVVWCSAFRPQNKSK 89 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRV------KSSMDVELAVDAFEQSEG- 112 + L G + C + DV LA+ +E Sbjct: 90 MKRHEDYMRALQARGVLCRLGHFVSAIDGCNACGHQWHLAIEKQGDVNLALSIASDAEDN 149 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 + + S DG L+ + K +V V + + R AD +++ Sbjct: 150 LFDVCYLVSADGDHAATARYLKERFPKKELV-LVCPPGRYPNKHILRFADRVVEIE 204 >gi|237800598|ref|ZP_04589059.1| hypothetical protein POR16_17368 [Pseudomonas syringae pv. oryzae str. 1_6] gi|331023458|gb|EGI03515.1| hypothetical protein POR16_17368 [Pseudomonas syringae pv. oryzae str. 1_6] Length = 274 Score = 74.7 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 50/161 (31%), Gaps = 30/161 (18%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 ++A+ +D N+ LK ++ Y L Sbjct: 11 RVAILVDCDNVSPEVLEHA--------LKVVAQFGRIVLRRGYGN-----------HGTL 51 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124 + ++ ++ G K++ D+ LA+DA E + + + D Sbjct: 52 ANKWQEALVRLAFTPCLQYQYASG----KNTSDIALALDALEALFDHRADMFCLVTSDSD 107 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165 F L L+ + V IV D LR +D F + Sbjct: 108 FAYLCRKLRERGASVCIVGE-----PKTPDALRNASDQFFE 143 >gi|332974970|gb|EGK11880.1| hypothetical protein HMPREF9374_1743 [Desmospora sp. 8437] Length = 273 Score = 74.7 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 32/171 (18%), Positives = 58/171 (33%), Gaps = 17/171 (9%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRK-----LLKAFRSRAIVIRAYYYTTVVGDPEQ 58 + I+++ID N+Y K + D+ L+ + + Sbjct: 3 KDKSISIWIDLENVYYGLKKYHMNPDHPDPKHNLFLRLQEHYGR------HKIRMMGVYG 56 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLEH 115 F L P + V + G + K++ D++L +DA + +E Sbjct: 57 DFEQLGPDISMNQLLKKHVHI--HQVHGNGRGEEERKNAADIQLCLDAMDVLHTVSEVET 114 Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 VI S D L+ L + K+V + S + L D F +L Sbjct: 115 FVIVSADQDMIPLMDRLWSRGKRVELFCLQDESLSRDAH-LEAFCDEFYNL 164 >gi|73667756|ref|YP_303771.1| hypothetical protein Mbar_A0207 [Methanosarcina barkeri str. Fusaro] gi|72394918|gb|AAZ69191.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro] Length = 194 Score = 74.7 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 56/168 (33%), Gaps = 32/168 (19%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 R KI L +DG N+ FD++ ++ + + + Sbjct: 23 RRKIGLLVDGPNI----LRKEFDVNLEEIRDVLKDYGNIKIGRVFLN--------QYASD 70 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGD 122 L++ + +G + + S +DV LAV+ E ++ L I + D Sbjct: 71 KLVEAIENHGLEPIIC--------------SSDVDVRLAVEGMELVYNPNIDTLAIVTRD 116 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 F L+ K+ I S L+ ADY + + + Sbjct: 117 ADFKPLLNKANEHGKETIIFGVEPGF----STALKNSADYVILMKKDR 160 >gi|57168636|ref|ZP_00367768.1| conserved hypothetical protein [Campylobacter coli RM2228] gi|305432736|ref|ZP_07401896.1| conserved hypothetical protein [Campylobacter coli JV20] gi|57019917|gb|EAL56597.1| conserved hypothetical protein [Campylobacter coli RM2228] gi|304444245|gb|EFM36898.1| conserved hypothetical protein [Campylobacter coli JV20] Length = 232 Score = 74.7 bits (182), Expect = 5e-12, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 50/165 (30%), Gaps = 29/165 (17%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 + IA+FID N+ +K D +I Y Q + Sbjct: 3 NKSIAIFIDAENIP--AKYAKSIFDI------ASDYGEIIIKRIYGDWTQKNIQAWKEQI 54 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGD 122 + ++F K+S D+ L + + ++ VI S D Sbjct: 55 A----------EYSLIAMQQF----NFAANKNSSDMYLITEIMSIFYEKDIDIFVIVSSD 100 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 +T+L+ L+ K+V + S S F L Sbjct: 101 SDYTSLIQKLRENKKQVIGMGLEKSIKSY-----VNAFSEFFYLD 140 >gi|291437417|ref|ZP_06576807.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] gi|291340312|gb|EFE67268.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] Length = 319 Score = 74.7 bits (182), Expect = 6e-12, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 60/187 (32%), Gaps = 31/187 (16%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53 A+F+D LYA++ L FD+D L+ A RA ++R Y+Y Sbjct: 56 AIFVDAGYLYAAAGRLVAGTEDRRAFDLDAEGLIDALIDRARTVFADSRLLRVYWYDGAR 115 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 L K N + +D + D + Sbjct: 116 RRIHTAEQQSIAELP------------DVKVRLGNLNANNQQKGVDSLIRTDLESLARHR 163 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169 + + GD + V A Q +V + + ++ L + D +DL + Sbjct: 164 AISDAALLGGDEDLVSAVEAAQGYGARVHLWGIEAPEGRNQAEPLLWEVDSQRTLDLDFF 223 Query: 170 KNEIARD 176 K ++R Sbjct: 224 KPYVSRR 230 >gi|150400659|ref|YP_001324425.1| hypothetical protein Maeo_0221 [Methanococcus aeolicus Nankai-3] gi|150013362|gb|ABR55813.1| protein of unknown function DUF88 [Methanococcus aeolicus Nankai-3] Length = 193 Score = 74.3 bits (181), Expect = 7e-12, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 57/164 (34%), Gaps = 32/164 (19%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 ++AL IDG N+ F+ID K+ + V+ Y L Sbjct: 23 RMALLIDGPNM----LRKEFNIDLDKIREVLDEFGSVVVGRVYLN--------QYASDKL 70 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124 ++ + G++ +DVE+AVD E + ++ ++ + D Sbjct: 71 IEAIANQGYEPKV--------------SAGDVDVEMAVDGTELIFNDTIDTIIYMTRDAD 116 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F + + K + I+ S ++ ADY + + Sbjct: 117 FLPAIRKAKEHGKNIIIIGAEPGF----STAIQNIADYVIKIED 156 >gi|328884857|emb|CCA58096.1| hypothetical protein SVEN_4810 [Streptomyces venezuelae ATCC 10712] Length = 322 Score = 74.3 bits (181), Expect = 7e-12, Method: Composition-based stats. Identities = 31/188 (16%), Positives = 62/188 (32%), Gaps = 31/188 (16%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53 A+F+D ++A++ L FD+D L++AF +A ++R Y+Y Sbjct: 58 AIFVDAGYVHAAAGLLVAGTEDRRSFDLDAEGLIEAFIDKARTIFADSRLLRVYWYDGAR 117 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 L K N + +D + D + Sbjct: 118 RRIHTPEQQAIAELP------------DVKVRLGNLNANNQQKGVDSLIRTDLESLARHR 165 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169 + + GD + V A Q +V + ++ ++ L + D +L + Sbjct: 166 AISDAALVGGDEDLVSAVEAAQGYGARVHLWGIEAAEGRNQAEALLWEVDSQRTFELDFC 225 Query: 170 KNEIARDP 177 + + R P Sbjct: 226 RPYVTRRP 233 >gi|182436154|ref|YP_001823873.1| hypothetical protein SGR_2361 [Streptomyces griseus subsp. griseus NBRC 13350] gi|178464670|dbj|BAG19190.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 303 Score = 74.3 bits (181), Expect = 8e-12, Method: Composition-based stats. Identities = 32/188 (17%), Positives = 62/188 (32%), Gaps = 31/188 (16%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53 A+F+D +YA++ L FD+D L++AF +A ++R Y+Y Sbjct: 40 AIFVDAGYVYAAAGLLVTGTEDRRSFDLDAEGLIEAFIDKARTIFADSRLLRVYWYDGAR 99 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 L K N + +D + D + Sbjct: 100 RRIHTTEQQAIAELP------------DVKVRLGNLNANNQQKGVDSLIRTDLESLARHR 147 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169 + + GD + V A Q +V + ++ ++ L + D +L + Sbjct: 148 AISDAALVGGDEDLVSAVEAAQGYGARVHLWGIEAAEGRNQAEPLLWEVDSQRTFELDFC 207 Query: 170 KNEIARDP 177 + + R P Sbjct: 208 RPYVTRRP 215 >gi|326776780|ref|ZP_08236045.1| Domain of unknown function DUF88 protein [Streptomyces cf. griseus XylebKG-1] gi|326657113|gb|EGE41959.1| Domain of unknown function DUF88 protein [Streptomyces cf. griseus XylebKG-1] Length = 303 Score = 73.9 bits (180), Expect = 8e-12, Method: Composition-based stats. Identities = 32/188 (17%), Positives = 62/188 (32%), Gaps = 31/188 (16%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53 A+F+D +YA++ L FD+D L++AF +A ++R Y+Y Sbjct: 40 AIFVDAGYVYAAAGLLVTGTEDRRSFDLDAEGLIEAFIDKARTIFADSRLLRVYWYDGAR 99 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 L K N + +D + D + Sbjct: 100 RRIHTTEQQAIAELP------------DVKVRLGNLNANNQQKGVDSLIRTDLESLARHR 147 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169 + + GD + V A Q +V + ++ ++ L + D +L + Sbjct: 148 AISDAALVGGDEDLVSAVEAAQGYGARVHLWGIEAAEGRNQAEPLLWEVDSQRTFELDFC 207 Query: 170 KNEIARDP 177 + + R P Sbjct: 208 RPYVTRRP 215 >gi|85703543|ref|ZP_01034647.1| hypothetical protein ROS217_22417 [Roseovarius sp. 217] gi|85672471|gb|EAQ27328.1| hypothetical protein ROS217_22417 [Roseovarius sp. 217] Length = 242 Score = 73.9 bits (180), Expect = 8e-12, Method: Composition-based stats. Identities = 26/159 (16%), Positives = 51/159 (32%), Gaps = 37/159 (23%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 ++++F+D N+ S +D L +RAY ++ D ++ Sbjct: 14 RLSVFVDADNI--SVTHAQTILD----LARRHGAPDQLRAYGNVGLLPDWDK-------- 59 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDGC 124 +F + K++ D+ + +DA E S+ +++ S D Sbjct: 60 -------------VPGFQFIHSG---SGKNATDMLMCIDAMERALSDQCAAVLLVSSDQD 103 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163 FT L L+ V + R F Sbjct: 104 FTHLATRLRGYGLTVIGAGEAKTLER-----FRAACSEF 137 >gi|256785360|ref|ZP_05523791.1| hypothetical protein SlivT_12796 [Streptomyces lividans TK24] Length = 298 Score = 73.9 bits (180), Expect = 9e-12, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 61/187 (32%), Gaps = 31/187 (16%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53 A+F+D LYA++ L FD+D L++A RA ++R Y+Y Sbjct: 34 AIFVDAGYLYAAAGRLVAGTEDRRAFDLDAEGLIEALIDRARNIFADSRLLRVYWYDGAR 93 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 L K N + +D + D + Sbjct: 94 RRIHTAEQQSIAELP------------DVKVRLGNLNANNQQKGVDSLIRTDLESLARHR 141 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169 + + GD + V A Q +V + + ++ L + D +DL + Sbjct: 142 AISDAALLGGDEDLVSAVEAAQGFGARVHLWGIEAPEGRNQAEPLLWEVDSQRTLDLDFF 201 Query: 170 KNEIARD 176 K ++R Sbjct: 202 KPYVSRR 208 >gi|21223533|ref|NP_629312.1| hypothetical protein SCO5164 [Streptomyces coelicolor A3(2)] gi|289769257|ref|ZP_06528635.1| conserved hypothetical protein [Streptomyces lividans TK24] gi|9714449|emb|CAC01365.1| hypothetical protein [Streptomyces coelicolor A3(2)] gi|289699456|gb|EFD66885.1| conserved hypothetical protein [Streptomyces lividans TK24] Length = 301 Score = 73.9 bits (180), Expect = 9e-12, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 61/187 (32%), Gaps = 31/187 (16%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53 A+F+D LYA++ L FD+D L++A RA ++R Y+Y Sbjct: 37 AIFVDAGYLYAAAGRLVAGTEDRRAFDLDAEGLIEALIDRARNIFADSRLLRVYWYDGAR 96 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 L K N + +D + D + Sbjct: 97 RRIHTAEQQSIAELP------------DVKVRLGNLNANNQQKGVDSLIRTDLESLARHR 144 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169 + + GD + V A Q +V + + ++ L + D +DL + Sbjct: 145 AISDAALLGGDEDLVSAVEAAQGFGARVHLWGIEAPEGRNQAEPLLWEVDSQRTLDLDFF 204 Query: 170 KNEIARD 176 K ++R Sbjct: 205 KPYVSRR 211 >gi|300933975|ref|ZP_07149231.1| hypothetical protein CresD4_07892 [Corynebacterium resistens DSM 45100] Length = 482 Score = 73.9 bits (180), Expect = 9e-12, Method: Composition-based stats. Identities = 30/181 (16%), Positives = 65/181 (35%), Gaps = 27/181 (14%) Query: 6 EKIALFIDGANL---YASSKALGF----DIDYRKLLKAFRS------RAIVIRAYYYTTV 52 E+ +++D + L + ++ G +ID +++ + + V R ++Y + Sbjct: 3 ERTQVYVDTSYLLASFYNAWETGARAQLEIDLPEVVSVLSTMVQNQLKQPVHRQFWYDGI 62 Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS-- 110 + ++ G Q+ A E+ G +R + ++D L D + Sbjct: 63 PENGPHRYQRSL-----RSEPGVQLRAGQLIEW----GDRRTQKAVDTRLVADMVIAAMK 113 Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 + +V+ SGD V +V + S+QLR D L + Sbjct: 114 GQVSDIVLVSGDADMLPGVEEAVAAGIRVHLYGFG---WDSMSNQLRYACDTTTILDPRE 170 Query: 171 N 171 + Sbjct: 171 D 171 >gi|302553970|ref|ZP_07306312.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM 40736] gi|302471588|gb|EFL34681.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM 40736] Length = 305 Score = 73.9 bits (180), Expect = 9e-12, Method: Composition-based stats. Identities = 33/187 (17%), Positives = 60/187 (32%), Gaps = 31/187 (16%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53 A+F+D LYA++ L FD+D L+ A +A ++R Y+Y Sbjct: 42 AIFVDAGYLYAAAGRLVAGTEDRRAFDLDPEGLIDALIDKARTIFADSRLLRVYWYDGAR 101 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 L K N + +D + D + Sbjct: 102 RRIHTAEQQSIAELP------------DVKVRLGNLNANNQQKGVDSLIRTDLESLARHR 149 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169 + + GD + V A Q +V + + ++ L + D +DL + Sbjct: 150 AISDAALLGGDEDLVSAVEAAQGYGARVHLWGIEAPEGRNQAEPLLWEVDSQRTLDLDFF 209 Query: 170 KNEIARD 176 K ++R Sbjct: 210 KPYVSRR 216 >gi|14520299|ref|NP_125774.1| hypothetical protein PAB0043 [Pyrococcus abyssi GE5] gi|5457514|emb|CAB49005.1| Conserved archaebacterial protein, DUF88 family [Pyrococcus abyssi GE5] Length = 162 Score = 73.9 bits (180), Expect = 9e-12, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 58/168 (34%), Gaps = 32/168 (19%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 + I L IDG N+ F I + KA + A Sbjct: 21 KTIGLIIDGPNI----LRKEFGIKLEDIKKALERIGKIRVAKVVLNQYAP--------QG 68 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDG 123 L++ + GF+ + V DV +A++A E ++ + + + D Sbjct: 69 LIEAVVNQGFEPII--------------VAGDTDVRMAIEAMELIYNADVDVIALATRDA 114 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 F L++ +RK K+ ++ S L+ ADY + + K Sbjct: 115 DFLPLISEAKRKGKETVVIGVEPGF----SVALQNAADYIIKMEKKKE 158 >gi|55378280|ref|YP_136130.1| hypothetical protein rrnAC1502 [Haloarcula marismortui ATCC 43049] gi|55231005|gb|AAV46424.1| unknown [Haloarcula marismortui ATCC 43049] Length = 148 Score = 73.9 bits (180), Expect = 9e-12, Method: Composition-based stats. Identities = 33/166 (19%), Positives = 56/166 (33%), Gaps = 31/166 (18%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 D +++ LF+DG N+ FD+D ++ + Y + Sbjct: 12 DSPQRVGLFVDGPNV----LRSEFDVDLDEVRDIAAEYGPLAVTRLYV--------DQNA 59 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFS 120 L+ GF+V +DV LAVDA + ++ L + S Sbjct: 60 SPGLIQAAEARGFEVRT--------------TSGDVDVRLAVDATNAAVAGQIDVLAVAS 105 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 D F + R+ K ++ SD LR A+ + L Sbjct: 106 RDTDFKPALEVAAREGVKTVAIAPGEYGR---SDALRNAAEDAVTL 148 >gi|306834717|ref|ZP_07467784.1| conserved hypothetical protein [Corynebacterium accolens ATCC 49726] gi|304569388|gb|EFM44886.1| conserved hypothetical protein [Corynebacterium accolens ATCC 49726] Length = 384 Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 29/181 (16%), Positives = 56/181 (30%), Gaps = 27/181 (14%) Query: 6 EKIALFIDGANL---YASSKALGF----DIDYRKLLKAFRS------RAIVIRAYYYTTV 52 E+ +F+D + L + +S G +ID +++ + R Y+Y + Sbjct: 3 ERTLVFVDTSYLLASFYNSWETGARAQLEIDLPEVVSTMGGMIEEQLGNPIQRQYWYDGI 62 Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS-- 110 ++ + G Q+ E+ G +R + +D L D + Sbjct: 63 PDTGPHRYQRALRTCE-----GVQLRTGQLIEW----GERRTQKGVDTRLVADMVMAAVK 113 Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 V+ SGD +V + S LR D L + Sbjct: 114 NQFTDFVLVSGDADMIPGAQTAVDNGIRVHLYGFG---WDSMSAALRHTCDSTTILDPRE 170 Query: 171 N 171 + Sbjct: 171 D 171 >gi|227502160|ref|ZP_03932209.1| conserved hypothetical protein [Corynebacterium accolens ATCC 49725] gi|227076984|gb|EEI14947.1| conserved hypothetical protein [Corynebacterium accolens ATCC 49725] Length = 391 Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 29/181 (16%), Positives = 56/181 (30%), Gaps = 27/181 (14%) Query: 6 EKIALFIDGANL---YASSKALGF----DIDYRKLLKAFRS------RAIVIRAYYYTTV 52 E+ +F+D + L + +S G +ID +++ + R Y+Y + Sbjct: 3 ERTLVFVDTSYLLASFYNSWETGARAQLEIDLPEVVSTMGGMIEEQLGNPIQRQYWYDGI 62 Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS-- 110 ++ + G Q+ E+ G +R + +D L D + Sbjct: 63 PDTGPHRYQRALRTCE-----GVQLRTGQLIEW----GERRTQKGVDTRLVADMVMAAVK 113 Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 V+ SGD +V + S LR D L + Sbjct: 114 NQFTDFVLVSGDADMIPGAQTAVDNGIRVHLYGFG---WDSMSAALRHTCDSTTILDPRE 170 Query: 171 N 171 + Sbjct: 171 D 171 >gi|239929080|ref|ZP_04686033.1| hypothetical protein SghaA1_12721 [Streptomyces ghanaensis ATCC 14672] Length = 297 Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 60/187 (32%), Gaps = 31/187 (16%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53 A+F+D LYA++ L FD+D L+ A RA ++R Y+Y Sbjct: 34 AIFVDAGYLYAAAGRLVAGTEDRRAFDLDAEGLIDALIDRARTVFADSRLLRVYWYDGAR 93 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 L K N + +D + D + Sbjct: 94 RRIHTAEQQSIAELP------------DVKVRLGNLNANNQQKGVDSLIRTDLESLARHR 141 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169 + + GD + V A Q +V + + ++ L + D +DL + Sbjct: 142 AISDAALLGGDEDLVSAVEAAQGYGARVHLWGIEAPEGRNQAEPLLWEVDSQRTLDLDFF 201 Query: 170 KNEIARD 176 K ++R Sbjct: 202 KPYVSRR 208 >gi|18977686|ref|NP_579043.1| hypothetical protein PF1314 [Pyrococcus furiosus DSM 3638] gi|18893418|gb|AAL81438.1| hypothetical protein PF1314 [Pyrococcus furiosus DSM 3638] Length = 185 Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 37/163 (22%), Positives = 58/163 (35%), Gaps = 25/163 (15%) Query: 7 KIALFIDGANLYASSKA-------LGFDIDYRKLLKAFRS-RAIVIRAYYYTTVVGDPEQ 58 K A+ IDG N+ K L DID+RK + +S V A Y Sbjct: 2 KAAVLIDGENVVMCLKNALGGKVQLDRDIDWRKFFEYLKSLGYEVTIARIYAN-----PF 56 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEH 115 F + + L G +VV + KS+ D + VD ++ Sbjct: 57 IFLKNPHIANNLEKMGIKVVLAESTMKENGP-----KSTTDATMIVDGMSILYERPAIDA 111 Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRR 158 L+I SGD F L + + V V+ P ++ ++ Sbjct: 112 LIIVSGDRDFLPLAEKARELGRTVLFVAF----PDSTANVIKN 150 >gi|319442042|ref|ZP_07991198.1| hypothetical protein CvarD4_09805 [Corynebacterium variabile DSM 44702] Length = 456 Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 63/181 (34%), Gaps = 27/181 (14%) Query: 6 EKIALFIDGANL---YASSKALGF----DIDYRKLLKAFRS------RAIVIRAYYYTTV 52 E+ +F+D + L + +S G +ID +++ + V R +Y + Sbjct: 3 ERTLVFVDTSYLLASFYNSWETGARSQLEIDLPEVVSVIQRMAVNQLDQPVHRQNWYDGI 62 Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAF--EQS 110 ++ G Q+ A E+ G +R + ++D L D + Sbjct: 63 PDSGPHRYQRAL-----RSEPGVQLRAGQLIEW----GDRRTQKAVDTRLVADMVKASLT 113 Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 +++ SGD V +V + SM+S+ LR D L + Sbjct: 114 GTCSDIILVSGDADMIPGVEEAVDAGVRVHLYGF--GWDSMSSN-LRFACDSTTILDPRE 170 Query: 171 N 171 + Sbjct: 171 D 171 >gi|253565602|ref|ZP_04843057.1| cold-shock protein DNA-binding [Bacteroides sp. 3_2_5] gi|251945881|gb|EES86288.1| cold-shock protein DNA-binding [Bacteroides sp. 3_2_5] Length = 208 Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 72/207 (34%), Gaps = 25/207 (12%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M + I +FIDG ++AL + + F AY Y + Sbjct: 1 MIESITSIGIFIDGGYFTKINQALEEKLSLNIDITFFFKFIKEKIAYEYNLNTEFCQITE 60 Query: 61 SPL-------------------HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVE 101 S D L N K +E + ++ +DV Sbjct: 61 SHYFRGRYRVNDANNKHLLFSERKFEDSLIENDVIFHYKHLREIQKEGEINVIEKGIDVW 120 Query: 102 LAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQ 159 A++A+E S + +++ +GD L+ L+ +++ LS S + LR + Sbjct: 121 FALEAYELSLFRKFDFVILITGDADHEMLIKKLKALKIHTILLTWDLSPESATARLLREE 180 Query: 160 ADYFMDLAYL----KNEIARDPDEDKK 182 A ++L+ + K+ I + +K Sbjct: 181 ACKHIELSEIAIEDKDLIKKICRSKQK 207 >gi|330981753|gb|EGH79856.1| hypothetical protein PSYAP_24831 [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 197 Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 29/76 (38%), Gaps = 7/76 (9%) Query: 94 VKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151 K++ D+ +AVDA + ++ + S D FT LV L+ + K+V + Sbjct: 7 GKNATDMAMAVDAMDVLFNKPVDVFCLVSSDCDFTPLVMRLRAEGKQVVGFGERKAPEP- 65 Query: 152 ASDQLRRQADYFMDLA 167 F+ Sbjct: 66 ----FVNACSRFLYFD 77 >gi|18978412|ref|NP_579769.1| hypothetical protein PF2040 [Pyrococcus furiosus DSM 3638] gi|18894254|gb|AAL82164.1| hypothetical protein PF2040 [Pyrococcus furiosus DSM 3638] Length = 183 Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 67/179 (37%), Gaps = 32/179 (17%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 ++IALF+DG N+ K LG + +++A + A Sbjct: 26 KRIALFVDGPNILR--KELGIHL--EDIVEALSKLGNIRVAKVILNQYAP--------QS 73 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDG 123 L++ + GF+ V V + V++AV+A + ++ + + + + Sbjct: 74 LIEAVSNQGFEPVI--------------VAGEIGVKMAVEAMREVYNPNIDMIALATRNT 119 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182 F ++ + K K+ I+ S L+ ADY + L +I ED + Sbjct: 120 EFVPIILKAKEKGKETAIIGVEHGL----SSALKHAADYVIILKPRGEKIEERHHEDSE 174 >gi|288932625|ref|YP_003436685.1| hypothetical protein Ferp_2286 [Ferroglobus placidus DSM 10642] gi|288894873|gb|ADC66410.1| protein of unknown function DUF88 [Ferroglobus placidus DSM 10642] Length = 161 Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 62/166 (37%), Gaps = 32/166 (19%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 R+KI + +DG N+ F+++ +++ + S V A + + Sbjct: 23 RKKIGVLVDGPNM----LRKEFNLNLKEIREILDSYGDVKIAKVFINQYAGEK------- 71 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGD 122 L++ + GF+ V +DV++AV+A E ++ L + + D Sbjct: 72 -LVEAIENQGFEPVV--------------TSGDVDVKMAVEAMEIIYNDSIDVLALVTRD 116 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F ++ K K+ I+ S L+ AD + L Sbjct: 117 ADFKAVLQKAMEKGKETIIIGAEPGF----SAALKNAADIAICLNE 158 >gi|124265642|ref|YP_001019646.1| hypothetical protein Mpe_A0449 [Methylibium petroleiphilum PM1] gi|124258417|gb|ABM93411.1| conserved hypothetical protein [Methylibium petroleiphilum PM1] Length = 251 Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 25/173 (14%), Positives = 52/173 (30%), Gaps = 27/173 (15%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M P + AL +D N+ ++ + + + ++ Y +V Sbjct: 1 MTTPTIRTALLVDADNV-------KVELVAEVIERLQAAGRVLQHRRAYGSV-------- 45 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVI 118 + + + ++ D+ LA+DA E + ++ +V+ Sbjct: 46 QKATEFAALSQDHAIRFL----------PSTFAGPNATDLALAIDAVELVLRQPVDEVVL 95 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 S D F L+ L+ +V R D F L + Sbjct: 96 VSSDRDFAPLIVRLRELGCRVVGYGQHGKTAQDVERDYLRVYDEFHVLGAARP 148 >gi|300859441|ref|YP_003784424.1| hypothetical protein cpfrc_02024 [Corynebacterium pseudotuberculosis FRC41] gi|300686895|gb|ADK29817.1| hypothetical protein cpfrc_02024 [Corynebacterium pseudotuberculosis FRC41] gi|302207120|gb|ADL11462.1| Conserved hypothetical protein [Corynebacterium pseudotuberculosis C231] gi|302331680|gb|ADL21874.1| Conserved hypothetical protein [Corynebacterium pseudotuberculosis 1002] gi|308277373|gb|ADO27272.1| Conserved hypothetical protein [Corynebacterium pseudotuberculosis I19] Length = 460 Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 62/181 (34%), Gaps = 27/181 (14%) Query: 6 EKIALFIDGANL---YASSKALGF----DIDYRKLLKAFRS------RAIVIRAYYYTTV 52 E+ +F+D + L + +S +G +ID +++ S V R +Y + Sbjct: 3 ERTQVFVDTSYLLASFYNSWEIGARAQLEIDLPEVVATLGSMIQSQLGQPVHRQLWYDGI 62 Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG 112 ++ D G Q+ A E+ G +R + +D L D Sbjct: 63 PDSGPHRYQRALRTCD-----GVQLRAGQLIEW----GERRTQKGVDTRLVADMVLAGAR 113 Query: 113 --LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 +V+ SGD V +V + SM+S LR D L + Sbjct: 114 REFTDIVLVSGDADMIPGVQEAVNAGVRVHLYGF--GWDSMSS-ALRHCCDSTTILDPRE 170 Query: 171 N 171 + Sbjct: 171 D 171 >gi|116754600|ref|YP_843718.1| hypothetical protein Mthe_1300 [Methanosaeta thermophila PT] gi|116666051|gb|ABK15078.1| protein of unknown function DUF88 [Methanosaeta thermophila PT] Length = 162 Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 54/166 (32%), Gaps = 32/166 (19%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 R+KI L +DG N+ F +D ++ R + + Sbjct: 20 RKKIGLLVDGPNM----LRKEFQMDLEEIRNILRDYGDIKVGKVFLN--------QYASE 67 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGD 122 L++ + GF+ V S +DV +AV+ + ++ + + + D Sbjct: 68 KLVEAVENQGFEPVICT--------------SDVDVRMAVEGVDMIYNPVIDTIALVTRD 113 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 ++ K+ I S LR ADY + L Sbjct: 114 ADLKPVLMKAMEHGKETIIFGAEPGF----SVALRNSADYVIVLRN 155 >gi|312115431|ref|YP_004013027.1| hypothetical protein Rvan_2717 [Rhodomicrobium vannielii ATCC 17100] gi|311220560|gb|ADP71928.1| hypothetical protein Rvan_2717 [Rhodomicrobium vannielii ATCC 17100] Length = 626 Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 27/180 (15%), Positives = 58/180 (32%), Gaps = 31/180 (17%) Query: 9 ALFIDGANLYASSKAL------GFDIDYRKLLKAFRSRAIVIR--------------AYY 48 ALF+D N+Y S + F + + + + ++R A Sbjct: 12 ALFVDFDNVYLSLRRQSEEAAGRFARNPAEWMARIATGG-LVRFKSHSDYVRRRFAVARC 70 Query: 49 YTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA-- 106 Y + P P F + + K+ D+++A D Sbjct: 71 YGNPGRKLISRGGPHDPHNFADVRVNFMMAGLEVV--DCQPLSNQFKNGTDIKIACDIRD 128 Query: 107 -FEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165 E ++ SGD FT ++ L+ ++ + + +D + +D +++ Sbjct: 129 FLEHPTRFGEFIVLSGDADFTPVLHHLRSHDRRTVVYA-----NESTADIYKAFSDGWIE 183 >gi|192362254|ref|YP_001981906.1| hypothetical protein CJA_1417 [Cellvibrio japonicus Ueda107] gi|190688419|gb|ACE86097.1| conserved hypothetical protein [Cellvibrio japonicus Ueda107] Length = 178 Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 24/160 (15%), Positives = 52/160 (32%), Gaps = 22/160 (13%) Query: 20 SSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVA 79 + + +D+ KL + +R L NGF+V Sbjct: 37 NVCDHSWKLDFGKLFQFAGGEKAEVRKAALFGSRPPKNDS------LWVAAQKNGFEVTT 90 Query: 80 KVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGL----EHLVIFSGDGCFTTLVAALQRK 135 + + +D ++ E S + + + + SGD + + L+++ Sbjct: 91 -------YDRNVANAEKKIDTDIVATMIEDSYEILQPGDEVTLVSGDSDYVPAIEKLKKR 143 Query: 136 VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 V +V A+ +L+ A F +L + + R Sbjct: 144 GIAVHVV-----FWKHAARELKEAASTFTELDPYLDHLKR 178 >gi|254417374|ref|ZP_05031116.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC 7420] gi|196175809|gb|EDX70831.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC 7420] Length = 99 Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 4/69 (5%) Query: 99 DVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRR 158 DVELA+D E ++ + ++ SGDG F + +Q+ ++V +VS + S +L + Sbjct: 26 DVELALDLVELADTYDTAILVSGDGDFVPAIERIQQLSRRVEVVS----YRATTSQKLMQ 81 Query: 159 QADYFMDLA 167 AD +++L Sbjct: 82 LADNYLNLE 90 >gi|320008714|gb|ADW03564.1| hypothetical protein Sfla_2131 [Streptomyces flavogriseus ATCC 33331] Length = 303 Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 32/187 (17%), Positives = 60/187 (32%), Gaps = 31/187 (16%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53 A+F+D +YA++ L FD+D L++AF +A ++R Y+Y Sbjct: 40 AIFVDAGYVYAAAGLLVTGTEDRRSFDLDAEGLIEAFIDKARTIFADSRLLRVYWYDGAR 99 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 L K N + +D + D + Sbjct: 100 RRIHTVEQQSIAELP------------DVKVRLGNLNANNQQKGVDSLIRTDLESLARHR 147 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169 + + GD + V A Q +V + + ++ L + D DL + Sbjct: 148 AISDAALVGGDEDLVSAVEAAQGYGARVHLWGIEAGEGRNQAEPLLWEVDSQRTFDLDFC 207 Query: 170 KNEIARD 176 + + R Sbjct: 208 RPYVTRR 214 >gi|254456978|ref|ZP_05070406.1| protein containing DUF88 [Campylobacterales bacterium GD 1] gi|207085770|gb|EDZ63054.1| protein containing DUF88 [Campylobacterales bacterium GD 1] Length = 257 Score = 73.1 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 27/170 (15%), Positives = 51/170 (30%), Gaps = 26/170 (15%) Query: 1 MFDPREK-IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 M + + IA+FID N+ SSK + D V Y Sbjct: 1 MKNQHKNNIAMFIDCDNV--SSKYIESIFD------DLSQYGTVNIRRAYGDWKDKQLYG 52 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119 + + + K ++F G+ +M +++ ++ LE +V+ Sbjct: 53 WENILQDYN----------IKPIQQFAYTKGKNATDIAMIIDIMDIL--YTKDLEAIVLI 100 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 + D FT +V + V F+ + L Sbjct: 101 TSDSDFTPIVTRILSDGLTVYGYGEAK-----TPMAFVNACSQFIYVEKL 145 >gi|240103392|ref|YP_002959701.1| hypothetical protein TGAM_1335 [Thermococcus gammatolerans EJ3] gi|239910946|gb|ACS33837.1| Conserved hypothetical protein [Thermococcus gammatolerans EJ3] Length = 166 Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 32/165 (19%), Positives = 57/165 (34%), Gaps = 32/165 (19%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 P++KI L IDG N+ F I +++A V A Sbjct: 18 EHPKKKIGLIIDGPNI----LRKEFGIKLEDIIEALNRIGSVRIAKVILNQYAP------ 67 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIF 119 L++ + G + V V DV +A++ E + ++ + + Sbjct: 68 --QGLVEAIVNQGLEPVI--------------VAGDTDVRVAIETMEMIYTADVDVIALA 111 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 S D F L+ +R K+ ++ S L+ ADY + Sbjct: 112 SRDADFLPLIIEAKRHGKETVVIGVEPGF----SVALQNAADYVI 152 >gi|237784719|ref|YP_002905424.1| hypothetical protein ckrop_0084 [Corynebacterium kroppenstedtii DSM 44385] gi|237757631|gb|ACR16881.1| hypothetical protein ckrop_0084 [Corynebacterium kroppenstedtii DSM 44385] Length = 639 Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 63/181 (34%), Gaps = 27/181 (14%) Query: 6 EKIALFIDGANL---YASSKALGF----DIDYRKLLKAFRS------RAIVIRAYYYTTV 52 E+ +F+D + L + +S G +ID ++ V R +Y + Sbjct: 3 ERTLVFVDTSYLLASFYNSWEEGARTQLEIDLPEVCSVLDRMITQHVGQPVQRQNWYDGI 62 Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS-- 110 ++ +D G Q+ A + E G++R + ++D L D + Sbjct: 63 PDSGPHRYQRALRTVD-----GVQLRAGLLIE----TGQRRTQKAVDTRLVADMILAAVR 113 Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 + +V+ SGD V +V + S+ LR + D L + Sbjct: 114 QQCSDMVLVSGDQDMIPGVVEASAMGVRVHLYGFS---WDSMSNALRHKCDSITVLDPRE 170 Query: 171 N 171 + Sbjct: 171 D 171 >gi|229489850|ref|ZP_04383707.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229323360|gb|EEN89124.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length = 334 Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 58/181 (32%), Gaps = 33/181 (18%) Query: 10 LFIDGANLYASS--------KALGFDIDYRKLLKAFRSRAIV------IRAYYYTTVVGD 55 L+ID L AS+ G +DY KL+ + + A V +R ++Y + Sbjct: 7 LYIDAGYLLASAATRVTGTSLRGGIHVDYSKLIGSLLAAAEVKAGLPMLRVHWYDSARNG 66 Query: 56 PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--L 113 G K G + +D+ + +D + Sbjct: 67 IPDAQQ---------ERIGELPK---VKLRLGRFGVNGEQKGVDLRMGLDLVAHARNRAS 114 Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVS--TVLSDPSMASDQLRRQADYFMDLAYLKN 171 + + SGD V Q +V +++ TV S L R AD L + Sbjct: 115 DVFFLVSGDDDLAEAVEEAQVHGVQVLLLAVPTVEGKAHGVSRHLIRAADE---LDNIDG 171 Query: 172 E 172 E Sbjct: 172 E 172 >gi|89900334|ref|YP_522805.1| hypothetical protein Rfer_1542 [Rhodoferax ferrireducens T118] gi|89345071|gb|ABD69274.1| conserved hypothetical protein [Rhodoferax ferrireducens T118] Length = 272 Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 28/189 (14%), Positives = 55/189 (29%), Gaps = 39/189 (20%) Query: 3 DPREKIALFIDGANLYASSKALGFD-----------------IDYRKLLKAFRSRAIVIR 45 + + +AL+ D NL+AS F +D + +++ S + Sbjct: 7 EENKSVALYWDFENLHASLCEARFGEGAYNKPDGRFKAQEPLVDVQAIVELAASFGPIAI 66 Query: 46 AYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVD 105 Y + D L +++ K+ D++L +D Sbjct: 67 NRAYCN--------WQYFGRYRDALLQGAVELIQL-------FSPGASAKNGADIKLCLD 111 Query: 106 AFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162 A E + +VI GD F + ++ + + V S + Sbjct: 112 AVEDISRFGHIGTIVIVGGDSDFMPVSQKIKAAGRTLIGVGARKSTNRHWAKS----CHE 167 Query: 163 FMDLAYLKN 171 F L Sbjct: 168 FRYYENLVE 176 >gi|15679895|ref|NP_277013.1| hypothetical protein MTH1913 [Methanothermobacter thermautotrophicus str. Delta H] gi|2623047|gb|AAB86373.1| conserved protein [Methanothermobacter thermautotrophicus str. Delta H] Length = 173 Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 28/181 (15%), Positives = 57/181 (31%), Gaps = 35/181 (19%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 + I L +DG N+ F ++ + + + Sbjct: 23 EKNIGLLVDGPNM----LRKEFSLNLDLVRQIMSEYGNMRVGKV--------LLNQYASD 70 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGD 122 L++ + GF + V DV +AV+A E ++ + + + D Sbjct: 71 KLIEAIVNQGFTPIV--------------VAWDTDVYMAVEAMELIYNPNIDIIALMTRD 116 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL--AYLKNEIAR-DPDE 179 F ++ + K ++ S L+ AD+ + L + R P+E Sbjct: 117 ADFLPIINKAKENGKDTIVIGAEPGF----SAALQNSADHAIILKPENSRPRKKRATPEE 172 Query: 180 D 180 D Sbjct: 173 D 173 >gi|29829642|ref|NP_824276.1| hypothetical protein SAV_3100 [Streptomyces avermitilis MA-4680] gi|29606750|dbj|BAC70811.1| hypothetical protein [Streptomyces avermitilis MA-4680] Length = 298 Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 32/187 (17%), Positives = 60/187 (32%), Gaps = 31/187 (16%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53 A+F+D LYA++ L F++D L++A +A ++R Y+Y Sbjct: 34 AIFVDAGYLYAAAGRLVAGTEDRRAFELDAEGLIEALIDKARTIFADSRLLRVYWYDGAR 93 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 L K N + +D + D + Sbjct: 94 RRIHTAEQQSIAELP------------DVKVRLGNLNANNQQKGVDSLIRTDLESLARHR 141 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169 + + GD + V A Q +V + + ++ L + D DL + Sbjct: 142 AISDAALLGGDEDLVSAVEAAQGYGARVHLWGIEAPEGRNQAEPLLWEVDSQRTFDLDFF 201 Query: 170 KNEIARD 176 K ++R Sbjct: 202 KPYVSRR 208 >gi|150021343|ref|YP_001306697.1| hypothetical protein Tmel_1465 [Thermosipho melanesiensis BI429] gi|149793864|gb|ABR31312.1| protein of unknown function DUF88 [Thermosipho melanesiensis BI429] Length = 188 Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 27/176 (15%), Positives = 63/176 (35%), Gaps = 15/176 (8%) Query: 7 KIALFIDGANLYASS-----KALGFDIDYRKLLKAFRS----RAIVIRAYYYTTVVGDPE 57 + + +DG LY S KA +D ++ ++K + +IR ++ + + Sbjct: 2 RAIIIVDGNYLYKSCMNEWKKAPKYDFCFQNIIKFYSKVINTEMHLIRVRFHDSPPCEGG 61 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLV 117 Q V G + +DV +A+D + ++ ++ Sbjct: 62 DNNFRTKKEKVLNKLRSIQ-RIDVVLGRCRKIGNTFSQKGVDVNMALDIVRYANDIDTII 120 Query: 118 IFSGDGCFTTLVAALQRKVKK-VTIVSTVLSDPSMASDQ----LRRQADYFMDLAY 168 I SGD + + + V ++S + + ++D+ L +D++ Sbjct: 121 IISGDSDLVPAFDEARNRGAEIVLLLSPHHFNSTGSADESIKKLIVASDFYFTFDD 176 >gi|269124499|ref|YP_003297869.1| hypothetical protein Tcur_0226 [Thermomonospora curvata DSM 43183] gi|268309457|gb|ACY95831.1| protein of unknown function DUF88 [Thermomonospora curvata DSM 43183] Length = 446 Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 30/187 (16%), Positives = 61/187 (32%), Gaps = 31/187 (16%) Query: 5 REKIALFIDGANL-------YASSK-ALGFDIDYRKLLKAFRSRAI------VIRAYYYT 50 ++ ALF+D L ++ D+ LL+ + ++R Y+Y Sbjct: 1 MDRCALFVDAGYLLADGAMAVHGTRHREAVSWDFAGLLQLLSNLGRERTGLPLLRCYWYE 60 Query: 51 TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110 V + + R + +D E+ D + Sbjct: 61 ATVEGRRSPEHEA-------------LADLPGLKLRLGRIRPGRREGVDAEIQRDLMTLA 107 Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL-- 166 + V+ GD +VA Q +VT+V + S LR++ D +++ Sbjct: 108 RNRAIADAVLVGGDEDMAPVVAEAQEFGVRVTVVHVAVDGNWTISRVLRQECDDLIEIGA 167 Query: 167 AYLKNEI 173 +L+ + Sbjct: 168 GHLRPYV 174 >gi|254388917|ref|ZP_05004148.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC 27064] gi|197702635|gb|EDY48447.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC 27064] Length = 334 Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 62/187 (33%), Gaps = 31/187 (16%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53 A+F+D +YA++ L FD+D +++AF +A ++R Y+Y Sbjct: 70 AIFVDAGYVYAAAGLLVAGTEDRRAFDLDAEGMIEAFIDKARTIFADSRLLRVYWYDGAR 129 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 L K N + +D + D + Sbjct: 130 RRIHTPEQQSIAELP------------DVKVRLGNLNANNQQKGVDSLIRSDLESLARHR 177 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169 + + GD + V A Q +V + +D S ++ L + D DL + Sbjct: 178 AISDAALVGGDEDLVSAVEAAQGYGARVHLWGIEAADGSNQAEPLLWEVDSQRTFDLDFC 237 Query: 170 KNEIARD 176 + I R Sbjct: 238 RPYITRR 244 >gi|330955890|gb|EGH56150.1| hypothetical protein PSYCIT7_32171 [Pseudomonas syringae Cit 7] Length = 82 Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 34/86 (39%), Gaps = 6/86 (6%) Query: 5 REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +KIA+F D NLY + + A G +Y L R ++ A+ Y GD S Sbjct: 1 MKKIAVFADVQNLYYTVRQAHGCHFNYAALWADISKRGEIVHAFAYAIDRGD-----SKQ 55 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENC 89 L GF V K + ++ Sbjct: 56 QQFQQILRNLGFTVRLKPYIQRSDGS 81 >gi|212224115|ref|YP_002307351.1| hypothetical protein TON_0966 [Thermococcus onnurineus NA1] gi|212009072|gb|ACJ16454.1| hypothetical protein, conserved [Thermococcus onnurineus NA1] Length = 170 Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 57/163 (34%), Gaps = 32/163 (19%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 +KIAL IDG N+ F + ++ + A Sbjct: 31 KKIALLIDGPNI----LRKEFGVKLEDIVDVLEDIGDLRVAKVILNQYAP--------QG 78 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDG 123 L++ + GF+VV V V+LAV+A + ++ + + + + Sbjct: 79 LIEAVSNQGFEVVV--------------VSGETGVKLAVEAMREIYNPNIDVIALATRNA 124 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 F ++ + K K+ ++ S L+ ADY + L Sbjct: 125 EFLPVILKAKEKGKETIVIGIEPGF----SAALKHAADYTIIL 163 >gi|297202206|ref|ZP_06919603.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] gi|297148057|gb|EDY57683.2| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] Length = 300 Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 61/187 (32%), Gaps = 31/187 (16%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53 A+F+D LYA++ L FD+D L++A RA ++R Y+Y Sbjct: 37 AIFVDAGYLYAAAGRLVAGTEDRRAFDLDAEGLIEALIDRARTIFADSRLLRVYWYDGAR 96 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 L K N + +D + D + Sbjct: 97 RRIHTTEQQSIAELP------------DVKVRLGNLNANNQQKGVDSLIRSDLESLARHR 144 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169 + + GD + V A Q +V + + ++ L + D +DL + Sbjct: 145 AISDAALLGGDEDLVSAVEAAQGYGARVHLWGIEAPEGRNQAEPLLWEVDSQRTLDLDFF 204 Query: 170 KNEIARD 176 K ++R Sbjct: 205 KPYVSRR 211 >gi|254173531|ref|ZP_04880203.1| conserved hypothetical protein TIGR00288 [Thermococcus sp. AM4] gi|214032223|gb|EEB73053.1| conserved hypothetical protein TIGR00288 [Thermococcus sp. AM4] Length = 165 Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 58/165 (35%), Gaps = 32/165 (19%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 P+++I L IDG N+ F I +++A V A Sbjct: 17 EQPKKRIGLIIDGPNI----LRKEFGIKLEDIIEALNRIGSVRIAKVILNQYAP------ 66 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIF 119 L++ + G + V V DV +A++ E + ++ + + Sbjct: 67 --QGLVEAIVNQGLEPVI--------------VAGDTDVRVAIETMEMIYTADVDVIALA 110 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 S D F L+ +R+ K+ ++ S L+ ADY + Sbjct: 111 SRDADFLPLIIEAKRRGKETVVIGVEPGF----SVALQNAADYVI 151 >gi|294814854|ref|ZP_06773497.1| DUF88 domain-containing protein [Streptomyces clavuligerus ATCC 27064] gi|294327453|gb|EFG09096.1| DUF88 domain-containing protein [Streptomyces clavuligerus ATCC 27064] Length = 322 Score = 72.7 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 62/187 (33%), Gaps = 31/187 (16%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53 A+F+D +YA++ L FD+D +++AF +A ++R Y+Y Sbjct: 58 AIFVDAGYVYAAAGLLVAGTEDRRAFDLDAEGMIEAFIDKARTIFADSRLLRVYWYDGAR 117 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 L K N + +D + D + Sbjct: 118 RRIHTPEQQSIAELP------------DVKVRLGNLNANNQQKGVDSLIRSDLESLARHR 165 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169 + + GD + V A Q +V + +D S ++ L + D DL + Sbjct: 166 AISDAALVGGDEDLVSAVEAAQGYGARVHLWGIEAADGSNQAEPLLWEVDSQRTFDLDFC 225 Query: 170 KNEIARD 176 + I R Sbjct: 226 RPYITRR 232 >gi|260579645|ref|ZP_05847514.1| conserved hypothetical protein [Corynebacterium jeikeium ATCC 43734] gi|258602286|gb|EEW15594.1| conserved hypothetical protein [Corynebacterium jeikeium ATCC 43734] Length = 455 Score = 72.4 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 64/181 (35%), Gaps = 27/181 (14%) Query: 6 EKIALFIDGANL---YASSKALGF----DIDYRKLLKAFRS------RAIVIRAYYYTTV 52 E+ +++D + L + +S G +ID +++ + V R ++Y + Sbjct: 3 ERTQVYVDTSYLLASFYNSWDTGARAQLEIDLPEVVAVLGQMIQDQLKQPVHRQFWYDGI 62 Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS-- 110 ++ G Q+ A E+ G +R + ++D L D + Sbjct: 63 PDSGPHRYQRSL-----RSEPGVQLRAGQLIEW----GDRRTQKAVDTRLVADIVIAAMK 113 Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 + +V+ SGD V +V + SM+S LR D L + Sbjct: 114 RQVSDIVLVSGDADMLPGVEEAVAAGIRVHLYGF--GWDSMSS-ALRFACDTTTILDPRE 170 Query: 171 N 171 + Sbjct: 171 D 171 >gi|68535150|ref|YP_249855.1| hypothetical protein jk0087 [Corynebacterium jeikeium K411] gi|68262749|emb|CAI36237.1| hypothetical protein jk0087 [Corynebacterium jeikeium K411] Length = 451 Score = 72.4 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 64/181 (35%), Gaps = 27/181 (14%) Query: 6 EKIALFIDGANL---YASSKALGF----DIDYRKLLKAFRS------RAIVIRAYYYTTV 52 E+ +++D + L + +S G +ID +++ + V R ++Y + Sbjct: 3 ERTQVYVDTSYLLASFYNSWDTGARAQLEIDLPEVVAVLGQMIQDQLKQPVHRQFWYDGI 62 Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS-- 110 ++ G Q+ A E+ G +R + ++D L D + Sbjct: 63 PDSGPHRYQRSL-----RSEPGVQLRAGQLIEW----GDRRTQKAVDTRLVADIVIAAMK 113 Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 + +V+ SGD V +V + SM+S LR D L + Sbjct: 114 RQVSDIVLVSGDADMLPGVEEAVAAGIRVHLYGF--GWDSMSS-ALRFACDTTTILDPRE 170 Query: 171 N 171 + Sbjct: 171 D 171 >gi|240103393|ref|YP_002959702.1| hypothetical protein TGAM_1336 [Thermococcus gammatolerans EJ3] gi|239910947|gb|ACS33838.1| Conserved hypothetical protein [Thermococcus gammatolerans EJ3] Length = 169 Score = 72.4 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 63/169 (37%), Gaps = 32/169 (18%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 ++IAL IDG N+ K LG + L++ + A Sbjct: 30 KRIALLIDGPNMLR--KELG--VKLEDLVEVLSEIGDIRVAKVVLNQYAP--------QG 77 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDG 123 L++ + GF+ + V V+LAV+A + + ++ + I + + Sbjct: 78 LIEAVSNQGFEPMV--------------VSGETGVKLAVEAMKEIYNPHIDVIAIATRNA 123 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 F ++ + K K+ ++ S L+ ADY + L K+E Sbjct: 124 EFLPVILKAKEKGKETIVIGVEPGF----SVALKHAADYAIVLGGEKDE 168 >gi|34496201|ref|NP_900416.1| hypothetical protein CV_0746 [Chromobacterium violaceum ATCC 12472] gi|34102055|gb|AAQ58422.1| hypothetical protein CV_0746 [Chromobacterium violaceum ATCC 12472] Length = 180 Score = 72.4 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 31/193 (16%), Positives = 63/193 (32%), Gaps = 48/193 (24%) Query: 10 LFIDGANLYASSKA----------------------LGFDIDYRKLLKAFRSRA--IVIR 45 ++ID +NLY + G+ I + KL + + R Sbjct: 5 IYIDNSNLYIEGRRVSAVQQRLATNINEAMRDGILDHGYTISFGKLHEFLTGGDLTKIKR 64 Query: 46 AYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAV- 104 A Y + + + GF++ E+ + +D +A Sbjct: 65 AALYGSRPPPNDSIWKSA-------ERAGFELHL-------EDRNVANKEKKIDTGIATL 110 Query: 105 ---DAFEQS-EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160 DA++ + V+ +GD + + L+ +V +V S A+ +L+ A Sbjct: 111 LTKDAYKHGKPEEDLFVLVAGDKDYVPTLNELRADGYQVEVV-----FWSHAAKELKDAA 165 Query: 161 DYFMDLAYLKNEI 173 F+ L + Sbjct: 166 TRFISLDQHLEHL 178 >gi|121604991|ref|YP_982320.1| hypothetical protein Pnap_2090 [Polaromonas naphthalenivorans CJ2] gi|120593960|gb|ABM37399.1| conserved hypothetical protein [Polaromonas naphthalenivorans CJ2] Length = 268 Score = 72.4 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 26/188 (13%), Positives = 55/188 (29%), Gaps = 38/188 (20%) Query: 3 DPREKIALFIDGANLYASSKALGFD----------------IDYRKLLKAFRSRAIVIRA 46 + + +AL+ D NL+AS + ID + +++ S + Sbjct: 7 ESQPSVALYWDFENLHASLCEARQEGAYSKQDNRFRVQEPLIDIQAVVELAASFGPIAIN 66 Query: 47 YYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA 106 Y + D L +++ K+ D++L +DA Sbjct: 67 RAYCN--------WQYFSRYRDALLQCAVELIQL-------FPPGGSAKNGADIKLCLDA 111 Query: 107 FEQSE---GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163 E + ++I GD F + ++ + + + S + F Sbjct: 112 MEDMGRFGHIGTIIIVGGDSDFMPVSQKVKAAGRSLIGIGARKSTNRHWAKS----CHEF 167 Query: 164 MDLAYLKN 171 L Sbjct: 168 RYYENLVE 175 >gi|315231506|ref|YP_004071942.1| hypothetical protein TERMP_01744 [Thermococcus barophilus MP] gi|315184534|gb|ADT84719.1| hypothetical protein TERMP_01744 [Thermococcus barophilus MP] Length = 175 Score = 72.4 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 56/162 (34%), Gaps = 32/162 (19%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 I L IDG N+ F I + +A + A L+ Sbjct: 27 IGLIIDGPNI----LRKEFGIRLEDIKEALERIGKIRVAKVVLNQYAP--------QGLI 74 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCF 125 + + GF+ + V DV +A++A E ++ + I + D F Sbjct: 75 EAVVNQGFEPII--------------VAGDTDVRIAIEAMELIYNSDVDIIAIATRDADF 120 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 +++ +RK K+ ++ S L+ ADY + + Sbjct: 121 LPIISEAKRKGKETIVIGVEPGF----SVALQNAADYVIKME 158 >gi|302558564|ref|ZP_07310906.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000] gi|302476182|gb|EFL39275.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000] Length = 305 Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 60/187 (32%), Gaps = 31/187 (16%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53 A+F+D LYA++ L FD+D L+ A RA ++R Y+Y Sbjct: 42 AIFVDAGYLYAAAGRLVTGTEDRRAFDLDAEGLIDALIDRARTVFADSRLLRVYWYDGAR 101 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 L K N + +D + D + Sbjct: 102 RRIHTAEQQTIAELP------------DVKVRLGNLNANNQQKGVDSLIRSDLESLARHR 149 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169 + + GD + V A Q +V + + ++ L + D +DL + Sbjct: 150 AISDAALLGGDEDLVSAVEAAQGYGARVHLWGIEAPEGRNQAEPLLWEVDSQRTLDLDFF 209 Query: 170 KNEIARD 176 K ++R Sbjct: 210 KPYVSRR 216 >gi|212224114|ref|YP_002307350.1| hypothetical protein TON_0965 [Thermococcus onnurineus NA1] gi|212009071|gb|ACJ16453.1| hypothetical protein, conserved [Thermococcus onnurineus NA1] Length = 170 Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 28/162 (17%), Positives = 54/162 (33%), Gaps = 32/162 (19%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 I L IDG N+ F I +++A + A L+ Sbjct: 29 IGLIIDGPNI----LRKEFGIKLEDIVEALERIGKIRVAKVVLNQYAP--------QGLI 76 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEH--LVIFSGDGCF 125 + + G + + V DV +A++A E + + + + D F Sbjct: 77 EAVVNQGLEPII--------------VAGDTDVRIAIEAMELIYNSDVEVIALATRDADF 122 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 ++ +RK K+ ++ S L+ ADY + + Sbjct: 123 LPIINEAKRKGKETIVIGVEPGF----SVALQNAADYVIKME 160 >gi|242398824|ref|YP_002994248.1| hypothetical protein TSIB_0838 [Thermococcus sibiricus MM 739] gi|242265217|gb|ACS89899.1| hypothetical protein TSIB_0838 [Thermococcus sibiricus MM 739] Length = 187 Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 66/182 (36%), Gaps = 35/182 (19%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 +KIAL IDG N+ F++ ++ A + A Sbjct: 34 KKIALLIDGPNI----LRKEFNVHLEDIVAALEELGNIRVAKVVLNQYAP--------QG 81 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDG 123 L++ + GF+ + V V+LAV+A ++ ++ + + + + Sbjct: 82 LIEAIANQGFEPII--------------VAGETGVKLAVEAMREIYNQNIDIIALATRNA 127 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL---AYLKNEIARDPDED 180 F ++ + K K+ I+ S L+ ADY + L + I +D + Sbjct: 128 EFLPIILKAKEKGKETAIIGIEPGF----SAALKHAADYVIALERGEDNEEIIIQDTKKR 183 Query: 181 KK 182 +K Sbjct: 184 RK 185 >gi|302521778|ref|ZP_07274120.1| conserved hypothetical protein [Streptomyces sp. SPB78] gi|318062102|ref|ZP_07980823.1| hypothetical protein SSA3_29472 [Streptomyces sp. SA3_actG] gi|302430673|gb|EFL02489.1| conserved hypothetical protein [Streptomyces sp. SPB78] Length = 310 Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 40/194 (20%), Positives = 63/194 (32%), Gaps = 44/194 (22%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRS-------RAIVIRAYYYTTVV 53 A+F+D LYA++ L GF++D + L+ A + ++R Y+Y Sbjct: 33 AIFVDAGYLYAAAGRLVTGTEDRKGFELDAQGLIDALVDCASHVFPHSRLLRVYWYDGAR 92 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 L K N + +D + D + Sbjct: 93 RRIHTAEQQSIAELP------------DVKVRLGNLNANNQQKGVDSLIRGDLESLARHR 140 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD---------Y 162 + V+ GD V A Q +V + A + LR QAD Sbjct: 141 AIGDAVLLGGDEDLVPAVEAAQDFGARVHLWGIE------APEGLRNQADPLLWEVDTQR 194 Query: 163 FMDLAYLKNEIARD 176 +DLA+LK AR Sbjct: 195 TLDLAFLKPYAARR 208 >gi|329939623|ref|ZP_08288924.1| hypothetical protein SGM_4416 [Streptomyces griseoaurantiacus M045] gi|329301193|gb|EGG45088.1| hypothetical protein SGM_4416 [Streptomyces griseoaurantiacus M045] Length = 302 Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 33/187 (17%), Positives = 61/187 (32%), Gaps = 31/187 (16%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53 A+F+D LYA++ L FD+D L++A +A ++R Y+Y Sbjct: 38 AIFVDAGYLYAAAGRLVAGTEDRRAFDVDAEGLIEALIDKARTIFADSRLLRVYWYDGAR 97 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 L K N + +D + D + Sbjct: 98 RRIHTAEQQSIAELP------------DVKVRLGNLNANNQQKGVDSLIRSDLESLARHR 145 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169 + + GD + V A Q +V + + ++ L + D +DL + Sbjct: 146 AISDAALLGGDEDLVSAVEAAQGYGARVHLWGIEAPEGRNQAEPLLWEVDSQRTLDLDFF 205 Query: 170 KNEIARD 176 K ++R Sbjct: 206 KPYVSRR 212 >gi|326317506|ref|YP_004235178.1| hypothetical protein Acav_2702 [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374342|gb|ADX46611.1| Domain of unknown function DUF88 [Acidovorax avenae subsp. avenae ATCC 19860] Length = 179 Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 70/185 (37%), Gaps = 20/185 (10%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRS--RAIVIRAYYYTTVVGDPEQQFSP 62 + + + +DGA L+ K+ DY KL + +YY +V + Sbjct: 1 MKTVWI-VDGAYLFNYGKS--RPFDYLKLKNEITRLNGGPIRESYYLNSVSDPATDAQNA 57 Query: 63 LHPLLDWLHYNG--FQVVAKVAKEF------TENCGRKRVKSSMDVELAVDAFEQSEG-- 112 H + +G F+V K + + V+ +DV +A + + Sbjct: 58 FHSWIKTAPPHGPKFRVQLYKLKRMHMSCAACGHSSDRWVQKGVDVGIATLIIKLAAQNV 117 Query: 113 LEHLVIFSGDGCFTTLVAALQ-RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 + L++ +GDG F ++ ++ K+V + + S S L+ +D + + + Sbjct: 118 YDRLILSAGDGDFEDAISYVKSELHKEVWVSGSAASL----SPDLQSYSDNVLWMEDMSP 173 Query: 172 EIARD 176 I R Sbjct: 174 TIDRT 178 >gi|326381644|ref|ZP_08203338.1| hypothetical protein SCNU_01805 [Gordonia neofelifaecis NRRL B-59395] gi|326199891|gb|EGD57071.1| hypothetical protein SCNU_01805 [Gordonia neofelifaecis NRRL B-59395] Length = 355 Score = 72.4 bits (176), Expect = 3e-11, Method: Composition-based stats. Identities = 34/200 (17%), Positives = 61/200 (30%), Gaps = 35/200 (17%) Query: 5 REKIALFIDGANLYASS--------KALGFDIDYRKLLKAFRSRAI------VIRAYYYT 50 R +L+ID L AS+ G +++Y +L+ A +R ++Y Sbjct: 33 RPTCSLYIDTGYLLASAATRVTGTSLRNGINVEYSRLIDTLIETAEKLSGLPTLRVHWYD 92 Query: 51 TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110 + L K G + +D+ + +D + Sbjct: 93 SADNGVPNPLQQRIGELA------------KVKLRLGRFGVNGEQKGVDLRIGLDLVAHA 140 Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVS--TVLSDPSMASDQLRRQADYFMDL 166 + + SGD T V Q +V +++ T S L R AD + Sbjct: 141 RNNTSDVFFLVSGDDDLTEAVEEAQVHGVQVILLAVPTADGKSHGVSRHLIRAADDLHRI 200 Query: 167 AYLK-----NEIARDPDEDK 181 L ++ R P Sbjct: 201 DGLALDESILKVERQPAPKP 220 >gi|330508315|ref|YP_004384743.1| hypothetical protein MCON_2481 [Methanosaeta concilii GP-6] gi|328929123|gb|AEB68925.1| conserved hypothetical protein TIGR00288 [Methanosaeta concilii GP-6] Length = 161 Score = 72.0 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 54/166 (32%), Gaps = 32/166 (19%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 R++I L +DG N+ F +D ++ + + + Sbjct: 20 RKRIGLLVDGPNM----LRKEFQMDLEEIRDILKDYGDIKMGKVFLN--------QYASE 67 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGD 122 L++ + GF+ V S +DV +AV+ + ++ L + + D Sbjct: 68 KLVEAVENQGFEPVICT--------------SDVDVRMAVEGVDMIYNPVIDTLALVTRD 113 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 ++ K+ I S LR ADY + L Sbjct: 114 ADLKPVLMKAMEHGKETIIFGAEPGF----SVALRNSADYVIVLRD 155 >gi|327401247|ref|YP_004342086.1| hypothetical protein Arcve_1367 [Archaeoglobus veneficus SNP6] gi|327316755|gb|AEA47371.1| protein of unknown function DUF88 [Archaeoglobus veneficus SNP6] Length = 186 Score = 72.0 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 26/166 (15%), Positives = 58/166 (34%), Gaps = 32/166 (19%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 R K+ + +DG N+ F+I+ +++ + + A + Sbjct: 26 RRKVGVLVDGPNM----LRKEFNINLQEIREILSEYGDIKAAKVFLN--------QYASE 73 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGD 122 L++ + GF+ + +DV +AV+A E ++ + + + D Sbjct: 74 KLVEAIENQGFEPIV--------------TSGDVDVRMAVEAMEMIYNDAIDAIALVTRD 119 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F +++ K+ I+ S L+ AD + L Sbjct: 120 ADFKSVLKKAMEMGKETIIIGAEPGF----SAALKNSADIAIVLNE 161 >gi|284165328|ref|YP_003403607.1| hypothetical protein Htur_2050 [Haloterrigena turkmenica DSM 5511] gi|284014983|gb|ADB60934.1| protein of unknown function DUF88 [Haloterrigena turkmenica DSM 5511] Length = 156 Score = 72.0 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 54/168 (32%), Gaps = 31/168 (18%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 + + L +DG N++ FD+D L A R V Y Sbjct: 18 ETEPTVGLLVDGPNVF----RDEFDVDLNDLRDAARDLGRVGVIRLYL--------DEHA 65 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFS 120 L+ GF+V+ +DV+LAVDA ++ L I S Sbjct: 66 TPGLIQAAEARGFEVIV--------------TSGDVDVKLAVDATALCSDGTIDRLAIGS 111 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 D F ++ + ++ SD LR AD + L Sbjct: 112 RDTDFKPVLEYAGTVGVETVAIAPGTYGR---SDALRNAADEAITLGD 156 >gi|304314246|ref|YP_003849393.1| hypothetical protein MTBMA_c04840 [Methanothermobacter marburgensis str. Marburg] gi|302587705|gb|ADL58080.1| conserved hypothetical protein [Methanothermobacter marburgensis str. Marburg] Length = 173 Score = 72.0 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 28/178 (15%), Positives = 55/178 (30%), Gaps = 35/178 (19%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 + I L +DG N+ F ++ + K + Sbjct: 23 EKNIGLLVDGPNM----LRKEFSLNLDLVRKIMSEYGNMRVGKV--------LLNQYASD 70 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGD 122 L++ + GF + V DV +AV+A E ++ + + + D Sbjct: 71 KLIEAIVNQGFTPIV--------------VAGDTDVYMAVEAMELIYNPNIDIIALMTRD 116 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180 F ++ + K ++ S L+ AD+ + LK E R + Sbjct: 117 ADFLPIINKAKENGKDTIVIGAEPGF----SAALQNSADHAI---ILKPENGRPRKGN 167 >gi|294676826|ref|YP_003577441.1| hypothetical protein RCAP_rcc01279 [Rhodobacter capsulatus SB 1003] gi|294475646|gb|ADE85034.1| conserved hypothetical protein [Rhodobacter capsulatus SB 1003] Length = 214 Score = 72.0 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 26/144 (18%), Positives = 51/144 (35%), Gaps = 20/144 (13%) Query: 1 MFDPRE------KIALFIDGANLYASSKALG----FDIDYRKLLKAFRSR--AIVIRAYY 48 M + + + AL+IDG NLY + LG + Y +L + + ++R Y Sbjct: 1 MSEKDQQETRAARAALYIDGFNLYHAIDRLGQPHLKWLSYWRLGQVILPQKTQKLVRVVY 60 Query: 49 YTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKE---FTENCGRKRVK---SSMDVEL 102 T + ++ G +V +CG + K + D+ L Sbjct: 61 CTAFYPGSAGKRWRHEQVIAAQRAEGVEVALGHYVHERMMCRSCGDRWEKPTEKAGDINL 120 Query: 103 AVDAFEQS--EGLEHLVIFSGDGC 124 A+ + + +H + + D Sbjct: 121 AIHLMHDAFEDVFDHAYLLTADSD 144 >gi|294631254|ref|ZP_06709814.1| conserved hypothetical protein [Streptomyces sp. e14] gi|292834587|gb|EFF92936.1| conserved hypothetical protein [Streptomyces sp. e14] Length = 305 Score = 72.0 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 60/187 (32%), Gaps = 31/187 (16%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53 A+F+D LYA++ L FD+D L+ A RA ++R Y+Y Sbjct: 41 AIFVDAGYLYAAAGRLVAGTEDRRAFDLDAEGLIDALIDRARTVFADSRLLRVYWYDGAR 100 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 L K N + +D + D + Sbjct: 101 RRIHTAEQQSIAELP------------DVKVRLGNLNANNQQKGVDSLIRSDLESLARHR 148 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169 + + GD + V A Q +V + + ++ L + D +DL + Sbjct: 149 AISDAALLGGDEDLVSAVEAAQGYGARVHLWGIEAPEGRNQAEPLLWEVDSQRTLDLDFF 208 Query: 170 KNEIARD 176 K ++R Sbjct: 209 KPYVSRR 215 >gi|57640690|ref|YP_183168.1| hypothetical protein TK0755 [Thermococcus kodakarensis KOD1] gi|57159014|dbj|BAD84944.1| hypothetical protein, conserved, DUF88 family [Thermococcus kodakarensis KOD1] Length = 165 Score = 72.0 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 60/163 (36%), Gaps = 32/163 (19%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 ++IAL IDG N+ K LG + + +A + A Sbjct: 30 KRIALLIDGPNILR--KELG--VKLEDIAEALSEIGDIRVAKVILNQYAP--------QG 77 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDG 123 L++ + GF+ + V V+LAV+A + + ++ + + + + Sbjct: 78 LIEAVSNQGFEPII--------------VSGETGVKLAVEAMKEIYNPHIDVIALATRNA 123 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 F ++ + K K+ ++ S L+ ADY + L Sbjct: 124 EFLPVILKAKEKGKETVVIGVEPGF----SVALKHAADYTIIL 162 >gi|315231507|ref|YP_004071943.1| hypothetical protein TERMP_01745 [Thermococcus barophilus MP] gi|315184535|gb|ADT84720.1| hypothetical protein TERMP_01745 [Thermococcus barophilus MP] Length = 185 Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 34/192 (17%), Positives = 65/192 (33%), Gaps = 40/192 (20%) Query: 1 MFDPR---EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M +KIAL IDG N+ F+I +++A + A Sbjct: 22 MKRKMRRGKKIALLIDGPNI----LRKEFNIHLEDIVEALEQLGNIRVAKVILNQYAP-- 75 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEH 115 L++ + GF+ + V+LAV+A + ++ Sbjct: 76 ------QGLIEAVANQGFEPIIVP--------------GETGVKLAVEAMREIYNPNIDI 115 Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA- 174 + + + + F ++ + K K+ I+ S L+ ADY + L E Sbjct: 116 IALATRNAEFLPIILKAKEKGKETVIIGVEPGF----SAALKHGADYVIVLTPRGEESGE 171 Query: 175 ----RDPDEDKK 182 ++ E +K Sbjct: 172 RKDIQNSKERRK 183 >gi|14590028|ref|NP_142092.1| hypothetical protein PH0074 [Pyrococcus horikoshii OT3] gi|3256460|dbj|BAA29143.1| 163aa long hypothetical protein [Pyrococcus horikoshii OT3] Length = 163 Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 57/166 (34%), Gaps = 32/166 (19%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 I L IDG N+ F I + KA + A L+ Sbjct: 24 IGLIIDGPNI----LRKEFGIKLEDIKKALEKIGKIRVAKVVLNQYAP--------QGLI 71 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCF 125 + + GF+ + V DV +A++A E ++ + + + D F Sbjct: 72 EAVVNQGFEPII--------------VAGDTDVRVAIEAMELIYNTDVDVIALATRDADF 117 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 L++ +RK K+ ++ S L+ ADY + + K Sbjct: 118 LPLISEAKRKGKETVVIGVEPGF----SVALQNAADYIIKMEKKKE 159 >gi|326443231|ref|ZP_08217965.1| hypothetical protein SclaA2_19298 [Streptomyces clavuligerus ATCC 27064] Length = 303 Score = 72.0 bits (175), Expect = 4e-11, Method: Composition-based stats. Identities = 34/187 (18%), Positives = 62/187 (33%), Gaps = 31/187 (16%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53 A+F+D +YA++ L FD+D +++AF +A ++R Y+Y Sbjct: 39 AIFVDAGYVYAAAGLLVAGTEDRRAFDLDAEGMIEAFIDKARTIFADSRLLRVYWYDGAR 98 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 L K N + +D + D + Sbjct: 99 RRIHTPEQQSIAELP------------DVKVRLGNLNANNQQKGVDSLIRSDLESLARHR 146 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169 + + GD + V A Q +V + +D S ++ L + D DL + Sbjct: 147 AISDAALVGGDEDLVSAVEAAQGYGARVHLWGIEAADGSNQAEPLLWEVDSQRTFDLDFC 206 Query: 170 KNEIARD 176 + I R Sbjct: 207 RPYITRR 213 >gi|120611183|ref|YP_970861.1| hypothetical protein Aave_2514 [Acidovorax citrulli AAC00-1] gi|120589647|gb|ABM33087.1| protein of unknown function DUF88 [Acidovorax citrulli AAC00-1] Length = 179 Score = 71.6 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 71/184 (38%), Gaps = 20/184 (10%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRS--RAIVIRAYYYTTVVGDPEQQFSP 62 + + + IDGA L+ K+ DY KL + +YY +V + Sbjct: 1 MKTVWI-IDGAYLFNYGKS--KPFDYLKLKNEITRLNGGPIRESYYLNSVSDPATDAQNA 57 Query: 63 LHPLLDWLHYNG--FQVVAKVAKEF------TENCGRKRVKSSMDVELAVDAFEQSEG-- 112 H + +G F+V K+ + + V+ +DV +A + + Sbjct: 58 FHSWIKTAPPHGPKFRVQLYKLKKMHMNCAACGHSSDRWVQKGVDVGIATLIIKLAAQNV 117 Query: 113 LEHLVIFSGDGCFTTLVAALQ-RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171 + L++ +GDG F ++ ++ K+V + + S S L+ +D + + + Sbjct: 118 YDRLILSAGDGDFEDAISYVKSELHKEVWVSGSAASL----SPDLQSYSDNVLWMEDMSP 173 Query: 172 EIAR 175 I R Sbjct: 174 TIDR 177 >gi|156602934|ref|XP_001618742.1| hypothetical protein NEMVEDRAFT_v1g224852 [Nematostella vectensis] gi|156200154|gb|EDO26642.1| predicted protein [Nematostella vectensis] Length = 343 Score = 71.6 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 21/148 (14%), Positives = 46/148 (31%), Gaps = 24/148 (16%) Query: 34 LKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKR 93 + + ++ D + + ++D H G + +K+ Sbjct: 132 IHEALENGELDILIGTHALLEDKVKFRNLGFAIIDEQHRFGVEQRSKL-----------W 180 Query: 94 VKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMAS 153 K +MD+ S + + S D FT L L+ +V + + Sbjct: 181 KKDAMDIL-------YSGKVTGFCLVSSDSDFTRLATRLREAGMEVIGIGEKKTPHP--- 230 Query: 154 DQLRRQADYFMDLAYLKNE-IARDPDED 180 D F+ + LK E + ++ + Sbjct: 231 --FIVACDKFIYIEILKKETVEKNDQKQ 256 >gi|318080774|ref|ZP_07988106.1| hypothetical protein SSA3_29788 [Streptomyces sp. SA3_actF] Length = 302 Score = 71.6 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 37/188 (19%), Positives = 61/188 (32%), Gaps = 32/188 (17%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRS-------RAIVIRAYYYTTVV 53 A+F+D LYA++ L GF++D + L+ A + ++R Y+Y Sbjct: 33 AIFVDAGYLYAAAGRLVTGTEDRKGFELDAQGLIDALVDCASHVFPHSRLLRVYWYDGAR 92 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 L K N + +D + D + Sbjct: 93 RRIHTAEQQSIAELP------------DVKVRLGNLNANNQQKGVDSLIRGDLESLARHR 140 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVS-TVLSDPSMASDQLRRQAD--YFMDLAY 168 + V+ GD V A Q +V + +D L + D +DLA+ Sbjct: 141 AIGDAVLLGGDEDLVPAVEAAQDFGARVHLWGIEAPEGLRNQADPLLWEVDTQRTLDLAF 200 Query: 169 LKNEIARD 176 LK AR Sbjct: 201 LKPYAARR 208 >gi|290957576|ref|YP_003488758.1| hypothetical protein SCAB_30991 [Streptomyces scabiei 87.22] gi|260647102|emb|CBG70201.1| conserved hypothetical protein [Streptomyces scabiei 87.22] Length = 301 Score = 71.6 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 33/187 (17%), Positives = 58/187 (31%), Gaps = 31/187 (16%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53 A+F+D LYA+ L FD+D L+ A +A ++R Y+Y Sbjct: 37 AIFVDAGYLYAAVGRLAAGTEDRRSFDLDAEGLIDALIDKARTIFADSRLLRVYWYDGAR 96 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 L K N + +D + D + Sbjct: 97 RRIHTAEQQSIAELP------------DVKVRLGNLNANNQQKGVDSLIRTDLESLARHR 144 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169 + + GD + V A Q +V + + ++ L + D DL + Sbjct: 145 AISDAALIGGDEDLVSAVEAAQGYGARVHLWGIEAPEGRNQAEPLLWEVDSQRTFDLDFF 204 Query: 170 KNEIARD 176 K ++R Sbjct: 205 KPYVSRR 211 >gi|254173701|ref|ZP_04880373.1| conserved hypothetical protein TIGR00288 [Thermococcus sp. AM4] gi|214032393|gb|EEB73223.1| conserved hypothetical protein TIGR00288 [Thermococcus sp. AM4] Length = 169 Score = 71.6 bits (174), Expect = 5e-11, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 63/169 (37%), Gaps = 32/169 (18%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 ++IAL IDG N+ K LG + L++ + A Sbjct: 30 KRIALLIDGPNMLR--KELG--VKLEDLVEVLSEIGDIRVAKVVLNQYAP--------QG 77 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDG 123 L++ + GF+ + V V+LAV+A + + ++ + I + + Sbjct: 78 LIEAVSNQGFEPMI--------------VSGETGVKLAVEAMKEIYNPHIDVIAIATRNA 123 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 F ++ + K K+ ++ S L+ ADY + L ++E Sbjct: 124 EFLPVILKAKEKGKETVVIGVEPGF----SVALKHAADYAIVLGGEEDE 168 >gi|187940199|gb|ACD39327.1| hypothetical protein PACL_0668 [Pseudomonas aeruginosa] Length = 274 Score = 71.2 bits (173), Expect = 6e-11, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 51/161 (31%), Gaps = 30/161 (18%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 ++A+ +D N+ L+ V+ Y + H Sbjct: 11 RVAVLVDCDNVSPDILEHA--------LRVVAQFGRVVLRRGYGN-------HATLSHRW 55 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124 + L F ++ G K++ D+ LA+DA E + + + D Sbjct: 56 QETLVRQAFT----PCLQYQYAAG----KNTSDIALALDALEALFDSRADTFCLVTSDSD 107 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165 F L L+ + V IV D LR +D F + Sbjct: 108 FAYLCRKLRERGAMVCIVGE-----PKTPDALRNSSDQFFE 143 >gi|330509013|ref|YP_004385441.1| hypothetical protein MCON_3373 [Methanosaeta concilii GP-6] gi|328929821|gb|AEB69623.1| conserved hypothetical protein [Methanosaeta concilii GP-6] Length = 184 Score = 71.2 bits (173), Expect = 7e-11, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 58/179 (32%), Gaps = 13/179 (7%) Query: 6 EKIALFIDGANLYASSKAL--GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 ++ A+FIDGA L ID + +R YYY + Sbjct: 10 DRAAVFIDGAYLTKILDVDFGKPKIDLARFSDILCGNYERLRTYYYNCMPYQSCPSTDEE 69 Query: 64 HPLLDWLHYNGFQVVAKVAKE----FTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLV 117 + + + E G + V+ +D+ LA D S + V Sbjct: 70 SRRFASMDKFVYTLRKLPRFEVKLGRLGRVGGEFVQKRVDIALAADLVRLSCGRMIGKAV 129 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA-YLKNEIAR 175 I +GD F + A + VT+ S D+L D + L + +AR Sbjct: 130 IVTGDSDFLPAIEAAKDAGVLVTLFY----SESSIHDELLSAVDERTPIDQDLIDLVAR 184 >gi|110668763|ref|YP_658574.1| hypothetical protein HQ2865A [Haloquadratum walsbyi DSM 16790] gi|109626510|emb|CAJ52972.1| conserved hypothetical protein [Haloquadratum walsbyi DSM 16790] Length = 219 Score = 70.8 bits (172), Expect = 7e-11, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 61/181 (33%), Gaps = 33/181 (18%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + LF+DG N+ FD+D + A Y Sbjct: 9 EQSNRSVGLFVDGPNV----LREEFDVDLDDVRTAAEQFGRPAIRRLYL--------DEH 56 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIF 119 L+ GF+V+ + +DV L+VD + + + + + I Sbjct: 57 APSGLIQAAESRGFEVIV--------------TSTDVDVRLSVDLTKAAVTDTADIIAIV 102 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 S D F + A ++ +++ ++ SD LR AD + L + ++ + Sbjct: 103 SRDADFKPAIEAANSHDRRTVVIAPGVNGR---SDALRNAADTQITLGE--DNQEKNQSK 157 Query: 180 D 180 D Sbjct: 158 D 158 >gi|187939647|gb|ACD38790.1| conserved hypothetical protein [Pseudomonas aeruginosa] gi|187939724|gb|ACD38865.1| hypothetical protein PACL_0607 [Pseudomonas aeruginosa] Length = 286 Score = 70.8 bits (172), Expect = 7e-11, Method: Composition-based stats. Identities = 24/180 (13%), Positives = 52/180 (28%), Gaps = 31/180 (17%) Query: 5 REKIALFIDGANLYASS---------KALGFDIDYRKLLKAF-------RSRAIVIRAYY 48 ++ +F+D L+A + ++ ++ ++R Y+ Sbjct: 1 MNRLGIFVDAGYLFAQGSTAIAGNPERRTNLSLNEEAVVTQLLETAADLSGGTPLLRIYW 60 Query: 49 YTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE 108 Y + + K + +D + +D E Sbjct: 61 YDAIGDRGPTLEQKRLA------------SSNNVKVRMGTLNGSGQQKGVDSMIVIDMIE 108 Query: 109 QSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTV-LSDPSMASDQLRRQADYFMD 165 + + V+ SGD V Q +V ++ D S S L ++AD + Sbjct: 109 LARNHAIADAVLLSGDEDVRVGVQFAQSYGVRVHLIGIANEHDNSHQSLSLIQEADTHTE 168 >gi|242398823|ref|YP_002994247.1| hypothetical protein TSIB_0837 [Thermococcus sibiricus MM 739] gi|242265216|gb|ACS89898.1| hypothetical protein TSIB_0837 [Thermococcus sibiricus MM 739] Length = 174 Score = 70.8 bits (172), Expect = 8e-11, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 56/171 (32%), Gaps = 32/171 (18%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 P + I L IDG N+ F I + +A + A Sbjct: 28 PPKTIGLIIDGPNI----LRKEFGIKLENIKEALEKIGNIRVAKVVLNQYAP-------- 75 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLE--HLVIFSG 121 L++ + GF+ + V DV +A++A E + + + Sbjct: 76 QGLIEAVVNQGFEPII--------------VAGDTDVRIAIEAMELIYNSDIEVIGFATR 121 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 D F ++ +RK K+ ++ S L+ ADY + + E Sbjct: 122 DADFLPIINEGKRKGKETVVIGVEPGF----SVALQNAADYVIRMEGKSEE 168 >gi|325960103|ref|YP_004291569.1| hypothetical protein Metbo_2384 [Methanobacterium sp. AL-21] gi|325331535|gb|ADZ10597.1| protein of unknown function DUF88 [Methanobacterium sp. AL-21] Length = 165 Score = 70.8 bits (172), Expect = 8e-11, Method: Composition-based stats. Identities = 28/165 (16%), Positives = 53/165 (32%), Gaps = 32/165 (19%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 + I L +DG N+ FD D + V + Sbjct: 24 KNIGLLVDGPNM----LRKEFDCDLEIVRDLMLEHGNVKVGKVFLN--------QYASDK 71 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDG 123 L++ + GF + V DV++A++AFE ++ + + + D Sbjct: 72 LIEAVVNQGFSPMI--------------VSGETDVQMAIEAFELIHNPNIDIIALMTRDV 117 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F L+ + K+ ++ S L+ AD + L Sbjct: 118 DFFPLINVAKENGKQTIVIGAEPGF----SAALKNSADDTITLKN 158 >gi|307331746|ref|ZP_07610850.1| conserved hypothetical protein [Streptomyces violaceusniger Tu 4113] gi|306882612|gb|EFN13694.1| conserved hypothetical protein [Streptomyces violaceusniger Tu 4113] Length = 305 Score = 70.8 bits (172), Expect = 8e-11, Method: Composition-based stats. Identities = 33/187 (17%), Positives = 61/187 (32%), Gaps = 31/187 (16%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53 A+F+D +YA++ L F++D L++AF +A ++R Y++ Sbjct: 37 AIFVDAGYVYAAAGRLVAGTEDRRAFELDAEGLIEAFIDKARTIFPDSRLLRVYWFDGAR 96 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 L K N + +D + D + Sbjct: 97 RRIHTPEQQSIAELP------------DVKVRLGNLNANNQQKGVDSLIRSDLESLARHR 144 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169 + V+ GD + V A Q +V + D ++ L + D DL + Sbjct: 145 AIGDAVLIGGDEDLVSAVEAAQGYGARVHLWGIEALDGRNQAEPLLWEVDSQRTFDLDFC 204 Query: 170 KNEIARD 176 K + R Sbjct: 205 KPYVTRR 211 >gi|25029366|ref|NP_739420.1| hypothetical protein CE2810 [Corynebacterium efficiens YS-314] gi|259508454|ref|ZP_05751354.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] gi|23494654|dbj|BAC19620.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] gi|259164008|gb|EEW48562.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] Length = 422 Score = 70.8 bits (172), Expect = 8e-11, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 62/181 (34%), Gaps = 27/181 (14%) Query: 6 EKIALFIDGANL---YASSKALGF----DIDYRKLLKAFRS------RAIVIRAYYYTTV 52 E+ +F+D + L + +S G +ID +++ + V R +Y + Sbjct: 3 ERTQVFVDTSYLLASFYNSWETGARAQLEIDLPEVVGVLGRMIEQQLKQPVQRQMWYDGI 62 Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS-- 110 ++ D G Q+ A E+ G +R + ++D L D Sbjct: 63 PDSGPHRYQRALRTCD-----GVQLRAGQLIEW----GERRTQKAVDTRLVADLVLAGVR 113 Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 +V+ SGD V +V + SM+S LR D L + Sbjct: 114 GQCSDIVLVSGDADMIPGVQEATNAGVRVHLYGF--GWDSMSSQ-LRHCCDTTTILDPRE 170 Query: 171 N 171 + Sbjct: 171 D 171 >gi|282895638|ref|ZP_06303763.1| Protein of unknown function DUF88 [Raphidiopsis brookii D9] gi|281199332|gb|EFA74197.1| Protein of unknown function DUF88 [Raphidiopsis brookii D9] Length = 156 Score = 70.8 bits (172), Expect = 9e-11, Method: Composition-based stats. Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 6/100 (6%) Query: 1 MFD--PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58 M D R ++A+FIDG NL+ ++ +G +IDY KLL + ++RA++YT V E+ Sbjct: 50 MSDDLNRGRVAIFIDGLNLFHAALQIGIEIDYVKLLCRLTQTSRLLRAFFYTGVDTSKEK 109 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSM 98 Q L W+ NG++VV K TEN + + + Sbjct: 110 Q----QGFLLWMRRNGYRVVTKDIIALTENGKKPKSQCGN 145 >gi|14590027|ref|NP_142091.1| hypothetical protein PH0073 [Pyrococcus horikoshii OT3] gi|3256459|dbj|BAA29142.1| 195aa long hypothetical protein [Pyrococcus horikoshii OT3] Length = 195 Score = 70.4 bits (171), Expect = 9e-11, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 67/173 (38%), Gaps = 33/173 (19%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 ++IAL +DG N+ K LG + +++A S + A Sbjct: 29 KRIALLVDGPNILR--KELGVHL--EDIVEALSSLGNIRVAKVILNQYAP--------QS 76 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDG 123 L++ + GF+ V V + V+LAV+A + ++ + + + + Sbjct: 77 LIEAVSNQGFEPVI--------------VAGEIGVKLAVEAMREVYNPNIDIIALATRNT 122 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 F ++ + K K+ I+ S L+ ADY + L + E++ + Sbjct: 123 EFVPIILKAKEKGKETAIIGVEPGF----SSALKHAADYVIVLES-RGELSEE 170 >gi|57640691|ref|YP_183169.1| hypothetical protein TK0756 [Thermococcus kodakarensis KOD1] gi|57159015|dbj|BAD84945.1| hypothetical protein, conserved, DUF88 family [Thermococcus kodakarensis KOD1] Length = 166 Score = 70.4 bits (171), Expect = 9e-11, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 61/177 (34%), Gaps = 38/177 (21%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 I L IDG N+ F I +L+A + V A L+ Sbjct: 25 IGLIIDGPNI----LRKEFGIKLEDILEALKRIGNVRVAKVILNQYAP--------QGLI 72 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCF 125 + + G + V V DV +A++A E ++ + + S D F Sbjct: 73 EAVVNQGLEPVI--------------VAGDTDVRVAIEAMELIYNSDVDVIALASRDADF 118 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182 ++ +R+ K+ ++ S L+ ADY + + R E+K+ Sbjct: 119 LPIIIEAKRRGKETVVIGVDPGF----SVALQNAADYVIKME------GRKTPENKE 165 >gi|333024585|ref|ZP_08452649.1| hypothetical protein STTU_2089 [Streptomyces sp. Tu6071] gi|332744437|gb|EGJ74878.1| hypothetical protein STTU_2089 [Streptomyces sp. Tu6071] Length = 310 Score = 70.4 bits (171), Expect = 9e-11, Method: Composition-based stats. Identities = 39/194 (20%), Positives = 62/194 (31%), Gaps = 44/194 (22%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRS-------RAIVIRAYYYTTVV 53 A+F+D LYA++ L GF++D + L+ A + ++R Y+Y Sbjct: 33 AIFVDAGYLYAAAGRLVTGTEDRKGFELDAQGLIDALVDCASHVFPHSRLLRVYWYDGAR 92 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 L K N + +D + D + Sbjct: 93 RRIHTAEQQSIAELP------------DVKVRLGNLNANNQQKGVDSLIRGDLESLARHR 140 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD---------Y 162 + V+ GD V A Q +V + A + LR QAD Sbjct: 141 AIGDAVLLGGDEDLVPAVEAAQDFGARVHLWGIE------APEGLRNQADPLLWEVDTQR 194 Query: 163 FMDLAYLKNEIARD 176 +DLA+LK R Sbjct: 195 TLDLAFLKPYAVRR 208 >gi|239817540|ref|YP_002946450.1| hypothetical protein Vapar_4578 [Variovorax paradoxus S110] gi|239804117|gb|ACS21184.1| protein of unknown function DUF88 [Variovorax paradoxus S110] Length = 527 Score = 70.4 bits (171), Expect = 9e-11, Method: Composition-based stats. Identities = 34/190 (17%), Positives = 67/190 (35%), Gaps = 27/190 (14%) Query: 7 KIALFIDGANLYASSKAL------GFDIDYRKLLKAFRSRAIVIRA-----YYYTTVVGD 55 KIALF+D N+Y+ + + F + L + A +V Sbjct: 2 KIALFVDFDNVYSGLRRISAEAAERFSRQPLRWLSWLTTGADGENIDDTSRDRRRVLVRR 61 Query: 56 PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EG 112 H GF++V K+S D+ L +D + Sbjct: 62 CYLNPVMYQKYRRPFHEAGFEIVDCPPM-------TATGKTSTDIHLVLDTMDALLDDTH 114 Query: 113 LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL-AYLKN 171 + ++FS D F+ ++ L+R ++ + + S+ + AD +D+ +L + Sbjct: 115 FDEFIVFSADADFSPVLRRLRRHDRRTVVFA-----AGAMSESYKASADRVIDIQTFLHD 169 Query: 172 EIARDPDEDK 181 + ED+ Sbjct: 170 ALELPSAEDE 179 >gi|313681102|ref|YP_004058841.1| hypothetical protein Ocepr_2220 [Oceanithermus profundus DSM 14977] gi|313153817|gb|ADR37668.1| hypothetical protein Ocepr_2220 [Oceanithermus profundus DSM 14977] Length = 242 Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 33/185 (17%), Positives = 59/185 (31%), Gaps = 26/185 (14%) Query: 2 FDPREKIALFIDGANLYASS--KALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGD---P 56 D ++ +++DG N Y + + +++ KL K + ++ Y+T V + Sbjct: 25 TDSVSRLIVYVDGFNFYYGAVKQTPYKWLNFNKLFKILFPKDDLVLVRYFTARVKNNPLN 84 Query: 57 EQQFSPLHPLLDWLH-------YNGF---QVVAKVAKEFTENCGR--KRVKSSMDVELAV 104 Q L L + GF V R K + DV LA Sbjct: 85 PGQRERQGTYLRALRTLPDFEIHEGFFLSHPVNMPVAPPGTGFARVLKFEEKGSDVNLAT 144 Query: 105 DAFEQS--EGLEHLVIFSGDGCFTTLVAALQRK-VKKVTIVST------VLSDPSMASDQ 155 + + + V+ S D + + + K V +V S Sbjct: 145 YLMLDAIEDRFDTAVVVSHDSDLALPIQIVNERLGKPVGVVGYDPRFQRKYGKRPRTSKS 204 Query: 156 LRRQA 160 LR+ A Sbjct: 205 LRKVA 209 >gi|15790568|ref|NP_280392.1| hypothetical protein VNG1608C [Halobacterium sp. NRC-1] gi|10581082|gb|AAG19872.1| conserved hypothetical protein [Halobacterium sp. NRC-1] Length = 187 Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 54/157 (34%), Gaps = 31/157 (19%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +ALF+DG N+ FD+D + + + Y PL+ Sbjct: 52 VALFVDGPNV----LRDEFDVDLDDVREIAGEVGPLAVTRLYL--------DEHATPPLI 99 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCF 125 G+ V +DV+LAVDA E +G++ L + S D F Sbjct: 100 QAGEARGYDVRV--------------TSGDVDVKLAVDATELVLDDGVDVLAVASRDTDF 145 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162 + +R+ + ++ SD LR A Sbjct: 146 KPVFEQAERRGVRTLAIAPGEHGR---SDALRNAATD 179 >gi|14520298|ref|NP_125773.1| hypothetical protein PAB0042 [Pyrococcus abyssi GE5] gi|5457513|emb|CAB49004.1| Conserved archaebacterial protein, DUF88 family [Pyrococcus abyssi GE5] Length = 191 Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 61/163 (37%), Gaps = 32/163 (19%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 ++IAL +DG N+ K LG + +++A + A Sbjct: 26 KRIALLVDGPNILR--KELGVHL--EDIVEALSDLGNIRVAKVILNQYAP--------QS 73 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDG 123 L++ + GF+ V V + V+LAV+A + ++ + + + + Sbjct: 74 LIEAVSNQGFEPVI--------------VAGEIGVKLAVEAMREVYNPNIDIIALATRNT 119 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 F ++ + K K+ I+ S L+ ADY + L Sbjct: 120 EFVPIILKAKEKGKETAIIGVEPGF----SSALKHAADYVIVL 158 >gi|145296960|ref|YP_001139781.1| hypothetical protein cgR_2860 [Corynebacterium glutamicum R] gi|140846880|dbj|BAF55879.1| hypothetical protein [Corynebacterium glutamicum R] Length = 472 Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 62/184 (33%), Gaps = 27/184 (14%) Query: 6 EKIALFIDGANL---YASSKALGF----DIDYRKLLKAFRS------RAIVIRAYYYTTV 52 E+ +F+D + L + +S G +ID +++ + V R +Y + Sbjct: 3 ERTQVFVDTSYLLASFYNSWETGARAQLEIDLPEVVGVLGRMIEQQLKQPVQRQMWYDGI 62 Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS-- 110 ++ D G Q+ A E+ G +R + ++D L D Sbjct: 63 PDSGPHRYQRALRTCD-----GVQLRAGQLIEW----GERRTQKAVDTRLVADLVLAGVR 113 Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 +V+ SGD V +V + SM+S LR D L + Sbjct: 114 GQCSDIVLVSGDADMIPGVQEAANAGLRVHLYGF--GWDSMSSQ-LRHCCDTTTILDPRE 170 Query: 171 NEIA 174 + Sbjct: 171 DFAE 174 >gi|23308996|ref|NP_602135.2| hypothetical protein NCgl2847 [Corynebacterium glutamicum ATCC 13032] gi|62391787|ref|YP_227189.1| hypothetical protein cg3263 [Corynebacterium glutamicum ATCC 13032] gi|21325721|dbj|BAC00342.1| Hypothetical protein [Corynebacterium glutamicum ATCC 13032] gi|41327129|emb|CAF20973.1| conserved hypothetical protein [Corynebacterium glutamicum ATCC 13032] Length = 472 Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 34/184 (18%), Positives = 62/184 (33%), Gaps = 27/184 (14%) Query: 6 EKIALFIDGANL---YASSKALGF----DIDYRKLLKAFRS------RAIVIRAYYYTTV 52 E+ +F+D + L + +S G +ID +++ + V R +Y + Sbjct: 3 ERTQVFVDTSYLLASFYNSWETGARAQLEIDLPEVVGVLGRMIEQQLKQPVQRQMWYDGI 62 Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS-- 110 ++ D G Q+ A E+ G +R + ++D L D Sbjct: 63 PDSGPHRYQRALRTCD-----GVQLRAGQLIEW----GERRTQKAVDTRLVADLVLAGVR 113 Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 +V+ SGD V +V + SM+S LR D L + Sbjct: 114 GQCSDIVLVSGDADMIPGVQEAANAGLRVHLYGF--GWDSMSSQ-LRHCCDTTTILDPRE 170 Query: 171 NEIA 174 + Sbjct: 171 DFAE 174 >gi|89896708|ref|YP_520195.1| hypothetical protein DSY3962 [Desulfitobacterium hafniense Y51] gi|89336156|dbj|BAE85751.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 274 Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 28/163 (17%), Positives = 55/163 (33%), Gaps = 9/163 (5%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 + IA FID N++ G+++ L+++ + A Y F Sbjct: 1 MKAIA-FIDYENIWTGLFEQGYELTPEILMESIQLYAKQND---YVLSAIYLYANFDREE 56 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ----SEGLEHLVIFS 120 + V + +++ DVEL ++A E + + + + Sbjct: 57 FWRAQTSFEKIHVYTRHVYGKNNFASTGLRRNAADVELILEAQEILLTRTATFDVFFLLT 116 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163 GDG F L+ ++ K V ++ V D+F Sbjct: 117 GDGDFLPLLRKVRAWGKDVKVIG-VKGSMHHELQAFSDSGDFF 158 >gi|149913234|ref|ZP_01901768.1| hypothetical protein RAZWK3B_04560 [Roseobacter sp. AzwK-3b] gi|149813640|gb|EDM73466.1| hypothetical protein RAZWK3B_04560 [Roseobacter sp. AzwK-3b] Length = 225 Score = 70.0 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 57/168 (33%), Gaps = 40/168 (23%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M P +++ +DG N+ S K G K+L Y Sbjct: 1 MAQP---VSVLVDGDNI--SGKHAG------KILSVAAQHGEPTLVRVYADAQRPS---- 45 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVI 118 DW G++++ K++ D+ LA+DA E + + VI Sbjct: 46 -------DWHSAIGYRML-----------HSGTGKNAADILLALDALELLLAKNMRCFVI 87 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 S DG FT L L+ KV + V + R F+++ Sbjct: 88 ASSDGDFTHLATRLREHGAKVIGIGEVKAP-----SAFRACCSDFVEI 130 >gi|260885342|ref|ZP_05896875.1| conserved hypothetical protein [Prevotella tannerae ATCC 51259] gi|260852796|gb|EEX72665.1| conserved hypothetical protein [Prevotella tannerae ATCC 51259] Length = 166 Score = 69.7 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 19/132 (14%), Positives = 35/132 (26%), Gaps = 21/132 (15%) Query: 34 LKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKR 93 + S I Y +++ F + Sbjct: 1 MSFVSSYGNPIIRRIYADWTKSAMKRWK--------EEAKTFSFRLVEVLSYVG------ 46 Query: 94 VKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151 VK++ D+ L +DA + ++ I S D +T L ++ K V Sbjct: 47 VKNTTDMALVIDAMDLLHGKTVQGFCIVSSDSDYTLLAQRIREKGLLVLGYGEQK----- 101 Query: 152 ASDQLRRQADYF 163 L+ F Sbjct: 102 TPASLQNSCHEF 113 >gi|319791586|ref|YP_004153226.1| hypothetical protein Varpa_0897 [Variovorax paradoxus EPS] gi|315594049|gb|ADU35115.1| protein of unknown function DUF88 [Variovorax paradoxus EPS] Length = 273 Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 31/140 (22%), Positives = 55/140 (39%), Gaps = 26/140 (18%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 + +A+FID NL ++ +D+ L + ++ R Y + L Sbjct: 13 KNLAVFIDADNLNDAT-----ALDHVLLALRPMADRVIYRRAY---------GRPESLKA 58 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDG 123 + L +G + VA + K++ D L +DA E + ++ + I SGD Sbjct: 59 IHAVLWRHGVRPVANLIV----------DKTTTDSALVIDAVEAVCTNDIDIVAICSGDA 108 Query: 124 CFTTLVAALQRKVKKVTIVS 143 F L L+ K +V S Sbjct: 109 DFVPLALWLREKGCRVLCYS 128 >gi|114764533|ref|ZP_01443758.1| hypothetical protein 1100011001295_R2601_11629 [Pelagibaca bermudensis HTCC2601] gi|114543100|gb|EAU46119.1| hypothetical protein R2601_11629 [Roseovarius sp. HTCC2601] Length = 60 Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 31/59 (52%), Positives = 45/59 (76%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 MF E++ALFIDG+NLYA++KALGFDIDY+ L + F R ++RA+YYT ++ + E + Sbjct: 1 MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFVRRGKMVRAFYYTALLENDEYR 59 >gi|219667461|ref|YP_002457896.1| hypothetical protein Dhaf_1404 [Desulfitobacterium hafniense DCB-2] gi|219537721|gb|ACL19460.1| protein of unknown function DUF88 [Desulfitobacterium hafniense DCB-2] Length = 296 Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 26/157 (16%), Positives = 53/157 (33%), Gaps = 8/157 (5%) Query: 11 FIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWL 70 FID N++ G+++ L+++ + A Y F Sbjct: 28 FIDYENIWTGLFEQGYELTPEILMESIQLYAKQND---YVLSAIYLYANFDREEFWRAQT 84 Query: 71 HYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ----SEGLEHLVIFSGDGCFT 126 + V + +++ DVEL ++A E + + ++ +GDG F Sbjct: 85 SFEKIHVYTRHVYGKNNFASTGLRRNAADVELILEAQEILLTRTATFDVFLLLTGDGDFL 144 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163 L+ ++ K V ++ V D+F Sbjct: 145 PLLRKVRAWGKDVKVIG-VKGSMHHELQAFSDSGDFF 180 >gi|87303496|ref|ZP_01086279.1| hypothetical protein WH5701_09555 [Synechococcus sp. WH 5701] gi|87281909|gb|EAQ73872.1| hypothetical protein WH5701_09555 [Synechococcus sp. WH 5701] Length = 132 Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 7/77 (9%) Query: 100 VELAVDAFE--QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLR 157 V L +DA + S ++ + S D T L A ++ V + + Sbjct: 19 VALIIDAMDLLHSGRVDGFWLVSSDNDVTRLAARIRAAGLAVYAFGEKKTPKPFVA---- 74 Query: 158 RQADYFMDLAYLKNEIA 174 D F+D L+ ++ Sbjct: 75 -ACDKFIDTEILRKALS 90 >gi|297563529|ref|YP_003682503.1| hypothetical protein Ndas_4611 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296847977|gb|ADH69997.1| protein of unknown function DUF88 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 574 Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 36/187 (19%), Positives = 65/187 (34%), Gaps = 31/187 (16%) Query: 5 REKIALFIDGANLYA--------SSKALGFDIDYRKLLKAFRSRAI------VIRAYYYT 50 ++ ALF+D L A + DY L++ A ++R Y+Y Sbjct: 1 MDRCALFVDAGYLLADGAMAVHGTRNRDSVSWDYTGLVQFLNEVARDRTGLPLLRCYWYE 60 Query: 51 TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110 V D Q + +F R + ++ + D + Sbjct: 61 AVADDRRTQEQDG-------------IADIPGIKFRGARIRPGRREGVESYVQRDLTTLA 107 Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL-- 166 L V+ SGD +VA +Q +VT+V + S LRR+ D +++ Sbjct: 108 RTGVLCDAVLVSGDEDMAPVVADVQDMGVRVTVVHVSVEGNWTISRALRRECDDLIEIGA 167 Query: 167 AYLKNEI 173 +L+ + Sbjct: 168 GHLRPHV 174 >gi|291453992|ref|ZP_06593382.1| conserved hypothetical protein [Streptomyces albus J1074] gi|291356941|gb|EFE83843.1| conserved hypothetical protein [Streptomyces albus J1074] Length = 317 Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 35/191 (18%), Positives = 61/191 (31%), Gaps = 31/191 (16%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53 A+F+D LYA++ L FD+D L+ A RA ++R Y+Y Sbjct: 52 AVFVDAGYLYAAAGRLVTGTEERGAFDLDAEGLIDALIDRARQIFADSRLLRVYWYDGAR 111 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 L K N + +D + D + Sbjct: 112 RRIHTAEQLAIAALP------------DVKVRLGNLNANNQQKGVDSLIRGDLESLARHR 159 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169 + V+ GD + V + Q +V + + +D L + D +DLA+ Sbjct: 160 AISDAVLIGGDEDLVSAVESAQGHGARVHLWGIEAPEGRNQADPLLWEVDTQRTLDLAFF 219 Query: 170 KNEIARDPDED 180 + + R Sbjct: 220 QPYLTRRATTP 230 >gi|94265587|ref|ZP_01289332.1| conserved hypothetical protein [delta proteobacterium MLMS-1] gi|93453916|gb|EAT04271.1| conserved hypothetical protein [delta proteobacterium MLMS-1] Length = 207 Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 28/194 (14%), Positives = 68/194 (35%), Gaps = 23/194 (11%) Query: 7 KIALFIDGANLYASSKA--LGFDIDYRKLLK-AFRSRAIVIRAYYYTTVVGD--PEQQFS 61 + +++IDG NLY + +D R+++ + + + Y+T +V Q + Sbjct: 2 RTSVYIDGFNLYYRALKGTPHKWLDLRQMVANLLQPHHQITQLKYFTAIVSGIFDPSQPN 61 Query: 62 PLHPLLDWLHYN--GFQVVAKVA-------------KEFTENCGRKRVKSSMDVELAVDA 106 + L ++ F V + + K + DV LA+ Sbjct: 62 RQKSYIRALKHHIPNFSVHYGHFLSHEVFAPKAPLTRPPSFTRVIKTEEKGSDVNLAIHL 121 Query: 107 FEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 + + + ++ S D + ++ + KV + S +L++ A + Sbjct: 122 LNDAWLDRYDCAIVISNDSDLVEPLRLVREQNGKVIGL-ISPLLRGHPSRELQKHAHFVK 180 Query: 165 DLAYLKNEIARDPD 178 + +++ P Sbjct: 181 RIREGVLRVSQLPS 194 >gi|224000195|ref|XP_002289770.1| predicted protein [Thalassiosira pseudonana CCMP1335] gi|220974978|gb|EED93307.1| predicted protein [Thalassiosira pseudonana CCMP1335] Length = 735 Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 33/206 (16%), Positives = 67/206 (32%), Gaps = 33/206 (16%) Query: 7 KIALFIDGANLYASS-----------------KALGFDIDYRKLLKAFRSRAIVIRAYYY 49 K LFIDG LY S + +D+ L + + R Sbjct: 162 KAMLFIDGTWLYYSLHARNANRCPIVPRFGQGWQSNYKVDWLALPRLICEQIDKQRNSQT 221 Query: 50 TTVVGDPEQQFSPLHPLLDWLHYNGFQ-VVAKVAKEFTENCGRKR-------VKSSMDVE 101 + D + S + + ++ +E + + +D++ Sbjct: 222 SFKGSDRPLEISRVMVFTSAKKETDPNSIRMRMFREMSNANYDVHMMETVGQGEKCVDIQ 281 Query: 102 LAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS--MASDQL 156 LAV+ + + ++ +GD F + ++K K+V I S S + Sbjct: 282 LAVEMLHYATVPNAYDVAILLTGDKDFVPALVRTRQKGKQVVICSMKTGCNRVLYESPHI 341 Query: 157 RRQADYFMDLAYLKNEIARD-PDEDK 181 R + L +E+ P+E++ Sbjct: 342 RDY--NVVWLEDCLDELIVPIPEEER 365 >gi|262182985|ref|ZP_06042406.1| hypothetical protein CaurA7_03252 [Corynebacterium aurimucosum ATCC 700975] Length = 362 Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 25/134 (18%), Positives = 44/134 (32%), Gaps = 14/134 (10%) Query: 40 RAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMD 99 + R Y+Y + ++ + D G Q+ E+ G +R + ++D Sbjct: 7 GNRIHRQYWYDGIPDTGPHRYQRALRVCD-----GVQLRTGQLIEW----GERRTQKAVD 57 Query: 100 VELAVDAF--EQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLR 157 L D + V+ SGD V +V + SM+S LR Sbjct: 58 TRLVADMIVSAMKGQVTDFVLVSGDADMIPGVQEAVNNGVRVHLYGF--GWDSMSS-ALR 114 Query: 158 RQADYFMDLAYLKN 171 D L ++ Sbjct: 115 HACDSTTILDPRED 128 >gi|237751560|ref|ZP_04582040.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879] gi|229372926|gb|EEO23317.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879] Length = 248 Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 26/161 (16%), Positives = 53/161 (32%), Gaps = 30/161 (18%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 IA+ D N+ ++ +L+ + V+ Y + Sbjct: 2 IAILFDCENVSST--------HIPFILQRLKRFGKVVLKYAFKDWSRQS----------- 42 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDGCF 125 DW + + F K K++ D+++ A++ +EH+ I S D F Sbjct: 43 DWTQQVVEEYGMIPIQVFR----HKNFKNTSDLKIQASAYKILYESNIEHICIVSSDSDF 98 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 + +Q K K + + L+ +F+ L Sbjct: 99 RDIALEIQAKGKISIGFGEMK-----TPESLQNAYTHFIHL 134 >gi|218529118|ref|YP_002419934.1| hypothetical protein Mchl_1107 [Methylobacterium chloromethanicum CM4] gi|218521421|gb|ACK82006.1| conserved hypothetical protein [Methylobacterium chloromethanicum CM4] Length = 246 Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 33/187 (17%), Positives = 65/187 (34%), Gaps = 17/187 (9%) Query: 4 PREKIALFIDGANLYASSKALGFDI----DYRKLLKAFRSRA--IVIRAYYYTTVVGDPE 57 R + AL+IDG NLY S LG ++ KL ++ R ++R + T Sbjct: 10 SRIRAALYIDGFNLYHSVNDLGESFLKWCNFWKLGESIIPRQSEELVRVVFCTAYYPGDH 69 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVA-----KEFTENCGR-KRVKSSMDVELAVDAFEQS- 110 + L+ L G + + K K + + D+ LA+ ++ + Sbjct: 70 SKKIRHERLVRALKLVGVETILGHFSKEDAKCRDCGSAWQKPTEKATDINLALSVYDDAV 129 Query: 111 -EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 + ++ + + D ++ K +VS + + L +A Sbjct: 130 QDAMDTAYLLTADTDQAATAELFAKRFPKKKLVSVSPPGRTHSQHILSHTPHK---IALN 186 Query: 170 KNEIARD 176 + I R Sbjct: 187 REHIERA 193 >gi|32455334|ref|NP_862346.1| hypothetical protein pHel5_14 [Helicobacter pylori] gi|20502866|gb|AAM22673.1|AF469113_13 unknown [Helicobacter pylori] Length = 197 Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 28/185 (15%), Positives = 54/185 (29%), Gaps = 28/185 (15%) Query: 2 FDPREKIALFIDGANLYASS-----KALGFDIDYRKLLKAFRSRA--------------I 42 + +K A+F+D NL K DY + Sbjct: 1 MNHTQKTAIFVDFENLRIGVFDKTWKKKRLFFDYNNNPQKVVDFCNLCVFDSYHDKDLLN 60 Query: 43 VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQ-VVAKVAKEFTENCGRKRVKSSMDVE 101 + R ++YT D + + L L + + G V+ +D+ Sbjct: 61 LYRIFFYTAKPLDSHSKKKDILNFLSTLECLNHTALRLGKLVKR----GDVEVQKQVDML 116 Query: 102 LAVDAFE--QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQ 159 L +D E +E +V+ D + + + + I+ L + Sbjct: 117 LGIDMLEISLKHFVEKVVLIGYDSDMSPALKLARTNGIQTEIILFED-LKQKIEPSLTKH 175 Query: 160 ADYFM 164 D F+ Sbjct: 176 CD-FI 179 >gi|239982145|ref|ZP_04704669.1| hypothetical protein SalbJ_22130 [Streptomyces albus J1074] Length = 302 Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 35/191 (18%), Positives = 61/191 (31%), Gaps = 31/191 (16%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53 A+F+D LYA++ L FD+D L+ A RA ++R Y+Y Sbjct: 37 AVFVDAGYLYAAAGRLVTGTEERGAFDLDAEGLIDALIDRARQIFADSRLLRVYWYDGAR 96 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 L K N + +D + D + Sbjct: 97 RRIHTAEQLAIAALP------------DVKVRLGNLNANNQQKGVDSLIRGDLESLARHR 144 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169 + V+ GD + V + Q +V + + +D L + D +DLA+ Sbjct: 145 AISDAVLIGGDEDLVSAVESAQGHGARVHLWGIEAPEGRNQADPLLWEVDTQRTLDLAFF 204 Query: 170 KNEIARDPDED 180 + + R Sbjct: 205 QPYLTRRATTP 215 >gi|302542712|ref|ZP_07295054.1| conserved hypothetical protein [Streptomyces hygroscopicus ATCC 53653] gi|302460330|gb|EFL23423.1| conserved hypothetical protein [Streptomyces himastatinicus ATCC 53653] Length = 309 Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 32/187 (17%), Positives = 61/187 (32%), Gaps = 31/187 (16%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53 A+F+D +YA++ L F++D +++AF +A ++R Y++ Sbjct: 41 AIFVDAGYVYAAAGRLVAGTEDRRAFELDAEGIIEAFIDKARMIFPDSRLLRVYWFDGAR 100 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 L K N + +D + D + Sbjct: 101 RRIHTPEQQSIAELP------------DVKVRLGNLNANNQQKGVDSLIRSDLESLARHR 148 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169 + V+ GD + V A Q +V + D ++ L + D DL + Sbjct: 149 AIGDAVLIGGDEDLVSAVEAAQGYGARVHLWGIEALDGRNQAEPLLWEVDSQRTFDLDFC 208 Query: 170 KNEIARD 176 K + R Sbjct: 209 KPYVTRR 215 >gi|317011853|gb|ADU85599.1| hypothetical protein HPSA_08374 [Helicobacter pylori SouthAfrica7] Length = 193 Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 30/198 (15%), Positives = 62/198 (31%), Gaps = 31/198 (15%) Query: 2 FDPREKIALFIDGANLYASS-----KALGFDIDYRKLLKAFRSRA--------------I 42 + +K A+F+D NL K DY + Sbjct: 1 MNHTQKTAIFVDFENLRIGVFNKTWKKKRLFFDYNNNPQKVVDFCNLCVFDSYHDKDLLN 60 Query: 43 VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQ-VVAKVAKEFTENCGRKRVKSSMDVE 101 + R ++YT D + + L L + + G V+ +D+ Sbjct: 61 LYRIFFYTAKPLDSHSKKEDILKFLSTLECLNHTALRLGKLVKR----GDVEVQKQVDML 116 Query: 102 LAVDAFE--QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQ 159 L +D E +E +V+ D + + + + I+ + + S L + Sbjct: 117 LGIDMLEISLKHFVEKVVLIGYDSDMSPALKLARTNGIQTEIILFEDLEQKIES-SLTKH 175 Query: 160 ADYFMD---LAYLKNEIA 174 D F+ + + N++ Sbjct: 176 CD-FIKKVRIEDIYNKLG 192 >gi|33329851|gb|AAQ10302.1| hypothetical protein [Gram-negative bacterium 0471] Length = 126 Score = 68.5 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 25/150 (16%), Positives = 48/150 (32%), Gaps = 27/150 (18%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + A+ +DG N S Y+ +L+ + + + Y + + Sbjct: 1 MNSTLNFAVLVDGENAQPS--------KYQDILREVSQKGNIASKWVYADWTNPTHKSWK 52 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVI 118 + + + ++F K + D L +DA E S+ + + I Sbjct: 53 DIM----------LETGSAPKQQFHY------CKDAADHALIMDAIELICTSDKINAICI 96 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSD 148 S DG F L + K V V + Sbjct: 97 VSSDGGFAGLAQRISEKGLHVMAVGKKDTP 126 >gi|148359486|ref|YP_001250693.1| hypothetical protein LPC_1394 [Legionella pneumophila str. Corby] gi|148281259|gb|ABQ55347.1| hypothetical protein LPC_1394 [Legionella pneumophila str. Corby] Length = 211 Score = 68.5 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 62/183 (33%), Gaps = 23/183 (12%) Query: 4 PREKIALFIDGANLYASS--KALGFDIDYRKL-LKAFRSRAIVIRAYYYTTV---VGDPE 57 ++ ++IDG NLY + +D + L + S + + YYT E Sbjct: 2 NNKRTTIYIDGFNLYYGCLKRTSYKWLDLKALFINLLESSHNIQKIKYYTAPISSRDGNE 61 Query: 58 QQFSPLHPLLDW------------LHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAV 104 L HY +V AKV + K + DV LA+ Sbjct: 62 ASRFRQKYYLQALESYIPEIEIYYGHYLTHEVSAKVVNPPPDFIKIYKTEEKGSDVNLAL 121 Query: 105 DAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLS-DPSMASDQLRRQAD 161 + + + VI S D + ++ + K+ V + S +L + AD Sbjct: 122 HVLNDAWLDAYDCAVIVSNDSDLAESLRLVKSQTNKLIGVVFPNTDHKRRPSRELAKYAD 181 Query: 162 YFM 164 F+ Sbjct: 182 -FI 183 >gi|239813864|ref|YP_002942774.1| hypothetical protein Vapar_0855 [Variovorax paradoxus S110] gi|239800441|gb|ACS17508.1| protein of unknown function DUF88 [Variovorax paradoxus S110] Length = 272 Score = 68.5 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 32/140 (22%), Positives = 55/140 (39%), Gaps = 26/140 (18%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 + +A+FID NL ++ +D+ L + I+ R Y + L Sbjct: 13 KSMAVFIDADNLNDAT-----ALDHVLLALRSMADRILYRRAY---------GRPESLKS 58 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDG 123 + L +G + VA + K++ D L +DA E + ++ + I SGD Sbjct: 59 IHAVLWRHGVRPVANLIV----------DKTTTDSALVIDAVEAVCTNDIDIVAICSGDA 108 Query: 124 CFTTLVAALQRKVKKVTIVS 143 F L L+ K +V S Sbjct: 109 DFVPLAIWLREKGCRVLCYS 128 >gi|332158254|ref|YP_004423533.1| hypothetical protein PNA2_0613 [Pyrococcus sp. NA2] gi|331033717|gb|AEC51529.1| hypothetical protein PNA2_0613 [Pyrococcus sp. NA2] Length = 194 Score = 68.1 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 35/188 (18%), Positives = 67/188 (35%), Gaps = 41/188 (21%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 ++IAL +DG N+ K LG + +++A + A Sbjct: 26 KRIALLVDGPNILR--KELGIHL--EDIVEALSKLGNIRVAKVILNQYAP--------QS 73 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDG 123 L++ + GF+ V V + V+LAV+A + ++ L + + + Sbjct: 74 LIEAVSNQGFEPVI--------------VAGEIGVKLAVEAMREVYNPNIDILALATRNT 119 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA---------YLKNEIA 174 F ++ + K K+ I+ S L+ ADY + L K+ Sbjct: 120 EFVPIILKAKEKGKETAIIGVEPGF----SSALKHAADYVIILEPRGEVSEERDFKDIEE 175 Query: 175 RDPDEDKK 182 RD ++ Sbjct: 176 RDGRRKER 183 >gi|171315862|ref|ZP_02905092.1| protein of unknown function DUF88 [Burkholderia ambifaria MEX-5] gi|171098958|gb|EDT43746.1| protein of unknown function DUF88 [Burkholderia ambifaria MEX-5] Length = 131 Score = 68.1 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 5/116 (4%) Query: 25 GFDIDYRKLLKAFRSRA-IVIRAYYYTTVVGDPEQQ----FSPLHPLLDWLHYNGFQVVA 79 G + Y L + R + Y + + + + L GF+V Sbjct: 6 GHLMRYEVLRSLAGRAGATIQRLHAYLSFDERRAARSPDYDARIKGYQAALRDKGFRVTI 65 Query: 80 KVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRK 135 K + + + G + VKS+ D+ +A+DA +S+ L+ ++I + DG F +V ALQ+K Sbjct: 66 KPLRHYADEDGTETVKSNSDLGMAIDALSESDRLDTVLIATSDGDFVEVVRALQKK 121 >gi|84497148|ref|ZP_00995970.1| hypothetical protein JNB_13178 [Janibacter sp. HTCC2649] gi|84382036|gb|EAP97918.1| hypothetical protein JNB_13178 [Janibacter sp. HTCC2649] Length = 386 Score = 68.1 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 58/172 (33%), Gaps = 28/172 (16%) Query: 8 IALFIDGANLYASS--------KALGFDIDYRKLLKAFRSRAI------VIRAYYYTTVV 53 A+++D L AS+ G ++DY L+ ++ ++R +Y + Sbjct: 5 CAVYVDVGYLLASAATRVTGSSLRSGIEVDYPGLIAGLVAQVEADSGLPLLRVNWYDSGA 64 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SE 111 Q G K+ G + +DV L +D Q + Sbjct: 65 RSGGQPDYHQ-------DQIGLLPRIKLRLGRLSYAG---EQKGVDVRLGLDLALQGRAR 114 Query: 112 GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTV--LSDPSMASDQLRRQAD 161 + + + SGD T V Q +V ++S S LRR AD Sbjct: 115 VADVVYLVSGDDDLTEAVEEAQSAGVQVVLLSVPGLNGHGHAVSKHLRRAAD 166 >gi|219128471|ref|XP_002184436.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217404237|gb|EEC44185.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 779 Score = 68.1 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 57/189 (30%), Gaps = 57/189 (30%) Query: 7 KIALFIDGANLYASS-----------KALGF----DIDY------RKLLKAFRSRA---- 41 K LFIDG LY S + G D+ R L ++ R Sbjct: 223 KAMLFIDGTWLYYSIYERTEARCPIIQRYGRGWQNRYDFHWAALPRILCESLRDPGWSTN 282 Query: 42 --------------------IVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKV 81 ++RA +T+ D D N + V Sbjct: 283 TAAPAHTTTHESATKNARPMEIVRASVFTSYKADTPTSSFRYQMFQDMQAAN-YDVHMME 341 Query: 82 AKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKK 138 + +D++LAV+ + + ++ +GD F + ++K +K Sbjct: 342 TVGR--------GEKCVDIQLAVEMMHYATVPNAYDVALLLTGDKDFMPAMIRTRQKARK 393 Query: 139 VTIVSTVLS 147 V +VS Sbjct: 394 VGLVSMKTG 402 >gi|284038322|ref|YP_003388252.1| hypothetical protein Slin_3445 [Spirosoma linguale DSM 74] gi|283817615|gb|ADB39453.1| protein of unknown function DUF88 [Spirosoma linguale DSM 74] Length = 338 Score = 68.1 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 67/202 (33%), Gaps = 36/202 (17%) Query: 7 KIALFIDGANLYASSKALGF------DIDYRKLLKAFRSR-----------AIVIRAYYY 49 +I +F DG S + I L R + ++ A+Y+ Sbjct: 9 RIGVFYDGNYFLHVSNYYNYSHERRSRISISGLHAFIRRQVAEEEGVNERLCQIVDAHYF 68 Query: 50 TTVVGDPEQQFSPLHPLLD-----WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAV 104 + E D L G K + R + +DV LA+ Sbjct: 69 RGRLNAHEANQRGNQLFYDRLFDDILMSEGVVTHYLPVKTYQG----YRQEKGIDVWLAL 124 Query: 105 DAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS--------TVLSDPSMASD 154 +AFE ++ + +V+ + DG + L+ L ++ ++S + S Sbjct: 125 EAFELAQYKKFDVVVLITSDGDYVPLIRKLNTLGSRIMVLSWDFEFLNEQGEKQVTRTSQ 184 Query: 155 QLRRQADYFMDLAYLKNEIARD 176 L + Y + + L ++ +R Sbjct: 185 DLLEEVSYPVGMHGLIDDRSRR 206 >gi|320538110|ref|ZP_08038007.1| hypothetical protein HMPREF9554_02765 [Treponema phagedenis F0421] gi|320145044|gb|EFW36763.1| hypothetical protein HMPREF9554_02765 [Treponema phagedenis F0421] Length = 323 Score = 68.1 bits (165), Expect = 6e-10, Method: Composition-based stats. Identities = 24/168 (14%), Positives = 51/168 (30%), Gaps = 32/168 (19%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 + AL IDG N+ S + L ++ + Y + L Sbjct: 2 EKNYALLIDGDNI--SPRYL------EAIVNEVSKEGEIQIKRIYGDWTTVNMNGWKSLL 53 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHL---VIFSG 121 ++ + ++F ++ D + ++A E + +++ I S Sbjct: 54 A----------KIPVRPVQQFRYG------DNATDNTIIMEAIELANNNKNINAICIVST 97 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 D + +L L+ V + + S + F L L Sbjct: 98 DADYYSLALKLREYGLYVLGIGRSNAKDIWVS-----SCNEFKYLENL 140 >gi|218248953|ref|YP_002374324.1| hypothetical protein PCC8801_4244 [Cyanothece sp. PCC 8801] gi|257062039|ref|YP_003139927.1| hypothetical protein Cyan8802_4306 [Cyanothece sp. PCC 8802] gi|218169431|gb|ACK68168.1| protein of unknown function DUF88 [Cyanothece sp. PCC 8801] gi|256592205|gb|ACV03092.1| protein of unknown function DUF88 [Cyanothece sp. PCC 8802] Length = 299 Score = 67.7 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 61/167 (36%), Gaps = 28/167 (16%) Query: 1 MFDPRE--KIALFIDGANLYASSKALGFD------IDYRKLLKAFRSR-----------A 41 M ++ +I +F DG S ++ + L + R + Sbjct: 1 MTQDQKLTRIGIFYDGNYFLHVSNYYNYNHERKARVSIPGLHEFIRHQVAKEEGVDVRLC 60 Query: 42 IVIRAYYYTTVVGDPEQQFSPL---HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSM 98 ++ A+Y+ + E + L D L G + G K + + Sbjct: 61 QIVDAHYFRGRLSAGEASRNQLYYDRVFDDILMSEGVITHYLPLR----TWGGKMEEKGI 116 Query: 99 DVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS 143 DV LA++AFE + + LV+ + DG + LV L +V ++S Sbjct: 117 DVWLALEAFELAFYKRFSVLVLIACDGDYVPLVRKLNTLGTRVMVLS 163 >gi|188583320|ref|YP_001926765.1| hypothetical protein Mpop_4114 [Methylobacterium populi BJ001] gi|179346818|gb|ACB82230.1| hypothetical protein Mpop_4114 [Methylobacterium populi BJ001] Length = 246 Score = 67.7 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 28/135 (20%), Positives = 52/135 (38%), Gaps = 14/135 (10%) Query: 4 PREKIALFIDGANLYASSKALGFDI----DYRKLLKAFRSRA--IVIRAYYYTTVVGDPE 57 R + AL+IDG NLY S LG ++ KL ++ SR ++R + T Sbjct: 10 SRIRAALYIDGFNLYHSVNDLGEPFLKWCNFWKLGESIISRQSEELVRVVFCTAYYPGDH 69 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVA-----KEFTENCGR-KRVKSSMDVELAVDAFEQS- 110 + L+ L G + V K K + + D+ LA+ ++ + Sbjct: 70 SKKIRHERLVRALKLVGVETVLGHFSHEDAKCRDCGSTWQKPTEKATDINLALSVYDDAV 129 Query: 111 -EGLEHLVIFSGDGC 124 + ++ + + D Sbjct: 130 QDVMDTAYLLTADTD 144 >gi|292656541|ref|YP_003536438.1| hypothetical protein HVO_2415 [Haloferax volcanii DS2] gi|291370393|gb|ADE02620.1| Uncharacterized conserved protein [Haloferax volcanii DS2] Length = 158 Score = 67.4 bits (163), Expect = 8e-10, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 57/168 (33%), Gaps = 32/168 (19%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRS-RAIVIRAYYYTTVVGDPEQQFSP 62 P ++ALF+DG N+ FD+D + A RS + A Y Sbjct: 14 PSGRVALFVDGPNV----LRDEFDVDLDDIRAAGRSLGGQLSAARLYL--------DEHA 61 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFS 120 L+ GF+VV +DV+LAVD + + + + + S Sbjct: 62 TPGLIQAAEARGFEVVV--------------TSGDVDVKLAVDLTRYAVEDRADVIAVAS 107 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 D F + + ++ SD L+ A + M L Sbjct: 108 RDTDFKPALETANAYGLRTVAIAPGSYGR---SDALQNAATHAMTLDE 152 >gi|332703414|ref|ZP_08423502.1| protein of unknown function DUF88 [Desulfovibrio africanus str. Walvis Bay] gi|332553563|gb|EGJ50607.1| protein of unknown function DUF88 [Desulfovibrio africanus str. Walvis Bay] Length = 179 Score = 67.4 bits (163), Expect = 8e-10, Method: Composition-based stats. Identities = 31/183 (16%), Positives = 61/183 (33%), Gaps = 18/183 (9%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRS-RAIVIRAYYYTTVVGDPEQQFSP 62 +++ +DG+ L KA DY KL Y+ DP + Sbjct: 2 NEKRVIWIVDGSYL---LKAPKGKFDYLKLKDTLEDLNGCPFYESYFLDSTLDPSDAQNA 58 Query: 63 LHPLLDWLHYNG-------FQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--L 113 + L G ++V + + V+ +DV + + Sbjct: 59 FYTWLKTAPPKGPKMRVRLYKVKTLSFRCPNGEYVERHVQKGVDVGITTLLIRLATQGMY 118 Query: 114 EHLVIFSGDGCFTTLVAALQR-KVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 + LV+ +GDG F ++ ++ K+ + + S L+ AD + L + Sbjct: 119 DRLVLSTGDGDFEDAISYIKEDLHKEFWLAGFTDT----ISADLQCYADRVVWLDDHWEK 174 Query: 173 IAR 175 I + Sbjct: 175 IRK 177 >gi|293443850|ref|ZP_06662273.1| predicted protein [Escherichia coli B088] gi|291323775|gb|EFE63202.1| predicted protein [Escherichia coli B088] Length = 214 Score = 67.4 bits (163), Expect = 8e-10, Method: Composition-based stats. Identities = 27/185 (14%), Positives = 67/185 (36%), Gaps = 18/185 (9%) Query: 2 FDPREKIALFIDGANLYASSKAL----GFDIDYRKLLKAFRSR--AIVIRAYYYTTVVGD 55 P++++ FIDG NLY + +D KL + S+ ++ ++++ Sbjct: 3 EPPKKRVQCFIDGYNLYHAIDETRETKNHWVDLWKLASKYISKNTCVLSDVFWFSAPPVH 62 Query: 56 PEQQFSPLH-PLLDWLHYNGFQVVAKVAKEFTENCG---------RKRVKSSMDVELAVD 105 ++ LH L + G VV+ K +C + + DV LA+ Sbjct: 63 LTKRKQELHANYSAALQHCGVSVVSGKFKLKRVSCNAGSGCGKSFDRHEEKESDVNLAIG 122 Query: 106 AFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163 + + + ++ + D + ++ + + + ++ L+ A+ Sbjct: 123 LVSAACNDEFDIAIVITADSDLCPPIKYVRNRFPNKQVWILIPPKRRSRANDLKAIANRD 182 Query: 164 MDLAY 168 ++ Sbjct: 183 FEITN 187 >gi|317132397|ref|YP_004091711.1| hypothetical protein Ethha_1443 [Ethanoligenens harbinense YUAN-3] gi|315470376|gb|ADU26980.1| hypothetical protein Ethha_1443 [Ethanoligenens harbinense YUAN-3] Length = 201 Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats. Identities = 30/204 (14%), Positives = 65/204 (31%), Gaps = 37/204 (18%) Query: 5 REKIALFIDGANLYASSKALGFD-------IDYR----KLLKAFRSRAIVIRAYYYTTVV 53 +++ +FID N + D +DY +L K +++ + + Sbjct: 1 MQRVMVFIDQLNFEIALLNYYRDNGSQAPRLDYNAIPVELTKLLPGENHLVKTFLFVPKP 60 Query: 54 GDPEQQFSPLHPLLDW----LHYNGFQVVAKVAKEF----------TENCGRKRVKSSMD 99 + +W + + F V+ + + + D Sbjct: 61 DEFLMNLPRWQHYSNWINGMKNQHYFTVIEGSYVARQIDESIPMDANDPRSYYKEEKGTD 120 Query: 100 VELAVDAFE--QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLR 157 + +AV + +I SGD + T++ L K T+++ V S LR Sbjct: 121 INIAVHVLTKGFMNAYDTALILSGDSDYVTVLDILNMIGK-TTVIAGVKGQ--NISK-LR 176 Query: 158 RQADYFMDLAY------LKNEIAR 175 + D + L+++ R Sbjct: 177 KSCDDSYIIDDTFFQKCLRDDSKR 200 >gi|328948489|ref|YP_004365826.1| hypothetical protein Tresu_1630 [Treponema succinifaciens DSM 2489] gi|328448813|gb|AEB14529.1| Domain of unknown function DUF88 [Treponema succinifaciens DSM 2489] Length = 325 Score = 67.4 bits (163), Expect = 9e-10, Method: Composition-based stats. Identities = 25/169 (14%), Positives = 53/169 (31%), Gaps = 30/169 (17%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 KIA+F D N+ + + IDY + ++ Y + + Sbjct: 6 KIAVFFDSENVP--ADKVPLIIDY------LSGKGDILFQRAYADWSVSNTKSWKDQLN- 56 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG---LEHLVIFSGDG 123 + ++F K ++D + +DA E + + I + D Sbjct: 57 ---------KTPITAIQQF-----HHNEKQAVDKLIMMDAIEMAINHADINLFAIIASDN 102 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 + +L L+ K+V + + + + F L L + Sbjct: 103 GYHSLALRLRELGKRVIGIGEKAKCNPIW----IKSCNEFSYLEDLDEK 147 >gi|300710717|ref|YP_003736531.1| hypothetical protein HacjB3_06760 [Halalkalicoccus jeotgali B3] gi|299124400|gb|ADJ14739.1| hypothetical protein HacjB3_06760 [Halalkalicoccus jeotgali B3] Length = 157 Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 55/162 (33%), Gaps = 31/162 (19%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 + L +DG N+ FD+D + ++ Y L+ Sbjct: 22 VGLLVDGPNV----LREEFDVDLDDVRAVGDDAGTLVATRLYL--------DEHATPGLI 69 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCF 125 G++VV +DV+LA+DA E ++ ++ L++ S D F Sbjct: 70 QAAEARGYEVVI--------------TSGDVDVKLAIDATELVYTDAVDTLMVVSRDTDF 115 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 ++ ++ V+ SD LR A + L Sbjct: 116 KPVLEKAAKRGIHTVAVAPGTYGR---SDALRNAAQEAVLLD 154 >gi|241765008|ref|ZP_04763004.1| protein of unknown function DUF88 [Acidovorax delafieldii 2AN] gi|241365405|gb|EER60198.1| protein of unknown function DUF88 [Acidovorax delafieldii 2AN] Length = 358 Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 53/172 (30%), Gaps = 34/172 (19%) Query: 9 ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68 A+FID NL ++ D R + + RAY + E Sbjct: 17 AVFIDADNLNEATALDHVLTDLRHRAERVLYK----RAYGRVDSLKGIESVLWRH----- 67 Query: 69 WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFT 126 G + V K + D L +DA E ++ ++ + I SGD F Sbjct: 68 -----GVRPV----------SNMIVNKVTTDSALVIDAVEAVCTQDIDTVAICSGDADFV 112 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 L ++ + V S + S+ D + L + + Sbjct: 113 PLATWVRERGCHVLCFSLSNKIFAN-SESF---YDEVI----LLEVVEKPES 156 >gi|169236305|ref|YP_001689505.1| hypothetical protein OE3283F [Halobacterium salinarum R1] gi|167727371|emb|CAP14159.1| conserved hypothetical protein [Halobacterium salinarum R1] Length = 152 Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 54/157 (34%), Gaps = 31/157 (19%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +ALF+DG N+ FD+D + + + Y PL+ Sbjct: 17 VALFVDGPNV----LRDEFDVDLDDVREIAGEVGPLAVTRLYL--------DEHATPPLI 64 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCF 125 G+ V +DV+LAVDA E +G++ L + S D F Sbjct: 65 QAGEARGYDVRV--------------TSGDVDVKLAVDATELVLDDGVDVLAVASRDTDF 110 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162 + +R+ + ++ SD LR A Sbjct: 111 KPVFEQAERRGVRTLAIAPGEHGR---SDALRNAATD 144 >gi|18978411|ref|NP_579768.1| hypothetical protein PF2039 [Pyrococcus furiosus DSM 3638] gi|18894253|gb|AAL82163.1| hypothetical protein PF2039 [Pyrococcus furiosus DSM 3638] Length = 162 Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 29/167 (17%), Positives = 58/167 (34%), Gaps = 32/167 (19%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 I L IDG N+ F I + KA + A L+ Sbjct: 26 IGLIIDGPNI----LRKEFKIRLEDIKKALEKIGKIRVAKVVLNQYAP--------QGLI 73 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCF 125 + + GF+ + V DV +A++A E ++ L + + D F Sbjct: 74 EAVVNQGFEPII--------------VAGDTDVRVAIEAMELIYNSDIDVLALATRDADF 119 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 +++ +R+ K+ ++ + L+ ADY + + + + Sbjct: 120 LPIISEAKRRGKETVVIGVEPGF----AVALQNAADYVIIMEKREED 162 >gi|325958516|ref|YP_004289982.1| hypothetical protein Metbo_0759 [Methanobacterium sp. AL-21] gi|325329948|gb|ADZ09010.1| protein of unknown function DUF88 [Methanobacterium sp. AL-21] Length = 163 Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 22/163 (13%), Positives = 50/163 (30%), Gaps = 32/163 (19%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 + + L +DG N+ F ++ + + Sbjct: 24 KNVGLLVDGPNM----LRKEFSLNLDIVRDIIAEYGNMRVGKV--------LLNQYASDK 71 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDG 123 L++ + G+ + V DV +AV+A E ++ + + + D Sbjct: 72 LIEAIVNQGYTPIV--------------VAGDTDVYMAVEAMELIYNPNIDIIALMTRDA 117 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 F ++ + K+ ++ S L+ AD + L Sbjct: 118 DFLPIINKAKENGKETLVIGAEPGF----SAALQNSADSAIVL 156 >gi|119472307|ref|ZP_01614467.1| hypothetical protein ATW7_14156 [Alteromonadales bacterium TW-7] gi|119445029|gb|EAW26325.1| hypothetical protein ATW7_14156 [Alteromonadales bacterium TW-7] Length = 227 Score = 66.6 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 32/140 (22%), Positives = 48/140 (34%), Gaps = 26/140 (18%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 +K ALFID N+ Y + + A V +AY V L P Sbjct: 5 KKTALFIDAENISH---------KYIEQIMAKFEHIEVKKAYGNFGAV--------QLKP 47 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDG 123 ++ ++V + K ++ D+ L V E ++ I S D Sbjct: 48 WVNICSRFAIEMVY-------QEKLVKSKSNAADIALTVGVMESLYVSPIDTFAIASSDS 100 Query: 124 CFTTLVAALQRKVKKVTIVS 143 F LV L+R KKV Sbjct: 101 DFAALVHFLRRNGKKVIGFG 120 >gi|303246560|ref|ZP_07332839.1| protein of unknown function DUF88 [Desulfovibrio fructosovorans JJ] gi|302492270|gb|EFL52145.1| protein of unknown function DUF88 [Desulfovibrio fructosovorans JJ] Length = 283 Score = 66.6 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 61/189 (32%), Gaps = 34/189 (17%) Query: 5 REKIALFIDGANLYASS-----------KALGFDID----YRKLLKAFRSRAIVIRAYYY 49 +++A+F+D + + ID + K S ++R Y+Y Sbjct: 1 MDRVAIFVDAGYFCTGGGSSIAGRKTKRREVNVKIDNTIAFLKEKSKKLSGLPLLRIYWY 60 Query: 50 TTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ 109 + + A K + +D + D E Sbjct: 61 DGALSQNLTTEQQ------------YIASAADVKLRLGTVNGYGEQKGVDARIVTDLTEL 108 Query: 110 SE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF--MD 165 S + V+ +GD V Q + +V ++S S S LRR+AD + Sbjct: 109 SRLNAICDAVLLAGDEDLRIGVELAQAQGVRVHLLSIQNSG---CSTPLRREADTCSEIS 165 Query: 166 LAYLKNEIA 174 + +KN I+ Sbjct: 166 IDEIKNLIS 174 >gi|329850271|ref|ZP_08265116.1| hypothetical protein ABI_31720 [Asticcacaulis biprosthecum C19] gi|328840586|gb|EGF90157.1| hypothetical protein ABI_31720 [Asticcacaulis biprosthecum C19] Length = 240 Score = 65.8 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 60/171 (35%), Gaps = 15/171 (8%) Query: 5 REKIALFIDGANLYASSKALGF----DIDYRKLLKAFRSRAI-VIRAYYYTTVVGDPEQQ 59 R++ A + DG NLY + A ++ + L +A R+ + R + + + + Sbjct: 16 RQRAAFYFDGFNLYHAVDAYKRPYLKWLNLKALARAVAPRSEAIKRVVWCSAYRPQNKSK 75 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRK------RVKSSMDVELAVDAFEQSEG- 112 L G +++C ++ DV LA+ +E Sbjct: 76 LKRHEDYRKALEGQGVICRMGHFVHASDSCNACGHNWQLHIEKQGDVNLALSIAADAEDD 135 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKV--KKVTIVSTVLSDPSMASDQLRRQA 160 + + + DG ++ + KK+ +VS P+ ++L Sbjct: 136 LFDVCYLVTADGDHAATARYIRERFPKKKLVLVSPPGRHPNRHIERLAHAC 186 >gi|313125619|ref|YP_004035889.1| hypothetical protein Hbor_08480 [Halogeometricum borinquense DSM 11551] gi|312291984|gb|ADQ66444.1| uncharacterized conserved protein [Halogeometricum borinquense DSM 11551] Length = 177 Score = 65.8 bits (159), Expect = 3e-09, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 50/164 (30%), Gaps = 31/164 (18%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 ++ALF+DG N+ FD+D + +A Y L Sbjct: 31 RVALFVDGPNV----LRDEFDVDLDDVREAAAEIGRPTATRLYL--------DEHATPGL 78 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124 + GF+VV +DV LAVD + + + + + S D Sbjct: 79 IQAAEARGFEVVI--------------TSGDVDVRLAVDITQFAVEGRADVIAVASRDTD 124 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F + + ++ SD LR A L Sbjct: 125 FKPAIETANAYGLRTFAIAPGEFGR---SDALRNAATDSATLGD 165 >gi|331746820|ref|YP_004422857.1| hypothetical protein TERMP_02242 [Thermococcus barophilus MP] gi|315185031|gb|ADT85215.1| hypothetical protein TERMP_02242 [Thermococcus barophilus MP] Length = 182 Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 34/163 (20%), Positives = 56/163 (34%), Gaps = 25/163 (15%) Query: 7 KIALFIDGANLYASSK-------ALGFDIDYRKLLKAFRS-RAIVIRAYYYTTVVGDPEQ 58 K A+ IDG N+ + L DI+++K K S V A Y Sbjct: 2 KAAVLIDGENVVMCLRDVVGGKVHLDKDINWKKFFKYLESLDYEVTIARIYAN-----PF 56 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEH 115 F + + L G +VV + KS+ D + VD ++ Sbjct: 57 IFLKNPHIANNLEKMGIKVVLADSTMKENGP-----KSTTDATMIVDGISILYERPAIDA 111 Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRR 158 +VI SGD F L + + V + P ++ ++ Sbjct: 112 IVIVSGDRDFLPLAEKAKELGRTVLFAAF----PDSTANVIKN 150 >gi|291545850|emb|CBL18958.1| Protein of unknown function DUF88 [Ruminococcus sp. SR1/5] Length = 185 Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 31/82 (37%), Gaps = 8/82 (9%) Query: 102 LAVDAFE--QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQ 159 + +DA + S ++ I S D FT L A L+ V + + S Sbjct: 1 MIIDAMDILYSGNVDGYCIVSSDSDFTRLAARLRESGMLVLGMGEEKTPKPFIS-----A 55 Query: 160 ADYFMDLAYL-KNEIARDPDED 180 + F L L +N+ + ED Sbjct: 56 CNQFKYLDLLYRNQQEEEKKED 77 >gi|229496814|ref|ZP_04390524.1| cold shock protein [Porphyromonas endodontalis ATCC 35406] gi|229316269|gb|EEN82192.1| cold shock protein [Porphyromonas endodontalis ATCC 35406] Length = 298 Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 33/197 (16%), Positives = 69/197 (35%), Gaps = 35/197 (17%) Query: 7 KIALFIDGANLYASSKALGF------DIDYRKLLKAFRSR-----------AIVIRAYYY 49 +I +F DG S + + L +++ ++ A+Y+ Sbjct: 9 RIGVFYDGNYFLHVSNYYNYSHERKNRLSIAGLHHFIKNQVAQQESTDERLCQIVDAHYF 68 Query: 50 TTVVGDPEQQFSPL-----HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAV 104 + E + + D L G + G + + +DV LA+ Sbjct: 69 RGRLTANEAKATGQTLYYDRLFDDILSSEGVTTHYLPLR---SKQGGGKQEKGIDVWLAL 125 Query: 105 DAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVST--------VLSDPSMASD 154 +AFEQ+ + LV+ + DG + L+ L +V ++S S + S Sbjct: 126 EAFEQAFYKRFNVLVLIACDGDYVPLIRKLNALGTRVMVLSWDFEYTNDNGKSMTTRTSQ 185 Query: 155 QLRRQADYFMDLAYLKN 171 +L + Y + + + + Sbjct: 186 ELLEEVTYPIAMHEIID 202 >gi|332296842|ref|YP_004438764.1| protein of unknown function DUF88 [Treponema brennaborense DSM 12168] gi|332179945|gb|AEE15633.1| protein of unknown function DUF88 [Treponema brennaborense DSM 12168] Length = 332 Score = 65.0 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 27/165 (16%), Positives = 57/165 (34%), Gaps = 26/165 (15%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 A+ D N+ + + ++ + A + + + + Sbjct: 7 TAILWDIENVTPPAGTSY----IQSIIDTISEAGKISYAMAFGDW------NKNNIKNIA 56 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGC 124 L N F+++ A K S D+ + E +E V+ +GD Sbjct: 57 SELASNSFELIHVPA----------SRKDSADMSMVAHGVELIFQYPHIESYVLITGDAD 106 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 F L+ +L++ K+ I+ + AS+ L AD ++D + Sbjct: 107 FRPLLLSLRKYGKQTLIICD---VKNNASEDLLNMADKYLDYREI 148 >gi|258649060|ref|ZP_05736529.1| conserved hypothetical protein [Prevotella tannerae ATCC 51259] gi|260850689|gb|EEX70558.1| conserved hypothetical protein [Prevotella tannerae ATCC 51259] Length = 208 Score = 65.0 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 24/148 (16%), Positives = 46/148 (31%), Gaps = 30/148 (20%) Query: 34 LKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKR 93 + S I Y +++ + F A + E Sbjct: 1 MSFISSYGNPIVQRIYADWTKPAMKRWKEV--------AKTFSFRLVEAISYIE------ 46 Query: 94 VKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151 VK++ D+ L +DA + ++ I S D + L ++ + V + S+ Sbjct: 47 VKNTTDMALVIDAMDLLHGKTVQGFCIISSDSDYALLAQRIREEGLLVLGYGEQKTPASL 106 Query: 152 --ASDQLR------------RQADYFMD 165 +S + R DYF+D Sbjct: 107 QNSSHEFRFSDKTEPVQPNNNTPDYFID 134 >gi|289580394|ref|YP_003478860.1| hypothetical protein Nmag_0713 [Natrialba magadii ATCC 43099] gi|289529947|gb|ADD04298.1| protein of unknown function DUF88 [Natrialba magadii ATCC 43099] Length = 154 Score = 65.0 bits (157), Expect = 5e-09, Method: Composition-based stats. Identities = 35/161 (21%), Positives = 55/161 (34%), Gaps = 31/161 (19%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 + LF+DG N++ FD+D L V Y L+ Sbjct: 21 VGLFVDGPNVF----RDEFDVDLDDLRDVAGGLGRVGVIRLYL--------DEHATPGLI 68 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCF 125 GF+VV +DV+LAVDA S + ++ L I S D F Sbjct: 69 QAAEARGFEVVI--------------TSGDVDVKLAVDATALSTDQTIDTLAIASRDTDF 114 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 ++ + + ++ SD L+ AD + L Sbjct: 115 KPVLEHAAAQGIETIAIAPGSHGR---SDALQNAADEAITL 152 >gi|291526127|emb|CBK91714.1| Protein of unknown function DUF88 [Eubacterium rectale DSM 17629] Length = 189 Score = 64.7 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 64/164 (39%), Gaps = 27/164 (16%) Query: 5 REKI--ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 R+K+ ALFIDG N+ SSK ++ K + ++ Y + + +S Sbjct: 50 RKKVNAALFIDGENI--SSKKA------EQIQKIANKQGVLGTEKVYGLQKDECTKSWSD 101 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 LD ++ K+ +N +K V + ++ ++ + I + D Sbjct: 102 KAKKLDIKD---IRLCGNPEKDKVDNKIKKDVNQE---------IKNNKSVDVVCIATSD 149 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 +T V L+R+ KKV + + +LR F ++ Sbjct: 150 KGYTDTVKELRRQGKKVVGIGEKKAPK-----ELRDACSEFFEI 188 >gi|304315197|ref|YP_003850344.1| hypothetical protein MTBMA_c14520 [Methanothermobacter marburgensis str. Marburg] gi|302588656|gb|ADL59031.1| conserved hypothetical protein [Methanothermobacter marburgensis str. Marburg] Length = 157 Score = 64.7 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 59/166 (35%), Gaps = 32/166 (19%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 + ++ + L +DG N+ K D+D+ K L R + Sbjct: 17 EDKKNLGLLVDGPNMLR--KEFCSDLDFVKNL--LVDRGNLRVGKV--------LLNQYA 64 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFS 120 L++ + GF + V +DV+LAV+AFE ++ + + + Sbjct: 65 SDKLIEAVVNQGFSPMI--------------VAGDVDVQLAVEAFELIHNPHIDVVALMT 110 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 + F L+ + K+ ++ S L+ AD + L Sbjct: 111 RNADFLPLINIAKENGKETLVIGAEPGF----SIALQNSADDSIKL 152 >gi|257053809|ref|YP_003131642.1| protein of unknown function DUF88 [Halorhabdus utahensis DSM 12940] gi|256692572|gb|ACV12909.1| protein of unknown function DUF88 [Halorhabdus utahensis DSM 12940] Length = 148 Score = 64.7 bits (156), Expect = 6e-09, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 50/162 (30%), Gaps = 31/162 (19%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 + L++DG N+ FD+D L + A Y L+ Sbjct: 15 VGLYVDGPNV----LREEFDVDLDDLRAIATEYGRIGAARLYL--------DEHATPGLI 62 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCF 125 GF VV +DV+LAVDA + +E LVI S D F Sbjct: 63 QAGEARGFAVVT--------------TSGDVDVKLAVDATRAASEARIETLVIASRDTDF 108 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 + + + ++ SD L A L Sbjct: 109 KPALEVAADRGCRTVAIAPGEHGR---SDALSNTAHESHSLE 147 >gi|302690852|ref|XP_003035105.1| hypothetical protein SCHCODRAFT_105532 [Schizophyllum commune H4-8] gi|300108801|gb|EFJ00203.1| hypothetical protein SCHCODRAFT_105532 [Schizophyllum commune H4-8] Length = 500 Score = 64.3 bits (155), Expect = 6e-09, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 56/167 (33%), Gaps = 20/167 (11%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP--EQ 58 MF EK+A+F D N ++ G+D+ + + + Y Sbjct: 1 MFRSSEKVAVFWDYENCAPPAQVSGYDV-VDTIRGIGHRYGAICQLKAYLEPPRQYVDPS 59 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEH 115 + L L L +G + +K D + VD + Sbjct: 60 GTARLLALRTELQASGVSLTDCP---------HNGMKEVADHMMQVDMLAFALDHPAPAT 110 Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162 +++ +GD F A L+ + +V I+S + L+ QAD Sbjct: 111 VILITGDRDFAYATAVLRARRYRVIILSL-----PHIHETLKAQADE 152 >gi|144575162|gb|AAZ43949.2| conserved hypothetical protein [Mycoplasma synoviae 53] Length = 385 Score = 64.3 bits (155), Expect = 7e-09, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 57/153 (37%), Gaps = 29/153 (18%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M + R IAL ID N Y S K+ L+K + R + A T+ +F Sbjct: 1 MLNQRPNIALIIDYEN-YKSEKS------IISLIKGLKFRGNLAIAKLITSDKSQINNKF 53 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVI 118 ++ +++ + KS+ D L ++ + + ++ I Sbjct: 54 --------------HELEIVYQQKYIDG------KSTADPRLIIETMQILYEKDIDIFCI 93 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151 + D F L+ L+ K K V + ++ P + Sbjct: 94 ATSDSDFVYLLQKLKSKNKYVILACESVASPWL 126 >gi|71894552|ref|YP_278660.1| hypothetical protein MS53_0541 [Mycoplasma synoviae 53] Length = 391 Score = 64.3 bits (155), Expect = 7e-09, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 57/153 (37%), Gaps = 29/153 (18%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M + R IAL ID N Y S K+ L+K + R + A T+ +F Sbjct: 7 MLNQRPNIALIIDYEN-YKSEKS------IISLIKGLKFRGNLAIAKLITSDKSQINNKF 59 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVI 118 ++ +++ + KS+ D L ++ + + ++ I Sbjct: 60 --------------HELEIVYQQKYIDG------KSTADPRLIIETMQILYEKDIDIFCI 99 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151 + D F L+ L+ K K V + ++ P + Sbjct: 100 ATSDSDFVYLLQKLKSKNKYVILACESVASPWL 132 >gi|298531231|ref|ZP_07018631.1| conserved hypothetical protein [Desulfonatronospira thiodismutans ASO3-1] gi|298508841|gb|EFI32747.1| conserved hypothetical protein [Desulfonatronospira thiodismutans ASO3-1] Length = 214 Score = 64.3 bits (155), Expect = 7e-09, Method: Composition-based stats. Identities = 33/188 (17%), Positives = 60/188 (31%), Gaps = 28/188 (14%) Query: 4 PREKIALFIDGANLYASSKALGFD-------IDYRKLLKAFRSRA-------IVIRAYYY 49 P +KI +DG NLY S + G +D + L + + YY+ Sbjct: 2 PTKKITYLVDGFNLYHSVRKAGKQLKASTKWLDLKSLCISMIHNFKPKADKLELENIYYF 61 Query: 50 TTVVG--DPEQQFSPLHPLLDWLHYNGFQVVAKVAKE------FTENCGRKRVKSSMDVE 101 + + L+ L G +V K F K + DV Sbjct: 62 SAYAYHLNDPDMVQRHKSLVACLEDTGVKVEINRFKYKAIDCPFCNKTIPKYEEKETDVS 121 Query: 102 LAVDAFE--QSEGLEHLVIFSGDGCFTTLVA-ALQRKVKKVTIVSTVLSDPSMASDQLRR 158 +A+ E + + ++ SGD V A++ K T + + +L + Sbjct: 122 IALKLQEIFIKDECDVAILVSGDTDLAPAVRLAIKLFPAKHTFFAFPAFRKNN---ELAK 178 Query: 159 QADYFMDL 166 + + Sbjct: 179 LCSGSITI 186 >gi|238924719|ref|YP_002938235.1| hypothetical protein EUBREC_2370 [Eubacterium rectale ATCC 33656] gi|238876394|gb|ACR76101.1| Hypothetical protein EUBREC_2370 [Eubacterium rectale ATCC 33656] Length = 191 Score = 64.3 bits (155), Expect = 7e-09, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 64/164 (39%), Gaps = 27/164 (16%) Query: 5 REKI--ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 R+K+ ALFIDG N+ SSK ++ K + ++ Y + + +S Sbjct: 52 RKKVNAALFIDGENI--SSKKA------EQIQKIANKQGVLGTEKVYGLQKDECTKSWSD 103 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 LD ++ K+ +N +K V + ++ ++ + I + D Sbjct: 104 KAKKLDIKD---IRLCGNPEKDKVDNKIKKDVNQE---------IKNNKSVDVVCIATSD 151 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 +T V L+R+ KKV + + +LR F ++ Sbjct: 152 KGYTDTVKELRRQGKKVVGIGEKKAPK-----ELRDACSEFFEI 190 >gi|254415491|ref|ZP_05029251.1| hypothetical protein MC7420_4949 [Microcoleus chthonoplastes PCC 7420] gi|196177672|gb|EDX72676.1| hypothetical protein MC7420_4949 [Microcoleus chthonoplastes PCC 7420] Length = 265 Score = 63.9 bits (154), Expect = 9e-09, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 51/161 (31%), Gaps = 20/161 (12%) Query: 16 NLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGF 75 NLY + + LL +++ ++ Y Q L GF Sbjct: 17 NLYWDLQNVSIQKSAHLLLSFAQTQGHLLAQNVYYN------SQCQNQAQAKKPLSRLGF 70 Query: 76 QVVA--KVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQ 133 K+ ++ + + + D +++ SGDG F LV LQ Sbjct: 71 DCRDVPCPLKDSADHQLIAHCLKDIHSDRSPDI---------IILVSGDGDFCPLVRNLQ 121 Query: 134 RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 KKV I + + + L + D F + L + Sbjct: 122 SLDKKVIIFAQLGNVKQKL-KDLVQ--DDFYFVDQLPKLVQ 159 >gi|254417369|ref|ZP_05031111.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC 7420] gi|196175804|gb|EDX70826.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC 7420] Length = 302 Score = 63.9 bits (154), Expect = 9e-09, Method: Composition-based stats. Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 5/86 (5%) Query: 7 KIALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 ++A+FID AN+Y S+ LGFD DY LL + + +A++YT + QQ Sbjct: 187 RVAIFIDAANIYHSALQLGFDPPDYADLLAFLKRQYSSYQAFFYTGLDSTNRQQ----KR 242 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGR 91 LL L G+++++K + + + Sbjct: 243 LLFRLQNLGYKIISKEIIKRADGSCK 268 >gi|294628827|ref|ZP_06707387.1| conserved hypothetical protein [Streptomyces sp. e14] gi|292832160|gb|EFF90509.1| conserved hypothetical protein [Streptomyces sp. e14] Length = 408 Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats. Identities = 22/175 (12%), Positives = 53/175 (30%), Gaps = 26/175 (14%) Query: 5 REKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSR------AIVIRAYYYT 50 ++ + +D L ++ +D+ L++ R + ++R Y++ Sbjct: 1 MDRCIVLVDAGYLLGAAASLLAGEPSRSRITVDHSALVQQLREQAESDTERPLLRIYWFD 60 Query: 51 TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110 Q V + + +D + + E + Sbjct: 61 GAPDRVPQ---------PEHRRLRVMPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELA 111 Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162 +V+ +GDG + A + V + + +D S+ L +AD Sbjct: 112 RNRACSDVVLVTGDGDLLPGMMAAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 166 >gi|332667285|ref|YP_004450073.1| hypothetical protein Halhy_5375 [Haliscomenobacter hydrossis DSM 1100] gi|332336099|gb|AEE53200.1| protein of unknown function DUF88 [Haliscomenobacter hydrossis DSM 1100] Length = 315 Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 63/185 (34%), Gaps = 36/185 (19%) Query: 7 KIALFIDG------ANLYASSKALGFDIDYRKLLKAFRS-----------RAIVIRAYYY 49 +I +F DG +N Y I R L R R +I A+Y+ Sbjct: 13 RIGVFYDGHYFLQVSNYYNYVHDRRSRISIRGLHDFVRKQVAIEEDEEFHRCQIIDAHYF 72 Query: 50 TTVVGDPEQQFS-----PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAV 104 + E D L G V + F + + +DV LA+ Sbjct: 73 RGRLSASEASQRGNLLYFERAFDDILMSEGVSVHYLPVRNFHG----RWQEKGIDVWLAL 128 Query: 105 DAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS--------TVLSDPSMASD 154 +AFE + + + +VI + DG ++ LV L +V ++ + S+ Sbjct: 129 EAFEMTFYKRFDVVVILAADGDYSPLVRKLHSLGSRVMLLHWNFEYTDEEGNRFSTRTSN 188 Query: 155 QLRRQ 159 +L Sbjct: 189 ELVSS 193 >gi|328881764|emb|CCA55003.1| hypothetical protein SVEN_1716 [Streptomyces venezuelae ATCC 10712] Length = 447 Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 22/175 (12%), Positives = 53/175 (30%), Gaps = 26/175 (14%) Query: 5 REKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSRAI------VIRAYYYT 50 ++ + +D L ++ +D+ L++ RA ++R Y++ Sbjct: 1 MDRCVVLVDAGYLLGAAASLLAGEPARSRITVDHAGLIQQLSQRAEAETALPLLRIYWFD 60 Query: 51 TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110 Q V + + +D + + E + Sbjct: 61 GAPDRVPQ---------PEHRRLRVMPRVTVRLGALTRSDGRWAQKGVDAAMHTELTELA 111 Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162 +V+ +GDG + + + V + + +D S+ L +AD Sbjct: 112 RNRACSDIVLVTGDGDLLPGLMSAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 166 >gi|297161308|gb|ADI11020.1| hypothetical protein SBI_07900 [Streptomyces bingchenggensis BCW-1] Length = 457 Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 23/175 (13%), Positives = 54/175 (30%), Gaps = 26/175 (14%) Query: 5 REKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSRAI------VIRAYYYT 50 ++ + +D L ++ +D+ L++ R RA ++R Y++ Sbjct: 1 MDRCVVLVDAGYLLGAAASLLAGEPARSRISVDHATLIQGLRERAEAETERPLLRIYWFD 60 Query: 51 TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110 Q V + + +D + + E + Sbjct: 61 GAPDRVPQ---------PEHRRLRVMPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELA 111 Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162 +V+ +GDG + + + V + + +D S+ L +AD Sbjct: 112 RNRACSDIVLVTGDGDLLPGLMSAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 166 >gi|21220543|ref|NP_626322.1| hypothetical protein SCO2062 [Streptomyces coelicolor A3(2)] gi|256788319|ref|ZP_05526750.1| hypothetical protein SlivT_27854 [Streptomyces lividans TK24] gi|5596807|emb|CAB51454.1| hypothetical protein [Streptomyces coelicolor A3(2)] Length = 403 Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 24/175 (13%), Positives = 54/175 (30%), Gaps = 26/175 (14%) Query: 5 REKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSRAI------VIRAYYYT 50 ++ + +D L ++ +D+ L++ R RA ++R Y++ Sbjct: 1 MDRCIVLVDAGYLLGAAASLLAGEPSRSRITVDHAALIQGLRDRAESDTQQPLLRIYWFD 60 Query: 51 TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110 Q V + + +D + + E + Sbjct: 61 GAPDRVPQ---------PEHRRLRVMPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELA 111 Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162 +V+ +GDG + A + V + + +D S+ L +AD Sbjct: 112 RNRACSDVVLVTGDGDLLPGMMAAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 166 >gi|239978948|ref|ZP_04701472.1| hypothetical protein SalbJ_05917 [Streptomyces albus J1074] Length = 409 Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 23/175 (13%), Positives = 52/175 (29%), Gaps = 26/175 (14%) Query: 5 REKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSRAI------VIRAYYYT 50 ++ + +D L ++ +D+ L++ R RA ++R Y++ Sbjct: 1 MDRCVVLVDAGYLLGAAASLLAGDPSRSRISVDHATLVRQLRERAEAETAQPLLRIYWFD 60 Query: 51 TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110 Q V + + +D + + E + Sbjct: 61 GAPDRVPQ---------PEHRRLRVMPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELA 111 Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVST-VLSDPSMASDQLRRQADY 162 +V+ +GDG + A + V + + S+ L +AD Sbjct: 112 RNKACSDIVLVTGDGDLLPGMTAAKEHGVAVHLWAVQAAGGDYNQSEDLVAEADE 166 >gi|15679075|ref|NP_276192.1| hypothetical protein MTH1064 [Methanothermobacter thermautotrophicus str. Delta H] gi|2622162|gb|AAB85553.1| conserved protein [Methanothermobacter thermautotrophicus str. Delta H] Length = 155 Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 56/164 (34%), Gaps = 32/164 (19%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 ++ + L +DG N+ F D + R + VG Sbjct: 17 KKSLGLLVDGPNM----LRKEFCSDLEFVKNLLFDRGNL--------KVGKVLLNQYASD 64 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGD 122 L++ + GF + V +DV+LAV+AFE ++ + I + + Sbjct: 65 KLIEAVVNQGFSPMI--------------VAGDVDVQLAVEAFELIHNPNIDVVAIMTRN 110 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 F L+ + K+ ++ S L+ AD + L Sbjct: 111 ADFLPLINIAKENGKETLVIGAEPGF----SIALQNSADDSIIL 150 >gi|242398802|ref|YP_002994226.1| hypothetical protein TSIB_0816 [Thermococcus sibiricus MM 739] gi|242265195|gb|ACS89877.1| hypothetical protein TSIB_0816 [Thermococcus sibiricus MM 739] Length = 153 Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 60/169 (35%), Gaps = 34/169 (20%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M D +I L I+G N+ S FDI +L A ++ Sbjct: 1 MEDKYPQIGLVINGPNILLS----KFDISLEDILYALNDIGRIVVGKV------------ 44 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRK-RVKSSMDVELAVDAFE--QSEGLEHLV 117 ++ + + K ++ V +DV +AV+ + + + L Sbjct: 45 -----------VINYEFSSNLLKSIIDSGLESVMVNGRVDVAVAVEGMKIIYNPRINVLA 93 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 + + D F LV +R K V +++ S+ L+ AD ++L Sbjct: 94 LATRDAHFMPLVFEAKRMGKDVIVIA----PEKKVSEALQNIADKTIEL 138 >gi|295839453|ref|ZP_06826386.1| conserved hypothetical protein [Streptomyces sp. SPB74] gi|197698733|gb|EDY45666.1| conserved hypothetical protein [Streptomyces sp. SPB74] Length = 420 Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 23/175 (13%), Positives = 55/175 (31%), Gaps = 26/175 (14%) Query: 5 REKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSRAI------VIRAYYYT 50 ++ + +D L ++ +D+ L++ R RA ++R Y++ Sbjct: 1 MDRCVVLVDAGYLLGAAASLLAGDPSRSRITVDHAALIQRLRERAEEETGQPLLRIYWFD 60 Query: 51 TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110 Q + V + + +D + + E + Sbjct: 61 GAPDRVPQ---------PEHRRLRVRPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELA 111 Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162 +V+ +GDG + + + V + + +D S+ L +AD Sbjct: 112 RNRACSDVVLVTGDGDLLPGLVSAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 166 >gi|222479667|ref|YP_002565904.1| protein of unknown function DUF88 [Halorubrum lacusprofundi ATCC 49239] gi|222452569|gb|ACM56834.1| protein of unknown function DUF88 [Halorubrum lacusprofundi ATCC 49239] Length = 164 Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 55/165 (33%), Gaps = 31/165 (18%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +ALF+DG N+ FD+D + A + ++ Y L+ Sbjct: 13 VALFVDGPNV----LREEFDVDLDDVRIAAEAEGQLVTTRLYL--------DEHATPGLI 60 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCF 125 GF+VV +DV+LAVDA + + L I S D F Sbjct: 61 QAAEARGFEVVV--------------TSGDVDVKLAVDAARFAAEGRMSTLAIASRDTDF 106 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 +V + ++ SD LR + + L + Sbjct: 107 KPVVEIANSYGIRTLAIAPGEFGR---SDALRNATNDSVTLDGDR 148 >gi|218132405|ref|ZP_03461209.1| hypothetical protein BACPEC_00264 [Bacteroides pectinophilus ATCC 43243] gi|217992743|gb|EEC58745.1| hypothetical protein BACPEC_00264 [Bacteroides pectinophilus ATCC 43243] Length = 251 Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 26/197 (13%), Positives = 61/197 (30%), Gaps = 37/197 (18%) Query: 4 PREKIALFIDGANLYASS-KALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 + + A+F+D + + ++ + ++ ++ + + + P Sbjct: 8 SKPRAAVFVDYEHWFYGYHNNFHMRPNFEEWIQELKNEYDIDELHVFGDFSERQIGAELP 67 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG---LEHLVIF 119 + + T + K DV + + + + V+F Sbjct: 68 ELQRITNNN-----------VTHTASDKLGVDKDFTDVIILDHIYRSAAKKKSADVYVLF 116 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD-------------- 165 +GD FT +V L+ KKV I S+ L+ A +++ Sbjct: 117 TGDAHFTCVVDYLKELNKKVVIYGVKFGF----SNALKSAATSYVEMPRQIQVKNHYNDL 172 Query: 166 ----LAYLKNEIARDPD 178 L L+ + + P Sbjct: 173 ILASLDKLRRKPGKTPS 189 >gi|322368949|ref|ZP_08043516.1| hypothetical protein ZOD2009_05667 [Haladaptatus paucihalophilus DX253] gi|320551680|gb|EFW93327.1| hypothetical protein ZOD2009_05667 [Haladaptatus paucihalophilus DX253] Length = 160 Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 32/163 (19%), Positives = 53/163 (32%), Gaps = 31/163 (19%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +ALF+DG N+ + + A R + Y L+ Sbjct: 20 VALFVDGPNVLRDDFDVDL----DDVRTAGRQLGQLATTRLYL--------DEHATPGLI 67 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCF 125 GF+VV +DV+LA+DA E + E ++ L I S D F Sbjct: 68 QAAEARGFEVVI--------------TSGDVDVKLAIDATELALDERVDVLAIASRDTDF 113 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 ++ R + ++ SD L+ A + Sbjct: 114 KPVLEKAARNGVRTVAIAPGEYGR---SDALQNAAHEAFVIED 153 >gi|186681791|ref|YP_001864987.1| hypothetical protein Npun_R1332 [Nostoc punctiforme PCC 73102] gi|186464243|gb|ACC80044.1| protein of unknown function DUF88 [Nostoc punctiforme PCC 73102] Length = 283 Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 56/180 (31%), Gaps = 31/180 (17%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 + +F D N+ F LL+ +S+ + Y + Sbjct: 37 VGIFADIQNVSLIKGKGHF------LLEFAQSKGRIDCKNVYYN------SHYINQVCTK 84 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVD---AFEQSEGLEHLVIFSGDGC 124 + L G + V +S D L D A + L +++ SGD Sbjct: 85 NELEILGIKCVDVP----------DHSNNSADYRLMADCVKAVAFNPSLTTIILLSGDWD 134 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA--DYFMDLAYLKNEIARDPDEDKK 182 + L+ L+ KKV I + S +L + D F + L +A + Sbjct: 135 YAGLICILKSLGKKVKIFA----QRGSESPKLIKLVGNDNFHFVDELPQLVANTNKTQPQ 190 >gi|78189938|ref|YP_380276.1| cold shock protein [Chlorobium chlorochromatii CaD3] gi|78172137|gb|ABB29233.1| Cold shock protein [Chlorobium chlorochromatii CaD3] Length = 310 Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 34/171 (19%), Positives = 60/171 (35%), Gaps = 31/171 (18%) Query: 1 MFDPRE----KIALFIDGANLYASSKALGF------DIDYRKLLKAFRSR---------- 40 M + R+ +I +F DG S + I L R+ Sbjct: 1 MVNNRDLSLTRIGVFYDGNYFLHISNYYNYFHERKARISISGLHHFVRNYIAQQEGSDEQ 60 Query: 41 -AIVIRAYYYTTVVGDPEQQFS-----PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRV 94 ++ A+Y+ + E D L G K + R Sbjct: 61 LCQIVDAHYFRGRLNAYEAAQEGNALFYDRLFDDILSSEGVTTHYLPVKT---SQTGVRY 117 Query: 95 KSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS 143 + +DV LA++AFEQ+ + + LV+ + DG + L+ L +V ++S Sbjct: 118 EKGIDVWLALEAFEQAFYKRFDVLVLIASDGDYVPLIRKLNTLGTRVMVLS 168 >gi|126734452|ref|ZP_01750199.1| hypothetical protein RCCS2_09834 [Roseobacter sp. CCS2] gi|126717318|gb|EBA14182.1| hypothetical protein RCCS2_09834 [Roseobacter sp. CCS2] Length = 213 Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 27/176 (15%), Positives = 50/176 (28%), Gaps = 24/176 (13%) Query: 7 KIALFIDGANLYASSKALGF--DIDYRKLLKAFRSRAIVIRAYYY----TTVVGDPEQQF 60 ++ +++DG NLY D + L VI Y + Sbjct: 2 RVRVYVDGFNLYYRLLKHSRYKWTDLKLLSSELLQTGDVIERIRYFTADVSPRAGDPDAP 61 Query: 61 SPLHPLLDWLHYNG----------FQVVAKVA--KEFTENCGRKRVKSSMDVELAVDAFE 108 + L + + + +E + R + DV LA Sbjct: 62 TRQQAYFRALRTIPELEIHKGTFLAKTIHRPVRGQEESYVYVRDTEEKGSDVNLASHLLM 121 Query: 109 --QSEGLEHLVIFSGDGCFTTLVAAL-QRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 + + ++ S D + + Q K V + + P S LR+ A Sbjct: 122 DGFCDTYDIALVMSQDTDLLEPIRMVSQELGKVVIVAWFEDTSP---SKLLRQYAT 174 >gi|302518506|ref|ZP_07270848.1| conserved hypothetical protein [Streptomyces sp. SPB78] gi|302427401|gb|EFK99216.1| conserved hypothetical protein [Streptomyces sp. SPB78] Length = 457 Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 23/174 (13%), Positives = 55/174 (31%), Gaps = 26/174 (14%) Query: 6 EKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSRAI------VIRAYYYTT 51 ++ + +D L ++ +D+ L++ R RA ++R Y++ Sbjct: 136 DRCVVLVDAGYLLGAAASLLAGDPSRSRITVDHAALIQRLRERAEEETGQPLLRIYWFDG 195 Query: 52 VVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE 111 Q + V + + +D + + E + Sbjct: 196 APDRVPQ---------PEHRRLRVRPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELAR 246 Query: 112 G--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162 +V+ +GDG + + + V + + +D S+ L +AD Sbjct: 247 NRACSDIVLVTGDGDLLPGLVSAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 300 >gi|302546171|ref|ZP_07298513.1| conserved hypothetical protein [Streptomyces hygroscopicus ATCC 53653] gi|302463789|gb|EFL26882.1| conserved hypothetical protein [Streptomyces himastatinicus ATCC 53653] Length = 435 Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 23/175 (13%), Positives = 54/175 (30%), Gaps = 26/175 (14%) Query: 5 REKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSRAI------VIRAYYYT 50 ++ + +D L ++ +D+ L++ R RA ++R Y++ Sbjct: 1 MDRCVVLVDAGYLLGAAASLLAGEPARSRISVDHATLIQGLRERAEAETERPLLRIYWFD 60 Query: 51 TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110 Q V + + +D + + E + Sbjct: 61 GAPDRVPQ---------PEHRRLRVMPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELA 111 Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162 +V+ +GDG + + + V + + +D S+ L +AD Sbjct: 112 RNRACSDIVLVTGDGDLLPGLMSAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 166 >gi|325186423|emb|CCA20928.1| conserved hypothetical protein [Albugo laibachii Nc14] Length = 304 Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 61/178 (34%), Gaps = 15/178 (8%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAI-VIRAYYYTTVVGDPEQQFSPLHPL 66 AL IDGA + + G +DY KL K + IR +Y T Sbjct: 11 TALIIDGAYAEINGQKKG-GLDYLKLRKFLEEKGKAQIRERWYFTHDRRKYTTSFFTMIK 69 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKR------VKSSMDVELAVDAFEQSEG--LEHLVI 118 FQ+ K + C R V+ +D +A + + ++ Sbjct: 70 SAPPLGPQFQLKVYGTKSYACRCKRCHYRFSQFVQKGVDNGIATKLLSLAYENVCDRFIL 129 Query: 119 FSGDGCFTTLVAALQR-KVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 +GDG F + ++ K++ +V S S L++ A + L + R Sbjct: 130 LAGDGDFYDSLYQVKNVLRKEIWVVGFRDSV----SADLQQLASMIIWLDDHWQGVQR 183 >gi|297194912|ref|ZP_06912310.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC 25486] gi|197723066|gb|EDY66974.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC 25486] Length = 427 Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 24/194 (12%), Positives = 58/194 (29%), Gaps = 28/194 (14%) Query: 5 REKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRS------RAIVIRAYYYT 50 ++ + +D L ++ +D+ L++ R + ++R Y++ Sbjct: 1 MDRCVVLVDAGYLLGAAASLLAGEPARSRITVDHASLIQGLRELAEADTQRPLLRIYWFD 60 Query: 51 TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110 Q V + + +D + + E + Sbjct: 61 GAPDRVPQ---------PEHRRLRVMPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELA 111 Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADYFMDLA 167 +V+ +GDG + + + V + + +D S+ L +AD L Sbjct: 112 RNRACSDVVLVTGDGDLLPGLMSAKEHGVAVHLWAVQAADGDYNQSEDLVAEADERRVLD 171 Query: 168 YLKNEIARDPDEDK 181 + I R + Sbjct: 172 --RAWITRAVRAKE 183 >gi|239931834|ref|ZP_04688787.1| hypothetical protein SghaA1_26677 [Streptomyces ghanaensis ATCC 14672] gi|291440202|ref|ZP_06579592.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] gi|291343097|gb|EFE70053.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] Length = 403 Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 24/175 (13%), Positives = 54/175 (30%), Gaps = 26/175 (14%) Query: 5 REKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSRAI------VIRAYYYT 50 ++ + +D L ++ +D+ L++ R RA ++R Y++ Sbjct: 1 MDRCIVLVDAGYLLGAAASLLAGEPSRSRITVDHAALIQGLRERAESDTRQPLLRIYWFD 60 Query: 51 TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110 Q V + + +D + + E + Sbjct: 61 GAPDRVPQ---------PEHRRLRVMPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELA 111 Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162 +V+ +GDG + A + V + + +D S+ L +AD Sbjct: 112 RNRACSDIVLVTGDGDLLPGMMAAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 166 >gi|327403774|ref|YP_004344612.1| hypothetical protein Fluta_1784 [Fluviicola taffensis DSM 16823] gi|327319282|gb|AEA43774.1| hypothetical protein Fluta_1784 [Fluviicola taffensis DSM 16823] Length = 209 Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 32/179 (17%), Positives = 62/179 (34%), Gaps = 25/179 (13%) Query: 7 KIALFIDGANLYASSKALGFD-------IDYRKLLKAFRSR----AIVIRAYYYTTVV-- 53 K++ IDG NLY S + L + +D + LL ++ A + +Y+T + Sbjct: 2 KVSFLIDGFNLYHSIEDLEKNNGIKAKWLDIKTLLHSYMGAIGGTAKFEKIFYFTALRLH 61 Query: 54 --GDPEQQFSPLHPLLDWLHYNGFQVVA---KVAKEFT---ENCGRKRVKSSMDVELAVD 105 + + L G + + K + F + DV +A Sbjct: 62 VQKEKPNSIERHKRYIAALETKGIEAIYGGFKPKEVFCKKCNETFETFEEKKTDVAIASK 121 Query: 106 AFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162 E + + + I SGD + ++ K+ I+ +D+L+ D Sbjct: 122 IIELAAKAMCDVIAIVSGDTDLIPAIELAKQINPKIKIIVF--FPYKRTNDELKIYTDQ 178 >gi|218780432|ref|YP_002431750.1| hypothetical protein Dalk_2589 [Desulfatibacillum alkenivorans AK-01] gi|218761816|gb|ACL04282.1| conserved hypothetical protein [Desulfatibacillum alkenivorans AK-01] Length = 207 Score = 62.7 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 27/180 (15%), Positives = 63/180 (35%), Gaps = 24/180 (13%) Query: 7 KIALFIDGANLYASSKA--LGFDIDYRKLLK-AFRSRAIVIRAYYYTTVVGDPEQQFS-- 61 + +++IDG NLY + +D ++L + + ++ Y+T +V Sbjct: 2 RTSVYIDGFNLYYRALRGTPYKWLDLKQLAANLLQPKHVITEIKYFTAIVSGIFDPRQPI 61 Query: 62 PLHPLLDWLHYNGFQVVAK---------------VAKEFTENCGRKRVKSSMDVELAVDA 106 + L +V +A+ + K + DV LAV Sbjct: 62 RQKTYIRALESYIPEVSVHYGHFLSHTVSLPQSPLAQPPSFAKVIKTEEKGSDVNLAVHL 121 Query: 107 FEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 + + + ++ S D + ++ + K+ + S +L++ A +F+ Sbjct: 122 LNDAWLDKYDCAIVISNDSDLAEPLRLIREQNGKLLGL-LSPLVQGHPSQELQKHA-HFV 179 >gi|297199039|ref|ZP_06916436.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] gi|297147270|gb|EFH28556.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] Length = 406 Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 23/175 (13%), Positives = 53/175 (30%), Gaps = 26/175 (14%) Query: 5 REKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSR------AIVIRAYYYT 50 ++ + +D L ++ +D+ L++ R R ++R Y++ Sbjct: 1 MDRCIVLVDAGYLLGAAASLLAGEPSRSRITVDHAALVQGLRDRAESDTERPLLRIYWFD 60 Query: 51 TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110 Q V + + +D + + E + Sbjct: 61 GAPDRVPQ---------PEHRRLRVMPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELA 111 Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162 +V+ +GDG + A + V + + +D S+ L +AD Sbjct: 112 RNRACSDIVLVTGDGDLLPGMMAAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 166 >gi|325290777|ref|YP_004266958.1| protein of unknown function DUF88 [Syntrophobotulus glycolicus DSM 8271] gi|324966178|gb|ADY56957.1| protein of unknown function DUF88 [Syntrophobotulus glycolicus DSM 8271] Length = 274 Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 30/176 (17%), Positives = 60/176 (34%), Gaps = 25/176 (14%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA-----IVIRAYYYTTVVGDPEQQ 59 + +A FID N++ G I ++A A + + Y + + Sbjct: 1 MKAVA-FIDYENIWTGLAEKGCRIMPEVFIEALHKYAQSIDVELSVIFLYANFDKEEFWR 59 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS----EGLEH 115 + ++ + + ++ D EL ++A E + + Sbjct: 60 MQTVF--------EKKSIITRHVYGKNSFAQTELRPNAADHELMLEAQEILLTRPDSFDI 111 Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA---DYFMDLAY 168 ++F+GDG F +LV ++ KKV I+ L D F++L Sbjct: 112 FLLFTGDGDFMSLVRKIRAWGKKVKII----GVKGKIHHDLEPFCESMDVFLELTK 163 >gi|220935117|ref|YP_002514016.1| hypothetical protein Tgr7_1948 [Thioalkalivibrio sp. HL-EbGR7] gi|219996427|gb|ACL73029.1| hypothetical protein Tgr7_1948 [Thioalkalivibrio sp. HL-EbGR7] Length = 199 Score = 62.3 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 24/163 (14%), Positives = 48/163 (29%), Gaps = 17/163 (10%) Query: 5 REKIALFIDGANLYASSKALG----FDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 + + +F+D NL+ G + +D+ +LL A A + + + Sbjct: 28 NDSVHVFVDDQNLFWGVLNSGQSRGYRVDFGRLLTAASRDASGKTRFVKSAYIAGVIPDD 87 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLE---HLV 117 GF V + + G + D L + + +V Sbjct: 88 DS---FWKIAENQGFTVR----RGYLSGAGGGQRSKQDDAYLITEITSTLYEHQGPSTIV 140 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS---MASDQLR 157 + +GD + + K +V + S S R Sbjct: 141 LVAGDADYVPPLIRANEKGWRVEVAFIDRGLSSALDAVSHLFR 183 >gi|153809371|ref|ZP_01962039.1| hypothetical protein BACCAC_03685 [Bacteroides caccae ATCC 43185] gi|149127957|gb|EDM19179.1| hypothetical protein BACCAC_03685 [Bacteroides caccae ATCC 43185] Length = 192 Score = 62.3 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 37/114 (32%), Gaps = 16/114 (14%) Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVI 118 L D F++V + + K++ D+ L +DA + + + Sbjct: 7 KKLSGWKDAARDYSFRMV--------QASSFVQGKNTTDIALVMDAMDILHEGRVGCFCL 58 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 + DG +T L ++ V L R F+ LA K E Sbjct: 59 VASDGDYTLLAQRIRESGLMVLGYGEGK-----TPVALVRSCTGFL-LADRKEE 106 >gi|254382567|ref|ZP_04997925.1| conserved hypothetical protein [Streptomyces sp. Mg1] gi|194341470|gb|EDX22436.1| conserved hypothetical protein [Streptomyces sp. Mg1] Length = 431 Score = 62.3 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 23/175 (13%), Positives = 54/175 (30%), Gaps = 26/175 (14%) Query: 5 REKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSRAI------VIRAYYYT 50 ++ + +D L ++ +D+ L++ R RA ++R Y++ Sbjct: 1 MDRCVVLVDAGYLLGAAASLLAGEPSRSRITVDHAALIQGLRERAEADTEQPLLRIYWFD 60 Query: 51 TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110 Q V + + +D + + E + Sbjct: 61 GAPDRVPQ---------PEHRRLRVMPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELA 111 Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162 +V+ +GDG + + + V + + +D S+ L +AD Sbjct: 112 RNRACSDVVLVTGDGDLLPGLMSAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 166 >gi|320011309|gb|ADW06159.1| hypothetical protein Sfla_4758 [Streptomyces flavogriseus ATCC 33331] Length = 417 Score = 62.3 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 23/175 (13%), Positives = 54/175 (30%), Gaps = 26/175 (14%) Query: 5 REKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSRAI------VIRAYYYT 50 ++ + +D L ++ +D+ L++ R RA ++R Y++ Sbjct: 1 MDRCVVLVDAGYLLGAAASLLAGEPARSRITVDHTALIQGLRERAEADTEQPLLRIYWFD 60 Query: 51 TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110 Q V + + +D + + E + Sbjct: 61 GAPDRVPQ---------PEHRRLRVMPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELA 111 Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162 +V+ +GDG + + + V + + +D S+ L +AD Sbjct: 112 RNRACSDVVLVTGDGDLLPGLMSAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 166 >gi|51102980|gb|AAT96127.1| hypothetical protein [Pseudomonas viridiflava] Length = 186 Score = 62.3 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 28/195 (14%), Positives = 60/195 (30%), Gaps = 49/195 (25%) Query: 11 FIDGANLYASSKALG------------------------FDIDYRKLLKAFRSRAIVIRA 46 ++D +N++ + +++DY L + A I Sbjct: 11 YVDNSNVFLEGRRASAVAKKLLGAESYIEAMNNRILDNTWNLDYGLLHQFACGDAENIGG 70 Query: 47 YYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELA--- 103 + + GF+V + +DV +A Sbjct: 71 AKLWGSPPPSDS-------FWHMVESKGFEVKT-------YEKNFAGKEKKVDVAIAHQI 116 Query: 104 -VDAFE--QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160 DA+ S+G + + + +GD F +V L +V +V A+ +L+ Sbjct: 117 TKDAYSGKISKGTDEITLVAGDKDFVPVVEDLVENGYQVHVV-----FWENAAPELKVVC 171 Query: 161 DYFMDLAYLKNEIAR 175 F+ L + + + Sbjct: 172 SKFISLNPYLDNLTK 186 >gi|318057577|ref|ZP_07976300.1| hypothetical protein SSA3_06549 [Streptomyces sp. SA3_actG] Length = 436 Score = 61.6 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 23/174 (13%), Positives = 55/174 (31%), Gaps = 26/174 (14%) Query: 6 EKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSRAI------VIRAYYYTT 51 ++ + +D L ++ +D+ L++ R RA ++R Y++ Sbjct: 5 DRCVVLVDAGYLLGAAASLLAGDPSRSRITVDHAALIQRLRERAEEETGQPLLRIYWFDG 64 Query: 52 VVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE 111 Q + V + + +D + + E + Sbjct: 65 APDRVPQ---------PEHRRLRVRPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELAR 115 Query: 112 G--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162 +V+ +GDG + + + V + + +D S+ L +AD Sbjct: 116 NRACSDIVLVTGDGDLLPGLVSAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 169 >gi|163783250|ref|ZP_02178244.1| hypothetical protein HG1285_14539 [Hydrogenivirga sp. 128-5-R1-1] gi|159881584|gb|EDP75094.1| hypothetical protein HG1285_14539 [Hydrogenivirga sp. 128-5-R1-1] Length = 205 Score = 61.6 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 34/207 (16%), Positives = 71/207 (34%), Gaps = 39/207 (18%) Query: 5 REKIALFIDGANLYASSKALGFDI----------DYRKLL----KAFRSRAIVIRAYYYT 50 +K+A+ +D NL + + D KLL V R ++Y Sbjct: 1 MKKVAILVDWENLRKTLERAFKKFRISPDKFSYNDVDKLLLFIMSLLEEDEEVYRIFFYV 60 Query: 51 TVVG------------DPEQQFSPLH----PLLDWLHYNGFQVVAKVAKEFTENCGRK-- 92 + D ++++ ++ L+ L + K EF + Sbjct: 61 SEPPKEARWRSATYSIDMDEKYRKIYENAVTFLESLKTKDLVSIRKGKLEFRGYNSQNKP 120 Query: 93 -RVKSSMDVELAVDA--FEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDP 149 + +D+ + +D ++ +++FS D + + +V I + Sbjct: 121 LFTQKQVDMLIGLDMAHLSYLRLVDRVMVFSLDKDLIPALKIARVNGLQVIIPT--YKGL 178 Query: 150 SMASDQLRRQAD--YFMDLAYLKNEIA 174 AS +L+ AD ++DLA I+ Sbjct: 179 RQASPELQEHADFIRYVDLAERLRNIS 205 >gi|317132837|ref|YP_004092151.1| hypothetical protein Ethha_1898 [Ethanoligenens harbinense YUAN-3] gi|315470816|gb|ADU27420.1| hypothetical protein Ethha_1898 [Ethanoligenens harbinense YUAN-3] Length = 180 Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 38/191 (19%), Positives = 68/191 (35%), Gaps = 40/191 (20%) Query: 10 LFIDGANL-----YASSKALG-----------------FDIDYRKLLKAFRSRAI--VIR 45 +++D +N+ Y S+ G + D+ KLL + R Sbjct: 5 VYVDNSNVWIEGKYYSAVKKGMVANIFDAHENKICDMPWGYDFGKLLNISCEGDENSLKR 64 Query: 46 AYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVD 105 A Y + D + + + GF+V E KRV + D E+ D Sbjct: 65 AVLYGSKPTDNDSLW-------NAARRFGFEVYHP---ERNVKNKEKRVDTGFDKEVLKD 114 Query: 106 AF-EQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 + +++++ +GD + A+ + K T+V AS+ L+ A F+ Sbjct: 115 LYKSVIGHDDNIILVAGDADHVPVAEAIVEEGMKFTLV-----FWDNASETLKNMASKFI 169 Query: 165 DLAYLKNEIAR 175 L EI R Sbjct: 170 SLNNYIAEITR 180 >gi|149184904|ref|ZP_01863221.1| hypothetical protein ED21_17662 [Erythrobacter sp. SD-21] gi|148831015|gb|EDL49449.1| hypothetical protein ED21_17662 [Erythrobacter sp. SD-21] Length = 205 Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 47/141 (33%), Gaps = 19/141 (13%) Query: 11 FIDGANLYASSKAL----GFDIDYRKLLKAFRSRA----IVIRAYYYTTVVGDPEQQFSP 62 FIDG NL+ +K L + D L + A +R Y + Sbjct: 13 FIDGQNLFKQAKRLFGHREPNFDPVALHREVSRMAGFAPGPVRVYTGIPAANRQPRWHLF 72 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTEN---------CGRKRVKSSMDVELAVDAFEQSEG- 112 + + + G V + + + + +D+ +A+D + Sbjct: 73 WNNKIQAMKRAGVTVTTRPLRYRKRQLFDEDGEVETITQAEEKGIDIRIALDLVRMARRE 132 Query: 113 -LEHLVIFSGDGCFTTLVAAL 132 L+ +I+S D +V+ + Sbjct: 133 ELDAAIIYSQDQDLNEVVSEI 153 >gi|239987029|ref|ZP_04707693.1| hypothetical protein SrosN1_06957 [Streptomyces roseosporus NRRL 11379] Length = 417 Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 23/175 (13%), Positives = 54/175 (30%), Gaps = 26/175 (14%) Query: 5 REKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSRAI------VIRAYYYT 50 ++ + +D L ++ +D+ L++ R RA ++R Y++ Sbjct: 1 MDRCVVLVDAGYLLGAAASLLAGEPARSRITVDHAALIQGLRERAEADTQQPLLRIYWFD 60 Query: 51 TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110 Q V + + +D + + E + Sbjct: 61 GAPDRVPQ---------PEHRRLRVMPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELA 111 Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162 +V+ +GDG + + + V + + +D S+ L +AD Sbjct: 112 RNRACSDVVLVTGDGDLLPGLMSAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 166 >gi|302533928|ref|ZP_07286270.1| conserved hypothetical protein [Streptomyces sp. C] gi|302442823|gb|EFL14639.1| conserved hypothetical protein [Streptomyces sp. C] Length = 425 Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 23/175 (13%), Positives = 54/175 (30%), Gaps = 26/175 (14%) Query: 5 REKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSRAI------VIRAYYYT 50 ++ + +D L ++ +D+ L++ R RA ++R Y++ Sbjct: 1 MDRCVVLVDAGYLLGAAASLLAGEPSRSRITVDHSALIQGLRERAEADTQQPLLRIYWFD 60 Query: 51 TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110 Q V + + +D + + E + Sbjct: 61 GAPDRVPQ---------PEHRRLRVMPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELA 111 Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162 +V+ +GDG + + + V + + +D S+ L +AD Sbjct: 112 RNRACSDVVLVTGDGDLLPGLMSAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 166 >gi|289772213|ref|ZP_06531591.1| conserved hypothetical protein [Streptomyces lividans TK24] gi|289702412|gb|EFD69841.1| conserved hypothetical protein [Streptomyces lividans TK24] Length = 406 Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 24/174 (13%), Positives = 54/174 (31%), Gaps = 26/174 (14%) Query: 6 EKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSRAI------VIRAYYYTT 51 ++ + +D L ++ +D+ L++ R RA ++R Y++ Sbjct: 5 DRCIVLVDAGYLLGAAASLLAGEPSRSRITVDHAALIQGLRDRAESDTQQPLLRIYWFDG 64 Query: 52 VVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE 111 Q V + + +D + + E + Sbjct: 65 APDRVPQ---------PEHRRLRVMPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELAR 115 Query: 112 G--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162 +V+ +GDG + A + V + + +D S+ L +AD Sbjct: 116 NRACSDVVLVTGDGDLLPGMMAAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 169 >gi|114570762|ref|YP_757442.1| hypothetical protein Mmar10_2212 [Maricaulis maris MCS10] gi|114341224|gb|ABI66504.1| conserved hypothetical protein [Maricaulis maris MCS10] Length = 201 Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 61/180 (33%), Gaps = 36/180 (20%) Query: 7 KIALFIDGANLYASSKALG--FDIDYRKLLKA--FRSRAIVIRAYYYTTVV--------- 53 K+A+ IDG ++ G ++ D+ + L R ++RA YY Sbjct: 2 KVAVLIDGGFTRVLARKDGHSYNPDFIENLAHCVVSDRETLLRALYYDCEPFTGTVQLPV 61 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRK----------------RVKSS 97 +++FS LD L F V K +F RK + Sbjct: 62 SGEDKEFSKSGKWLDDLARKDFFAVRKGVLKFRGFKPRKIPVSGRALSDQDFAPDFEQKG 121 Query: 98 MDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQ 155 +D+ + +D S +E +V+ S D + ++ + VL P S Sbjct: 122 VDMRIGLDMATLSNGPKVERIVLISNDTDCVPAMKHARKAGVQ-----LVLGVPPNQSPA 176 >gi|302347101|ref|YP_003815399.1| hypothetical protein HMPREF0659_A7383 [Prevotella melaninogenica ATCC 25845] gi|302151044|gb|ADK97305.1| conserved hypothetical protein [Prevotella melaninogenica ATCC 25845] Length = 256 Score = 61.2 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 27/173 (15%), Positives = 56/173 (32%), Gaps = 26/173 (15%) Query: 6 EKIALFIDGANLYASSKALG---------FDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP 56 +++ + DG N Y + K + +D ++F V+ Y T Sbjct: 44 KRVTFYFDGFNFYFALKRKKKISPEWKDFYWLDLVAFCESFLGPDQVLEKVIYFTASPLS 103 Query: 57 EQQFSPLHPLLDWLH---YNGFQVVAKVAK------EFTENCGRKRVKSSMDVELAVDAF 107 Q+ S L+ + F+V+ + + K + DV ++V Sbjct: 104 PQKNSRQSAFLNANRILHSDKFEVIRGKYMSKQIECPYCKYSISKPEEKRTDVNISVRMM 163 Query: 108 EQS--EGLEHLVIFSGDGCFTTLVAALQRK--VKKVTIVSTVLSDPSMASDQL 156 + + +V+ S D + + KKV + P + +L Sbjct: 164 ADCVQDKTDVIVLISADTDLIPPLNFIHTNYPNKKVKVF----FPPGSHALEL 212 >gi|302383830|ref|YP_003819653.1| hypothetical protein Bresu_2723 [Brevundimonas subvibrioides ATCC 15264] gi|302194458|gb|ADL02030.1| conserved hypothetical protein [Brevundimonas subvibrioides ATCC 15264] Length = 256 Score = 61.2 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 25/168 (14%), Positives = 48/168 (28%), Gaps = 13/168 (7%) Query: 5 REKIALFIDGANLYASSKALGFD----IDYRKLLKAFRSRAI-VIRAYYYTTVVGDPEQQ 59 R++ L++DG NL+ + L +D L +A + A + + + + Sbjct: 25 RKRARLYVDGFNLHHAILDLNRHELLWLDLMALGRALLPPGERLTGAVWVSAHRPQRKDR 84 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCG------RKRVKSSMDVELAVDAFEQSE-- 111 + L + + ++C + DV LA+ + Sbjct: 85 MQAMMAYEAALVARDVRCLMGHFVVHGDHCHACGHQWMDATEKQSDVNLALSIAADAAAD 144 Query: 112 GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQ 159 + I + DG L IVS L Sbjct: 145 RFDTAYIVTTDGDHAATTRFLHESYPHKRIVSVAPPGRGHNRQLLEWA 192 >gi|326779887|ref|ZP_08239152.1| Domain of unknown function DUF88 protein [Streptomyces cf. griseus XylebKG-1] gi|326660220|gb|EGE45066.1| Domain of unknown function DUF88 protein [Streptomyces cf. griseus XylebKG-1] Length = 418 Score = 60.8 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 23/175 (13%), Positives = 54/175 (30%), Gaps = 26/175 (14%) Query: 5 REKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSRAI------VIRAYYYT 50 ++ + +D L ++ +D+ L++ R RA ++R Y++ Sbjct: 1 MDRCVVLVDAGYLLGAAASLLAGEPARSRITVDHAALIQGLRERAEADTQQPLLRIYWFD 60 Query: 51 TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110 Q V + + +D + + E + Sbjct: 61 GAPDRVPQ---------PEHRRLRVMPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELA 111 Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162 +V+ +GDG + + + V + + +D S+ L +AD Sbjct: 112 RNRACSDVVLVTGDGDLLPGLMSAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 166 >gi|333027817|ref|ZP_08455881.1| hypothetical protein STTU_5321 [Streptomyces sp. Tu6071] gi|332747669|gb|EGJ78110.1| hypothetical protein STTU_5321 [Streptomyces sp. Tu6071] Length = 434 Score = 60.8 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 23/174 (13%), Positives = 55/174 (31%), Gaps = 26/174 (14%) Query: 6 EKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSRAI------VIRAYYYTT 51 ++ + +D L ++ +D+ L++ R RA ++R Y++ Sbjct: 5 DRCVVLVDAGYLLGAAASLLAGDPSRSRITVDHAALIQRLRERAEEETGQPLLRIYWFDG 64 Query: 52 VVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE 111 Q + V + + +D + + E + Sbjct: 65 APDRVPQ---------PEHRRLRVRPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELAR 115 Query: 112 G--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162 +V+ +GDG + + + V + + +D S+ L +AD Sbjct: 116 NRACSDVVLVTGDGDLLPGLVSAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 169 >gi|326440583|ref|ZP_08215317.1| hypothetical protein SclaA2_05933 [Streptomyces clavuligerus ATCC 27064] Length = 410 Score = 60.8 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 21/175 (12%), Positives = 52/175 (29%), Gaps = 26/175 (14%) Query: 5 REKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRS------RAIVIRAYYYT 50 ++ + +D L ++ +D+ L++ R ++R Y++ Sbjct: 1 MDRCVVLVDAGYLLGAAASLLAGEPARSRITVDHTALIQGLRELAERDTERPLLRIYWFD 60 Query: 51 TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110 Q V + + +D + + E + Sbjct: 61 GAPDRVPQ---------PEHRRLRVMPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELA 111 Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162 +V+ +GDG + + + V + + +D S+ L +AD Sbjct: 112 RNRACSDVVLVTGDGDLLPGLMSAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 166 >gi|290961181|ref|YP_003492363.1| hypothetical protein SCAB_68271 [Streptomyces scabiei 87.22] gi|260650707|emb|CBG73823.1| conserved hypothetical protein [Streptomyces scabiei 87.22] Length = 407 Score = 60.8 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 23/175 (13%), Positives = 53/175 (30%), Gaps = 26/175 (14%) Query: 5 REKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSR------AIVIRAYYYT 50 ++ + +D L ++ +D+ L++ R R ++R Y++ Sbjct: 1 MDRCIVLVDAGYLLGAAASLLAGEPSRSRITVDHAALIQGLRERAEADTERPLLRIYWFD 60 Query: 51 TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110 Q V + + +D + + E + Sbjct: 61 GAPDRVPQ---------PEHRRLRVMPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELA 111 Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162 +V+ +GDG + A + V + + +D S+ L +AD Sbjct: 112 RNRACSDVVLVTGDGDLLPGMMAAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 166 >gi|225619659|ref|YP_002720916.1| hypothetical protein BHWA1_00718 [Brachyspira hyodysenteriae WA1] gi|225214478|gb|ACN83212.1| hypothetical protein BHWA1_00718 [Brachyspira hyodysenteriae WA1] Length = 364 Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 26/170 (15%), Positives = 64/170 (37%), Gaps = 19/170 (11%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 ++I ++ID N+ L +++++ ++ S +Y + D E +S Sbjct: 1 MKRIGIYIDLENVSH----LSYEVNFEQMFNNIFS--------FYKNNLKDKEIVYSIKK 48 Query: 65 PLLDWLHYNGFQVVAKV-AKEFTENCGRKRVKSSMDVELAVDAFE---QSEGLEHLVIFS 120 D + + + + + K+ D+ ++DAFE ++ ++ + S Sbjct: 49 AYGDAKSIKKYSKNLRDMHIDIVYSVPVNKAKNMADMISSIDAFEDFVINKKIDIAIFVS 108 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 D +T ++ L R V IV+ + + ++ + K Sbjct: 109 RDVDYTVVMDRLSRYGAIVGIVTVFDNSKRNI---FKTSCNHIFKIEDYK 155 >gi|302550773|ref|ZP_07303115.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM 40736] gi|302468391|gb|EFL31484.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM 40736] Length = 406 Score = 60.8 bits (146), Expect = 9e-08, Method: Composition-based stats. Identities = 24/174 (13%), Positives = 54/174 (31%), Gaps = 26/174 (14%) Query: 6 EKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSRAI------VIRAYYYTT 51 ++ + +D L ++ +D+ L++ R RA ++R Y++ Sbjct: 5 DRCIVLVDAGYLLGAAASLLAGEPSRSRITVDHAALIQGLRERAESDTQQPLLRIYWFDG 64 Query: 52 VVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE 111 Q V + + +D + + E + Sbjct: 65 APDRVPQ---------PEHRRLRVMPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELAR 115 Query: 112 G--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162 +V+ +GDG + A + V + + +D S+ L +AD Sbjct: 116 NRACSDVVLVTGDGDLLPGMMAAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 169 >gi|307331652|ref|ZP_07610759.1| protein of unknown function DUF88 [Streptomyces violaceusniger Tu 4113] gi|306882678|gb|EFN13757.1| protein of unknown function DUF88 [Streptomyces violaceusniger Tu 4113] Length = 227 Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 23/175 (13%), Positives = 54/175 (30%), Gaps = 26/175 (14%) Query: 5 REKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSRAI------VIRAYYYT 50 ++ + +D L ++ +D+ L++ R RA ++R Y++ Sbjct: 1 MDRCVVLVDAGYLLGAAASLLAGEPARSRISVDHATLIQGLRERAEAETECPLLRIYWFD 60 Query: 51 TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110 Q V + + +D + + E + Sbjct: 61 GAPDRVPQ---------PEHRRLRVMPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELA 111 Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162 +V+ +GDG + + + V + + +D S+ L +AD Sbjct: 112 RNRACADIVLVTGDGDLLPGLMSAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 166 >gi|301117790|ref|XP_002906623.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262107972|gb|EEY66024.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 564 Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 36/190 (18%), Positives = 71/190 (37%), Gaps = 19/190 (10%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA--IVIRAYYYTTVVGDPEQQFSPL 63 + AL IDGA ++LG +ID+ +L A +Y+ + D Sbjct: 13 KTTALIIDGAYARIHGRSLGGNIDFSRLRTELEEIASTEFDECWYFDSQRRDAPGNSQLA 72 Query: 64 HPLLD--WLHYNGFQVV-----AKVAKEFTENCGRKR---VKSSMDVELA--VDAFEQSE 111 + G Q+ K +CG K V+ +D +A + + Sbjct: 73 SEFHALKYARPRGPQLQVEIYSTKPRSCKCTSCGHKFNQNVQKGVDNGIATKLLTLTLTR 132 Query: 112 GLEHLVIFSGDGCFTTLVAALQ-RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 +E +++ SGDG F T + ++ ++V +V + + S L++ A M + + Sbjct: 133 NIERVILVSGDGDFYTSLRYVRNELAREVWVVGFLDTV----SGDLQQLASQIMWIDEMW 188 Query: 171 NEIARDPDED 180 + + Sbjct: 189 GDATKREATT 198 >gi|296171006|ref|ZP_06852490.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894402|gb|EFG74150.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 214 Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 59/166 (35%), Gaps = 19/166 (11%) Query: 8 IALFIDGANLYAS----SKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +A+++DG NLY S +D L + R ++ + + Y+T V + + Sbjct: 13 LAVYVDGFNLYHGLHEASGRKHLWLDVVALAQNLRPQSSLAKVMYFTAPVLNDSGGLARQ 72 Query: 64 HPLLDWLHYNG----------FQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112 L+ L +Q K K+ R + DV +A++ + Sbjct: 73 QRYLNALKAQNPGVIEIVEGRYQQKNKTCKKCGNTW-RTYEEKETDVNIAINLVADASIK 131 Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLR 157 + +I S D V ++ + + + P ++L+ Sbjct: 132 LTDAALIISADSDLAPGVKLARKLNPNLFVAA--AFPPRRVCNELK 175 >gi|218779797|ref|YP_002431115.1| cold-shock DNA-binding domain protein [Desulfatibacillum alkenivorans AK-01] gi|218761181|gb|ACL03647.1| cold-shock DNA-binding domain protein [Desulfatibacillum alkenivorans AK-01] Length = 409 Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 31/197 (15%), Positives = 69/197 (35%), Gaps = 31/197 (15%) Query: 7 KIALFIDGANLYASSKALGF------DIDYRKLLKAFR-----------SRAIVIRAYYY 49 +I +F DG Y S + + + + + V+ A+Y+ Sbjct: 11 RIGVFYDGNFFYHVSNYYKYVHPRRARLSVAGIHEFIKSQVAESEGVDPRYCQVVDAHYF 70 Query: 50 TTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ 109 +G E + + +++ + R + +DV LA++AFE Sbjct: 71 RGRLGAQEAEQRQVLM----SERVFDEILMREGIVTHYLPLGARGEKGIDVWLALEAFEL 126 Query: 110 S--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS--TVLSDPSM------ASDQLRRQ 159 + + +V+ +GDG + L+ + ++ ++ +D S L Q Sbjct: 127 TVLKHFNVVVLIAGDGDYVPLIRKINTLGTRIMVLGWDFEYTDNQNNKRRTVTSVNLLDQ 186 Query: 160 ADYFMDLAYLKNEIARD 176 Y + + L ++ R Sbjct: 187 VTYPILMHTLIDDKTRR 203 >gi|282862137|ref|ZP_06271200.1| protein of unknown function DUF88 [Streptomyces sp. ACTE] gi|282563162|gb|EFB68701.1| protein of unknown function DUF88 [Streptomyces sp. ACTE] Length = 415 Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 23/175 (13%), Positives = 54/175 (30%), Gaps = 26/175 (14%) Query: 5 REKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSRAI------VIRAYYYT 50 ++ + +D L ++ +D+ L++ R RA ++R Y++ Sbjct: 1 MDRCVVLVDAGYLLGAAASLLAGEPARSRITVDHAALIQGLRLRAEADTEQPLLRIYWFD 60 Query: 51 TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110 Q V + + +D + + E + Sbjct: 61 GAPDRVPQ---------PEHRRLRVMPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELA 111 Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162 +V+ +GDG + + + V + + +D S+ L +AD Sbjct: 112 RNRACSDVVLVTGDGDLLPGLMSAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 166 >gi|256832383|ref|YP_003161110.1| hypothetical protein Jden_1151 [Jonesia denitrificans DSM 20603] gi|256685914|gb|ACV08807.1| hypothetical protein Jden_1151 [Jonesia denitrificans DSM 20603] Length = 388 Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 57/181 (31%), Gaps = 22/181 (12%) Query: 5 REKIALFIDGANLY--------ASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP 56 ++ A+F+D L+ A+S + Y L++ RA+ + Sbjct: 2 NKQSAIFVDAGFLHSVGAQRTAATSYRHAVKLQYSTLIRGIT---HTTRAHSGVENLRTY 58 Query: 57 EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LE 114 S L D + K + +D+ LA+D + Sbjct: 59 WYDASRDGLLTDEHKRIA---MIPGVKVRLGRVNYYGEQKGVDLRLALDLVGLARTGAAS 115 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 + SGD T V Q +V ++ + L AD +LA+ + I Sbjct: 116 VAYLISGDDDLTEAVEEAQSLGMRVVLLGIDDKSSRI---GLASVAD---NLAFAVDAIE 169 Query: 175 R 175 R Sbjct: 170 R 170 >gi|318078652|ref|ZP_07985984.1| hypothetical protein SSA3_18541 [Streptomyces sp. SA3_actF] Length = 229 Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 23/174 (13%), Positives = 55/174 (31%), Gaps = 26/174 (14%) Query: 6 EKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSRAI------VIRAYYYTT 51 ++ + +D L ++ +D+ L++ R RA ++R Y++ Sbjct: 5 DRCVVLVDAGYLLGAAASLLAGDPSRSRITVDHAALIQRLRERAEEETGQPLLRIYWFDG 64 Query: 52 VVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE 111 Q + V + + +D + + E + Sbjct: 65 APDRVPQ---------PEHRRLRVRPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELAR 115 Query: 112 G--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162 +V+ +GDG + + + V + + +D S+ L +AD Sbjct: 116 NRACSDIVLVTGDGDLLPGLVSAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 169 >gi|288561663|ref|YP_003429069.1| hypothetical protein BpOF4_20909 [Bacillus pseudofirmus OF4] gi|288548295|gb|ADC52177.1| hypothetical protein BpOF4_20909 [Bacillus pseudofirmus OF4] Length = 191 Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 28/177 (15%), Positives = 59/177 (33%), Gaps = 12/177 (6%) Query: 7 KIALFIDGANLYASS------KALGFDIDYRKLLKAFRSRA-IVIRAYYYTTVVGDPEQQ 59 K A+ +D N ++ + + + + + Y V + Sbjct: 2 KAAILVDEQNAMSTMHLMDVKGLTRWKTFFDAIHHVVKRDYPTLQMDYCMYGAVVPKKVN 61 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS-EGLEHLVI 118 +S + H + N + +DVELA+D ++++ EG E L++ Sbjct: 62 YSLHEKRRRFFHSLSKDQIKVSLGYCLLNAQGVMTEKGVDVELALDIYQKALEGYELLIV 121 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 FSGD + + KV V + S + D + + + + + Sbjct: 122 FSGDSDLVPAIERAKALGTKVVAVLGDNQPATHMS----KVCDATIPFTAIVHLLPK 174 >gi|251772713|gb|EES53276.1| protein of unknown function DUF88 [Leptospirillum ferrodiazotrophum] Length = 307 Score = 60.0 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 43/119 (36%), Gaps = 7/119 (5%) Query: 55 DPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTEN----CGRKRVKSSMDVELAVDAFEQS 110 D Q+ S + + E G + +D+ + +D + Sbjct: 128 DEIQKRSSFLEFKYVGQLVLRPYRVREMQRDKEGGILYQGTVEGEKGVDIGITIDMIAKM 187 Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMA---SDQLRRQADYFMDL 166 + VI SGD F L+ L+ ++K V +S ++ S Q++ DYF + Sbjct: 188 PHYDAAVIVSGDTDFIPLIQYLKDQLKLVYSLSLSRTENGQVQIFSPQIKSAVDYFHAI 246 >gi|257387927|ref|YP_003177700.1| hypothetical protein Hmuk_1879 [Halomicrobium mukohataei DSM 12286] gi|257170234|gb|ACV47993.1| protein of unknown function DUF88 [Halomicrobium mukohataei DSM 12286] Length = 152 Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 53/167 (31%), Gaps = 31/167 (18%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 ++ +F+DG N+ FD+D + + + + Y Sbjct: 15 SEPRVGVFVDGPNV----LRSEFDVDLDDVREEAENWGRLAITRLYV--------DEHAT 62 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEH--LVIFSG 121 L+ GF+VV +DV+LAVDA L I S Sbjct: 63 PGLIQAAEARGFEVVV--------------TSGDVDVKLAVDATAAGADDAIDLLAIVSR 108 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 D F ++ ++ + + ++ SD LR A L Sbjct: 109 DTDFKPVLESVGERGIETLAIAPGEHGR---SDALRNAAQNATTLEE 152 >gi|329940919|ref|ZP_08290199.1| hypothetical protein SGM_5691 [Streptomyces griseoaurantiacus M045] gi|329300213|gb|EGG44111.1| hypothetical protein SGM_5691 [Streptomyces griseoaurantiacus M045] Length = 406 Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 24/174 (13%), Positives = 54/174 (31%), Gaps = 26/174 (14%) Query: 6 EKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSRAI------VIRAYYYTT 51 ++ + +D L ++ +D+ L++ R RA ++R Y++ Sbjct: 5 DRCIVLVDAGYLLGAAASLLAGEPSRSRITVDHAALIQGLRERAESDTRQPLLRIYWFDG 64 Query: 52 VVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE 111 Q V + + +D + + E + Sbjct: 65 APDRVPQ---------PEHRRLRVMPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELAR 115 Query: 112 G--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162 +V+ +GDG + A + V + + +D S+ L +AD Sbjct: 116 NRACSDVVLITGDGDLLPGMMAAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 169 >gi|29832687|ref|NP_827321.1| hypothetical protein SAV_6145 [Streptomyces avermitilis MA-4680] gi|29609807|dbj|BAC73856.1| hypothetical protein [Streptomyces avermitilis MA-4680] Length = 408 Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 23/174 (13%), Positives = 53/174 (30%), Gaps = 26/174 (14%) Query: 6 EKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSR------AIVIRAYYYTT 51 ++ + +D L ++ +D+ L++ R R ++R Y++ Sbjct: 5 DRCIVLVDAGYLLGAAASLLAGEPSRSRITVDHAALIQGLRERAEFDTERPLLRIYWFDG 64 Query: 52 VVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE 111 Q V + + +D + + E + Sbjct: 65 APDRVPQ---------PEHRRLRVMPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELAR 115 Query: 112 G--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162 +V+ +GDG + A + V + + +D S+ L +AD Sbjct: 116 NRACSDVVLVTGDGDLLPGMMAAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 169 >gi|308177196|ref|YP_003916602.1| hypothetical protein AARI_14200 [Arthrobacter arilaitensis Re117] gi|307744659|emb|CBT75631.1| hypothetical protein AARI_14200 [Arthrobacter arilaitensis Re117] Length = 335 Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 31/193 (16%), Positives = 57/193 (29%), Gaps = 38/193 (19%) Query: 1 MFDPREKIALFIDGANLYA--------SSKALGFDIDYRKLLKAFRS------RAIVIRA 46 M + A+FID L + ++ F Y L++ +R Sbjct: 1 MMNQ---TAIFIDAGFLLSLGGHRAAGTTLRSAFTTHYESLVRGIVQTVKKNTGLNNLRV 57 Query: 47 YYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA 106 Y+Y S + G K + +D+ LA+D Sbjct: 58 YWYDA---------SKDGLFTEQHKRIGLIPG---VKVRLGRISYNGEQKGVDLRLALDL 105 Query: 107 FEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM----ASDQLRRQA 160 + + SGD V Q KV ++ SD + ++ L A Sbjct: 106 VGVARNRSASIAYLVSGDDDLAEAVEEAQDLGMKVVLLGVAKSDSRLGVASVAEHLALTA 165 Query: 161 DYFMDLAYLKNEI 173 D + + +++ Sbjct: 166 D---YIETISDQL 175 >gi|170290659|ref|YP_001737475.1| hypothetical protein Kcr_1046 [Candidatus Korarchaeum cryptofilum OPF8] gi|170174739|gb|ACB07792.1| protein of unknown function DUF88 [Candidatus Korarchaeum cryptofilum OPF8] Length = 167 Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 25/179 (13%), Positives = 56/179 (31%), Gaps = 33/179 (18%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +++A+ +DG N+ K LG D ++ K + A Sbjct: 11 KTKQLAVIVDGPNMLR--KELGT--DLEEIRKLAEREGRIRLAVV--------VLDRKAP 58 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L++ + GF+ + K + + E ++ +++ + Sbjct: 59 EKLVEAVTNAGFKPLISTGKVEVDFSIVCMEAIND------------EKIDMIIMAARSA 106 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL-----AYLKNEIARDP 177 + L+ + K+V I+ S L++ D ++ L L D Sbjct: 107 AYMPLIHKAKESGKEVMIIGAEPGF----SVALKKACDQYILLPSSSPEDLAEPEGEDE 161 >gi|182439235|ref|YP_001826954.1| hypothetical protein SGR_5442 [Streptomyces griseus subsp. griseus NBRC 13350] gi|178467751|dbj|BAG22271.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 421 Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 23/174 (13%), Positives = 54/174 (31%), Gaps = 26/174 (14%) Query: 6 EKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSRAI------VIRAYYYTT 51 ++ + +D L ++ +D+ L++ R RA ++R Y++ Sbjct: 5 DRCVVLVDAGYLLGAAASLLAGEPARSRITVDHAALIQGLRERAEADTQQPLLRIYWFDG 64 Query: 52 VVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE 111 Q V + + +D + + E + Sbjct: 65 APDRVPQ---------PEHRRLRVMPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELAR 115 Query: 112 G--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162 +V+ +GDG + + + V + + +D S+ L +AD Sbjct: 116 NRACSDVVLVTGDGDLLPGLMSAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 169 >gi|294812108|ref|ZP_06770751.1| DUF88 domain-containing protein [Streptomyces clavuligerus ATCC 27064] gi|294324707|gb|EFG06350.1| DUF88 domain-containing protein [Streptomyces clavuligerus ATCC 27064] Length = 413 Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 21/174 (12%), Positives = 52/174 (29%), Gaps = 26/174 (14%) Query: 6 EKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRS------RAIVIRAYYYTT 51 ++ + +D L ++ +D+ L++ R ++R Y++ Sbjct: 5 DRCVVLVDAGYLLGAAASLLAGEPARSRITVDHTALIQGLRELAERDTERPLLRIYWFDG 64 Query: 52 VVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE 111 Q V + + +D + + E + Sbjct: 65 APDRVPQ---------PEHRRLRVMPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELAR 115 Query: 112 G--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162 +V+ +GDG + + + V + + +D S+ L +AD Sbjct: 116 NRACSDVVLVTGDGDLLPGLMSAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 169 >gi|237714047|ref|ZP_04544528.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262407099|ref|ZP_06083648.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294644732|ref|ZP_06722480.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a] gi|229445871|gb|EEO51662.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262355802|gb|EEZ04893.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292639941|gb|EFF58211.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a] Length = 122 Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 17/122 (13%), Positives = 39/122 (31%), Gaps = 11/122 (9%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLL-----KAFRSRAIVIRAYYYTTVVGDP 56 + ++K+ +++DG N Y K+ + + Y L +S ++ Y++ D Sbjct: 1 MEDKKKVIVYVDGFNFYYGLKSKKWKMCYWLDLVSFFNSFLKSYQELVEVNYFSARPTDA 60 Query: 57 EQQFSPLHPLLDWLHYNGFQVVA-----KVAKE-FTENCGRKRVKSSMDVELAVDAFEQS 110 + F ++ K K + + DV +A + Sbjct: 61 GKHDRQDKLFQANKCNPKFNLILGKYLKKEIKCRYCGGIIHSFEEKETDVRIATKILSDA 120 Query: 111 EG 112 Sbjct: 121 YK 122 >gi|121606339|ref|YP_983668.1| hypothetical protein Pnap_3450 [Polaromonas naphthalenivorans CJ2] gi|120595308|gb|ABM38747.1| hypothetical protein Pnap_3450 [Polaromonas naphthalenivorans CJ2] Length = 375 Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 27/139 (19%), Positives = 37/139 (26%), Gaps = 28/139 (20%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSR-AIVIRAYYYTTVVGDPEQQFSPLHPL 66 AL ID N + ID + V Y L L Sbjct: 16 AALLIDADNF-----SDPQAID--AAWAELNAYAGRVSVCRAYGAGP--------RLEWL 60 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGC 124 Y G + + + K++ D L DA + I SGD Sbjct: 61 QSVWRYLGTRTFPNLPLQ----------KNTTDAALIADAVALHFQQGIRLFAIASGDAD 110 Query: 125 FTTLVAALQRKVKKVTIVS 143 F L L+ +V S Sbjct: 111 FAPLAVRLREWGCEVWCFS 129 >gi|302561149|ref|ZP_07313491.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000] gi|302478767|gb|EFL41860.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000] Length = 184 Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 24/175 (13%), Positives = 54/175 (30%), Gaps = 26/175 (14%) Query: 5 REKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSRAI------VIRAYYYT 50 ++ + +D L ++ +D+ L++ R RA ++R Y++ Sbjct: 1 MDRCIVLVDAGYLLGAAASLLAGEPSRSRITVDHAALIQGLRERAESDTRQPLLRIYWFD 60 Query: 51 TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110 Q V + + +D + + E + Sbjct: 61 GAPDRVPQ---------PEHRRLRVMPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELA 111 Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162 +V+ +GDG + A + V + + +D S+ L +AD Sbjct: 112 RNRACSDIVLVTGDGDLLPGMMAAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 166 >gi|78189973|ref|YP_380311.1| hypothetical protein Cag_2020 [Chlorobium chlorochromatii CaD3] gi|78172172|gb|ABB29268.1| hypothetical protein Cag_2020 [Chlorobium chlorochromatii CaD3] Length = 212 Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 30/170 (17%), Positives = 56/170 (32%), Gaps = 25/170 (14%) Query: 5 REKIALFIDGANLYASSKALG--------FDIDYRKL----LKAFRSRAIVIRAYYYTTV 52 ++ +DG NLY S KA +D L L F A++ + +Y + + Sbjct: 1 MNRVVFIVDGFNLYHSLKAAQAVQRPASTKWLDLCSLFSSQLYHFGKDAVLHKVFYISAL 60 Query: 53 V----GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEF------TENCGRKRVKSSMDVEL 102 + L NG + K + K + DV L Sbjct: 61 AVHLEASNPNLTKRHQAYIKCLQANGVITLLNRFKRKDVFCKLCKRSFYKYEEKETDVML 120 Query: 103 AVDAFE--QSEGLEHLVIFSGDGCFTTLVAALQRKV-KKVTIVSTVLSDP 149 A FE ++ + +V+ +GD + + Q+ K+ + + Sbjct: 121 ATTLFEQLATDNCDTVVLVTGDTDLAPAIRSGQKLFPHKLILFAFPYGTK 170 >gi|330836836|ref|YP_004411477.1| hypothetical protein Spico_0871 [Spirochaeta coccoides DSM 17374] gi|329748739|gb|AEC02095.1| Domain of unknown function DUF88 [Spirochaeta coccoides DSM 17374] Length = 265 Score = 58.1 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 27/182 (14%), Positives = 57/182 (31%), Gaps = 21/182 (11%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 R+ A++ID N+ A ++D + L + V S + Sbjct: 2 KRKNNAVYIDLENIPA-------NLDVKNLFDELTLKHNAEDDEENIFVTKMACGNSSAI 54 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ----SEGLEHLVIF 119 L L F + K+ D+ ++++A E + ++ V Sbjct: 55 KKLERKLAEYNFIIRDTPPITSAY-------KNRADLIISLEALETIITNTPSIDRYVFI 107 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179 + D FT ++ L++ K+V +V+ D + L + Sbjct: 108 TSDSDFTVIMEMLRKYGKEVYLVTKESVASKPI---FNNCCDEILLLEDFLTGVQEKNTG 164 Query: 180 DK 181 + Sbjct: 165 GR 166 >gi|103487486|ref|YP_617047.1| hypothetical protein Sala_2003 [Sphingopyxis alaskensis RB2256] gi|98977563|gb|ABF53714.1| hypothetical protein Sala_2003 [Sphingopyxis alaskensis RB2256] Length = 213 Score = 58.1 bits (139), Expect = 6e-07, Method: Composition-based stats. Identities = 26/154 (16%), Positives = 53/154 (34%), Gaps = 21/154 (13%) Query: 1 MFDPRE--KIALFIDGANLYASSKA---LGF-DIDYRKLLKAFRS--RAIVIRAYYYTTV 52 M D + F DG NL+ S+K + + D L + + + +YT V Sbjct: 5 MADQLPLIRAVAFFDGQNLFHSAKQAFGYSWPNFDPTLLAERVCQDHGWQLQQTRFYTGV 64 Query: 53 VGDPEQQFSPLHPLLDW--LHYNGFQVVAKVAKEF---------TENCGRKRVKSSMDVE 101 ++ F + + G V + + TE+ + +DV Sbjct: 65 PDAADKPFWNHFWVAKAAQMARQGVHVFTRSLRYRNKKVRLPDGTEHSFLDGDEKGIDVR 124 Query: 102 LAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQ 133 +A+D + + ++F D T + ++ Sbjct: 125 IALDVIRLALKREFDVAILFCRDQDLTEVADEIR 158 >gi|46127481|ref|XP_388294.1| hypothetical protein FG08118.1 [Gibberella zeae PH-1] Length = 206 Score = 57.7 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 32/200 (16%), Positives = 57/200 (28%), Gaps = 37/200 (18%) Query: 8 IALFIDGANLYASSKALG--------FDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 + ++ID +N+ +A+ ++ D L + + + + Sbjct: 14 VCIYIDDSNVAIRGRAMHDPQGTLTPWNYDIDVLANIIIQQFDLTAIEPFVQKSLNFYGA 73 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGL------ 113 P LD L G + DV LA D EQ++ Sbjct: 74 DLHRSPQLDHLRGLGLVYG------CDCPRNGHGHEKQADVALATDMTEQAKHALDFGIA 127 Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF---------- 163 V+ SGD F V + V + + S + R F Sbjct: 128 RDFVLVSGDSDFIPAVRKVLGYGFNVHVWA----WRRSLSSEFYRLKQDFEDNCVPGLGQ 183 Query: 164 ---MDLAYLKNEIARDPDED 180 L +++ R P+ D Sbjct: 184 MRVHFLESHLHQLTRSPESD 203 >gi|282897247|ref|ZP_06305249.1| hypothetical protein CRD_02171 [Raphidiopsis brookii D9] gi|281197899|gb|EFA72793.1| hypothetical protein CRD_02171 [Raphidiopsis brookii D9] Length = 128 Score = 57.7 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 48/129 (37%), Gaps = 11/129 (8%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRA-YYYTTVVGDPEQQFSPLHPL 66 A+ D NL +K F D+ K L + ++ + +S Sbjct: 6 TAILYDIENL---TKGYSFSKDFIKELSLKQIYRQILEVDIVNKICLQRAYANWSDHR-- 60 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDG 123 L L ++ + F R K++ D++L VD + + +E VI SGDG Sbjct: 61 LSLLRGEINELGIDPIQIF--GFARYHKKNAADIQLVVDTMDITIRFPHIEVYVIVSGDG 118 Query: 124 CFTTLVAAL 132 F +L L Sbjct: 119 GFASLAKKL 127 >gi|170093988|ref|XP_001878215.1| predicted protein [Laccaria bicolor S238N-H82] gi|164646669|gb|EDR10914.1| predicted protein [Laccaria bicolor S238N-H82] Length = 565 Score = 57.7 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 55/160 (34%), Gaps = 15/160 (9%) Query: 1 MFDP-REKIALFIDGANLYASSKALGFDI-DYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58 M + E +A+F D N A S G++I + L + +AY + + Sbjct: 1 MQNNGSENVAIFWDYENCPAPSNISGYEIVKGIRSLAQLYGSVKLFKAYLEISSLESGLL 60 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEH 115 L L +G ++ K D + VD + Sbjct: 61 TPRLLTL-TSELQSSGVSLIHCP---------HNGRKDVADKMMLVDMLSHAIDNPAPTT 110 Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQ 155 +V+ SGD F ++ L+ + V +++ + S+ S Sbjct: 111 IVLISGDRDFAYAISVLRLRRYHVVLITLANAHLSLTSQA 150 >gi|291450828|ref|ZP_06590218.1| conserved hypothetical protein [Streptomyces albus J1074] gi|291353777|gb|EFE80679.1| conserved hypothetical protein [Streptomyces albus J1074] Length = 403 Score = 57.7 bits (138), Expect = 7e-07, Method: Composition-based stats. Identities = 21/149 (14%), Positives = 44/149 (29%), Gaps = 18/149 (12%) Query: 23 ALGFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQ 76 +D+ L++ R RA ++R Y++ Q Sbjct: 21 RSRISVDHATLVRQLRERAEAETAQPLLRIYWFDGAPDRVPQ---------PEHRRLRVM 71 Query: 77 VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQR 134 V + + +D + + E + +V+ +GDG + A + Sbjct: 72 PRVTVRLGALTRSDGRWAQKGVDAAMHAELTELARNKACSDIVLVTGDGDLLPGMTAAKE 131 Query: 135 KVKKVTIVST-VLSDPSMASDQLRRQADY 162 V + + S+ L +AD Sbjct: 132 HGVAVHLWAVQAAGGDYNQSEDLVAEADE 160 >gi|291443977|ref|ZP_06583367.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] gi|291346924|gb|EFE73828.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] Length = 232 Score = 57.7 bits (138), Expect = 8e-07, Method: Composition-based stats. Identities = 23/174 (13%), Positives = 54/174 (31%), Gaps = 26/174 (14%) Query: 6 EKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSRAI------VIRAYYYTT 51 ++ + +D L ++ +D+ L++ R RA ++R Y++ Sbjct: 5 DRCVVLVDAGYLLGAAASLLAGEPARSRITVDHAALIQGLRERAEADTQQPLLRIYWFDG 64 Query: 52 VVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE 111 Q V + + +D + + E + Sbjct: 65 APDRVPQ---------PEHRRLRVMPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELAR 115 Query: 112 G--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162 +V+ +GDG + + + V + + +D S+ L +AD Sbjct: 116 NRACSDVVLVTGDGDLLPGLMSAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 169 >gi|28897852|ref|NP_797457.1| hypothetical protein VP1078 [Vibrio parahaemolyticus RIMD 2210633] gi|153838031|ref|ZP_01990698.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810] gi|28806065|dbj|BAC59341.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633] gi|149748565|gb|EDM59424.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810] Length = 249 Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 29/177 (16%), Positives = 63/177 (35%), Gaps = 25/177 (14%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M IA++ID N+ AS D +++ +F S T+ Q Sbjct: 10 MKKKNFNIAVYIDMENIAAS------DFQLEEVMNSFLSADD--EYNCIFTIKSAYGNQA 61 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE----QSEGLEHL 116 + L + + F ++ + K+ D+ L++DAFE + ++ Sbjct: 62 TAKKSLKTQILEHNFNIIDTPKI--------GKEKNRADLLLSLDAFESLHLDNPRVDRY 113 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSD-PSMASDQLRRQADYFMDLAYLKNE 172 + D FT + L++ ++V +V ++ + D + + + Sbjct: 114 CFMTTDSDFTVIADKLRKFGREVWLVCKKSDKDRAIIAKSF----DNLLFVEDFLPK 166 >gi|294084800|ref|YP_003551560.1| hypothetical protein SAR116_1233 [Candidatus Puniceispirillum marinum IMCC1322] gi|292664375|gb|ADE39476.1| hypothetical protein SAR116_1233 [Candidatus Puniceispirillum marinum IMCC1322] Length = 267 Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 32/92 (34%) Query: 55 DPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLE 114 D + L N + ++ + + ++DV L++ ++ + Sbjct: 135 DSTHKSIRHKQDLIAKDNNAIEFCRSGEIQYNLLKRQYGKEKTVDVNLSLGMVLKAPIYD 194 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVL 146 +I SGD + V ++ K V VS Sbjct: 195 TAIIVSGDQDYVPAVQQVKNLGKHVINVSFQK 226 >gi|298245748|ref|ZP_06969554.1| protein of unknown function DUF88 [Ktedonobacter racemifer DSM 44963] gi|297553229|gb|EFH87094.1| protein of unknown function DUF88 [Ktedonobacter racemifer DSM 44963] Length = 451 Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 8/79 (10%) Query: 92 KRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQ-RKVKKVTIVSTVLS 147 V+S++D+ + +D E + V+ +GD FT + A L+ R K V +V Sbjct: 232 TVVQSTVDLNMLMDIIETVFDRPTISTFVLMTGDKDFTRISARLKLRLNKNVIVVGI--- 288 Query: 148 DPSMASDQLRRQADYFMDL 166 P S L A+ F+ L Sbjct: 289 -PGTVSRDLISSANQFVPL 306 Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 21/80 (26%), Positives = 29/80 (36%), Gaps = 8/80 (10%) Query: 8 IALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 IALFID N+ S + + D ++L+ R V+ A Y PE P Sbjct: 5 IALFIDFENIRYSMLNIQRREPDPQELIAVARRYGTVMVARAYADWSRQPE-------PF 57 Query: 67 LDWLHYNGFQVVAKVAKEFT 86 L V AK+ Sbjct: 58 KGSLTAAMIDRVDCPAKQRD 77 >gi|296446572|ref|ZP_06888514.1| protein of unknown function DUF88 [Methylosinus trichosporium OB3b] gi|296255926|gb|EFH03011.1| protein of unknown function DUF88 [Methylosinus trichosporium OB3b] Length = 272 Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 57/168 (33%), Gaps = 26/168 (15%) Query: 11 FIDGANLYASSKALG--------FDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 FIDG L +G +D+R+L + R +YY + + Sbjct: 13 FIDGECLNRIVSKIGDTYFSGARPPLDWRRLGDSCRK------IFYYDAIPVPKAGEDEA 66 Query: 63 LHPLLDWLHYNGFQVVAKVAKEF------TENCGRKRVKSSMDVELAVDAFEQSEG--LE 114 + + + + + R + +DV+LAVDA + Sbjct: 67 IFNARAVPKNSELSEIDRQPRYHVRTGEARHRRKRGNEQKMVDVQLAVDALSMASRGLFT 126 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162 + +GD F LV+AL VT++ +D L+ AD Sbjct: 127 SCTLITGDLDFKPLVSALVDMGVDVTLL----FPDDETNDDLKAAADQ 170 >gi|262197445|ref|YP_003268654.1| hypothetical protein Hoch_4264 [Haliangium ochraceum DSM 14365] gi|262080792|gb|ACY16761.1| protein of unknown function DUF88 [Haliangium ochraceum DSM 14365] Length = 261 Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 20/148 (13%), Positives = 44/148 (29%), Gaps = 10/148 (6%) Query: 32 KLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGR 91 L + + +Y ++ F + + + R Sbjct: 110 SLCREAWKHHLSECRRWYDAKRHTLDKMR---RFYHAVRSSTDFIDIDERGHWKVDILRR 166 Query: 92 KRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDP-- 149 + +D LAVD + + V+ SGD + + + K+V V Sbjct: 167 SVQEKGIDTSLAVDMVAMLDNYDVAVVLSGDADMIPSIEIAKNRCKQVAAVQFQQGQRTE 226 Query: 150 ---SMASDQLRRQADYFMDL--AYLKNE 172 + +L+ AD+ + + L + Sbjct: 227 RRGRGFASRLKASADFVVTIYEDDLLAQ 254 Score = 34.6 bits (78), Expect = 5.9, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 34/103 (33%), Gaps = 18/103 (17%) Query: 5 REKIALFIDGANLYASSKALGFDI-DYRKLLKAFRSR----------------AIVIRAY 47 + +LF+DG+NL+ + G + DY+ + + A ++R Y Sbjct: 1 MHRFSLFVDGSNLFGVLRGQGIQVDDYQGFYRFLFEQTVSSWHSSAPATEPLPACLVRVY 60 Query: 48 YY-TTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC 89 +Y + D + S L +V E Sbjct: 61 WYVVGQMDDWDLSDSKTQRHLQEQFERDEEVQRLALAEIGHPP 103 >gi|260361784|ref|ZP_05774809.1| conserved hypothetical protein [Vibrio parahaemolyticus K5030] gi|260877013|ref|ZP_05889368.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034] gi|260899084|ref|ZP_05907525.1| conserved hypothetical protein [Vibrio parahaemolyticus Peru-466] gi|308089166|gb|EFO38861.1| conserved hypothetical protein [Vibrio parahaemolyticus Peru-466] gi|308093770|gb|EFO43465.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034] gi|308113222|gb|EFO50762.1| conserved hypothetical protein [Vibrio parahaemolyticus K5030] Length = 240 Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 20/146 (13%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M IA++ID N+ AS D +++ +F S T+ Q Sbjct: 1 MKKKNFNIAVYIDMENIAAS------DFQLEEVMNSFLSADD--EYNCIFTIKSAYGNQA 52 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE----QSEGLEHL 116 + L + + F ++ + K+ D+ L++DAFE + ++ Sbjct: 53 TAKKSLKTQILEHNFNIIDTPKI--------GKEKNRADLLLSLDAFESLHLDNPRVDRY 104 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIV 142 + D FT + L++ ++V +V Sbjct: 105 CFMTTDSDFTVIADKLRKFGREVWLV 130 >gi|325972567|ref|YP_004248758.1| hypothetical protein SpiBuddy_2755 [Spirochaeta sp. Buddy] gi|324027805|gb|ADY14564.1| Domain of unknown function DUF88 [Spirochaeta sp. Buddy] Length = 266 Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 31/186 (16%), Positives = 66/186 (35%), Gaps = 26/186 (13%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 R+ AL+ID N+ + +D + L + + V+ + + Sbjct: 2 HRKNNALYIDLENIPSG-------LDLKMLFEELTLKHNESPEEENIFVIKMACGNSASI 54 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ----SEGLEHLVIF 119 L L F + K+ D+ ++++A E + ++ V Sbjct: 55 KKLEKQLAEYNFTIRDTP-------SITTNYKNRADLIISLEALETIIINTPVIDRYVFI 107 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQ--LRRQADYFMDLAYLKNE-IARD 176 + D FT ++ AL++ K+V +V+ SD+ D + + + + Sbjct: 108 TSDSDFTVIMEALRKYGKEVYLVT-----KESVSDKPIFNNCCDEILIIESFMPKPKTEE 162 Query: 177 PDEDKK 182 P E +K Sbjct: 163 PKEAEK 168 >gi|150378220|ref|YP_001314815.1| hypothetical protein Smed_6284 [Sinorhizobium medicae WSM419] gi|150032767|gb|ABR64882.1| conserved hypothetical protein [Sinorhizobium medicae WSM419] Length = 48 Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats. Identities = 33/47 (70%), Positives = 38/47 (80%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAY 47 MFD REKIAL IDGANL+A+SKALGF+ID+ KLL AFR RA + R Sbjct: 1 MFDQREKIALLIDGANLHAASKALGFEIDFCKLLSAFRRRASLPRCN 47 >gi|307305137|ref|ZP_07584886.1| protein of unknown function DUF88 [Sinorhizobium meliloti BL225C] gi|306902477|gb|EFN33072.1| protein of unknown function DUF88 [Sinorhizobium meliloti BL225C] Length = 92 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 34/45 (75%), Positives = 39/45 (86%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIR 45 MFD REKIAL +DG NLYA+SKALGFDIDY KLL+AFR RA ++R Sbjct: 1 MFDHREKIALLMDGPNLYAASKALGFDIDYCKLLEAFRKRAYLLR 45 >gi|150249496|gb|ABR67774.1| unknown [Saccharothrix mutabilis subsp. capreolus] Length = 278 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 49/136 (36%), Gaps = 7/136 (5%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTT----VVGDPEQQFS 61 E+I +F DG + R + +R Y +T + + Sbjct: 5 ERIGVFYDGTWFAY-LSDYFASVHPRAARVSLDGFHDALRWYVHTVTHQPLDECVVSEAH 63 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGL--EHLVIF 119 + +D V+A + + +DV LA++A+E++ + +V+ Sbjct: 64 YVRGRIDTPAVAFDAVLAAAGVVRHDLPLHAGKEKGVDVHLALEAWERATSVPLRWVVLV 123 Query: 120 SGDGCFTTLVAALQRK 135 +GD F L L+ + Sbjct: 124 TGDADFAPLATRLKTR 139 >gi|153832437|ref|ZP_01985104.1| conserved hypothetical protein [Vibrio harveyi HY01] gi|148871232|gb|EDL70104.1| conserved hypothetical protein [Vibrio harveyi HY01] Length = 241 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 57/146 (39%), Gaps = 20/146 (13%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M IA++ID N+ AS D +++ +F S T+ Q Sbjct: 2 MKKKNFNIAVYIDMENIAAS------DFQLEEVMNSFLSADD--EYNCIFTIKSAYGNQA 53 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE----QSEGLEHL 116 + L + + F ++ + + K+ D+ L++DAFE + ++ Sbjct: 54 TAKKSLKTQILEHNFNII--------DTQKIGKEKNRADLLLSLDAFESLHLDNPRVDRY 105 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIV 142 + D FT + L++ ++V +V Sbjct: 106 CFMTTDSDFTVIADKLRKFGREVWLV 131 >gi|302865596|ref|YP_003834233.1| hypothetical protein Micau_1095 [Micromonospora aurantiaca ATCC 27029] gi|315502144|ref|YP_004081031.1| hypothetical protein ML5_1342 [Micromonospora sp. L5] gi|302568455|gb|ADL44657.1| hypothetical protein Micau_1095 [Micromonospora aurantiaca ATCC 27029] gi|315408763|gb|ADU06880.1| hypothetical protein ML5_1342 [Micromonospora sp. L5] Length = 485 Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 43/132 (32%), Gaps = 5/132 (3%) Query: 28 IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD-WLHYNGFQVVAKVAKEFT 86 +D+ L A R ++ + D + + + + Sbjct: 11 VDWDNLAGAVIGRGHLVERGIVDALWSDATTRCGGHLQYKHMAAVRFDGSITTAMTEHLI 70 Query: 87 ENCGRKRVKSSMDVELAVDAFEQSEG-LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTV 145 + +K D+ L V A + V+ +GD F L+ L R +VT+V Sbjct: 71 DAEVVVSLKEQADIHLTVLAMDYLHQGCGQFVLVTGDQDFIPLIRRLLRDGCRVTVV--- 127 Query: 146 LSDPSMASDQLR 157 DP S Q R Sbjct: 128 YGDPDRLSPQFR 139 >gi|119356715|ref|YP_911359.1| hypothetical protein Cpha266_0887 [Chlorobium phaeobacteroides DSM 266] gi|119354064|gb|ABL64935.1| conserved hypothetical protein [Chlorobium phaeobacteroides DSM 266] Length = 136 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 25/136 (18%), Positives = 45/136 (33%), Gaps = 23/136 (16%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLL-------KAFRSRAIVIRAYYYTTVVGDPE 57 +E++ +++DG NLY G DY K L + ++ Y+T+ V D Sbjct: 11 KERVHVYVDGFNLYFGMLEAG--FDYCKWLNLKLLATNLLKPNQELVCVKYFTSRVSDNP 68 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRK------RVKSSMDVELAVDAFEQSE 111 + ++ L ++ + C R + DV +A S Sbjct: 69 DKQKRQTTYIEALESERVHILYGHYQRNPIECKRCGNIWASYNEKMTDVNIA---MSLSG 125 Query: 112 GLEHLVIFSGDGCFTT 127 + H G F Sbjct: 126 RVRH-----GHADFRR 136 >gi|149912718|ref|ZP_01901252.1| hypothetical protein RAZWK3B_01980 [Roseobacter sp. AzwK-3b] gi|149813124|gb|EDM72950.1| hypothetical protein RAZWK3B_01980 [Roseobacter sp. AzwK-3b] Length = 204 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 29/205 (14%), Positives = 59/205 (28%), Gaps = 51/205 (24%) Query: 7 KIALFIDGANLYASSK-ALGFDIDYRKLL--------KAFRSRAIVIRAYYYTTVVGDPE 57 + A+ IDG K L D +L S ++R YYY + Sbjct: 4 RYAILIDGGFFTRKLKQRLNKTPDVDDVLHAIDELKENELLSGFELLRTYYYDAYAASGK 63 Query: 58 QQ---------------FSPLHPLLDWLH-----------------YNGFQVVA------ 79 + F+ L L ++V+ Sbjct: 64 VKHPVTKQTVNLAETDVFTRNKAFLQKLELQPNISLRAGELSPRGYKLNYRVMHQDDLAS 123 Query: 80 KVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKV 139 + +E ++ + + L +D + + +V+ +GD F +R+ +V Sbjct: 124 RPLEEKDFMLDIEQKGVDLRIGLDIDRLSLRQMVRTIVVVTGDSDFIPAFKFARREGVRV 183 Query: 140 TIVSTVLSDPSMASDQLRRQADYFM 164 + +L+ D F+ Sbjct: 184 ILAHMDHGVK----RELKAHTDGFI 204 >gi|307322651|ref|ZP_07601984.1| protein of unknown function DUF88 [Sinorhizobium meliloti AK83] gi|306891697|gb|EFN22550.1| protein of unknown function DUF88 [Sinorhizobium meliloti AK83] Length = 193 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 44/172 (25%), Positives = 76/172 (44%), Gaps = 9/172 (5%) Query: 5 REKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 ++ IDG++ Y ++ L D L + A + A YY V + E+ Sbjct: 17 TQQTIFLIDGSH-YDRLRSVLESPFDLSALAHIASNGAPLDHAIYYRDVRDESEEARQRS 75 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 L WL +NGF V + + + + VELAVDA + + ++I + D Sbjct: 76 --LFGWLKHNGFMVKGR----RHSSGEPRERYGTNLVELAVDALLLAHSGDRVLILAADA 129 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMA-SDQLRRQADYFMDLAYLKNEIA 174 L+AAL+ VT++ST + ++A + L A+ F++L + IA Sbjct: 130 KLAPLLAALRDDDIDVTLISTEDAPNTIAPARHLIENANRFLELKSVLEWIA 181 >gi|319948971|ref|ZP_08023074.1| hypothetical protein ES5_06227 [Dietzia cinnamea P4] gi|319437361|gb|EFV92378.1| hypothetical protein ES5_06227 [Dietzia cinnamea P4] Length = 361 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 27/82 (32%), Gaps = 5/82 (6%) Query: 88 NCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTV 145 G +R + ++D L D + + +V+ +GD V ++ +V Sbjct: 8 EWGERRTQKAVDTLLVADMIQAAYKGHCSDMVLVTGDADMIPGVRVAVDAGVRMHLVGFG 67 Query: 146 LSDPSMASDQLRRQADYFMDLA 167 S LR D L Sbjct: 68 ---WDSISSALRHACDTTTVLD 86 >gi|186683222|ref|YP_001866418.1| hypothetical protein Npun_F2944 [Nostoc punctiforme PCC 73102] gi|186465674|gb|ACC81475.1| conserved hypothetical protein [Nostoc punctiforme PCC 73102] Length = 186 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 28/173 (16%), Positives = 62/173 (35%), Gaps = 29/173 (16%) Query: 12 IDG-ANLYASSK----ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 IDG N+Y + + +DY +L + P Sbjct: 26 IDGVGNIYEAINLKIFDNDWYMDYGRLHEFLCG------TEKSEIGGTRLWGSPPPKDTF 79 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGL-----EHLVIFSG 121 D++ GF V + + + G+ + +D +A + S + + +VI +G Sbjct: 80 WDYVKSKGFNV-----QTYERSKGK---EKKVDTAIAYQIGKDSGKIIDKENDIIVIAAG 131 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 D + + L KV + + A+ +++ A F++L ++ ++ Sbjct: 132 DKDYMPCIDDLTSDGFKVHV-----AFWGHAAREVQEAATKFINLDPHQDYLS 179 >gi|319943364|ref|ZP_08017646.1| hypothetical protein HMPREF0551_0492 [Lautropia mirabilis ATCC 51599] gi|319743179|gb|EFV95584.1| hypothetical protein HMPREF0551_0492 [Lautropia mirabilis ATCC 51599] Length = 323 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 24/183 (13%), Positives = 55/183 (30%), Gaps = 37/183 (20%) Query: 5 REKIALFIDGANLYA----------SSKALGFDI-DYRKLLKAFRSR---------AIVI 44 ++ + +D L S+K ++ + L+ + ++ Sbjct: 6 MDRFVVMVDAGYLLHQSAEIVSERASTKRHHLEVMNPAALINLLLEKTRTALGLTTRELL 65 Query: 45 RAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAV 104 R Y+Y V+ L + + +D + Sbjct: 66 RVYWYDGVMASGLSPQQRAIAELP------------DVHFRSGIVNAAGQQRGVDSLIVT 113 Query: 105 DAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVS---TVLSDPSMASDQLRRQ 159 D E + + + +GDG F + Q+K ++ ++ T L S ++ + Sbjct: 114 DLIELASNGAISDAALVTGDGDFAIGIEMAQKKGVRIAVIGVEDTELGVSHRQSFEITSR 173 Query: 160 ADY 162 AD Sbjct: 174 ADR 176 >gi|68535260|ref|YP_249965.1| hypothetical protein jk0195 [Corynebacterium jeikeium K411] gi|68262859|emb|CAI36347.1| hypothetical protein jk0195 [Corynebacterium jeikeium K411] Length = 245 Score = 55.0 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 29/201 (14%), Positives = 63/201 (31%), Gaps = 36/201 (17%) Query: 3 DPREKIALFID---------GANLY---ASSKALGFDIDYRKLLKAFRSRAIVIRAYYYT 50 +P E+ +D GANLY + + L + + + + Sbjct: 30 EPSERANELVDYCRRHIRTAGANLYRIFYYDCQPSERVLFHPLAQKQVNLGKSEEFRWNS 89 Query: 51 TVVGDPEQQFSPLHPLLDWLH-YNGFQVVAKVAKE-----------FTENCGRKRVKSSM 98 + + ++ + L NG+ + K+ E+ + + Sbjct: 90 EFLKEIVKKRKVALRRGEELETQNGYMLKFAPLKKLCRGAISVDDLRLEDFYLDITQKGV 149 Query: 99 DVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156 D+ + +D +E + +++ SGD F +R I + SD L Sbjct: 150 DMRIGLDIATMAERGIVTQIIMISGDSDFVPAAKHARRAGIDFII----DPLWARISDSL 205 Query: 157 RRQADYFMDLAYLKNEIARDP 177 + D ++ + R P Sbjct: 206 KEHVD------GVRECVRRPP 220 >gi|94312282|ref|YP_585492.1| hypothetical protein Rmet_3351 [Cupriavidus metallidurans CH34] gi|93356134|gb|ABF10223.1| conserved hypothetical protein [Cupriavidus metallidurans CH34] Length = 253 Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 59/180 (32%), Gaps = 23/180 (12%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M IA+++D N+ AS D+ LL I + Y + Q Sbjct: 14 MKKQVLNIAVYVDMENV-ASIDFALEDLMSALLLAEDDHNCIFVIKAAYGS-------QG 65 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS----EGLEHL 116 + L + L + F ++ K+ D+ +++DAFE ++ Sbjct: 66 NAKKALKEQLIDHNFTLIDTPKI--------GVEKNRADLCISLDAFETLYLGNPRIDRY 117 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 + D FT + L++ K+V + L + D + L R Sbjct: 118 CFLTSDSDFTVIGDRLRKYGKEVWLACRRKDKDRAI---LAKAFDTMLFLEDFAQAKIRT 174 >gi|320103348|ref|YP_004178939.1| hypothetical protein Isop_1808 [Isosphaera pallida ATCC 43644] gi|319750630|gb|ADV62390.1| protein of unknown function DUF88 [Isosphaera pallida ATCC 43644] Length = 276 Score = 55.0 bits (131), Expect = 5e-06, Method: Composition-based stats. Identities = 15/107 (14%), Positives = 32/107 (29%), Gaps = 5/107 (4%) Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119 F + + + + +D +AVD + + ++ Sbjct: 139 DRKKRFYYGVQAATDFVEIRQEGHWKIDLLHHTINEKGLDTSMAVDMIALRDTYDVALLI 198 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDP-----SMASDQLRRQAD 161 +GD V ++ K V ++ AS +L+ AD Sbjct: 199 TGDTDGIPGVHYVKNHAKHVGVIEFRRGSRDDFGGKTASSRLKIAAD 245 >gi|121609559|ref|YP_997366.1| hypothetical protein Veis_2603 [Verminephrobacter eiseniae EF01-2] gi|121554199|gb|ABM58348.1| hypothetical protein Veis_2603 [Verminephrobacter eiseniae EF01-2] Length = 277 Score = 54.6 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 22/183 (12%), Positives = 57/183 (31%), Gaps = 37/183 (20%) Query: 5 REKIALFIDGANLY-----------ASSKALGFDIDYRKLLKAFRS---------RAIVI 44 + + +D L+ ++S+A +D L++A R ++ Sbjct: 1 MNRFVVMVDADYLFRQAIDIVSNRASTSRADLDIVDPAGLIEALLDKSRSTLDLTRKELL 60 Query: 45 RAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAV 104 R Y+Y V+ + +D + + + + +A Sbjct: 61 RVYWYDGVMANGFTPQQRSLANID------------DVQFRAGTINGRDQQRDIASLIAT 108 Query: 105 DAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVL---SDPSMASDQLRRQ 159 D E + + V+ +GD + ++ ++ ++ S ++ + Sbjct: 109 DLLELAGHHAICDAVLVTGDSDLAVGIDMAKKHGVRIAVLGVEDPATGVARHRSAEIACR 168 Query: 160 ADY 162 AD Sbjct: 169 ADR 171 >gi|168698676|ref|ZP_02730953.1| hypothetical cytosolic protein [Gemmata obscuriglobus UQM 2246] Length = 207 Score = 54.3 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 46/128 (35%), Gaps = 9/128 (7%) Query: 45 RAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEF----TENCGRKRVKSSMDV 100 R Y+T G+ L K ++ + G D+ Sbjct: 70 RKVYFTAFTGNDNVLHDAHVYLRSLHFEPYIIKEDKGLRDRRRSKANDAGVIEKPKGADI 129 Query: 101 ELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRR 158 LAV E + + + + +F+ D + ++ A++R K V + ++ + +L Sbjct: 130 ALAVRMIEDAVLDNYQIVGLFTSDADYLPVIKAVRRMGKYVVVYGFK---ENLGNPELEY 186 Query: 159 QADYFMDL 166 D F+DL Sbjct: 187 VPDEFVDL 194 >gi|300871590|ref|YP_003786463.1| hypothetical protein BP951000_1984 [Brachyspira pilosicoli 95/1000] gi|300689291|gb|ADK31962.1| conserved hypothetical protein [Brachyspira pilosicoli 95/1000] Length = 260 Score = 54.3 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 28/172 (16%), Positives = 71/172 (41%), Gaps = 19/172 (11%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 ++I ++ID N+ L F+++++ +L+ +Y + + D + +S Sbjct: 1 MKRIGIYIDLENIAH----LKFNVNFKLILEDI--------IKFYRSNLKDKDIYYSIKK 48 Query: 65 PLLDWLHYNGFQVVAKVAKE-FTENCGRKRVKSSMDVELAVDAFE---QSEGLEHLVIFS 120 D ++ + + + K+ D+ ++DAFE ++ ++ +V S Sbjct: 49 AYGDNKSIKLYEKELRDLHIDIIHSVHINKAKNMSDMISSIDAFEDFVFNKNIDIIVFVS 108 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 D +T ++ L+R IV+T+ + D + ++ + K + Sbjct: 109 RDVDYTIVMERLKRHGAIAAIVTTITNANR---DIFQNVSNKIFKIEKYKAK 157 >gi|219128570|ref|XP_002184482.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217403932|gb|EEC43881.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 401 Score = 54.3 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 24/180 (13%), Positives = 55/180 (30%), Gaps = 29/180 (16%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +A+F D N+ S + ++ + + ++ Y + Sbjct: 11 VAIFWDYENVPVPSWCKVASEASKAIVNSVSEQGRIVDRRLYFDFSNQEQGNRWSG---- 66 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS----------EGLEHLV 117 L +GF +V + K ++D ++ D +V Sbjct: 67 --LDSSGFDLVNTPQR---------NQKETLDKKMIADVLLFCWDSATRNQGTNKGSCVV 115 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 + + DG + + L+ + ++ +D L AD + L + + R P Sbjct: 116 LVTSDGDYAYTLNKLRDRGVSSVVIYGH----GNVADILISSADVALSLKHDVLKHLRPP 171 >gi|290983351|ref|XP_002674392.1| predicted protein [Naegleria gruberi] gi|284087982|gb|EFC41648.1| predicted protein [Naegleria gruberi] Length = 650 Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats. Identities = 25/166 (15%), Positives = 55/166 (33%), Gaps = 27/166 (16%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 +K L+ID N S +Y ++L +S+ + + ++ Sbjct: 241 KKAILYIDLDNFPIS-----RPSEYLEMLAKIKSKYSIDVTAKKIFGDLNQFEKLPVDFQ 295 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG---LEHLVIFSGD 122 Q++ K++ D+ L ++ + E + +I S D Sbjct: 296 F-------SHQLIICPKV--------SSRKNTTDIALTIEVIKDLERKKPFDVFIIASSD 340 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 F +V A++ + K+ I+ + P L + +D Sbjct: 341 SDFVPVVKAIRDEGKECWIL-PSHNYPHQT---LMSICNGILDFNS 382 >gi|171057047|ref|YP_001789396.1| hypothetical protein Lcho_0356 [Leptothrix cholodnii SP-6] gi|170774492|gb|ACB32631.1| hypothetical protein Lcho_0356 [Leptothrix cholodnii SP-6] Length = 160 Score = 53.9 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 20/123 (16%), Positives = 36/123 (29%), Gaps = 25/123 (20%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +A+ +D N L+ V+ Y S L Sbjct: 4 VAVLVDCDNTAPDVLEHA--------LRVVAQFGQVVLRRGY-----------SSHTTLA 44 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCF 125 + ++ +F G K++ D+ LA+DA E + + + D F Sbjct: 45 NKWQEALVRLAFTPCLQFQYAAG----KNTSDIALALDALEAMFDRRSDTFCLVTSDSDF 100 Query: 126 TTL 128 L Sbjct: 101 AYL 103 >gi|299753919|ref|XP_002911926.1| hypothetical protein CC1G_13966 [Coprinopsis cinerea okayama7#130] gi|298410524|gb|EFI28432.1| hypothetical protein CC1G_13966 [Coprinopsis cinerea okayama7#130] Length = 938 Score = 53.9 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 58/176 (32%), Gaps = 27/176 (15%) Query: 14 GANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYN 73 G N A + G+D+ + + + V Y V S L L + Sbjct: 465 GENCPAPANYTGYDL-VDAIRRMAQQFGSVKLFKAYLEVSEQVLNARS--LTLRSELQVS 521 Query: 74 GFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVA 130 G + K + D + VD + ++ SGD F ++ Sbjct: 522 GVSLTDCP---------HNGRKDAADKMMLVDMLAHAIDHPAPRTFILISGDRDFAYALS 572 Query: 131 ALQRKVKKVTIVSTVLSDPSMASDQLRRQA----DYFMDLAYLKNEIARDPDEDKK 182 L+ + KV +V+ A L+ QA D+F D+ + I P KK Sbjct: 573 TLRLRRYKVVLVTL-----PNAHASLKAQATTCLDWFTDVVDI---ITPPPSSPKK 620 >gi|311895493|dbj|BAJ27901.1| hypothetical protein KSE_20780 [Kitasatospora setae KM-6054] Length = 395 Score = 53.9 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 31/194 (15%), Positives = 61/194 (31%), Gaps = 30/194 (15%) Query: 5 REKIALFIDGANLYASS--------KALGFDIDYRKLLKAFRSRAI------VIRAYYYT 50 ++ + +D L ++ +D+ L+ A R RA ++R Y++ Sbjct: 1 MDRCVVLVDAGYLLGAAASLLAGEPGRSRIAVDHPVLIAALRERAQAETGLPLLRIYWFD 60 Query: 51 TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110 V V + V+ +D + + E + Sbjct: 61 AAVDRRPA---------PEHRRLRVLPRVTVRLGALTRAEGRWVQKGVDAAMHAELSELA 111 Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVS-TVLSDPSMASDQLRRQADYFMDLA 167 +V+ +GDG VA+ + V + + S++L +AD L Sbjct: 112 RNHACADVVLVTGDGDLLPGVASAKEHGVAVHLWALEAADGDFNQSEELVGEADERRVLD 171 Query: 168 YLKNEIAR--DPDE 179 + I R P E Sbjct: 172 --RAWIQRWARPRE 183 >gi|256378342|ref|YP_003102002.1| hypothetical protein Amir_4302 [Actinosynnema mirum DSM 43827] gi|255922645|gb|ACU38156.1| protein of unknown function DUF88 [Actinosynnema mirum DSM 43827] Length = 281 Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats. Identities = 28/170 (16%), Positives = 58/170 (34%), Gaps = 15/170 (8%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTT---VVGDPEQQFSPL 63 +I +F DG R+ + +R + + + D + + Sbjct: 6 RIGVFYDGTWFAY-LSDFYATTHPRRARVSLDGFHDALRWHVHLAEGVPLDDCVIREAHY 64 Query: 64 HPLLDWLHYNGF-QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFS 120 GF + +A + + +DV A++ ++++ L +V+ + Sbjct: 65 VRGRIETPATGFDEALALAGITRHDLPLHGGKEKGVDVHFALETWDRAVTAGLRWVVLVT 124 Query: 121 GDGCFTTLVAALQRKVKKVTI-VSTVLSDP-------SMASDQLRRQADY 162 GD FT L A L ++ +V + V+ P + LR A Sbjct: 125 GDADFTPLAARLVKRGVRVLVPVADPRRAPQKWPENGPRTAAPLRANATD 174 >gi|188580701|ref|YP_001924146.1| hypothetical protein Mpop_1444 [Methylobacterium populi BJ001] gi|179344199|gb|ACB79611.1| conserved hypothetical protein [Methylobacterium populi BJ001] Length = 221 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 34/193 (17%), Positives = 56/193 (29%), Gaps = 40/193 (20%) Query: 7 KIALFIDGANLYASSKALGFDIDY--RKLLKA--FRSRAIVIRAYYYTTVVGDP--EQQF 60 + ++IDG NLY D+ + KLL R VI+ YYT V Sbjct: 2 RTIVYIDGFNLYFRMLQKRPDLKWVNPKLLSEQALRPENQVIQVRYYTARVSARVDPTAP 61 Query: 61 SPLHPLLDWLHYNGFQVVAK--------------VAKEFTE------------NCGRKRV 94 S + L ++ + + + K Sbjct: 62 SRQQVYFNALDTVPEVLIHQGTFLATKKFAGLVHPPQFRPQLAAQLPQPWPAVVKVHKTE 121 Query: 95 KSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFT-TLVAALQRKVKKVTIVSTVLSDPSM 151 + DV LA + + + + S D + A Q K V ++S V Sbjct: 122 EKGSDVNLASHLLLDAFRDNFDVAAVLSADSDLIEPIRIATQELGKVVGLLSPVAVPNPD 181 Query: 152 ASDQLRRQADYFM 164 + A F+ Sbjct: 182 LA-----AASSFV 189 >gi|299753946|ref|XP_001833647.2| EDA32 [Coprinopsis cinerea okayama7#130] gi|298410535|gb|EAU88192.2| EDA32 [Coprinopsis cinerea okayama7#130] Length = 491 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 24/155 (15%), Positives = 48/155 (30%), Gaps = 17/155 (10%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 K+A+F D N G + + A + + Y + + Sbjct: 2 NDRKVAIFWDYENCPVLGGCSGHQA-VKSIRGAIQPFGSIKLFKAYFAISESH----TKS 56 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFS 120 L L +G + K D + VD + +V+ S Sbjct: 57 VTLRSELQASGVSLTDTP---------HNGQKDVADKMIIVDMLLYAMDNPAPATVVLIS 107 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQ 155 GD + ++ L+ + V +++ + PS+ S Sbjct: 108 GDKDYAYAISVLRLRQYDVVVLTPPNASPSLTSHA 142 >gi|190576877|ref|YP_001966209.1| hypothetical protein pK245.entp41 [Klebsiella pneumoniae] gi|110264461|gb|ABG56824.1| hypothetical protein [Klebsiella pneumoniae] Length = 228 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 32/219 (14%), Positives = 66/219 (30%), Gaps = 44/219 (20%) Query: 7 KIALFIDGANLYASSKA--LGFDIDYRKLLKAFRSRAIV----IRAYYYTT-----VVGD 55 + A FIDG NL+ A +D LL + Y+T+ + Sbjct: 2 RTAFFIDGYNLFYGLLAGTPFKWLDLPALLTYITKIQNPASETAQVNYFTSPVLPPLATR 61 Query: 56 PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRK----------------RVKSSMD 99 ++ + L G V + + R + D Sbjct: 62 GKESAEAQDVYIRALKAKGVTVHLGRHRLNRGSAPRYLDGIPASRSDKVDVWDLEEKETD 121 Query: 100 VELAVDAFEQSE---------GLEHLVIFSGDGCFTTLVAALQRKVKKVTI---VSTVLS 147 V +A+ + + +V+ S D T + A++ ++T+ + Sbjct: 122 VNIAISMYRLLSKQQNLEADARIAQIVLVSADTDMTPALKAIKEDFPEITVGIILPHREG 181 Query: 148 DPSMASDQLRRQADYF---MDLAYLKNEI--ARDPDEDK 181 L+ +D+ + + L++ R P + K Sbjct: 182 IERGVPGSLKNHSDWIRRQVKIDELQSHQFPERVPTKKK 220 >gi|257075430|ref|ZP_05569791.1| hypothetical protein Faci_00130 [Ferroplasma acidarmanus fer1] Length = 193 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 52/154 (33%), Gaps = 18/154 (11%) Query: 3 DPREKIALFIDGANLYASSKA-LGFDID-------YRKLLKAFRSRAIVIRAYYYTTVVG 54 + K + D + L+ + K + K + + +A Y + Sbjct: 12 NDELKTVILADISCLFNAVKKSYNSHANRSTINRYIVKYMTKLKHEHPADKAIGYDSKFP 71 Query: 55 DPEQQFSPLHP----LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110 + + + L L GF+ V+ + + +DV+LA+DA E Sbjct: 72 ESFKNRRKSNNETNILHGELKNIGFETVSSPLMYRKQG----IFEKGVDVKLAMDATELI 127 Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIV 142 L+I SGDG F + R + I+ Sbjct: 128 HSGIFHRLIIVSGDGDFYPVAELAVRNHLEFIII 161 >gi|86741259|ref|YP_481659.1| hypothetical protein Francci3_2568 [Frankia sp. CcI3] gi|86568121|gb|ABD11930.1| hypothetical protein Francci3_2568 [Frankia sp. CcI3] Length = 199 Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 17/118 (14%), Positives = 33/118 (27%), Gaps = 5/118 (4%) Query: 31 RKLLKAFRSRAIVIRAYYYTTVVGDPEQ---QFSPLHPLLDWLHYNGFQVVAKVAKEFTE 87 R+++ + Y Q + W VV + + Sbjct: 30 RRIVNGRPLGGELAAVRVYRGRPSPDHQPEAARASDRQADRWTRDPRVVVVRRQLRYPKA 89 Query: 88 NCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS 143 + +DV AVD + + V+FS D + ++ V + S Sbjct: 90 WPAEPAQEKGIDVAFAVDFVRLACEGAYDVGVLFSRDTDLVPALEPVRDLGAHVEVAS 147 >gi|295697550|ref|YP_003590788.1| hypothetical protein Btus_3020 [Bacillus tusciae DSM 2912] gi|295413152|gb|ADG07644.1| hypothetical protein Btus_3020 [Bacillus tusciae DSM 2912] Length = 297 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 31/158 (19%), Positives = 58/158 (36%), Gaps = 16/158 (10%) Query: 22 KALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKV 81 + +G ++D+ +L + + + + T GD ++ L L QV + Sbjct: 21 RGVGKELDFDQLSRVIKEICSLQGHWCGTLAYGDFDRGDYGLQTRL-------LQVGIQP 73 Query: 82 AKEFTENCGRKRVKSSMDVELAVDAFE---QSEGLEHLVIFSGDGCFTTLVAALQRKVKK 138 G ++ +EL++DA E + + GD + L L + K Sbjct: 74 RHVAAREAGELHRD-AVALELSLDALESVHTLPHITDHLFVGGDISWVPLFRRLTQHGKH 132 Query: 139 VTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 + + S LR A+ F L + + EI RD Sbjct: 133 IHLCGF----QSYTHRALREWAETFTALDH-REEITRD 165 >gi|237745115|ref|ZP_04575596.1| predicted protein [Fusobacterium sp. 7_1] gi|229432344|gb|EEO42556.1| predicted protein [Fusobacterium sp. 7_1] Length = 291 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 29/189 (15%), Positives = 58/189 (30%), Gaps = 32/189 (16%) Query: 5 REKIALFIDGANLYASSKAL------GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58 + + +FID N++ + F D ++ R I+ Y + D Sbjct: 2 EKNVMIFIDYENIHKNLIKKKQNALGSFFFDKIRVWCNNRKLRILDIKVYCNFDIEDLYL 61 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSM--DVELAVDAFEQS---EGL 113 +E+ K D+++ D E+ + Sbjct: 62 SHHQSK-----------------LQEYGLETFHTANKGKNYADLKITSDLLEELYENSNI 104 Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 + +I S D T L+ ++R + V + + S L+ D L I Sbjct: 105 DGFIIISNDKDMTPLIKIIKRYKEFVYLFTNKDCYDST----LKNFPDELFILEDEVLNI 160 Query: 174 ARDPDEDKK 182 A + +K+ Sbjct: 161 ANPKESEKE 169 >gi|213965345|ref|ZP_03393541.1| conserved hypothetical protein [Corynebacterium amycolatum SK46] gi|213951961|gb|EEB63347.1| conserved hypothetical protein [Corynebacterium amycolatum SK46] Length = 227 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 38/194 (19%), Positives = 61/194 (31%), Gaps = 45/194 (23%) Query: 8 IALFI-DGANLYASSKAL-----------------GFDIDYRKLLKAFRSRAIVIRAYYY 49 AL + D NL A+ + ID + + ++ A + Sbjct: 19 TALLVWDAPNLDMGLGAILGSRPTAAHRPRFDAVGKWLIDEAERVSHKIGSDVLPEATVF 78 Query: 50 TTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ 109 T V + P ++ L GF V AK K D ++ D Sbjct: 79 TNV---NPGSAEIVRPWVEALRNVGFAVFAKP-------------KIEEDTDVDPDMIAH 122 Query: 110 S-EGLEH-----LVIFSGDG-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162 + +V+ S DG F L+ L + +VT++ AS L A Sbjct: 123 IQRRYDEGVLRSVVVASADGQNFQELLEKLASEGIRVTVIGFH----EHASWALASDAIR 178 Query: 163 FMDLAYLKNEIARD 176 F+DL +K Sbjct: 179 FVDLEEIKGVFREP 192 >gi|159121942|gb|EDP47066.1| hypothetical protein AFUB_102220 [Aspergillus fumigatus A1163] Length = 178 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 17/59 (28%), Gaps = 5/59 (8%) Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 + L +V DG FT L A ++ V D F+ L Sbjct: 11 DNLCAVVWRPRDGDFTRLAARIRESGPTVYGFGEHK-----TPRSFVAACDKFIYTENL 64 >gi|322836790|ref|YP_004210704.1| hypothetical protein AciX9_4647 [Acidobacterium sp. MP5ACTX9] gi|321165877|gb|ADW71577.1| hypothetical protein AciX9_4647 [Acidobacterium sp. MP5ACTX9] Length = 213 Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 28/208 (13%), Positives = 58/208 (27%), Gaps = 39/208 (18%) Query: 6 EKIALFIDGANLYA-SSKALGFD-IDYRKLLKAFRSR-AIVIRAYYYTTVVGDPEQQ--F 60 ++ +++DG NLY + + F ++ L+++ ++ Y+T V Sbjct: 5 KRTYVYVDGFNLYYRTLRKTKFKWLNLEALVRSLLDDENEIVCIRYFTAPVSGKFDPGVP 64 Query: 61 SPLHPLLDWLH----------YNGFQVVAKVAKE-----FTENCGRKRVKSSMDVELAVD 105 L L + + T + DV LA Sbjct: 65 VRQQRYLQALRTLPTVSIHEGNFLTRAKIRPLVHPAPDGPTHVEIWNTEEKGSDVNLATY 124 Query: 106 AFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIV------------STVLSDPSM 151 + + + V+ S D V ++ ++KK V + + Sbjct: 125 LIHDAWRDLFDVAVVLSQDTDLNEPVRIVRDEIKKSIGVIILDGKAPGKLSTFGSFVRHI 184 Query: 152 ASDQLRRQADYF---MDLAYLKNEIARD 176 L A F + + R Sbjct: 185 THADL--AASQFPDIIPFGQRGKAVERP 210 >gi|225389922|ref|ZP_03759646.1| hypothetical protein CLOSTASPAR_03672 [Clostridium asparagiforme DSM 15981] gi|225044002|gb|EEG54248.1| hypothetical protein CLOSTASPAR_03672 [Clostridium asparagiforme DSM 15981] Length = 232 Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 18/57 (31%), Gaps = 5/57 (8%) Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 + S D FT L L+ V + + R D F L + +E Sbjct: 2 FCLVSSDSDFTKLAQRLRESGMFVMGIGEQKTPKP-----FRTACDTFKLLEIISSE 53 >gi|328768035|gb|EGF78082.1| hypothetical protein BATDEDRAFT_26780 [Batrachochytrium dendrobatidis JAM81] Length = 491 Score = 52.3 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 31/159 (19%), Positives = 53/159 (33%), Gaps = 27/159 (16%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 +A+F D N + G+ + + + K+ R + Y V + Sbjct: 151 PSVAIFWDFENCAPPAAVPGY-VAVQNIRKSLRQFGPI----AYLEVRETF------IKS 199 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGD 122 + L +G V+ K + D + VD + +V+ SGD Sbjct: 200 MRSELQSSGCSVIDTP---------HNGRKDAADKMIMVDMLSYIIDTPAPATIVLISGD 250 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 F +A LQ + V ++ AS LR QA Sbjct: 251 RDFLYALAVLQNRGYNVVLIVPNRG----ASPILRAQAS 285 >gi|119489617|ref|ZP_01622377.1| hypothetical protein L8106_08411 [Lyngbya sp. PCC 8106] gi|119454529|gb|EAW35677.1| hypothetical protein L8106_08411 [Lyngbya sp. PCC 8106] Length = 257 Score = 51.6 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 61/168 (36%), Gaps = 30/168 (17%) Query: 9 ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68 A+F D N+ D LLK R V + Y+ + + Sbjct: 16 AIFWDYENVP----QFNIASD---LLKFSHQRGNVGASNAYSCNLD---------KKAKN 59 Query: 69 WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA---FEQSEGLEHLVIFSGDGCF 125 L GF+ + K+ K+++D ++A+D + + + +++ +GD Sbjct: 60 HLQKQGFECIQV-------ENPNKKNKNAVDFQIAIDCFKPIKTNSYPDEIILVTGDCYS 112 Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173 + L+ + +K+ + + L+++ D F + L + Sbjct: 113 LIVQENLKSENRKLIVFA----RRGSDCHSLKKEVDEFYYIDELPKLV 156 >gi|156744147|ref|YP_001434276.1| hypothetical protein Rcas_4231 [Roseiflexus castenholzii DSM 13941] gi|156235475|gb|ABU60258.1| hypothetical protein Rcas_4231 [Roseiflexus castenholzii DSM 13941] Length = 206 Score = 51.6 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 4/64 (6%) Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170 GL+ VI SGDG F L L K V + S + + D F+ + + Sbjct: 13 PGLDVFVIVSGDGGFAALAKKLHEYGKTVIGCA----YRSAVNKTFQAVCDEFVWITDPE 68 Query: 171 NEIA 174 ++ Sbjct: 69 EKVQ 72 >gi|67921187|ref|ZP_00514706.1| hypothetical protein CwatDRAFT_5542 [Crocosphaera watsonii WH 8501] gi|67857304|gb|EAM52544.1| hypothetical protein CwatDRAFT_5542 [Crocosphaera watsonii WH 8501] Length = 76 Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 16/35 (45%), Positives = 25/35 (71%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKA 36 + R ++A+FIDG+NL+ ++ LG +IDY KLL Sbjct: 42 LENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCR 76 >gi|254482849|ref|ZP_05096086.1| hypothetical protein GPB2148_1333 [marine gamma proteobacterium HTCC2148] gi|214036930|gb|EEB77600.1| hypothetical protein GPB2148_1333 [marine gamma proteobacterium HTCC2148] Length = 64 Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 5 REKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58 EKI++F+D N+Y + + + DY + +I AY Y T GD +Q Sbjct: 1 MEKISIFVDVQNIYYTCRQTYQRNFDYNRFWVEITQGRELIGAYAYATDRGDAKQ 55 >gi|120406915|ref|YP_956744.1| hypothetical protein Mvan_5982 [Mycobacterium vanbaalenii PYR-1] gi|119959733|gb|ABM16738.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length = 175 Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 31/159 (19%), Positives = 48/159 (30%), Gaps = 28/159 (17%) Query: 12 IDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLH 71 +D NL +G + + + + +I YT + + L L Sbjct: 34 VDLENL------VGGRVSSSAVREVWSEFGEIIDT-CYTDLTTVAVSRQHAATAFL-ALP 85 Query: 72 YNGFQVVAKVAKEFTENCGRKRVKSSMDVELA--VDAFEQSEGLEHLVIFSGDGCFTTLV 129 N +V+ D+ L VD + +VI SGD F L Sbjct: 86 ANLHRVI------------GANGPDGADIALIDSVDIGWVAANFGQVVIASGDHIFAPLA 133 Query: 130 AALQRKVKKVT-IVSTVLSDPSMASDQLRRQADYFMDLA 167 LQR V ++ S L R + LA Sbjct: 134 RRLQRNGLHVIQVIG-----RGACSAALYRACNEQKYLA 167 >gi|288917691|ref|ZP_06412054.1| hypothetical protein FrEUN1fDRAFT_1749 [Frankia sp. EUN1f] gi|288350906|gb|EFC85120.1| hypothetical protein FrEUN1fDRAFT_1749 [Frankia sp. EUN1f] Length = 108 Score = 51.2 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 32/94 (34%), Gaps = 3/94 (3%) Query: 77 VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQR 134 VV + + + +DV LAVD + + V+FS D + ++ Sbjct: 3 VVRRQLRYPKAWPAEPAQEKGIDVALAVDFVRLACESAYDVGVLFSRDTDLVPALETVRD 62 Query: 135 KVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 V + S + D +++D+ Sbjct: 63 LGAHVEVASWKGTSRLRFPDSQLPWC-HYLDVDD 95 >gi|83591783|ref|YP_425535.1| hypothetical protein Rru_A0443 [Rhodospirillum rubrum ATCC 11170] gi|83574697|gb|ABC21248.1| hypothetical protein Rru_A0443 [Rhodospirillum rubrum ATCC 11170] Length = 216 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 22/165 (13%), Positives = 44/165 (26%), Gaps = 31/165 (18%) Query: 7 KIALFIDGANL-------------------YASSKALGFDIDYR--------KLLKAFRS 39 + +F+D N Y +K G+ +D ++ +F Sbjct: 21 RCMIFVDFWNFTLSMKTVEEAFPCDWKALPYVLTKEAGYQVDPSASTEYRGMRVYGSFDG 80 Query: 40 RAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCG--RKRVKSS 97 + + T + + + KV + R + Sbjct: 81 KGDANLRKWVKTKLETFPGVSIKFVDRQKKMSGPKCPICYKVIGKCPYCGNDMRGTEEKG 140 Query: 98 MDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVT 140 +D + D + + V+ S D F + L K KV Sbjct: 141 VDTAIVTDMISLAWENAFDIAVLVSADRDFVPVAEYLHTKGIKVI 185 >gi|260804479|ref|XP_002597115.1| hypothetical protein BRAFLDRAFT_76354 [Branchiostoma floridae] gi|229282378|gb|EEN53127.1| hypothetical protein BRAFLDRAFT_76354 [Branchiostoma floridae] Length = 555 Score = 50.8 bits (120), Expect = 9e-05, Method: Composition-based stats. Identities = 27/148 (18%), Positives = 56/148 (37%), Gaps = 35/148 (23%) Query: 10 LFIDGANLYASSKALGFD-------------IDYRKLLKAFRSRAI-----VIRAYYYTT 51 +F+D +N++ + K I+Y L S+ + A Y + Sbjct: 165 VFVDDSNIWIAGKRAAVKQKDLACDEDPRLRIEYGNFLDVLSSKERQTSSVIKIANMYGS 224 Query: 52 VVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE 111 + + + D + G++V KE ++ G+ + ++D +L VDA + Sbjct: 225 IPPPNDSLW-------DKMKEKGWKV---DLKERSKITGK---EKAVDAQLMVDAISFAA 271 Query: 112 GLEH----LVIFSGDGCFTTLVAALQRK 135 + +V+ SGD F L+ + Sbjct: 272 QRKDAGGTIVLISGDKDFLPLINKVLEY 299 >gi|242209571|ref|XP_002470632.1| predicted protein [Postia placenta Mad-698-R] gi|220730311|gb|EED84170.1| predicted protein [Postia placenta Mad-698-R] Length = 456 Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 47/141 (33%), Gaps = 16/141 (11%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 + +A+F D N S A G I + + R V Y+ + P + L Sbjct: 5 DSVAIFWDYENCALPSNATGSII-VNNIAQLARRYGSVKSFRAYSELPEQPSPKNIALRS 63 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGD 122 L G V+ K D + VD + +++ +GD Sbjct: 64 DLQLC---GVSVIDCP---------HNGGKDVADKMMIVDMMAFAIDTPAPATIILITGD 111 Query: 123 GCFTTLVAALQRKVKKVTIVS 143 F V+ L + ++ +++ Sbjct: 112 RDFVYAVSILSLRQYRLVVLA 132 >gi|121999162|ref|YP_001003949.1| hypothetical protein Hhal_2384 [Halorhodospira halophila SL1] gi|121590567|gb|ABM63147.1| conserved hypothetical protein [Halorhodospira halophila SL1] Length = 218 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 48/158 (30%), Gaps = 29/158 (18%) Query: 7 KIALFIDGANLYASS--KALGFDIDYRKLLK--AFRSRAIVIRAYYYTTVVG----DPEQ 58 + +++DG NLY K +D L + A + ++ YYT V D + Sbjct: 2 RTVVYVDGYNLYYGLLRKTAFKWLDLVVLFRDHALDPQVDLVEVRYYTAPVLGRMCDDPK 61 Query: 59 QFSPLHPLLDWLHYN---------GFQVVAKVAKEFTENCGRK----------RVKSSMD 99 L L G + K + + + D Sbjct: 62 SPQRQRRYLQALRTMHPERLSIIEGKIIATTPFKRLAQPIPERPDLERVQVLDFHEKKTD 121 Query: 100 VELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRK 135 V LA D S E V+ S D +A ++R Sbjct: 122 VNLAADLIAGSWVGSYEQAVVCSNDTDLDAALATVRRY 159 >gi|319790520|ref|YP_004152153.1| hypothetical protein Theam_1553 [Thermovibrio ammonificans HB-1] gi|317115022|gb|ADU97512.1| hypothetical protein Theam_1553 [Thermovibrio ammonificans HB-1] Length = 355 Score = 50.0 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 24/175 (13%), Positives = 57/175 (32%), Gaps = 31/175 (17%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAI-------------VIRAY 47 M + R K A+++D N+Y + ++ + + K + Sbjct: 1 MEERRIKTAIYVDFDNIYGALLSI-YQMAPGKDRNELSPFQAQLLKLLIPEFLKLLKNGI 59 Query: 48 YYTTVVGDPEQQFSPLHPLLDWLH------------YNGFQVVAKVAKEFTENCGRKRVK 95 +T D Q + ++ + + +V A F + + + K Sbjct: 60 IFTGGGEDIYQDSRCIKIFAEYHNLPYQARISPPLTHIVQEVGAVTHNPFIPSSKKGKGK 119 Query: 96 SSMDVELAV----DAFEQSEGLEHLVIFSGDGCFTTLVAALQRK-VKKVTIVSTV 145 ++ DV L + D + ++ +VI + D + L+ + + S Sbjct: 120 NAADVALVLSVIEDLLIKRIPVDAVVIATCDIDLYPAIRWLKEHTGLSIILASFE 174 >gi|71004032|ref|XP_756682.1| hypothetical protein UM00535.1 [Ustilago maydis 521] gi|46095754|gb|EAK80987.1| hypothetical protein UM00535.1 [Ustilago maydis 521] Length = 847 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 22/145 (15%), Positives = 48/145 (33%), Gaps = 15/145 (10%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSR--AIVIRAYYYTTVVGDPEQQFSPLHP 65 IA+F D N + + G + + A ++ ++ Y + + + + Sbjct: 90 IAIFWDVDNCAPPTGSSGRSVAL-AVRTAIQNFEIGPIVSFKAYLELSSETQAPNAAQVQ 148 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGD 122 L L G ++ + K D + D + +V+ SGD Sbjct: 149 LRSELQGCGVSLIDTP---------KSGRKDVADKMMITDLLAYAIDQPAPATVVLISGD 199 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLS 147 F + L+ + V +V+ + Sbjct: 200 RDFAYPLGILRNRGYNVVLVTPPIG 224 >gi|189016716|ref|YP_001711755.1| hypothetical protein CMS_pCSL0024 [Clavibacter michiganensis subsp. sepedonicus] gi|167728887|emb|CAQ03269.1| hypothetical protein pCSL0024 [Clavibacter michiganensis subsp. sepedonicus] Length = 195 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 23/164 (14%), Positives = 48/164 (29%), Gaps = 22/164 (13%) Query: 10 LFIDGANLYASSKA---------LGFDIDYRKLLKAFRSRA--------IVIRAYYYTTV 52 LFID NL+ S+ I K + + + + Y + Sbjct: 6 LFIDYQNLHFSAWETFTSYGSAVYDSLIHPGKFGDQVLAARAARNFPELELTKIHVYRGL 65 Query: 53 VG---DPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ 109 +P Q +W + + K + + +DV LA+ + Sbjct: 66 PSRKREPGQHARVQRQASNWTRDPRVVMSLRALKYPRDWPDEPSQEKGIDVLLAIQVVQA 125 Query: 110 S--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151 S + L++ + D + +Q ++T + Sbjct: 126 SIESAADTLIVSTRDTDILPALELVQSTGNTALELATWKGQSEL 169 >gi|302692514|ref|XP_003035936.1| hypothetical protein SCHCODRAFT_105537 [Schizophyllum commune H4-8] gi|300109632|gb|EFJ01034.1| hypothetical protein SCHCODRAFT_105537 [Schizophyllum commune H4-8] Length = 837 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 27/156 (17%), Positives = 49/156 (31%), Gaps = 18/156 (11%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 + +F D N S+ G++I R + + V Y Q + + Sbjct: 7 VGIFWDFENCRYSAGRSGYEI-ARAIEQVALEYGTVSDFNAYLD-----MQFCALPATMR 60 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGC 124 L +G +V K +D L D + L++ SGD Sbjct: 61 SELQSSGVALVDCP---------HNGQKDVVDQMLQTDMLAYALDHPAPATLILISGDRD 111 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160 F V+ L+R+ +V ++ P + Sbjct: 112 FAYTVSVLRRRRYEVVLLCHSQPGPHKSLAWQVSAC 147 >gi|83815599|ref|YP_445763.1| hypothetical protein SRU_1643 [Salinibacter ruber DSM 13855] gi|83756993|gb|ABC45106.1| hypothetical protein SRU_1643 [Salinibacter ruber DSM 13855] Length = 369 Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 68/189 (35%), Gaps = 29/189 (15%) Query: 3 DPREKIALFIDGANLYASSK----------ALGFDIDYRKLLKAFRSRAIVIRAYYYTTV 52 PR+ A+F+D NLY+ K A +I + ++ + Y Sbjct: 11 PPRQ-AAMFVDYDNLYSILKSQSGRDRSTSAYAEEI-FEEVRRYLEEGDDTPTIYGRAYG 68 Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVD---AFEQ 109 D + LH G + A ++ +V L +D A + Sbjct: 69 TFDTLLDENDAPVP-SALHREGINPIHVPA---------GMQDNTSEVRLTLDVTQALTR 118 Query: 110 SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD-YFMDLAY 168 L+ +VI +G+ + LV ++ + + + + +P +D D ++D Sbjct: 119 RSDLQTVVIITGNRPYLPLVRWIREQGCRPLVAAV---NPPQTADTPSFAEDSRYLDARN 175 Query: 169 LKNEIARDP 177 L +E +R+ Sbjct: 176 LLSEESRED 184 >gi|240141954|ref|YP_002966464.1| hypothetical protein MexAM1_META2p0215 [Methylobacterium extorquens AM1] gi|254559795|ref|YP_003066890.1| hypothetical protein METDI1275 [Methylobacterium extorquens DM4] gi|240011898|gb|ACS43123.1| Hypothetical protein MexAM1_META2p0215 [Methylobacterium extorquens AM1] gi|254267073|emb|CAX22886.1| hypothetical protein METDI1275 [Methylobacterium extorquens DM4] Length = 224 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 25/174 (14%), Positives = 56/174 (32%), Gaps = 17/174 (9%) Query: 17 LYASSKALGFDI----DYRKLLKAFRSRA--IVIRAYYYTTVVGDPEQQFSPLHPLLDWL 70 +Y S LG ++ KL ++ R ++R + T + L+ L Sbjct: 1 MYHSVNDLGESFLKWCNFWKLGESIIPRQSEELVRVVFCTAYYPGDHSKKIRHERLVRAL 60 Query: 71 HYNGFQVVAKVA-----KEFTENCGR-KRVKSSMDVELAVDAFEQS--EGLEHLVIFSGD 122 G + + K K + + D+ LA+ ++ + + ++ + + D Sbjct: 61 KLVGVETILGHFSKEDAKCRDCGSAWQKPTEKATDINLALSVYDDAVQDAMDTAYLLTAD 120 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 ++ K +VS + + L +A + I R Sbjct: 121 TDQAATAELFAKRFPKKKLVSVSPPGRTHSQHILSHTPHK---IALNREHIERA 171 >gi|294507660|ref|YP_003571718.1| hypothetical protein SRM_01845 [Salinibacter ruber M8] gi|294343988|emb|CBH24766.1| conserved hypothetical protein [Salinibacter ruber M8] Length = 369 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 68/189 (35%), Gaps = 29/189 (15%) Query: 3 DPREKIALFIDGANLYASSK----------ALGFDIDYRKLLKAFRSRAIVIRAYYYTTV 52 PR+ A+F+D NLY+ K A +I + ++ + Y Sbjct: 11 PPRQ-AAMFVDYDNLYSILKSQSGRDRSTSAYAEEI-FEEVRRYLEEGDDTPTIYGRAYG 68 Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVD---AFEQ 109 D + LH G + A ++ +V L +D A + Sbjct: 69 TFDTLLDENDAPVP-SALHREGINPIHVPA---------GMQDNTSEVRLTLDVTQALTR 118 Query: 110 SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD-YFMDLAY 168 L+ +VI +G+ + LV ++ + + + + +P +D D ++D Sbjct: 119 RSDLQTVVIITGNRPYLPLVRWIREQGCRPLVAAV---NPPQTADTPSFAEDSRYLDARN 175 Query: 169 LKNEIARDP 177 L +E +R+ Sbjct: 176 LLSEESRED 184 >gi|323508074|emb|CBQ67945.1| conserved hypothetical protein [Sporisorium reilianum] Length = 856 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 23/150 (15%), Positives = 50/150 (33%), Gaps = 15/150 (10%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSR--AIVIRAYYYTTVVGDPEQQF 60 + E IA+F D N + + G + + A ++ ++ Y + + + Sbjct: 86 EDTEPIAIFWDVDNCAPPTGSSGRSVAL-AVRSAIQNLDVGPIVSFKAYLELSSETQAPN 144 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLV 117 + L L G ++ + K D + D + +V Sbjct: 145 AAQVQLRSELQGCGVSLIDTP---------KSGRKDVADKMMITDLLAYAIDQPAPATVV 195 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLS 147 + SGD F + L+ + V +V+ + Sbjct: 196 LISGDRDFAYPLGILRNRGYNVVLVTPPIG 225 >gi|296125472|ref|YP_003632724.1| hypothetical protein Bmur_0422 [Brachyspira murdochii DSM 12563] gi|296017288|gb|ADG70525.1| protein of unknown function DUF88 [Brachyspira murdochii DSM 12563] Length = 455 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 63/160 (39%), Gaps = 19/160 (11%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 +KI ++ID N+ + L F ++ + +LK YY + D + FS Sbjct: 1 MKKIGIYIDLENI----RYLDFHVNLKSMLKNILD--------YYKEQLKDEDIVFSIKK 48 Query: 65 PLLDWLHYNGFQVVAKVAKE-FTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFS 120 D + + + K+ K+ D++ ++DAFE + ++ ++ + Sbjct: 49 AYGDSKSIKKYAKHLRDLHIDIIHSVPFKKAKNMADMKSSLDAFEDFIIYKKIDIIIFVT 108 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160 D ++ ++ L R V++V+T + + Sbjct: 109 KDVDYSIVMDKLMRHGCIVSMVTTSDNFEKNI---FQNAC 145 >gi|226363405|ref|YP_002781187.1| hypothetical protein ROP_39950 [Rhodococcus opacus B4] gi|226241894|dbj|BAH52242.1| hypothetical protein [Rhodococcus opacus B4] Length = 208 Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 15/152 (9%), Positives = 48/152 (31%), Gaps = 25/152 (16%) Query: 6 EKIALFIDGANLYASSK---ALGFDIDYRKLLKAFRSRAIVIRAYY-------------- 48 +++A+ +D N++ +++ + LL +++A Sbjct: 5 QRVAVVVDYQNMHLTARGKFTPEGTPTHESLLHPLLLAQQILKARANAKGADTPPADIAK 64 Query: 49 ---YTTVVG---DPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVEL 102 Y + D +W + +V + + + + +DV + Sbjct: 65 VEVYRGLPSNEHDSTSYRRSQAQRAEWTRDSRVEVTYRPLRYRYVHNILTPQEKGVDVLV 124 Query: 103 AVDAFEQ--SEGLEHLVIFSGDGCFTTLVAAL 132 A++ + S + +++ + D + Sbjct: 125 ALNFVQAVVSGEYDVVILAAHDTDLEPALEMA 156 >gi|171692967|ref|XP_001911408.1| hypothetical protein [Podospora anserina S mat+] gi|170946432|emb|CAP73233.1| unnamed protein product [Podospora anserina S mat+] Length = 465 Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 18/170 (10%), Positives = 49/170 (28%), Gaps = 26/170 (15%) Query: 1 MFDPREKIALFIDGANLYASSKAL------------------GFDIDYRKLLKAFRSRAI 42 M ++ LF+D +N++ ++ I+ +L+ I Sbjct: 1 MDADNDECLLFVDDSNVWIEAQKFAASGNSHMPKLTDGDQDPRLRINIGRLVNTLCDGRI 60 Query: 43 VIRAYYYTTVVGDPEQQFSPLHP--LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDV 100 ++Y Y + + + ++ G K + + ++D+ Sbjct: 61 QRQSYIYGSRPPPNDLVWDQYKKCSFKTKIYDRGANGREKEV---DNSMSADMTEEAVDL 117 Query: 101 ELAV---DAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLS 147 A E+ ++ +GD + + +V + Sbjct: 118 RAVAKFDQAVEERRKRTVFIVITGDRDMLPAIRKVLGCGIRVELWGWNSG 167 >gi|119887743|gb|ABM05923.1| NicB [Pseudomonas putida] Length = 312 Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 35/201 (17%), Positives = 60/201 (29%), Gaps = 47/201 (23%) Query: 7 KIALFIDGANLYASSKA--LGFDIDYRKLLKA-------FRSRAIVIRAY--------YY 49 + ++IDG N Y +D L + IRA+ Y Sbjct: 11 RTRIYIDGYNFYYGCLRGTPYKWLDLLPLFEKHILPSILVTDNHGQIRAWRLLESPSIKY 70 Query: 50 --------TTVVGDPEQQFSPLHPLLDWLHYNGFQVV-------------------AKVA 82 GD + H L LH +++ K Sbjct: 71 FTAKIIESVARAGDSVSSQARYHTALRKLHDGRIELIEGYYAVNKMKVKIVDPENPDKAP 130 Query: 83 KEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRK-VKKV 139 +E E K + DV LA+ A+ S ++H VI + D + ++ ++ Sbjct: 131 RECREIQAWKVEEKQSDVNLALQAYHDSITGQVDHAVIVTNDTDIAPALQMIRAHTDVRI 190 Query: 140 TIVSTVLSDPSMASDQLRRQA 160 +V A+ L + A Sbjct: 191 GVVVPTSGQNRSANTDLIKFA 211 >gi|16519880|ref|NP_444000.1| hypothetical 23.5 kDa protein [Sinorhizobium fredii NGR234] gi|2496724|sp|P55589|Y4OD_RHISN RecName: Full=Uncharacterized protein y4oD gi|2182554|gb|AAB91797.1| hypothetical 23.5 kDa protein [Sinorhizobium fredii NGR234] Length = 214 Score = 48.1 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 30/82 (36%), Gaps = 3/82 (3%) Query: 82 AKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKV 139 K + + +D + D E + + +V+ SGD V Q +V Sbjct: 14 IKLRLGFINGQGQQKGVDSLIVTDLIELARQRAISEVVLLSGDEDVRVGVQIAQNYGVRV 73 Query: 140 TIVSTVLSDPSMASDQLRRQAD 161 ++ + S LR++AD Sbjct: 74 HLLG-IHPARGSQSPTLRQEAD 94 >gi|148905892|gb|ABR16108.1| unknown [Picea sitchensis] Length = 593 Score = 48.1 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 53/163 (32%), Gaps = 25/163 (15%) Query: 8 IALFIDGAN--LYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 +A+ D N + A +A + R L+ ++ A + + GD Sbjct: 45 VAILWDIENCPVPAEVRAEDVASNIRVALRL---HPVIKGAVTFFSAYGDFNN---FPRK 98 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGD 122 L + G ++ K + D + VD F + +++ SGD Sbjct: 99 LREGCQRTGVNLIDVP----------SGKKDAADKAILVDMFLFALDNPPPSTILLISGD 148 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165 F + L ++ V +++ S L A F+ Sbjct: 149 VDFAPALHKLGQRGYTV-VLAIPAGVG--VSSALCN-AGRFVW 187 >gi|300702658|ref|YP_003744258.1| hypothetical protein RCFBP_10301 [Ralstonia solanacearum CFBP2957] gi|299070319|emb|CBJ41611.1| conserved protein of unknown function [Ralstonia solanacearum CFBP2957] Length = 309 Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats. Identities = 27/199 (13%), Positives = 57/199 (28%), Gaps = 45/199 (22%) Query: 7 KIALFIDGANLYASSKA--LGFDIDYRKLLKA-------FRSRAIVIR------------ 45 + +++DG N Y +D KL + +R Sbjct: 12 RTRVYVDGYNFYYGCLKGTHHKWLDLYKLFQEHVLPSALIERDGQYVRSELLTEAVQFFT 71 Query: 46 -----------------AYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQV-VAKVAKEFTE 87 A Y+T + + + + ++ AK + Sbjct: 72 ATIIERAAKAHDSVSSQARYHTALRKRHDGRIRIVEGYYSVAKARAPRIDAAKPDAWPRD 131 Query: 88 N---CGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRK-VKKVTI 141 + + DV LA+ A+ + ++H+VI S D + ++ V + Sbjct: 132 CERVPIWRLEEKQTDVNLALHAYHDAMTAQVDHVVIASNDTDLVPALRMIREHTSVTVGL 191 Query: 142 VSTVLSDPSMASDQLRRQA 160 V ++ L + A Sbjct: 192 VIPTRDSERRPNEDLAKYA 210 >gi|302692534|ref|XP_003035946.1| hypothetical protein SCHCODRAFT_232516 [Schizophyllum commune H4-8] gi|300109642|gb|EFJ01044.1| hypothetical protein SCHCODRAFT_232516 [Schizophyllum commune H4-8] Length = 1064 Score = 47.7 bits (112), Expect = 7e-04, Method: Composition-based stats. Identities = 28/165 (16%), Positives = 51/165 (30%), Gaps = 33/165 (20%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 + + D N+ L K + V R D Q+ ++ Sbjct: 11 VGILWDYENV--------------PLPKGYSGYGAVQRIR-------DIALQYGTINLFK 49 Query: 68 DWLHYNGFQVVAKVAKEFTE----NCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFS 120 ++ G + + + + K D L VD + +V+ S Sbjct: 50 AYMEVKGHATNVRAELQISGVSLTDTPHVGYKDVADQMLQVDMLVFAWDNPPPTTIVLIS 109 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165 GD F A L+ + ++ I+S + LR QA + D Sbjct: 110 GDRDFAYAAAILRNRNFRIVIISPAQAV-----TCLREQATHVYD 149 >gi|227488269|ref|ZP_03918585.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227091839|gb|EEI27151.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51867] Length = 237 Score = 47.7 bits (112), Expect = 8e-04, Method: Composition-based stats. Identities = 26/208 (12%), Positives = 59/208 (28%), Gaps = 60/208 (28%) Query: 8 IALFIDGANLYASSKALGFDID------YRKLLKAFRSR-----AIVIRAYYYTTVVGDP 56 A+ IDG + +A D ++L+ R A + R +YY + Sbjct: 24 TAILIDGG--FYRRRAYSLFGDKDPVARAKELVAYARRHIEKSNANLYRIFYYDCPPSEK 81 Query: 57 ---------------EQQFSPLHPLLDWLHY---------------NGFQVVAKVAKEFT 86 Q+ + L + NG+ + + K+ Sbjct: 82 VLYHPLLKKQVNLAKTPQYKWSITFFEELIHKRKVALRRGEELRTQNGYLLKPETVKKLC 141 Query: 87 -----------ENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQ 133 ++ + +D+ + +D ++ + +V+ +GD F + Sbjct: 142 AGKIQVKDLTEDDFSLDINQKGVDMRIGLDIASLAQQGIVNQIVMITGDSDFVPAAKHAR 201 Query: 134 RKVKKVTIVSTVLSDPSMASDQLRRQAD 161 R + + + L D Sbjct: 202 RMGIDFIL----DPMWANIAPSLSEHVD 225 >gi|296130250|ref|YP_003637500.1| hypothetical protein Cfla_2411 [Cellulomonas flavigena DSM 20109] gi|296022065|gb|ADG75301.1| conserved hypothetical protein [Cellulomonas flavigena DSM 20109] Length = 187 Score = 47.7 bits (112), Expect = 8e-04, Method: Composition-based stats. Identities = 22/161 (13%), Positives = 54/161 (33%), Gaps = 27/161 (16%) Query: 10 LFIDGANLYASSKA--------LGFDIDYRKLLKAFRS-RAIVIRAYYYTTVVGDPEQQF 60 L +DG N+ A+ + + ++L + ++A ++ Sbjct: 9 LLVDGENIDATLGSSILGGRPTPEQRPRWERVLTFAQQAWGQPVKALFFLNASNGTLP-- 66 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 + L GF + + + + +D+ + ++ +++ S Sbjct: 67 ---MSFVQALTAIGFVPIPLSGESY---------EKVVDIGIKRTLEAIADRDGDVLLAS 114 Query: 121 GDGCFTTLVAALQRKVKKVTIVST----VLSDPSMASDQLR 157 DG F VA L ++V +++ S + + LR Sbjct: 115 HDGDFAPEVAQLVDAGRQVGLLAFREFTSQSLAGLTARGLR 155 >gi|227542867|ref|ZP_03972916.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51866] gi|227181372|gb|EEI62344.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51866] Length = 182 Score = 47.3 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 10/98 (10%), Positives = 35/98 (35%), Gaps = 12/98 (12%) Query: 87 ENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVST 144 ++ + +D+ + +D ++ + +V+ +GD F +R + Sbjct: 67 DDFSLDINQKGVDMRIGLDIASLAQQGIVNQIVMITGDSDFVPAAKHARRMGIDFIL--- 123 Query: 145 VLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182 + + L D +++ + ++P+ + Sbjct: 124 -DPMWANIAPSLSEHVD------GVRSCVPKEPNAQNE 154 >gi|168020521|ref|XP_001762791.1| predicted protein [Physcomitrella patens subsp. patens] gi|162685900|gb|EDQ72292.1| predicted protein [Physcomitrella patens subsp. patens] Length = 474 Score = 47.3 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 24/163 (14%), Positives = 45/163 (27%), Gaps = 26/163 (15%) Query: 8 IALFIDGAN--LYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 +A+ D N + A + R L+ V Y Sbjct: 18 VAILWDIENCPVPGEVNAEDVAGNIRIALREHPHVGAVTMFSAYGDFN-------HFPRK 70 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGD 122 + + G ++ K + D + VD F + + + +GD Sbjct: 71 VREGCQRTGVNLIDVP----------NGKKDAADKAILVDMFLFALDNPPPSTIFLITGD 120 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165 F + L ++ V ++ S LR A F+ Sbjct: 121 VDFAPALHKLGQRG-YVVVLVIPDGVG--VSSALR-GAGRFVY 159 >gi|226326984|ref|ZP_03802502.1| hypothetical protein PROPEN_00844 [Proteus penneri ATCC 35198] gi|225204821|gb|EEG87175.1| hypothetical protein PROPEN_00844 [Proteus penneri ATCC 35198] Length = 264 Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 14/101 (13%), Positives = 35/101 (34%), Gaps = 9/101 (8%) Query: 86 TENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVS 143 + + +D++L VD ++ ++ +V+F+GD F + + Sbjct: 149 NNDFYYSIRQKGVDIKLGVDITSIAQKKLVDKIVLFAGDSDFVPAAKLARTNGIDFVL-- 206 Query: 144 TVLSDPSMASDQLRRQADYFMDLA---YLKNEIARDPDEDK 181 + + + L D + LK+ + + P Sbjct: 207 --DALRNNIAPSLHEHIDGLVSYDLVAILKDILGKPPTTTP 245 >gi|224103613|ref|XP_002313122.1| predicted protein [Populus trichocarpa] gi|222849530|gb|EEE87077.1| predicted protein [Populus trichocarpa] Length = 504 Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats. Identities = 24/138 (17%), Positives = 47/138 (34%), Gaps = 17/138 (12%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +A+ D N S D+ + A + ++ A + GD S L Sbjct: 20 VAILWDIENCPVPSDVRSEDV-AGNIRMALQVHPVIKGAVMMFSAYGDFN---SFPRRLR 75 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGC 124 + G +++ K + D + VD F + +++ SGD Sbjct: 76 EGCQRTGVKLIDVP----------NGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVD 125 Query: 125 FTTLVAALQRKVKKVTIV 142 F+ + L ++ V +V Sbjct: 126 FSPALHILGQRGYTVILV 143 >gi|227505745|ref|ZP_03935794.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940] gi|227197713|gb|EEI77761.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940] Length = 198 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 43/115 (37%), Gaps = 14/115 (12%) Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 + P ++ + GF V AK + +D ++ E + L+ +++ S D Sbjct: 68 IRPWVEAIRNVGFAVFAKP---------KLHEDDDVDPDMIAYIQENRDNLDSVIVASAD 118 Query: 123 G-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 G F +L+ L + K V ++ + + F+DL ++ Sbjct: 119 GQNFQSLLEELAAEGKPVCVLGFHEHASWAVTHEDI----EFVDLEDIEGVFREP 169 >gi|254252774|ref|ZP_04946092.1| hypothetical protein BDAG_02014 [Burkholderia dolosa AUO158] gi|124895383|gb|EAY69263.1| hypothetical protein BDAG_02014 [Burkholderia dolosa AUO158] Length = 211 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 15/104 (14%), Positives = 35/104 (33%), Gaps = 18/104 (17%) Query: 1 MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 M P + + A+F D N+ + + D + +L+ + ++ Y Sbjct: 1 MALPLDNVSMAVFCDFENVALGVRDAKYEKFDIKPVLERLLLKGSIVVKKAYC------- 53 Query: 58 QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVE 101 + +H F+++ R+ K+S D+ Sbjct: 54 -DWDRYKGFKAAMHEASFELIEIPHV-------RQSGKNSADIR 89 >gi|302692518|ref|XP_003035938.1| hypothetical protein SCHCODRAFT_105540 [Schizophyllum commune H4-8] gi|300109634|gb|EFJ01036.1| hypothetical protein SCHCODRAFT_105540 [Schizophyllum commune H4-8] Length = 710 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 54/161 (33%), Gaps = 21/161 (13%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 + +F D N S GFD+ + + + + + Y + QQ + + Sbjct: 4 VGIFWDYENCQFMSGCSGFDV-AKNIERVALAHGPIASFNAYLDL-----QQCAVPASMR 57 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGC 124 L G +V K +D L D + +V+ SGD Sbjct: 58 SELQSTGVALVDCP---------HNGQKDVVDQMLQTDMLVFALDHPAPATIVLISGDRD 108 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165 F + + L+R++ V ++ P L +Q +D Sbjct: 109 FAYVASILRRRMYNVVLICHSTPGPH---KSLLQQVSTHID 146 >gi|257486916|ref|ZP_05640957.1| hypothetical protein PsyrptA_26815 [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 229 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 49/165 (29%), Gaps = 37/165 (22%) Query: 7 KIALFIDGANLYASSKA--LGFDIDYRKLLKAFRS----RAIVIRAYYYTTVVGDPEQQF 60 + A F+DG NL+ A +D LL + ++T+ V Sbjct: 2 RTACFVDGYNLFYGLLAGTKYKWLDLPSLLAHILRVEHPENTLASVSFFTSGVKPSLASR 61 Query: 61 -----SPLHPLLDWLHYNGFQV-----------------VAKVAKEFTENCGRKRVKSSM 98 L L G V + A + K + Sbjct: 62 GILSKEAQDSYLRALIARGVSVNYGRHQLESGKAPRFVDKSTPASRLDQVDIWKLEEKET 121 Query: 99 DVELAVDAFEQS---------EGLEHLVIFSGDGCFTTLVAALQR 134 DV +A+ + + + L+ LV+ S D T + AL+ Sbjct: 122 DVHIAISMYRLAARQAGLMQEDRLQQLVLVSADTDMTPALRALRE 166 >gi|91200595|emb|CAJ73644.1| hypothetical protein kuste2892 [Candidatus Kuenenia stuttgartiensis] Length = 165 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 22/125 (17%), Positives = 49/125 (39%), Gaps = 18/125 (14%) Query: 44 IRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELA 103 IR Y++++ G + + L L GF+ V K+ + + +D+ L Sbjct: 34 IRRYWFSSYKGSEDIG----NNLKTELRCLGFEPVL--FKKRGD------REKGVDIALT 81 Query: 104 VDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 + + + + + + D + LV ++R + V S L+ + D Sbjct: 82 REMLINAFNQNFDIGFLITSDEDYVVLVKDVKRYGQIVGGGFFKNGL----SKHLKVEFD 137 Query: 162 YFMDL 166 +F++L Sbjct: 138 HFIEL 142 >gi|167999628|ref|XP_001752519.1| predicted protein [Physcomitrella patens subsp. patens] gi|162696419|gb|EDQ82758.1| predicted protein [Physcomitrella patens subsp. patens] Length = 465 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 26/163 (15%), Positives = 47/163 (28%), Gaps = 26/163 (15%) Query: 8 IALFIDGAN--LYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 +A+ D N + A + R L+ V Y Sbjct: 18 VAILWDIENCPVPGEVNAEDVAGNIRIALREHPHVGAVTMFSAYGDFN-------HFPRK 70 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGD 122 + + G ++ K + D + VD F + + + +GD Sbjct: 71 VREGCQRTGVNLIDVP----------NGKKDAADKAILVDMFLFALDNPPPSTIFLITGD 120 Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165 F + L ++ +V V+ D S LR A F+ Sbjct: 121 VDFAPALHKL---GQRGYVVVLVIPDGVGVSSALR-GAGRFVY 159 >gi|297741265|emb|CBI32396.3| unnamed protein product [Vitis vinifera] Length = 437 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 25/142 (17%), Positives = 47/142 (33%), Gaps = 17/142 (11%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 P +A+ D N S D+ + A R ++ A + GD + Sbjct: 43 PHGSVAILWDIENCPVPSDVRPEDV-AGNIRMALRVHPVIRGAVTMFSAYGDFN---AFP 98 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFS 120 L + G +++ K + D + VD F + +++ S Sbjct: 99 RRLREGCQRTGVKLIDVP----------NGRKDAADKAILVDMFLFALDNPPPSSIMLIS 148 Query: 121 GDGCFTTLVAALQRKVKKVTIV 142 GD F + L ++ V +V Sbjct: 149 GDVDFAPALHILGQRGYTVILV 170 >gi|225428830|ref|XP_002282292.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 1361 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 25/142 (17%), Positives = 47/142 (33%), Gaps = 17/142 (11%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 P +A+ D N S D+ + A R ++ A + GD + Sbjct: 111 PHGSVAILWDIENCPVPSDVRPEDV-AGNIRMALRVHPVIRGAVTMFSAYGDFN---AFP 166 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFS 120 L + G +++ K + D + VD F + +++ S Sbjct: 167 RRLREGCQRTGVKLIDVP----------NGRKDAADKAILVDMFLFALDNPPPSSIMLIS 216 Query: 121 GDGCFTTLVAALQRKVKKVTIV 142 GD F + L ++ V +V Sbjct: 217 GDVDFAPALHILGQRGYTVILV 238 >gi|170093986|ref|XP_001878214.1| predicted protein [Laccaria bicolor S238N-H82] gi|164646668|gb|EDR10913.1| predicted protein [Laccaria bicolor S238N-H82] Length = 620 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 27/148 (18%), Positives = 50/148 (33%), Gaps = 10/148 (6%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +A+F D +S G+DI + + T FS L L Sbjct: 7 VAIFWDFEGTRTASNISGYDI---------AKNIRLTGQIFGTVKSFRSYYDFSALTSLR 57 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTT 127 + + Q + G+ M V+L + A + +I + D F Sbjct: 58 NPNLRHELQSSGISLIDCPSAGGKNIATKMMMVDLIIHALDH-PAPTTFLIITADRDFGY 116 Query: 128 LVAALQRKVKKVTIVSTVLSDPSMASDQ 155 +A L+ + +V ++S + P + S Sbjct: 117 AIATLRLRKYRVVLLSPPGTHPDVTSQA 144 >gi|147795296|emb|CAN64994.1| hypothetical protein VITISV_001778 [Vitis vinifera] Length = 531 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 25/142 (17%), Positives = 47/142 (33%), Gaps = 17/142 (11%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 P +A+ D N S D+ + A R ++ A + GD + Sbjct: 43 PHGSVAILWDIENCPVPSDVRPEDV-AGNIRMALRVHPVIRGAVTMFSAYGDFN---AFP 98 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFS 120 L + G +++ K + D + VD F + +++ S Sbjct: 99 RRLREGCQRTGVKLIDVP----------NGRKDAADKAILVDMFLFALDNPPPSSIMLIS 148 Query: 121 GDGCFTTLVAALQRKVKKVTIV 142 GD F + L ++ V +V Sbjct: 149 GDVDFAPALHILGQRGYTVILV 170 >gi|160896436|ref|YP_001562018.1| hypothetical protein Daci_0987 [Delftia acidovorans SPH-1] gi|160362020|gb|ABX33633.1| conserved hypothetical protein [Delftia acidovorans SPH-1] Length = 234 Score = 46.9 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 26/161 (16%), Positives = 43/161 (26%), Gaps = 33/161 (20%) Query: 7 KIALFIDGANLYASSKA--LGFDIDYRKLLKAFR-----SRAIVIRAYYYTTVVGDPEQQ 59 + ++IDG NLY S +D L + A V+ Y+T V + Sbjct: 8 RTTIYIDGYNLYYSRLKGTPYKWLDIAALFRDRILLPQDPGAEVVAIKYFTAPVKASYAR 67 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCG------------------------RKRVK 95 + Q + + Sbjct: 68 HGEASVQAQTQYLRALQARDPGLIQIVNGFHVFEPTSLPSYQAGANPSKNNVSRVWMIEE 127 Query: 96 SSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQR 134 DV LA+ A+ + + LVI S D + L+ Sbjct: 128 KQTDVNLALHAYRDAVRGECDQLVICSNDSDVEPALRMLRE 168 >gi|224123372|ref|XP_002330299.1| predicted protein [Populus trichocarpa] gi|222871334|gb|EEF08465.1| predicted protein [Populus trichocarpa] Length = 531 Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 26/138 (18%), Positives = 47/138 (34%), Gaps = 17/138 (12%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +A+ D N S D+ + A R ++ A + GD S L Sbjct: 47 VAILWDIENCRVPSDVRPEDV-AGNIRMALRVHPVIKGAVMMFSAYGDFN---SFSRRLR 102 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGC 124 + G ++V K + D + VD F + +++ SGD Sbjct: 103 EGCQRTGVKLVDVP----------NGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVD 152 Query: 125 FTTLVAALQRKVKKVTIV 142 F+ + L ++ V +V Sbjct: 153 FSPALHILGQRGYTVILV 170 >gi|330880020|gb|EGH14169.1| hypothetical protein PSYMP_26883 [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 229 Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 25/165 (15%), Positives = 50/165 (30%), Gaps = 37/165 (22%) Query: 7 KIALFIDGANLYASSKA--LGFDIDYRKLLKAFRS----RAIVIRAYYYTTVVGDPEQQF 60 + A F+DG NL+ A +D LL + ++TT V Sbjct: 2 RTACFVDGYNLFYGLLAGTPYKWLDLPSLLAHIIRVEYPDNTLDAVSFFTTGVMPTLATR 61 Query: 61 -----SPLHPLLDWLHYNGFQVVAKVAKE----------------FTENCGRKR-VKSSM 98 + L G +V+ + + G + + Sbjct: 62 GTLSKEAQDTYVRALKVRGVEVLYGRHQLEPRNAPRFVDKDTPASRADQVGIWKLEEKET 121 Query: 99 DVELAVDAFEQSE---------GLEHLVIFSGDGCFTTLVAALQR 134 DV +A+ + + ++ +V+ S D T + A++ Sbjct: 122 DVHIAISMYRLASRQMALPPEARIQQIVLVSADTDMTPSLRAIRE 166 >gi|301117798|ref|XP_002906627.1| conserved hypothetical protein [Phytophthora infestans T30-4] gi|262107976|gb|EEY66028.1| conserved hypothetical protein [Phytophthora infestans T30-4] Length = 173 Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 39/118 (33%), Gaps = 12/118 (10%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ------F 60 + AL IDG+ ++ALG IDY KL A +A + Q+ Sbjct: 18 RAALIIDGSYAMIGARALGGKIDYIKLRSALEDQASTQFGDCWFFDQNPSAQRVNPALTA 77 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRK------RVKSSMDVELAVDAFEQSEG 112 FQV K++ +C R V+ +D +A + Sbjct: 78 EYHMLKFAPPDGPQFQVSLFPMKKYNCHCRRCGNHFTQNVQKGVDNGIATKILSLAYE 135 >gi|162148603|ref|YP_001603064.1| hypothetical protein GDI_2830 [Gluconacetobacter diazotrophicus PAl 5] gi|161787180|emb|CAP56773.1| hypothetical protein GDI2830 [Gluconacetobacter diazotrophicus PAl 5] Length = 199 Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 29/192 (15%), Positives = 61/192 (31%), Gaps = 38/192 (19%) Query: 5 REKIALFIDGANLYASSKAL---------GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGD 55 +++ + D +N++ S ++ GF I + L+ + + + +V Sbjct: 2 NDRVHIIWDNSNIFHSGRSTGDILERRTDGFRIYFENLIDLAADGRPIEQVFCVGSVPPP 61 Query: 56 PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGL-- 113 + + L E GR + ++D L V Sbjct: 62 TNSVWGHIERLTGKKPE---------LFERGAASGR---EQAVDQALQVRMLRLGFDYRP 109 Query: 114 -EHLVIFSGDGC-------FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY--- 162 E +V+ +GDG F L KV +++ + ++R A+ Sbjct: 110 PETIVLLTGDGSGYEDGTGFFADAERLHNFGWKVEVLA----WQNHCKREMRNWAETNGV 165 Query: 163 FMDLAYLKNEIA 174 F+ L + I Sbjct: 166 FVPLDDFYSSIT 177 >gi|225389921|ref|ZP_03759645.1| hypothetical protein CLOSTASPAR_03671 [Clostridium asparagiforme DSM 15981] gi|225044022|gb|EEG54268.1| hypothetical protein CLOSTASPAR_03671 [Clostridium asparagiforme DSM 15981] Length = 84 Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 39/106 (36%), Gaps = 22/106 (20%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M + A+ ID N+ S K + + +L + I Y + ++ + Sbjct: 1 MEQNDRRFAVLIDADNV--SPKYIKY------ILDEVSDQGIATYKRIYGDWTDNEKRSW 52 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA 106 + LLDW ++++ G K++ D + +DA Sbjct: 53 KNV--LLDWS--------VNPIQQYSYTTG----KNATDSAMIIDA 84 >gi|294666413|ref|ZP_06731658.1| GCN5-related N-acetyltransferase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292603817|gb|EFF47223.1| GCN5-related N-acetyltransferase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 276 Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 39/217 (17%), Positives = 65/217 (29%), Gaps = 42/217 (19%) Query: 8 IALFIDGANLYAS-SKALGFD-IDYRKLLKAFRSRAI----VIRAYYYTT---------- 51 A++IDG NLY + F +D L ++ Y+T Sbjct: 49 TAVYIDGYNLYYGRIRGTAFKWLDVVTLFDRLLHDQDPTTDLLHVRYFTASALGRFATHK 108 Query: 52 -------------VVGDPEQQFSPLHPLLDWLHY---NGFQVVAKVAKEFTENCGRKRVK 95 + Q+F+ W V + K + Sbjct: 109 QASEIAQTTYLRALAHTHPQRFTTTLGKHSWDKGGTLLAEFVSGQPYDRTRRVRVWKLEE 168 Query: 96 SSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKK-VTIVSTVLSDP--- 149 DV LA+ + + E LV+ S D +AA++ V + T P Sbjct: 169 KQTDVNLALAMYRDAASGRYEQLVVCSNDSDIAPALAAIREDFPTIVLGMVTPRRPPVDG 228 Query: 150 ---SMASDQLRRQADYF-MDLAYLKNEIARDPDEDKK 182 S L R AD+ + + A+ P+ +K Sbjct: 229 EADRRVSVSLSRCADWIRHYILDDELATAQLPERVRK 265 >gi|289668076|ref|ZP_06489151.1| hypothetical protein XcampmN_06148 [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 250 Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 38/217 (17%), Positives = 67/217 (30%), Gaps = 42/217 (19%) Query: 8 IALFIDGANLYAS-SKALGFD-IDYRKLLKAFRSRA----IVIRAYYYT----------- 50 A++IDG NLY + F +D L ++ Y+T Sbjct: 7 TAVYIDGYNLYYGRIRGTAFKWLDVVALFDRLLHDQDPSTELLHVRYFTAPALGRFATNK 66 Query: 51 ------------TVVGDPEQQFSPLHPLLDWLHYNGFQ---VVAKVAKEFTENCGRKRVK 95 + Q+F+ W F V + K + Sbjct: 67 QASEIAQTTYLRALAHTHPQRFTTTLGKHSWDKGGAFLAEFVSGQPYDRTRRVRVWKLEE 126 Query: 96 SSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKK-VTIVSTVLSDP--- 149 DV LA+ + + + LV+ S D ++ A++ V V T+ P Sbjct: 127 KQTDVNLALAMYRDAASAQYQQLVVCSNDSDIEPVLTAIREDFPTIVLGVVTLRRQPVEG 186 Query: 150 ---SMASDQLRRQADYF-MDLAYLKNEIARDPDEDKK 182 S L +AD+ + + A+ P+ +K Sbjct: 187 ESDRRVSASLSSRADWTRHYILDSELAAAQLPERVRK 223 >gi|326436665|gb|EGD82235.1| hypothetical protein PTSG_02906 [Salpingoeca sp. ATCC 50818] Length = 210 Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 62/189 (32%), Gaps = 30/189 (15%) Query: 1 MFDPR-EKIALFIDGANLYASSKALGFDID-----YRKLLKAFRSRAIVIRAYYYTTVV- 53 M +P+ EK L +DG +A + + +L + R + A + Sbjct: 1 MEEPKGEKALLLVDGTCYFAPLERDRLSVRAAPKWLERLSEKIADRWSLSIARIHLFDAV 60 Query: 54 --------GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVK---------- 95 + LL + V + K F NC + Sbjct: 61 MDSSLHDFPSHRKADKSRKSLLRNMQQAHIAVHFRYLKPFRTNCEDVNCRYKSAAIEVPV 120 Query: 96 -SSMDVELAVDAF-EQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMAS 153 + +DV + A + ++ +V+F D + L+ AL+ K +V +V+ + Sbjct: 121 GAGVDVAITTFALADMPTDVKTVVLFVTDPDYAPLIRALKGKGTRVLVVTDSDAALD--- 177 Query: 154 DQLRRQADY 162 LR D Sbjct: 178 PALRDALDE 186 >gi|313159517|gb|EFR58880.1| conserved hypothetical protein [Alistipes sp. HGB5] Length = 186 Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 24/203 (11%), Positives = 61/203 (30%), Gaps = 40/203 (19%) Query: 1 MFDPREKIALFIDGANLY------ASSKA--------------LGFDIDYRKLLKAFRSR 40 M + +E + ID +N++ ++ K + + + LL Sbjct: 1 MNEEKE-CIVIIDNSNVWIEGMKLSALKEGIKSSPIKEKEPCDYSWRLSFGNLLNKVSEG 59 Query: 41 AIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDV 100 V+ + + ++ GFQV + + + ++D Sbjct: 60 KKVVSTLLVGSRPPKNDSLWTSAK-------KQGFQVS-------VFDRNTQGKEKAVDA 105 Query: 101 ELAVD---AFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLR 157 ++ L++ SGD F L+ + I + + P + ++ Sbjct: 106 QIVAQGTKMICTHPNKGVLILLSGDSDFIPLLEICNELGWESEIWAFKSALP--CAKKMI 163 Query: 158 RQADYFMDLAYLKNEIARDPDED 180 + L + ++I + Sbjct: 164 QYVTRVNYLDSIFSDIGYRQKKK 186 >gi|255555429|ref|XP_002518751.1| conserved hypothetical protein [Ricinus communis] gi|223542132|gb|EEF43676.1| conserved hypothetical protein [Ricinus communis] Length = 531 Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 46/138 (33%), Gaps = 17/138 (12%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +A+ D N S D+ + A R ++ A + GD S L Sbjct: 48 VAILWDIENCPVPSDVRPEDVG-GNIRMALRVHPVIKGAVMMFSAYGDFN---SFPRRLR 103 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGC 124 + G +++ K + D + VD F + +++ SGD Sbjct: 104 EGCQRTGVKLIDVP----------NGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVD 153 Query: 125 FTTLVAALQRKVKKVTIV 142 F + L ++ V +V Sbjct: 154 FAPALHILGQRGYTVILV 171 >gi|54027459|ref|YP_121701.1| hypothetical protein nfa54850 [Nocardia farcinica IFM 10152] gi|54018967|dbj|BAD60337.1| hypothetical protein [Nocardia farcinica IFM 10152] Length = 243 Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 23/116 (19%), Positives = 44/116 (37%), Gaps = 15/116 (12%) Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 P ++ L G+ V AK + D+ ++ + GL +++ S DG Sbjct: 106 RPWVEALRNVGYAVFAKPKI-------DEDSDVDADMLAHIELRSRGAGLAGIMVASADG 158 Query: 124 C-FTTLVAALQRKVKKVTIVST-VLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 F + L + V ++ + ++ SD L F+DL + R+P Sbjct: 159 QAFREPLERLAARGVPVQVLGFREHASWAVTSDTL-----EFIDLEDIPGVF-REP 208 >gi|242085250|ref|XP_002443050.1| hypothetical protein SORBIDRAFT_08g006900 [Sorghum bicolor] gi|241943743|gb|EES16888.1| hypothetical protein SORBIDRAFT_08g006900 [Sorghum bicolor] Length = 457 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 52/162 (32%), Gaps = 23/162 (14%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIR-AYYYTTVVGDPEQQFSPLHPL 66 +A+F D N S D ++ V+R A + GD + L Sbjct: 52 VAIFWDIENCPVPSDV--RPEDVAGNIRMALRMHPVVRGAVTMLSAYGDFN---AFPRRL 106 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDG 123 + G ++V K + D + VD F + +++ SGD Sbjct: 107 REGCQRTGVKLVDVP----------NGRKDAADKAILVDMFLFALDNRPPSSIMLISGDV 156 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165 F + L ++ ++S S S L A F+ Sbjct: 157 DFAPALHILGQRG-YTIVISIPSSV--TVSSAL-SSAGSFVW 194 >gi|118616825|ref|YP_905157.1| hypothetical protein MUL_1097 [Mycobacterium ulcerans Agy99] gi|118568935|gb|ABL03686.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length = 245 Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 30/120 (25%), Positives = 42/120 (35%), Gaps = 24/120 (20%) Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG-----LEHLVI 118 P +D L GF V AK K D ++ D E + L LV+ Sbjct: 114 RPWVDALRNVGFAVFAKP-------------KIDEDSDVDRDMLEHIDQRYREGLAALVV 160 Query: 119 FSGDGC-FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 S DG F + + R V ++ AS L A F+DL + R+P Sbjct: 161 ASADGQAFRQPLEKISRAGTPVQVLGF----REHASWALASDALEFVDLEDIAGVF-REP 215 >gi|226528190|ref|NP_001143204.1| hypothetical protein LOC100275707 [Zea mays] gi|223944455|gb|ACN26311.1| unknown [Zea mays] Length = 531 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 28/162 (17%), Positives = 51/162 (31%), Gaps = 23/162 (14%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIR-AYYYTTVVGDPEQQFSPLHPL 66 +A+F D N D ++ V+R A + GD + L Sbjct: 52 VAIFWDIENCPVPCDV--RPEDVAGNVRMALRMHPVVRGAVTMLSAYGDFN---AFPRRL 106 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDG 123 + G ++V K + D + VD F + +++ SGD Sbjct: 107 REGCQRTGVKLVDVP----------NGRKDAADKAILVDMFLFALDNHPPSSIMLISGDV 156 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165 F + L ++ +++ S S L A F+ Sbjct: 157 DFAPALHILGQRG-YTIVIAIPSSV--TVSSAL-SSAGSFVW 194 >gi|195615754|gb|ACG29707.1| hypothetical protein [Zea mays] Length = 531 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 28/162 (17%), Positives = 51/162 (31%), Gaps = 23/162 (14%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIR-AYYYTTVVGDPEQQFSPLHPL 66 +A+F D N D ++ V+R A + GD + L Sbjct: 52 VAIFWDIENCPVPCDV--RPEDVAGNVRMALRMHPVVRGAVTMLSAYGDFN---AFPRRL 106 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDG 123 + G ++V K + D + VD F + +++ SGD Sbjct: 107 REGCQRTGVKLVDVP----------NGRKDAADKAILVDMFLFALDNHPPSSIMLISGDV 156 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165 F + L ++ +++ S S L A F+ Sbjct: 157 DFAPALHILGQRG-YTIVIAIPSSV--TVSSAL-SSAGSFVW 194 >gi|168032729|ref|XP_001768870.1| predicted protein [Physcomitrella patens subsp. patens] gi|162679782|gb|EDQ66224.1| predicted protein [Physcomitrella patens subsp. patens] Length = 431 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 22/156 (14%), Positives = 43/156 (27%), Gaps = 24/156 (15%) Query: 8 IALFIDGAN--LYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 +A+ D N + A + R L+ V Y Sbjct: 9 VAILWDIENCPVPGEVNAEDVAGNIRIALRDQPHIGAVTMFSAYGDFN-------HFPKK 61 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDG 123 + + G ++ K + D + VD F + +V+ +GD Sbjct: 62 VREGCQRTGVNLIDVP----------NGKKDAADKAILVDMFLFALDNPCSTIVLVTGDV 111 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQ 159 F + L ++ V ++ S L+ Sbjct: 112 DFAPALHKLGQRG-YVVVLVIPDGVG--VSPALKGA 144 >gi|224436330|ref|ZP_03657356.1| hypothetical protein HcinC1_00245 [Helicobacter cinaedi CCUG 18818] Length = 175 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 11/90 (12%), Positives = 30/90 (33%), Gaps = 2/90 (2%) Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA--FEQSEGLEHLVIF 119 L + Y ++ + FT+ V+ +D+ + +D ++ +++F Sbjct: 60 KLLHDISVSPYIALRLGELKMQGFTDRGKPNIVQKQVDMLMGLDISHVSYKRLVDKIIVF 119 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDP 149 D + + +V +V Sbjct: 120 CKDTDIVPALKCARTNGIEVIVVDIAEGYK 149 >gi|262204298|ref|YP_003275506.1| hypothetical protein Gbro_4480 [Gordonia bronchialis DSM 43247] gi|262087645|gb|ACY23613.1| hypothetical protein Gbro_4480 [Gordonia bronchialis DSM 43247] Length = 230 Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 26/122 (21%), Positives = 48/122 (39%), Gaps = 27/122 (22%) Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE------GLEHLV 117 P +D L G+ V AK K + D ++ D + + GL +V Sbjct: 101 RPWVDALRNVGYAVFAKP-------------KLADDSDVDADMLDHIQLRRQTVGLAGVV 147 Query: 118 IFSGDGC-FTTLVAALQRKVKKVTIVST-VLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175 + S DG F ++ + + VT++ + ++ +D L F+DL + R Sbjct: 148 VASADGQAFREPLSQVAAEGVGVTVIGFREHASWALTADDL-----EFIDLEDIPGVF-R 201 Query: 176 DP 177 +P Sbjct: 202 EP 203 >gi|167997905|ref|XP_001751659.1| predicted protein [Physcomitrella patens subsp. patens] gi|162697640|gb|EDQ83976.1| predicted protein [Physcomitrella patens subsp. patens] Length = 449 Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 21/139 (15%), Positives = 40/139 (28%), Gaps = 21/139 (15%) Query: 8 IALFIDGAN--LYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 +A+ D N + A + R L+ V Y Sbjct: 9 VAILWDIENCPVPGEVNAEDVARNIRIALRDQPHIGAVTMFSAYGDFN-------HFPKK 61 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDG 123 + + G ++ K + D + VD F + +V+ +GD Sbjct: 62 VREGCQRTGVNLIDVP----------NGKKDAADKAILVDMFLFALDNPCSTIVLVTGDV 111 Query: 124 CFTTLVAALQRKVKKVTIV 142 F + L ++ V +V Sbjct: 112 DFAPALHKLGQRGYVVILV 130 >gi|237784873|ref|YP_002905578.1| hypothetical protein ckrop_0248 [Corynebacterium kroppenstedtii DSM 44385] gi|237757785|gb|ACR17035.1| hypothetical protein ckrop_0248 [Corynebacterium kroppenstedtii DSM 44385] Length = 228 Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats. Identities = 31/188 (16%), Positives = 56/188 (29%), Gaps = 39/188 (20%) Query: 9 ALFI-DGANLYASSKAL-------GFDIDYRKLLKAFRSRAIVIRAYYY-------TTVV 53 AL I D N+ ++ + + L + + A + A T Sbjct: 24 ALLIWDAPNIDMGLGSILGGRPSSAYRPRFDSLGQWLINEADQLSASRDEQIEPEATVFT 83 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS-EG 112 + P +D L GF V AK K D ++ D Sbjct: 84 NIMPGSADSIRPWIDALRNLGFAVFAKP-------------KLFDDTDVDPDMLAHINRR 130 Query: 113 LEH-----LVIFSGDG-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 + + + S DG F + L + V ++ A+ + +A F+DL Sbjct: 131 YDEGVLRSVYVASADGRNFQPRLEELAAEGIDVAVLGF----YEHATWAVMSEAIRFVDL 186 Query: 167 AYLKNEIA 174 + + Sbjct: 187 EDIPDIFT 194 >gi|260578532|ref|ZP_05846443.1| conserved hypothetical protein [Corynebacterium jeikeium ATCC 43734] gi|258603316|gb|EEW16582.1| conserved hypothetical protein [Corynebacterium jeikeium ATCC 43734] Length = 130 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 33/95 (34%), Gaps = 12/95 (12%) Query: 85 FTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIV 142 E+ ++ +D+ + +D +E + +++ SGD F +R I Sbjct: 21 RLEDFYLDIIQKGVDMRIGLDIATMAERGIVTQIIMISGDSDFVPAAKHARRAGIDFII- 79 Query: 143 STVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 + SD L D ++ + R P Sbjct: 80 ---DPLWARISDSLNEHVD------GVRECVRRPP 105 >gi|190572401|ref|YP_001970246.1| hypothetical protein Smlt0329 [Stenotrophomonas maltophilia K279a] gi|190010323|emb|CAQ43931.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a] Length = 253 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 9/78 (11%), Positives = 24/78 (30%), Gaps = 6/78 (7%) Query: 86 TENCGRKRVKSSMDVELAVDA--FEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS 143 ++ + +D+ + +D + +++ +GD F +R+ + Sbjct: 135 PDDLYPNVRQKGVDMRIGIDISSLALKRQVRQIILMAGDADFVPAAKLARREGVDFVL-- 192 Query: 144 TVLSDPSMASDQLRRQAD 161 S L D Sbjct: 193 --DPMWSKTPKGLIEHVD 208 >gi|227549577|ref|ZP_03979626.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM 44291] gi|227078341|gb|EEI16304.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM 44291] Length = 177 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 14/118 (11%), Positives = 37/118 (31%), Gaps = 23/118 (19%) Query: 74 GFQVVAKVAKEFT-----------ENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFS 120 G+ + K+ + + + +D+ + +D +E + +V+ S Sbjct: 48 GYTLRDGPLKKLCRGAISVEDLQEHDFVLEISQKGVDMRIGLDIASLAERGLVNQIVMIS 107 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 GD F +R + + +D L + ++ ++ P Sbjct: 108 GDSDFVPAAKHARRSGIDFIL----DPMWAPITDSLAEH------IDGIRQCVSPPPR 155 >gi|325918809|ref|ZP_08180894.1| hypothetical protein XVE_4927 [Xanthomonas vesicatoria ATCC 35937] gi|325534983|gb|EGD06894.1| hypothetical protein XVE_4927 [Xanthomonas vesicatoria ATCC 35937] Length = 247 Score = 45.0 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 36/216 (16%), Positives = 63/216 (29%), Gaps = 41/216 (18%) Query: 8 IALFIDGANLYAS-SKALGFD-IDYRKLLKAFRSRAI-----VIRAYYYTTVVGDPEQQF 60 A++IDG NLY + F +D L + Y+ +G Sbjct: 21 TAVYIDGYNLYYGRIRGTAFKWLDVVALFDRLLHDQDPTTDLLHVRYFTAPALGRFATHK 80 Query: 61 SPLHPLLDWLHYNGFQV----VAKVAKEFTENCG--------------------RKRVKS 96 +L + K + G K + Sbjct: 81 QASETQAAYLRALAHTHPQRFTTTLGKHSWDKGGTLLPEFVSGQPYDRARRVRVWKLEEK 140 Query: 97 SMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVT-IVSTVLSDP---- 149 DV LA+ + + + LV+ S D + A++ V V T + P Sbjct: 141 QTDVNLALTMYRDAASARYQQLVVCSNDSDIEPALVAIREDFPSVVLGVVTPRNPPVDGE 200 Query: 150 --SMASDQLRRQADYF-MDLAYLKNEIARDPDEDKK 182 S L +AD+ + + A+ P+ +K Sbjct: 201 SDRRVSVSLSSRADWTRHYILDGELAAAQLPERVRK 236 >gi|313142851|ref|ZP_07805044.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] gi|313127882|gb|EFR45499.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] Length = 212 Score = 45.0 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 11/90 (12%), Positives = 30/90 (33%), Gaps = 2/90 (2%) Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA--FEQSEGLEHLVIF 119 L + Y ++ + FT+ V+ +D+ + +D ++ +++F Sbjct: 97 KLLHDISVSPYIALRLGELKMQGFTDRGKPNIVQKQVDMLMGLDISHVSYKRLVDKIIVF 156 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDP 149 D + + +V +V Sbjct: 157 CKDTDIVPALKCARTNGIEVIVVDIAEGYK 186 >gi|25026904|ref|NP_736958.1| hypothetical protein CE0348 [Corynebacterium efficiens YS-314] gi|23492184|dbj|BAC17158.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] Length = 281 Score = 45.0 bits (105), Expect = 0.005, Method: Composition-based stats. Identities = 12/90 (13%), Positives = 33/90 (36%), Gaps = 12/90 (13%) Query: 94 VKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151 + +D+ + +D +E + +V+ +GD F +R+ + + Sbjct: 178 TQKGVDMRIGLDIASLAERQTVNQIVMITGDSDFVPAAKHARREGIDFIL----DPMWAP 233 Query: 152 ASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 + L D ++ + + P+ +K Sbjct: 234 IAKSLSEHVD------GIRQCVFKKPENEK 257 >gi|239916658|ref|YP_002956216.1| Protein of unknown function DUF88 [Micrococcus luteus NCTC 2665] gi|281414886|ref|ZP_06246628.1| hypothetical protein MlutN2_06748 [Micrococcus luteus NCTC 2665] gi|289706971|ref|ZP_06503306.1| conserved hypothetical protein [Micrococcus luteus SK58] gi|239837865|gb|ACS29662.1| Protein of unknown function DUF88 [Micrococcus luteus NCTC 2665] gi|289556296|gb|EFD49652.1| conserved hypothetical protein [Micrococcus luteus SK58] Length = 182 Score = 44.6 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 46/161 (28%), Gaps = 14/161 (8%) Query: 10 LFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDW 69 L IDG N+ A+ +L+ R + D Q L Sbjct: 8 LLIDGENIDATLG--------TSILQRRPQPDERPRWKRLLGYLEDRWDQPVKGLFFLAI 59 Query: 70 LHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTT-L 128 V + + + +D+ + A + +V+ S D F L Sbjct: 60 DGEIPIPFVQALTALGFQPIMLRGEGKVVDIGIQRTAEALLGREDDVVLVSHDADFAPQL 119 Query: 129 VAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD-YFMDLAY 168 ++ I+ S +LRR F DL + Sbjct: 120 TDLAATPGRRTGIMGF----EEFLSHELRRIPGVEFFDLEH 156 >gi|331682212|ref|ZP_08382834.1| conserved hypothetical protein [Escherichia coli H299] gi|331080636|gb|EGI51812.1| conserved hypothetical protein [Escherichia coli H299] Length = 285 Score = 44.6 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 12/95 (12%), Positives = 35/95 (36%), Gaps = 3/95 (3%) Query: 86 TENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVS 143 ++ + +D++L +D + ++ +V+ +GD F + K + Sbjct: 151 NDDFYYDIKQKQVDIKLGMDITTLAYEKLVDVIVLVAGDSDFVPAAKHARIKGIDFILDP 210 Query: 144 TVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178 + S+ + ++ L + + +PD Sbjct: 211 LRQNVTPSLSEH-IDGVQSYSLISGLADALHVEPD 244 >gi|259506035|ref|ZP_05748937.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] gi|259166392|gb|EEW50946.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] Length = 247 Score = 44.6 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 12/90 (13%), Positives = 33/90 (36%), Gaps = 12/90 (13%) Query: 94 VKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151 + +D+ + +D +E + +V+ +GD F +R+ + + Sbjct: 144 TQKGVDMRIGLDIASLAERQTVNQIVMITGDSDFVPAAKHARREGIDFIL----DPMWAP 199 Query: 152 ASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 + L D ++ + + P+ +K Sbjct: 200 IAKSLSEHVD------GIRQCVFKKPENEK 223 >gi|328948943|ref|YP_004366280.1| hypothetical protein Tresu_2114 [Treponema succinifaciens DSM 2489] gi|328449267|gb|AEB14983.1| Domain of unknown function DUF88 [Treponema succinifaciens DSM 2489] Length = 311 Score = 44.6 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 47/121 (38%), Gaps = 13/121 (10%) Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---------GLE 114 L GFQ + + GR V+ + F ++ + Sbjct: 76 QKFYRALDEAGFQRNTFNLRSQESSNGRLPTLKEDAVDTTI-VFNTAKEFYTKSRDERFD 134 Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDP---SMASDQLRRQADYFMDLAYLKN 171 LV+++GDG + LV+ L+ + +V ++ P + AS L AD + ++ L + Sbjct: 135 TLVLYAGDGDLSVLVSGLKAEGVRVFVIYYDFKTPVSITRASQNLLETADKAISISSLLD 194 Query: 172 E 172 E Sbjct: 195 E 195 >gi|313896562|ref|ZP_07830111.1| hypothetical protein HMPREF9162_1765 [Selenomonas sp. oral taxon 137 str. F0430] gi|312974747|gb|EFR40213.1| hypothetical protein HMPREF9162_1765 [Selenomonas sp. oral taxon 137 str. F0430] Length = 305 Score = 44.6 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 24/181 (13%), Positives = 47/181 (25%), Gaps = 29/181 (16%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 + +A+ D N + +A Y + Sbjct: 6 SNDTVAILYDIENAPIEMLQY-----------------TIDKAQRYQPCRMIVVSDWEAH 48 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG-LEHLVIFSGD 122 W + F + K+S+D L A + + I + D Sbjct: 49 PEQKRWDRLMQY-----PDFTFRQISRTFFGKNSLDSALYDSAQILYQEGVRKYFIITTD 103 Query: 123 GCFTTLVAALQRKV-KKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 F + +L + + V T AS+ LR + F + R ++ Sbjct: 104 SDFVRIAESLNAQDPSYIIGVGTKQ-----ASEDLRNAYNEFFVYPPERKTKGRTAKKNT 158 Query: 182 K 182 + Sbjct: 159 E 159 >gi|125572356|gb|EAZ13871.1| hypothetical protein OsJ_03795 [Oryza sativa Japonica Group] Length = 454 Score = 44.6 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 20/192 (10%), Positives = 55/192 (28%), Gaps = 24/192 (12%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M + +++A +ID +L + + + + + ++ + + V + Sbjct: 233 MPEEGKRLAFYIDIEHLQSVVGIVEHK-RFWEDWDKWGAQGQLGVRIIEDSRVAPTKFSK 291 Query: 61 SPL-------------HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAF 107 S + + V+ + + + VD Sbjct: 292 SRDPLIVRKFGDVEPGNYWYNVCEGEAEHVLRPPQGAIRTAPSLMDIVDGIISRMQVD-- 349 Query: 108 EQSEGLEHLVIFSGDGCF-TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 + + + DG + L ++V + ++ + D L+ + L Sbjct: 350 -----FDSVHVGGNDGNLRRRIEERLNGGGRQVYVAGEGINVVLL--DALKAKYSSVHYL 402 Query: 167 AYLKNEIARDPD 178 + ARD Sbjct: 403 DAFEELWARDSK 414 >gi|304437583|ref|ZP_07397538.1| conserved hypothetical protein [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369396|gb|EFM23066.1| conserved hypothetical protein [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 227 Score = 44.6 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 13/127 (10%), Positives = 39/127 (30%), Gaps = 2/127 (1%) Query: 17 LYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQ 76 +Y D L + ++ + L + + + Sbjct: 65 VYHPLLQRQIDFSQSDLRTWMYAFIEQLKKKRKFAIRLGKLADEQAQFLLREDITRKLCR 124 Query: 77 VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQR 134 +V ++ + +D+++ +D + + ++ +V+ SGD F +R Sbjct: 125 SALQVTDLKEQDFLLDVSQKGVDMKIGLDIASLAYKQQVDQIVLISGDSDFVPAAKLARR 184 Query: 135 KVKKVTI 141 + + Sbjct: 185 EGIDFIL 191 >gi|120552973|ref|YP_957324.1| hypothetical protein Maqu_0029 [Marinobacter aquaeolei VT8] gi|120322822|gb|ABM17137.1| conserved hypothetical protein [Marinobacter aquaeolei VT8] Length = 271 Score = 44.6 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 6/50 (12%), Positives = 22/50 (44%), Gaps = 2/50 (4%) Query: 94 VKSSMDVELAVDA--FEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTI 141 + +D+ + +D + ++ +++ +GD F +R+ + + Sbjct: 189 HQKGVDMRIGIDIASLTLKQQVDTIILVAGDSDFVPAAKMARREGIEFIL 238 >gi|209916815|ref|YP_002291006.1| hypothetical protein ECSE_P4-0009 [Escherichia coli SE11] gi|209915445|dbj|BAG80515.1| conserved hypothetical protein [Escherichia coli SE11] Length = 224 Score = 44.2 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 20/160 (12%), Positives = 47/160 (29%), Gaps = 33/160 (20%) Query: 7 KIALFIDGANLYASS-KALGFD-IDYRKLLKA-------------------------FRS 39 + +++DG N Y K G+ +D KL + F + Sbjct: 2 RTIVYVDGFNFYHGLVKRSGYKWLDLYKLFEEQLLPIRARESQLIQVKFFTAEIKAKFAT 61 Query: 40 RAIVIR---AYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAK-VAKEFTENCGRKRVK 95 R + Y+ ++ ++ + + K + Sbjct: 62 RGELAHQAQQAYHRALLQIYGEKLQIIKGYYSERQECAMTFNEGYPPSKTDRTTVWKLEE 121 Query: 96 SSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQ 133 DV +A++ + + E LV+ + D + ++ Sbjct: 122 KQTDVRMALEMYRDAIRGEAEQLVLCTNDSDMIPPIEMIK 161 >gi|299469634|emb|CBN76488.1| conserved unknown protein [Ectocarpus siliculosus] Length = 353 Score = 44.2 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 38/118 (32%), Gaps = 17/118 (14%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 + ++++ +F+D N+ K G +LL +V + Sbjct: 16 ERKQRVGVFVDVENVLGWLKRGGC----TELLAKAGELGVVGIRRAFGDFSNATVASRQ- 70 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 D L +GF +V V K +S D+ + +D E + S Sbjct: 71 -----DELQRHGFDLVHTVH-------PAKGKSNSADISMTIDVMESCRTPGGVFDAS 116 >gi|21282108|ref|NP_645196.1| hypothetical protein MW0379 [Staphylococcus aureus subsp. aureus MW2] gi|300911084|ref|ZP_07128533.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus TCH70] gi|21203544|dbj|BAB94244.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus MW2] gi|300887263|gb|EFK82459.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus TCH70] Length = 229 Score = 44.2 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 25/218 (11%), Positives = 57/218 (26%), Gaps = 60/218 (27%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAI---------------VIRAYYY 49 EK+A+ +DG S + + ++ S + R +YY Sbjct: 1 MEKVAILVDGGYYRKISAKVYGKVTAKERADELYSYCNRHLKETHFKEEIYNKLYRIFYY 60 Query: 50 TTVVGDP----------------EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKR 93 D + + + + E++ C K Sbjct: 61 DCPPIDKIVYHPLLKKNVNFSNTDTKKWTEDFFKEMSKKRKVALRLGELSEYSVECNLKY 120 Query: 94 -------------------------VKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFT 126 + +D+++ +D S ++ +++ +GD F Sbjct: 121 SITKKLLNGSIDLNDLKEKDFSLSLQQKGVDMKIGLDIASLSFKHQVDKIILIAGDSDFV 180 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQL--RRQADY 162 + + + S + S + RR D Sbjct: 181 PAAKLARTEGIDFVLDSLGADIRNNLSLHIDGRRTCDE 218 >gi|326436666|gb|EGD82236.1| hypothetical protein PTSG_02907 [Salpingoeca sp. ATCC 50818] Length = 341 Score = 44.2 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 23/134 (17%), Positives = 49/134 (36%), Gaps = 12/134 (8%) Query: 45 RAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGR----KRVKSSMDV 100 R ++ ++ + + + + + + K + + V++ +DV Sbjct: 73 RRAFHKALLEQMQTEAGKDILIKTHIQHLKPMAIRCPEKTCVHSQPGKEVVRPVQAGVDV 132 Query: 101 ELAV-DAFEQSEGLEHLVIFSGDGCFTTLVAALQR--KVKKVTIVSTVLSDPSMASDQLR 157 ++A + H+ F GDG F ++ AL+R K V +V + S LR Sbjct: 133 DIAAFLLTSLPPDVTHVYCFIGDGDFVPVIEALRRPQFGKTVKLVLFSET---ALSIGLR 189 Query: 158 R--QADYFMDLAYL 169 + L+ L Sbjct: 190 SVMAKSDIIFLSKL 203 >gi|320529053|ref|ZP_08030145.1| conserved domain protein [Selenomonas artemidis F0399] gi|320138683|gb|EFW30573.1| conserved domain protein [Selenomonas artemidis F0399] Length = 305 Score = 44.2 bits (103), Expect = 0.008, Method: Composition-based stats. Identities = 24/181 (13%), Positives = 47/181 (25%), Gaps = 29/181 (16%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 + +A+ D N + +A Y + Sbjct: 6 SNDTVAILYDIENAPIEMLQY-----------------TIDKAQRYQPCRMIVVSDWEAH 48 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG-LEHLVIFSGD 122 W + F + K+S+D L A + + I + D Sbjct: 49 PEQKRWDRLMQY-----PDFTFRQISRTFFGKNSLDSALYDSAQILYQEGVRKYFIITTD 103 Query: 123 GCFTTLVAALQRKV-KKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181 F + +L + + V T AS+ LR + F + R ++ Sbjct: 104 SDFVRIAESLNAQDPSYIIGVGTKQ-----ASEDLRNAYNEFFVYPPERKIKGRTTKKNT 158 Query: 182 K 182 + Sbjct: 159 E 159 >gi|125528075|gb|EAY76189.1| hypothetical protein OsI_04122 [Oryza sativa Indica Group] Length = 454 Score = 44.2 bits (103), Expect = 0.008, Method: Composition-based stats. Identities = 21/192 (10%), Positives = 55/192 (28%), Gaps = 24/192 (12%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M + +++A +ID +L S + + + + ++ + + V + Sbjct: 233 MPEEGKRLAFYIDIEHLQ-SVFGIVEHKRFWEDWDKWGAQGQLGVRIIEDSRVAPTKFSK 291 Query: 61 SPL-------------HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAF 107 S + + V+ + + + VD Sbjct: 292 SRDPLIVRKFGDVEPGNYWYNVCEGEAEHVLRPPQGAIRTAPSLMDIVDGIISRMQVD-- 349 Query: 108 EQSEGLEHLVIFSGDGCF-TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 + + + DG + L ++V + ++ + D L+ + L Sbjct: 350 -----FDSVHVGGNDGNLRRRIEERLNGGGRQVYVAGEGINVVLL--DALKAKYSSVHYL 402 Query: 167 AYLKNEIARDPD 178 + ARD Sbjct: 403 DAFEELWARDSK 414 >gi|148927765|ref|ZP_01811198.1| hypothetical protein TM7_0453 [candidate division TM7 genomosp. GTL1] gi|147886893|gb|EDK72430.1| hypothetical protein TM7_0453 [candidate division TM7 genomosp. GTL1] Length = 199 Score = 43.9 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 25/188 (13%), Positives = 46/188 (24%), Gaps = 36/188 (19%) Query: 13 DGANLYA------------SSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 DG N + K + F D+ + YY T + ++ Sbjct: 4 DGENFRHQIAHILLEHEKITEKNIFFKFDFYGFCSEIIGEEHLKITYYTTKIKQPRQKIP 63 Query: 61 SPL-----------HPLLDWLHYNGFQVV-AKVAKEFTENCGRKRVK-------SSMDVE 101 L + WL +VV A + N K +DV Sbjct: 64 KALEKNIASISAANRRWVAWLTNQKIKVVKAGHLRVRESNACIHCGKRTLVLQEKGVDVR 123 Query: 102 LAVDAFEQSEGLEH-LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160 +A D + + +V+ S D + + + + A Sbjct: 124 VATDLVHFARQKKGPIVLGSSDSDIVPALEVAAGLGAPIIYLCYASQLNRSVA----AAA 179 Query: 161 DYFMDLAY 168 + Sbjct: 180 SKVITFDD 187 >gi|120406890|ref|YP_956719.1| hypothetical protein Mvan_5954 [Mycobacterium vanbaalenii PYR-1] gi|119959708|gb|ABM16713.1| hypothetical protein Mvan_5954 [Mycobacterium vanbaalenii PYR-1] Length = 222 Score = 43.9 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 28/76 (36%), Gaps = 8/76 (10%) Query: 99 DVELA--VDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVT-IVSTVLSDPSMASDQ 155 D L VD + +VI SGD F L LQ V ++ +S Sbjct: 83 DTALIDSVDVGWVAANFGQVVIASGDHIFAPLAHGLQSNGLHVIQVIG-----RGASSAT 137 Query: 156 LRRQADYFMDLAYLKN 171 L R + L ++++ Sbjct: 138 LYRACNEQKYLTHIRD 153 >gi|58583681|ref|YP_202697.1| hypothetical protein XOO4058 [Xanthomonas oryzae pv. oryzae KACC10331] gi|58428275|gb|AAW77312.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae KACC10331] Length = 84 Score = 43.9 bits (102), Expect = 0.010, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 33/92 (35%), Gaps = 13/92 (14%) Query: 93 RVKSSMDVELAVDA--FEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS 150 + +D+ + +D ++ +V+F+GD F +R+ + S Sbjct: 1 MRQKGVDMRIGIDISSLALKHQVDQIVLFAGDADFVPAAKLARREGIDFVL----DPMWS 56 Query: 151 MASDQLRRQADYFMDLAYLKNEIARD-PDEDK 181 +D L + +++ R P + K Sbjct: 57 SVADGLLEH------IDGMRSVCPRPIPRKPK 82 >gi|269796423|ref|YP_003315878.1| hypothetical protein Sked_31470 [Sanguibacter keddieii DSM 10542] gi|269098608|gb|ACZ23044.1| hypothetical protein Sked_31470 [Sanguibacter keddieii DSM 10542] Length = 192 Score = 43.9 bits (102), Expect = 0.010, Method: Composition-based stats. Identities = 25/186 (13%), Positives = 60/186 (32%), Gaps = 38/186 (20%) Query: 1 MFDPREKIA----LFIDGANLYASSK--------ALGFDIDYRKLLKAFRS-RAIVIRAY 47 M ++ A L +DG N+ A+ A + ++ + ++ + Sbjct: 1 MSGSEQRTARPTYLLVDGENIDATLGMNVLGHRPAPEERPRWDRISEFAQTLWGQPVTPL 60 Query: 48 YYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAF 107 ++ P + L G++ + + +D+ + Sbjct: 61 FFLNASSGQMP-----MPFVQALLAMGYRPIPL---------AGASHEKVVDIGIQR-TL 105 Query: 108 EQSEGLE-HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS----MASDQLRRQADY 162 E + ++ +++ S DG F V AL ++V ++ +++ L Sbjct: 106 EAIKDVDGDVLLASHDGDFLPQVEALLDGERRVGLMCFREFVNGRLNELSARGL-----E 160 Query: 163 FMDLAY 168 F DL Sbjct: 161 FFDLEE 166 >gi|213493840|gb|ACJ48051.1| 6-hydroxy-3-succinoylpyridine hydroxylase [Pseudomonas putida] Length = 204 Score = 43.9 bits (102), Expect = 0.010, Method: Composition-based stats. Identities = 23/138 (16%), Positives = 49/138 (35%), Gaps = 9/138 (6%) Query: 32 KLLKAFRSRAIVI--RAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV----AKVAKEF 85 K++++ + +A Y+T + + + + V K +E Sbjct: 53 KIIESVARAGDSVSSQALYHTALRKLHDGRIELIEGYYAVNKMKVKIVDPENPDKAPREC 112 Query: 86 TENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRK-VKKVTIV 142 E K + DV LA+ A+ S ++H VI + D + ++ ++ +V Sbjct: 113 REIQAWKVEEKQSDVNLALQAYHDSITGQVDHAVIVTNDTDIAPALQMIRAHTDVRIGVV 172 Query: 143 STVLSDPSMASDQLRRQA 160 A+ L + A Sbjct: 173 VPTSGQNRSANTDLIKFA 190 >gi|325001258|ref|ZP_08122370.1| hypothetical protein PseP1_20962 [Pseudonocardia sp. P1] Length = 203 Score = 43.9 bits (102), Expect = 0.010, Method: Composition-based stats. Identities = 36/185 (19%), Positives = 59/185 (31%), Gaps = 26/185 (14%) Query: 4 PREKIALFIDGANLYASSK---------ALGFDID-YRKLLKAFRSRAIVIRAYYYTTVV 53 P E++ L D N+ S A D + L A +T V Sbjct: 5 PLERVLLVWDAPNMDMSLGSLLGARPTSAYRPRFDAVGRWLLDLAGTEAEAEACVFTNVA 64 Query: 54 GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGL 113 + + P ++ L GF V AK + + +D L Sbjct: 65 PGSIE---IVRPWVEALRNVGFAVFAKPKTSDDSDVDDDMLA-------HIDLRSGEGRL 114 Query: 114 EHLVIFSGDG-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 H+V+ SGDG F + L VT++ + ++ F+DL + Sbjct: 115 RHVVVASGDGRAFKDPLEKLVEGGTDVTVIGFREYAGFAQASEVIS----FLDLEDMDGV 170 Query: 173 IARDP 177 R+P Sbjct: 171 F-REP 174 >gi|298693751|gb|ADI96973.1| hypothetical protein SAOV_0437 [Staphylococcus aureus subsp. aureus ED133] Length = 229 Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats. Identities = 24/218 (11%), Positives = 56/218 (25%), Gaps = 60/218 (27%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAI---------------VIRAYYY 49 EK+A+ +DG S + + ++ S + R +YY Sbjct: 1 MEKVAILVDGGYYRKISAKVYGKVTAKERADELYSYCNRQLKETHFKEEIYNKLYRIFYY 60 Query: 50 TTVVGDP----------------EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKR 93 D + + + + E++ K Sbjct: 61 DCPPIDKIVYHPLLKKNVNFSNTDTKKWTEDFFKEMSKKRKVALRLGELSEYSVEYNLKY 120 Query: 94 -------------------------VKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFT 126 + +D+++ +D S ++ +++ +GD F Sbjct: 121 SITKKLLNGSIDLNDLKEKDFSLSLQQKGVDMKIGLDIASLSFKHQVDKIILIAGDSDFV 180 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQL--RRQADY 162 + + + S + S + RR D Sbjct: 181 PAAKLARTEGIDFVLDSLGADIRNNLSLHIDGRRTCDE 218 >gi|254420143|ref|ZP_05033867.1| hypothetical protein BBAL3_2453 [Brevundimonas sp. BAL3] gi|196186320|gb|EDX81296.1| hypothetical protein BBAL3_2453 [Brevundimonas sp. BAL3] Length = 253 Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats. Identities = 17/143 (11%), Positives = 40/143 (27%), Gaps = 13/143 (9%) Query: 5 REKIALFIDGANLYASSKALGFD----IDYRKLLKAFRSRAI-VIRAYYYTTVVGDPEQQ 59 + + L++DG NL+ + +D R L + + + + + Sbjct: 20 KRRAVLYVDGYNLFHALLDQKRREWLWLDLRALGRGLIDPMERLTGVVWVSAHKPQARAR 79 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA--------FEQSE 111 L + + E+C S E D + Sbjct: 80 MEAQFRYETALRARRVRCLMGHFVVHGEHCRACGHGWSSATEKQSDVNLALAVADDVAAN 139 Query: 112 GLEHLVIFSGDGCFTTLVAALQR 134 ++ + + + DG V ++ Sbjct: 140 RVDSVYLLTTDGDHAATVRFVRE 162 >gi|49485284|ref|YP_042505.1| hypothetical protein SAS0381 [Staphylococcus aureus subsp. aureus MSSA476] gi|297209084|ref|ZP_06925483.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus ATCC 51811] gi|49243727|emb|CAG42152.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus MSSA476] gi|296886017|gb|EFH24951.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus ATCC 51811] Length = 229 Score = 43.5 bits (101), Expect = 0.012, Method: Composition-based stats. Identities = 24/218 (11%), Positives = 56/218 (25%), Gaps = 60/218 (27%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAI---------------VIRAYYY 49 EK+A+ +DG S + + ++ S + R +YY Sbjct: 1 MEKVAILVDGGYYRKISAKVYGKVTAKERADELYSYCNRHLKETHFKEEIYNKLYRIFYY 60 Query: 50 TTVVGDP----------------EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKR 93 D + + + + E++ K Sbjct: 61 DCPPIDKIVYHPLLKKNVNFSNTDTKKWTEDFFKEMSKKRKVALRLGELSEYSVEYNLKY 120 Query: 94 -------------------------VKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFT 126 + +D+++ +D S ++ +++ +GD F Sbjct: 121 SITKKLLNGSIDLNDLKEKDFSLSLQQKGVDMKIGLDIASLSFKHQVDKIILIAGDSDFV 180 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQL--RRQADY 162 + + + S + S + RR D Sbjct: 181 PAAKLARTEGIDFVLDSLGADIRNNLSLHIDGRRTCDE 218 >gi|242310286|ref|ZP_04809441.1| helicase [Helicobacter pullorum MIT 98-5489] gi|239522684|gb|EEQ62550.1| helicase [Helicobacter pullorum MIT 98-5489] Length = 242 Score = 43.5 bits (101), Expect = 0.012, Method: Composition-based stats. Identities = 13/111 (11%), Positives = 34/111 (30%), Gaps = 6/111 (5%) Query: 32 KLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTEN-CG 90 K +R Y V + S ++ + E + Sbjct: 100 KFRSELLKH---LRRQPYFAVRLGEIDENSFQWKFKNYDKFKKILRKEIDVSELSNEDFV 156 Query: 91 RKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKV 139 + +D+++ +D + +E +++ + D F V +++ V Sbjct: 157 LDIKQKGVDMKIGLDIATLANKHQVEKIILITADSDFVPAVKHARKEGLIV 207 >gi|222823150|ref|YP_002574723.1| hypothetical protein Cla_0106 [Campylobacter lari RM2100] gi|222538371|gb|ACM63472.1| conserved hypothetical protein [Campylobacter lari RM2100] Length = 240 Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats. Identities = 16/110 (14%), Positives = 40/110 (36%), Gaps = 16/110 (14%) Query: 46 AYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFT--------------ENCGR 91 + + T + D +Q L + N FQ K K+F ++ Sbjct: 98 TFKFRTSLLDCLRQQPYFAVRLGEIDENSFQWKIKDYKKFQQLLQKEIKIDSLTEDDFVL 157 Query: 92 KRVKSSMDVELAVDA--FEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKV 139 + +D+++ +D + +E +++ + D F + +++ V Sbjct: 158 DIRQKGVDMKIGLDIATLSIKKQIEKIILITADSDFIPAIKHARKEGVIV 207 >gi|152965451|ref|YP_001361235.1| hypothetical protein Krad_1483 [Kineococcus radiotolerans SRS30216] gi|151359968|gb|ABS02971.1| hypothetical protein Krad_1483 [Kineococcus radiotolerans SRS30216] Length = 259 Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 39/120 (32%), Gaps = 12/120 (10%) Query: 56 PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEH 115 L ++ L G+ V A+ ++ ++ + + S L Sbjct: 71 HPTSAVSLRGWIEALRSFGYAVFARPKVHPEDDVDDAMLQ-------HIASRRASHRLRR 123 Query: 116 LVIFSGDG-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174 +V+ SGDG F + L R +V ++S L F+DL + Sbjct: 124 VVVASGDGRNFLAPLEELHRAGVRVVVLSFAEVAGYAQESPLI----EFVDLEDVPGAFQ 179 >gi|295394693|ref|ZP_06804911.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] gi|294972463|gb|EFG48320.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC 49030] Length = 257 Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 35/105 (33%), Gaps = 5/105 (4%) Query: 40 RAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYN-GFQVVAKVAKEFTENCGRKRVKSSM 98 ++R + G+ + S D L ++ K E+ + + Sbjct: 105 HQQLVRKRKFAFRRGEELESQSHFSLKYDKLKKLCSGKISVSDLK--PEDFDLDITQKGV 162 Query: 99 DVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTI 141 D+ + +D +E + +V+ SGD F +R + Sbjct: 163 DMRIGLDIASLAERRLVNQIVMISGDSDFVPAAKHARRSGIDFIL 207 >gi|296138104|ref|YP_003645347.1| hypothetical protein Tpau_0365 [Tsukamurella paurometabola DSM 20162] gi|296026238|gb|ADG77008.1| conserved hypothetical protein [Tsukamurella paurometabola DSM 20162] Length = 221 Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats. Identities = 32/195 (16%), Positives = 62/195 (31%), Gaps = 45/195 (23%) Query: 7 KIALFIDGANLYASSKAL-----------------GFDIDYRKLLKAFRSRAIVIRAYYY 49 ++ L D NL ++ + ++Y L++ + A + Sbjct: 18 RVLLVWDAPNLDMGLGSILGGRPTAAHRPRFDALGRWLLEYTAALESDTDSRLEPEATVF 77 Query: 50 TTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ 109 T + + P ++ L G+ V AK K D ++ D + Sbjct: 78 TNIAPGTAD---VVRPWVEALRNVGYAVFAKP-------------KVDEDSDVDADMLDH 121 Query: 110 S------EGLEHLVIFSGDGC-FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162 GL L++ S DG F + + V ++ A+ L+ Sbjct: 122 IEVRRYRPGLGGLLVASADGQAFREPLEEIAATGVPVKVLGF----REHAAWALQSPTLE 177 Query: 163 FMDLAYLKNEIARDP 177 F+DL + R+P Sbjct: 178 FVDLEDIAGVF-REP 191 >gi|209693661|ref|YP_002261589.1| hypothetical protein VSAL_I0028 [Aliivibrio salmonicida LFI1238] gi|208007612|emb|CAQ77713.1| hypothetical protein VSAL_I0028 [Aliivibrio salmonicida LFI1238] Length = 317 Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 48/174 (27%), Gaps = 42/174 (24%) Query: 7 KIALFIDGANLYASSKA--LGFDIDYRKLLKA-FRSRAIVIRAYYY-------------- 49 + ++IDG N Y +D KL + R+ V A + Sbjct: 2 RTRIYIDGYNFYYGCLKGTPYKWLDLVKLFEEHIIPRSDVYNATLHDNVGIKYFTAEITN 61 Query: 50 --TTVVGDPEQQFSPLHPLLDWLHYNGFQV--------------------VAKVAKEFTE 87 Q S H L + + K K+ Sbjct: 62 KAAADPNSVNDQRSYHHALYLHSENLLKTIKGSYAVDKVEYPKVEYYEAGIEKEPKDCAR 121 Query: 88 NCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKK 138 K + DV +A++A + LE ++ + D + ++ +K Sbjct: 122 VKVWKLEEKQSDVNIAIEAVYDAVMDHTLEQIIFVTNDTDIVPALEKIREHNQK 175 >gi|300933129|ref|ZP_07148385.1| hypothetical protein CresD4_03618 [Corynebacterium resistens DSM 45100] Length = 240 Score = 43.1 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 41/120 (34%), Gaps = 25/120 (20%) Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE------GLEHLV 117 P ++ L GF V AK K + D ++ D + L+ +V Sbjct: 112 RPWVEALRNVGFAVFAKP-------------KLTEDSDVDPDMLDHIRLRHQQGTLDGVV 158 Query: 118 IFSGDG-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 + S DG F + L + VT++ + L +A F+DL + Sbjct: 159 VASADGQNFQDFLEELAEE-IPVTVLGF----QEHTTWALVSEAIEFIDLEDIPGVFREP 213 >gi|77458643|ref|YP_348149.1| hypothetical protein Pfl01_2418 [Pseudomonas fluorescens Pf0-1] gi|77382646|gb|ABA74159.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1] Length = 247 Score = 43.1 bits (100), Expect = 0.016, Method: Composition-based stats. Identities = 12/70 (17%), Positives = 25/70 (35%), Gaps = 6/70 (8%) Query: 94 VKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151 + +D+ + VD S + ++ +V+ +GD F +R+ + Sbjct: 156 RQKGVDMRIGVDVASLSFKQQVDQIVLIAGDADFVPAAKMARREGVDFIL----DPMWQS 211 Query: 152 ASDQLRRQAD 161 D L D Sbjct: 212 IPDSLMEHID 221 >gi|302801828|ref|XP_002982670.1| hypothetical protein SELMODRAFT_58009 [Selaginella moellendorffii] gi|300149769|gb|EFJ16423.1| hypothetical protein SELMODRAFT_58009 [Selaginella moellendorffii] Length = 153 Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats. Identities = 28/165 (16%), Positives = 53/165 (32%), Gaps = 26/165 (15%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDI--DYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58 M K +++ D N + F I + +L AF + + Y Sbjct: 1 MEASVAKTSVWWDIENCRPPADVNPFHIARNISNVLHAFNFFGPLTISAY--------GD 52 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA---FEQSEGLEH 115 + + + L G + K + D + ++ + + Sbjct: 53 TYQLTRHVQNALTSTGISLNHIP----------SGRKEASDKAILMNMAFWTSDNPPPAN 102 Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160 +V+ SGD F+ L+ LQ K V +V + S+ L A Sbjct: 103 VVLISGDQDFSPLLHRLQMKRFNVLLV---RPEGVHVSESLLNSA 144 >gi|260886456|ref|ZP_05897719.1| conserved hypothetical protein [Selenomonas sputigena ATCC 35185] gi|260863838|gb|EEX78338.1| conserved hypothetical protein [Selenomonas sputigena ATCC 35185] Length = 241 Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 49/164 (29%), Gaps = 32/164 (19%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 E +A+ D N D K K F R IV+ + Sbjct: 6 STETVAVLYDIENAPFEML----DFTLGKARKFFPCRMIVV-------------SDWEKH 48 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSG 121 W ++++ F + + K+S+D L D + + +I + Sbjct: 49 PEQKRWNR-----LMSRKGLTFRQIDRKVDGKNSLDYAL-FDMAKILRDEGVRRFLIVTT 102 Query: 122 DGCFTTLVAALQRKV--KKVTIVSTVLSDPSMASDQLRRQADYF 163 D F + L+ + V T AS LR D F Sbjct: 103 DSDFVAIAQMLRESDTPCHIIGVGTEQ-----ASQSLRDAYDEF 141 >gi|299470313|emb|CBN78363.1| conserved unknown protein [Ectocarpus siliculosus] Length = 588 Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats. Identities = 18/140 (12%), Positives = 38/140 (27%), Gaps = 17/140 (12%) Query: 32 KLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGR 91 +LL++ + + Q + + + + G Sbjct: 298 ELLESIDILDELGTRDVGVIYADWNKTQDWRSELFGRSKARDFKLLQREPLPPGSNPLG- 356 Query: 92 KRVKSSMDVELAVDAFEQSEGLE----HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLS 147 D + + + E + S DG + L A L+ + + V V Sbjct: 357 -------DDTMTAEVLALARSEELNKYEFCLLSADGSLSELAAKLRGEGRAVRGVG---- 405 Query: 148 DPSMASDQLRRQADYFMDLA 167 A ++ D FM + Sbjct: 406 -RRQAPEEFLDNCDTFMYID 424 >gi|330838781|ref|YP_004413361.1| Domain of unknown function DUF88 [Selenomonas sputigena ATCC 35185] gi|329746545|gb|AEB99901.1| Domain of unknown function DUF88 [Selenomonas sputigena ATCC 35185] Length = 242 Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 49/164 (29%), Gaps = 32/164 (19%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 E +A+ D N D K K F R IV+ + Sbjct: 7 STETVAVLYDIENAPFEML----DFTLGKARKFFPCRMIVV-------------SDWEKH 49 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSG 121 W ++++ F + + K+S+D L D + + +I + Sbjct: 50 PEQKRWNR-----LMSRKGLTFRQIDRKVDGKNSLDYAL-FDMAKILRDEGVRRFLIVTT 103 Query: 122 DGCFTTLVAALQRKV--KKVTIVSTVLSDPSMASDQLRRQADYF 163 D F + L+ + V T AS LR D F Sbjct: 104 DSDFVAIAQMLRESDTPCHIIGVGTEQ-----ASQSLRDAYDEF 142 >gi|332974390|gb|EGK11317.1| hypothetical protein HMPREF0476_0432 [Kingella kingae ATCC 23330] Length = 162 Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats. Identities = 8/81 (9%), Positives = 29/81 (35%), Gaps = 9/81 (11%) Query: 92 KRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSD 148 + +D+++ +D + V+ + D F + + + ++ + + Sbjct: 84 NITQKGVDMKIGLDMATLALKKASGRDFVLVTADSDFVPAIKLARMEGVQIFLAHLGHTV 143 Query: 149 PSMASDQLRRQADYFMDLAYL 169 +L+ +D + L + Sbjct: 144 KP----ELKEHSD--VLLDNI 158 >gi|300859364|ref|YP_003784347.1| hypothetical protein cpfrc_01947 [Corynebacterium pseudotuberculosis FRC41] gi|300686818|gb|ADK29740.1| hypothetical protein cpfrc_01947 [Corynebacterium pseudotuberculosis FRC41] gi|302207047|gb|ADL11389.1| Conserved hypothetical protein [Corynebacterium pseudotuberculosis C231] gi|302331607|gb|ADL21801.1| Conserved hypothetical protein [Corynebacterium pseudotuberculosis 1002] gi|308277300|gb|ADO27199.1| Conserved hypothetical protein [Corynebacterium pseudotuberculosis I19] Length = 219 Score = 42.7 bits (99), Expect = 0.020, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 44/117 (37%), Gaps = 13/117 (11%) Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 + P ++ L GF V AK + D+ + Q+ L+ LV+ S Sbjct: 86 NVRPWVEALRNIGFAVFAKP-------KLSEETDVDPDMLAHIRLRHQAGKLKGLVVASA 138 Query: 122 DG-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 DG F + L + VT++ +D+ A F+DL + RDP Sbjct: 139 DGQNFKDTLDELAAEGVAVTVLGFHEHASWAVADE----ALTFVDLEEVPGVF-RDP 190 >gi|218200714|gb|EEC83141.1| hypothetical protein OsI_28326 [Oryza sativa Indica Group] Length = 523 Score = 42.7 bits (99), Expect = 0.022, Method: Composition-based stats. Identities = 30/161 (18%), Positives = 53/161 (32%), Gaps = 21/161 (13%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +A+F D N S D+ + A R +V A + GD + L Sbjct: 45 VAIFWDIENCPVPSDVRPEDV-AGNVRMALRLHPVVKGAVTMLSAYGDFN---AFPRRLR 100 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGC 124 + G ++V K + D + VD F + +++ SGD Sbjct: 101 EGCQRTGVKLVDVP----------NGRKDAADKAILVDMFLFALDNRPPSSIMLISGDVD 150 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165 F + L ++ +++ S S L A F+ Sbjct: 151 FAPALHILGQRG-YTIVLAIPSSV--TVSSAL-SSAGTFVW 187 >gi|170691868|ref|ZP_02883032.1| conserved hypothetical protein [Burkholderia graminis C4D1M] gi|170143152|gb|EDT11316.1| conserved hypothetical protein [Burkholderia graminis C4D1M] Length = 242 Score = 42.7 bits (99), Expect = 0.022, Method: Composition-based stats. Identities = 8/54 (14%), Positives = 23/54 (42%), Gaps = 2/54 (3%) Query: 85 FTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKV 136 ++ + +D+ + VD + + ++ +V+ +GD F +R+ Sbjct: 152 REDDVTIDIRQKGVDMRIGVDVSSLAFKKQVDQIVLMAGDADFVPAAKQARREG 205 >gi|317181056|dbj|BAJ58842.1| hypothetical protein HPF32_1260 [Helicobacter pylori F32] Length = 213 Score = 42.7 bits (99), Expect = 0.023, Method: Composition-based stats. Identities = 20/177 (11%), Positives = 53/177 (29%), Gaps = 46/177 (25%) Query: 6 EKIALFIDGANLYASSKAL--GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 +K+A+ +DG K+ +D + L ++ + R ++Y D + + Sbjct: 3 KKVAILVDGDFFIRCYKSHLKKQSVDKYEDLNPKKNDEELYRIFFYDCKPLDKKVHYPHT 62 Query: 64 HPLLDWLHYNGFQVVAKVAKEF-------------------------------------- 85 LD + ++ + K Sbjct: 63 QRALDLSKSSTYKERTALHKHLISKPCLALRLGYLDANNARWVIHNKEKEKKLFKGEIYI 122 Query: 86 ----TENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136 ++ + +D+++ +D + ++ +V+ SGD F + + Sbjct: 123 ADFTNDDFIYHAKQKGVDIKIGLDIATLALKKLVQKIVLISGDSDFVPAAKLARVEG 179 >gi|255659675|ref|ZP_05405084.1| histone H1-II [Mitsuokella multacida DSM 20544] gi|260848240|gb|EEX68247.1| histone H1-II [Mitsuokella multacida DSM 20544] Length = 336 Score = 42.7 bits (99), Expect = 0.023, Method: Composition-based stats. Identities = 29/159 (18%), Positives = 46/159 (28%), Gaps = 29/159 (18%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 + + D N R R + PEQ+ Sbjct: 10 VGILYDIENAPFEMLNYTLGK---------ARRFQPCRTIVISDWEERPEQKRWE----- 55 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA-FEQSEGLEHLVIFSGDGCFT 126 +++ + F + K+S+D L A EG+ I + D F Sbjct: 56 --------KLLRRPGFTFRQISRTFLGKNSLDSALYDSAKLLYEEGVRRYFIITTDSDFV 107 Query: 127 TLVAALQRKVK-KVTIVSTVLSDPSMASDQLRRQADYFM 164 + L K K + V T AS+ LR D F+ Sbjct: 108 RIAQMLNSKEKSYIIGVGTKQ-----ASETLRNAYDEFI 141 >gi|241664407|ref|YP_002982767.1| hypothetical protein Rpic12D_2825 [Ralstonia pickettii 12D] gi|240866434|gb|ACS64095.1| conserved hypothetical protein [Ralstonia pickettii 12D] Length = 244 Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats. Identities = 12/72 (16%), Positives = 27/72 (37%), Gaps = 5/72 (6%) Query: 94 VKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151 + +D+ + VD + + ++ +V+ +GD F +R+ + P Sbjct: 159 RQKGVDMRIGVDVSSLAFKQQVDQIVLIAGDADFVPAAKQARREGIDFILDPMWQGIPPN 218 Query: 152 AS---DQLRRQA 160 + D LR Sbjct: 219 LNEHIDGLRSTC 230 >gi|222640135|gb|EEE68267.1| hypothetical protein OsJ_26494 [Oryza sativa Japonica Group] Length = 523 Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats. Identities = 30/161 (18%), Positives = 53/161 (32%), Gaps = 21/161 (13%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +A+F D N S D+ + A R +V A + GD + L Sbjct: 45 VAIFWDIENCPVPSDVRPEDV-AGNVRMALRLHPVVKGAVTMLSAYGDFN---AFPRRLR 100 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGC 124 + G ++V K + D + VD F + +++ SGD Sbjct: 101 EGCQRTGVKLVDVP----------NGRKDAADKAILVDMFLFALDNRPPSSIMLISGDVD 150 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165 F + L ++ +++ S S L A F+ Sbjct: 151 FAPALHILGQRG-YTIVLAIPSSV--TVSSAL-SSAGSFVW 187 >gi|115475405|ref|NP_001061299.1| Os08g0230500 [Oryza sativa Japonica Group] gi|38175445|dbj|BAD01251.1| unknown protein [Oryza sativa Japonica Group] gi|113623268|dbj|BAF23213.1| Os08g0230500 [Oryza sativa Japonica Group] Length = 530 Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats. Identities = 30/161 (18%), Positives = 53/161 (32%), Gaps = 21/161 (13%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +A+F D N S D+ + A R +V A + GD + L Sbjct: 52 VAIFWDIENCPVPSDVRPEDV-AGNVRMALRLHPVVKGAVTMLSAYGDFN---AFPRRLR 107 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGC 124 + G ++V K + D + VD F + +++ SGD Sbjct: 108 EGCQRTGVKLVDVP----------NGRKDAADKAILVDMFLFALDNRPPSSIMLISGDVD 157 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165 F + L ++ +++ S S L A F+ Sbjct: 158 FAPALHILGQRG-YTIVLAIPSSV--TVSSAL-SSAGSFVW 194 >gi|297597805|ref|NP_001044557.2| Os01g0805100 [Oryza sativa Japonica Group] gi|55296825|dbj|BAD68169.1| unknown protein [Oryza sativa Japonica Group] gi|255673790|dbj|BAF06471.2| Os01g0805100 [Oryza sativa Japonica Group] Length = 259 Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats. Identities = 20/192 (10%), Positives = 55/192 (28%), Gaps = 24/192 (12%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M + +++A +ID +L + + + + + ++ + + V + Sbjct: 38 MPEEGKRLAFYIDIEHLQSVVGIVEHK-RFWEDWDKWGAQGQLGVRIIEDSRVAPTKFSK 96 Query: 61 SPL-------------HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAF 107 S + + V+ + + + VD Sbjct: 97 SRDPLIVRKFGDVEPGNYWYNVCEGEAEHVLRPPQGAIRTAPSLMDIVDGIISRMQVD-- 154 Query: 108 EQSEGLEHLVIFSGDGCF-TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 + + + DG + L ++V + ++ + D L+ + L Sbjct: 155 -----FDSVHVGGNDGNLRRRIEERLNGGGRQVYVAGEGINVVLL--DALKAKYSSVHYL 207 Query: 167 AYLKNEIARDPD 178 + ARD Sbjct: 208 DAFEELWARDSK 219 >gi|254779696|ref|YP_003057802.1| hypothetical protein HELPY_1119 [Helicobacter pylori B38] gi|254001608|emb|CAX29697.1| Conserved hypothetical protein [Helicobacter pylori B38] Length = 263 Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats. Identities = 31/214 (14%), Positives = 63/214 (29%), Gaps = 63/214 (29%) Query: 10 LFIDGANLYASSKAL----------GFDID-----YRKLLKAFRSRAIVIRAYYYTTVV- 53 +F+D NL A KA+ F+ + + + R Y+Y + Sbjct: 8 IFVDWENLLADLKAIQETDERLKEPNFNFNNPDQLLALIRSFLEPEEELKRIYFYVSEPF 67 Query: 54 ----------GDPEQQFSPLHPLLDWLHYNGF----------------------QVVAKV 81 + E + D+ +V K Sbjct: 68 TEVEPRIKGNKNEELEEYKEKNPKDYEERVNKSGIIQSFNHEIAQQNQVELRVGRVKFKF 127 Query: 82 AKEFTEN------------CGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTT 127 +F + K + +DV LA D ++ +++FS D F Sbjct: 128 VYKFEDKEVCNGLEAKIFIPYLKLRQKQVDVLLAHDITRLYCTKQGGCILLFSRDTDFVP 187 Query: 128 LVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 ++ A K +V ++ + P+ L++ + Sbjct: 188 VLEAAWEKGFEV-FIANIQESPNSVPSDLKKSCN 220 >gi|15612138|ref|NP_223790.1| hypothetical protein jhp1073 [Helicobacter pylori J99] gi|4155667|gb|AAD06653.1| putative [Helicobacter pylori J99] Length = 285 Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats. Identities = 30/236 (12%), Positives = 69/236 (29%), Gaps = 64/236 (27%) Query: 10 LFIDGANLYASSKAL----------GFDID-----YRKLLKAFRSRAIVIRAYYYTTVV- 53 +F+D NL A KA+ F+ + + + R Y+Y + Sbjct: 30 IFVDWENLLADLKAIQETDERLKESNFNFNNPEQLLALIRSFLEPEEELKRIYFYVSEPF 89 Query: 54 --------------------------GDPEQQFSPLHPLLDWLHYNG----------FQV 77 + + + + F Sbjct: 90 TEVEPRIKSNKKEELEEYKEKNPKEYEEKVNKSGIIQSFNHAIAQQNQVKLRVGRVRFMF 149 Query: 78 VAKVAKEFTEN--------CGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTT 127 + + + +D LA D + ++ L +V+FS D F Sbjct: 150 KDMPKDQRVHGGLEAEILIPHLELRQKQIDALLAHDITKLYCTKPLGCVVLFSKDTDFVP 209 Query: 128 LVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD-YFMDLAYLKNEIARDPDEDKK 182 ++ A K +V ++ + P+ L++ + ++A + + + ++ KK Sbjct: 210 VLEAAWEKGFEV-FIANIQESPNSVPSDLKKSCNVRERNVAEIVDNLPKNQYTPKK 264 >gi|119961979|ref|YP_948879.1| hypothetical protein AAur_3182 [Arthrobacter aurescens TC1] gi|119948838|gb|ABM07749.1| conserved hypothetical protein [Arthrobacter aurescens TC1] Length = 170 Score = 42.3 bits (98), Expect = 0.027, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 29/87 (33%), Gaps = 10/87 (11%) Query: 77 VVAKVAKEFTENCGRKRVKSSMDVEL--AVDAFEQSEGLEHLVIFSGDGCFTTLVAALQR 134 V+ + + G + D L A+D S LVI SGDG FT L R Sbjct: 73 VLPRQGIQRVVGSG----QDGADNALLHAIDITHDSRRFSRLVIGSGDGIFTELALKAAR 128 Query: 135 KVKKVTIVSTVLSDPSMASDQLRRQAD 161 +V V S +L Sbjct: 129 NGMEVEQVV----GRGRPSRRLMAACT 151 >gi|302339827|ref|YP_003805033.1| hypothetical protein Spirs_3345 [Spirochaeta smaragdinae DSM 11293] gi|301637012|gb|ADK82439.1| hypothetical protein Spirs_3345 [Spirochaeta smaragdinae DSM 11293] Length = 332 Score = 42.3 bits (98), Expect = 0.027, Method: Composition-based stats. Identities = 22/139 (15%), Positives = 38/139 (27%), Gaps = 17/139 (12%) Query: 31 RKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCG 90 + LL S + A Y + LH F+++ Sbjct: 25 KGLLDYVHSYGRISIARVYGDFAKN------RFARAAAELHRESFEMIHIP-------DS 71 Query: 91 RKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS 150 K + ++ L++ SG F L+ L+ + + Sbjct: 72 AKEEYPDTITGGVIALLALHPHIDQLLLISGRKSFAPLLRQLRTLDLETMVFCDARKAD- 130 Query: 151 MASDQLRRQADYFMDLAYL 169 +QL AD F D L Sbjct: 131 ---EQLLLLADDFGDFRDL 146 >gi|326427441|gb|EGD73011.1| hypothetical protein PTSG_04720 [Salpingoeca sp. ATCC 50818] Length = 615 Score = 42.3 bits (98), Expect = 0.027, Method: Composition-based stats. Identities = 23/150 (15%), Positives = 48/150 (32%), Gaps = 21/150 (14%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKL---LKAFRSRAIVI--RAYYYTTVVGDPEQQ 59 + + L IDG + ++ + DY ++ + V +Y+ D Sbjct: 26 QRRAVLMIDGGYMR-NADSTSVFSDYDRIQWIMHKIAEDFDVEFEELHYFDADFSDSPAH 84 Query: 60 -------FSPLHPLLDWLHYNGFQVVAKVAKE------FTENCGRKRVKSSMDVELAVDA 106 L L+ L K R +++ +DV A Sbjct: 85 HGISKSGKKSLVTLVKVLRRAHVFCHILPLKYKTTTCSRCHAQNRNLMQAGVDVAFATHM 144 Query: 107 FEQS--EGLEHLVIFSGDGCFTTLVAALQR 134 + + G++ +V++ GDG F + + Sbjct: 145 IKVALKPGIDTIVLWCGDGDFFEAMKMCRE 174 >gi|256824702|ref|YP_003148662.1| hypothetical protein Ksed_08430 [Kytococcus sedentarius DSM 20547] gi|256688095|gb|ACV05897.1| hypothetical protein Ksed_08430 [Kytococcus sedentarius DSM 20547] Length = 190 Score = 42.3 bits (98), Expect = 0.028, Method: Composition-based stats. Identities = 24/168 (14%), Positives = 54/168 (32%), Gaps = 34/168 (20%) Query: 10 LFIDGANLYASSKA-LGF--DIDYRKLLKAFRSR-----AIVIRAYYYTTVVGDPEQQFS 61 L +DG N+ A+ LG D R + + + ++ D Sbjct: 12 LLVDGENIDATLGNCLGRRPQPDERPRWERLLTHVQSSWEQPVTGLFFLAASEDHLP--- 68 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 + L G++ + + +D+ + +E + +V+ S Sbjct: 69 --MNFVQALMAIGYKPIPL---------SGAADEKVVDIAIQKTLEALAERSDDVVLVSH 117 Query: 122 DGCFTTLVAALQ-RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 DG F + AL + +++ ++ + R F++L Sbjct: 118 DGDFLPQMTALLDDEDRRLGLMGF---------REYRNA--GFVELEE 154 >gi|239918681|ref|YP_002958239.1| hypothetical protein Mlut_22170 [Micrococcus luteus NCTC 2665] gi|239839888|gb|ACS31685.1| hypothetical protein Mlut_22170 [Micrococcus luteus NCTC 2665] Length = 247 Score = 42.3 bits (98), Expect = 0.029, Method: Composition-based stats. Identities = 24/181 (13%), Positives = 49/181 (27%), Gaps = 52/181 (28%) Query: 8 IALFIDGANLYASSKALGFDIDYR----KLLKAFRSRAIVIRAYYYTTVVGDPE------ 57 A+ +DG + L D +LL+ R R+ Y D Sbjct: 7 TAILVDGGFYRKRAARLFGHKDPEARADELLEYCRRHTRKTRSRLYRIFYYDCPPSEKVV 66 Query: 58 --------------QQFSPLHPLLDWLHYN---------------GFQVVAKVAKEF--- 85 + + L G+Q+ A+ K+ Sbjct: 67 YHPLTQKSVNLAKTDDYRWMTDFHAALLKKRKVALRRGETLETQSGYQIKAQPLKKLLRG 126 Query: 86 --------TENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRK 135 ++ + +D+ + +D + E + +++ SGD F +R Sbjct: 127 EISVADLEADDFLLDITQKGVDMRVGLDIAALAATEPVNQIIMISGDSDFVPAGKHARRS 186 Query: 136 V 136 Sbjct: 187 G 187 >gi|284988699|ref|YP_003407253.1| hypothetical protein Gobs_0072 [Geodermatophilus obscurus DSM 43160] gi|284061944|gb|ADB72882.1| hypothetical protein Gobs_0072 [Geodermatophilus obscurus DSM 43160] Length = 268 Score = 42.3 bits (98), Expect = 0.029, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 43/108 (39%), Gaps = 12/108 (11%) Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 L ++ L GF V A+ ++ + ++ +D +D S L LV+FSG Sbjct: 130 SLQRWVEALRGFGFAVFARPKQQPDD----DIDQAMLD---HIDVRRHSHRLRRLVVFSG 182 Query: 122 DG-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 DG F + L R +VT+V+ L F+D+ Sbjct: 183 DGRNFAEPLEELARTGTQVTVVAFSEVAGYAIGSDLL----EFIDIED 226 >gi|320537841|ref|ZP_08037758.1| hypothetical protein HMPREF9554_02512 [Treponema phagedenis F0421] gi|320145310|gb|EFW37009.1| hypothetical protein HMPREF9554_02512 [Treponema phagedenis F0421] Length = 250 Score = 42.3 bits (98), Expect = 0.032, Method: Composition-based stats. Identities = 13/127 (10%), Positives = 37/127 (29%), Gaps = 2/127 (1%) Query: 17 LYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQ 76 LY D + + + + + + L + + F Sbjct: 81 LYHPVLEKSIDFSKTETYTWMKEFIENLIHQRKVALRMGVLADNTAYYGLKNEIAKKLFS 140 Query: 77 VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQR 134 +V + + +D+++ +D + + +V+ +GD F +R Sbjct: 141 GRLQVTDITETDFDLVLRQKGVDMKIGIDIATLAYKKLADQIVLITGDSDFVPAAKLARR 200 Query: 135 KVKKVTI 141 + + Sbjct: 201 EGIDFIV 207 >gi|300088531|ref|YP_003759053.1| hypothetical protein Dehly_1445 [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299528264|gb|ADJ26732.1| conserved hypothetical protein [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 241 Score = 42.3 bits (98), Expect = 0.033, Method: Composition-based stats. Identities = 32/213 (15%), Positives = 57/213 (26%), Gaps = 56/213 (26%) Query: 7 KIALFIDGANLYASSKAL--GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ---FS 61 K ++IDG NLY + ++ ++ + + + Y+T V Sbjct: 2 KTNVYIDGFNLYYGALKYTGYKWLNLYEMCRRLFPSDSINKIRYFTARVKPSPHDINAPV 61 Query: 62 PLHPLLDWLH----------------------------------YNGFQVVAKVAKEF-- 85 L L ++ K + Sbjct: 62 RQDIYLRALRTIPEITIFEGRYVQHPTLAAQYPLVYLNHPKKHTALKPSIITKPEFAYMA 121 Query: 86 ----------TENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFT-TLVAAL 132 KR + DV LA E V+ S D + + Sbjct: 122 DGCSLPSSSPICTYILKREEKGSDVNLASMLLSDCYEGDFEKAVVISNDSDLCMPIELVM 181 Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165 +R + VT+V D S S L+ A +++ Sbjct: 182 RRCNRPVTVV--NPHDKSYQSVHLKNIAGNYLN 212 >gi|51209447|ref|YP_063410.1| cpp15 [Campylobacter coli] gi|39979655|gb|AAR29499.1| cpp15 [Campylobacter coli] gi|315059224|gb|ADT73552.1| cpp15 [Campylobacter jejuni subsp. jejuni S3] Length = 242 Score = 41.9 bits (97), Expect = 0.033, Method: Composition-based stats. Identities = 14/99 (14%), Positives = 34/99 (34%), Gaps = 3/99 (3%) Query: 44 IRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEF-TENCGRKRVKSSMDVEL 102 +R Y V + S D+ + E +E+ + +D+++ Sbjct: 109 LRKQPYFAVRLGEIDENSFQWKFRDYDKFRKILRKEIDICELTSEDFVLDIKQKGVDMKI 168 Query: 103 AVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKV 139 +D + E +++ + D F V +++ V Sbjct: 169 GLDIATLANKHHAEKIILITADSDFIPAVKHARKEGIIV 207 >gi|192361640|ref|YP_001984103.1| hypothetical protein CJA_3650 [Cellvibrio japonicus Ueda107] gi|190687805|gb|ACE85483.1| conserved hypothetical protein [Cellvibrio japonicus Ueda107] Length = 281 Score = 41.9 bits (97), Expect = 0.034, Method: Composition-based stats. Identities = 9/50 (18%), Positives = 22/50 (44%), Gaps = 2/50 (4%) Query: 94 VKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTI 141 + +D+ + VD + + ++ LV+ +GD F +R+ + Sbjct: 187 KQKGVDMRIGVDIASLALKKQVDTLVLVAGDSDFVPAAKLARREGIDFIL 236 >gi|237751873|ref|ZP_04582353.1| conserved hypothetical protein [Helicobacter winghamensis ATCC BAA-430] gi|229376706|gb|EEO26797.1| conserved hypothetical protein [Helicobacter winghamensis ATCC BAA-430] Length = 242 Score = 41.9 bits (97), Expect = 0.035, Method: Composition-based stats. Identities = 14/99 (14%), Positives = 32/99 (32%), Gaps = 3/99 (3%) Query: 44 IRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVEL 102 +R Y V + S D+ + E T + +D+++ Sbjct: 109 LRKQPYFAVRLGEIDENSFQWKFRDYDKFRKILRKEIDIGELTNEDFVLDIKQKGVDMKI 168 Query: 103 AVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKV 139 +D + E +++ + D F V +++ V Sbjct: 169 GLDIATLANKHQAEKIILITADSDFIPAVKHARKEGIIV 207 >gi|292670860|ref|ZP_06604286.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541] gi|292647481|gb|EFF65453.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541] Length = 286 Score = 41.9 bits (97), Expect = 0.036, Method: Composition-based stats. Identities = 27/167 (16%), Positives = 45/167 (26%), Gaps = 30/167 (17%) Query: 1 MFDP-REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 M D + +A+ D N + +A Y Sbjct: 1 MLDSSNDTVAILYDIENAPIEMLQY-----------------TIDKAQRYQPCRMIIVSD 43 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA-FEQSEGLEHLVI 118 + W + F + K+S+D L A EG+ I Sbjct: 44 WEAHPEQKRWDRLMQY-----PDFTFRQISRTFYGKNSLDSALYDSAQILYQEGVRKYFI 98 Query: 119 FSGDGCFTTLVAALQRKV-KKVTIVSTVLSDPSMASDQLRRQADYFM 164 + D F + +L + + V T AS+ LR + F Sbjct: 99 ITTDSDFVRIAESLNAEDPSYIIGVGTKQ-----ASEDLRNAYNEFF 140 >gi|207721985|ref|YP_002252423.1| hypothetical protein (partial sequence c terminus) [Ralstonia solanacearum MolK2] gi|206587158|emb|CAQ17742.1| hypothetical protein (partial sequence c terminus) [Ralstonia solanacearum MolK2] Length = 175 Score = 41.9 bits (97), Expect = 0.037, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 29/75 (38%), Gaps = 3/75 (4%) Query: 89 CGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRK-VKKVTIVSTV 145 + + DV LA+ A+ + ++H+VI S D + ++ V +V Sbjct: 2 PIWRLEEKQTDVNLALHAYHDAMTAQVDHVVIASNDTDLVPALRMIREHTSVTVGLVIPT 61 Query: 146 LSDPSMASDQLRRQA 160 ++ L + A Sbjct: 62 RDSERRPNEDLAKYA 76 >gi|121608659|ref|YP_996466.1| hypothetical protein Veis_1693 [Verminephrobacter eiseniae EF01-2] gi|121553299|gb|ABM57448.1| conserved hypothetical protein [Verminephrobacter eiseniae EF01-2] Length = 236 Score = 41.9 bits (97), Expect = 0.041, Method: Composition-based stats. Identities = 7/45 (15%), Positives = 20/45 (44%), Gaps = 2/45 (4%) Query: 94 VKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKV 136 + +D+ + +D + ++ +V+ +GD F +R+ Sbjct: 147 RQKGVDMRIGIDIASLAFKRQVDQIVLVAGDADFVPAAKLARREG 191 >gi|269957712|ref|YP_003327501.1| hypothetical protein Xcel_2936 [Xylanimonas cellulosilytica DSM 15894] gi|269306393|gb|ACZ31943.1| conserved hypothetical protein [Xylanimonas cellulosilytica DSM 15894] Length = 186 Score = 41.9 bits (97), Expect = 0.042, Method: Composition-based stats. Identities = 22/153 (14%), Positives = 46/153 (30%), Gaps = 9/153 (5%) Query: 4 PREKIALFIDGANLYASS--KALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + K L +DG N+ A+ LG + + R R + V + Sbjct: 2 SQRKTYLLVDGENIDATLGMNVLGRRPNPDE-------RPRWDRITAFAAQVWGQDVVPL 54 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 F + +D+ + +E +++ S Sbjct: 55 FFLNATSGQMPMPFVQALLAMGYRPIPLAGSATEKVVDIGIQRTLDALAERDGDVLLASH 114 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASD 154 DG F + AL +KV +++ + ++ Sbjct: 115 DGDFLPQIEALLGSDRKVGLLAFREFVNAKFAE 147 >gi|320531414|ref|ZP_08032380.1| hypothetical protein HMPREF9057_00244 [Actinomyces sp. oral taxon 171 str. F0337] gi|320136367|gb|EFW28349.1| hypothetical protein HMPREF9057_00244 [Actinomyces sp. oral taxon 171 str. F0337] Length = 208 Score = 41.5 bits (96), Expect = 0.046, Method: Composition-based stats. Identities = 22/160 (13%), Positives = 45/160 (28%), Gaps = 32/160 (20%) Query: 9 ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRA----------IVIRAYYYT 50 A+ +D N++ + L ID + V R + Sbjct: 2 AVVVDYQNVHLTGAGLYTPGCPPEDALIDPYRFASQLAQARNATNDDMHQVEVSRVEVFR 61 Query: 51 TVV-----GDPEQQFSPLHPLLDWLHYNGFQVVAKVAK---EFTENCGR----KRVKSSM 98 + D ++ H+ V + K E+ + R R + + Sbjct: 62 GLPIPEDDSDAYRRNQAQQAQWTRGHHGVVNVTLRPLKYSWEYIDGVRRPVRSSRQEKGV 121 Query: 99 DVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136 DV A+ + + + +V+ S D + R Sbjct: 122 DVLCALMLVDLARCGLYDVVVLASRDTDLAPALDNAARTG 161 >gi|227834183|ref|YP_002835890.1| hypothetical protein cauri_2361 [Corynebacterium aurimucosum ATCC 700975] gi|262183327|ref|ZP_06042748.1| hypothetical protein CaurA7_04992 [Corynebacterium aurimucosum ATCC 700975] gi|227455199|gb|ACP33952.1| hypothetical protein cauri_2361 [Corynebacterium aurimucosum ATCC 700975] Length = 203 Score = 41.5 bits (96), Expect = 0.047, Method: Composition-based stats. Identities = 32/180 (17%), Positives = 53/180 (29%), Gaps = 29/180 (16%) Query: 10 LFIDGANLYASSKA---------LGFDID-YRKLLKAFRSRAIVI-RAYYYTTVVGDPEQ 58 L D N+ A D + L A +T V Sbjct: 7 LVWDAPNMDMGLGAILGGRPTAAYRPRFDAIGRWLVELAFDNDATPEAAVFTNVTPGGAD 66 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVI 118 + P ++ + GF V AK + +D ++ E L +++ Sbjct: 67 ---VIRPWVEAIRNVGFAVFAKP---------KLHEDDDVDPDMVEYIKANRENLSGVIV 114 Query: 119 FSGDG-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 S DG F L+ L ++ AS L F+DL ++ R+P Sbjct: 115 ASADGQNFQHLLEQLNASGLPTCVLGFH----EHASWALTHPDIEFVDLEDIEGVF-REP 169 >gi|332705555|ref|ZP_08425633.1| hypothetical protein LYNGBM3L_08400 [Lyngbya majuscula 3L] gi|332355915|gb|EGJ35377.1| hypothetical protein LYNGBM3L_08400 [Lyngbya majuscula 3L] Length = 475 Score = 41.5 bits (96), Expect = 0.052, Method: Composition-based stats. Identities = 28/139 (20%), Positives = 47/139 (33%), Gaps = 31/139 (22%) Query: 8 IALFI-DGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 IA+ + D NL +++ K L S I I+ + + Sbjct: 134 IAILLLDAENLRLNTET-------EKFLAQICSYPIQIKIAV---------ANWRAMGKY 177 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAV---DAFEQSEGLEHLVIFSGDG 123 LH G++++ K S D ++A F + +++ S DG Sbjct: 178 DTELHSRGYELIHVP-----------PGKDSADFKMATVGASIFIHYPTAKEVLVCSSDG 226 Query: 124 CFTTLVAALQRKVKKVTIV 142 T L LQ KV +V Sbjct: 227 VMTHLCTTLQTHGLKVYLV 245 >gi|330466560|ref|YP_004404303.1| LacI family transcriptional regulator [Verrucosispora maris AB-18-032] gi|328809531|gb|AEB43703.1| transcriptional regulator, laci family protein [Verrucosispora maris AB-18-032] Length = 318 Score = 41.5 bits (96), Expect = 0.056, Method: Composition-based stats. Identities = 21/163 (12%), Positives = 47/163 (28%), Gaps = 30/163 (18%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M P + A F+D N+ + +A ++ R R D Sbjct: 134 MLHPEAQPASFVDVDNVGGARQA----------VEYLAGRGR--RRIATIAGPQDMGAGL 181 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 + L D + GF + + + + E+ L+ + + + Sbjct: 182 ARLSGYRDAVRSAGFG-INPDLIGYGDFSEESGATAM------RHLLERCPDLDAVFVAA 234 Query: 121 GDGCFTTLVAALQRKVKK----VTIVST------VLSDPSMAS 153 F + L+ ++ V ++ + P + S Sbjct: 235 DLMAF-GAMRTLRESGRRIPEDVAVIGFDDAPIARQAVPPLTS 276 >gi|302912167|ref|XP_003050653.1| hypothetical protein NECHADRAFT_85184 [Nectria haematococca mpVI 77-13-4] gi|256731590|gb|EEU44940.1| hypothetical protein NECHADRAFT_85184 [Nectria haematococca mpVI 77-13-4] Length = 733 Score = 41.2 bits (95), Expect = 0.058, Method: Composition-based stats. Identities = 24/197 (12%), Positives = 54/197 (27%), Gaps = 54/197 (27%) Query: 1 MFDPREKI-ALFIDGANLYASS------------------KALGFDIDYRKLLKAFRSRA 41 M + ++I F+D +N++ + + I+ KL+K Sbjct: 2 MTEEDKEICMFFVDDSNIWIEAQKFAASGNSHMPKLTDRDRDPRLRINIGKLVKTLLGGR 61 Query: 42 IVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVE 101 +Y Y + + ++ F+ + + +D Sbjct: 62 FQGTSYLYGSRPPPNDAVWNTFEKY-------NFRTKI--------YNRSRGKEKQVDSA 106 Query: 102 LAVDAFEQSEGLEH----------------LVIFSGDGCFTTLVAALQRKVKKVTIVSTV 145 +A D S L + +GD + +V + + Sbjct: 107 MATDLSHTSTKLSTMADFLPEIKEENKRTVFIAITGDQDMVPPITQALDDGFRVELWA-- 164 Query: 146 LSDPSMASDQLRRQADY 162 S S + R+ A+ Sbjct: 165 --WKSGISSEYRKLANE 179 >gi|190015967|ref|YP_001965175.1| hypothetical protein PNSL1.072 [Rhodococcus sp. NS1] gi|114796807|gb|ABI79400.1| hypothetical protein PNSL1.072 [Rhodococcus sp. NS1] Length = 224 Score = 41.2 bits (95), Expect = 0.058, Method: Composition-based stats. Identities = 19/151 (12%), Positives = 41/151 (27%), Gaps = 18/151 (11%) Query: 5 REKIALFIDGANLYASSK-ALGFDI------------DYRKLLKAFRSRAIVIRAYYYTT 51 R+++ +F+D + S++ A G+ + + L V Sbjct: 37 RDRVDVFLDMGYVIRSARTAFGWRVGSRTPDPLATAREILALRYRSSELGTVHVFDGLHD 96 Query: 52 VVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE 111 P L V + + + + +D LA + + Sbjct: 97 PDRRPLDHHRMLDWKHQVEASGEVIVHLRPLQYLPDGG---FRQKEVDTSLAFAMDDAAR 153 Query: 112 --GLEHLVIFSGDGCFTTLVAALQRKVKKVT 140 E +V F+GD + + Sbjct: 154 SGRTEAIVAFTGDRDLLPAARRVIAADVRFE 184 >gi|57237868|ref|YP_179116.1| hypothetical protein CJE1124 [Campylobacter jejuni RM1221] gi|57166672|gb|AAW35451.1| conserved domain protein [Campylobacter jejuni RM1221] Length = 180 Score = 41.2 bits (95), Expect = 0.059, Method: Composition-based stats. Identities = 7/50 (14%), Positives = 22/50 (44%), Gaps = 2/50 (4%) Query: 92 KRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKV 139 + +D+++ +D + +E +++ + D F V +++ V Sbjct: 96 DIKQKGVDMKIGLDIATLANKHQVEKIILITSDSDFVPAVKHARKEGLIV 145 >gi|207092671|ref|ZP_03240458.1| hypothetical protein HpylHP_07376 [Helicobacter pylori HPKX_438_AG0C1] Length = 120 Score = 41.2 bits (95), Expect = 0.062, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 30/70 (42%), Gaps = 3/70 (4%) Query: 94 VKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151 + +D LA D + ++ +++FS D F ++ A K +V ++ + P Sbjct: 8 RQKQIDALLAHDITKLYCTKQGGCILLFSKDTDFVPVLEAAWEKGFEV-FIAKIKESPIS 66 Query: 152 ASDQLRRQAD 161 L++ D Sbjct: 67 VPSDLKKSCD 76 >gi|326433886|gb|EGD79456.1| hypothetical protein PTSG_10022 [Salpingoeca sp. ATCC 50818] Length = 1243 Score = 41.2 bits (95), Expect = 0.062, Method: Composition-based stats. Identities = 27/179 (15%), Positives = 49/179 (27%), Gaps = 45/179 (25%) Query: 10 LFIDGANLY--------ASS-----KALGFDIDYRKLLKAF-RSRAIVIRAYYYTTVVGD 55 LF+D +N + S + + F I L+ + A+ + + + Sbjct: 8 LFVDDSNFWIEGQKACAHSLGLKEPRDVRFRIHLENLIAFVTVKYGPIKGAHLFASEAFN 67 Query: 56 PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMD----VELAVDAFEQSE 111 + + K + + + +D VELA A E Sbjct: 68 SDGVWRKAKE--------------VKFKVHNFSRSLRGKEKEVDQAVCVELAFQAAVTRE 113 Query: 112 GLEH--LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 E VI +GD V V +++ AD + L Sbjct: 114 RHEEASFVIVTGDRDMMPAVHKALSCGIHVHLLAFSSGL-----------ADQYKHLDK 161 >gi|222624986|gb|EEE59118.1| hypothetical protein OsJ_10996 [Oryza sativa Japonica Group] Length = 1004 Score = 41.2 bits (95), Expect = 0.063, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 39/114 (34%), Gaps = 11/114 (9%) Query: 50 TTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ 109 V H ++ L GF F R R K D ++ VD Sbjct: 22 CGVPPCCRDPHRVAHGVIAALAAAGF---PGPVSIFAYGRRRPRAKDGTDKKMLVDMLFW 78 Query: 110 S---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160 + + ++ SGD F+ L+ L+ K +L+ PS S ++ A Sbjct: 79 AFDNPPPGNYLLISGDQDFSDLLHRLRMKR-----YGILLAQPSNVSSRVLAAA 127 >gi|229844492|ref|ZP_04464632.1| hypothetical protein CGSHi6P18H1_09260 [Haemophilus influenzae 6P18H1] gi|229812741|gb|EEP48430.1| hypothetical protein CGSHi6P18H1_09260 [Haemophilus influenzae 6P18H1] Length = 273 Score = 41.2 bits (95), Expect = 0.066, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 25/58 (43%), Gaps = 2/58 (3%) Query: 86 TENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTI 141 ++ + + S+DV+L +D S ++ +V+ +GD F + K + Sbjct: 150 NDDWYYEITQKSVDVKLGMDITILSYEKLVDVIVLIAGDSDFVPAAKQARIKGVDFIL 207 >gi|242214336|ref|XP_002472991.1| predicted protein [Postia placenta Mad-698-R] gi|220727901|gb|EED81807.1| predicted protein [Postia placenta Mad-698-R] Length = 183 Score = 41.2 bits (95), Expect = 0.069, Method: Composition-based stats. Identities = 16/137 (11%), Positives = 38/137 (27%), Gaps = 19/137 (13%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 + + ++LF D N ++ +LL+ + Y Sbjct: 31 ENSKTVSLFWDMENCGLRLRSKD-GFTIEELLRFAEGFGCLKTLNAYLDKSH------HA 83 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLE---HLVIF 119 L GF ++ ++ +D + D + +V+ Sbjct: 84 TSSSLSAFRSQGFNIIDCP---------HNGERNVVDRRMIDDMMAWAARNPAPVTMVLI 134 Query: 120 SGDGCFTTLVAALQRKV 136 +GD + + L + Sbjct: 135 AGDKDYVKAASTLSTRG 151 >gi|116788141|gb|ABK24771.1| unknown [Picea sitchensis] Length = 393 Score = 41.2 bits (95), Expect = 0.069, Method: Composition-based stats. Identities = 18/153 (11%), Positives = 42/153 (27%), Gaps = 18/153 (11%) Query: 23 ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVA 82 I ++K + R + R ++ G + F + V Sbjct: 135 KFKTHIKFQKHFRQLHEREQLKRLRRLDSLKGKKKDAFRAKIVPKQEKYRVVANQVLVPK 194 Query: 83 --------KEFTENCGRKRVKS--SMDVELAVDAFEQSEG-LEHLVIFSGDGCFTTLVAA 131 + + D+ L + + ++ L + S D F ++ Sbjct: 195 VGYGLAGEIKRAGFWVITVSDKPQAADIALKKHMMDCMDKGIDCLCLVSDDTDFVEVLKV 254 Query: 132 LQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164 + + + +V L+R AD + Sbjct: 255 ARARSLRTVVVGDNAGG-------LKRFADAYF 280 >gi|332673942|gb|AEE70759.1| conserved hypothetical protein [Helicobacter pylori 83] Length = 266 Score = 41.2 bits (95), Expect = 0.070, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 31/70 (44%), Gaps = 3/70 (4%) Query: 94 VKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151 + +D LA D + ++ +++FS D F ++ A K +V I + P++ Sbjct: 155 HQKQIDALLAHDITKLYRTKQGGCILLFSKDTDFVPVLEATWEKGFQVFIANIQEG-PNL 213 Query: 152 ASDQLRRQAD 161 LR+ D Sbjct: 214 VPPDLRKSCD 223 >gi|302785307|ref|XP_002974425.1| hypothetical protein SELMODRAFT_57723 [Selaginella moellendorffii] gi|300158023|gb|EFJ24647.1| hypothetical protein SELMODRAFT_57723 [Selaginella moellendorffii] Length = 152 Score = 40.8 bits (94), Expect = 0.079, Method: Composition-based stats. Identities = 27/164 (16%), Positives = 49/164 (29%), Gaps = 24/164 (14%) Query: 7 KIALFIDGAN--LYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 KI ++ D N + A ++ L++ + V Sbjct: 1 KIGVWWDFENCNVPYGIDAHRVGLNIVSGLRSSGFKGPVSI--------SGYGDMLQLSR 52 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSG 121 + + L G ++ G K + S D L +D + HL + SG Sbjct: 53 CVQESLSATGIRLHHVP-------SGGKESE-SSDRALLMDLILWTIENPPPAHLFLISG 104 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165 D F+T + L+ + V + + S L A Sbjct: 105 DRDFSTALHKLRMRNYNVLLAC---PAGAYISPSLLGAASRVWY 145 >gi|261838472|gb|ACX98238.1| hypothetical protein KHP_1042 [Helicobacter pylori 51] Length = 215 Score = 40.8 bits (94), Expect = 0.079, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 31/75 (41%), Gaps = 3/75 (4%) Query: 89 CGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVL 146 K + +D LA D + ++ +++FS D F ++ A K V I + Sbjct: 98 PHLKLRQKQIDALLAHDITKLYCTKQGGCILLFSKDTDFVPVLEAAWEKGFGVFIANIQE 157 Query: 147 SDPSMASDQLRRQAD 161 P++ LR+ D Sbjct: 158 G-PNLVPPDLRKSCD 171 >gi|330822484|ref|XP_003291681.1| hypothetical protein DICPUDRAFT_99095 [Dictyostelium purpureum] gi|325078117|gb|EGC31786.1| hypothetical protein DICPUDRAFT_99095 [Dictyostelium purpureum] Length = 1309 Score = 40.8 bits (94), Expect = 0.081, Method: Composition-based stats. Identities = 27/178 (15%), Positives = 61/178 (34%), Gaps = 28/178 (15%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 + +F D N S G + + R ++ + + ++ S L Sbjct: 49 VNVFWDLENCAVPSNLKGIHV-VNAIRSFALQRGVLKNISAFANLKLIRDELRSNLQ--- 104 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGC 124 G + + ++ D+ + V+ + + +V+ SGD Sbjct: 105 ----ECGVLLHDV----------TRNKSNASDIAILVEILKLVIDNKPPHCIVLISGDRD 150 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD-YFMDLAYLKNEIARDPDEDK 181 F+ ++ L + +V ++ + ASD L+ A + ++ LK I + P Sbjct: 151 FSNVLNTLTFRRYQVFLI-----HSTHASDVLKYSATASYEWISLLKGTI-KAPSSPP 202 >gi|302866160|ref|YP_003834797.1| periplasmic binding protein/LacI transcriptional regulator [Micromonospora aurantiaca ATCC 27029] gi|315502718|ref|YP_004081605.1| transcriptional regulator, laci family [Micromonospora sp. L5] gi|302569019|gb|ADL45221.1| periplasmic binding protein/LacI transcriptional regulator [Micromonospora aurantiaca ATCC 27029] gi|315409337|gb|ADU07454.1| transcriptional regulator, LacI family [Micromonospora sp. L5] Length = 348 Score = 40.8 bits (94), Expect = 0.082, Method: Composition-based stats. Identities = 23/160 (14%), Positives = 53/160 (33%), Gaps = 28/160 (17%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 M P + A F+D N+ + +A ++ + R D Sbjct: 164 MLHPNAQPAWFVDMDNVGGARQA----------VEHLFRQGR--RRVATIAGPQDMGAGL 211 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKE--FTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVI 118 + L + + G +V + F+E G ++ +DV L+ + + Sbjct: 212 ARLSGYQEAVRAAGGRVDPGLIAYGDFSEGSGTAAMRRLLDV---------CPELDAVFV 262 Query: 119 FSGDGCFTTLVAALQRKVKK----VTIVSTVLSDPSMASD 154 S F + AL+ ++ V ++ + + ++ Sbjct: 263 ASDLMAF-GALRALREAGRRVPEDVAVIGFDDAPIARQAE 301 >gi|47104067|ref|YP_015496.1| hypothetical protein PBPRC0042 [Photobacterium profundum SS9] gi|46911631|emb|CAG17980.1| hypothetical protein [Photobacterium profundum SS9] Length = 317 Score = 40.4 bits (93), Expect = 0.10, Method: Composition-based stats. Identities = 26/174 (14%), Positives = 47/174 (27%), Gaps = 42/174 (24%) Query: 7 KIALFIDGANLYASSKA--LGFDIDYRKLLKA-FRSRAIVIRAYYY-------------- 49 + ++IDG N Y +D KL + R+ V A + Sbjct: 2 RTRIYIDGYNFYYGCLKGTPYKWLDLVKLFEEHIIPRSDVRNATLHDDVGIKYFTAEITN 61 Query: 50 --TTVVGDPEQQFSPLHPLLDWLHYNGFQV--------------------VAKVAKEFTE 87 Q S H L + K K+ Sbjct: 62 KAAADPNSVNDQRSYHHALYLHSENWLKTFKGSYAVDKVEYPKVEHHEAGIEKEPKDCAR 121 Query: 88 NCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKK 138 K + DV +A++A + LE ++ + D + ++ +K Sbjct: 122 VKVWKLEEKQSDVNVAIEAVYDAVMDHTLEQIIFVTNDTDIVPALKKIREHNQK 175 >gi|208435041|ref|YP_002266707.1| hypothetical protein HPG27_1090 [Helicobacter pylori G27] gi|208432970|gb|ACI27841.1| hypothetical protein HPG27_1090 [Helicobacter pylori G27] Length = 295 Score = 40.4 bits (93), Expect = 0.10, Method: Composition-based stats. Identities = 11/79 (13%), Positives = 27/79 (34%), Gaps = 3/79 (3%) Query: 84 EFTENCGRKRVKSSMDVELAVDA--FEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTI 141 T + +D L D + +++FS D F ++ ++ + K Sbjct: 174 IRTNQERLDLRQKGIDTLLVHDIAKICYTATSRCVLLFSKDTDFAPVLKEIREQGFK-IF 232 Query: 142 VSTVLSDPSMASDQLRRQA 160 ++ + P L++ Sbjct: 233 IARIKESPISVPSDLKKSC 251 >gi|134288743|ref|YP_001111040.1| gp9, Cpp15 [Burkholderia phage phiE202] gi|134131956|gb|ABO60704.1| gp9, Cpp15 [Burkholderia phage phiE202] Length = 251 Score = 40.4 bits (93), Expect = 0.10, Method: Composition-based stats. Identities = 7/50 (14%), Positives = 22/50 (44%), Gaps = 2/50 (4%) Query: 94 VKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTI 141 + +D+ + +D + + ++ +V+ +GD F +R+ + Sbjct: 161 RQKGVDMRIGLDVSSLAFKKQVDQIVLIAGDADFVPAAKQARREGIDFIL 210 >gi|330467792|ref|YP_004405535.1| hypothetical protein VAB18032_19165 [Verrucosispora maris AB-18-032] gi|328810763|gb|AEB44935.1| hypothetical protein VAB18032_19165 [Verrucosispora maris AB-18-032] Length = 187 Score = 40.4 bits (93), Expect = 0.11, Method: Composition-based stats. Identities = 19/140 (13%), Positives = 41/140 (29%), Gaps = 11/140 (7%) Query: 10 LFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDW 69 L +DG N+ A+ +L+ + A R D +Q L+ Sbjct: 11 LIVDGENIDATLGN--------SVLERRPAPAERPRWERLREFARDTWRQPVKGLFFLNA 62 Query: 70 LHYNGFQVVAKVAKEFTENC---GRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126 + + +D+ + + ++++ S DG F Sbjct: 63 SGGALPMPFVRALLSMDYRPIPLAGSSDQKVVDIGIQRTLEAIARRSGNVMLASHDGDFL 122 Query: 127 TLVAALQRKVKKVTIVSTVL 146 + L ++V +V Sbjct: 123 PQLGELLEGDRQVAVVGFKE 142 >gi|218768924|ref|YP_002343436.1| hypothetical protein NMA2192 [Neisseria meningitidis Z2491] gi|6900422|emb|CAB72032.1| hypothetical protein [Neisseria meningitidis] gi|121052932|emb|CAM09286.1| conserved hypothetical protein [Neisseria meningitidis Z2491] gi|254671541|emb|CBA09160.1| conserved hypothetical protein [Neisseria meningitidis alpha153] gi|254672832|emb|CBA07007.1| conserved hypothetical protein [Neisseria meningitidis alpha275] gi|308388512|gb|ADO30832.1| hypothetical protein NMBB_0327 [Neisseria meningitidis alpha710] gi|319411222|emb|CBY91629.1| conserved hypothetical protein [Neisseria meningitidis WUE 2594] gi|325131019|gb|EGC53746.1| hypothetical protein NMBOX9930304_0283 [Neisseria meningitidis OX99.30304] gi|325131640|gb|EGC54346.1| gp9, Cpp15 [Neisseria meningitidis M6190] gi|325137119|gb|EGC59715.1| gp9, Cpp15 [Neisseria meningitidis M0579] gi|325139012|gb|EGC61559.1| hypothetical protein NMBES14902_0278 [Neisseria meningitidis ES14902] gi|325199009|gb|ADY94465.1| hypothetical protein NMBG2136_1806 [Neisseria meningitidis G2136] gi|325202880|gb|ADY98334.1| hypothetical protein NMBM01240149_1792 [Neisseria meningitidis M01-240149] gi|325207321|gb|ADZ02773.1| conserved hypothetical protein [Neisseria meningitidis NZ-05/33] Length = 219 Score = 40.4 bits (93), Expect = 0.11, Method: Composition-based stats. Identities = 10/70 (14%), Positives = 24/70 (34%), Gaps = 6/70 (8%) Query: 94 VKSSMDVELAVDA--FEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151 + +D+ + +D + + +++FSGD F +R+ + + Sbjct: 145 KQKGVDMRIGLDISSITLKKQADKIILFSGDSDFVPAAKLARREGIDFIL----DPMWNH 200 Query: 152 ASDQLRRQAD 161 L D Sbjct: 201 VPPDLMEHID 210 >gi|326438113|gb|EGD83683.1| hypothetical protein PTSG_04288 [Salpingoeca sp. ATCC 50818] Length = 841 Score = 40.4 bits (93), Expect = 0.11, Method: Composition-based stats. Identities = 25/178 (14%), Positives = 53/178 (29%), Gaps = 28/178 (15%) Query: 10 LFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDW 69 +F+D +N++ ++ G D + R+ +I +W Sbjct: 367 IFVDNSNIFIGAQLEGSVRDL-AVRVNIRALCEIIEDNMPCAFRAVAGTNPHSGRIWHEW 425 Query: 70 LHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC----- 124 + + + ++ + + +D + + LV+ +GDG Sbjct: 426 ENN-----HYRTLLDRSDASMHNVIAAKID-----EVANSGANPQTLVLATGDGNEVEGN 475 Query: 125 --FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF------MDLAYLKNEIA 174 F L + +V + S S S + R + F L K I Sbjct: 476 ESFPRLAERAIQHGWRVRVWSWEQSL----SGKFRDLKERFNAYVTIHFLDPFKERIT 529 >gi|288947791|ref|YP_003445174.1| hypothetical protein Alvin_3251 [Allochromatium vinosum DSM 180] gi|288898307|gb|ADC64142.1| hypothetical protein Alvin_3251 [Allochromatium vinosum DSM 180] Length = 328 Score = 40.4 bits (93), Expect = 0.11, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 51/157 (32%), Gaps = 23/157 (14%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRS--RAIVIRAYYYTTVVGDPEQQ 59 P +AL+IDG N Y + LL + R V R G + Sbjct: 69 LQPPRSVALYIDGDNQYPAIAR--------DLLASVRQDLGLDVSRVVLAGNDHGHTVPR 120 Query: 60 FSPL--HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLV 117 + L +V K + ++ +EL + +G + +V Sbjct: 121 WQAALAKEGLAEDRILALRVPRKP----------EAADLAVILELGANMERHRQGPDLVV 170 Query: 118 IFSGDGCFTTLVAALQRKVKKVTI-VSTVLSDPSMAS 153 + S D A++ + +V + + + P+ S Sbjct: 171 VVSRDEWLIGAAEAVRARGCRVWVAYAENDAVPAQTS 207 >gi|268317430|ref|YP_003291149.1| hypothetical protein Rmar_1878 [Rhodothermus marinus DSM 4252] gi|262334964|gb|ACY48761.1| protein of unknown function DUF88 [Rhodothermus marinus DSM 4252] Length = 320 Score = 40.4 bits (93), Expect = 0.11, Method: Composition-based stats. Identities = 21/135 (15%), Positives = 40/135 (29%), Gaps = 6/135 (4%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 ALF+D NLY + D L + + Y Sbjct: 13 TALFVDYENLYQQATRYLKRTD---NLNGQLADLLYSLRRYLLARRRFRVVLGRAYADFE 69 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGC 124 + Q V S ++L +DA + ++ V+ SG+ Sbjct: 70 QYDDGLAIQRVLAEQGIVPRMVPSSYEAPSRSLQLTIDALQTLQSHPEVQAFVVVSGNRS 129 Query: 125 FTTLVAALQRKVKKV 139 + L+ L+ +++ Sbjct: 130 YLPLLEHLRGHGRQI 144 >gi|254411600|ref|ZP_05025376.1| protein-glutamate methylesterase CheB [Microcoleus chthonoplastes PCC 7420] gi|196181322|gb|EDX76310.1| protein-glutamate methylesterase CheB [Microcoleus chthonoplastes PCC 7420] Length = 341 Score = 40.4 bits (93), Expect = 0.11, Method: Composition-based stats. Identities = 22/148 (14%), Positives = 47/148 (31%), Gaps = 10/148 (6%) Query: 32 KLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGR 91 +L + + + A YT +P + + NG V + + + Sbjct: 198 RLAERLAQKCQIKVAEGYTLGQLEPGLAWIAPGDYHLIIERNGTGVHLRTHQ----DAPE 253 Query: 92 KRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTI----VSTVLS 147 + ++DV A +++ +++ +V + S V Sbjct: 254 NSCRPAVDVLFRSVAKLYGANTLAIILTGMGQDGRLGCECIRQVGGQVWVQDEATSVVWG 313 Query: 148 DPSMASDQLRRQADYFMDLAYLKNEIAR 175 P M ++ AD + L + EI R Sbjct: 314 MPGMVANS--GLADRVIPLPDIAAEIIR 339 >gi|162455452|ref|YP_001617819.1| Alpha-amylase-family protein [Sorangium cellulosum 'So ce 56'] gi|161166034|emb|CAN97339.1| Alpha-amylase-family protein [Sorangium cellulosum 'So ce 56'] Length = 648 Score = 40.4 bits (93), Expect = 0.11, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 56/162 (34%), Gaps = 22/162 (13%) Query: 12 IDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGD-------PEQQFSPLH 64 DG NL+A ++ G D R+ + A I + +G + Sbjct: 171 YDGVNLFAPTRLYGSPDDLRRFVDAAHRAGIAVILDVVYNHLGPDGNYLGQFSGDYFTDR 230 Query: 65 PLLDWLHYNGFQ-VVAKVAKE-FTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 DW F ++ +E F N G + +D L +DA + ++ S D Sbjct: 231 HKTDWGAAINFDGPRSEAVREYFIANAGYWIDEFHLD-GLRLDATQ------NIYDGSKD 283 Query: 123 GCFTTLVAALQR--KVKKVTIVSTVLSDPSMASDQLRRQADY 162 + ++ K K+ +V+ S + L R A+ Sbjct: 284 HILAAIARRVREAAKGKETFLVAENESQE----EWLIRAAER 321 >gi|217034222|ref|ZP_03439640.1| hypothetical protein HP9810_2g1 [Helicobacter pylori 98-10] gi|216943282|gb|EEC22744.1| hypothetical protein HP9810_2g1 [Helicobacter pylori 98-10] Length = 166 Score = 40.4 bits (93), Expect = 0.11, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 3/75 (4%) Query: 89 CGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVL 146 K + +D+ LA D + ++ +++FS D F ++ A K +V I + Sbjct: 49 PHLKLRQKQIDMLLAHDITKLYCTKQGGCILLFSKDTDFMPVLEAAWEKEFEVFIANIQE 108 Query: 147 SDPSMASDQLRRQAD 161 P++ LR+ D Sbjct: 109 G-PNLVPPDLRKSCD 122 >gi|154483449|ref|ZP_02025897.1| hypothetical protein EUBVEN_01152 [Eubacterium ventriosum ATCC 27560] gi|149735701|gb|EDM51587.1| hypothetical protein EUBVEN_01152 [Eubacterium ventriosum ATCC 27560] Length = 222 Score = 40.4 bits (93), Expect = 0.11, Method: Composition-based stats. Identities = 23/133 (17%), Positives = 48/133 (36%), Gaps = 14/133 (10%) Query: 42 IVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVE 101 +Y + + L D+ + + K+ K K +D + Sbjct: 2 KPNVQEWYDELTEEY--NVKKLMFFGDFNGSAIEKELPKLEKITKNVVHTASTKDGVDKD 59 Query: 102 ----LAVDAF----EQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMAS 153 + +DA + + + VIF+GD F + L+ KKV I S Sbjct: 60 FTDFIILDAIYREAAKKDSPDVFVIFTGDAHFNLAIKYLRELKKKVII----YGVKRSLS 115 Query: 154 DQLRRQADYFMDL 166 ++L+ A+ ++++ Sbjct: 116 NKLKSSANSYVEM 128 >gi|227505008|ref|ZP_03935057.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940] gi|227198372|gb|EEI78420.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940] Length = 92 Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats. Identities = 11/81 (13%), Positives = 27/81 (33%), Gaps = 12/81 (14%) Query: 100 VELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLR 157 + + +D +E + +++ SGD F +R + + S+ L Sbjct: 1 MRIGLDIASLAERGLVNQIIMISGDSDFVPAAKHARRSGIDFIL----DPLWAPVSESLN 56 Query: 158 RQADYFMDLAYLKNEIARDPD 178 D ++ + + P Sbjct: 57 EHVD------GVRECVVKPPK 71 >gi|188527929|ref|YP_001910616.1| hypothetical protein HPSH_05910 [Helicobacter pylori Shi470] gi|188144169|gb|ACD48586.1| hypothetical protein HPSH_05910 [Helicobacter pylori Shi470] Length = 266 Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 3/70 (4%) Query: 94 VKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151 + +D LA D + ++ +++FS D F ++ A K +V I + P++ Sbjct: 155 RQKQIDALLAHDITKLYCTKQGGCILLFSKDTDFVPVLEAAWEKGFEVFIANIQEG-PNL 213 Query: 152 ASDQLRRQAD 161 LR+ Sbjct: 214 VPPDLRKSCS 223 >gi|121635573|ref|YP_975818.1| hypothetical protein NMC1886 [Neisseria meningitidis FAM18] gi|161870771|ref|YP_001599944.1| hypothetical protein NMCC_1852 [Neisseria meningitidis 053442] gi|120867279|emb|CAM11050.1| conserved hypothetical protein [Neisseria meningitidis FAM18] gi|161596324|gb|ABX73984.1| conserved hypothetical protein [Neisseria meningitidis 053442] Length = 219 Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats. Identities = 8/50 (16%), Positives = 21/50 (42%), Gaps = 2/50 (4%) Query: 94 VKSSMDVELAVDA--FEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTI 141 + +D+ + +D + + +++FSGD F +R+ + Sbjct: 145 KQKGVDMRIGLDISSITLKKQADKIILFSGDSDFVPAAKLARREGIDFIL 194 >gi|227500425|ref|ZP_03930487.1| conserved hypothetical protein [Anaerococcus tetradius ATCC 35098] gi|227217488|gb|EEI82807.1| conserved hypothetical protein [Anaerococcus tetradius ATCC 35098] Length = 224 Score = 40.0 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 7/47 (14%), Positives = 22/47 (46%), Gaps = 2/47 (4%) Query: 92 KRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKV 136 + +D+++ +D + + ++ +V+ +GD F +R+ Sbjct: 143 TSKQKGVDMKIGIDIASLAYKKQVDKIVLIAGDSDFVPAAKLARREG 189 >gi|309811372|ref|ZP_07705159.1| conserved hypothetical protein [Dermacoccus sp. Ellin185] gi|308434679|gb|EFP58524.1| conserved hypothetical protein [Dermacoccus sp. Ellin185] Length = 186 Score = 40.0 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 27/172 (15%), Positives = 50/172 (29%), Gaps = 32/172 (18%) Query: 10 LFIDGANLYASSKAL----GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE---QQFSP 62 L IDG N+ A+ D R A ++ G Sbjct: 8 LLIDGENIDATLGTSILGRRPHPDERPRWDRLLKFAQ---RQWHQDAKGLFFLAANGPEL 64 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVEL--AVDAFEQSEGLEHLVIFS 120 + L G+Q + + +D+ + +DA + +++ S Sbjct: 65 PMAFIQALTALGYQPIPL---------SGAEGEKVVDMAIQKTLDALVTLQA--DVMLVS 113 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVL----SDPSMASDQLRRQADYFMDLAY 168 DG F + L +KV ++ + + L F DL + Sbjct: 114 HDGDFLPQLEPLLGGSRKVGLIGFKEFRNAGFSPLEAQGL-----EFFDLEH 160 >gi|312128669|ref|YP_003993543.1| 1-phosphofructokinase [Caldicellulosiruptor hydrothermalis 108] gi|311778688|gb|ADQ08174.1| 1-phosphofructokinase [Caldicellulosiruptor hydrothermalis 108] Length = 315 Score = 40.0 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 25/143 (17%), Positives = 46/143 (32%), Gaps = 24/143 (16%) Query: 11 FIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP----- 65 ID G I+ K++K+ I + D ++ Sbjct: 32 LIDAG---------GKGINVSKVIKSL--GGKSIALGFLGNDNKDWFLKYLKNMQIDYDF 80 Query: 66 -LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG--- 121 +D L ++V K +T+ D+ L D ++ + + + SG Sbjct: 81 IFVDGLTRTNIKIVETAQKVYTDLNQNGFEVKKKDINLLFDKIDRIAKTDDIFVLSGSLP 140 Query: 122 ---DGC-FTTLVAALQRKVKKVT 140 D + L+ L+RK KV Sbjct: 141 PGTDEDVYVELIRMLKRKGAKVI 163 >gi|304436308|ref|ZP_07396286.1| conserved hypothetical protein [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304370713|gb|EFM24360.1| conserved hypothetical protein [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 293 Score = 40.0 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 26/167 (15%), Positives = 45/167 (26%), Gaps = 30/167 (17%) Query: 1 MFDP-REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 M D + +A+ D N + A Y Sbjct: 1 MLDSSNDTVAILYDIENAPIEMLQY-----------------TIDIAQRYQPCRMIVVSD 43 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA-FEQSEGLEHLVI 118 + W ++ F + K+S+D L A EG+ I Sbjct: 44 WEAHPDQKRWDR-----LMESPDFTFRQISRTFLGKNSLDSALYDSAQILYQEGVRKYFI 98 Query: 119 FSGDGCFTTLVAALQRKV-KKVTIVSTVLSDPSMASDQLRRQADYFM 164 + D F + +L + + + T AS+ LR + F Sbjct: 99 ITTDSDFVRIAESLNAEDPSYIIGIGTKQ-----ASEDLRNAYNEFF 140 >gi|332669784|ref|YP_004452792.1| hypothetical protein Celf_1270 [Cellulomonas fimi ATCC 484] gi|332338822|gb|AEE45405.1| hypothetical protein Celf_1270 [Cellulomonas fimi ATCC 484] Length = 191 Score = 40.0 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 22/157 (14%), Positives = 50/157 (31%), Gaps = 28/157 (17%) Query: 10 LFIDGANLYASSKA--------LGFDIDYRKLLKAFRS-RAIVIRAYYYTTVVGDPEQQF 60 L +DG N+ A+ + + ++L + ++A ++ Sbjct: 12 LLVDGENIDATLGSSILGGRPTPEQRPRWERVLGFAQQAWGQPVKALFFLNASNG----- 66 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S + L GF + + + + +DV + + +++ S Sbjct: 67 SLPMSFVQALLAIGFTPIPLSGESY---------EKVVDVGIKRTLEAIAARGGDVLLAS 117 Query: 121 GDGCFTTLVAALQRKV-KKVTIVSTVLSDPSMASDQL 156 DG F V L ++V +++ S L Sbjct: 118 HDGDFAPEVETLVDAGDRRVGLLAF----REFTSTAL 150 >gi|169334288|ref|ZP_02861481.1| hypothetical protein ANASTE_00686 [Anaerofustis stercorihominis DSM 17244] gi|169259005|gb|EDS72971.1| hypothetical protein ANASTE_00686 [Anaerofustis stercorihominis DSM 17244] Length = 233 Score = 40.0 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 22/52 (42%), Gaps = 2/52 (3%) Query: 87 ENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKV 136 + + +D+++ VD + + + +++ SGD F +R+ Sbjct: 139 NDFFIDIKQKGVDMKIGVDIASLAYKKQVSQIILISGDSDFVPAAKLARREG 190 >gi|145301490|ref|YP_001144329.1| hypothetical protein ASA_P5G111 [Aeromonas salmonicida subsp. salmonicida A449] gi|142856372|gb|ABO92581.1| conserved hypothetical protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 240 Score = 40.0 bits (92), Expect = 0.14, Method: Composition-based stats. Identities = 15/110 (13%), Positives = 37/110 (33%), Gaps = 8/110 (7%) Query: 31 RKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCG 90 ++L +A + V R + + + D +H + + + E Sbjct: 89 KELHQALVKQPYVARRMGFLS------KNDRQWKIADDRMHKSLLAGRIQANQIPAEKIV 142 Query: 91 RKRVKSSMDVELAVDA--FEQSEGLEHLVIFSGDGCFTTLVAALQRKVKK 138 + +D++L +D + + +V+ SGD F + + Sbjct: 143 LHAPQKGVDMKLGLDIATLTLKKQVNKIVLISGDSDFVPAAKLARAEGVH 192 >gi|103485875|ref|YP_615436.1| hypothetical protein Sala_0380 [Sphingopyxis alaskensis RB2256] gi|98975952|gb|ABF52103.1| hypothetical protein Sala_0380 [Sphingopyxis alaskensis RB2256] Length = 64 Score = 40.0 bits (92), Expect = 0.15, Method: Composition-based stats. Identities = 6/54 (11%), Positives = 14/54 (25%), Gaps = 8/54 (14%) Query: 132 LQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI---ARDPDEDKK 182 ++ + V + R+ F+ L E +D + Sbjct: 3 IREQGIDVYGFGEQK-----TPESFRQACRRFIYTENLLPEAPTSDEPSRQDAR 51 >gi|108563509|ref|YP_627825.1| hypothetical protein HPAG1_1084 [Helicobacter pylori HPAG1] gi|107837282|gb|ABF85151.1| hypothetical protein HPAG1_1084 [Helicobacter pylori HPAG1] Length = 119 Score = 40.0 bits (92), Expect = 0.15, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 31/70 (44%), Gaps = 3/70 (4%) Query: 94 VKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151 + +D LA D + ++ +++FS D F ++ A K +V ++ + P+ Sbjct: 8 RQKQVDALLAHDITKLYCTKQGGCILLFSRDTDFVPVLEAAWEKGFEV-FIANIQESPNS 66 Query: 152 ASDQLRRQAD 161 L++ + Sbjct: 67 VPSDLKKSCN 76 >gi|322434519|ref|YP_004216731.1| multi-sensor signal transduction histidine kinase [Acidobacterium sp. MP5ACTX9] gi|321162246|gb|ADW67951.1| multi-sensor signal transduction histidine kinase [Acidobacterium sp. MP5ACTX9] Length = 793 Score = 40.0 bits (92), Expect = 0.15, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 3/74 (4%) Query: 103 AVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKK-VTIVSTVLSDPSMASD--QLRRQ 159 D ++ + + SG+ F+ AA+ +K VT+V + M+++ LR Sbjct: 248 VTDILALAQRSDEPMYTSGESDFSLGTAAVIKKGSSAVTVVVGLPLPAGMSANMTSLRTA 307 Query: 160 ADYFMDLAYLKNEI 173 AD + LA + E+ Sbjct: 308 ADAYWRLARSRREV 321 >gi|167838348|ref|ZP_02465207.1| hypothetical protein Bpse38_17705 [Burkholderia thailandensis MSMB43] Length = 172 Score = 40.0 bits (92), Expect = 0.15, Method: Composition-based stats. Identities = 8/58 (13%), Positives = 24/58 (41%), Gaps = 2/58 (3%) Query: 86 TENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTI 141 ++ + +D+ + VD + + ++ +V+ +GD F +R+ + Sbjct: 69 PDDVVVDVRQKGVDMRIGVDVSSLAFKKQVDQIVLVAGDADFVPAAKQARREGIDFIL 126 >gi|259505747|ref|ZP_05748649.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] gi|259166655|gb|EEW51209.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] Length = 228 Score = 40.0 bits (92), Expect = 0.15, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 37/120 (30%), Gaps = 24/120 (20%) Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG------LEHLV 117 P ++ L GF V AK K + D ++ D L +V Sbjct: 92 RPWVEALRNVGFAVFAKP-------------KLTEDSDVDEDMLAHIRRRFEEGVLRGVV 138 Query: 118 IFSGDG-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 + S DG F L+ L T++ + + A F+DL + Sbjct: 139 VASADGQNFRELLEELTGDGIPATVIGFHEHASWAVAHE----AIEFVDLEEIAGVFREP 194 >gi|25029253|ref|NP_739307.1| hypothetical protein CE2697 [Corynebacterium efficiens YS-314] gi|23494541|dbj|BAC19507.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] Length = 234 Score = 40.0 bits (92), Expect = 0.15, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 37/120 (30%), Gaps = 24/120 (20%) Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG------LEHLV 117 P ++ L GF V AK K + D ++ D L +V Sbjct: 98 RPWVEALRNVGFAVFAKP-------------KLTEDSDVDEDMLAHIRRRFEEGVLRGVV 144 Query: 118 IFSGDG-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 + S DG F L+ L T++ + + A F+DL + Sbjct: 145 VASADGQNFRELLEELTGDGIPATVIGFHEHASWAVAHE----AIEFVDLEEIAGVFREP 200 >gi|163781959|ref|ZP_02176959.1| oxaloacetate decarboxylase [Hydrogenivirga sp. 128-5-R1-1] gi|159883179|gb|EDP76683.1| oxaloacetate decarboxylase [Hydrogenivirga sp. 128-5-R1-1] Length = 441 Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats. Identities = 24/157 (15%), Positives = 40/157 (25%), Gaps = 26/157 (16%) Query: 14 GANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ------------FS 61 G N+ A K I + +LL V R + T D + Sbjct: 201 GQNVTAWGKDFERPIPFSELLYEVSKVDGVERIRFTTGHPKDLTDDTVEAMADIPQVCNA 260 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 P + K KEF + + ++ D+ L+ D Sbjct: 261 LHLPFQAGSDRILELMDRKYTKEFYLDRINRLKEAVEDIALSTDII-------VGFPTET 313 Query: 122 DGCFTTLVAALQRKVKKVT---IVSTVLSDPSMASDQ 155 D F + ++ V + S S Sbjct: 314 DEDFEHTLDVVRE----VEFEQVFSFKYSPRPGTPAA 346 >gi|25026602|ref|NP_736656.1| hypothetical protein CE0046 [Corynebacterium efficiens YS-314] gi|259508265|ref|ZP_05751165.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] gi|23491881|dbj|BAC16856.1| hypothetical protein [Corynebacterium efficiens YS-314] gi|259164153|gb|EEW48707.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] Length = 160 Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats. Identities = 21/117 (17%), Positives = 37/117 (31%), Gaps = 8/117 (6%) Query: 56 PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKS--SMDVELA--VDAFEQSE 111 Q +P ++ + V A ++ D+ L + A ++ Sbjct: 35 HVTQAAPHDQFTVSTSHHNYTVAAFALRDIRSVHLLPPRSGPDGADMALIDGIAASRLNK 94 Query: 112 GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 ++ + I SGD F + L T VS P S + R A + L Sbjct: 95 NVDQICIGSGDHIFAFALTRLNNLGFHTTAVS----RPEACSLHITRAASRVLYLPD 147 >gi|190015992|ref|YP_001965200.1| hypothetical protein PNSL1.097 [Rhodococcus sp. NS1] gi|114796832|gb|ABI79425.1| hypothetical protein PNSL1.097 [Rhodococcus sp. NS1] Length = 174 Score = 39.6 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 24/157 (15%), Positives = 41/157 (26%), Gaps = 24/157 (15%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 R + ID NL LG ID + + + + D Sbjct: 18 RPRTLHLIDLENL------LGGRIDPHAVATLWNHYRELTAMRW-----DDHVIVAVSRR 66 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 LD V V + + A+D + +++ +GD Sbjct: 67 HALDTFTALPATVQRVVGPNSPDGADHALLD-------AIDIDWAARRFGQVIVATGDHI 119 Query: 125 FTTLVAALQRKVKK-VTIVSTVLSDPSMASDQLRRQA 160 FT L + V ++ + L Q Sbjct: 120 FTDTARRLAATGLQLVQVLGLGY-----TATDLYHQC 151 >gi|298345622|ref|YP_003718309.1| hypothetical protein HMPREF0573_10496 [Mobiluncus curtisii ATCC 43063] gi|304390689|ref|ZP_07372642.1| conserved hypothetical protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315654221|ref|ZP_07907129.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333] gi|315657881|ref|ZP_07910761.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] gi|298235683|gb|ADI66815.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 43063] gi|304326445|gb|EFL93690.1| conserved hypothetical protein [Mobiluncus curtisii subsp. curtisii ATCC 35241] gi|315491256|gb|EFU80873.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333] gi|315491678|gb|EFU81289.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii ATCC 35242] Length = 191 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 55/154 (35%), Gaps = 21/154 (13%) Query: 10 LFIDGANLYASSK--ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 L +DG N+ A+ LG D + R R Y + + L Sbjct: 13 LLVDGENIDATLGLSVLGRRPDPDE-------RPRWDRVRDYV---SETFPGQTKGLFFL 62 Query: 68 DWLHYNGFQVVAKVAKEFTENC--GRKRVKSSMDVEL--AVDAFEQSEGLEHLVIFSGDG 123 + + V + + +R + +DV + ++A + + ++V+ S DG Sbjct: 63 NASAHMPMTFVQALLAMNYQPIPLASERDEKVVDVGIQRTLEAID-KQEYGNVVLVSHDG 121 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLR 157 F + +L R VT+V S +LR Sbjct: 122 DFEPQLRSLLRNDHDVTVVGF----EEFLSGELR 151 >gi|21325639|dbj|BAC00260.1| Hypothetical protein [Corynebacterium glutamicum ATCC 13032] Length = 235 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 35/120 (29%), Gaps = 24/120 (20%) Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG------LEHLV 117 P ++ L GF V AK K D ++ D + L ++ Sbjct: 99 RPWVEALRNVGFAVFAKP-------------KIGEDSDVDPDMIDHIRRRYEEGVLRGVI 145 Query: 118 IFSGDG-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 + S DG F + L + T++ + F+DL + Sbjct: 146 VASADGQNFRETLEELVAEGIPATVIGFHEHASWAVAHDTI----EFVDLEEIPGVFREP 201 >gi|302692524|ref|XP_003035941.1| hypothetical protein SCHCODRAFT_105543 [Schizophyllum commune H4-8] gi|300109637|gb|EFJ01039.1| hypothetical protein SCHCODRAFT_105543 [Schizophyllum commune H4-8] Length = 598 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 29/183 (15%), Positives = 52/183 (28%), Gaps = 37/183 (20%) Query: 10 LFIDG---ANLYASSKALGFDIDYRKLLKAFRSRAIVIRAY-YYTTVVGDPEQQFSPLHP 65 L +D N ++ G D + ++ ++R + Y V QQ + Sbjct: 22 LVVDALSIENCQYTAGRSG--FDIARNIEEQARGHGLLRTFNAYLDV-----QQCATPAT 74 Query: 66 LLDWLHYNGFQVVAKVAKEFTE----------------NCGRKRVKSSMDVE----LAVD 105 L L +G +V + + D L D Sbjct: 75 LRSELQSSGVTLVDCPHNGQKNVVDLMLLSALCAFAPLPHALTIILINFDSLVSLVLVAD 134 Query: 106 AFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162 + +V+ SGD F + L+++ V +V P L Q Sbjct: 135 MLVFALREPAPSTVVLVSGDRDFAYTASILRQRGINVVLVCHARPGPH---RSLAAQVSE 191 Query: 163 FMD 165 +D Sbjct: 192 CVD 194 >gi|210135304|ref|YP_002301743.1| hypothetical protein HPP12_1111 [Helicobacter pylori P12] gi|210133272|gb|ACJ08263.1| hypothetical protein HPP12_1111 [Helicobacter pylori P12] Length = 295 Score = 39.6 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 26/223 (11%), Positives = 60/223 (26%), Gaps = 68/223 (30%) Query: 3 DPREKI--ALFIDGANLYASSKALG--------FDIDYRK-------LLKAFRSRAIVIR 45 + KI +F+D NL A +A+ ++ + + R Sbjct: 32 ENMGKIETTIFVDWENLLADLRAIQETDERFKESHFNFNNPEQLLALIRSFLEPEEELKR 91 Query: 46 AYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKR------------ 93 Y+Y + + + + + K +E G + Sbjct: 92 IYFYVS--EPFTEAEPRIKGKKNEKLEEHKEKNPKDYEERVNKSGIIQSFNHNIAQQNQV 149 Query: 94 ----------------------------------VKSSMDVELAVDAFEQ--SEGLEHLV 117 + +D LA D + ++ ++ Sbjct: 150 KLRVGRVMFEFVYEFEGKEVYGLEAKIPIPQLKSRQKQVDALLAHDITKLYCTKQGGCIL 209 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160 +FS D F ++ +Q + K ++ + P L++ Sbjct: 210 LFSRDTDFVPVLEEVQDQHSK-AFIANIKKSPISVPSDLKKSC 251 >gi|66825719|ref|XP_646214.1| hypothetical protein DDB_G0269710 [Dictyostelium discoideum AX4] gi|60474268|gb|EAL72205.1| hypothetical protein DDB_G0269710 [Dictyostelium discoideum AX4] Length = 1442 Score = 39.6 bits (91), Expect = 0.18, Method: Composition-based stats. Identities = 26/177 (14%), Positives = 59/177 (33%), Gaps = 27/177 (15%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 + +F D N S G + + R ++ + + ++ S L Sbjct: 7 VNVFWDLENCAVPSNLKGIHV-VNAIRSFALQRGVLKNISAFANLKLIKDELRSNLQ--- 62 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGC 124 G + + ++ D+ + V+ + + +V+ SGD Sbjct: 63 ----ECGVLLHDV----------TRNKSNASDIAILVEILKLVIDNKPPHCIVLISGDRD 108 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD-YFMDLAYLKNEIARDPDED 180 F+ ++ L + +V ++ + ASD L+ A + ++ LK I Sbjct: 109 FSNVLNTLTFRRYQVFLI-----HSTHASDVLKYSATASYEWISLLKGTIKAPNSPP 160 >gi|19554056|ref|NP_602058.1| hypothetical protein NCgl2768 [Corynebacterium glutamicum ATCC 13032] gi|62391705|ref|YP_227107.1| hypothetical protein cg3173 [Corynebacterium glutamicum ATCC 13032] gi|145296854|ref|YP_001139675.1| hypothetical protein cgR_2754 [Corynebacterium glutamicum R] gi|41327047|emb|CAF20891.1| conserved hypothetical protein [Corynebacterium glutamicum ATCC 13032] gi|140846774|dbj|BAF55773.1| hypothetical protein [Corynebacterium glutamicum R] Length = 228 Score = 39.6 bits (91), Expect = 0.18, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 35/120 (29%), Gaps = 24/120 (20%) Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG------LEHLV 117 P ++ L GF V AK K D ++ D + L ++ Sbjct: 92 RPWVEALRNVGFAVFAKP-------------KIGEDSDVDPDMIDHIRRRYEEGVLRGVI 138 Query: 118 IFSGDG-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 + S DG F + L + T++ + F+DL + Sbjct: 139 VASADGQNFRETLEELVAEGIPATVIGFHEHASWAVAHDTI----EFVDLEEIPGVFREP 194 >gi|302808057|ref|XP_002985723.1| hypothetical protein SELMODRAFT_47664 [Selaginella moellendorffii] gi|300146632|gb|EFJ13301.1| hypothetical protein SELMODRAFT_47664 [Selaginella moellendorffii] Length = 152 Score = 39.6 bits (91), Expect = 0.18, Method: Composition-based stats. Identities = 27/164 (16%), Positives = 49/164 (29%), Gaps = 24/164 (14%) Query: 7 KIALFIDGAN--LYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 KI ++ D N + A ++ L++ + V Sbjct: 1 KIGVWWDFENCNVPYGIDAHRVGLNIVSGLRSSGFKGPVSI--------SGYGDMLQLSR 52 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSG 121 + + L G ++ G K + S D L +D + HL + SG Sbjct: 53 SVQESLSATGIRLHHVP-------SGGKESE-SSDRALLMDLILWTIENPPPAHLFLISG 104 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165 D F+T + L+ + V + + S L A Sbjct: 105 DRDFSTALHKLRMRNYNVLLAC---PAGAYISPSLLGAASRVWY 145 >gi|295093641|emb|CBK82732.1| Protein of unknown function DUF88. [Coprococcus sp. ART55/1] Length = 299 Score = 39.6 bits (91), Expect = 0.18, Method: Composition-based stats. Identities = 25/168 (14%), Positives = 53/168 (31%), Gaps = 33/168 (19%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 + AL+ID ++ A + + + ++ + + D S Sbjct: 2 RAALYIDCDSIEAKA--------VPVIYEDIIRTDKLVICKMFNSDKDDDSFMESAGRFR 53 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124 + + ++V + + V LAV+ + E + I +GD Sbjct: 54 IQDCMHGEYKVSSAM------------------VALAVEVMADAALSKPERIYIATGDSL 95 Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 L+ L+ +V + +D L A +M + L E Sbjct: 96 TVPLLNKLRLTDIEVVVAGPCDADKI-----LVNSAQRYMYIDVLAGE 138 >gi|57505164|ref|ZP_00371104.1| conserved hypothetical protein [Campylobacter coli RM2228] gi|57019057|gb|EAL55779.1| conserved hypothetical protein [Campylobacter coli RM2228] Length = 180 Score = 39.6 bits (91), Expect = 0.19, Method: Composition-based stats. Identities = 7/50 (14%), Positives = 22/50 (44%), Gaps = 2/50 (4%) Query: 92 KRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKV 139 + +D+++ +D + +E +++ + D F V +++ V Sbjct: 96 DIKQKGVDMKVGLDIATLANKHQVEKIILITSDSDFVPAVKHARKEGLIV 145 >gi|227876363|ref|ZP_03994475.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35243] gi|269975928|ref|ZP_06182932.1| conserved hypothetical protein [Mobiluncus mulieris 28-1] gi|306817255|ref|ZP_07451001.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239] gi|307700454|ref|ZP_07637493.1| conserved hypothetical protein [Mobiluncus mulieris FB024-16] gi|227842904|gb|EEJ53101.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35243] gi|269935756|gb|EEZ92286.1| conserved hypothetical protein [Mobiluncus mulieris 28-1] gi|304649935|gb|EFM47214.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239] gi|307614439|gb|EFN93669.1| conserved hypothetical protein [Mobiluncus mulieris FB024-16] Length = 191 Score = 39.6 bits (91), Expect = 0.20, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 52/164 (31%), Gaps = 18/164 (10%) Query: 10 LFIDGANLYASSK--ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 L +DG N+ A+ L D + R R Y + + L Sbjct: 13 LLVDGENIDATLGLSVLQRRPDPDE-------RPRWDRVRDYVA---ENNAGETKALFFL 62 Query: 68 DWLHYNGFQVVAKVA--KEFTENCGRKRVKSSMDVEL--AVDAFEQSEGLEHLVIFSGDG 123 + + V + + + +DV + +DA + G ++V+ S DG Sbjct: 63 NATAHMPMTFVQALLAMNYLPIPLSSEGTEQVVDVGIQRTLDAI-AARGEGNIVLVSHDG 121 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 F + L R +V +V L Q +DL Sbjct: 122 DFEPQLQTLLRNGHRVAVVGFDEFLSGEL-RSLEEQGLKIIDLE 164 >gi|227547784|ref|ZP_03977833.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM 44291] gi|227080150|gb|EEI18113.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM 44291] Length = 238 Score = 39.6 bits (91), Expect = 0.20, Method: Composition-based stats. Identities = 23/115 (20%), Positives = 41/115 (35%), Gaps = 13/115 (11%) Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 P ++ L GF V AK + + + + ++ L LV+ S DG Sbjct: 92 RPWVEALRNVGFAVFAKPKSDDDSDVDQDMLA-------HIERRRDEGVLRGLVVASADG 144 Query: 124 -CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 F + L + VT++ S++ F+DL + R+P Sbjct: 145 QNFMPAIEDLLNEGIPVTVLGFHEHASWAVSNEEID----FVDLEDIPGVF-REP 194 >gi|317178554|dbj|BAJ56342.1| hypothetical protein HPF30_0245 [Helicobacter pylori F30] Length = 213 Score = 39.6 bits (91), Expect = 0.21, Method: Composition-based stats. Identities = 21/129 (16%), Positives = 47/129 (36%), Gaps = 5/129 (3%) Query: 35 KAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRV 94 + +++ +I+A+ + + + +V AK K Sbjct: 45 EKRVNKSGIIQAFNRKIAQQNQVKLRVGRVMFEFVYEFEDKEVHNIEAKIPI--PHLKLR 102 Query: 95 KSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMA 152 + +D L D + ++ +++FS D F ++ A K +V I + P++ Sbjct: 103 QKQIDALLVHDITKLYCTKQGGCILLFSKDTDFVPVLEAAWEKDFEVFIANIQEG-PNLV 161 Query: 153 SDQLRRQAD 161 LR+ D Sbjct: 162 PPDLRKSCD 170 >gi|311742102|ref|ZP_07715912.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272] gi|311314595|gb|EFQ84502.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272] Length = 192 Score = 39.2 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 26/145 (17%), Positives = 46/145 (31%), Gaps = 21/145 (14%) Query: 10 LFIDGANLYASSKA--LGFDIDY------RKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 L +DG N+ A+ LG +LL+ + V E Sbjct: 14 LLVDGENIDATLGQSILGRRPHPTERPRWDRLLRFAEEHWDQQVKGLFFLAVTAGELP-- 71 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 + L GF+ V + +DV + E + +V+ S Sbjct: 72 --MGFVQALTAIGFRPVPL---------AGAPEQKVVDVAIQRTLEEIARREADVVLASN 120 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVL 146 DG F + AL + ++V ++ Sbjct: 121 DGDFLPQIEALVQGSRRVAMLGFEE 145 >gi|319954470|ref|YP_004165737.1| d-lactate dehydrogenase [Cellulophaga algicola DSM 14237] gi|319423130|gb|ADV50239.1| D-lactate dehydrogenase [Cellulophaga algicola DSM 14237] Length = 331 Score = 39.2 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 10/50 (20%), Positives = 20/50 (40%) Query: 89 CGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKK 138 K D L++D + ++G + + IF+ D ++ L K Sbjct: 20 NNDKHTLKMFDTYLSLDTVDLAKGYDAICIFTEDNAAAPILDRLYELGIK 69 >gi|308050612|ref|YP_003914178.1| NAD(+) kinase [Ferrimonas balearica DSM 9799] gi|307632802|gb|ADN77104.1| NAD(+) kinase [Ferrimonas balearica DSM 9799] Length = 309 Score = 39.2 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 27/90 (30%), Gaps = 9/90 (10%) Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG 112 D + L L WL G++V+ + R D VD + Sbjct: 28 KPDHDGANQTLTRLFYWLRKQGYEVLLE---------QRVAKHLGCDKAERVDLTTLGQR 78 Query: 113 LEHLVIFSGDGCFTTLVAALQRKVKKVTIV 142 + ++ GDG L R V V Sbjct: 79 CDLAIVVGGDGNMLGAARVLSRFDVAVIGV 108 >gi|119715267|ref|YP_922232.1| hypothetical protein Noca_1026 [Nocardioides sp. JS614] gi|119535928|gb|ABL80545.1| hypothetical protein Noca_1026 [Nocardioides sp. JS614] Length = 207 Score = 39.2 bits (90), Expect = 0.25, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 4/56 (7%) Query: 106 AFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 ++ + +VI SGDG F L +R+ V V+ + S L R A Sbjct: 103 LTHAADRFDRVVIASGDGMFEDLAIEARRRGLHVHQVTGL----GRCSAALSRAAT 154 >gi|302757247|ref|XP_002962047.1| hypothetical protein SELMODRAFT_227265 [Selaginella moellendorffii] gi|300170706|gb|EFJ37307.1| hypothetical protein SELMODRAFT_227265 [Selaginella moellendorffii] Length = 546 Score = 39.2 bits (90), Expect = 0.25, Method: Composition-based stats. Identities = 18/144 (12%), Positives = 43/144 (29%), Gaps = 31/144 (21%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL- 66 +A+ D N + +++ ++ V A + + FS Sbjct: 23 VAILWDIENC-----TVPGEVNPEEVA------GNVRMALRMHSSTRGAVKMFSAYGDFN 71 Query: 67 ------LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLV 117 + G ++ K++ D + VD F + ++ Sbjct: 72 HFPRKVREGCQRTGVNLIDVP----------NGRKNASDKAILVDMFLFALDNRPPCTIL 121 Query: 118 IFSGDGCFTTLVAALQRKVKKVTI 141 + +GD F + L ++ V + Sbjct: 122 LITGDVDFAPALHKLGQRDYTVVL 145 >gi|302775250|ref|XP_002971042.1| hypothetical protein SELMODRAFT_270892 [Selaginella moellendorffii] gi|300161024|gb|EFJ27640.1| hypothetical protein SELMODRAFT_270892 [Selaginella moellendorffii] Length = 550 Score = 39.2 bits (90), Expect = 0.26, Method: Composition-based stats. Identities = 18/144 (12%), Positives = 43/144 (29%), Gaps = 31/144 (21%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL- 66 +A+ D N + +++ ++ V A + + FS Sbjct: 23 VAILWDIENC-----TVPGEVNPEEVA------GNVRMALRMHSSTRGAVKMFSAYGDFN 71 Query: 67 ------LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLV 117 + G ++ K++ D + VD F + ++ Sbjct: 72 HFPRKVREGCQRTGVNLIDVP----------NGRKNASDKAILVDMFLFALDNRPPCTIL 121 Query: 118 IFSGDGCFTTLVAALQRKVKKVTI 141 + +GD F + L ++ V + Sbjct: 122 LITGDVDFAPALHKLGQRDYTVVL 145 >gi|302692512|ref|XP_003035935.1| hypothetical protein SCHCODRAFT_105536 [Schizophyllum commune H4-8] gi|300109631|gb|EFJ01033.1| hypothetical protein SCHCODRAFT_105536 [Schizophyllum commune H4-8] Length = 701 Score = 39.2 bits (90), Expect = 0.27, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 50/151 (33%), Gaps = 20/151 (13%) Query: 15 ANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNG 74 N + + GFDI + + + V Y Q + + L L +G Sbjct: 7 ENCHFTGGCSGFDI-AKNIERVALPHGSVTAFNAYLD-----PQLCTISNNLRSELQSSG 60 Query: 75 FQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAA 131 ++ K+++D L D + LV+ SGD F A Sbjct: 61 VALIDCP---------HNGQKNAVDQMLQTDILLFALDNPAPATLVLISGDRDFAYTAAV 111 Query: 132 LQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162 L+R+ V ++ P + L + A + Sbjct: 112 LRRRHYNVILICRSQPGPHRS--LLSQVASH 140 >gi|319948099|ref|ZP_08022264.1| hypothetical protein ES5_02124 [Dietzia cinnamea P4] gi|319438233|gb|EFV93188.1| hypothetical protein ES5_02124 [Dietzia cinnamea P4] Length = 177 Score = 38.8 bits (89), Expect = 0.28, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 7/62 (11%) Query: 104 VDAFEQ---SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160 +D ++ + +V+ SGDG FT VA L KVT+V+ + + +L+ A Sbjct: 105 LDVLNYENIADRFDEVVLVSGDGIFTETVATLGGHGVKVTVVA----HRTSLAKRLQMAA 160 Query: 161 DY 162 Sbjct: 161 SQ 162 >gi|332994847|gb|AEF04902.1| hypothetical protein ambt_16985 [Alteromonas sp. SN2] Length = 273 Score = 38.8 bits (89), Expect = 0.28, Method: Composition-based stats. Identities = 10/113 (8%), Positives = 29/113 (25%), Gaps = 10/113 (8%) Query: 31 RKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCG 90 ++L + + + + +L V E+ Sbjct: 123 QELHSSLKKSRKLALRMGKLSKAKRWIMDERAQKSILTGEKDINELV--------PEDFY 174 Query: 91 RKRVKSSMDVELAVDA--FEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTI 141 + +D + +D + + +V+ + D F + V + Sbjct: 175 LDVKQKGVDTRIGIDITTVTLRKFADTIVLIASDADFVPAAKLARTHGVDVVL 227 >gi|172355523|ref|NP_001116497.1| intraflagellar transport 140 homolog [Xenopus (Silurana) tropicalis] gi|160774080|gb|AAI55382.1| ift140 protein [Xenopus (Silurana) tropicalis] Length = 1461 Score = 38.8 bits (89), Expect = 0.29, Method: Composition-based stats. Identities = 17/108 (15%), Positives = 31/108 (28%), Gaps = 7/108 (6%) Query: 15 ANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNG 74 +NL A+ K DY L++ + RA G+ + Sbjct: 969 SNLDAALKYYEMAQDYLSLVRVHCFLGNIQRAAEIANETGNGAASYHLARHYESQEEVKQ 1028 Query: 75 FQVVAKVAKEFTENCGRKRVKSSMD--VELAV-----DAFEQSEGLEH 115 A+ + + + D + LA+ D E + E Sbjct: 1029 AVHFYTRAQAYNNGIRLCKENNMDDQLMNLALLSSPEDMMEAARYYEE 1076 >gi|229819338|ref|YP_002880864.1| hypothetical protein Bcav_0841 [Beutenbergia cavernae DSM 12333] gi|229565251|gb|ACQ79102.1| conserved hypothetical protein [Beutenbergia cavernae DSM 12333] Length = 197 Score = 38.8 bits (89), Expect = 0.29, Method: Composition-based stats. Identities = 23/169 (13%), Positives = 48/169 (28%), Gaps = 30/169 (17%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGD-------PEQQ 59 + + +DG N+ A+ LG + + R R I A+ T Sbjct: 16 RTYVLVDGENIDAT---LGMSVLGHRPAPEERPRWDRITAFAETLWDQPVTALFFLNASN 72 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119 + L G+ + + +D+ + ++ +++ Sbjct: 73 GQMPMSFVQALLALGYHPIPL---------AGGPGEKVVDIGIQRTLAALTDRPSDVLLA 123 Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 S DG F V L +V ++ + F +L Sbjct: 124 SHDGDFLPQVEDLLTPDHRVGLLCF---------REFANA--RFTELTE 161 >gi|315446769|ref|YP_004079648.1| hypothetical protein Mspyr1_52890 [Mycobacterium sp. Spyr1] gi|315265072|gb|ADU01814.1| Protein of unknown function DUF88 [Mycobacterium sp. Spyr1] Length = 171 Score = 38.8 bits (89), Expect = 0.30, Method: Composition-based stats. Identities = 27/144 (18%), Positives = 50/144 (34%), Gaps = 24/144 (16%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 ++ + +D N+ A+ + + K V+ GD Sbjct: 17 KRRIVLVDIENVVGGLSAVRDHVSWAK----------VVIGECVPAQPGDQVVIGVGPTG 66 Query: 66 LLD-WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELA-VDAFEQSEGLEHLVIFSGDG 123 LLD + + V + + + D+ L V ++ +V+ SGDG Sbjct: 67 LLDLACAWKSVRYVMRPGQ------------NGADLALLEVLGENIADRFTEVVLVSGDG 114 Query: 124 CFTTLVAALQRKVKKVTIVSTVLS 147 FT +AAL + K T+V+ Sbjct: 115 IFTHAIAALASRGVKTTVVAHASG 138 >gi|296131338|ref|YP_003638588.1| hypothetical protein Cfla_3517 [Cellulomonas flavigena DSM 20109] gi|296023153|gb|ADG76389.1| conserved hypothetical protein [Cellulomonas flavigena DSM 20109] Length = 163 Score = 38.8 bits (89), Expect = 0.31, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 25/71 (35%), Gaps = 6/71 (8%) Query: 92 KRVKSSMDVELA--VDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDP 149 + DV L VD LV+ SGD F LV ++R + V + Sbjct: 79 RSGAGGADVALVDDVDLGHLVARFTWLVVASGDHAFVPLVETVRRAGVRTWQV----TGA 134 Query: 150 SMASDQLRRQA 160 + L R A Sbjct: 135 GRPAHALLRTA 145 >gi|320166337|gb|EFW43236.1| predicted protein [Capsaspora owczarzaki ATCC 30864] Length = 428 Score = 38.8 bits (89), Expect = 0.32, Method: Composition-based stats. Identities = 24/153 (15%), Positives = 48/153 (31%), Gaps = 9/153 (5%) Query: 30 YRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKE-FTEN 88 + LL+ F + Y++T+ L + + +K Sbjct: 22 FVNLLEHFCGSR-FVEVYFFTSAPDTVGPAPLHARLRLAQIKPCISPLKSKNVTCTHCNA 80 Query: 89 CGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVL 146 V++ +DV LA L L + +GDG F ++ + + + Sbjct: 81 HFSTVVQAGVDVALATKVLTLVGEKALTGLFLLTGDGDFKEMLHYVTD--VRHIPMWLA- 137 Query: 147 SDPSMASDQLRRQADY--FMDLAYLKNEIARDP 177 S L+ A+ + L + + I P Sbjct: 138 GFQKCTSTLLQAYANRGAILWLDEIWDAITYQP 170 >gi|281415100|ref|ZP_06246842.1| hypothetical protein MlutN2_07862 [Micrococcus luteus NCTC 2665] Length = 162 Score = 38.8 bits (89), Expect = 0.32, Method: Composition-based stats. Identities = 8/53 (15%), Positives = 21/53 (39%), Gaps = 2/53 (3%) Query: 86 TENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKV 136 ++ + +D+ + +D + E + +++ SGD F +R Sbjct: 50 ADDFLLDITQKGVDMRVGLDIAALAATEPVNQIIMISGDSDFVPAGKHARRSG 102 >gi|320532285|ref|ZP_08033142.1| hypothetical protein HMPREF9057_01013 [Actinomyces sp. oral taxon 171 str. F0337] gi|320135502|gb|EFW27593.1| hypothetical protein HMPREF9057_01013 [Actinomyces sp. oral taxon 171 str. F0337] Length = 234 Score = 38.8 bits (89), Expect = 0.34, Method: Composition-based stats. Identities = 22/159 (13%), Positives = 44/159 (27%), Gaps = 34/159 (21%) Query: 10 LFIDGANLYASSK-----------------ALGFDIDYRKLLKAFRSRAIVIRAYYYTTV 52 L +DG N+ A+ + D A RA ++ Sbjct: 41 LLVDGENIDATLGMSVLGRRPEPEERPRWDRVLAYCDELSSADATEGEGDEARALFFLNA 100 Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG 112 + L ++ V + +D+ + +E Sbjct: 101 TSGHMP-----MSFIQALLAMDYRPVPL-------AGSGSNEEKVVDIGIQRTLEALAER 148 Query: 113 LE-----HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVL 146 +E H+++ S DG + + L + KV I+ Sbjct: 149 VESGQEAHVLLGSHDGDYIPHIERLLQAGAKVGILCFRE 187 >gi|238926766|ref|ZP_04658526.1| hypothetical protein HMPREF0908_0666 [Selenomonas flueggei ATCC 43531] gi|238885298|gb|EEQ48936.1| hypothetical protein HMPREF0908_0666 [Selenomonas flueggei ATCC 43531] Length = 293 Score = 38.8 bits (89), Expect = 0.34, Method: Composition-based stats. Identities = 24/167 (14%), Positives = 44/167 (26%), Gaps = 30/167 (17%) Query: 1 MFDPR-EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59 M D + +A+ D N + A Y Sbjct: 1 MLDSSSDTVAILYDIENAPIEMLQY-----------------TIDIAQRYQPCRMIVVSD 43 Query: 60 FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG-LEHLVI 118 + W ++ F + K+S+D L A + + I Sbjct: 44 WEAHPDQKRWDR-----LMESPDFTFRQISRTFLGKNSLDSALYDSAQILYQEGVRKYFI 98 Query: 119 FSGDGCFTTLVAALQRKV-KKVTIVSTVLSDPSMASDQLRRQADYFM 164 + D F + +L + + + T AS+ LR + F Sbjct: 99 ITTDSDFVRIAESLNSEDPSYIIGIGTKQ-----ASEDLRNAYNEFF 140 >gi|15645947|ref|NP_208126.1| hypothetical protein HP1334 [Helicobacter pylori 26695] gi|2314514|gb|AAD08389.1| predicted coding region HP1334 [Helicobacter pylori 26695] Length = 224 Score = 38.8 bits (89), Expect = 0.34, Method: Composition-based stats. Identities = 22/189 (11%), Positives = 55/189 (29%), Gaps = 58/189 (30%) Query: 6 EKIALFIDGANL---YAS-SKALGFDIDYRKLLKAFRSRA----------IVIRAYYYTT 51 +K+A+ +DG Y S K D++ +KL + + R ++Y Sbjct: 3 KKVAILVDGDFFIRCYKSHLKKQPEDLNPKKLAHHIHTYCLKHINKKNDEELYRIFFYDC 62 Query: 52 VVGDPEQQFSPLHPLLDWLHYNGFQ--------VVAKVAK-------------------- 83 + + LD ++ +++K Sbjct: 63 KPLKKKAHYPYTQKALDLSKSPTYREREELHEHLISKPCLALRLGYLDEKNARWVIRDQE 122 Query: 84 --------------EFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTT 127 ++ + +D+++ +D + ++ +V+ SGD F Sbjct: 123 KEKKLFNRRISIEEFQNDDFIYHAKQKGVDIKIGLDIATLALKKLVQKIVLISGDSDFVP 182 Query: 128 LVAALQRKV 136 + + Sbjct: 183 ASKLARVEG 191 >gi|271965410|ref|YP_003339606.1| hypothetical protein Sros_3953 [Streptosporangium roseum DSM 43021] gi|270508585|gb|ACZ86863.1| hypothetical protein Sros_3953 [Streptosporangium roseum DSM 43021] Length = 148 Score = 38.8 bits (89), Expect = 0.36, Method: Composition-based stats. Identities = 29/157 (18%), Positives = 48/157 (30%), Gaps = 23/157 (14%) Query: 11 FIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWL 70 +D NL +++ D+ + A Y+ V Q+ L Sbjct: 12 LLDVENLVGNARPATRDV-------------RTMMARYHERVPTGGMDQYVAAVN-HGAL 57 Query: 71 HYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVA 130 G + + G + ++ E +VI SGDG F Sbjct: 58 VPVGLALAGIQLLVRSGPDGADGALGE-----VIRLDHLADRFERVVIGSGDGIFADFAG 112 Query: 131 ALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167 L + V +VS P + +LRR A + L Sbjct: 113 WLSGRGVLVVVVS----RPESLNRRLRRTAAQVISLD 145 >gi|227489162|ref|ZP_03919478.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227540727|ref|ZP_03970776.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51866] gi|227090868|gb|EEI26180.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227183484|gb|EEI64456.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51866] Length = 225 Score = 38.8 bits (89), Expect = 0.36, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 60/188 (31%), Gaps = 41/188 (21%) Query: 10 LFIDGANLYASSKAL-------GFDIDYRKLLKAFRSRAIVI------RAYYYTTVVGDP 56 L D N+ ++ + + + + RA + A +T V Sbjct: 23 LVWDAPNVDMGLGSILGGRPTSAYRPRFDAIGRWLLKRAEQLGEDIEPEATVFTNVAPGG 82 Query: 57 EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG---- 112 + + ++ L GF V AK KS D ++ D Sbjct: 83 AE---VMRSWVEALRNVGFAVFAKP-------------KSEEDSDVDPDMLAHIRRRHTE 126 Query: 113 --LEHLVIFSGDG-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 L +V+ S DG F L+ L + T++ AS + + F+DL + Sbjct: 127 GVLRGVVVASADGQNFRELLLELADEGIPATVIGFH----EHASWAVTAENIEFVDLEEI 182 Query: 170 KNEIARDP 177 R+P Sbjct: 183 PGVF-REP 189 >gi|317012923|gb|ADU83531.1| hypothetical protein HPLT_05705 [Helicobacter pylori Lithuania75] Length = 255 Score = 38.5 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 31/70 (44%), Gaps = 3/70 (4%) Query: 94 VKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151 + +D LA D + ++ +++FS D F ++ A K +V ++ + P++ Sbjct: 142 RQKQIDALLAHDITKLYCTKQGGCILLFSKDTDFVPVLEAAWEKGFEV-FIAKIEESPNL 200 Query: 152 ASDQLRRQAD 161 L+ D Sbjct: 201 VPPDLKDPCD 210 >gi|259047876|ref|ZP_05738277.1| conserved hypothetical protein [Granulicatella adiacens ATCC 49175] gi|259035553|gb|EEW36808.1| conserved hypothetical protein [Granulicatella adiacens ATCC 49175] Length = 224 Score = 38.5 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 7/45 (15%), Positives = 22/45 (48%), Gaps = 2/45 (4%) Query: 94 VKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKV 136 + +D+ + +D + + + +E +++ +GD F +R+ Sbjct: 145 EQKGVDMRIGLDIAQLAFKKQVEKIILIAGDSDFVPAAKLARREG 189 >gi|307204444|gb|EFN83151.1| Limkain-b1 [Harpegnathos saltator] Length = 1652 Score = 38.5 bits (88), Expect = 0.37, Method: Composition-based stats. Identities = 27/173 (15%), Positives = 59/173 (34%), Gaps = 20/173 (11%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 I +F D N + + + F S R + V ++ + + L Sbjct: 100 IGVFWDIENCQVPKGRSAIAVT-QVIRDKFFSGY---REAEFIVVCDVQKENYQIIQELN 155 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTT 127 D K + ++ ++ D+ + A +++ SGD F Sbjct: 156 DAQVNLIHVSATC--KNAADEKLKQSIRRFADIHGSPAA---------IILISGDINFAA 204 Query: 128 LVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI-ARDPDE 179 ++ L+ + K++ ++ L S+ L A+ D L + +R P + Sbjct: 205 DLSDLRHR-KRIHVI---LLHKKNTSEALILCANEHYDFTELMEPLPSRTPAK 253 >gi|226941993|ref|YP_002797067.1| Gp9, Cpp15 [Laribacter hongkongensis HLHK9] gi|226716920|gb|ACO76058.1| Gp9, Cpp15 [Laribacter hongkongensis HLHK9] Length = 227 Score = 38.5 bits (88), Expect = 0.37, Method: Composition-based stats. Identities = 16/149 (10%), Positives = 44/149 (29%), Gaps = 20/149 (13%) Query: 33 LLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRK 92 L +A + ++ + +L ++ Sbjct: 90 LHEALSRKRKLVLRRGQLADFNQWNIKPMVQRQILKGERSVDDL--------RDDDFIYD 141 Query: 93 RVKSSMDVELAVDA--FEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS 150 ++ +D +A+D + + +V+F+ D F L ++ + + + Sbjct: 142 VRQNGIDTLMALDVAGIVYKKLADQVVLFAADADFVPLAQLVRPEGIDLVL----DPMWK 197 Query: 151 MASDQLRRQADYFMDLAYLKNEIARDPDE 179 + +L F + L++ R E Sbjct: 198 PVAPEL------FNHIDGLRSTCPRPVRE 220 >gi|298735852|ref|YP_003728377.1| hypothetical protein HPB8_356 [Helicobacter pylori B8] gi|298355041|emb|CBI65913.1| hypothetical protein HPB8_356 [Helicobacter pylori B8] Length = 148 Score = 38.5 bits (88), Expect = 0.40, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 30/69 (43%), Gaps = 3/69 (4%) Query: 94 VKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151 + +D LA D + ++ +++FS D F ++ A K +V I + P++ Sbjct: 37 RQKQIDALLAHDITKLYCTKQGGCILLFSKDTDFVPVLEAAWEKGFEVFIANIQEG-PNL 95 Query: 152 ASDQLRRQA 160 L++ Sbjct: 96 VPPDLKKSC 104 >gi|302883636|ref|XP_003040717.1| hypothetical protein NECHADRAFT_67900 [Nectria haematococca mpVI 77-13-4] gi|256721607|gb|EEU35004.1| hypothetical protein NECHADRAFT_67900 [Nectria haematococca mpVI 77-13-4] Length = 434 Score = 38.5 bits (88), Expect = 0.41, Method: Composition-based stats. Identities = 29/194 (14%), Positives = 61/194 (31%), Gaps = 28/194 (14%) Query: 8 IALFIDGANLYAS-SKALGFDIDYRKLLKA-------FRSRAIVIRAYYYTTVV--GDPE 57 I +FID +N+ KAL + ++ ++ + + G Sbjct: 238 IHVFIDMSNIIIGFQKALRARYSLPESVRFIPLPQMNLEFFHKLLVRDRHAEWLNVGCSM 297 Query: 58 QQFSPLHPLLDWLHYNGFQV---VAKVAKEFTENCGRKRVKSSMD----VELAVDAFEQS 110 ++ L G++V + E G + V+ +D + + + Sbjct: 298 HPDKQKPHFIEELEDLGYRVDLRSRRPQNMAMEGHGSRYVEDMVDETLQIRIGESVMQYF 357 Query: 111 EGLEHLVIFSGD------GC-FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRR--QAD 161 + LV+ +GD F + V +VS S S + + Sbjct: 358 DKPGTLVLATGDARPAKYSDGFLAYAQRALKMGWNVEVVSWRSSLSSAWNGVWKEEGVGS 417 Query: 162 YF--MDLAYLKNEI 173 F ++L +E+ Sbjct: 418 RFRVIELDQFLDEL 431 >gi|297836172|ref|XP_002885968.1| hypothetical protein ARALYDRAFT_480415 [Arabidopsis lyrata subsp. lyrata] gi|297331808|gb|EFH62227.1| hypothetical protein ARALYDRAFT_480415 [Arabidopsis lyrata subsp. lyrata] Length = 451 Score = 38.5 bits (88), Expect = 0.42, Method: Composition-based stats. Identities = 19/138 (13%), Positives = 41/138 (29%), Gaps = 19/138 (13%) Query: 9 ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL-HPLL 67 A+ D N + D+ + R + V F+ + Sbjct: 15 AILWDMENCP-----VPSDVRPEDVASNIRMAIQLHPVISGPVVNFSAYGDFNAFPRRVR 69 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGC 124 + G +++ K + D + +D F + +++ SGD Sbjct: 70 EGCQRTGVRLIDVP----------NGRKDASDKAILIDMFLFVLDNKPPATIILVSGDVD 119 Query: 125 FTTLVAALQRKVKKVTIV 142 F + L ++ V +V Sbjct: 120 FAPALHILGQRGYTVILV 137 >gi|208435230|ref|YP_002266896.1| hypothetical protein HPG27_1282 [Helicobacter pylori G27] gi|208433159|gb|ACI28030.1| hypothetical protein HPG27_1282 [Helicobacter pylori G27] Length = 220 Score = 38.5 bits (88), Expect = 0.44, Method: Composition-based stats. Identities = 10/108 (9%), Positives = 31/108 (28%), Gaps = 8/108 (7%) Query: 31 RKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCG 90 +L + S+ + Y + + ++ Sbjct: 86 EELHEHLISKPCLALRLGYLDEKNARWVIRDQEKEKKLFNRRISIEEFQN------DDFI 139 Query: 91 RKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136 + +D+++ +D + ++ +V+ SGD F + + Sbjct: 140 YHAKQKGVDIKIGLDIATLALKKLVQKIVLISGDSDFVPASKLARVEG 187 >gi|320592592|gb|EFX05022.1| hypothetical protein CMQ_5284 [Grosmannia clavigera kw1407] Length = 457 Score = 38.5 bits (88), Expect = 0.45, Method: Composition-based stats. Identities = 20/176 (11%), Positives = 49/176 (27%), Gaps = 49/176 (27%) Query: 6 EKIALFIDGANLYA------------------SSKALGFDIDYRKLLKAFRSRAIVIRAY 47 E F+D +N++ S + ID KL++ + +Y Sbjct: 7 ETCMFFVDDSNIWIEAQKFAAVRDNHVPGLSDSDRDPRLRIDVGKLIRVILNGRSQGPSY 66 Query: 48 YYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAF 107 Y + + ++ + K + + G+ + +D ++VD Sbjct: 67 LYGSRPPPNDSVWNVFKKSQF------------LTKIYDRSNGK---EKEVDTAMSVDMS 111 Query: 108 EQSEGLE----------------HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLS 147 ++ + + +GD V + V + + Sbjct: 112 SEATEISVMAKFDCISRSKKAQTTFIAITGDRDMIPPVKKVLAYNIHVELWAWSSG 167 >gi|109900172|ref|YP_663427.1| arginine decarboxylase [Pseudoalteromonas atlantica T6c] gi|109702453|gb|ABG42373.1| arginine decarboxylase [Pseudoalteromonas atlantica T6c] Length = 642 Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats. Identities = 20/153 (13%), Positives = 48/153 (31%), Gaps = 20/153 (13%) Query: 23 ALGFDIDYRKLLKAFRSRAI--VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAK 80 ID++ +++ + I + ++ + ++ Y G + Sbjct: 44 NKNMRIDFQSVIEEIKEEGIQFPVVVRFHDILRSQVACLNQTFINTIEEAQYQGKYMGVY 103 Query: 81 VAKEF-----------TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG--DGCFTT 127 K +++ EL + + ++ L I +G D F Sbjct: 104 PVKVNQMREVVEEIVDAGAPFNYGLEAGSKAEL-ITVMAYNTNIDSLTILNGYKDAEFMR 162 Query: 128 LVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160 L ++ +K+ +V S+ S+ L A Sbjct: 163 LALLGRKLGRKMIVVIEKYSELSL----LVNAA 191 >gi|326431690|gb|EGD77260.1| hypothetical protein PTSG_08354 [Salpingoeca sp. ATCC 50818] Length = 631 Score = 38.1 bits (87), Expect = 0.48, Method: Composition-based stats. Identities = 28/180 (15%), Positives = 52/180 (28%), Gaps = 34/180 (18%) Query: 10 LFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDW 69 +F+D +N++ ++ D + RS +I +W Sbjct: 304 VFVDNSNVFIGAQLESSVRDL-AVRVNIRSLCGIIEDNMPCAFRAVAGTNPHSGRIWHEW 362 Query: 70 LHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLEHLVIFSGDGC-- 124 + + R +SM +A E + + LV+ +GDG Sbjct: 363 ENNH-------------YCTLLDRSDASMHNVIAAKIVEVANSGANPQTLVLVTGDGNEV 409 Query: 125 -----FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF------MDLAYLKNEI 173 F L + +V + S S S + R + F L + I Sbjct: 410 EGNESFPRLAERAIQHGWRVRVWSWEQSL----SGKFRDLKERFRANITIHFLDPFRERI 465 >gi|255578428|ref|XP_002530079.1| conserved hypothetical protein [Ricinus communis] gi|223530432|gb|EEF32319.1| conserved hypothetical protein [Ricinus communis] Length = 952 Score = 38.1 bits (87), Expect = 0.48, Method: Composition-based stats. Identities = 27/154 (17%), Positives = 46/154 (29%), Gaps = 23/154 (14%) Query: 7 KIALFIDGAN--LYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 K++++ D N L L+A + V + F Sbjct: 58 KVSVWWDFENCNLPTGVNVFKVAHAITAALRANGIKGPVQITAF--------GDVFQLSR 109 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAF---EQSEGLEHLVIFSG 121 + L G + K+S D L VD Q+ HL + SG Sbjct: 110 ANQEALSSTGINLAHVP----------HGGKNSADRSLLVDLMYWVSQNPPPAHLFLISG 159 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQ 155 D F +++ L+ V + S + + S Sbjct: 160 DRDFASILHRLRMINYNVLLASNDTAPSVLCSAA 193 >gi|226357736|ref|YP_002787476.1| tricarballylate dehydrogenase [Deinococcus deserti VCD115] gi|226319979|gb|ACO47972.1| putative FAD binding protein, putative fumarate reductase flavoprotein subunit [Deinococcus deserti VCD115] Length = 509 Score = 38.1 bits (87), Expect = 0.52, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 33/85 (38%), Gaps = 3/85 (3%) Query: 100 VELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQ 159 + L D+ + +V+ +G+ ++ + + +V ++ + Sbjct: 1 MHLNSDSPSDQHTFDTVVVGAGNAALCAALS-ARERGMRVLVLERGPHGKRGGNSYFTDG 59 Query: 160 ADYFM--DLAYLKNEIARDPDEDKK 182 A F DL +++ I R DE+ + Sbjct: 60 AIRFAYNDLNDIRDVIPRISDEEAE 84 >gi|4335722|gb|AAD17400.1| unknown protein [Arabidopsis thaliana] Length = 524 Score = 38.1 bits (87), Expect = 0.52, Method: Composition-based stats. Identities = 20/145 (13%), Positives = 41/145 (28%), Gaps = 33/145 (22%) Query: 9 ALFIDGANLYAS--------SKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60 A+ D N + + I ++ V+ Y G Sbjct: 15 AILWDMENCPVPSDVRPEDVASNIRMAIQLHPVIS-----GPVVNFSAYGDFNG------ 63 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLV 117 + + G +++ K + D + +D F + +V Sbjct: 64 -FPRRVREGCQRTGVKLIDVP----------NGRKDASDKAILIDMFLFVLDNKPPATIV 112 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIV 142 + SGD F + L ++ V +V Sbjct: 113 LVSGDVDFAPALHILGQRGYTVILV 137 >gi|330981754|gb|EGH79857.1| hypothetical protein PSYAP_24836 [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 63 Score = 38.1 bits (87), Expect = 0.54, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 21/62 (33%), Gaps = 10/62 (16%) Query: 1 MFDPREK--IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58 M + + +A+FID N A SK LG +L S V Y Sbjct: 1 MSNQLQNLNVAMFIDADN--APSKKLG------SVLAELASYGAVSIRRAYGNWKSPSLD 52 Query: 59 QF 60 + Sbjct: 53 PW 54 >gi|300780304|ref|ZP_07090160.1| conserved hypothetical protein [Corynebacterium genitalium ATCC 33030] gi|300534414|gb|EFK55473.1| conserved hypothetical protein [Corynebacterium genitalium ATCC 33030] Length = 223 Score = 38.1 bits (87), Expect = 0.54, Method: Composition-based stats. Identities = 28/121 (23%), Positives = 44/121 (36%), Gaps = 25/121 (20%) Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG------LEHLV 117 P ++ L GF V AK K+ D ++ + E E L+ +V Sbjct: 92 RPWVEALRNVGFAVFAKP-------------KADDDSDVDGEMIEHIERRRAEGVLQGVV 138 Query: 118 IFSGDG-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 + S DG F L+ L T++ AS + A F+DL + R+ Sbjct: 139 VASADGQNFHELLDELSADGLPATVLGFH----EHASWAVTSPAITFVDLEDIPGVF-RE 193 Query: 177 P 177 P Sbjct: 194 P 194 >gi|315930785|gb|EFV09786.1| Putative uncharacterized protein [Campylobacter jejuni subsp. jejuni 305] Length = 226 Score = 38.1 bits (87), Expect = 0.55, Method: Composition-based stats. Identities = 7/48 (14%), Positives = 20/48 (41%), Gaps = 2/48 (4%) Query: 91 RKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136 + +D+++ +D + ++ +V+ SGD F + + Sbjct: 147 YYAKQKGVDMKIGIDIATLALKKLVQKIVLISGDSDFVPASKLARTEG 194 >gi|154315023|ref|XP_001556835.1| hypothetical protein BC1G_04853 [Botryotinia fuckeliana B05.10] gi|150848391|gb|EDN23584.1| hypothetical protein BC1G_04853 [Botryotinia fuckeliana B05.10] Length = 270 Score = 38.1 bits (87), Expect = 0.55, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 21/56 (37%), Gaps = 8/56 (14%) Query: 106 AFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQ 159 A + + LV+ S D F LV L RK + +V + S L R Sbjct: 141 AMRHRKETLYDWLVLISDDTDFGDLVKRLSRKGVRTIVVGSKP------SRNLVRA 190 >gi|77463789|ref|YP_353293.1| hypothetical protein RSP_6103 [Rhodobacter sphaeroides 2.4.1] gi|77388207|gb|ABA79392.1| hypothetical protein RSP_6103 [Rhodobacter sphaeroides 2.4.1] Length = 161 Score = 38.1 bits (87), Expect = 0.55, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 28/87 (32%), Gaps = 1/87 (1%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 +I L +D NL S++ L +D+ L AF + + D +H + Sbjct: 39 RILLLVDAENLVLSARDLDVALDFEALRAAFARYDR-RQVECHAVYSQDIGDGPLAVHLV 97 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKR 93 H + ++ + Sbjct: 98 RRGWHPTPRPPIQRLPADRGHRNADNW 124 >gi|307638007|gb|ADN80457.1| hypothetical protein hp908_1336 [Helicobacter pylori 908] Length = 123 Score = 38.1 bits (87), Expect = 0.58, Method: Composition-based stats. Identities = 9/82 (10%), Positives = 29/82 (35%), Gaps = 2/82 (2%) Query: 57 EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LE 114 +++ + F + K ++ + +D+++ +D + ++ Sbjct: 9 DEKNARWVIRDQEKEKKLFNRRISIEKFQNDDFIYHAKQKGVDIKIGLDIATLALKKLVQ 68 Query: 115 HLVIFSGDGCFTTLVAALQRKV 136 +V+ SGD F + + Sbjct: 69 KIVLISGDSDFVPASKLARVEG 90 >gi|30679459|ref|NP_179158.2| unknown protein [Arabidopsis thaliana] gi|34365745|gb|AAQ65184.1| At2g15560 [Arabidopsis thaliana] gi|51968780|dbj|BAD43082.1| unknown protein [Arabidopsis thaliana] gi|51970842|dbj|BAD44113.1| unknown protein [Arabidopsis thaliana] gi|110738852|dbj|BAF01349.1| hypothetical protein [Arabidopsis thaliana] gi|330251322|gb|AEC06416.1| Putative endonuclease or glycosyl hydrolase [Arabidopsis thaliana] Length = 489 Score = 38.1 bits (87), Expect = 0.58, Method: Composition-based stats. Identities = 20/140 (14%), Positives = 43/140 (30%), Gaps = 23/140 (16%) Query: 9 ALFIDGAN--LYASSKALGFDIDYRKLLK-AFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 A+ D N + + + + R ++ V+ Y G Sbjct: 51 AILWDMENCPVPSDVRPEDVASNIRMAIQLHPVISGPVVNFSAYGDFNG-------FPRR 103 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGD 122 + + G +++ K + D + +D F + +V+ SGD Sbjct: 104 VREGCQRTGVKLIDVP----------NGRKDASDKAILIDMFLFVLDNKPPATIVLVSGD 153 Query: 123 GCFTTLVAALQRKVKKVTIV 142 F + L ++ V +V Sbjct: 154 VDFAPALHILGQRGYTVILV 173 >gi|317180877|dbj|BAJ58663.1| hypothetical protein HPF32_1081 [Helicobacter pylori F32] Length = 265 Score = 37.7 bits (86), Expect = 0.64, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 3/75 (4%) Query: 89 CGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVL 146 K + +D LA D + ++ +++FS D F ++ A K +V I + Sbjct: 148 PHLKLRQKQIDALLAHDITKLYCTKQGGCILLFSKDTDFVPVLEAAWEKDFEVFIANIQE 207 Query: 147 SDPSMASDQLRRQAD 161 ++ LR+ D Sbjct: 208 GL-NLVPPDLRKSCD 221 >gi|262379821|ref|ZP_06072977.1| FAD/FMN-binding/pyridine nucleotide-disulphide oxidoreductase [Acinetobacter radioresistens SH164] gi|262299278|gb|EEY87191.1| FAD/FMN-binding/pyridine nucleotide-disulphide oxidoreductase [Acinetobacter radioresistens SH164] Length = 674 Score = 37.7 bits (86), Expect = 0.65, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 36/91 (39%), Gaps = 4/91 (4%) Query: 69 WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTL 128 W+H G + K + + K + + VD ++++VI +G +T + Sbjct: 580 WIHRTG--LKHKHVQMMSGVNYEKIDDQGL--HITVDGKPMLLEVDNVVICAGQESYTAM 635 Query: 129 VAALQRKVKKVTIVSTVLSDPSMASDQLRRQ 159 LQ K+V ++ + + + RQ Sbjct: 636 FEQLQADGKRVHLIGGAREAGELDAKRAIRQ 666 >gi|255318128|ref|ZP_05359372.1| FAD/FMN-binding/pyridine nucleotide-disulphide oxidoreductase family protein [Acinetobacter radioresistens SK82] gi|255304839|gb|EET84012.1| FAD/FMN-binding/pyridine nucleotide-disulphide oxidoreductase family protein [Acinetobacter radioresistens SK82] Length = 687 Score = 37.7 bits (86), Expect = 0.65, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 36/91 (39%), Gaps = 4/91 (4%) Query: 69 WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTL 128 W+H G + K + + K + + VD ++++VI +G +T + Sbjct: 593 WIHRTG--LKHKHVQMMSGVNYEKIDDQGL--HITVDGKPMLLEVDNVVICAGQESYTAM 648 Query: 129 VAALQRKVKKVTIVSTVLSDPSMASDQLRRQ 159 LQ K+V ++ + + + RQ Sbjct: 649 FEQLQADGKRVHLIGGAREAGELDAKRAIRQ 679 >gi|317178375|dbj|BAJ56163.1| hypothetical protein HPF30_0066 [Helicobacter pylori F30] Length = 230 Score = 37.7 bits (86), Expect = 0.66, Method: Composition-based stats. Identities = 7/53 (13%), Positives = 22/53 (41%), Gaps = 2/53 (3%) Query: 86 TENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136 ++ + +D+++ +D + ++ +V+ SGD F + + Sbjct: 143 NDDFIYHAKQKGVDIKIGLDIATLALKKLVQKIVLISGDSDFVPAAKLARVEG 195 >gi|317177894|dbj|BAJ55683.1| hypothetical protein HPF16_1086 [Helicobacter pylori F16] Length = 221 Score = 37.7 bits (86), Expect = 0.67, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 3/75 (4%) Query: 89 CGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVL 146 K + +D LA D + ++ +++FS D F ++ A K +V ++ + Sbjct: 104 PHLKLRQKQIDALLAHDITKPYCTKQGGCILLFSKDTNFVPVLEAAWEKGFEV-FIANIQ 162 Query: 147 SDPSMASDQLRRQAD 161 DP++ LR+ D Sbjct: 163 KDPNLVPPDLRKSCD 177 >gi|85714185|ref|ZP_01045174.1| tRNA-i(6)A37 modification enzyme MiaB [Nitrobacter sp. Nb-311A] gi|85699311|gb|EAQ37179.1| tRNA-i(6)A37 modification enzyme MiaB [Nitrobacter sp. Nb-311A] Length = 478 Score = 37.7 bits (86), Expect = 0.70, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 52/170 (30%), Gaps = 16/170 (9%) Query: 16 NLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGF 75 N Y G + KLL ++R Y T+ D E H LD L Sbjct: 221 NAYHGEGPDGRPWPFGKLLYRLAEIPGIVRLRYSTSHPRDVEDSLIDAHRHLDALMPF-- 278 Query: 76 QVVAKVAKEFTEN--CGRKRVKSSMDVELAVDAFEQSEG-----LEHLVIFSGDG--CFT 126 V + ++ R S+ D +D F + + +V F G+ F Sbjct: 279 --VHLPVQSGSDRILAAMNRRHSASDYRRVIDRFRHARQDIAFSSDFIVGFPGETEEDFA 336 Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMA-SDQLRRQADYFMDLAYLKNEIAR 175 +A + + S S + +LR D+ + + Sbjct: 337 ATLALVGQIGYA-AAYSFKYSPRPGTPAAELREAVST-ADMDARLERLQK 384 >gi|332308197|ref|YP_004436048.1| arginine decarboxylase [Glaciecola agarilytica 4H-3-7+YE-5] gi|332175526|gb|AEE24780.1| arginine decarboxylase [Glaciecola agarilytica 4H-3-7+YE-5] Length = 640 Score = 37.7 bits (86), Expect = 0.70, Method: Composition-based stats. Identities = 19/153 (12%), Positives = 47/153 (30%), Gaps = 20/153 (13%) Query: 23 ALGFDIDYRKLLKAFRSRAI--VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAK 80 ID++ +++ + I + ++ + ++ Y G + Sbjct: 42 NKNMRIDFQSVIEEIKQEGIQFPVVVRFHDILRSQVACLNQTFIDTIEEAQYQGKYMGVY 101 Query: 81 VAKEF-----------TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG--DGCFTT 127 K +++ EL + + ++ L I +G D F Sbjct: 102 PVKVNQMREVVEEIVDAGAPFNYGLEAGSKAEL-ITVMAYNTNIDSLTILNGYKDAEFMR 160 Query: 128 LVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160 L ++ +K+ +V S+ + L A Sbjct: 161 LALLGRKLGRKMIVVIEKYSELGL----LVDAA 189 >gi|296088635|emb|CBI37626.3| unnamed protein product [Vitis vinifera] Length = 871 Score = 37.7 bits (86), Expect = 0.71, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 48/160 (30%), Gaps = 28/160 (17%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVG--DPEQQFSPLH 64 K++++ D N + F I S +RA + Sbjct: 51 KVSVWWDFENCNIPAGVNVFKI--------AHSITAAVRANGIKGPLQITAFGDVSQLAR 102 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAF---EQSEGLEHLVIFSG 121 + L G + K+S D L +D Q+ HL + SG Sbjct: 103 SNQEALSSTGINLAHIP----------NGGKNSADRSLLLDLMYWVSQNPPPAHLFLISG 152 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 D F +++ L+ V + S P AS L A Sbjct: 153 DRDFASILHRLRMSNYNVLLAS-----PGTASGVLCSAAS 187 >gi|225431392|ref|XP_002272192.1| PREDICTED: hypothetical protein [Vitis vinifera] Length = 990 Score = 37.7 bits (86), Expect = 0.71, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 48/160 (30%), Gaps = 28/160 (17%) Query: 7 KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVG--DPEQQFSPLH 64 K++++ D N + F I S +RA + Sbjct: 51 KVSVWWDFENCNIPAGVNVFKI--------AHSITAAVRANGIKGPLQITAFGDVSQLAR 102 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAF---EQSEGLEHLVIFSG 121 + L G + K+S D L +D Q+ HL + SG Sbjct: 103 SNQEALSSTGINLAHIP----------NGGKNSADRSLLLDLMYWVSQNPPPAHLFLISG 152 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 D F +++ L+ V + S P AS L A Sbjct: 153 DRDFASILHRLRMSNYNVLLAS-----PGTASGVLCSAAS 187 >gi|172039849|ref|YP_001799563.1| hypothetical protein cur_0169 [Corynebacterium urealyticum DSM 7109] gi|171851153|emb|CAQ04129.1| hypothetical protein cu0169 [Corynebacterium urealyticum DSM 7109] Length = 277 Score = 37.7 bits (86), Expect = 0.72, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 42/117 (35%), Gaps = 19/117 (16%) Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG---LEHLVIFS 120 P ++ L GF V AK + +S +D ++ +D + L+ L++ S Sbjct: 133 RPWVEALRNVGFAVFAKP---------KITEESDVDADM-LDLIRRRHSEGILDGLIVAS 182 Query: 121 GDG-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 DG F + L VT++ + L + F+DL + Sbjct: 183 ADGQNFRETLEELSE-DIPVTVIGF----REHVAWVLGNEKLRFVDLEDIPGVFREP 234 >gi|329947325|ref|ZP_08294590.1| hypothetical protein HMPREF9056_02497 [Actinomyces sp. oral taxon 170 str. F0386] gi|328525483|gb|EGF52529.1| hypothetical protein HMPREF9056_02497 [Actinomyces sp. oral taxon 170 str. F0386] Length = 200 Score = 37.7 bits (86), Expect = 0.73, Method: Composition-based stats. Identities = 24/150 (16%), Positives = 50/150 (33%), Gaps = 16/150 (10%) Query: 10 LFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYY---TTVVGDPEQQFSPLHPL 66 L +DG N+ A+ LG + R+ R R + AY + + E+ + Sbjct: 7 LLVDGENIDAT---LGMSVLGRRPEPEERPRWDRVLAYCDELSSADAAEGEEDEARALFF 63 Query: 67 LDWLHYNGFQVVAKVAKEFTENC-----GRKRVKSSMDVELAVDAFEQSEGLE-----HL 116 L+ + + + +D+ + +E E H+ Sbjct: 64 LNATSGHMPMSFIQALLAMDYRPVPLAGSGSNEEKVVDIGIQRTLEALAERAESGQEAHV 123 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVL 146 ++ S DG + + L + +V I+ Sbjct: 124 LLGSHDGDYIPQIERLLKAGAQVGILCFRE 153 >gi|326773081|ref|ZP_08232365.1| conserved hypothetical protein [Actinomyces viscosus C505] gi|326637713|gb|EGE38615.1| conserved hypothetical protein [Actinomyces viscosus C505] Length = 200 Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats. Identities = 21/159 (13%), Positives = 44/159 (27%), Gaps = 34/159 (21%) Query: 10 LFIDGANLYASSK--------ALGFDIDYRKLLKA---------FRSRAIVIRAYYYTTV 52 L +DG N+ A+ + ++L RA ++ Sbjct: 7 LLVDGENIDATLGMSVLGRRPEPEERPRWDRVLAYCDELSSAGTAEGEGNEARALFFLNA 66 Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG 112 + L ++ V + +D+ + +E Sbjct: 67 TSGHMP-----MSFIQALLAMDYRPVPL-------AGSGSNDEKVVDIGIQRTLEALAER 114 Query: 113 LE-----HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVL 146 E H+++ S DG + + L + KV I+ Sbjct: 115 AESGQEAHVLLGSHDGDYIPHIERLLQAGAKVGILCFRE 153 >gi|325066733|ref|ZP_08125406.1| hypothetical protein AoriK_02884 [Actinomyces oris K20] Length = 210 Score = 37.7 bits (86), Expect = 0.80, Method: Composition-based stats. Identities = 21/159 (13%), Positives = 44/159 (27%), Gaps = 34/159 (21%) Query: 10 LFIDGANLYASSK--------ALGFDIDYRKLLKA---------FRSRAIVIRAYYYTTV 52 L +DG N+ A+ + ++L RA ++ Sbjct: 17 LLVDGENIDATLGMSVLGRRPEPEERPRWDRVLAYCDELSSAGTAEGEGNEARALFFLNA 76 Query: 53 VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG 112 + L ++ V + +D+ + +E Sbjct: 77 TSGHMP-----MSFIQALLAMDYRPVPL-------AGSGSNDEKVVDIGIQRTLEALAER 124 Query: 113 LE-----HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVL 146 E H+++ S DG + + L + KV I+ Sbjct: 125 AESGQEAHVLLGSHDGDYIPHIERLLQAGAKVGILCFRE 163 >gi|222528190|ref|YP_002572072.1| 1-phosphofructokinase [Caldicellulosiruptor bescii DSM 6725] gi|222455037|gb|ACM59299.1| 1-phosphofructokinase [Caldicellulosiruptor bescii DSM 6725] Length = 315 Score = 37.3 bits (85), Expect = 0.86, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 32/82 (39%), Gaps = 7/82 (8%) Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG---- 121 L+D L ++V K +T+ D+ L D ++ + + + SG Sbjct: 82 LVDGLTRTNIKIVETAQKVYTDLNQNGFEVKKKDINLLFDKIDRIAKTDDIFVLSGSLPP 141 Query: 122 --DGC-FTTLVAALQRKVKKVT 140 D + L+ L+RK KV Sbjct: 142 GTDEDVYVELIRMLKRKGAKVI 163 >gi|15240156|ref|NP_200926.1| unknown protein [Arabidopsis thaliana] gi|332010048|gb|AED97431.1| Putative endonuclease or glycosyl hydrolase [Arabidopsis thaliana] Length = 346 Score = 37.3 bits (85), Expect = 0.87, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 54/162 (33%), Gaps = 16/162 (9%) Query: 7 KIALFIDGAN--LYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTT---VVGDPEQQFS 61 K +++ D N + G R +L + Y Y + +Q S Sbjct: 81 KTSVWWDIENCEVPKGCDPHGVAQSIRSVLSKSNFCGPLTI-YAYGDTNQIPSSVQQALS 139 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVI 118 L+ + ++ + VK D +L VD + + ++++ Sbjct: 140 STGVSLNHVPAVSNGLII--LYVLDDGEHLTGVKDGSDKKLLVDIMLWAMDNQAPANIML 197 Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160 SGD F+ L+ L K + + + P AS L A Sbjct: 198 ISGDKDFSYLLHKLGMKRYNILL-----ARPEKASTPLIAAA 234 >gi|306837071|ref|ZP_07470013.1| conserved hypothetical protein [Corynebacterium accolens ATCC 49726] gi|304567052|gb|EFM42675.1| conserved hypothetical protein [Corynebacterium accolens ATCC 49726] Length = 197 Score = 37.3 bits (85), Expect = 0.94, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 36/115 (31%), Gaps = 14/115 (12%) Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 + P ++ + GF V AK ++ + + + L +V+ S D Sbjct: 67 IRPWVEAIRNVGFGVFAKPKIHEDDDVDPDMID---------HIEKLRDDLAGVVVASAD 117 Query: 123 G-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 G F L+ L + VT++ F+DL + Sbjct: 118 GQNFQPLLEELIDEGLPVTVLGFHEHASWAVGHPEI----EFVDLEDIDGVFREP 168 >gi|115401736|ref|XP_001216456.1| predicted protein [Aspergillus terreus NIH2624] gi|114190397|gb|EAU32097.1| predicted protein [Aspergillus terreus NIH2624] Length = 280 Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats. Identities = 22/162 (13%), Positives = 48/162 (29%), Gaps = 26/162 (16%) Query: 8 IALFIDGANLYASSKALG-------------FDIDYRKLLKAFRSRAIV------IRAYY 48 + ++ID NL+ + + D +L + + ++ Sbjct: 18 VCIYIDNTNLWIEGRKTYAKKKGLDTRTDPTWRFDVGRLKTTLLKKITLPSENVEVKTNL 77 Query: 49 YTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE 108 Y + + + + ++H + +T + + D V A Sbjct: 78 YGSRPPPVDTVWEAIKCHEVYIHTSKRST-------WTGGEKGVDQQPTADAAFQVSADY 130 Query: 109 QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS 150 +E +I SGD + V + V + S S S Sbjct: 131 YTEVSSEYIIVSGDRDLLSAVNKIADSGFPVHVWSWKDSLAS 172 >gi|317178073|dbj|BAJ55862.1| hypothetical protein HPF16_1265 [Helicobacter pylori F16] Length = 222 Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats. Identities = 7/53 (13%), Positives = 22/53 (41%), Gaps = 2/53 (3%) Query: 86 TENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136 ++ + +D+++ +D + ++ +V+ SGD F + + Sbjct: 136 NDDFIYHAKQKGVDIKIGLDIATLALKKLVQKIVLISGDSDFVPAAKLARVEG 188 >gi|227501911|ref|ZP_03931960.1| conserved hypothetical protein [Corynebacterium accolens ATCC 49725] gi|227077405|gb|EEI15368.1| conserved hypothetical protein [Corynebacterium accolens ATCC 49725] Length = 197 Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 36/115 (31%), Gaps = 14/115 (12%) Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122 + P ++ + GF V AK ++ + + + L +V+ S D Sbjct: 67 IRPWVEAIRNVGFGVFAKPKIHEDDDVDPDMID---------HIEKLRDDLAGVVVASAD 117 Query: 123 G-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 G F L+ L + VT++ F+DL + Sbjct: 118 GQNFQPLLEELIDEGLPVTVLGFHEHASWAVGHPEID----FVDLEDIDGVFREP 168 >gi|227496350|ref|ZP_03926641.1| conserved hypothetical protein [Actinomyces urogenitalis DSM 15434] gi|226834126|gb|EEH66509.1| conserved hypothetical protein [Actinomyces urogenitalis DSM 15434] Length = 203 Score = 37.3 bits (85), Expect = 1.0, Method: Composition-based stats. Identities = 24/149 (16%), Positives = 51/149 (34%), Gaps = 15/149 (10%) Query: 10 LFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDW 69 L +DG N+ A+ LG + R+ R R + ++ T + + H L Sbjct: 11 LLVDGENIDAT---LGMSVLGRRPEPEERPRWDRVLSFCDTLSDQEAGGEDEDTHALFFL 67 Query: 70 LHYNGFQ-------VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLE-----HLV 117 +G ++A + + +D+ + +E +E ++ Sbjct: 68 NATSGHMPMSFVQALLAMDYRPIPLAGSGNPEEKVVDIGIQRTLDALAERVESGLSAQVL 127 Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVL 146 + S DG + + L KV ++ Sbjct: 128 LGSHDGDYIPQIERLLDAGAKVGVLCFKE 156 >gi|194289741|ref|YP_002005648.1| polysaccharide pyruvyl transferase [Cupriavidus taiwanensis LMG 19424] gi|193223576|emb|CAQ69581.1| putative Polysaccharide pyruvyl transferase [Cupriavidus taiwanensis LMG 19424] Length = 409 Score = 36.9 bits (84), Expect = 1.2, Method: Composition-based stats. Identities = 24/148 (16%), Positives = 52/148 (35%), Gaps = 7/148 (4%) Query: 14 GANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYN 73 G N + ++G + +L + SR + A Y +V + L Sbjct: 127 GKNARVALVSVGVAAGWSRLGRYLVSRFFALAAPQYVSVRDE---SSRRNIVGLGAGEAC 183 Query: 74 GFQVVAKVAKEFTENCGRKRVKSSMDVELAV-DAFEQSEGLEHLVIF---SGDGCFTTLV 129 ++ A ++ DV + V D + + + G G F LV Sbjct: 184 DVAIIPDPAILSASLYAEHGLEKRWDVGICVSDVESLHYNADLVSVAEQGGGLGMFVELV 243 Query: 130 AALQRKVKKVTIVSTVLSDPSMASDQLR 157 L++ ++V + + + ++A+ +R Sbjct: 244 HKLRQGGQRVVLFTNGAEEDNLAAAAVR 271 >gi|188528123|ref|YP_001910810.1| hypothetical protein HPSH_06900 [Helicobacter pylori Shi470] gi|188144363|gb|ACD48780.1| hypothetical protein HPSH_06900 [Helicobacter pylori Shi470] Length = 121 Score = 36.9 bits (84), Expect = 1.2, Method: Composition-based stats. Identities = 7/53 (13%), Positives = 22/53 (41%), Gaps = 2/53 (3%) Query: 86 TENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136 ++ + +D+++ +D + ++ +V+ SGD F + + Sbjct: 34 NDDFIYHAKQKGVDIKIGLDIATLALKKLVQKIVLISGDSDFVPAAKLARVEG 86 >gi|255537067|ref|XP_002509600.1| nucleic acid binding protein, putative [Ricinus communis] gi|223549499|gb|EEF50987.1| nucleic acid binding protein, putative [Ricinus communis] Length = 375 Score = 36.9 bits (84), Expect = 1.2, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 32/84 (38%), Gaps = 11/84 (13%) Query: 97 SMDVEL---AVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMAS 153 + DV L VD + E LV+ S D F ++ + + K +V + Sbjct: 219 AADVALREHIVDMMD-KRRAECLVLVSDDSDFVGVLKEAKLRCVKTVVVGDINDG----- 272 Query: 154 DQLRRQAD-YFMDLAYLKNEIARD 176 L+R AD F L + ++ Sbjct: 273 -ALKRVADAEFSWQEILMGKAKKE 295 >gi|156553899|ref|XP_001601444.1| PREDICTED: similar to ENSANGP00000010457 [Nasonia vitripennis] Length = 390 Score = 36.9 bits (84), Expect = 1.2, Method: Composition-based stats. Identities = 20/134 (14%), Positives = 42/134 (31%), Gaps = 9/134 (6%) Query: 11 FIDG----ANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 FID N +Y KL + + + +I T + L Sbjct: 93 FIDTGQRPQNFIRDVGLADRFEEYPKLRELIKLKDDLI---SETATPPMYLKTDLFAQNL 149 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVK-SSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 D ++ +E+ CG V+ + D + +D E + + ++ G Sbjct: 150 KDLNCKFDVILIEPPLEEYQRTCGATNVQLWNWDQIMELDIGEVAANRSFVFLWCGSSDG 209 Query: 126 TTLVAA-LQRKVKK 138 + L++ + Sbjct: 210 LDMGRFCLRKWGFR 223 >gi|256371062|ref|YP_003108886.1| hypothetical protein Afer_0244 [Acidimicrobium ferrooxidans DSM 10331] gi|256007646|gb|ACU53213.1| conserved hypothetical protein [Acidimicrobium ferrooxidans DSM 10331] Length = 189 Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats. Identities = 20/147 (13%), Positives = 38/147 (25%), Gaps = 20/147 (13%) Query: 10 LFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68 L +DG N+ LG + + R + +PL Sbjct: 8 LLVDGENIDGVLGQILGHRPEPNE------------RPRWDRVAGAAASWGSAPLKSYFF 55 Query: 69 WLHYNGFQVVAKVAKEFTENCGRKRV-----KSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 +G ++ + + G V +D + E +V+ S D Sbjct: 56 INATSG--LIPGPFIQAIRSHGYTPVLLSGPGKVVDDAIVATLGEIGRRHGSVVLASHDA 113 Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPS 150 F + L +V + Sbjct: 114 DFAPALEQLLDHGHRVALACFTEYVAG 140 >gi|256833264|ref|YP_003161991.1| hypothetical protein Jden_2050 [Jonesia denitrificans DSM 20603] gi|256686795|gb|ACV09688.1| conserved hypothetical protein [Jonesia denitrificans DSM 20603] Length = 192 Score = 36.9 bits (84), Expect = 1.3, Method: Composition-based stats. Identities = 22/168 (13%), Positives = 49/168 (29%), Gaps = 24/168 (14%) Query: 10 LFIDGANLYASS----KALGFDIDYRKLLKAFRSR-----AIVIRAYYYTTVVGDPEQQF 60 L +DG N+ A+ + D R + ++ Sbjct: 14 LLVDGENIDATLGMNVLGHRPNPDERPRWDRISEFARELWGQSVTKLFFLNASSGQMP-- 71 Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 P + L ++ + + + +D+ + + +++ S Sbjct: 72 ---MPFVQALLAMDYRPIPL---------SGENHEKVVDMGIQRTLDAIRDRDADVLLAS 119 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 DG F + AL +KV ++ + + L + F DL Sbjct: 120 HDGDFIPQIEALLDGTRKVGLLCFREFVNAQMAQ-LEDKGLTFYDLED 166 >gi|323439278|gb|EGA97003.1| hypothetical protein SAO11_1871 [Staphylococcus aureus O11] gi|323442519|gb|EGB00147.1| hypothetical protein SAO46_1439 [Staphylococcus aureus O46] Length = 78 Score = 36.5 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 9/65 (13%), Positives = 23/65 (35%), Gaps = 2/65 (3%) Query: 100 VELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL--R 157 + L + + ++ +++ +GD F + + + S + S + R Sbjct: 3 IGLDIASLSFKHQVDKIILIAGDSDFVPAAKLARTEGIDFVLDSLGADIRNNLSLHIDGR 62 Query: 158 RQADY 162 R D Sbjct: 63 RTCDE 67 >gi|224541746|ref|ZP_03682285.1| hypothetical protein CATMIT_00918 [Catenibacterium mitsuokai DSM 15897] gi|224525350|gb|EEF94455.1| hypothetical protein CATMIT_00918 [Catenibacterium mitsuokai DSM 15897] Length = 716 Score = 36.5 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 20/140 (14%), Positives = 41/140 (29%), Gaps = 12/140 (8%) Query: 26 FDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEF 85 I+ K++ I YY D + L +W G++ K Sbjct: 457 KKINNMKMMPFAPLFRETIAPVYYRRKREDVLSELPELLENEEWCE-MGYEEQCKYYDSL 515 Query: 86 TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTV 145 ++ + + S ++ L S ++ + + +KV + S Sbjct: 516 SKGGHNHH-----------EIRQVSWRVDDLHDSSKACRMLEIIQEAKEEGRKVIVFSFY 564 Query: 146 LSDPSMASDQLRRQADYFMD 165 L S L Q ++ Sbjct: 565 LDTIRKISKLLGNQCTEIIN 584 >gi|329296618|ref|ZP_08253954.1| pyrimidine utilization protein B [Plautia stali symbiont] Length = 236 Score = 36.5 bits (83), Expect = 1.5, Method: Composition-based stats. Identities = 21/145 (14%), Positives = 44/145 (30%), Gaps = 9/145 (6%) Query: 10 LFIDGANLYASSKAL----GFDIDYRK-LLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64 + +D N YAS GFD+ + ++ RA + + Sbjct: 34 IVVDMQNAYASQGGYLDLAGFDVSATQPVIARIHQAVTAARAAGMQIIWFQNGWDNQYVE 93 Query: 65 PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124 K ++ E G K D L + Q+ + ++ Sbjct: 94 ADDAGSPNFHKSNALKTMRQRPELHGTLLAKGGWDYALVDELVPQAG--DIVLPKPRYSG 151 Query: 125 F--TTLVAALQRKVKKVTIVSTVLS 147 F T L + L+ + + + + + + Sbjct: 152 FFNTPLDSMLRSRGIRHLVFTGIAT 176 >gi|56476616|ref|YP_158205.1| hypothetical protein ebB63 [Aromatoleum aromaticum EbN1] gi|56312659|emb|CAI07304.1| hypothetical protein ebB63 [Aromatoleum aromaticum EbN1] Length = 90 Score = 36.5 bits (83), Expect = 1.5, Method: Composition-based stats. Identities = 11/79 (13%), Positives = 28/79 (35%), Gaps = 12/79 (15%) Query: 100 VELAVDA--FEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLR 157 + + +D + + +V+ +GD F +R+ + + +D L Sbjct: 1 MRIGLDIASLTLKKQADTIVLVAGDSDFVPAAQLARREGMEFIL----DPLWQKVNDDL- 55 Query: 158 RQADYFMDLAYLKNEIARD 176 F + L++ + R Sbjct: 56 -----FEHIDGLQSGLKRP 69 >gi|48138147|ref|XP_393391.1| PREDICTED: methyltransferase-like protein 14 homolog [Apis mellifera] Length = 390 Score = 36.5 bits (83), Expect = 1.6, Method: Composition-based stats. Identities = 19/134 (14%), Positives = 43/134 (32%), Gaps = 9/134 (6%) Query: 11 FIDG----ANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 FID N +Y KL + + + +I T + + L Sbjct: 93 FIDTGQRPQNFIRDVGLADRFEEYPKLRELIKLKDDLI---AETATPPMYLKTDLLSYNL 149 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVK-SSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 + ++ +E+ CG V+ + D + +D E + + ++ G Sbjct: 150 KELNCKFDVILIEPPLEEYQRTCGATNVQLWNWDQIMELDIGEVAANRSFVFLWCGSSDG 209 Query: 126 TTLVAA-LQRKVKK 138 + L++ + Sbjct: 210 LDMGRFCLRKWGFR 223 >gi|114563957|ref|YP_751471.1| NAD(+) kinase [Shewanella frigidimarina NCIMB 400] gi|122299140|sp|Q07ZD2|PPNK_SHEFN RecName: Full=Probable inorganic polyphosphate/ATP-NAD kinase; Short=Poly(P)/ATP NAD kinase gi|114335250|gb|ABI72632.1| NAD(+) kinase [Shewanella frigidimarina NCIMB 400] Length = 309 Score = 36.5 bits (83), Expect = 1.6, Method: Composition-based stats. Identities = 20/77 (25%), Positives = 29/77 (37%), Gaps = 10/77 (12%) Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 L WL GF+V+ + GR + DV ++D E E + ++ GDG Sbjct: 43 LHHWLSMQGFKVIVE---------GRVSAELGADVC-SMDLLEMGEHCDLAIVVGGDGNM 92 Query: 126 TTLVAALQRKVKKVTIV 142 L R V V Sbjct: 93 LGAARVLARFNVAVIGV 109 >gi|302870855|ref|YP_003839491.1| 1-phosphofructokinase [Caldicellulosiruptor obsidiansis OB47] gi|302573714|gb|ADL41505.1| 1-phosphofructokinase [Caldicellulosiruptor obsidiansis OB47] Length = 311 Score = 36.2 bits (82), Expect = 1.9, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 52/139 (37%), Gaps = 15/139 (10%) Query: 25 GFDIDYRKLLKAFRSRAIVI------RAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78 G I+ K++KA ++I + ++ + D + F + +D L ++V Sbjct: 37 GKGINVSKVIKALGGQSIALGFLGNDNKDWFLKYLKDMQIDFDFI--FVDGLTRTNIKIV 94 Query: 79 AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG------DGC-FTTLVAA 131 K +T+ D+ L + ++ + + + SG D + L+ Sbjct: 95 ETAQKVYTDLNQNGFEVKKKDISLLFEKIDRIAKTDDIFVLSGSLPPGADEDVYVELIRM 154 Query: 132 LQRKVKKVTIVSTVLSDPS 150 L++K KV + + Sbjct: 155 LKQKGAKVIFDADGKALER 173 >gi|328956174|ref|YP_004373507.1| hypothetical protein Corgl_1593 [Coriobacterium glomerans PW2] gi|328456498|gb|AEB07692.1| hypothetical protein Corgl_1593 [Coriobacterium glomerans PW2] Length = 461 Score = 36.2 bits (82), Expect = 1.9, Method: Composition-based stats. Identities = 10/89 (11%), Positives = 20/89 (22%), Gaps = 14/89 (15%) Query: 50 TTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ 109 + + + H G + G + + + +D Sbjct: 84 FDWSAPNPAWWERARTMCEMAHDRGIRPALV-LIWCNYVPGTWASDMAASIGIEIDLMPI 142 Query: 110 S-------------EGLEHLVIFSGDGCF 125 S + + I SGD F Sbjct: 143 SEALRHIERVVHELGRFDPIYIVSGDTDF 171 >gi|224074705|ref|XP_002304433.1| predicted protein [Populus trichocarpa] gi|222841865|gb|EEE79412.1| predicted protein [Populus trichocarpa] Length = 300 Score = 36.2 bits (82), Expect = 1.9, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 26/68 (38%), Gaps = 10/68 (14%) Query: 97 SMDVEL---AVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMAS 153 + DV L VD + E V+ S D F ++ + + K +V V Sbjct: 134 AADVALKDHMVDMMD-KRRAECFVLVSDDSDFVHVLKEAKSRCLKTVVVGDVNDG----- 187 Query: 154 DQLRRQAD 161 L+R AD Sbjct: 188 -ALKRVAD 194 >gi|226947166|ref|YP_002802239.1| glucosamine--fructose-6-phosphate aminotransferase [Azotobacter vinelandii DJ] gi|226722093|gb|ACO81264.1| glucosamine--fructose-6-phosphate aminotransferase, isomerizing; GlmS [Azotobacter vinelandii DJ] Length = 611 Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats. Identities = 37/196 (18%), Positives = 63/196 (32%), Gaps = 37/196 (18%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 +A+ ID A A + G + + L+A + A+ G P ++ + H Sbjct: 34 VAV-IDAAGQLARCRRSGKIAELEQALRAAPLAGRLGIAHTRWATHGAPLERNAHPHCSA 92 Query: 68 D--WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 + +NG +E + G + +S D E+ V G Sbjct: 93 GEVAVVHNGIIENYLQLRERLQGLGYRF-ESDTDTEVIVHLLHHKLQET--------GDL 143 Query: 126 TTLVAALQ-----RKVKKVT-----------------IVSTVLSDPSMASD--QLRRQAD 161 TT + A+ V ++ + +ASD LR+ D Sbjct: 144 TTALKAIIPELHGAYGLAVIGAGQPDRLLAARSGSPLVIGLGHGENFLASDQIALRQVTD 203 Query: 162 YFMDLAY-LKNEIARD 176 F+ L EI RD Sbjct: 204 RFVYLEEGDIAEIRRD 219 >gi|296242346|ref|YP_003649833.1| hypothetical protein Tagg_0608 [Thermosphaera aggregans DSM 11486] gi|296094930|gb|ADG90881.1| hypothetical protein Tagg_0608 [Thermosphaera aggregans DSM 11486] Length = 302 Score = 36.2 bits (82), Expect = 2.2, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 26/72 (36%), Gaps = 10/72 (13%) Query: 114 EHLVI--FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD--LAYL 169 + +VI S D FT LQ T+ +++ S R D F L L Sbjct: 78 DTVVIEGVSEDMDFTVYCKILQ---VFYTVDTSIKVVCKGVS---RDICDKFFTPILDEL 131 Query: 170 KNEIARDPDEDK 181 + I + P E Sbjct: 132 REYIVKAPKEKP 143 >gi|332022437|gb|EGI62745.1| Methyltransferase-like protein 14-like protein [Acromyrmex echinatior] Length = 392 Score = 35.8 bits (81), Expect = 2.4, Method: Composition-based stats. Identities = 19/134 (14%), Positives = 43/134 (32%), Gaps = 9/134 (6%) Query: 11 FIDG----ANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 FID N +Y KL + + + +I T + + L Sbjct: 95 FIDTGQRPQNFIRDVGLADRFEEYPKLRELIKLKDDLI---AETATPPMYLKTDLLSYNL 151 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVK-SSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 + ++ +E+ CG V+ + D + +D E + + ++ G Sbjct: 152 KELNCKFDVILIEPPLEEYQRTCGATNVQLWNWDQIMELDIGEVAANRSFVFLWCGSSDG 211 Query: 126 TTLVAA-LQRKVKK 138 + L++ + Sbjct: 212 LDMGRFCLRKWGFR 225 >gi|297809527|ref|XP_002872647.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata] gi|297318484|gb|EFH48906.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata] Length = 365 Score = 35.8 bits (81), Expect = 2.5, Method: Composition-based stats. Identities = 10/58 (17%), Positives = 23/58 (39%), Gaps = 7/58 (12%) Query: 104 VDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 VD + +E +V+ S D + ++ + + + ++ L+R AD Sbjct: 217 VDMMD-KREVECVVLVSDDSDYAGILWEAKERCLRTVVIGDSNEG------ALKRVAD 267 >gi|156552882|ref|XP_001600832.1| PREDICTED: similar to limkain b1 [Nasonia vitripennis] Length = 1443 Score = 35.8 bits (81), Expect = 2.6, Method: Composition-based stats. Identities = 29/173 (16%), Positives = 56/173 (32%), Gaps = 20/173 (11%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67 I +F D N + R + F + + V ++ + L Sbjct: 214 IGVFWDIENCQVPKGRSAMAVT-RVIRDKFFNGYK---EAEFIVVCDVQKENKQIVQELN 269 Query: 68 DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTT 127 D K + R+ ++ D + A +++ SGD F Sbjct: 270 DAQVDLIHVSATC--KNAADEKLRQSIRRFADTHGSPAA---------IILISGDINFAG 318 Query: 128 LVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI-ARDPDE 179 ++ L+ + KK+ ++ L S+ L AD D L + +R P + Sbjct: 319 DLSDLRHR-KKIHVI---LLHKENTSEALILCADEHYDFTKLLQPLPSRTPSK 367 >gi|124004764|ref|ZP_01689608.1| hypothetical protein M23134_01476 [Microscilla marina ATCC 23134] gi|123989887|gb|EAY29416.1| hypothetical protein M23134_01476 [Microscilla marina ATCC 23134] Length = 55 Score = 35.8 bits (81), Expect = 2.6, Method: Composition-based stats. Identities = 8/50 (16%), Positives = 23/50 (46%) Query: 8 IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57 +FID N++ ++ G+ +D+ K + + + + + + + E Sbjct: 6 TVVFIDTQNVHLGIQSCGWLLDWAKFMTLLKDKFKADKVCMFLGYLSEYE 55 >gi|296446363|ref|ZP_06888308.1| Radical SAM domain protein [Methylosinus trichosporium OB3b] gi|296256136|gb|EFH03218.1| Radical SAM domain protein [Methylosinus trichosporium OB3b] Length = 517 Score = 35.8 bits (81), Expect = 2.7, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 31/85 (36%), Gaps = 11/85 (12%) Query: 97 SMDVELA------VDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS 150 +D+E+ VD +E + S L +R+ KKV I S Sbjct: 47 DLDIEICDEGVAPVDLDHPAEWIAITGKVSQRRRMIALADEFRRRGKKVII---GGPYAS 103 Query: 151 MASDQLRRQADYFM--DLAYLKNEI 173 ++ D LR D + + + EI Sbjct: 104 LSPDHLRDHCDVLVCGEAEEIAGEI 128 >gi|50084811|ref|YP_046321.1| 2,4-dienoyl-CoA reductase [Acinetobacter sp. ADP1] gi|49530787|emb|CAG68499.1| 2,4-dienoyl-CoA reductase [Acinetobacter sp. ADP1] Length = 674 Score = 35.8 bits (81), Expect = 2.7, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 34/91 (37%), Gaps = 4/91 (4%) Query: 69 WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTL 128 W+H G + K K + + + A ++++VI +G +T + Sbjct: 580 WIHRTGLKHRN--VKMIAGASYEKIDDQGLHIMIGDKATVL--EVDNVVICAGQESYTAM 635 Query: 129 VAALQRKVKKVTIVSTVLSDPSMASDQLRRQ 159 AL+ K V ++ + + + RQ Sbjct: 636 YEALRESGKNVHLIGGAKEAGELDAKRAIRQ 666 >gi|326775720|ref|ZP_08234985.1| allantoinase [Streptomyces cf. griseus XylebKG-1] gi|326656053|gb|EGE40899.1| allantoinase [Streptomyces cf. griseus XylebKG-1] Length = 447 Score = 35.8 bits (81), Expect = 2.8, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 3/63 (4%) Query: 101 ELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160 L A + + L + S D L+AA +R+ +VT+ S ++ ++++ A Sbjct: 224 GLIAHAKRLNARVHVLHLSSSDA--LPLIAAAKREGVRVTVESCPHFL-TLTAEEVPDGA 280 Query: 161 DYF 163 F Sbjct: 281 TEF 283 >gi|291448775|ref|ZP_06588165.1| allantoinase [Streptomyces roseosporus NRRL 15998] gi|291351722|gb|EFE78626.1| allantoinase [Streptomyces roseosporus NRRL 15998] Length = 444 Score = 35.8 bits (81), Expect = 2.8, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 3/63 (4%) Query: 101 ELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160 L A + + L + S D L+AA +R+ +VT+ S ++ ++++ A Sbjct: 221 GLIAHAKRLNARVHVLHLSSSDA--LPLIAAAKREGVRVTVESCPHFL-TLTAEEVPDGA 277 Query: 161 DYF 163 F Sbjct: 278 TEF 280 >gi|239945313|ref|ZP_04697250.1| putative allantoinase [Streptomyces roseosporus NRRL 15998] gi|239991772|ref|ZP_04712436.1| putative allantoinase [Streptomyces roseosporus NRRL 11379] Length = 447 Score = 35.8 bits (81), Expect = 2.8, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 3/63 (4%) Query: 101 ELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160 L A + + L + S D L+AA +R+ +VT+ S ++ ++++ A Sbjct: 224 GLIAHAKRLNARVHVLHLSSSDA--LPLIAAAKREGVRVTVESCPHFL-TLTAEEVPDGA 280 Query: 161 DYF 163 F Sbjct: 281 TEF 283 >gi|182435082|ref|YP_001822801.1| putative allantoinase [Streptomyces griseus subsp. griseus NBRC 13350] gi|178463598|dbj|BAG18118.1| putative allantoinase [Streptomyces griseus subsp. griseus NBRC 13350] Length = 447 Score = 35.8 bits (81), Expect = 2.8, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 3/63 (4%) Query: 101 ELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160 L A + + L + S D L+AA +R+ +VT+ S ++ ++++ A Sbjct: 224 GLIAHAKRLNARVHVLHLSSSDA--LPLIAAAKREGVRVTVESCPHFL-TLTAEEVPDGA 280 Query: 161 DYF 163 F Sbjct: 281 TEF 283 >gi|84496671|ref|ZP_00995525.1| hypothetical protein JNB_04090 [Janibacter sp. HTCC2649] gi|84383439|gb|EAP99320.1| hypothetical protein JNB_04090 [Janibacter sp. HTCC2649] Length = 198 Score = 35.8 bits (81), Expect = 2.8, Method: Composition-based stats. Identities = 23/145 (15%), Positives = 44/145 (30%), Gaps = 22/145 (15%) Query: 10 LFIDGANLYASSK--------ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 + +DG N+ A+ + +LL R + S Sbjct: 21 VLVDGENIDATLGTSILGRRPQPDERPRWDRLLSFARDTWDQDVKGLFFLNAST-----S 75 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 + L+ GF V G VK +DV + + +++ S Sbjct: 76 MPMSFIQALNALGFTPVPL--------SGDADVKV-VDVAIQKTLRAIRDRDADVMLVSH 126 Query: 122 DGCFTTLVAALQRKVKKVTIVSTVL 146 DG F + L ++V +++ Sbjct: 127 DGDFLEEIEGLLDDDRRVGVMAFRE 151 >gi|302798865|ref|XP_002981192.1| hypothetical protein SELMODRAFT_113855 [Selaginella moellendorffii] gi|300151246|gb|EFJ17893.1| hypothetical protein SELMODRAFT_113855 [Selaginella moellendorffii] Length = 127 Score = 35.4 bits (80), Expect = 3.1, Method: Composition-based stats. Identities = 23/140 (16%), Positives = 45/140 (32%), Gaps = 27/140 (19%) Query: 1 MFDPREKIALFIDGANLYASSKALGFDI--DYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58 M K +++ D N + F I + +L AF + + Y Sbjct: 5 MEASVAKTSVWWDIENCRPPADVNPFHIARNISNVLHAFNFFGPLTISAY--------GD 56 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA---FEQSEGLEH 115 + + + L G + S+ D + ++ + + Sbjct: 57 TYQLTRHVQNALTSTGISLNHIP--------------SASDKAILMNMAFWTSDNPPPAN 102 Query: 116 LVIFSGDGCFTTLVAALQRK 135 +V+ SGD F+ L+ LQ K Sbjct: 103 VVLISGDQDFSPLLHRLQMK 122 >gi|237751636|ref|ZP_04582116.1| predicted protein [Helicobacter bilis ATCC 43879] gi|229373002|gb|EEO23393.1| predicted protein [Helicobacter bilis ATCC 43879] Length = 206 Score = 35.4 bits (80), Expect = 3.1, Method: Composition-based stats. Identities = 25/165 (15%), Positives = 48/165 (29%), Gaps = 34/165 (20%) Query: 6 EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65 + +ALFID L A+ L DY + + Y T Sbjct: 3 KNLALFIDCDRLEAAFMTL--IFDYLQ-----NEGYNICVKRAYITKDNLDLWYSQLDRH 55 Query: 66 LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDG 123 N +++ ++ L+VD + S + + I S Sbjct: 56 YFRISIGN--------------------SQANNNMRLSVDVSKALYSGNYDSIAIASNYR 95 Query: 124 CFTTLVAALQRKVKKVTIVS-TVLSDPSMASDQLRRQADYFMDLA 167 F L + ++ K + + + L+R + +L Sbjct: 96 EFGVLASEVRTKGLEALCFYQFSKGNEAF----LKRAYNIIYNLE 136 >gi|255324145|ref|ZP_05365269.1| conserved hypothetical protein [Corynebacterium tuberculostearicum SK141] gi|311740400|ref|ZP_07714229.1| conserved hypothetical protein [Corynebacterium pseudogenitalium ATCC 33035] gi|255298846|gb|EET78139.1| conserved hypothetical protein [Corynebacterium tuberculostearicum SK141] gi|311304584|gb|EFQ80658.1| conserved hypothetical protein [Corynebacterium pseudogenitalium ATCC 33035] Length = 197 Score = 35.4 bits (80), Expect = 3.2, Method: Composition-based stats. Identities = 30/180 (16%), Positives = 52/180 (28%), Gaps = 29/180 (16%) Query: 10 LFIDGANLYASSKAL---------GFDID-YRKLLKAFRSRAIVI-RAYYYTTVVGDPEQ 58 L D N+ +L D + L RA +T V Sbjct: 6 LVWDAPNMDMGLGSLLGGRPTAAHRPRFDAIGRWLVHLAQDVDAEPRADVFTNVTPGGAD 65 Query: 59 QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVI 118 + P ++ + GF V AK ++ + E L +++ Sbjct: 66 ---VIRPWVEAIRNVGFGVFAKPKIHEDDDVDPDMLD---------HIESLREDLAGVIV 113 Query: 119 FSGDG-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177 S DG F + L + VT++ F+DL ++ R+P Sbjct: 114 ASADGQNFQEPLEELIAEGLPVTVLGFHEHAAWAVGHADIN----FVDLEDIEGVF-REP 168 >gi|262279291|ref|ZP_06057076.1| 2,4-dienoyl-CoA reductase [Acinetobacter calcoaceticus RUH2202] gi|262259642|gb|EEY78375.1| 2,4-dienoyl-CoA reductase [Acinetobacter calcoaceticus RUH2202] Length = 674 Score = 35.4 bits (80), Expect = 3.2, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 25/59 (42%) Query: 101 ELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQ 159 + +D ++H+VI +G FT + L+ K V ++ + + + RQ Sbjct: 608 HITIDGKPSVLEVDHVVICAGQESFTAMYEQLKEDGKNVHLIGGAKEAGELDAKRAIRQ 666 >gi|170020255|ref|YP_001725209.1| ATP-dependent RNA helicase HrpA [Escherichia coli ATCC 8739] gi|169755183|gb|ACA77882.1| ATP-dependent helicase HrpA [Escherichia coli ATCC 8739] Length = 1300 Score = 35.4 bits (80), Expect = 3.4, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 41/120 (34%), Gaps = 4/120 (3%) Query: 22 KALGFDIDYRKLLKAFRSRAIV-IRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAK 80 ++L D L + R + I T + F+ + +V + Sbjct: 202 RSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYR 261 Query: 81 VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVT 140 E ++ R ++++ D AVD Q + L+ SG+ AL + + T Sbjct: 262 PIVEEADDTERDQLQAIFD---AVDELSQESHGDILIFMSGEREIRDTADALNKLNLRHT 318 >gi|315082256|gb|EFT54232.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL078PA1] Length = 497 Score = 35.4 bits (80), Expect = 3.4, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 37/106 (34%), Gaps = 15/106 (14%) Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S L LL + G++ + K ++ MDV DA LEH Sbjct: 78 SRLQMLLRGQNLLGYRHYNDEVV---DKFVEKSAENGMDVFRVFDALNDPRNLEH----- 129 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 +AA+++ K + P + +QAD +D+ Sbjct: 130 -------AMAAVKKTGKHAQGTICYTTSPIHTPESFVKQADRLIDM 168 >gi|314968745|gb|EFT12843.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL037PA1] Length = 497 Score = 35.4 bits (80), Expect = 3.4, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 37/106 (34%), Gaps = 15/106 (14%) Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S L LL + G++ + K ++ MDV DA LEH Sbjct: 78 SRLQMLLRGQNLLGYRHYNDEVV---DKFVEKSAENGMDVFRVFDALNDPRNLEH----- 129 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 +AA+++ K + P + +QAD +D+ Sbjct: 130 -------AMAAVKKTGKHAQGTICYTTSPIHTPESFVKQADRLIDM 168 >gi|313836417|gb|EFS74131.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL037PA2] gi|314928882|gb|EFS92713.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL044PA1] gi|314971240|gb|EFT15338.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL037PA3] gi|328906375|gb|EGG26150.1| HMGL-like protein [Propionibacterium sp. P08] Length = 497 Score = 35.4 bits (80), Expect = 3.4, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 37/106 (34%), Gaps = 15/106 (14%) Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S L LL + G++ + K ++ MDV DA LEH Sbjct: 78 SRLQMLLRGQNLLGYRHYNDEVV---DKFVEKSAENGMDVFRVFDALNDPRNLEH----- 129 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 +AA+++ K + P + +QAD +D+ Sbjct: 130 -------AMAAVKKTGKHAQGTICYTTSPIHTPESFVKQADRLIDM 168 >gi|313829830|gb|EFS67544.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL063PA2] Length = 497 Score = 35.4 bits (80), Expect = 3.4, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 37/106 (34%), Gaps = 15/106 (14%) Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S L LL + G++ + K ++ MDV DA LEH Sbjct: 78 SRLQMLLRGQNLLGYRHYNDEVV---DKFVEKSAENGMDVFRVFDALNDPRNLEH----- 129 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 +AA+++ K + P + +QAD +D+ Sbjct: 130 -------AMAAVKKTGKHAQGTICYTTSPIHTPESFVKQADRLIDM 168 >gi|282854788|ref|ZP_06264122.1| HMGL-like protein [Propionibacterium acnes J139] gi|289425765|ref|ZP_06427520.1| HMGL-like protein [Propionibacterium acnes SK187] gi|289428002|ref|ZP_06429706.1| HMGL-like protein [Propionibacterium acnes J165] gi|295131536|ref|YP_003582199.1| Methylmalonyl-CoA:Pyruvate transcarboxylase 5S subunit [Propionibacterium acnes SK137] gi|282581934|gb|EFB87317.1| HMGL-like protein [Propionibacterium acnes J139] gi|289153871|gb|EFD02577.1| HMGL-like protein [Propionibacterium acnes SK187] gi|289158885|gb|EFD07085.1| HMGL-like protein [Propionibacterium acnes J165] gi|291375313|gb|ADD99167.1| Methylmalonyl-CoA:Pyruvate transcarboxylase 5S subunit [Propionibacterium acnes SK137] gi|313763813|gb|EFS35177.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL013PA1] gi|313771676|gb|EFS37642.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL074PA1] gi|313793794|gb|EFS41825.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL110PA1] gi|313803108|gb|EFS44316.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL110PA2] gi|313808321|gb|EFS46792.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL087PA2] gi|313810499|gb|EFS48213.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL083PA1] gi|313813867|gb|EFS51581.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL025PA1] gi|313817024|gb|EFS54738.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL059PA1] gi|313818061|gb|EFS55775.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL046PA2] gi|313820920|gb|EFS58634.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL036PA1] gi|313824010|gb|EFS61724.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL036PA2] gi|313827056|gb|EFS64770.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL063PA1] gi|313831539|gb|EFS69253.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL007PA1] gi|313832526|gb|EFS70240.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL056PA1] gi|313839267|gb|EFS76981.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL086PA1] gi|314916593|gb|EFS80424.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL005PA4] gi|314918935|gb|EFS82766.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL050PA1] gi|314920956|gb|EFS84787.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL050PA3] gi|314924469|gb|EFS88300.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL001PA1] gi|314926947|gb|EFS90778.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL036PA3] gi|314932362|gb|EFS96193.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL067PA1] gi|314956671|gb|EFT00923.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL027PA1] gi|314961766|gb|EFT05867.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL002PA2] gi|314964750|gb|EFT08850.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL082PA1] gi|314967319|gb|EFT11418.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL082PA2] gi|314974891|gb|EFT18986.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL053PA1] gi|314978016|gb|EFT22110.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL045PA1] gi|314981710|gb|EFT25803.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL110PA3] gi|314984572|gb|EFT28664.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL005PA1] gi|314988232|gb|EFT32323.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL005PA2] gi|314990319|gb|EFT34410.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL005PA3] gi|315079281|gb|EFT51284.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL053PA2] gi|315087415|gb|EFT59391.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL002PA3] gi|315089831|gb|EFT61807.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL072PA1] gi|315092475|gb|EFT64451.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL110PA4] gi|315094719|gb|EFT66695.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL060PA1] gi|315095494|gb|EFT67470.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL038PA1] gi|315100133|gb|EFT72109.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL059PA2] gi|315102455|gb|EFT74431.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL046PA1] gi|315102879|gb|EFT74855.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL050PA2] gi|315109628|gb|EFT81604.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL030PA2] gi|327326505|gb|EGE68293.1| oxaloacetate decarboxylase, alpha subunit [Propionibacterium acnes HL096PA3] gi|327328565|gb|EGE70325.1| oxaloacetate decarboxylase, alpha subunit [Propionibacterium acnes HL103PA1] gi|327332772|gb|EGE74504.1| oxaloacetate decarboxylase, alpha subunit [Propionibacterium acnes HL096PA2] gi|327335164|gb|EGE76874.1| oxaloacetate decarboxylase, alpha subunit [Propionibacterium acnes HL097PA1] gi|327448392|gb|EGE95046.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL043PA2] gi|327448467|gb|EGE95121.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL043PA1] gi|327449674|gb|EGE96328.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL013PA2] gi|327455778|gb|EGF02433.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL087PA3] gi|327456126|gb|EGF02781.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL092PA1] gi|327457924|gb|EGF04579.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL083PA2] gi|328757094|gb|EGF70710.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL087PA1] gi|328757289|gb|EGF70905.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL020PA1] gi|328757472|gb|EGF71088.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL025PA2] gi|328762048|gb|EGF75553.1| oxaloacetate decarboxylase, alpha subunit [Propionibacterium acnes HL099PA1] gi|332676405|gb|AEE73221.1| methylmalonyl-CoA carboxyltransferase 5S subunit [Propionibacterium acnes 266] Length = 497 Score = 35.4 bits (80), Expect = 3.4, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 37/106 (34%), Gaps = 15/106 (14%) Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S L LL + G++ + K ++ MDV DA LEH Sbjct: 78 SRLQMLLRGQNLLGYRHYNDEVV---DKFVEKSAENGMDVFRVFDALNDPRNLEH----- 129 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 +AA+++ K + P + +QAD +D+ Sbjct: 130 -------AMAAVKKTGKHAQGTICYTTSPIHTPESFVKQADRLIDM 168 >gi|50843454|ref|YP_056681.1| oxaloacetate decarboxylase [Propionibacterium acnes KPA171202] gi|50841056|gb|AAT83723.1| methylmalonyl-CoA carboxyltransferase [Propionibacterium acnes KPA171202] gi|315107798|gb|EFT79774.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL030PA1] Length = 497 Score = 35.4 bits (80), Expect = 3.4, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 37/106 (34%), Gaps = 15/106 (14%) Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S L LL + G++ + K ++ MDV DA LEH Sbjct: 78 SRLQMLLRGQNLLGYRHYNDEVV---DKFVEKSAENGMDVFRVFDALNDPRNLEH----- 129 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 +AA+++ K + P + +QAD +D+ Sbjct: 130 -------AMAAVKKTGKHAQGTICYTTSPIHTPESFVKQADRLIDM 168 >gi|188495607|ref|ZP_03002877.1| ATP-dependent helicase HrpA [Escherichia coli 53638] gi|188490806|gb|EDU65909.1| ATP-dependent helicase HrpA [Escherichia coli 53638] Length = 1300 Score = 35.4 bits (80), Expect = 3.4, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 41/120 (34%), Gaps = 4/120 (3%) Query: 22 KALGFDIDYRKLLKAFRSRAIV-IRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAK 80 ++L D L + R + I T + F+ + +V + Sbjct: 202 RSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYR 261 Query: 81 VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVT 140 E ++ R ++++ D AVD Q + L+ SG+ AL + + T Sbjct: 262 PIVEEADDTERDQLQAIFD---AVDELSQESHGDILIFMSGEREIRDTADALNKLNLRHT 318 >gi|307138062|ref|ZP_07497418.1| ATP-dependent RNA helicase HrpA [Escherichia coli H736] gi|331641987|ref|ZP_08343122.1| ATP-dependent helicase HrpA [Escherichia coli H736] gi|331038785|gb|EGI11005.1| ATP-dependent helicase HrpA [Escherichia coli H736] Length = 1300 Score = 35.4 bits (80), Expect = 3.5, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 41/120 (34%), Gaps = 4/120 (3%) Query: 22 KALGFDIDYRKLLKAFRSRAIV-IRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAK 80 ++L D L + R + I T + F+ + +V + Sbjct: 202 RSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYR 261 Query: 81 VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVT 140 E ++ R ++++ D AVD Q + L+ SG+ AL + + T Sbjct: 262 PIVEEADDTERDQLQAIFD---AVDELSQESHGDILIFMSGEREIRDTADALNKLNLRHT 318 >gi|299769897|ref|YP_003731923.1| 2,4-dienoyl-CoA reductase [NADPH](2,4-dienoyl coenzymeA reductase) [Acinetobacter sp. DR1] gi|298699985|gb|ADI90550.1| 2,4-dienoyl-CoA reductase [NADPH](2,4-dienoyl coenzymeA reductase) [Acinetobacter sp. DR1] Length = 674 Score = 35.4 bits (80), Expect = 3.5, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 26/59 (44%) Query: 101 ELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQ 159 + +D ++H+VI +G FT + L+ + K V ++ + + + RQ Sbjct: 608 HITIDGQPSVLEVDHVVICAGQESFTAMYDQLKTEGKNVHLIGGAKEAGELDAKRAIRQ 666 >gi|145698255|ref|NP_415931.4| predicted ATP-dependent helicase [Escherichia coli str. K-12 substr. MG1655] gi|170081089|ref|YP_001730409.1| ATP-dependent helicase [Escherichia coli str. K-12 substr. DH10B] gi|238900641|ref|YP_002926437.1| ATP-dependent helicase [Escherichia coli BW2952] gi|256022910|ref|ZP_05436775.1| ATP-dependent RNA helicase HrpA [Escherichia sp. 4_1_40B] gi|300950296|ref|ZP_07164231.1| ATP-dependent helicase HrpA [Escherichia coli MS 116-1] gi|300954073|ref|ZP_07166551.1| ATP-dependent helicase HrpA [Escherichia coli MS 175-1] gi|301017667|ref|ZP_07182340.1| ATP-dependent helicase HrpA [Escherichia coli MS 196-1] gi|301647118|ref|ZP_07246940.1| ATP-dependent helicase HrpA [Escherichia coli MS 146-1] gi|13638202|sp|P43329|HRPA_ECOLI RecName: Full=ATP-dependent RNA helicase hrpA gi|145693127|gb|AAC74495.2| predicted ATP-dependent helicase [Escherichia coli str. K-12 substr. MG1655] gi|169888924|gb|ACB02631.1| ATP-dependent helicase [Escherichia coli str. K-12 substr. DH10B] gi|238860044|gb|ACR62042.1| ATP-dependent helicase [Escherichia coli BW2952] gi|260449458|gb|ACX39880.1| ATP-dependent helicase HrpA [Escherichia coli DH1] gi|299882705|gb|EFI90916.1| ATP-dependent helicase HrpA [Escherichia coli MS 196-1] gi|300318932|gb|EFJ68716.1| ATP-dependent helicase HrpA [Escherichia coli MS 175-1] gi|300450354|gb|EFK13974.1| ATP-dependent helicase HrpA [Escherichia coli MS 116-1] gi|301074707|gb|EFK89513.1| ATP-dependent helicase HrpA [Escherichia coli MS 146-1] gi|315136053|dbj|BAJ43212.1| ATP-dependent RNA helicase HrpA [Escherichia coli DH1] gi|323942174|gb|EGB38347.1| ATP-dependent helicase HrpA [Escherichia coli E482] Length = 1300 Score = 35.4 bits (80), Expect = 3.5, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 41/120 (34%), Gaps = 4/120 (3%) Query: 22 KALGFDIDYRKLLKAFRSRAIV-IRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAK 80 ++L D L + R + I T + F+ + +V + Sbjct: 202 RSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYR 261 Query: 81 VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVT 140 E ++ R ++++ D AVD Q + L+ SG+ AL + + T Sbjct: 262 PIVEEADDTERDQLQAIFD---AVDELSQESHGDILIFMSGEREIRDTADALNKLNLRHT 318 >gi|157160891|ref|YP_001458209.1| ATP-dependent RNA helicase HrpA [Escherichia coli HS] gi|157066571|gb|ABV05826.1| ATP-dependent helicase HrpA [Escherichia coli HS] Length = 1300 Score = 35.4 bits (80), Expect = 3.5, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 41/120 (34%), Gaps = 4/120 (3%) Query: 22 KALGFDIDYRKLLKAFRSRAIV-IRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAK 80 ++L D L + R + I T + F+ + +V + Sbjct: 202 RSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYR 261 Query: 81 VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVT 140 E ++ R ++++ D AVD Q + L+ SG+ AL + + T Sbjct: 262 PIVEEADDTERDQLQAIFD---AVDELSQESHGDILIFMSGEREIRDTADALNKLNLRHT 318 >gi|291545849|emb|CBL18957.1| Protein of unknown function DUF88 [Ruminococcus sp. SR1/5] Length = 78 Score = 35.4 bits (80), Expect = 3.6, Method: Composition-based stats. Identities = 12/92 (13%), Positives = 25/92 (27%), Gaps = 18/92 (19%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 D +IA+ ID N+ S K + +D + I Y + Sbjct: 1 MDNELRIAILIDADNV--SDKYIKIIVD------EVANIGIATYKRIYGDWTSARLSSWK 52 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKR 93 + ++++ G+ Sbjct: 53 K----------VLLEDSIIPIQQYSYTTGKTP 74 >gi|312971579|ref|ZP_07785754.1| ATP-dependent helicase HrpA [Escherichia coli 1827-70] gi|310336176|gb|EFQ01376.1| ATP-dependent helicase HrpA [Escherichia coli 1827-70] Length = 1281 Score = 35.4 bits (80), Expect = 3.6, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 41/120 (34%), Gaps = 4/120 (3%) Query: 22 KALGFDIDYRKLLKAFRSRAIV-IRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAK 80 ++L D L + R + I T + F+ + +V + Sbjct: 183 RSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYR 242 Query: 81 VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVT 140 E ++ R ++++ D AVD Q + L+ SG+ AL + + T Sbjct: 243 PIVEEADDTERDQLQAIFD---AVDELSQESHGDILIFMSGEREIRDTADALNKLNLRHT 299 >gi|89108258|ref|AP_002038.1| ATP-dependent helicase [Escherichia coli str. K-12 substr. W3110] gi|1742304|dbj|BAA15029.1| ATP-dependent helicase [Escherichia coli str. K12 substr. W3110] Length = 1281 Score = 35.4 bits (80), Expect = 3.6, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 41/120 (34%), Gaps = 4/120 (3%) Query: 22 KALGFDIDYRKLLKAFRSRAIV-IRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAK 80 ++L D L + R + I T + F+ + +V + Sbjct: 183 RSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYR 242 Query: 81 VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVT 140 E ++ R ++++ D AVD Q + L+ SG+ AL + + T Sbjct: 243 PIVEEADDTERDQLQAIFD---AVDELSQESHGDILIFMSGEREIRDTADALNKLNLRHT 299 >gi|117921344|ref|YP_870536.1| inorganic polyphosphate/ATP-NAD kinase [Shewanella sp. ANA-3] gi|189037393|sp|A0KZB1|PPNK_SHESA RecName: Full=Probable inorganic polyphosphate/ATP-NAD kinase; Short=Poly(P)/ATP NAD kinase gi|117613676|gb|ABK49130.1| ATP-NAD/AcoX kinase [Shewanella sp. ANA-3] Length = 309 Score = 35.4 bits (80), Expect = 3.7, Method: Composition-based stats. Identities = 11/41 (26%), Positives = 15/41 (36%) Query: 102 LAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIV 142 +AVD E + ++ GDG L R V V Sbjct: 69 IAVDLLEIGARCDLAIVVGGDGNMLGAARVLARFDVGVIGV 109 >gi|312143592|ref|YP_003995038.1| RNA modification enzyme, MiaB family [Halanaerobium sp. 'sapolanicus'] gi|311904243|gb|ADQ14684.1| RNA modification enzyme, MiaB family [Halanaerobium sp. 'sapolanicus'] Length = 442 Score = 35.4 bits (80), Expect = 3.9, Method: Composition-based stats. Identities = 25/168 (14%), Positives = 55/168 (32%), Gaps = 14/168 (8%) Query: 14 GANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ-FSPLHPLLDWLHY 72 G N+ + L +ID+ LL+ + R + T+ D ++ + L + Sbjct: 203 GQNVNSYGNDLAEEIDFPLLLEELNKVDSLARIRFMTSHPRDFSEKLLLAIKNLEKVAKH 262 Query: 73 NGFQVVAKVAKEFTENCGRKRVKSSMDV--ELAVDAFEQSEGLEHLVIFSG--DGCFTTL 128 + + K E + +D E+ E + + +V F G D F Sbjct: 263 IHLPIQSGSNKILKEMNRGYSREYYIDTVKEIQNKMPEAAISTDFIVGFPGESDEDFEQT 322 Query: 129 VAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176 + ++ + + + S S R + E+ ++ Sbjct: 323 LKLVKEL-RFDMAYTFIYSPRSGTPAAKRE--------DQIAEEVKKE 361 >gi|328947706|ref|YP_004365043.1| glycoside hydrolase family 3 domain protein [Treponema succinifaciens DSM 2489] gi|328448030|gb|AEB13746.1| glycoside hydrolase family 3 domain protein [Treponema succinifaciens DSM 2489] Length = 561 Score = 35.0 bits (79), Expect = 4.1, Method: Composition-based stats. Identities = 12/64 (18%), Positives = 24/64 (37%) Query: 85 FTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVST 144 F + K S+ D A ++ + ++I D + L+ K+V I+S Sbjct: 454 FHFSYELKNDNSNFDNWNAASLVSVADSYDTIIICVYDKHTANIAKRLRYMDKRVVILSI 513 Query: 145 VLSD 148 + Sbjct: 514 MSPV 517 >gi|322795286|gb|EFZ18091.1| hypothetical protein SINV_04947 [Solenopsis invicta] Length = 393 Score = 35.0 bits (79), Expect = 4.1, Method: Composition-based stats. Identities = 18/134 (13%), Positives = 43/134 (32%), Gaps = 9/134 (6%) Query: 11 FIDG----ANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 FID N +Y KL + + + +I T + + + Sbjct: 96 FIDTGQRPQNFIRDVGLADRFEEYPKLRELIKLKDDLI---AETATPPMYLKTDLLSYNM 152 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVK-SSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 + ++ +E+ CG V+ + D + +D E + + ++ G Sbjct: 153 KELNCKFDVILIEPPLEEYQRTCGATNVQLWNWDQIMELDIGEVAANRSFVFLWCGSSDG 212 Query: 126 TTLVAA-LQRKVKK 138 + L++ + Sbjct: 213 LDMGRFCLRKWGFR 226 >gi|325122448|gb|ADY81971.1| 2,4-dienoyl-CoA reductase [Acinetobacter calcoaceticus PHEA-2] Length = 690 Score = 35.0 bits (79), Expect = 4.2, Method: Composition-based stats. Identities = 18/91 (19%), Positives = 35/91 (38%), Gaps = 4/91 (4%) Query: 69 WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTL 128 W+H G + + K F K + + +D ++H+VI +G FT + Sbjct: 596 WIHRTG--LKNRQVKMFAGVQYDKVDDQGL--HITIDGKPSVLEVDHVVICAGQESFTAM 651 Query: 129 VAALQRKVKKVTIVSTVLSDPSMASDQLRRQ 159 L+ K V ++ + + + RQ Sbjct: 652 YDQLKTDGKNVHLIGGAKEAGELDAKRAIRQ 682 >gi|117928955|ref|YP_873506.1| hypothetical protein Acel_1748 [Acidothermus cellulolyticus 11B] gi|117649418|gb|ABK53520.1| hypothetical protein Acel_1748 [Acidothermus cellulolyticus 11B] Length = 284 Score = 35.0 bits (79), Expect = 4.2, Method: Composition-based stats. Identities = 30/191 (15%), Positives = 61/191 (31%), Gaps = 35/191 (18%) Query: 11 FIDGANL-----YASSKALGF---DIDYRKLLKAFRSR------AIVIRAYYYTTVVGDP 56 +DG L + ++ G +DY LL A R + ++ Sbjct: 2 LVDGGYLLGECAWRAAGRYGRSAIRVDYDMLLTAIADRVESFGAGELATVVWFDAAP--- 58 Query: 57 EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAV--DAFEQSEG-- 112 P L G ++ GR + VELA+ + S Sbjct: 59 --DAKPTPELERIAALEGVELRL----------GRLAGRRRRGVELAIYREMLALSRNPE 106 Query: 113 LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY--LK 170 ++ +V+ +G+ + +++ K++ + +R AD + L + L Sbjct: 107 IDTIVLVAGNAELAIPIGDVRQLGKRIIVAQPGWDSDDEDVAAVRDAADETVVLPWPLLA 166 Query: 171 NEIARDPDEDK 181 + I E + Sbjct: 167 DAIELPAAELR 177 >gi|288939863|ref|YP_003442103.1| hypothetical protein Alvin_0101 [Allochromatium vinosum DSM 180] gi|288895235|gb|ADC61071.1| hypothetical protein Alvin_0101 [Allochromatium vinosum DSM 180] Length = 330 Score = 35.0 bits (79), Expect = 4.5, Method: Composition-based stats. Identities = 23/154 (14%), Positives = 51/154 (33%), Gaps = 19/154 (12%) Query: 2 FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 P +AL+IDG N + LL + R + + V+ + + Sbjct: 67 LQPPRSVALYIDGDNQSPAIAH--------DLLASVRHDWGLEVSRV---VLAGNDHGHT 115 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDV--ELAVDAFEQSEGLEHLVIF 119 L + + + RK + + V EL + + +G + +V+ Sbjct: 116 VPRWLTALANEAVHEDRILALRV-----QRKPEAADLAVILELGANMEQHRQGPDLVVVV 170 Query: 120 SGDGCFTTLVAALQRKVKKVTI-VSTVLSDPSMA 152 S D A++ + +V + + + + Sbjct: 171 SRDEWLIGAAEAVRARGCRVWVAYAENEAVAAHT 204 >gi|314979678|gb|EFT23772.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL072PA2] Length = 497 Score = 35.0 bits (79), Expect = 4.6, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 37/106 (34%), Gaps = 15/106 (14%) Query: 61 SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120 S L LL + G++ + K ++ MDV DA LEH Sbjct: 78 SRLQMLLRGQNLRGYRHYNDEVV---DKFVEKSAENGMDVFRVFDALNDPRNLEH----- 129 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166 +AA+++ K + P + +QAD +D+ Sbjct: 130 -------AMAAVKKTGKHAQGTICYTTSPIHTPESFVKQADRLIDM 168 >gi|307215508|gb|EFN90160.1| Methyltransferase-like protein KIAA1627-like protein [Harpegnathos saltator] Length = 902 Score = 35.0 bits (79), Expect = 4.6, Method: Composition-based stats. Identities = 19/134 (14%), Positives = 43/134 (32%), Gaps = 9/134 (6%) Query: 11 FIDG----ANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66 FID N +Y KL + + + +I T + + L Sbjct: 605 FIDTGQRPQNFIRDVGLADRFEEYPKLRELIKLKDDLI---AETATPPMYLKTDLLSYNL 661 Query: 67 LDWLHYNGFQVVAKVAKEFTENCGRKRVK-SSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125 + ++ +E+ CG V+ + D + +D E + + ++ G Sbjct: 662 KELNCKFDVILIEPPLEEYQRTCGATNVQLWNWDQIMELDIGEVAANRSFVFLWCGSSDG 721 Query: 126 TTLVAA-LQRKVKK 138 + L++ + Sbjct: 722 LDMGRFCLRKWGFR 735 >gi|255537065|ref|XP_002509599.1| nucleic acid binding protein, putative [Ricinus communis] gi|223549498|gb|EEF50986.1| nucleic acid binding protein, putative [Ricinus communis] Length = 294 Score = 34.6 bits (78), Expect = 5.5, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 32/84 (38%), Gaps = 11/84 (13%) Query: 97 SMDVEL---AVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMAS 153 + DV L VD + E LV+ S D F ++ + + K +V + Sbjct: 138 AADVALREHIVDMMD-KRRAECLVLVSDDSDFVGVLKEAKLRCVKTVVVGDINDG----- 191 Query: 154 DQLRRQAD-YFMDLAYLKNEIARD 176 L+R AD F L + ++ Sbjct: 192 -ALKRVADAEFSWQEILMGKAKKE 214 >gi|311279712|ref|YP_003941943.1| ATP-dependent helicase HrpA [Enterobacter cloacae SCF1] gi|308748907|gb|ADO48659.1| ATP-dependent helicase HrpA [Enterobacter cloacae SCF1] Length = 1300 Score = 34.6 bits (78), Expect = 5.6, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 41/120 (34%), Gaps = 4/120 (3%) Query: 22 KALGFDIDYRKLLKAFRSRAIV-IRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAK 80 ++L D L + R + I T + F+ + +V + Sbjct: 202 RSLNIDFLLGYLKELLPRRPDLKIIITSATIDPQRFSRHFNNAPVIEVSGRTYPVEVRYR 261 Query: 81 VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVT 140 E ++ R ++++ D AVD + L+ SG+ AL ++ + T Sbjct: 262 PIVEDADDTERDQLQAIFD---AVDELNHEGPGDILIFMSGEREIRDTADALNKRDMRHT 318 >gi|56696704|ref|YP_167065.1| isochorismatase family protein [Ruegeria pomeroyi DSS-3] gi|56678441|gb|AAV95107.1| isochorismatase family protein [Ruegeria pomeroyi DSS-3] Length = 213 Score = 34.6 bits (78), Expect = 5.7, Method: Composition-based stats. Identities = 25/171 (14%), Positives = 52/171 (30%), Gaps = 27/171 (15%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 P + LFID N S+ G + D + +Y + + Sbjct: 11 PAQSALLFIDVQNF--SAHRKGAEFDGLDPAEFDAKYG------WYFDQLDSRVIP--NM 60 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTEN----------CGRKRVKSSMDVELAVDAFEQSEGL 113 + G +V+ + T + G K S D +D + + Sbjct: 61 QAVQAACRAAGVEVMYTTIESLTLDGRDRSLDYKITGFNVPKGSWD-GKVID--QIAPEG 117 Query: 114 EHLVIFSGDGCF---TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161 + +V+ G T + L+ + ++S +++ +R D Sbjct: 118 DEIVLPKGSSSVFVSTHIDYVLRNLGVRQLVISGLIT-DQCVESAIRDACD 167 >gi|145631705|ref|ZP_01787467.1| hypothetical protein CGSHi22421_00912 [Haemophilus influenzae R3021] gi|144982648|gb|EDJ90190.1| hypothetical protein CGSHi22421_00912 [Haemophilus influenzae R3021] Length = 106 Score = 34.6 bits (78), Expect = 5.7, Method: Composition-based stats. Identities = 5/40 (12%), Positives = 15/40 (37%) Query: 102 LAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTI 141 + + + ++ +V+ +GD F + K + Sbjct: 1 MDITILSYEKLVDVIVLIAGDSDFVPAAKQARIKGVDFIL 40 >gi|268608404|ref|ZP_06142131.1| hexosyltransferase [Ruminococcus flavefaciens FD-1] Length = 389 Score = 34.6 bits (78), Expect = 5.8, Method: Composition-based stats. Identities = 28/173 (16%), Positives = 55/173 (31%), Gaps = 20/173 (11%) Query: 5 REKIALFIDGANLYASSKALGFDIDYRKLL-KAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 ++IAL N + G Y +L+ + + V + ++ Sbjct: 1 MKRIALV----NQRYGMEVNGGSEYYTRLIAERLAEKYQVDVITTKALDYTTWDNHYTAD 56 Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123 ++ +H F V AK+F E G+ +D E E + G Sbjct: 57 EEDINGVHVLRFNVDKPRAKDFNEFNGKYLTSGKLDTE-----------TEKIWFEKQ-G 104 Query: 124 CFTT-LVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY--FMDLAYLKNEI 173 + + ++ K + V + + L AD F+ A+ + I Sbjct: 105 PYCPDAIRYIRENHDKYDVFIFVTYLYYLTVNGLPEAADKAVFIPTAHEEPFI 157 >gi|210611270|ref|ZP_03288825.1| hypothetical protein CLONEX_01015 [Clostridium nexile DSM 1787] gi|210152034|gb|EEA83041.1| hypothetical protein CLONEX_01015 [Clostridium nexile DSM 1787] Length = 490 Score = 34.6 bits (78), Expect = 6.0, Method: Composition-based stats. Identities = 24/168 (14%), Positives = 53/168 (31%), Gaps = 24/168 (14%) Query: 3 DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62 + EK+ + +D N D KL R+ + ++ D S Sbjct: 267 ESSEKVVIVVDCEN-----------SDPYKLCATLRNLDRQYTKKISSIILFDDVHAASA 315 Query: 63 LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA--FEQSEGLEHLVIFS 120 L + ++ + K+ KS +DV L ++ ++ S Sbjct: 316 WRILESFTAIPVEHMMIERVKQ---------NKSLVDVMLISRTCQEHYKNNVDSFILVS 366 Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168 D + L+++LQ + ++ S + L ++ + Sbjct: 367 SDSDYWGLISSLQDA--RFLVMIERESCGPDLKNALSDAGIFYCYIDD 412 >gi|229825138|ref|ZP_04451207.1| hypothetical protein GCWU000182_00489 [Abiotrophia defectiva ATCC 49176] gi|229790510|gb|EEP26624.1| hypothetical protein GCWU000182_00489 [Abiotrophia defectiva ATCC 49176] Length = 301 Score = 34.6 bits (78), Expect = 6.1, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 49/139 (35%), Gaps = 15/139 (10%) Query: 33 LLKAFRSRAIVIRAYY--YTTVVGDPEQQFSPLHPLLDWLHYNG--FQVVAKVAKEFTEN 88 L+ +++ V+ Y + V + + L+ +L G + K E + Sbjct: 140 LMTDLKNKGSVLYLDMEPYNSRVVNGYGNPKGMSELIYYLKQGGEKLKWKFKTLIEKEDV 199 Query: 89 CGRK---------RVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKV 139 GR + DV+ +D ++ + ++I G T L + K + Sbjct: 200 SGRILPVSCPLDLSELTGEDVKELLDIVQRLNEYDFILINLGL--LTPATFELMKAGKHI 257 Query: 140 TIVSTVLSDPSMASDQLRR 158 IV T + +++ L Sbjct: 258 EIVVTRKNGDRESAENLIN 276 >gi|109896470|ref|YP_659725.1| HAD family hydrolase [Pseudoalteromonas atlantica T6c] gi|109698751|gb|ABG38671.1| HAD-superfamily hydrolase, subfamily IA, variant 3 [Pseudoalteromonas atlantica T6c] Length = 227 Score = 34.6 bits (78), Expect = 6.1, Method: Composition-based stats. Identities = 13/95 (13%), Positives = 31/95 (32%), Gaps = 3/95 (3%) Query: 49 YTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE 108 + E + G + + ++ + D +L +D + Sbjct: 24 HYDSHFWLEHLPKKYAGIKGISEEQGKEYMMAEYRQVFGTIDWYCLDYWAD-KLQLDIMQ 82 Query: 109 QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS 143 +EH + S L+ AL+ ++V +V+ Sbjct: 83 AKREVEH--LISMRDDTIPLLDALRESGREVILVT 115 >gi|298528011|ref|ZP_07015415.1| conserved hypothetical protein [Desulfonatronospira thiodismutans ASO3-1] gi|298511663|gb|EFI35565.1| conserved hypothetical protein [Desulfonatronospira thiodismutans ASO3-1] Length = 212 Score = 34.6 bits (78), Expect = 6.2, Method: Composition-based stats. Identities = 10/67 (14%), Positives = 29/67 (43%), Gaps = 7/67 (10%) Query: 100 VELAVDAFEQSEGL--EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLR 157 V++A+D + + V+ + + ++++ ++ + + + S +L Sbjct: 142 VKMALDMTTLAARKAGDMFVLITDRSDLVPAMEMVRQEGVQICL----DNMHAPVSSELS 197 Query: 158 RQADYFM 164 QAD F+ Sbjct: 198 EQAD-FI 203 >gi|91793924|ref|YP_563575.1| NAD(+) kinase [Shewanella denitrificans OS217] gi|123356621|sp|Q12L24|PPNK_SHEDO RecName: Full=Probable inorganic polyphosphate/ATP-NAD kinase; Short=Poly(P)/ATP NAD kinase gi|91715926|gb|ABE55852.1| NAD(+) kinase [Shewanella denitrificans OS217] Length = 309 Score = 34.6 bits (78), Expect = 6.2, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 15/40 (37%) Query: 103 AVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIV 142 AVD E E + ++ GDG L R V V Sbjct: 70 AVDLVEIGERCDLAIVVGGDGNMLGAARVLARYDVAVIGV 109 >gi|255566227|ref|XP_002524101.1| calcium-dependent protein kinase, putative [Ricinus communis] gi|223536669|gb|EEF38311.1| calcium-dependent protein kinase, putative [Ricinus communis] Length = 584 Score = 34.6 bits (78), Expect = 6.3, Method: Composition-based stats. Identities = 12/82 (14%), Positives = 32/82 (39%), Gaps = 10/82 (12%) Query: 104 VDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS-----TVLSDPSMASDQLRR 158 +D+ Q+ +++ G F + L + K+ + + + D+L++ Sbjct: 479 IDSLMQAADIDNSGTIDY-GEFIAAMLHLNKIDKEDHLFAAFSYFDKDGSGYITQDELQQ 537 Query: 159 QADYF----MDLAYLKNEIARD 176 D F + + + E+ +D Sbjct: 538 ACDQFGLGDIHIEDIIREVDQD 559 >gi|194771122|ref|XP_001967623.1| GF19970 [Drosophila ananassae] gi|190614490|gb|EDV30014.1| GF19970 [Drosophila ananassae] Length = 121 Score = 34.6 bits (78), Expect = 6.4, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 31/90 (34%), Gaps = 1/90 (1%) Query: 11 FIDGANL-YASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDW 69 FID +L Y LG +D+R ++ + I+I ++ P + ++ Sbjct: 11 FIDVGSLTYGGISGLGEKMDHRVIMAHTTVQCILIPRFWLFEAAESPGNIWQRQRFYIEC 70 Query: 70 LHYNGFQVVAKVAKEFTENCGRKRVKSSMD 99 + F+ K K + D Sbjct: 71 TREDLFKDFLKTRKWEKFRHDYIESILNAD 100 >gi|312078871|ref|XP_003141928.1| hypothetical protein LOAG_06341 [Loa loa] gi|307762909|gb|EFO22143.1| hypothetical protein LOAG_06341 [Loa loa] Length = 577 Score = 34.6 bits (78), Expect = 6.5, Method: Composition-based stats. Identities = 16/166 (9%), Positives = 40/166 (24%), Gaps = 17/166 (10%) Query: 21 SKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAK 80 KA +IDY+ + + R S L + + Sbjct: 210 LKAYKTEIDYQTIRDEYMKRYS---TSLNAAEHQRLFMNKSALKNFWRVFYREIILINDC 266 Query: 81 VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVT 140 + N + + D ++ + + + + + K + V Sbjct: 267 PIRVRLRNPNIQIPEE------ITDDLHLLANIDKIELPTFALECRPSASNVVDKGRAVE 320 Query: 141 IVSTVLSDPSMASD--------QLRRQADYFMDLAYLKNEIARDPD 178 V S +++ D ++ + +I Sbjct: 321 YPGVVAVLNGSTSKKPTMSLLEEVKEDYDRLLNSEKQREDIKNADR 366 >gi|225403120|ref|ZP_03760417.1| hypothetical protein CLOSTASPAR_04448 [Clostridium asparagiforme DSM 15981] gi|225043238|gb|EEG53484.1| hypothetical protein CLOSTASPAR_04448 [Clostridium asparagiforme DSM 15981] Length = 253 Score = 34.6 bits (78), Expect = 6.5, Method: Composition-based stats. Identities = 13/53 (24%), Positives = 24/53 (45%), Gaps = 5/53 (9%) Query: 77 VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLE-----HLVIFSGDGC 124 VVA AK + G K+ V++ +DA E + ++ +++ S D Sbjct: 126 VVAIDAKRRPDGSGWNIYKNGGRVDMGIDALEWARTVDRLGAGEILLTSMDCD 178 >gi|257070264|ref|YP_003156519.1| hypothetical protein Bfae_31700 [Brachybacterium faecium DSM 4810] gi|256561082|gb|ACU86929.1| hypothetical protein Bfae_31700 [Brachybacterium faecium DSM 4810] Length = 182 Score = 34.6 bits (78), Expect = 6.8, Method: Composition-based stats. Identities = 26/180 (14%), Positives = 50/180 (27%), Gaps = 31/180 (17%) Query: 10 LFIDGANLYASSK--------ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61 L +DG N+ A+ + KLL + + V D Sbjct: 8 LLVDGENIDATLGVSVLGRRPHPEERPRWNKLLHHAETSWQQPVTALFFLAVEDSLPSA- 66 Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121 + L G++ V + +D+ + A +++ S Sbjct: 67 ----FVQALLAMGYKAVPL-----------RGEGKIVDIAIQRTAEALQSREADVMLVSH 111 Query: 122 DGCFTTLVAALQ-RKVKKVTIVSTVLSDPSMASDQLRRQA-DYFMDLA-YLKNEIARDPD 178 D F + L ++ I+ + L+ F DL + +R P Sbjct: 112 DKDFVPQMEDLAGTVDRRTAIIGF----REFMAADLQEIPGIEFHDLEYDVAAFTSRLPR 167 >gi|256374792|ref|YP_003098452.1| hydrolase, TatD family [Actinosynnema mirum DSM 43827] gi|255919095|gb|ACU34606.1| hydrolase, TatD family [Actinosynnema mirum DSM 43827] Length = 256 Score = 34.2 bits (77), Expect = 7.2, Method: Composition-based stats. Identities = 23/115 (20%), Positives = 36/115 (31%), Gaps = 8/115 (6%) Query: 46 AYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVD 105 A VG+ + + D F+ ++AK + + DV A+D Sbjct: 84 ARPRVVAVGETGLDYYWDYAPRDAQQEA-FRWHIELAKRVGKPLMIHDRDAHADVLAALD 142 Query: 106 AFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160 A E + FSGD F + ++S S LR A Sbjct: 143 A-EGAPEKVVFHCFSGDLDFARACVE------RGFVLSFAGPVTFRNSSALREAA 190 >gi|119719251|ref|YP_919746.1| bis(5'nucleosyl)-tetraphosphatase, ApaH [Thermofilum pendens Hrk 5] gi|119524371|gb|ABL77743.1| bis(5'nucleosyl)-tetraphosphatase, ApaH [Thermofilum pendens Hrk 5] Length = 281 Score = 34.2 bits (77), Expect = 7.9, Method: Composition-based stats. Identities = 9/38 (23%), Positives = 14/38 (36%) Query: 135 KVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172 K K+V V D + R AD ++ L + Sbjct: 44 KGKRVLFVGDTHGDVESTINAFREAADVYVFLGDYVDR 81 >gi|119503370|ref|ZP_01625454.1| Outer membrane protein [marine gamma proteobacterium HTCC2080] gi|119461016|gb|EAW42107.1| Outer membrane protein [marine gamma proteobacterium HTCC2080] Length = 758 Score = 34.2 bits (77), Expect = 8.0, Method: Composition-based stats. Identities = 18/147 (12%), Positives = 43/147 (29%), Gaps = 22/147 (14%) Query: 4 PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63 K+ +F+DG + ++ AL D + + ++ V ++ Sbjct: 107 NDPKVGVFVDGIYVGYNAGALSSTFDLEAVEVLRGPQGTLLGRNVTGGAVLVKSKRPGNE 166 Query: 64 HPLLDWLH---------------YNGFQVVAKVAKEFTENCGRKRVKSS--MDVELAVDA 106 + G V KVA + G + +D+ + D Sbjct: 167 FGFNAEVSVGNYGTTEFNASVEGPLGKNVFGKVAFVKMDRDGYFEDNNGGSIDLNIYPDG 226 Query: 107 FEQSEGLEHLVIFSGDGCFTTLVAALQ 133 ++ + + + T + L+ Sbjct: 227 MPDTDTGDKVGM-----DLTIVRPMLR 248 >gi|300916253|ref|ZP_07133002.1| ATP-dependent helicase HrpA [Escherichia coli MS 115-1] gi|300416435|gb|EFJ99745.1| ATP-dependent helicase HrpA [Escherichia coli MS 115-1] Length = 1300 Score = 34.2 bits (77), Expect = 8.1, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 41/120 (34%), Gaps = 4/120 (3%) Query: 22 KALGFDIDYRKLLKAFRSRAIV-IRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAK 80 ++L D L + R + I T + ++ + +V + Sbjct: 202 RSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHYNNAPIIEVSGRTYPVEVRYR 261 Query: 81 VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVT 140 E ++ R ++++ D AVD Q + L+ SG+ AL + + T Sbjct: 262 PIVEEADDTERDQLQAIFD---AVDELSQESPGDILIFMSGEREIRDTADALNKLNLRHT 318 >gi|291085305|ref|ZP_06352694.2| YcjR protein [Citrobacter youngae ATCC 29220] gi|291071559|gb|EFE09668.1| YcjR protein [Citrobacter youngae ATCC 29220] Length = 265 Score = 34.2 bits (77), Expect = 8.1, Method: Composition-based stats. Identities = 14/135 (10%), Positives = 32/135 (23%), Gaps = 4/135 (2%) Query: 29 DYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTEN 88 D + + + V + + + L + K + + Sbjct: 124 DRKAVSDSLIYLDKVAERTGTVVYLEPLNRYQDHMINTLADARRYIVENNLKHVQIIGDF 183 Query: 89 CGRKRVKSSMDVELA--VDAFEQSEGLEHLVI--FSGDGCFTTLVAALQRKVKKVTIVST 144 + M L D ++ SG F+ L L+ + +V Sbjct: 184 YHMNIEEDDMAQALHDNRDLLGHVHIADNHRYQPGSGTLDFSALFDQLREDNYQGYVVYE 243 Query: 145 VLSDPSMASDQLRRQ 159 + R+ Sbjct: 244 GRVRAENLPEAYRQS 258 >gi|167756068|ref|ZP_02428195.1| hypothetical protein CLORAM_01588 [Clostridium ramosum DSM 1402] gi|237734054|ref|ZP_04564535.1| carbamoyl-phosphate synthase large subunit [Mollicutes bacterium D7] gi|167704060|gb|EDS18639.1| hypothetical protein CLORAM_01588 [Clostridium ramosum DSM 1402] gi|229382880|gb|EEO32971.1| carbamoyl-phosphate synthase large subunit [Coprobacillus sp. D7] Length = 1065 Score = 34.2 bits (77), Expect = 8.3, Method: Composition-based stats. Identities = 11/72 (15%), Positives = 23/72 (31%), Gaps = 2/72 (2%) Query: 110 SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169 E +E + SGD +++ +K + T ++ L F+ Sbjct: 771 MEHVERAGVHSGDSISVYPTQKIKQHIKDTIVEYTGRLAKALNVIGLINI--QFIVYEDQ 828 Query: 170 KNEIARDPDEDK 181 I +P + Sbjct: 829 VYVIEVNPRSSR 840 >gi|158424514|ref|YP_001525806.1| serine/threonine protein kinase [Azorhizobium caulinodans ORS 571] gi|158331403|dbj|BAF88888.1| putative serine/threonine protein kinase [Azorhizobium caulinodans ORS 571] Length = 367 Score = 34.2 bits (77), Expect = 8.4, Method: Composition-based stats. Identities = 22/162 (13%), Positives = 50/162 (30%), Gaps = 31/162 (19%) Query: 15 ANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHY-- 72 N + + +D+ +L F R+ + R Y + + + + L Sbjct: 142 QNWLRGADGEAWLMDF-QLAMPFSRRSKIGRVLAYEDLRHLLKHKRTYCPEALTARERTM 200 Query: 73 ----------------NGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHL 116 ++ V + +++ GR + + +A DA + + + Sbjct: 201 LATKSLPTRIWMATGKRVYRFVTRNLMSYSDTEGRGPRVTQVAPRIA-DALKAHPAVADV 259 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRR 158 + F Q KV + + V M ++ LR Sbjct: 260 HM----ADF-------QTLGGKVGLYAFVEPKAPMTAEALRE 290 >gi|257052060|ref|YP_003129893.1| nicotinate phosphoribosyltransferase [Halorhabdus utahensis DSM 12940] gi|256690823|gb|ACV11160.1| Quinolinate phosphoribosyl transferase [Halorhabdus utahensis DSM 12940] Length = 388 Score = 34.2 bits (77), Expect = 8.8, Method: Composition-based stats. Identities = 15/74 (20%), Positives = 27/74 (36%), Gaps = 7/74 (9%) Query: 97 SMDVELAVDAFEQSEGLEHLVI---FSGDGCFTTLVAALQ----RKVKKVTIVSTVLSDP 149 S +V+ A+ A E L+ + + S G F +V ++ + + Sbjct: 215 SDEVDEAIRAVEAVPDLDSIRLDTTSSRRGDFRRIVQEVRWELDARGHDDVGIFLSGGLD 274 Query: 150 SMASDQLRRQADYF 163 +LR AD F Sbjct: 275 PTTLRELRDVADGF 288 >gi|268317081|ref|YP_003290800.1| ATP-NAD/AcoX kinase [Rhodothermus marinus DSM 4252] gi|262334615|gb|ACY48412.1| ATP-NAD/AcoX kinase [Rhodothermus marinus DSM 4252] Length = 290 Score = 33.8 bits (76), Expect = 9.7, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 32/86 (37%), Gaps = 3/86 (3%) Query: 57 EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHL 116 EQ + P+ L+ W+ G +V R S D A+ A + + ++ L Sbjct: 12 EQLWKPVGELIRWMARQGLEVRLHPDVAR---GLVARGLLSDDEAAALTAHDLAAEVDLL 68 Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIV 142 + F GDG R+ V V Sbjct: 69 LSFGGDGTLLQSAHLAGRRGTPVLGV 94 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.311 0.138 0.374 Lambda K H 0.267 0.0428 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,497,378,442 Number of Sequences: 14124377 Number of extensions: 49367560 Number of successful extensions: 206978 Number of sequences better than 10.0: 1684 Number of HSP's better than 10.0 without gapping: 1202 Number of HSP's successfully gapped in prelim test: 482 Number of HSP's that attempted gapping in prelim test: 202673 Number of HSP's gapped (non-prelim): 1750 length of query: 182 length of database: 4,842,793,630 effective HSP length: 130 effective length of query: 52 effective length of database: 3,006,624,620 effective search space: 156344480240 effective search space used: 156344480240 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 77 (34.2 bits)