BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780936|ref|YP_003065349.1| hypothetical protein
CLIBASIA_04175 [Candidatus Liberibacter asiaticus str. psy62]
         (182 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done



>gi|254477746|ref|ZP_05091132.1| DUF88 [Ruegeria sp. R11]
 gi|214031989|gb|EEB72824.1| DUF88 [Ruegeria sp. R11]
          Length = 189

 Score =  211 bits (536), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 96/182 (52%), Positives = 137/182 (75%), Gaps = 2/182 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MF   E++ALFIDG+NLYA++KALGFDIDY+ L + F  R  ++RA+YYT ++ +   ++
Sbjct: 1   MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLEN--DEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E +  ++H+V+FS
Sbjct: 59  SPIRPLVDWLHYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F  LV +LQR+  +V++VST+ S P M SD+LRRQAD F++L  LK+ I R P E 
Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELEELKDVIGRPPREQ 178

Query: 181 KK 182
            +
Sbjct: 179 GE 180


>gi|163738230|ref|ZP_02145646.1| hypothetical protein RGBS107_07449 [Phaeobacter gallaeciensis
           BS107]
 gi|163740168|ref|ZP_02147562.1| hypothetical protein RG210_08712 [Phaeobacter gallaeciensis 2.10]
 gi|161386026|gb|EDQ10401.1| hypothetical protein RG210_08712 [Phaeobacter gallaeciensis 2.10]
 gi|161388846|gb|EDQ13199.1| hypothetical protein RGBS107_07449 [Phaeobacter gallaeciensis
           BS107]
          Length = 189

 Score =  208 bits (530), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 96/180 (53%), Positives = 137/180 (76%), Gaps = 2/180 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MF   E++ALFIDG+NLYA++KALGFDIDY+ L + F  R  ++RA+YYT ++ +   ++
Sbjct: 1   MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLEN--DEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E +  ++H+V+FS
Sbjct: 59  SPIRPLVDWLHYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F  L+A+LQR+  +V++VST+ S P M SD+LRRQAD F++L  LK+ I R P E 
Sbjct: 119 GDGDFRPLIASLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELEELKDVIGRPPREQ 178


>gi|99082408|ref|YP_614562.1| hypothetical protein TM1040_2568 [Ruegeria sp. TM1040]
 gi|99038688|gb|ABF65300.1| protein of unknown function DUF88 [Ruegeria sp. TM1040]
          Length = 189

 Score =  208 bits (529), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 96/179 (53%), Positives = 137/179 (76%), Gaps = 2/179 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MF   E++ALFIDG+NLYAS+KALGFDIDY+ L + F  R  ++RA+YYT ++ +   ++
Sbjct: 1   MFYKDERLALFIDGSNLYASAKALGFDIDYKLLRQEFMRRGKLVRAFYYTALLEN--DEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E +  ++H+V+FS
Sbjct: 59  SPIRPLVDWLHYNGFSMVTKPAKEYTDSMGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
           GDG F  L+A+LQR+  +V++VST+ S P M SD+LRRQAD F++L  L++ I R P E
Sbjct: 119 GDGDFRPLIASLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELEELRDVIGRPPRE 177


>gi|254511909|ref|ZP_05123976.1| hypothetical protein RKLH11_2451 [Rhodobacteraceae bacterium KLH11]
 gi|221535620|gb|EEE38608.1| hypothetical protein RKLH11_2451 [Rhodobacteraceae bacterium KLH11]
          Length = 191

 Score =  207 bits (528), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 95/179 (53%), Positives = 137/179 (76%), Gaps = 2/179 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MF   E++ALFIDG+NLYA++KALGFDIDY+ L + F  R  ++RA+YYT ++ +   ++
Sbjct: 1   MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLEN--DEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E +  ++H+V+FS
Sbjct: 59  SPIRPLVDWLHYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
           GDG F  L+A+LQR+  +V++VST+ S P M SD+LRRQAD F++L  L++ I R P E
Sbjct: 119 GDGDFRPLIASLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELEDLRDVIGRPPRE 177


>gi|77462212|ref|YP_351716.1| hypothetical protein RSP_1667 [Rhodobacter sphaeroides 2.4.1]
 gi|126461074|ref|YP_001042188.1| hypothetical protein Rsph17029_0300 [Rhodobacter sphaeroides ATCC
           17029]
 gi|221641166|ref|YP_002527428.1| hypothetical protein RSKD131_3067 [Rhodobacter sphaeroides KD131]
 gi|332560093|ref|ZP_08414415.1| hypothetical protein RSWS8N_13570 [Rhodobacter sphaeroides WS8N]
 gi|77386630|gb|ABA77815.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1]
 gi|126102738|gb|ABN75416.1| protein of unknown function DUF88 [Rhodobacter sphaeroides ATCC
           17029]
 gi|221161947|gb|ACM02927.1| Hypothetical Protein RSKD131_3067 [Rhodobacter sphaeroides KD131]
 gi|332277805|gb|EGJ23120.1| hypothetical protein RSWS8N_13570 [Rhodobacter sphaeroides WS8N]
          Length = 190

 Score =  207 bits (528), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 94/181 (51%), Positives = 135/181 (74%), Gaps = 2/181 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MF   E++ALFIDG+NLYA++KALGFDIDY+ L + F  R  ++RA+YYT ++ +    +
Sbjct: 1   MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLEN--DDY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E +  ++H+V+FS
Sbjct: 59  SPIRPLVDWLHYNGFTMVTKPAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F  LV +LQR+  +V++VST+ S P M +D+LRRQAD F++L  L+  I R P E 
Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMIADELRRQADNFIELDELREVIGRPPREP 178

Query: 181 K 181
           +
Sbjct: 179 R 179


>gi|260428353|ref|ZP_05782332.1| RtsE [Citreicella sp. SE45]
 gi|260422845|gb|EEX16096.1| RtsE [Citreicella sp. SE45]
          Length = 191

 Score =  207 bits (528), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 94/181 (51%), Positives = 136/181 (75%), Gaps = 2/181 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MF   E++ALFIDG+NLYA++KALGFDIDY+ L + F  R  ++RA+YYT ++ +   ++
Sbjct: 1   MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFVRRGKMVRAFYYTALLEN--DEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E +  ++H+V+FS
Sbjct: 59  SPIRPLVDWLHYNGFTMVTKPAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F  LV +LQR+  +V++VST+ S P M +D+LRRQAD F++L  L+  I R P E 
Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMIADELRRQADNFIELDELREVIGRPPREQ 178

Query: 181 K 181
           +
Sbjct: 179 Q 179


>gi|126728513|ref|ZP_01744329.1| hypothetical protein SSE37_21022 [Sagittula stellata E-37]
 gi|126711478|gb|EBA10528.1| hypothetical protein SSE37_21022 [Sagittula stellata E-37]
          Length = 195

 Score =  207 bits (528), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 94/181 (51%), Positives = 136/181 (75%), Gaps = 2/181 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MF   E++ALFIDG+NLYA++KALGFDIDY+ L + F  R  ++RA+YYT ++ +   ++
Sbjct: 6   MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFARRGKMVRAFYYTALLEN--DEY 63

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E +  ++H+V+FS
Sbjct: 64  SPIRPLVDWLHYNGFTMVTKPAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 123

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F  LV +LQR+  +V++VST+ S P M +D+LRRQAD F++L  L+  I R P E 
Sbjct: 124 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMIADELRRQADNFIELDELREVIGRPPREQ 183

Query: 181 K 181
           +
Sbjct: 184 Q 184


>gi|146278613|ref|YP_001168772.1| hypothetical protein Rsph17025_2579 [Rhodobacter sphaeroides ATCC
           17025]
 gi|145556854|gb|ABP71467.1| protein of unknown function DUF88 [Rhodobacter sphaeroides ATCC
           17025]
          Length = 190

 Score =  207 bits (528), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 94/181 (51%), Positives = 135/181 (74%), Gaps = 2/181 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MF   E++ALFIDG+NLYA++KALGFDIDY+ L + F  R  ++RA+YYT ++ +    +
Sbjct: 1   MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLEN--DDY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E +  ++H+V+FS
Sbjct: 59  SPIRPLVDWLHYNGFTMVTKPAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F  LV +LQR+  +V++VST+ S P M +D+LRRQAD F++L  L+  I R P E 
Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMIADELRRQADNFIELDELREVIGRPPREP 178

Query: 181 K 181
           +
Sbjct: 179 R 179


>gi|86137266|ref|ZP_01055844.1| hypothetical protein MED193_16367 [Roseobacter sp. MED193]
 gi|85826590|gb|EAQ46787.1| hypothetical protein MED193_16367 [Roseobacter sp. MED193]
          Length = 190

 Score =  207 bits (527), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 97/181 (53%), Positives = 138/181 (76%), Gaps = 2/181 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MF   E++ALFIDG+NLYA++KALGFDIDY+ L + F  R  ++RA+YYT ++ +   ++
Sbjct: 1   MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLEN--DEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+ELAVDA E +  ++H+V+FS
Sbjct: 59  SPIRPLVDWLHYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELAVDAMELAPRVDHIVLFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F  L+A+LQR+  +V++VST+ S P M SD+LRRQAD F++L  LK+ I R P E 
Sbjct: 119 GDGDFRPLIASLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELEELKDVIGRPPREH 178

Query: 181 K 181
            
Sbjct: 179 P 179


>gi|126739732|ref|ZP_01755424.1| hypothetical protein RSK20926_05732 [Roseobacter sp. SK209-2-6]
 gi|126719378|gb|EBA16088.1| hypothetical protein RSK20926_05732 [Roseobacter sp. SK209-2-6]
          Length = 190

 Score =  207 bits (527), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 94/181 (51%), Positives = 138/181 (76%), Gaps = 2/181 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MF   E++ALFIDG+NLYA++K+LGFDIDY+ L + F  R  ++RA+YYT ++ +   ++
Sbjct: 1   MFYKDERLALFIDGSNLYAAAKSLGFDIDYKLLRQEFMRRGKLLRAFYYTALLEN--DEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E +  ++H+V+FS
Sbjct: 59  SPIRPLVDWLHYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F  L+A+LQR+  +V++VST+ S P M SD+LRRQAD F++L  LK+ I R P ++
Sbjct: 119 GDGDFRPLIASLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELEELKDVIGRPPRDN 178

Query: 181 K 181
            
Sbjct: 179 P 179


>gi|84500570|ref|ZP_00998819.1| hypothetical protein OB2597_11446 [Oceanicola batsensis HTCC2597]
 gi|84391523|gb|EAQ03855.1| hypothetical protein OB2597_11446 [Oceanicola batsensis HTCC2597]
          Length = 190

 Score =  207 bits (527), Expect = 5e-52,   Method: Composition-based stats.
 Identities = 94/181 (51%), Positives = 137/181 (75%), Gaps = 2/181 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MF   E++ALFIDG+NLYA++KALGFDIDY+ L + F  R  ++RA+YYT ++ +   ++
Sbjct: 1   MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLEN--DEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E +  ++H+V+FS
Sbjct: 59  SPIRPLVDWLHYNGFTMVTKPAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F  LV +LQR+  +V++VST+ S P M +D+LRRQAD F++L  L++ I R P E 
Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMIADELRRQADNFIELDDLRDVIGRPPRET 178

Query: 181 K 181
           +
Sbjct: 179 Q 179


>gi|294678836|ref|YP_003579451.1| hypothetical protein RCAP_rcc03320 [Rhodobacter capsulatus SB 1003]
 gi|294477656|gb|ADE87044.1| protein of unknown function DUF88 [Rhodobacter capsulatus SB 1003]
          Length = 193

 Score =  207 bits (526), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 95/182 (52%), Positives = 137/182 (75%), Gaps = 2/182 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MF   E++ALFIDG+NLYA++KALGFDIDY+ L + F  R  ++RA+YYT ++ +  +++
Sbjct: 1   MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFERRGKLVRAFYYTALLEN--EEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           SP+ PL+DWLHYNG+ +V K AKE+T++ GR++VK +MD+ELAV+A E +  L+H V+FS
Sbjct: 59  SPIRPLVDWLHYNGYAMVTKPAKEYTDSMGRRKVKGNMDIELAVNAMELAPRLDHAVLFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F  LV ALQR   +V++VST+ S P M +D+LRRQAD F++L  L+  I R P E 
Sbjct: 119 GDGDFRPLVEALQRMGVRVSVVSTIRSQPPMIADELRRQADNFIELDALREVIGRPPREP 178

Query: 181 KK 182
           ++
Sbjct: 179 RE 180


>gi|56698038|ref|YP_168409.1| hypothetical protein SPO3206 [Ruegeria pomeroyi DSS-3]
 gi|56679775|gb|AAV96441.1| conserved hypothetical protein [Ruegeria pomeroyi DSS-3]
          Length = 190

 Score =  207 bits (526), Expect = 6e-52,   Method: Composition-based stats.
 Identities = 96/179 (53%), Positives = 136/179 (75%), Gaps = 2/179 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MF   E++ALFIDG+NLYA++KALGFDIDY+ L + F  R  ++RA+YYT ++ +   ++
Sbjct: 1   MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKMLRAFYYTALLEN--DEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E +  ++H+V+FS
Sbjct: 59  SPIRPLVDWLHYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
           GDG F  LVA+LQR+  +V++VST+ S P M SD+LRRQAD F++L  L+  I R P E
Sbjct: 119 GDGDFRPLVASLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELEELREVIGRPPRE 177


>gi|163733871|ref|ZP_02141313.1| hypothetical protein RLO149_06148 [Roseobacter litoralis Och 149]
 gi|161392982|gb|EDQ17309.1| hypothetical protein RLO149_06148 [Roseobacter litoralis Och 149]
          Length = 182

 Score =  206 bits (524), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 94/179 (52%), Positives = 136/179 (75%), Gaps = 2/179 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MF   E++ALFIDG+NLYA++K+LGFDIDY+ L + F  R  ++RA+YYT ++ +   ++
Sbjct: 1   MFYKDERLALFIDGSNLYAAAKSLGFDIDYKLLRQEFMRRGKLLRAFYYTALLEN--DEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           SP+ PL+DWL+YNGF +V K AKE+T++ GR++VK +MD+ELAVDA E +  ++H+V+FS
Sbjct: 59  SPIRPLVDWLNYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELAVDAMELAPRVDHIVLFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
           GDG F  L+ +LQR   +V++VST+ S P M SD+LRRQAD F++L  LK+ I R P E
Sbjct: 119 GDGDFRPLIESLQRSGVRVSVVSTIRSQPPMISDELRRQADNFIELDELKDVIGRPPRE 177


>gi|110678677|ref|YP_681684.1| hypothetical protein RD1_1356 [Roseobacter denitrificans OCh 114]
 gi|109454793|gb|ABG30998.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114]
          Length = 182

 Score =  205 bits (522), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 93/179 (51%), Positives = 135/179 (75%), Gaps = 2/179 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MF   E++ALFIDG+NLYA++K+LGFDIDY+ L + F  R  ++RA+YYT ++ +   ++
Sbjct: 1   MFYKDERLALFIDGSNLYAAAKSLGFDIDYKLLRQEFMRRGKLLRAFYYTALLEN--DEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           SP+ PL+DWL+YNGF +V K AKE+T++ GR++VK +MD+EL VDA E +  ++H+V+FS
Sbjct: 59  SPIRPLVDWLNYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
           GDG F  L+ +LQR   +V++VST+ S P M SD+LRRQAD F++L  LK+ I R P E
Sbjct: 119 GDGDFRPLIESLQRSGVRVSVVSTIRSQPPMISDELRRQADNFIELDELKDVIGRPPRE 177


>gi|254465558|ref|ZP_05078969.1| hypothetical protein RBY4I_2165 [Rhodobacterales bacterium Y4I]
 gi|206686466|gb|EDZ46948.1| hypothetical protein RBY4I_2165 [Rhodobacterales bacterium Y4I]
          Length = 189

 Score =  205 bits (521), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 95/180 (52%), Positives = 136/180 (75%), Gaps = 2/180 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MF   E++ALFIDG+NLYA++KALGFDIDY+ L + F  R  ++RA+YYT ++ +   ++
Sbjct: 1   MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLEN--DEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E +  ++H+V+FS
Sbjct: 59  SPIRPLVDWLHYNGFTMVTKPAKEYTDSLGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F  L+A+LQR+  +V++VST+ S P M SD LRRQAD F++L  L++ I R P E 
Sbjct: 119 GDGDFRPLIASLQRQGVRVSVVSTIRSQPPMISDDLRRQADNFIELEELRDVIGRPPREQ 178


>gi|259417563|ref|ZP_05741482.1| hypothetical protein SCH4B_2747 [Silicibacter sp. TrichCH4B]
 gi|259346469|gb|EEW58283.1| hypothetical protein SCH4B_2747 [Silicibacter sp. TrichCH4B]
          Length = 189

 Score =  205 bits (521), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 95/179 (53%), Positives = 137/179 (76%), Gaps = 2/179 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MF   E++ALFIDG+NLYAS+KALGFDIDY+ L + F  R  ++RA+YYT ++ +   ++
Sbjct: 1   MFYKDERLALFIDGSNLYASAKALGFDIDYKLLRQEFMRRGKLVRAFYYTALLEN--DEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E +  ++H+V+FS
Sbjct: 59  SPIRPLVDWLHYNGFSMVTKPAKEYTDSMGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
           GDG F  L+A+LQR+  +V++VST+ S P M SD+LRRQAD F++L  L++ I R P +
Sbjct: 119 GDGDFRPLIASLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELEELRDVIGRPPRD 177


>gi|89070109|ref|ZP_01157439.1| hypothetical protein OG2516_09048 [Oceanicola granulosus HTCC2516]
 gi|89044330|gb|EAR50473.1| hypothetical protein OG2516_09048 [Oceanicola granulosus HTCC2516]
          Length = 193

 Score =  205 bits (521), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 95/181 (52%), Positives = 135/181 (74%), Gaps = 2/181 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MF   E++ALFIDG+NLYA++K+LGFDIDY+ L + F  R  ++RA+YYT ++ +    +
Sbjct: 1   MFYRDERLALFIDGSNLYAAAKSLGFDIDYKLLRQEFMRRGKLLRAFYYTALLEN--DDY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           SP+ PL+DWLHYNGF +V K AKEFT++ GR++VK +MD+EL VDA E +  ++H+V+FS
Sbjct: 59  SPIRPLVDWLHYNGFTMVTKPAKEFTDSQGRRKVKGNMDIELTVDAMEIASHVDHIVLFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F  LV ALQRK  +V++ ST+ S P M +D+LRRQAD F++L  L+  + R P ED
Sbjct: 119 GDGDFRPLVEALQRKGVRVSVCSTIRSQPPMIADELRRQADNFIELDELREVVGRPPRED 178

Query: 181 K 181
           +
Sbjct: 179 R 179


>gi|260432747|ref|ZP_05786718.1| RtsE [Silicibacter lacuscaerulensis ITI-1157]
 gi|260416575|gb|EEX09834.1| RtsE [Silicibacter lacuscaerulensis ITI-1157]
          Length = 190

 Score =  204 bits (520), Expect = 3e-51,   Method: Composition-based stats.
 Identities = 94/179 (52%), Positives = 137/179 (76%), Gaps = 2/179 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MF   E++ALFIDG+NLYA++KALGFDIDY+ L + F  R  ++RA+YYT ++ +   ++
Sbjct: 1   MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLEN--DEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           SP+ PL+DWL+YNGF +V K AKE+T++ GR++VK +MD+EL VDA E +  ++H+V+FS
Sbjct: 59  SPIRPLVDWLNYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
           GDG F  L+A+LQR+  +V++VST+ S P M SD+LRRQAD F++L  L++ I R P E
Sbjct: 119 GDGDFRPLIASLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELDDLRDVIGRPPRE 177


>gi|83951635|ref|ZP_00960367.1| hypothetical protein ISM_13770 [Roseovarius nubinhibens ISM]
 gi|83836641|gb|EAP75938.1| hypothetical protein ISM_13770 [Roseovarius nubinhibens ISM]
          Length = 191

 Score =  204 bits (520), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 96/180 (53%), Positives = 136/180 (75%), Gaps = 2/180 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MF   E++ALFIDG+NLYA+ KALGFDIDY+ L   F  R  ++RA+YYT ++ +   ++
Sbjct: 1   MFYKDERLALFIDGSNLYAAGKALGFDIDYKLLRSEFMRRGKLLRAFYYTALLEN--DEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+ELAVDA E +  ++H+V+FS
Sbjct: 59  SPIRPLVDWLHYNGFSMVTKPAKEYTDSQGRRKVKGNMDIELAVDAMELAPHVDHIVLFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F  LV +LQR+  +V++VST+ S P M SD+LRRQAD F++L  LK+ I R P ++
Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELDDLKDVIGRPPRDN 178


>gi|83855035|ref|ZP_00948565.1| hypothetical protein NAS141_09906 [Sulfitobacter sp. NAS-14.1]
 gi|83941558|ref|ZP_00954020.1| hypothetical protein EE36_04978 [Sulfitobacter sp. EE-36]
 gi|83842878|gb|EAP82045.1| hypothetical protein NAS141_09906 [Sulfitobacter sp. NAS-14.1]
 gi|83847378|gb|EAP85253.1| hypothetical protein EE36_04978 [Sulfitobacter sp. EE-36]
          Length = 181

 Score =  204 bits (518), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 95/180 (52%), Positives = 135/180 (75%), Gaps = 2/180 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MF   E++ALFIDG+NLYA++K LGFDIDY+ L + F  R  ++RA+YYT ++ +   ++
Sbjct: 1   MFYKDERLALFIDGSNLYAAAKNLGFDIDYKLLRQEFMRRGKLLRAFYYTALLEN--DEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           SP+ PL+DWL+YNGF +V K AKE+T++ GR++VK +MD+ELAVDA E +  L+H+VIFS
Sbjct: 59  SPIRPLVDWLNYNGFSMVTKPAKEYTDSMGRRKVKGNMDIELAVDAMELAPHLDHIVIFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F  LV +LQR+  +V++VST+ S P M SD+LRRQ D F++L  L++ I R P E 
Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMISDELRRQVDNFIELEDLRDVIGRPPRET 178


>gi|84684017|ref|ZP_01011919.1| hypothetical protein 1099457000262_RB2654_16251 [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84667770|gb|EAQ14238.1| hypothetical protein RB2654_16251 [Rhodobacterales bacterium
           HTCC2654]
          Length = 191

 Score =  203 bits (517), Expect = 7e-51,   Method: Composition-based stats.
 Identities = 96/181 (53%), Positives = 135/181 (74%), Gaps = 2/181 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MF   E++ALFIDG+NLYA++K+LGFDIDY+ L + F  R  ++RA+YYT ++ +    +
Sbjct: 1   MFYKDERLALFIDGSNLYAAAKSLGFDIDYKLLRQEFMRRGKLLRAFYYTALLEN--DDY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           SP+ PL+DWLHYNGF +V K AKEFT++ GR++VK +MD+EL VDA E +  ++H+V+FS
Sbjct: 59  SPIRPLVDWLHYNGFTMVTKPAKEFTDSMGRRKVKGNMDIELTVDAMEIAPHVDHIVLFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F  LV  LQRK  +V++VST+ S P M +D+LRRQAD F++L  LK  I R P +D
Sbjct: 119 GDGDFRPLVEGLQRKGVRVSVVSTIRSQPPMIADELRRQADNFIELDELKEVIGRPPRDD 178

Query: 181 K 181
           +
Sbjct: 179 R 179


>gi|254453678|ref|ZP_05067115.1| DUF88 [Octadecabacter antarcticus 238]
 gi|198268084|gb|EDY92354.1| DUF88 [Octadecabacter antarcticus 238]
          Length = 194

 Score =  203 bits (517), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 95/182 (52%), Positives = 135/182 (74%), Gaps = 2/182 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MF   EK+ALFIDG+NLYA++KALGFDIDY+ L   F  R  ++RA+YYT ++ +   ++
Sbjct: 1   MFYRDEKLALFIDGSNLYAAAKALGFDIDYKLLRSEFMRRGKMLRAFYYTALLEN--DEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           SP+ PL+DWL+YNGF +V K AKEFT++ GR+++K +MD+ELAVDA E +  ++H+VIFS
Sbjct: 59  SPIRPLVDWLNYNGFTMVTKPAKEFTDSMGRRKIKGNMDIELAVDALELAPHVDHIVIFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F  LV +LQRK  +V++VST+ S P M +D+LRRQ D F++L  L++ I R   E 
Sbjct: 119 GDGDFRPLVESLQRKGVRVSVVSTIRSQPPMIADELRRQCDNFIELDELRDVIGRPTREA 178

Query: 181 KK 182
            +
Sbjct: 179 PR 180


>gi|222148076|ref|YP_002549033.1| hypothetical protein Avi_1440 [Agrobacterium vitis S4]
 gi|221735064|gb|ACM36027.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 192

 Score =  203 bits (516), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 119/181 (65%), Positives = 150/181 (82%), Gaps = 2/181 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R  ++RAYYYT ++ D  Q++
Sbjct: 1   MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S + PL+DWL YNG++V+ K AKEFT++ GR++VK +MD+ELA+DA EQSE ++HLVIFS
Sbjct: 59  SSIRPLIDWLDYNGYKVITKPAKEFTDSMGRRKVKGNMDIELAIDAMEQSETVDHLVIFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG FTTLV ALQRK +KV++VST+ + P M +D LRRQAD+F+DL  LK EI RDP E 
Sbjct: 119 GDGDFTTLVEALQRKGRKVSVVSTMSTQPPMIADDLRRQADHFIDLVSLKAEIGRDPSER 178

Query: 181 K 181
            
Sbjct: 179 P 179


>gi|227821396|ref|YP_002825366.1| hypothetical protein NGR_c08220 [Sinorhizobium fredii NGR234]
 gi|227340395|gb|ACP24613.1| hypothetical protein NGR_c08220 [Sinorhizobium fredii NGR234]
          Length = 192

 Score =  203 bits (516), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 118/180 (65%), Positives = 151/180 (83%), Gaps = 2/180 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R  ++RAYYYT ++ D  Q++
Sbjct: 1   MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS
Sbjct: 59  SSIRPLIDWLDYNGYKVVTKPAKEFTDSLGRRKIKGNMDIELAIDAMEQSETVDHLVIFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG FTTLV ALQRK +KV++VST+ + P M +D LRRQAD+F+DLA L+ EI R+P E 
Sbjct: 119 GDGDFTTLVEALQRKGRKVSVVSTMSTQPPMIADDLRRQADHFIDLATLRGEIGREPSER 178


>gi|149913459|ref|ZP_01901992.1| hypothetical protein RAZWK3B_09161 [Roseobacter sp. AzwK-3b]
 gi|149812579|gb|EDM72408.1| hypothetical protein RAZWK3B_09161 [Roseobacter sp. AzwK-3b]
          Length = 190

 Score =  202 bits (514), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 93/180 (51%), Positives = 135/180 (75%), Gaps = 2/180 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MF   E++ALFIDG+NLYA+++ALGFDIDY+ L   F  R  ++RA+YYT ++ +   ++
Sbjct: 1   MFYKDERLALFIDGSNLYAAARALGFDIDYKLLRAEFMRRGKLLRAFYYTAMLEN--DEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           SP+ PL+DWL+YNGF +V K AKE+T++ GR++VK +MD+EL VDA E +  ++H+V+FS
Sbjct: 59  SPIRPLVDWLNYNGFSMVTKPAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F  LV +LQR+  +V++VST+ S P M SD+LRRQAD F++L  LK+ I R P + 
Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELDDLKDVIGRPPRDP 178


>gi|260576279|ref|ZP_05844271.1| protein of unknown function DUF88 [Rhodobacter sp. SW2]
 gi|259021547|gb|EEW24851.1| protein of unknown function DUF88 [Rhodobacter sp. SW2]
          Length = 190

 Score =  202 bits (513), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 93/181 (51%), Positives = 137/181 (75%), Gaps = 2/181 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MF   +++ALFIDG+NLYA++KALGFDIDYR L + F  R  ++RA+YYT ++ +   ++
Sbjct: 1   MFYKDDRLALFIDGSNLYAAAKALGFDIDYRLLRQEFMRRGKLLRAFYYTALLEN--DEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL V+A E +  ++H+V+FS
Sbjct: 59  SPIRPLVDWLHYNGFSMVTKPAKEYTDSQGRRKVKGNMDIELTVNAMELAPHVDHVVLFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F  LV +LQR+  +V++VST+ S P M +D+LRRQAD F++L  L++ I R P E 
Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMIADELRRQADNFIELDELRDVIGRPPREP 178

Query: 181 K 181
           +
Sbjct: 179 R 179


>gi|15964816|ref|NP_385169.1| hypothetical protein SMc02407 [Sinorhizobium meliloti 1021]
 gi|307300886|ref|ZP_07580655.1| protein of unknown function DUF88 [Sinorhizobium meliloti BL225C]
 gi|307320703|ref|ZP_07600115.1| protein of unknown function DUF88 [Sinorhizobium meliloti AK83]
 gi|15073995|emb|CAC45642.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
 gi|306893630|gb|EFN24404.1| protein of unknown function DUF88 [Sinorhizobium meliloti AK83]
 gi|306903841|gb|EFN34427.1| protein of unknown function DUF88 [Sinorhizobium meliloti BL225C]
          Length = 192

 Score =  201 bits (512), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 118/180 (65%), Positives = 151/180 (83%), Gaps = 2/180 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R  ++RAYYYT ++ D  Q++
Sbjct: 1   MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS
Sbjct: 59  SSIRPLIDWLDYNGYKVVTKPAKEFTDSLGRRKIKGNMDIELAIDAMEQSESVDHLVIFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG FTTLV ALQRK +KV++VST+ + P M +D LRRQAD+F+DLA L+ EI R+P E 
Sbjct: 119 GDGDFTTLVEALQRKGRKVSVVSTMSTQPPMIADDLRRQADHFIDLATLRGEIGREPSER 178


>gi|51102762|gb|AAT95984.1| RtsE [Sinorhizobium meliloti]
          Length = 191

 Score =  201 bits (512), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 118/180 (65%), Positives = 151/180 (83%), Gaps = 2/180 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R  ++RAYYYT ++ D  Q++
Sbjct: 1   MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS
Sbjct: 59  SSIRPLIDWLDYNGYKVVTKPAKEFTDSLGRRKIKGNMDIELAIDAMEQSESVDHLVIFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG FTTLV ALQRK +KV++VST+ + P M +D LRRQAD+F+DLA L+ EI R+P E 
Sbjct: 119 GDGDFTTLVEALQRKGRKVSVVSTMSTQPPMIADDLRRQADHFIDLATLRGEIGREPSER 178


>gi|126726103|ref|ZP_01741945.1| hypothetical protein RB2150_07843 [Rhodobacterales bacterium
           HTCC2150]
 gi|126705307|gb|EBA04398.1| hypothetical protein RB2150_07843 [Rhodobacterales bacterium
           HTCC2150]
          Length = 191

 Score =  201 bits (511), Expect = 3e-50,   Method: Composition-based stats.
 Identities = 93/182 (51%), Positives = 138/182 (75%), Gaps = 2/182 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MF   E++ALFIDG+NLYA++K+LGFDIDY+ L   F  R  ++RA+YYT ++ +   ++
Sbjct: 1   MFYRDERLALFIDGSNLYAAAKSLGFDIDYKLLRTEFMRRGKLLRAFYYTALLEN--DEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+EL VDA E +  ++H+V+FS
Sbjct: 59  SPIRPLVDWLHYNGFNMVTKPAKEYTDSQGRRKVKGNMDIELTVDALELAPHVDHIVLFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F  ++AA+QR+  +V++VST+ S+P M SD+LRRQAD F++L  LK+ + R P E 
Sbjct: 119 GDGDFRPMIAAVQRQGVRVSVVSTIRSNPPMISDELRRQADNFIELDELKDVVGRPPREM 178

Query: 181 KK 182
            +
Sbjct: 179 PE 180


>gi|150395899|ref|YP_001326366.1| hypothetical protein Smed_0675 [Sinorhizobium medicae WSM419]
 gi|150027414|gb|ABR59531.1| protein of unknown function DUF88 [Sinorhizobium medicae WSM419]
          Length = 193

 Score =  201 bits (511), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 118/180 (65%), Positives = 151/180 (83%), Gaps = 2/180 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R  ++RAYYYT ++ D  Q++
Sbjct: 2   MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 59

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS
Sbjct: 60  SSIRPLIDWLDYNGYKVVTKPAKEFTDSLGRRKIKGNMDIELAIDAMEQSESVDHLVIFS 119

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG FTTLV ALQRK +KV++VST+ + P M +D LRRQAD+F+DLA L+ EI R+P E 
Sbjct: 120 GDGDFTTLVEALQRKGRKVSVVSTMATQPPMIADDLRRQADHFIDLASLRAEIGREPSER 179


>gi|163744864|ref|ZP_02152224.1| hypothetical protein OIHEL45_04735 [Oceanibulbus indolifex HEL-45]
 gi|161381682|gb|EDQ06091.1| hypothetical protein OIHEL45_04735 [Oceanibulbus indolifex HEL-45]
          Length = 184

 Score =  201 bits (511), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 95/180 (52%), Positives = 135/180 (75%), Gaps = 2/180 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MF   E++ALFIDG+NLYA++KALGFDIDY+ L + F  R  ++RA+YYT ++ +   ++
Sbjct: 1   MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLEN--DEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           SP+ PL+DWL+YNGF +V K AKE+T++ GR++VK  MD+ELAVDA E +  ++H+VIFS
Sbjct: 59  SPIRPLVDWLNYNGFSMVTKPAKEYTDSMGRRKVKGDMDIELAVDAMELAPRVDHIVIFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F  LV +LQR+  +V++VST+ S P M SD LRRQAD F++L  L++ I R P + 
Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMISDDLRRQADNFIELDDLRDVIGRPPRDP 178


>gi|255263963|ref|ZP_05343305.1| hypothetical protein TR2A62_2961 [Thalassiobium sp. R2A62]
 gi|255106298|gb|EET48972.1| hypothetical protein TR2A62_2961 [Thalassiobium sp. R2A62]
          Length = 192

 Score =  201 bits (510), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 95/179 (53%), Positives = 136/179 (75%), Gaps = 2/179 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MF   E++ALFIDG+NLYA++KALGFDIDY+ L   F  R  ++RA+YYT ++ +   ++
Sbjct: 1   MFYRDERLALFIDGSNLYAAAKALGFDIDYKLLRTEFMRRGKMLRAFYYTALLEN--DEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           SP+ PL+DWL+YNGF +V K AKEFT++ GR+++K +MD+ELAVDA E +  ++H+VIFS
Sbjct: 59  SPIRPLVDWLNYNGFTMVTKPAKEFTDSIGRRKIKGNMDIELAVDAMELAPHVDHIVIFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
           GDG F  LV A+QRK  +V++VST+ S P M +D+LRRQAD F++L  L++ + R P E
Sbjct: 119 GDGDFRPLVEAIQRKGVRVSVVSTIRSQPPMIADELRRQADNFIELDELRDVVGRPPRE 177


>gi|84515155|ref|ZP_01002518.1| hypothetical protein SKA53_13063 [Loktanella vestfoldensis SKA53]
 gi|84511314|gb|EAQ07768.1| hypothetical protein SKA53_13063 [Loktanella vestfoldensis SKA53]
          Length = 187

 Score =  201 bits (510), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 95/181 (52%), Positives = 136/181 (75%), Gaps = 2/181 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MF   E++ALFIDG+NLYA+++ALGFDIDY+ L + F  R  ++RA+YYT ++ +   ++
Sbjct: 1   MFYRDERLALFIDGSNLYAAARALGFDIDYKLLRQEFMRRGKLLRAFYYTALLEN--DEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           SP+ PL+DWLHYNG+ ++ K AKEFT++ GR++VK +MD+ELAVDA E +  L+H VIFS
Sbjct: 59  SPIRPLVDWLHYNGYSMITKPAKEFTDSLGRRKVKGNMDIELAVDAMELTPYLDHAVIFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F  L+ ALQRK  +V++VST+ S P M +D+LRRQAD F++L  L++ I R   E 
Sbjct: 119 GDGDFRPLIEALQRKGVRVSVVSTIRSQPPMIADELRRQADNFIELEELRDVIGRPAREP 178

Query: 181 K 181
           +
Sbjct: 179 R 179


>gi|227819053|ref|YP_002823024.1| hypothetical protein NGR_b08150 [Sinorhizobium fredii NGR234]
 gi|227338052|gb|ACP22271.1| conserved hypothetical protein [Sinorhizobium fredii NGR234]
          Length = 194

 Score =  201 bits (510), Expect = 5e-50,   Method: Composition-based stats.
 Identities = 118/179 (65%), Positives = 149/179 (83%), Gaps = 2/179 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MFDPREKIALFIDGANL+A+SK LGFDIDYRKLL+AFRSRA ++RAYYYT ++ D   +F
Sbjct: 1   MFDPREKIALFIDGANLFATSKTLGFDIDYRKLLEAFRSRAYLLRAYYYTALIEDL--EF 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S + PL+DWL YNG+ VV K AKEFT++ GR+++K SMD+ELA+DA E S+ ++H VIFS
Sbjct: 59  SSIRPLIDWLDYNGYTVVTKPAKEFTDSQGRRKIKGSMDIELAIDAMEHSQTVDHFVIFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
           GDG FT LV ALQRK +KV++VST+L+ P M +DQLRRQAD+F+DLA L++EI R P E
Sbjct: 119 GDGDFTPLVEALQRKGRKVSVVSTILTQPPMIADQLRRQADHFIDLATLRSEIGRHPRE 177


>gi|85705102|ref|ZP_01036202.1| hypothetical protein ROS217_04305 [Roseovarius sp. 217]
 gi|85670424|gb|EAQ25285.1| hypothetical protein ROS217_04305 [Roseovarius sp. 217]
          Length = 190

 Score =  200 bits (509), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 95/179 (53%), Positives = 135/179 (75%), Gaps = 2/179 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MF   E++ALFIDG+NLYA+ KALGFDIDY+ L   F  R  ++RA+YYT ++ +   ++
Sbjct: 1   MFYKDERLALFIDGSNLYAAGKALGFDIDYKLLRSEFMRRGKLLRAFYYTALLEN--DEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           SP+ PL+DWLHYNG+ +V K AKE+T++ GR++VK +MD+EL VDA E +  ++H+V+FS
Sbjct: 59  SPIRPLVDWLHYNGYSMVTKPAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
           GDG F  LV +LQR+  +V++VST+ S P M SD+LRRQAD F++LA LK+ I R P +
Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELADLKDVIGRPPRD 177


>gi|126733749|ref|ZP_01749496.1| hypothetical protein RCCS2_06319 [Roseobacter sp. CCS2]
 gi|126716615|gb|EBA13479.1| hypothetical protein RCCS2_06319 [Roseobacter sp. CCS2]
          Length = 193

 Score =  200 bits (509), Expect = 6e-50,   Method: Composition-based stats.
 Identities = 92/181 (50%), Positives = 137/181 (75%), Gaps = 2/181 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MF   E++ALFIDG+NLYA++K+LGFDIDY+ L + F  R  ++RA+YYT ++ +   ++
Sbjct: 1   MFYRDERLALFIDGSNLYAAAKSLGFDIDYKLLRQEFMRRGKMLRAFYYTALLEN--DEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           SP+ PL+DWL+YNGF +V K AKE+T++ GR++VK +MD+ELAVDA E +  ++H+V+FS
Sbjct: 59  SPIRPLVDWLNYNGFTMVTKPAKEYTDSMGRRKVKGNMDIELAVDAMELAPYVDHVVLFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F  LV +LQRK  +V++VST+ S P M +D+LRRQAD F++L  L++ + R   E 
Sbjct: 119 GDGDFRPLVESLQRKGVRVSVVSTIRSQPPMIADELRRQADNFIELDELRDVVGRPTREP 178

Query: 181 K 181
           +
Sbjct: 179 R 179


>gi|190891066|ref|YP_001977608.1| hypothetical protein RHECIAT_CH0001451 [Rhizobium etli CIAT 652]
 gi|218508406|ref|ZP_03506284.1| hypothetical protein RetlB5_12894 [Rhizobium etli Brasil 5]
 gi|190696345|gb|ACE90430.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
 gi|327191317|gb|EGE58350.1| hypothetical protein RHECNPAF_32006 [Rhizobium etli CNPAF512]
          Length = 193

 Score =  200 bits (509), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 116/180 (64%), Positives = 149/180 (82%), Gaps = 2/180 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R  ++RAYYYT ++ D  Q++
Sbjct: 1   MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS
Sbjct: 59  SSIRPLIDWLDYNGYKVVTKPAKEFTDSMGRRKIKGNMDIELAIDAMEQSETVDHLVIFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG FT LV ALQR+ +KV+++ST+ + P M +D LRRQAD+F+DL  LK EI RDP E 
Sbjct: 119 GDGDFTNLVEALQRRGRKVSVISTMATQPPMIADDLRRQADHFIDLLSLKAEIGRDPSER 178


>gi|254439991|ref|ZP_05053485.1| conserved hypothetical protein [Octadecabacter antarcticus 307]
 gi|198255437|gb|EDY79751.1| conserved hypothetical protein [Octadecabacter antarcticus 307]
          Length = 195

 Score =  200 bits (509), Expect = 7e-50,   Method: Composition-based stats.
 Identities = 96/182 (52%), Positives = 135/182 (74%), Gaps = 2/182 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MF   EK+ALFIDG+NLYAS+K+LGFDIDY+ L   F  R  ++RAYYYT ++ +   ++
Sbjct: 1   MFYRDEKLALFIDGSNLYASAKSLGFDIDYKLLRAEFMRRGKMLRAYYYTALLEN--DEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           SP+ PL+DWL+YNGF +V K AKEFT++ GR+++K +MD+ELAVDA E +  ++H+VIFS
Sbjct: 59  SPIRPLVDWLNYNGFTMVTKPAKEFTDSMGRRKIKGNMDIELAVDALELAPHVDHIVIFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F  LV +LQRK  +V++VST+ S P M +D+LRRQ D F++L  L++ I R   E 
Sbjct: 119 GDGDFRPLVESLQRKGVRVSVVSTIRSQPPMIADELRRQCDNFIELDELRDVIGRPVREA 178

Query: 181 KK 182
            +
Sbjct: 179 PR 180


>gi|163760601|ref|ZP_02167682.1| hypothetical protein HPDFL43_11921 [Hoeflea phototrophica DFL-43]
 gi|162282216|gb|EDQ32506.1| hypothetical protein HPDFL43_11921 [Hoeflea phototrophica DFL-43]
          Length = 196

 Score =  199 bits (507), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 115/182 (63%), Positives = 151/182 (82%), Gaps = 2/182 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MFDPREKIALFIDGANLYA+SK+L FDIDYRKLLK+F+ R  ++RAYYYT ++ D  Q++
Sbjct: 1   MFDPREKIALFIDGANLYAASKSLNFDIDYRKLLKSFQGRGYLLRAYYYTALIED--QEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+ELA+DA EQ+E ++HLVIFS
Sbjct: 59  SSIRPLIDWLDYNGYKVVTKPAKEFTDSMGRRKVKGNMDIELAIDAMEQAEVVDHLVIFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG FT+LV ALQRK +KVT+VS++ + P M +D LRRQADYF+DL+ LK+EI R+  E 
Sbjct: 119 GDGDFTSLVEALQRKGRKVTVVSSLSTQPPMIADDLRRQADYFLDLSTLKSEIGRESSER 178

Query: 181 KK 182
            +
Sbjct: 179 PQ 180


>gi|254460504|ref|ZP_05073920.1| hypothetical protein RB2083_1094 [Rhodobacterales bacterium
           HTCC2083]
 gi|206677093|gb|EDZ41580.1| hypothetical protein RB2083_1094 [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 190

 Score =  199 bits (506), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 94/180 (52%), Positives = 134/180 (74%), Gaps = 2/180 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MF   E++ALFIDG NLYA++KALGFDIDY+ L   F  R  ++RA+YYT ++ +   ++
Sbjct: 1   MFYKDERLALFIDGLNLYAAAKALGFDIDYKLLRTEFMRRGKMLRAFYYTALLEN--DEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           SP+ PL+DWL+YNGF +V K AKE+T++ GR++VK +MD+EL VDA E +  ++H+V+FS
Sbjct: 59  SPIRPLVDWLNYNGFTMVTKQAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHIVLFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F  LV +LQR+  +V++VST+ S P M SD+LRRQAD F++L  LK+ + R P E 
Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMISDELRRQADNFIELDELKDVLGRPPREP 178


>gi|116251270|ref|YP_767108.1| hypothetical protein RL1504 [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115255918|emb|CAK06999.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 193

 Score =  199 bits (506), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 116/180 (64%), Positives = 149/180 (82%), Gaps = 2/180 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R  ++RAYYYT ++ D  Q++
Sbjct: 1   MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS
Sbjct: 59  SSIRPLIDWLDYNGYKVVTKPAKEFTDSMGRRKIKGNMDIELAIDAMEQSETVDHLVIFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG FT LV ALQR+ +KV+++ST+ + P M +D LRRQAD+F+DL  LK EI RDP E 
Sbjct: 119 GDGDFTNLVEALQRRGRKVSVISTMATQPPMIADDLRRQADHFIDLLSLKAEIGRDPSER 178


>gi|241203882|ref|YP_002974978.1| hypothetical protein Rleg_1144 [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240857772|gb|ACS55439.1| protein of unknown function DUF88 [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 193

 Score =  199 bits (506), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 116/180 (64%), Positives = 149/180 (82%), Gaps = 2/180 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R  ++RAYYYT ++ D  Q++
Sbjct: 1   MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS
Sbjct: 59  SSIRPLIDWLDYNGYKVVTKPAKEFTDSMGRRKIKGNMDIELAIDAMEQSETVDHLVIFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG FT LV ALQR+ +KV+++ST+ + P M +D LRRQAD+F+DL  LK EI RDP E 
Sbjct: 119 GDGDFTNLVEALQRRGRKVSVISTMATQPPMIADDLRRQADHFIDLLSLKAEIGRDPSER 178


>gi|254487193|ref|ZP_05100398.1| DUF88 [Roseobacter sp. GAI101]
 gi|214044062|gb|EEB84700.1| DUF88 [Roseobacter sp. GAI101]
          Length = 181

 Score =  199 bits (505), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 94/180 (52%), Positives = 135/180 (75%), Gaps = 2/180 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MF   E++ALFIDG+NLYA++K+LGFDIDY+ L + F  R  ++RA+YYT ++ +  +++
Sbjct: 1   MFYKDERLALFIDGSNLYAAAKSLGFDIDYKLLRQEFMRRGKLLRAFYYTALLEN--EEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           SP+ PL+DWL+YNGF +V K AKE+T++ GR++VK +MD+ELAVDA E +  L+H+VIFS
Sbjct: 59  SPIRPLVDWLNYNGFSMVTKPAKEYTDSMGRRKVKGNMDIELAVDAMELAPHLDHIVIFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F  LV +LQR+  +V++VST+ S P M SD LRRQ D F++L  L++ I R   E 
Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMISDDLRRQVDNFIELEDLRDVIGRPARET 178


>gi|149200815|ref|ZP_01877790.1| hypothetical protein RTM1035_14357 [Roseovarius sp. TM1035]
 gi|149145148|gb|EDM33174.1| hypothetical protein RTM1035_14357 [Roseovarius sp. TM1035]
          Length = 190

 Score =  198 bits (504), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 95/179 (53%), Positives = 134/179 (74%), Gaps = 2/179 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MF   E++ALFIDG+NLYA+ KALGFDIDY+ L   F  R  ++RA+YYT ++ +   ++
Sbjct: 1   MFYKDERLALFIDGSNLYAAGKALGFDIDYKLLRSEFMRRGKLLRAFYYTALLEN--DEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           SP+ PL+DWLHYNG+ +V K AKE+T++ GR++VK +MD+EL VDA E +  ++H+V+FS
Sbjct: 59  SPIRPLVDWLHYNGYSMVTKPAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHVVLFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
           GDG F  LV +LQR+  +V++VST+ S P M SD LRRQAD F++LA LK+ I R P +
Sbjct: 119 GDGDFRPLVESLQRQGVRVSVVSTIRSQPPMISDDLRRQADNFIELADLKDVIGRPPRD 177


>gi|159184584|ref|NP_354050.2| hypothetical protein Atu1028 [Agrobacterium tumefaciens str. C58]
 gi|159139886|gb|AAK86835.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
          Length = 189

 Score =  198 bits (503), Expect = 3e-49,   Method: Composition-based stats.
 Identities = 119/181 (65%), Positives = 150/181 (82%), Gaps = 2/181 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R  ++RAYYYT ++ D  Q++
Sbjct: 1   MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S + PL+DWL YNG++VV K AKEFT+  GR+++K +MD+ELAVDA EQSE ++HLV+FS
Sbjct: 59  SSIRPLIDWLDYNGYKVVTKPAKEFTDALGRRKIKGNMDIELAVDAMEQSETVDHLVLFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG FTTLV ALQRK +KV++VST+ + P+M +D LRRQAD+F+DL  LK EI RDP E 
Sbjct: 119 GDGDFTTLVDALQRKGRKVSVVSTMATQPAMIADDLRRQADHFIDLMTLKAEIGRDPSER 178

Query: 181 K 181
            
Sbjct: 179 P 179


>gi|254504996|ref|ZP_05117147.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
 gi|222441067|gb|EEE47746.1| conserved hypothetical protein [Labrenzia alexandrii DFL-11]
          Length = 196

 Score =  197 bits (502), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 105/182 (57%), Positives = 146/182 (80%), Gaps = 2/182 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MFD REK+ALFIDGANLY+++KA+GFDIDY++LLK F+ +A ++RAYYYT ++ D  Q++
Sbjct: 1   MFDAREKVALFIDGANLYSTAKAIGFDIDYKRLLKEFQGQAYLLRAYYYTALIED--QEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S + PL+DWL YNG++V+ K  KEF ++ GR++VK +MD+ELAVDA E  E ++H+V+FS
Sbjct: 59  SSIRPLIDWLDYNGYKVITKPVKEFVDSAGRRKVKGNMDIELAVDAMELVESVDHIVLFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F +LV ALQRK +KV++VST+ + P M +D LRRQAD+F+DLA L N+I RDP E 
Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLKTQPPMIADDLRRQADHFIDLASLANKIGRDPSER 178

Query: 181 KK 182
            +
Sbjct: 179 PQ 180


>gi|86357021|ref|YP_468913.1| hypothetical protein RHE_CH01383 [Rhizobium etli CFN 42]
 gi|86281123|gb|ABC90186.1| hypothetical conserved protein [Rhizobium etli CFN 42]
          Length = 193

 Score =  197 bits (502), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 116/180 (64%), Positives = 149/180 (82%), Gaps = 2/180 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R  ++RAYYYT ++ D  Q++
Sbjct: 1   MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS
Sbjct: 59  SSIRPLIDWLDYNGYKVVTKPAKEFTDSMGRRKIKGNMDIELAIDAMEQSETVDHLVIFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG FT LV ALQR+ +KV+++ST+ + P M +D LRRQAD+F+DL  LK EI RDP E 
Sbjct: 119 GDGDFTNLVEALQRRGRKVSVISTMATQPPMIADDLRRQADHFIDLLSLKAEIGRDPAER 178


>gi|209548594|ref|YP_002280511.1| hypothetical protein Rleg2_0991 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209534350|gb|ACI54285.1| protein of unknown function DUF88 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 195

 Score =  197 bits (502), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 116/180 (64%), Positives = 149/180 (82%), Gaps = 2/180 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R  ++RAYYYT ++ D  Q++
Sbjct: 1   MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS
Sbjct: 59  SSIRPLIDWLDYNGYKVVTKPAKEFTDSMGRRKIKGNMDIELAIDAMEQSETVDHLVIFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG FT LV ALQR+ +KV+++ST+ + P M +D LRRQAD+F+DL  LK EI RDP E 
Sbjct: 119 GDGDFTNLVEALQRRGRKVSVISTMSTQPPMIADDLRRQADHFIDLLSLKAEIGRDPAER 178


>gi|222085384|ref|YP_002543914.1| hypothetical protein Arad_1584 [Agrobacterium radiobacter K84]
 gi|221722832|gb|ACM25988.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
          Length = 194

 Score =  197 bits (502), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 116/182 (63%), Positives = 151/182 (82%), Gaps = 2/182 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R  ++RAYYYT ++ D  Q++
Sbjct: 1   MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS
Sbjct: 59  SSIRPLIDWLDYNGYKVVTKPAKEFTDSMGRRKIKGNMDIELAIDAMEQSETVDHLVIFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG FTTLV ALQR+ +KV+++ST+ + P M +D LRRQAD+F+DL  LK EI RDP + 
Sbjct: 119 GDGDFTTLVEALQRRGRKVSVISTMATQPPMIADDLRRQADHFIDLVSLKAEIGRDPSDR 178

Query: 181 KK 182
            +
Sbjct: 179 PQ 180


>gi|119384144|ref|YP_915200.1| hypothetical protein Pden_1403 [Paracoccus denitrificans PD1222]
 gi|119373911|gb|ABL69504.1| protein of unknown function DUF88 [Paracoccus denitrificans PD1222]
          Length = 183

 Score =  197 bits (502), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 93/179 (51%), Positives = 134/179 (74%), Gaps = 2/179 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MF   +++ALFIDG+NLYA++K+LGFDIDY+ L + F  R  +IRAYYYT ++ +  + +
Sbjct: 1   MFYKDDRLALFIDGSNLYAAAKSLGFDIDYKLLRQEFERRGKLIRAYYYTALLEN--EDY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           SP+ PL+DWLHYNG+ +V K A+E+T+  GR++VK +MDVEL ++A E +  L+H V+FS
Sbjct: 59  SPIRPLVDWLHYNGYSMVTKPAREYTDALGRRKVKGNMDVELVINAMELAPRLDHAVLFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
           GDG F  LV ALQR+  +V++VST+ S P M +D+LRRQAD F++L  L++ I R P E
Sbjct: 119 GDGDFRPLVEALQRQGVRVSVVSTMRSQPPMIADELRRQADNFIELDALRDIIGRPPRE 177


>gi|218678619|ref|ZP_03526516.1| hypothetical protein RetlC8_06939 [Rhizobium etli CIAT 894]
          Length = 193

 Score =  197 bits (501), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 116/180 (64%), Positives = 149/180 (82%), Gaps = 2/180 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R  ++RAYYYT ++ D  Q++
Sbjct: 1   MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+DA EQSE ++HLVIFS
Sbjct: 59  SSIRPLIDWLDYNGYKVVTKPAKEFTDSMGRRKIKGNMDIELAIDAMEQSETVDHLVIFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG FT LV ALQR+ +KV+++ST+ + P M +D LRRQAD+F+DL  LK EI RDP E 
Sbjct: 119 GDGDFTNLVEALQRRGRKVSVISTMATQPPMIADDLRRQADHFIDLLSLKAEIGRDPAER 178


>gi|13476434|ref|NP_108004.1| hypothetical protein mll7752 [Mesorhizobium loti MAFF303099]
 gi|319784512|ref|YP_004143988.1| hypothetical protein Mesci_4829 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|14027195|dbj|BAB54149.1| mll7752 [Mesorhizobium loti MAFF303099]
 gi|317170400|gb|ADV13938.1| hypothetical protein Mesci_4829 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 193

 Score =  196 bits (499), Expect = 8e-49,   Method: Composition-based stats.
 Identities = 116/181 (64%), Positives = 146/181 (80%), Gaps = 2/181 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MFDPREKIALFIDGANLYA+S+ALGFDIDYRKLL +F+ R  ++RAYYYT +V D  Q++
Sbjct: 1   MFDPREKIALFIDGANLYATSRALGFDIDYRKLLSSFQKRGYLLRAYYYTALVED--QEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S + PL+DWL YNGF+VV K AKEFT++ GR+++K +MD+EL VDA E ++ ++H VIFS
Sbjct: 59  SSIRPLIDWLDYNGFKVVTKPAKEFTDSTGRRKIKGNMDIELTVDALELADVVDHYVIFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F TLV ALQR+ +KV+IVST+ S P M SD LRRQAD+F+DL  LKNE+ RDP E 
Sbjct: 119 GDGDFRTLVEALQRRGRKVSIVSTMASQPPMISDDLRRQADHFIDLTTLKNEVGRDPSER 178

Query: 181 K 181
            
Sbjct: 179 P 179


>gi|83593194|ref|YP_426946.1| hypothetical protein Rru_A1859 [Rhodospirillum rubrum ATCC 11170]
 gi|83576108|gb|ABC22659.1| Protein of unknown function DUF88 [Rhodospirillum rubrum ATCC
           11170]
          Length = 214

 Score =  196 bits (499), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 98/183 (53%), Positives = 138/183 (75%), Gaps = 4/183 (2%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           +F P+E+I LFIDG+NLYA+++ALGFDIDY++LL+ F ++  +IRA+YYT +V D  Q++
Sbjct: 2   IFYPQERIGLFIDGSNLYAAARALGFDIDYKRLLELFAAKGRLIRAFYYTALVED--QEY 59

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           SP+ PL+DWL YNG+ +V K  KEFT+  GR+++K +MD+ELA+D  E +  L+H+V+FS
Sbjct: 60  SPIRPLVDWLDYNGYTMVTKPTKEFTDATGRRKIKGNMDIELAIDVMEMAPHLDHIVLFS 119

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP--D 178
           GDG F  LV A+QRK  +VT+VSTV S P M +D+LRRQAD F++L  L+  IAR P   
Sbjct: 120 GDGDFRRLVDAVQRKGLRVTVVSTVRSQPPMVADELRRQADTFIELLDLEPSIARAPLHR 179

Query: 179 EDK 181
           E  
Sbjct: 180 EPP 182


>gi|254469949|ref|ZP_05083354.1| DUF88 [Pseudovibrio sp. JE062]
 gi|211961784|gb|EEA96979.1| DUF88 [Pseudovibrio sp. JE062]
          Length = 194

 Score =  196 bits (497), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 100/181 (55%), Positives = 145/181 (80%), Gaps = 2/181 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MFDPREKIALFIDGANLY+++KA+GFDIDY++LLK F+S+  ++RAYYYT +V +  Q++
Sbjct: 1   MFDPREKIALFIDGANLYSTAKAIGFDIDYKRLLKEFQSKGYLLRAYYYTALVEE--QEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S + PL+DWL YNG++VV K  KEF ++ GR+++K +MD+ELAVDA +  + ++H+V+FS
Sbjct: 59  SSIRPLIDWLDYNGYKVVTKPVKEFVDSAGRRKIKGNMDIELAVDAMQLIDHVDHIVLFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F +LV ALQR+ +KV++VST+ + P M +D LRRQAD+F++L+ L   + RDP+E 
Sbjct: 119 GDGDFRSLVEALQRRGRKVSVVSTLQTQPPMIADDLRRQADHFIELSTLMQRVGRDPNER 178

Query: 181 K 181
            
Sbjct: 179 P 179


>gi|325292407|ref|YP_004278271.1| hypothetical protein AGROH133_05017 [Agrobacterium sp. H13-3]
 gi|325060260|gb|ADY63951.1| hypothetical protein AGROH133_05017 [Agrobacterium sp. H13-3]
          Length = 189

 Score =  196 bits (497), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 118/181 (65%), Positives = 150/181 (82%), Gaps = 2/181 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MFDPREKIALFIDGANLYA+SK+LGFDIDYRKLLKAF+ R  ++RAYYYT ++ D  Q++
Sbjct: 1   MFDPREKIALFIDGANLYAASKSLGFDIDYRKLLKAFQKRGYLLRAYYYTALIED--QEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S + PL+DWL YNG++VV K AKEFT+  GR+++K +MD+ELAVDA EQSE ++HLV+FS
Sbjct: 59  SSIRPLIDWLDYNGYKVVTKPAKEFTDALGRRKIKGNMDIELAVDAMEQSETVDHLVLFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG FT LV ALQRK +KV++VST+ + P+M +D LRRQAD+F+DL  LK EI RDP+E 
Sbjct: 119 GDGDFTKLVDALQRKGRKVSVVSTMATQPAMIADDLRRQADHFIDLMTLKAEIGRDPNER 178

Query: 181 K 181
            
Sbjct: 179 P 179


>gi|170748311|ref|YP_001754571.1| hypothetical protein Mrad2831_1893 [Methylobacterium radiotolerans
           JCM 2831]
 gi|170654833|gb|ACB23888.1| protein of unknown function DUF88 [Methylobacterium radiotolerans
           JCM 2831]
          Length = 213

 Score =  196 bits (497), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 97/177 (54%), Positives = 138/177 (77%), Gaps = 2/177 (1%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
            ++ A+FIDGANLYA++KALGFDIDY+KLLK F+SR  ++RA+YYT ++ D  Q++S + 
Sbjct: 4   TQRSAIFIDGANLYATTKALGFDIDYKKLLKEFQSRENLLRAFYYTAMIED--QEYSSIR 61

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
           PL+DWL YNG++VV K  KEFT++ GR++ K +MD+ELA+DA E S  ++H+++FSGDG 
Sbjct: 62  PLIDWLDYNGYRVVTKPVKEFTDSMGRRKYKGNMDIELAIDALELSPHIDHMILFSGDGD 121

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
           F +LV A+QR+  KVT++ST+ + P+M SD+LRRQAD F+DLA L   I R+P E  
Sbjct: 122 FRSLVEAMQRRGVKVTVISTIQTQPAMISDELRRQADEFVDLASLAGRIGREPGERP 178


>gi|260462331|ref|ZP_05810539.1| protein of unknown function DUF88 [Mesorhizobium opportunistum
           WSM2075]
 gi|259031825|gb|EEW33093.1| protein of unknown function DUF88 [Mesorhizobium opportunistum
           WSM2075]
          Length = 193

 Score =  195 bits (495), Expect = 2e-48,   Method: Composition-based stats.
 Identities = 116/181 (64%), Positives = 146/181 (80%), Gaps = 2/181 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MFDPREKIALFIDGANLYA+S+ALGFDIDYRKLL +F+ R  ++RAYYYT +V D  Q++
Sbjct: 1   MFDPREKIALFIDGANLYATSRALGFDIDYRKLLSSFQKRGYLLRAYYYTALVED--QEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S + PL+DWL YNGF+VV K AKEFT++ GR+++K +MD+EL VDA E ++ ++H VIFS
Sbjct: 59  SSIRPLIDWLDYNGFKVVTKPAKEFTDSTGRRKIKGNMDIELTVDALELADVVDHYVIFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F TLV ALQR+ +KV+IVST+ S P M SD LRRQAD+F+DL  LKNE+ RDP E 
Sbjct: 119 GDGDFRTLVEALQRRGRKVSIVSTMASQPPMISDDLRRQADHFIDLVTLKNEVGRDPSER 178

Query: 181 K 181
            
Sbjct: 179 P 179


>gi|159042747|ref|YP_001531541.1| hypothetical protein Dshi_0191 [Dinoroseobacter shibae DFL 12]
 gi|157910507|gb|ABV91940.1| protein of unknown function DUF88 [Dinoroseobacter shibae DFL 12]
          Length = 190

 Score =  194 bits (493), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 92/174 (52%), Positives = 132/174 (75%), Gaps = 2/174 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MF   +++ALFIDG+NLYA++KALGFDIDY+ L + F  R  ++RA+YYT ++ +   ++
Sbjct: 1   MFYKDDRLALFIDGSNLYAAAKALGFDIDYKLLRQEFMRRGKLLRAFYYTALLEN--DEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           SP+ PL+DWLHYNGF +V K AKE+T++ GR++VK +MD+ELAVDA E +  ++H V+FS
Sbjct: 59  SPIRPLVDWLHYNGFSMVTKPAKEYTDSQGRRKVKGNMDIELAVDAMELAPHMDHAVLFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
           GDG F  L+ +LQR+  +V++VST+ S P M SD+LRRQAD F++L  LK  I 
Sbjct: 119 GDGDFRPLIESLQRRGVRVSVVSTIRSHPPMISDELRRQADNFIELDELKEIIG 172


>gi|256060778|ref|ZP_05450940.1| hypothetical protein Bneo5_10505 [Brucella neotomae 5K33]
 gi|256369087|ref|YP_003106595.1| hypothetical protein BMI_I648 [Brucella microti CCM 4915]
 gi|261324768|ref|ZP_05963965.1| conserved hypothetical protein [Brucella neotomae 5K33]
 gi|306842086|ref|ZP_07474758.1| cytoplasmic protein [Brucella sp. BO2]
 gi|306845250|ref|ZP_07477826.1| cytoplasmic protein [Brucella sp. BO1]
 gi|255999247|gb|ACU47646.1| hypothetical protein BMI_I648 [Brucella microti CCM 4915]
 gi|261300748|gb|EEY04245.1| conserved hypothetical protein [Brucella neotomae 5K33]
 gi|306274409|gb|EFM56216.1| cytoplasmic protein [Brucella sp. BO1]
 gi|306287836|gb|EFM59259.1| cytoplasmic protein [Brucella sp. BO2]
          Length = 191

 Score =  194 bits (492), Expect = 6e-48,   Method: Composition-based stats.
 Identities = 114/180 (63%), Positives = 146/180 (81%), Gaps = 2/180 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MFD REKIALFIDGANLYA+SK LGFDIDYRKLLKAF+ R  ++RAYYYT +V D  Q++
Sbjct: 1   MFDSREKIALFIDGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS
Sbjct: 59  SSIRPLIDWLDYNGYKVVTKAAKEFTDSTGRRKVKGNMDIELTVDAMQLTDTVDHFVIFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL  LK EI RDP E 
Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSER 178


>gi|239831485|ref|ZP_04679814.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
 gi|239823752|gb|EEQ95320.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
          Length = 191

 Score =  193 bits (491), Expect = 7e-48,   Method: Composition-based stats.
 Identities = 113/181 (62%), Positives = 145/181 (80%), Gaps = 2/181 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MFD REKIALFIDGANLYA+SK LGFDIDYRKLLKAF+ R  ++RAYYYT +V D  Q++
Sbjct: 1   MFDSREKIALFIDGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS
Sbjct: 59  SSIRPLIDWLDYNGYKVVTKAAKEFTDSTGRRKVKGNMDIELTVDAMQLTDTVDHFVIFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F +L  ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL  LK EI RDP E 
Sbjct: 119 GDGDFRSLAEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSER 178

Query: 181 K 181
            
Sbjct: 179 P 179


>gi|300023756|ref|YP_003756367.1| hypothetical protein Hden_2248 [Hyphomicrobium denitrificans ATCC
           51888]
 gi|299525577|gb|ADJ24046.1| protein of unknown function DUF88 [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 213

 Score =  193 bits (491), Expect = 8e-48,   Method: Composition-based stats.
 Identities = 98/186 (52%), Positives = 139/186 (74%), Gaps = 7/186 (3%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
           F P E+IALFIDGANLYA++K+LGFDIDY++LL  FR +  ++RA YYT +  +  Q++S
Sbjct: 3   FYPTERIALFIDGANLYATAKSLGFDIDYKRLLGLFRQKGQLVRALYYTALAEE--QEYS 60

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
            + PL+DWL YNGF +V K  KEFT+  GR++VK +MD+EL VDA   ++ L+H+VIFSG
Sbjct: 61  SIRPLIDWLDYNGFSMVTKPTKEFTDATGRRKVKGNMDIELTVDAMLLADSLDHIVIFSG 120

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD----- 176
           DG F +LVAALQ+K K+V+++ST+ + P M +D+LRRQAD F+DLA L++++ R      
Sbjct: 121 DGDFRSLVAALQQKGKRVSVISTLQTQPPMVADELRRQADQFIDLADLEDQVGRAQNGRG 180

Query: 177 PDEDKK 182
           P E  +
Sbjct: 181 PRESSR 186


>gi|254718792|ref|ZP_05180603.1| hypothetical protein Bru83_04498 [Brucella sp. 83/13]
 gi|265983772|ref|ZP_06096507.1| conserved hypothetical protein [Brucella sp. 83/13]
 gi|306837511|ref|ZP_07470386.1| cytoplasmic protein [Brucella sp. NF 2653]
 gi|264662364|gb|EEZ32625.1| conserved hypothetical protein [Brucella sp. 83/13]
 gi|306407403|gb|EFM63607.1| cytoplasmic protein [Brucella sp. NF 2653]
          Length = 202

 Score =  193 bits (491), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 113/182 (62%), Positives = 146/182 (80%), Gaps = 2/182 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MFD REKI LFIDGANLYA+SK LGFDIDYRKLLKAF+ R  ++RAYYYT +V D  Q++
Sbjct: 1   MFDSREKIVLFIDGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS
Sbjct: 59  SSIRPLIDWLDYNGYKVVTKAAKEFTDSTGRRKVKGNMDIELTVDAMQLTDTVDHFVIFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL  LK EI RDP E 
Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSER 178

Query: 181 KK 182
            +
Sbjct: 179 AR 180


>gi|307313917|ref|ZP_07593532.1| protein of unknown function DUF88 [Sinorhizobium meliloti BL225C]
 gi|306899191|gb|EFN29829.1| protein of unknown function DUF88 [Sinorhizobium meliloti BL225C]
          Length = 196

 Score =  193 bits (490), Expect = 9e-48,   Method: Composition-based stats.
 Identities = 114/179 (63%), Positives = 147/179 (82%), Gaps = 2/179 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MFDPREKIALFIDGANL+A+SK+LGFDIDY KLL+AFR+RA ++RAYYYT ++ D   +F
Sbjct: 1   MFDPREKIALFIDGANLFAASKSLGFDIDYCKLLEAFRNRAYLLRAYYYTAIIEDL--EF 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S + PL+DWL YNG+ VV K AKEFT+  GR+++K +MD+ELA+DA EQS   +HLVIFS
Sbjct: 59  SSIRPLIDWLDYNGYTVVTKPAKEFTDAQGRRKIKGNMDIELAIDAMEQSRTADHLVIFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
           GDG FTTLV  LQRK +KV++VST+ + P M +D+LRRQAD+F+DLA L++EI R P +
Sbjct: 119 GDGDFTTLVETLQRKGRKVSVVSTMSTQPPMIADELRRQADHFIDLASLRSEIDRHPRD 177


>gi|307946592|ref|ZP_07661927.1| RtsE [Roseibium sp. TrichSKD4]
 gi|307770256|gb|EFO29482.1| RtsE [Roseibium sp. TrichSKD4]
          Length = 194

 Score =  193 bits (490), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 104/181 (57%), Positives = 146/181 (80%), Gaps = 2/181 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MFD REK+ALFIDGANLY+++KA+GFDIDY++LLK F+ +A ++RAYYYT ++ D  Q++
Sbjct: 1   MFDAREKVALFIDGANLYSTAKAIGFDIDYKRLLKEFQGQAYLLRAYYYTALIED--QEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S + PL+DWL YNG++V+ K  KEF ++ GR++VK +MD+ELAVDA +Q E ++H+V+FS
Sbjct: 59  SSIRPLIDWLDYNGYKVITKPVKEFVDSTGRRKVKGNMDIELAVDAMQQVEHVDHIVLFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F +LV ALQR+ +KV++VST+ + P M +D LRRQAD+F+DLA L N+I RDP E 
Sbjct: 119 GDGDFRSLVEALQRRGRKVSVVSTLKTQPPMIADDLRRQADHFIDLASLANKIGRDPSER 178

Query: 181 K 181
            
Sbjct: 179 P 179


>gi|62289609|ref|YP_221402.1| hypothetical protein BruAb1_0666 [Brucella abortus bv. 1 str.
           9-941]
 gi|82699537|ref|YP_414111.1| hypothetical protein BAB1_0669 [Brucella melitensis biovar Abortus
           2308]
 gi|189023863|ref|YP_001934631.1| hypothetical protein BAbS19_I06260 [Brucella abortus S19]
 gi|237815104|ref|ZP_04594102.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
 gi|254688926|ref|ZP_05152180.1| hypothetical protein Babob68_01821 [Brucella abortus bv. 6 str.
           870]
 gi|254693408|ref|ZP_05155236.1| hypothetical protein Babob3T_01839 [Brucella abortus bv. 3 str.
           Tulya]
 gi|254697060|ref|ZP_05158888.1| hypothetical protein Babob28_04920 [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254729957|ref|ZP_05188535.1| hypothetical protein Babob42_01839 [Brucella abortus bv. 4 str.
           292]
 gi|256257174|ref|ZP_05462710.1| hypothetical protein Babob9C_07408 [Brucella abortus bv. 9 str.
           C68]
 gi|260545634|ref|ZP_05821375.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
 gi|260754412|ref|ZP_05866760.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
 gi|260757631|ref|ZP_05869979.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
 gi|260761458|ref|ZP_05873801.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260883440|ref|ZP_05895054.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
 gi|261213658|ref|ZP_05927939.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
 gi|297248021|ref|ZP_06931739.1| conserved hypothetical protein [Brucella abortus bv. 5 str. B3196]
 gi|62195741|gb|AAX74041.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
 gi|82615638|emb|CAJ10625.1| Protein of unknown function DUF88 [Brucella melitensis biovar
           Abortus 2308]
 gi|189019435|gb|ACD72157.1| Protein of unknown function DUF88 [Brucella abortus S19]
 gi|237789941|gb|EEP64151.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
 gi|260097041|gb|EEW80916.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
 gi|260667949|gb|EEX54889.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
 gi|260671890|gb|EEX58711.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260674520|gb|EEX61341.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
 gi|260872968|gb|EEX80037.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
 gi|260915265|gb|EEX82126.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
 gi|297175190|gb|EFH34537.1| conserved hypothetical protein [Brucella abortus bv. 5 str. B3196]
          Length = 191

 Score =  193 bits (490), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 113/180 (62%), Positives = 146/180 (81%), Gaps = 2/180 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MFD REKIALFIDGANLYA+SK LGFDIDYRKLLKAF+ R  ++RAYYYT +V D  Q++
Sbjct: 1   MFDSREKIALFIDGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S + PL+DWL YNG++VV K A+EFT++ GR++VK +MD+EL VDA + ++ ++H VIFS
Sbjct: 59  SSIRPLIDWLDYNGYKVVTKAAREFTDSTGRRKVKGNMDIELTVDAMQLTDTVDHFVIFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL  LK EI RDP E 
Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSER 178


>gi|307322278|ref|ZP_07601643.1| protein of unknown function DUF88 [Sinorhizobium meliloti AK83]
 gi|306892060|gb|EFN22881.1| protein of unknown function DUF88 [Sinorhizobium meliloti AK83]
          Length = 196

 Score =  192 bits (489), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 114/179 (63%), Positives = 147/179 (82%), Gaps = 2/179 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MFDPREKIALFIDGANL+A+SK+LGFDIDY KLL+AFR+RA ++RAYYYT ++ D   +F
Sbjct: 1   MFDPREKIALFIDGANLFAASKSLGFDIDYCKLLQAFRNRAYLLRAYYYTAIIEDL--EF 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S + PL+DWL YNG+ VV K AKEFT+  GR+++K +MD+ELA+DA EQS   +HLVIFS
Sbjct: 59  SSIRPLIDWLDYNGYTVVTKPAKEFTDAQGRRKIKGNMDIELAIDAMEQSRTADHLVIFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
           GDG FTTLV  LQRK +KV++VST+ + P M +D+LRRQAD+F+DLA L++EI R P +
Sbjct: 119 GDGDFTTLVETLQRKGRKVSVVSTMSTQPPMIADELRRQADHFIDLASLRSEIDRHPRD 177


>gi|182679399|ref|YP_001833545.1| hypothetical protein Bind_2447 [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|182635282|gb|ACB96056.1| protein of unknown function DUF88 [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 203

 Score =  192 bits (488), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 101/180 (56%), Positives = 142/180 (78%), Gaps = 3/180 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M  P E+IALFIDGANLYA++K+LGFDIDY++LLK F+S+  +IRA+YYT +V D  Q++
Sbjct: 1   MSHP-ERIALFIDGANLYATAKSLGFDIDYKRLLKEFQSKGKLIRAFYYTALVED--QEY 57

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S + PL+DWL YNG+ VV K  KEF ++ GR++VK +MD+ELAVDA E +E L+H+V+FS
Sbjct: 58  SSIRPLIDWLDYNGYSVVTKPTKEFVDSLGRRKVKGNMDIELAVDAMEMAEHLDHIVLFS 117

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F +LV A+QRK  +V++VST  + P+M +D+LRRQAD F+DL +L ++I R+ +E 
Sbjct: 118 GDGDFRSLVEAVQRKGVRVSVVSTNTTQPAMVADELRRQADEFIDLIHLASKIGREQNER 177


>gi|89053002|ref|YP_508453.1| hypothetical protein Jann_0511 [Jannaschia sp. CCS1]
 gi|88862551|gb|ABD53428.1| protein of unknown function DUF88 [Jannaschia sp. CCS1]
          Length = 191

 Score =  192 bits (488), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 94/174 (54%), Positives = 127/174 (72%), Gaps = 2/174 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MF   E++ALFIDG+NLYA++KALGFDIDY+ L   F  R  ++RA YYT ++ +    +
Sbjct: 1   MFYRDERLALFIDGSNLYAAAKALGFDIDYKLLRSEFMQRGKLLRANYYTALLEN--DDY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           SP+ PL+DWLHYNGF +V K AKEF ++ GR++VK +MD+ELAVDA E +  ++H+VIFS
Sbjct: 59  SPIRPLVDWLHYNGFNMVTKPAKEFVDSQGRRKVKGNMDIELAVDAMETAPHVDHIVIFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
           GDG F  LV +LQRK  +V++VST+ S P M +D LRRQ D F++L  LK  I 
Sbjct: 119 GDGDFRPLVESLQRKGCRVSVVSTIRSQPPMIADDLRRQCDNFIELLDLKEAIG 172


>gi|163852608|ref|YP_001640651.1| hypothetical protein Mext_3193 [Methylobacterium extorquens PA1]
 gi|218531449|ref|YP_002422265.1| hypothetical protein Mchl_3517 [Methylobacterium chloromethanicum
           CM4]
 gi|254562365|ref|YP_003069460.1| hypothetical protein METDI3980 [Methylobacterium extorquens DM4]
 gi|163664213|gb|ABY31580.1| protein of unknown function DUF88 [Methylobacterium extorquens PA1]
 gi|218523752|gb|ACK84337.1| protein of unknown function DUF88 [Methylobacterium
           chloromethanicum CM4]
 gi|254269643|emb|CAX25615.1| conserved hypothethical protein (DUF88) [Methylobacterium
           extorquens DM4]
          Length = 218

 Score =  192 bits (487), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 98/180 (54%), Positives = 142/180 (78%), Gaps = 3/180 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M D  ++ A+FIDGANLYA++KALGFDIDY++LLK F+SR  +IRA+YYT ++ D  Q++
Sbjct: 1   MSDK-QRTAVFIDGANLYATTKALGFDIDYKRLLKDFQSRDNLIRAFYYTAMIED--QEY 57

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S + PL+DWL YNG++VV K  KEFT++ GR+++K +MD+ELA+DA E +  ++H+V+FS
Sbjct: 58  SSIRPLIDWLDYNGYRVVTKPVKEFTDSAGRRKIKGNMDIELAIDALELAPHIDHMVLFS 117

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F +LV A+QR+  +V++VST+ + P+M +D LRRQAD F+DLA+L + I RDP E 
Sbjct: 118 GDGDFRSLVEAIQRRGVRVSVVSTIQTQPAMIADDLRRQADEFIDLAHLASRIGRDPSER 177


>gi|114706254|ref|ZP_01439156.1| hypothetical protein FP2506_00680 [Fulvimarina pelagi HTCC2506]
 gi|114538115|gb|EAU41237.1| hypothetical protein FP2506_00680 [Fulvimarina pelagi HTCC2506]
          Length = 199

 Score =  191 bits (486), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 108/180 (60%), Positives = 141/180 (78%), Gaps = 2/180 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MFD REKIALFIDGANLYA+S+ LGFDIDY+K+L  F  +A ++RAYYYT ++ D  Q++
Sbjct: 1   MFDQREKIALFIDGANLYAASRNLGFDIDYKKMLTFFEKKAYLLRAYYYTALIED--QEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S + PL+DWL YNG++VV K AKEFT+  GR++VK +MD+ELA+DA E S+ ++H V+FS
Sbjct: 59  SSIRPLIDWLDYNGYRVVTKPAKEFTDQTGRRKVKGNMDIELAIDAMELSDTVDHFVLFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F +LV ALQRK +KV++VST+ + P M SD LRRQAD+F+DL  LKNEI R   E 
Sbjct: 119 GDGDFRSLVDALQRKGRKVSVVSTLATQPPMISDDLRRQADHFIDLTSLKNEIGRSQAER 178


>gi|153009965|ref|YP_001371180.1| hypothetical protein Oant_2638 [Ochrobactrum anthropi ATCC 49188]
 gi|151561853|gb|ABS15351.1| protein of unknown function DUF88 [Ochrobactrum anthropi ATCC
           49188]
          Length = 191

 Score =  191 bits (486), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 113/180 (62%), Positives = 145/180 (80%), Gaps = 2/180 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MFD REKIALFIDGANLYA+SK LGFDIDYRKLLKAF+ R  ++RAYYYT +V D  Q++
Sbjct: 1   MFDSREKIALFIDGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS
Sbjct: 59  SSIRPLIDWLDYNGYKVVTKAAKEFTDSTGRRKVKGNMDIELTVDAMQLTDTVDHFVIFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F +L  ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL  LK EI RDP E 
Sbjct: 119 GDGDFRSLAEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSER 178


>gi|299135108|ref|ZP_07028299.1| protein of unknown function DUF88 [Afipia sp. 1NLS2]
 gi|298590085|gb|EFI50289.1| protein of unknown function DUF88 [Afipia sp. 1NLS2]
          Length = 212

 Score =  191 bits (486), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 99/180 (55%), Positives = 137/180 (76%), Gaps = 2/180 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M  P  KIALFIDGANLYA++K LGFDIDY++LL  F++R  ++RA+YYT ++ D  Q++
Sbjct: 1   MTSPSHKIALFIDGANLYATAKTLGFDIDYKRLLLEFQNRGTLVRAFYYTAIIED--QEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S + PL+DWL YNG+ VV K  KEF +  GR++VK +MD+ELAVDA E +E ++H+V+FS
Sbjct: 59  SSIRPLIDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDHMVLFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F +LV A+QR+  +VT+VST+ S P M +D+LRRQAD F DL  L++++ RDP E 
Sbjct: 119 GDGDFRSLVEAVQRRGVRVTVVSTISSQPPMIADELRRQADVFTDLVQLQSKLGRDPGER 178


>gi|188582630|ref|YP_001926075.1| hypothetical protein Mpop_3389 [Methylobacterium populi BJ001]
 gi|179346128|gb|ACB81540.1| protein of unknown function DUF88 [Methylobacterium populi BJ001]
          Length = 217

 Score =  191 bits (485), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 99/181 (54%), Positives = 141/181 (77%), Gaps = 3/181 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M D  ++ A+FIDGANLYA++KALGFDIDY++LLK F+SR  +IRA+YYT ++ D  Q++
Sbjct: 1   MSDK-QRTAVFIDGANLYATTKALGFDIDYKRLLKDFQSRDNLIRAFYYTAMIED--QEY 57

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S + PL+DWL YNG++VV K  KEFT++ GR++VK +MD+ELA+DA E +  ++H+V+FS
Sbjct: 58  SSIRPLIDWLDYNGYRVVTKPVKEFTDSAGRRKVKGNMDIELAIDALELAPYIDHMVLFS 117

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F +LV A+QR+  +V++VST+ + P+M +D LRRQAD F+DLA+L   I RDP E 
Sbjct: 118 GDGDFRSLVEAIQRRGVRVSVVSTIQTQPAMIADDLRRQADEFIDLAHLAGRIGRDPSER 177

Query: 181 K 181
            
Sbjct: 178 P 178


>gi|110633298|ref|YP_673506.1| hypothetical protein Meso_0944 [Mesorhizobium sp. BNC1]
 gi|110284282|gb|ABG62341.1| protein of unknown function DUF88 [Chelativorans sp. BNC1]
          Length = 194

 Score =  191 bits (485), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 111/181 (61%), Positives = 146/181 (80%), Gaps = 2/181 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MFDPREKIA+FIDGANLYA+S++LGFDIDYRKLL +F+ RA ++RAYYYT +V D  Q++
Sbjct: 1   MFDPREKIAMFIDGANLYATSRSLGFDIDYRKLLASFQKRAYLLRAYYYTALVED--QEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+EL +DA    + ++H VIFS
Sbjct: 59  SSIRPLIDWLDYNGYKVVTKPAKEFTDSTGRRKIKGNMDIELTIDALGLVDVVDHYVIFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F TLV ALQR+ +KV+IVST+ S P M SD+LRRQAD+F+DLA L+ E+ RDP E 
Sbjct: 119 GDGDFRTLVEALQRRGRKVSIVSTIQSQPPMISDELRRQADHFIDLATLQTEVGRDPSER 178

Query: 181 K 181
            
Sbjct: 179 P 179


>gi|256159377|ref|ZP_05457159.1| hypothetical protein BcetM4_10523 [Brucella ceti M490/95/1]
 gi|256254675|ref|ZP_05460211.1| hypothetical protein BcetB_10340 [Brucella ceti B1/94]
 gi|261221851|ref|ZP_05936132.1| conserved hypothetical protein [Brucella ceti B1/94]
 gi|265997815|ref|ZP_06110372.1| conserved hypothetical protein [Brucella ceti M490/95/1]
 gi|260920435|gb|EEX87088.1| conserved hypothetical protein [Brucella ceti B1/94]
 gi|262552283|gb|EEZ08273.1| conserved hypothetical protein [Brucella ceti M490/95/1]
          Length = 191

 Score =  191 bits (485), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 112/180 (62%), Positives = 144/180 (80%), Gaps = 2/180 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MFD REKIALFIDGANLYA+SK LGFDIDYRKLLKAF+ R  ++RAYYYT +V D  Q++
Sbjct: 1   MFDSREKIALFIDGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S + P +DWL YNG++V  K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS
Sbjct: 59  SSIRPFIDWLDYNGYKVGTKAAKEFTDSTGRRKVKGNMDIELTVDAKQLTDTVDHFVIFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL  LK EI RDP E 
Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSER 178


>gi|23501536|ref|NP_697663.1| hypothetical protein BR0649 [Brucella suis 1330]
 gi|161618620|ref|YP_001592507.1| hypothetical protein BCAN_A0662 [Brucella canis ATCC 23365]
 gi|163842921|ref|YP_001627325.1| hypothetical protein BSUIS_A0677 [Brucella suis ATCC 23445]
 gi|254703984|ref|ZP_05165812.1| hypothetical protein Bsuib36_08664 [Brucella suis bv. 3 str. 686]
 gi|260566769|ref|ZP_05837239.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
 gi|261754636|ref|ZP_05998345.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
 gi|23347446|gb|AAN29578.1| conserved hypothetical protein [Brucella suis 1330]
 gi|161335431|gb|ABX61736.1| Hypothetical protein BCAN_A0662 [Brucella canis ATCC 23365]
 gi|163673644|gb|ABY37755.1| Hypothetical protein BSUIS_A0677 [Brucella suis ATCC 23445]
 gi|260156287|gb|EEW91367.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
 gi|261744389|gb|EEY32315.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
          Length = 191

 Score =  191 bits (485), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 113/180 (62%), Positives = 146/180 (81%), Gaps = 2/180 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MFD REKIALFI+GANLYA+SK LGFDIDYRKLLKAF+ R  ++RAYYYT +V D  Q++
Sbjct: 1   MFDSREKIALFINGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS
Sbjct: 59  SSIRPLIDWLDYNGYKVVTKAAKEFTDSTGRRKVKGNMDIELTVDAMQLTDTVDHFVIFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL  LK EI RDP E 
Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSER 178


>gi|315122349|ref|YP_004062838.1| hypothetical protein CKC_03005 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495751|gb|ADR52350.1| hypothetical protein CKC_03005 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 205

 Score =  191 bits (484), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 149/176 (84%), Positives = 168/176 (95%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MFDPREKIALFIDGANLYA+SKALGFDIDYRKLLKAF++RA V+RAYYYTTV+GD +QQ+
Sbjct: 1   MFDPREKIALFIDGANLYAASKALGFDIDYRKLLKAFKARARVLRAYYYTTVLGDSDQQY 60

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           SPLHPLLDWLHYNGF+VV+KVAKEFTE+CGRK++K+SMDVELAVDAFEQSEG++HLVIFS
Sbjct: 61  SPLHPLLDWLHYNGFKVVSKVAKEFTESCGRKKIKASMDVELAVDAFEQSEGIDHLVIFS 120

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
           GDG F TLV ALQRK KKVTIVSTVLS+PSM SDQLRRQAD+F+DLAYLKNEI R+
Sbjct: 121 GDGDFATLVEALQRKSKKVTIVSTVLSNPSMVSDQLRRQADHFIDLAYLKNEIQRE 176


>gi|296444871|ref|ZP_06886833.1| protein of unknown function DUF88 [Methylosinus trichosporium OB3b]
 gi|296257539|gb|EFH04604.1| protein of unknown function DUF88 [Methylosinus trichosporium OB3b]
          Length = 202

 Score =  190 bits (483), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 101/182 (55%), Positives = 143/182 (78%), Gaps = 3/182 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M DP E+IALFIDGANLYA++K+LGFDIDY++LL+ F+SR  +IRA+YYT ++ D  Q++
Sbjct: 1   MADP-ERIALFIDGANLYATAKSLGFDIDYKRLLREFQSRGRLIRAFYYTALIED--QEY 57

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S + PL+DWL YNG+ VV K  KEF ++ GR++VK +MD+ELAVDA E +E ++HLV+FS
Sbjct: 58  SSIRPLIDWLDYNGYAVVTKPTKEFVDSLGRRKVKGNMDIELAVDAMEMAEHIDHLVLFS 117

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F +LV A+QRK  +V+++ST+ + P M +D+LRRQ+D F+DL +L  +I RDP E 
Sbjct: 118 GDGDFRSLVEAVQRKGVRVSVISTITTQPPMIADELRRQSDEFVDLIHLVGKIGRDPGER 177

Query: 181 KK 182
            +
Sbjct: 178 AE 179


>gi|323137551|ref|ZP_08072628.1| protein of unknown function DUF88 [Methylocystis sp. ATCC 49242]
 gi|322397177|gb|EFX99701.1| protein of unknown function DUF88 [Methylocystis sp. ATCC 49242]
          Length = 203

 Score =  190 bits (483), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 96/177 (54%), Positives = 140/177 (79%), Gaps = 2/177 (1%)

Query: 6   EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
           E+IALFIDGANLYA++K+LGFDIDY++LL+ F+ +  +IRA+YYT ++ D  Q++S + P
Sbjct: 5   ERIALFIDGANLYATAKSLGFDIDYKRLLREFQGKGRLIRAFYYTALIED--QEYSSIRP 62

Query: 66  LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
           L+DWL YNG+ VV K  KEF ++ GR++VK +MD+ELAVDA E +E ++H+V+FSGDG F
Sbjct: 63  LIDWLDYNGYAVVTKPTKEFVDSLGRRKVKGNMDIELAVDAMEMAEHIDHMVLFSGDGDF 122

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182
            +LV A+QRK  +V+++ST+ + P M +D+LRRQAD F+DL +L ++I RDP E  +
Sbjct: 123 RSLVEAVQRKGVRVSVISTITTQPPMIADELRRQADEFIDLIHLVSKIGRDPGERAE 179


>gi|254713779|ref|ZP_05175590.1| hypothetical protein BcetM6_10570 [Brucella ceti M644/93/1]
 gi|254717164|ref|ZP_05178975.1| hypothetical protein BcetM_12234 [Brucella ceti M13/05/1]
 gi|261218981|ref|ZP_05933262.1| conserved hypothetical protein [Brucella ceti M13/05/1]
 gi|261321520|ref|ZP_05960717.1| conserved hypothetical protein [Brucella ceti M644/93/1]
 gi|260924070|gb|EEX90638.1| conserved hypothetical protein [Brucella ceti M13/05/1]
 gi|261294210|gb|EEX97706.1| conserved hypothetical protein [Brucella ceti M644/93/1]
          Length = 191

 Score =  190 bits (483), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 114/180 (63%), Positives = 146/180 (81%), Gaps = 2/180 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MFD REKIALFIDGANLYA+SK LGFDIDYRKLLKAF+ R  ++RAYYYT +V D  Q++
Sbjct: 1   MFDSREKIALFIDGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS
Sbjct: 59  SSIRPLIDWLDYNGYKVVTKAAKEFTDSTGRRKVKGNMDIELTVDAKQLTDTVDHFVIFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL  LK EI RDP E 
Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSER 178


>gi|146341383|ref|YP_001206431.1| hypothetical protein BRADO4470 [Bradyrhizobium sp. ORS278]
 gi|146194189|emb|CAL78210.1| conserved hypothetical protein with DNA-binding domain (DUF88)
           [Bradyrhizobium sp. ORS278]
          Length = 216

 Score =  189 bits (481), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 98/181 (54%), Positives = 136/181 (75%), Gaps = 2/181 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M     KIALFIDGANLYA++K LGFDIDY++LLK F+SR  ++RA+YYT ++ D  Q++
Sbjct: 1   MSSSTNKIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLLRAFYYTAIIED--QEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S + PL+DWL YNG+ VV K  KEF +  GR++VK +MD+ELAVDA E +E ++ +V+FS
Sbjct: 59  SSIRPLIDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F +LV A+QR+  +VT++ST+ S P M +D+LRRQAD F DL  L++++ RDP E 
Sbjct: 119 GDGDFRSLVEAMQRRGVRVTVISTISSQPPMIADELRRQADVFTDLVELQSKLGRDPSER 178

Query: 181 K 181
            
Sbjct: 179 P 179


>gi|225627151|ref|ZP_03785189.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
 gi|254707641|ref|ZP_05169469.1| hypothetical protein BpinM_11896 [Brucella pinnipedialis
           M163/99/10]
 gi|254709777|ref|ZP_05171588.1| hypothetical protein BpinB_05796 [Brucella pinnipedialis B2/94]
 gi|256031267|ref|ZP_05444881.1| hypothetical protein BpinM2_11548 [Brucella pinnipedialis
           M292/94/1]
 gi|260168403|ref|ZP_05755214.1| hypothetical protein BruF5_08553 [Brucella sp. F5/99]
 gi|261315135|ref|ZP_05954332.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
 gi|261317309|ref|ZP_05956506.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
 gi|261757864|ref|ZP_06001573.1| conserved hypothetical protein [Brucella sp. F5/99]
 gi|265988348|ref|ZP_06100905.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
 gi|225617986|gb|EEH15030.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
 gi|261296532|gb|EEY00029.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
 gi|261304161|gb|EEY07658.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
 gi|261737848|gb|EEY25844.1| conserved hypothetical protein [Brucella sp. F5/99]
 gi|264660545|gb|EEZ30806.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
          Length = 191

 Score =  189 bits (481), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 113/180 (62%), Positives = 145/180 (80%), Gaps = 2/180 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MFD REKIALFIDGANLYA+SK LGFDIDYRKLLKAF+ R  ++RAYYYT +V D  Q++
Sbjct: 1   MFDSREKIALFIDGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S + PL+DWL YNG++V  K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS
Sbjct: 59  SSIRPLIDWLDYNGYKVGTKAAKEFTDSTGRRKVKGNMDIELTVDAKQLTDTVDHFVIFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL  LK EI RDP E 
Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSER 178


>gi|254701438|ref|ZP_05163266.1| hypothetical protein Bsuib55_11349 [Brucella suis bv. 5 str. 513]
 gi|261751977|ref|ZP_05995686.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
 gi|261741730|gb|EEY29656.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
          Length = 191

 Score =  189 bits (481), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 112/180 (62%), Positives = 145/180 (80%), Gaps = 2/180 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MFD REKIALFI+GANLY +SK LGFDIDYRKLLKAF+ R  ++RAYYYT +V D  Q++
Sbjct: 1   MFDSREKIALFINGANLYTASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS
Sbjct: 59  SSIRPLIDWLDYNGYKVVTKAAKEFTDSTGRRKVKGNMDLELTVDAMQLTDTVDHFVIFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL  LK EI RDP E 
Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSER 178


>gi|312114934|ref|YP_004012530.1| hypothetical protein Rvan_2206 [Rhodomicrobium vannielii ATCC
           17100]
 gi|311220063|gb|ADP71431.1| hypothetical protein Rvan_2206 [Rhodomicrobium vannielii ATCC
           17100]
          Length = 210

 Score =  189 bits (480), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 98/177 (55%), Positives = 136/177 (76%), Gaps = 2/177 (1%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
           F   E+IALFIDGANLYA++KALGFDIDY++LL  FR++ +++RA YYT +  +  Q++S
Sbjct: 3   FYTTERIALFIDGANLYATAKALGFDIDYKRLLNLFRNKGVLLRALYYTALAEE--QEYS 60

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
            + PL+DWL YNG+ +V K  KEFT+  GR+++K +MD+ELAVDA E SE L+H+++FSG
Sbjct: 61  SIRPLIDWLDYNGYSMVTKPTKEFTDASGRRKIKGNMDIELAVDAMELSEHLDHIILFSG 120

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
           DG F TLV ALQ K K+V++VST+ + P M +D+LRRQAD F+DLA L+ +I R   
Sbjct: 121 DGDFRTLVEALQHKGKRVSVVSTLTTQPPMVADELRRQADQFIDLADLQKDICRTQR 177


>gi|154253305|ref|YP_001414129.1| hypothetical protein Plav_2865 [Parvibaculum lavamentivorans DS-1]
 gi|154157255|gb|ABS64472.1| protein of unknown function DUF88 [Parvibaculum lavamentivorans
           DS-1]
          Length = 206

 Score =  189 bits (480), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 99/181 (54%), Positives = 141/181 (77%), Gaps = 2/181 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           +F P E+IALFIDGANLY++++ LGFDIDY++LL  FRS+ +++RA+YYT ++ D  Q++
Sbjct: 2   IFYPNERIALFIDGANLYSAARGLGFDIDYKRLLDHFRSKGVLVRAFYYTALLED--QEY 59

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           SPL PL+DWL YNG+ VV K AKEFT+  GR+R+K +MD+ELA+DA E ++ L+HLV+FS
Sbjct: 60  SPLRPLIDWLDYNGYAVVTKPAKEFTDATGRRRIKGNMDIELAIDALEIADKLDHLVLFS 119

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F  LV A+QRK K+VT+VST+ S P M +D+LRRQAD +++L  +++ I R   + 
Sbjct: 120 GDGDFRRLVDAVQRKGKRVTVVSTMRSQPPMIADELRRQADQYVELESMRDAIGRSHSDR 179

Query: 181 K 181
            
Sbjct: 180 P 180


>gi|90424132|ref|YP_532502.1| hypothetical protein RPC_2633 [Rhodopseudomonas palustris BisB18]
 gi|90106146|gb|ABD88183.1| protein of unknown function DUF88 [Rhodopseudomonas palustris
           BisB18]
          Length = 208

 Score =  189 bits (480), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 98/181 (54%), Positives = 136/181 (75%), Gaps = 2/181 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M     KIALFIDGANLYA++K LGFDIDY++LLK F+SR  ++RA+YYT ++ D  Q++
Sbjct: 1   MSSASSKIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLVRAFYYTAIIED--QEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S + PL+DWL YNG+ VV K  KEF +  GR++VK +MD+ELAVDA E +E ++ +V+FS
Sbjct: 59  SSIRPLIDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F +LV A+QR+  +VT++ST+ S P M +D+LRRQAD F DL  L++++ RDP E 
Sbjct: 119 GDGDFRSLVEAVQRRGVRVTVISTISSQPPMIADELRRQADVFTDLVELQSKLGRDPAER 178

Query: 181 K 181
            
Sbjct: 179 P 179


>gi|90420856|ref|ZP_01228761.1| conserved hypothetical protein [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90334831|gb|EAS48603.1| conserved hypothetical protein [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 201

 Score =  189 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 109/177 (61%), Positives = 143/177 (80%), Gaps = 2/177 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MFD REKIALFIDGANLYA+S+ LGFDIDY+K+L++F +R  ++RAYYYT +V D   ++
Sbjct: 1   MFDQREKIALFIDGANLYAASRGLGFDIDYKKMLRSFEARGYLLRAYYYTALVED--NEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S + PL+DWL YNG++VV K A+EFT+  GR+R+K +MD+ELAVDA E  + ++H V+FS
Sbjct: 59  SSIRPLIDWLDYNGYRVVTKPAREFTDASGRRRIKGNMDIELAVDAMELVDTVDHFVLFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
           GDG F +LVAALQRK +KV++VST+ S P M SD LRRQAD+F++LA LK EI RDP
Sbjct: 119 GDGDFRSLVAALQRKGRKVSVVSTLTSSPPMISDDLRRQADHFIELANLKAEIGRDP 175


>gi|92117780|ref|YP_577509.1| hypothetical protein Nham_2257 [Nitrobacter hamburgensis X14]
 gi|91800674|gb|ABE63049.1| protein of unknown function DUF88 [Nitrobacter hamburgensis X14]
          Length = 206

 Score =  189 bits (480), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 99/180 (55%), Positives = 135/180 (75%), Gaps = 2/180 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M     KIALFIDGANLYA++K LGFDIDY++LLK F+SR  ++RA+YYT ++ D  Q++
Sbjct: 1   MSSASNKIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLVRAFYYTAIIED--QEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S + PL+DWL YNG+ VV K  KEF +  GR++VK +MD+ELAVDA E +E ++ +V+FS
Sbjct: 59  SSIRPLIDWLDYNGYTVVTKATKEFVDASGRRKVKGNMDIELAVDAMELAEHVDQIVLFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F +LV A+QR+  +VT+VST+ S P M +D+LRRQAD F DL  L+ ++ RDP E 
Sbjct: 119 GDGDFRSLVEAVQRRGVRVTVVSTISSQPPMIADELRRQADVFTDLVELQPKLGRDPSER 178


>gi|227820632|ref|YP_002824602.1| hypothetical protein NGR_c00450 [Sinorhizobium fredii NGR234]
 gi|227339631|gb|ACP23849.1| conserved hypothetical protein [Sinorhizobium fredii NGR234]
          Length = 191

 Score =  189 bits (479), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 114/182 (62%), Positives = 145/182 (79%), Gaps = 2/182 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MFD REKIALFIDGANLYA+SK+LGFDIDYRKLL AF+ RA ++RAYYYT ++ D   +F
Sbjct: 1   MFDSREKIALFIDGANLYATSKSLGFDIDYRKLLSAFQKRAYLVRAYYYTALIEDL--EF 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S + PL+DWL YNG+ VV K AKEFT+  GR+++K SMDVELA+DA EQ + ++H V+FS
Sbjct: 59  SSIRPLIDWLDYNGYTVVTKPAKEFTDALGRRKIKGSMDVELAIDALEQRQVVDHYVLFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG FTTLVAALQR  +KVT+VST+ + P M +D+LRRQAD+F+DL  L++EI R P   
Sbjct: 119 GDGNFTTLVAALQRNGRKVTVVSTLSTQPPMIADELRRQADHFIDLIALRSEIDRHPQAA 178

Query: 181 KK 182
            +
Sbjct: 179 PQ 180


>gi|17987581|ref|NP_540215.1| putative cytoplasmic protein [Brucella melitensis bv. 1 str. 16M]
 gi|225852170|ref|YP_002732403.1| hypothetical protein BMEA_A0686 [Brucella melitensis ATCC 23457]
 gi|256044347|ref|ZP_05447251.1| hypothetical protein Bmelb1R_07603 [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|256113190|ref|ZP_05454058.1| hypothetical protein Bmelb3E_10777 [Brucella melitensis bv. 3 str.
           Ether]
 gi|256264318|ref|ZP_05466850.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
           63/9]
 gi|260563699|ref|ZP_05834185.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
 gi|265990761|ref|ZP_06103318.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|265994597|ref|ZP_06107154.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|17983287|gb|AAL52479.1| hypothetical cytosolic protein [Brucella melitensis bv. 1 str. 16M]
 gi|225640535|gb|ACO00449.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457]
 gi|260153715|gb|EEW88807.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
 gi|262765710|gb|EEZ11499.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|263001545|gb|EEZ14120.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|263094592|gb|EEZ18390.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
           63/9]
 gi|326408671|gb|ADZ65736.1| putative cytoplasmic protein [Brucella melitensis M28]
 gi|326538396|gb|ADZ86611.1| conserved hypothetical protein [Brucella melitensis M5-90]
          Length = 191

 Score =  189 bits (479), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 112/180 (62%), Positives = 145/180 (80%), Gaps = 2/180 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MFD REKIALFIDGANLYA+SK LGFDIDYRKLLKAF+ R  ++RAYYYT +V D  Q++
Sbjct: 1   MFDSREKIALFIDGANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S + PL+DWL YNG++VV K A+EFT++ GR++VK +MD+EL VDA + ++ ++H VIFS
Sbjct: 59  SSIRPLIDWLDYNGYKVVTKAAREFTDSTGRRKVKGNMDIELTVDAMQLTDTVDHFVIFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           G G F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL  LK EI RDP E 
Sbjct: 119 GYGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSER 178


>gi|294852014|ref|ZP_06792687.1| hypothetical protein BAZG_00929 [Brucella sp. NVSL 07-0026]
 gi|294820603|gb|EFG37602.1| hypothetical protein BAZG_00929 [Brucella sp. NVSL 07-0026]
          Length = 191

 Score =  188 bits (478), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 112/180 (62%), Positives = 144/180 (80%), Gaps = 2/180 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MF  REKIALFID ANLYA+SK LGFDIDYRKLLKAF+ R  ++RAYYYT +V D  Q++
Sbjct: 1   MFGSREKIALFIDDANLYAASKTLGFDIDYRKLLKAFQKRGYLLRAYYYTALVED--QEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+EL VDA + ++ ++H VIFS
Sbjct: 59  SSIRPLIDWLDYNGYKVVTKAAKEFTDSTGRRKVKGNMDIELTVDAMQLTDTVDHFVIFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F +LV ALQRK +KV++VST+ + P+M SD+LRRQAD+F+DL  LK EI RDP E 
Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLTTQPAMISDELRRQADHFIDLVSLKAEIGRDPSER 178


>gi|75676115|ref|YP_318536.1| hypothetical protein Nwi_1924 [Nitrobacter winogradskyi Nb-255]
 gi|74420985|gb|ABA05184.1| Protein of unknown function DUF88 [Nitrobacter winogradskyi Nb-255]
          Length = 205

 Score =  188 bits (478), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 99/181 (54%), Positives = 136/181 (75%), Gaps = 2/181 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M     KIALFIDGANLYA++K LGFDIDY++LLK F+SR  ++RA+YYT ++ D  Q++
Sbjct: 1   MPSASNKIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLVRAFYYTAIIED--QEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S + PL+DWL YNG+ VV K  KEF +  GR++VK +MD+ELAVDA E +E ++ +V+FS
Sbjct: 59  SSIRPLIDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHVDQIVLFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F +LV A+QR+  +VT+VST+ S P M +D+LRRQAD F DL  L+ ++ RDP E 
Sbjct: 119 GDGDFRSLVEAVQRRGVRVTVVSTIASQPPMIADELRRQADVFTDLVELQPKLGRDPSER 178

Query: 181 K 181
           +
Sbjct: 179 Q 179


>gi|154247759|ref|YP_001418717.1| hypothetical protein Xaut_3836 [Xanthobacter autotrophicus Py2]
 gi|154161844|gb|ABS69060.1| protein of unknown function DUF88 [Xanthobacter autotrophicus Py2]
          Length = 202

 Score =  188 bits (478), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 101/176 (57%), Positives = 142/176 (80%), Gaps = 2/176 (1%)

Query: 6   EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
           EKIAL IDGANLY+++KALGFDIDY++LLK F+SR  ++RA+YYTT++ D  Q++S + P
Sbjct: 5   EKIALLIDGANLYSATKALGFDIDYKRLLKEFQSRGYLLRAFYYTTLIED--QEYSSIRP 62

Query: 66  LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
           LLDWL YNG+ VV K+A+EFT++ GR+RV+ +MD+E+AVDA E +E ++H+V+FSGDG F
Sbjct: 63  LLDWLDYNGYAVVTKLAREFTDSQGRRRVRGNMDIEIAVDAMELAEHVDHIVLFSGDGDF 122

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
            +LV ALQRK  +V++VST+ + P + +D LRRQAD F+DL  L+ +I RDP E +
Sbjct: 123 RSLVEALQRKGVRVSVVSTISTQPPLIADDLRRQADVFIDLVDLQPKIGRDPSERQ 178


>gi|85715063|ref|ZP_01046047.1| hypothetical protein NB311A_00725 [Nitrobacter sp. Nb-311A]
 gi|85697978|gb|EAQ35851.1| hypothetical protein NB311A_00725 [Nitrobacter sp. Nb-311A]
          Length = 205

 Score =  188 bits (477), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 99/181 (54%), Positives = 136/181 (75%), Gaps = 2/181 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M     KIALFIDGANLYA++K LGFDIDY++LLK F+SR  ++RA+YYT ++ D  Q++
Sbjct: 1   MPSASNKIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLVRAFYYTAIIED--QEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S + PL+DWL YNG+ VV K  KEF +  GR++VK +MD+ELAVDA E +E ++ +V+FS
Sbjct: 59  SSIRPLIDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHVDQIVLFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F +LV A+QR+  +VT+VST+ S P M +D+LRRQAD F DL  L+ ++ RDP E 
Sbjct: 119 GDGDFRSLVEAVQRRGVRVTVVSTIASQPPMIADELRRQADVFTDLVELQPKLGRDPSER 178

Query: 181 K 181
           +
Sbjct: 179 Q 179


>gi|114770098|ref|ZP_01447636.1| hypothetical protein OM2255_10695 [alpha proteobacterium HTCC2255]
 gi|114548935|gb|EAU51818.1| hypothetical protein OM2255_10695 [alpha proteobacterium HTCC2255]
          Length = 174

 Score =  188 bits (477), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 91/176 (51%), Positives = 132/176 (75%), Gaps = 2/176 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M    E+ ALFIDG+NL+AS+KAL  +IDY+KL   F  R  ++RAYYYT ++ + E   
Sbjct: 1   MNYSDERTALFIDGSNLHASAKALNLEIDYKKLKNEFIKRGKLLRAYYYTALIENEEN-- 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           SPL PL+DWL YNG+ +V+K AKEFT++ G+KR+K +MD+ELA+DA E +  +EH++IFS
Sbjct: 59  SPLRPLVDWLTYNGYTIVSKPAKEFTDSAGQKRIKGNMDIELAIDAMELAPNVEHIIIFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
           GDG F +LV +LQR+  +V++VST  S P M +D+LRRQAD ++DL  L++ I+++
Sbjct: 119 GDGDFQSLVKSLQRQGVRVSVVSTTRSHPPMIADELRRQADNYIDLEELRDVISQN 174


>gi|27380178|ref|NP_771707.1| hypothetical protein blr5067 [Bradyrhizobium japonicum USDA 110]
 gi|27353332|dbj|BAC50332.1| blr5067 [Bradyrhizobium japonicum USDA 110]
          Length = 214

 Score =  188 bits (477), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 99/178 (55%), Positives = 136/178 (76%), Gaps = 2/178 (1%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
           P  KIALFIDGANLYA++K LGFDIDY++LLK F+SR  ++RA+YYT ++ D  Q++S +
Sbjct: 5   PTNKIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLLRAFYYTAIIED--QEYSSI 62

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
            PL+DWL YNG+ VV K  KEF +  GR++VK +MD+ELAVDA E +E ++ +V+FSGDG
Sbjct: 63  RPLIDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFSGDG 122

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
            F +LV A+QR+  +VT+VST+ S P M +D+LRRQAD F DL  L++++ RDP E  
Sbjct: 123 DFRSLVEAVQRRGVRVTVVSTIASQPPMIADELRRQADVFTDLVELQSKLGRDPSERP 180


>gi|310815107|ref|YP_003963071.1| hypothetical protein EIO_0609 [Ketogulonicigenium vulgare Y25]
 gi|308753842|gb|ADO41771.1| conserved hypothetical protein [Ketogulonicigenium vulgare Y25]
          Length = 196

 Score =  188 bits (477), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 95/182 (52%), Positives = 134/182 (73%), Gaps = 2/182 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MF   E+IALFIDGANLYA+SK+LGFDIDY+ L   F  R  +IRA+YYT ++ +  +++
Sbjct: 1   MFYRDERIALFIDGANLYAASKSLGFDIDYKLLRSEFMRRGRLIRAFYYTALLEN--EEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           SP+ PL+DWLHYNGF +  K AKEF +  GR+++K +MD+EL VDA E +  ++H+V+FS
Sbjct: 59  SPIRPLVDWLHYNGFSMRTKPAKEFQDAQGRRKIKGNMDIELTVDAMELAPHVDHIVLFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F  L+ ALQR+  +V++VSTV S P M +D+LRRQAD F++L  L++ + R P  D
Sbjct: 119 GDGDFRPLIEALQRRGVRVSVVSTVRSQPPMIADELRRQADNFIELDELRDVLGRPPRPD 178

Query: 181 KK 182
            +
Sbjct: 179 AR 180


>gi|288958017|ref|YP_003448358.1| hypothetical protein AZL_011760 [Azospirillum sp. B510]
 gi|288910325|dbj|BAI71814.1| hypothetical protein AZL_011760 [Azospirillum sp. B510]
          Length = 200

 Score =  188 bits (477), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 90/177 (50%), Positives = 130/177 (73%), Gaps = 2/177 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MF   E++ALFIDGANLYA++++LGFDIDY++L   F     ++RA+YYT +V D  Q++
Sbjct: 1   MFYKEERLALFIDGANLYAAARSLGFDIDYKRLRDGFAGEGRLVRAFYYTALVED--QEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           SP+ PL+DWL YNG+ +V K  KEFT+  GR+++K +MD+ELA+D  E ++ ++H+++FS
Sbjct: 59  SPIRPLVDWLDYNGYTMVTKPTKEFTDASGRRKIKGNMDIELAIDVMEMADHVDHILLFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
           GDG F  LV A+QRK  + ++VSTV S P M +D+LRRQAD F++L  L   IAR  
Sbjct: 119 GDGDFRRLVEAVQRKGVRFSVVSTVRSQPPMVADELRRQADNFIELQELAPFIARTH 175


>gi|328543520|ref|YP_004303629.1| RtsE [polymorphum gilvum SL003B-26A1]
 gi|326413264|gb|ADZ70327.1| RtsE [Polymorphum gilvum SL003B-26A1]
          Length = 195

 Score =  187 bits (476), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 100/181 (55%), Positives = 141/181 (77%), Gaps = 2/181 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MFD REKIALFIDGANLY+++KA+GFDIDY+ LLK F+ +  ++RAYYYT ++ D  Q++
Sbjct: 1   MFDSREKIALFIDGANLYSTAKAIGFDIDYKMLLKEFQGKGYLLRAYYYTAIIED--QEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S + PL+DWL YNG++V+ K  KEF +  GR++VK +MD+ELAVDA +  + ++H+V+FS
Sbjct: 59  SSIRPLIDWLDYNGYKVITKPVKEFVDASGRRKVKGNMDIELAVDAMQIVDHVDHIVLFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F +LV ALQRK +KV++VST+ + P M +D LRRQAD+F+DLA L  ++ RDP + 
Sbjct: 119 GDGDFRSLVEALQRKGRKVSVVSTLQTQPPMIADDLRRQADHFIDLATLAAKVGRDPADR 178

Query: 181 K 181
            
Sbjct: 179 P 179


>gi|148256038|ref|YP_001240623.1| hypothetical protein BBta_4689 [Bradyrhizobium sp. BTAi1]
 gi|146408211|gb|ABQ36717.1| hypothetical protein BBta_4689 [Bradyrhizobium sp. BTAi1]
          Length = 217

 Score =  187 bits (476), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 98/181 (54%), Positives = 136/181 (75%), Gaps = 2/181 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M     KIALFIDGANLYA++K LGFDIDY++LLK F+SR  ++RA+YYT ++ D  Q++
Sbjct: 1   MSSSTNKIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLLRAFYYTAIIED--QEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S + PL+DWL YNG+ VV K  KEF +  GR++VK +MD+ELAVDA E +E ++ +V+FS
Sbjct: 59  SSIRPLIDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F +LV A+QR+  +VT++ST+ S P M +D+LRRQAD F DL  L++++ RDP E 
Sbjct: 119 GDGDFRSLVEAMQRRGVRVTVISTISSQPPMIADELRRQADVFTDLVELQSKLGRDPSER 178

Query: 181 K 181
            
Sbjct: 179 P 179


>gi|158422876|ref|YP_001524168.1| hypothetical protein AZC_1252 [Azorhizobium caulinodans ORS 571]
 gi|158329765|dbj|BAF87250.1| uncharacterized conserved protein [Azorhizobium caulinodans ORS
           571]
          Length = 201

 Score =  187 bits (475), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 104/176 (59%), Positives = 141/176 (80%), Gaps = 2/176 (1%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
            EKIALFIDGANLY+++KALGFDIDY++LLK F+SR  ++RA+YYTT+V D  Q++S + 
Sbjct: 4   MEKIALFIDGANLYSATKALGFDIDYKRLLKEFQSRGYLLRAFYYTTLVED--QEYSSIR 61

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
           PLLDWL YNG+ VV K+A+EFT++ GR+RV+ +MD+E+AVDA E +  L+H+V+FSGDG 
Sbjct: 62  PLLDWLDYNGYSVVTKLAREFTDSQGRRRVRGNMDIEIAVDAMELAGSLDHIVLFSGDGD 121

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           F +LV ALQRK  +V++VST+ + P + SD LRRQAD F+DL  L+ +I RDP E 
Sbjct: 122 FRSLVEALQRKGVRVSVVSTISTQPPLISDDLRRQADVFIDLVDLQAKIGRDPAER 177


>gi|115525034|ref|YP_781945.1| hypothetical protein RPE_3028 [Rhodopseudomonas palustris BisA53]
 gi|115518981|gb|ABJ06965.1| protein of unknown function DUF88 [Rhodopseudomonas palustris
           BisA53]
          Length = 209

 Score =  187 bits (475), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 97/175 (55%), Positives = 135/175 (77%), Gaps = 2/175 (1%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           KIALFIDGANLYA++K LGFDIDY++LLK F+SR  ++RA+YYT ++ D  Q++S + PL
Sbjct: 6   KIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLVRAFYYTAIIED--QEYSSIRPL 63

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126
           +DWL YNG+ VV K  KEF +  GR++VK +MD+ELAVDA E +E ++ +V+FSGDG F 
Sbjct: 64  IDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHVDQIVLFSGDGDFR 123

Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
           +LV A+QR+  +VT++ST+ S P M +D+LRRQAD F DL  L++++ RDP E  
Sbjct: 124 SLVEAVQRRGVRVTVISTISSQPPMIADELRRQADVFTDLVELQSKLGRDPAERP 178


>gi|254780936|ref|YP_003065349.1| hypothetical protein CLIBASIA_04175 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040613|gb|ACT57409.1| hypothetical protein CLIBASIA_04175 [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 182

 Score =  186 bits (473), Expect = 9e-46,   Method: Composition-based stats.
 Identities = 182/182 (100%), Positives = 182/182 (100%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF
Sbjct: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS
Sbjct: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED
Sbjct: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180

Query: 181 KK 182
           KK
Sbjct: 181 KK 182


>gi|163793037|ref|ZP_02187013.1| hypothetical protein BAL199_24649 [alpha proteobacterium BAL199]
 gi|159181683|gb|EDP66195.1| hypothetical protein BAL199_24649 [alpha proteobacterium BAL199]
          Length = 218

 Score =  185 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 98/174 (56%), Positives = 136/174 (78%), Gaps = 2/174 (1%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
           F P EK+ALFIDGANLY++++ALGFDIDY++LL  F S+A +IRA+YYT ++ D  Q++S
Sbjct: 3   FYPHEKVALFIDGANLYSAARALGFDIDYKRLLVLFGSKANLIRAFYYTALLED--QEYS 60

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
           P+ PL+DWL YNG+ +V K AKEFT++ GR+R+K +MD+ELAVD  E  + L+H+V+FSG
Sbjct: 61  PIRPLVDWLDYNGYSLVTKPAKEFTDSQGRRRIKGNMDIELAVDMMEMVDRLDHVVLFSG 120

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
           DG F +L+ A+QRK  + T+VST+ S P M +D+LRRQAD F+DL  L  +I R
Sbjct: 121 DGDFRSLIEAVQRKGVRATVVSTIRSSPPMIADELRRQADQFIDLDQLAGDIER 174


>gi|217977184|ref|YP_002361331.1| protein of unknown function DUF88 [Methylocella silvestris BL2]
 gi|217502560|gb|ACK49969.1| protein of unknown function DUF88 [Methylocella silvestris BL2]
          Length = 205

 Score =  185 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 101/182 (55%), Positives = 143/182 (78%), Gaps = 3/182 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M D +E+IALFIDGANLYA++K+LGFDIDY++LLK F+SR  +IRA+YYT +V D  Q++
Sbjct: 1   MAD-QERIALFIDGANLYATAKSLGFDIDYKRLLKEFQSRGKLIRAFYYTALVED--QEY 57

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S + PL+DWL YNG+ VV K  KEF ++ GR++VK +MD+ELAVDA E +E L+H+V+FS
Sbjct: 58  SSIRPLVDWLDYNGYSVVTKPTKEFVDSLGRRKVKGNMDIELAVDAMEMAEHLDHIVLFS 117

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F +LV A+QRK  +V++VST  + P+M +D+LRRQAD F+D+ +L ++I RD  + 
Sbjct: 118 GDGDFRSLVEAIQRKGVRVSVVSTNATQPAMVADELRRQADEFIDIIHLASKIGRDAGDR 177

Query: 181 KK 182
            +
Sbjct: 178 PE 179


>gi|86749724|ref|YP_486220.1| hypothetical protein RPB_2606 [Rhodopseudomonas palustris HaA2]
 gi|86572752|gb|ABD07309.1| Protein of unknown function DUF88 [Rhodopseudomonas palustris HaA2]
          Length = 209

 Score =  185 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 98/175 (56%), Positives = 134/175 (76%), Gaps = 2/175 (1%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           KIALFIDGANLYA++K LGFDIDY++LLK F SR  +IRA+YYT ++ D  Q++S + PL
Sbjct: 8   KIALFIDGANLYATAKTLGFDIDYKRLLKEFHSRGTLIRAFYYTAIIED--QEYSSIRPL 65

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126
           +DWL YNG+ VV K  KEF +  GR++VK +MD+ELAVDA E +E ++ +V+FSGDG F 
Sbjct: 66  IDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFSGDGDFR 125

Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
           +LV A+QR+  +VT++ST+ S P M +D+LRRQAD F DL  L+++I RDP +  
Sbjct: 126 SLVEAVQRRGVRVTVISTISSQPPMIADELRRQADVFTDLVELQSKIGRDPADRP 180


>gi|220920088|ref|YP_002495389.1| hypothetical protein Mnod_0035 [Methylobacterium nodulans ORS 2060]
 gi|219944694|gb|ACL55086.1| protein of unknown function DUF88 [Methylobacterium nodulans ORS
           2060]
          Length = 219

 Score =  185 bits (469), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 98/181 (54%), Positives = 136/181 (75%), Gaps = 4/181 (2%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M    ++ ALFIDGAN+YA++KALGFDIDYRKLL  F++R  +IRA+YYT +V D  Q++
Sbjct: 1   MTY--QRSALFIDGANVYATTKALGFDIDYRKLLADFKARENLIRAFYYTALVED--QEY 56

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S + PL+DWL YNG++VV K AKEFT++ GR++VK +MD+EL +DA E S  ++H+V+FS
Sbjct: 57  SSIRPLIDWLDYNGYRVVTKPAKEFTDSSGRRKVKGNMDIELTIDALELSPYIDHMVLFS 116

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F  LVAA+QR+  +VT+VST+ + P M +D LRRQAD F+D+ +L   I RD  + 
Sbjct: 117 GDGDFKPLVAAMQRRGVRVTVVSTIQTQPPMVADDLRRQADDFVDIVHLIPRIGRDQSDR 176

Query: 181 K 181
            
Sbjct: 177 P 177


>gi|16125797|ref|NP_420361.1| hypothetical protein CC_1550 [Caulobacter crescentus CB15]
 gi|221234556|ref|YP_002516992.1| cytosolic protein [Caulobacter crescentus NA1000]
 gi|13422935|gb|AAK23529.1| conserved hypothetical protein [Caulobacter crescentus CB15]
 gi|220963728|gb|ACL95084.1| hypothetical cytosolic protein [Caulobacter crescentus NA1000]
          Length = 198

 Score =  184 bits (468), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 101/181 (55%), Positives = 133/181 (73%), Gaps = 2/181 (1%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
           F P +++ALFIDGANLY+++KALGFDIDYRKLL  F+ R ++IRAYYYT +  +    +S
Sbjct: 3   FYPTDRLALFIDGANLYSAAKALGFDIDYRKLLDEFKKRGVLIRAYYYTAIAEN--DDYS 60

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
           P+ PL+DWL YNGF +V K A+EFT++ GRKR +  MD+E+AVD  + +E  +HLV+FSG
Sbjct: 61  PIRPLVDWLDYNGFTLVTKPAREFTDSQGRKRWRGDMDIEIAVDMLQIAETADHLVLFSG 120

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
           DG F  LV A+QRK ++VT+VST+ S P M SD LRRQAD F+DLA L N I R      
Sbjct: 121 DGDFRALVEAVQRKGRRVTVVSTMKSQPPMTSDDLRRQADNFVDLADLGNIIGRPQRTPP 180

Query: 182 K 182
           +
Sbjct: 181 R 181


>gi|39935757|ref|NP_948033.1| hypothetical protein RPA2691 [Rhodopseudomonas palustris CGA009]
 gi|192291344|ref|YP_001991949.1| hypothetical protein Rpal_2966 [Rhodopseudomonas palustris TIE-1]
 gi|39649610|emb|CAE28132.1| DUF88 [Rhodopseudomonas palustris CGA009]
 gi|192285093|gb|ACF01474.1| protein of unknown function DUF88 [Rhodopseudomonas palustris
           TIE-1]
          Length = 216

 Score =  184 bits (468), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 97/173 (56%), Positives = 135/173 (78%), Gaps = 2/173 (1%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           KIALFIDGANLYA++K LGFDIDY++LLK F+SR  ++RA+YYT ++ D  Q++S + PL
Sbjct: 8   KIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGNLVRAFYYTAIIED--QEYSSIRPL 65

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126
           +DWL YNG+ VV K  KEF +  GR++VK +MD+ELAVDA E +E ++ +V+FSGDG F 
Sbjct: 66  IDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFSGDGDFR 125

Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
           +LV A+QR+  +VT++ST+ S P M +D+LRRQAD F DL  L+++I RDP +
Sbjct: 126 SLVEAVQRRGVRVTVISTISSQPPMIADELRRQADIFTDLVELQSKIGRDPAD 178


>gi|316934150|ref|YP_004109132.1| hypothetical protein Rpdx1_2816 [Rhodopseudomonas palustris DX-1]
 gi|315601864|gb|ADU44399.1| hypothetical protein Rpdx1_2816 [Rhodopseudomonas palustris DX-1]
          Length = 213

 Score =  184 bits (468), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 96/173 (55%), Positives = 134/173 (77%), Gaps = 2/173 (1%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           KIALFIDGANLYA++K LGFDIDY++LLK F+ R  ++RA+YYT ++ D  Q++S + PL
Sbjct: 8   KIALFIDGANLYATAKTLGFDIDYKRLLKEFQGRGNLVRAFYYTAIIED--QEYSSIRPL 65

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126
           +DWL YNG+ VV K  KEF +  GR++VK +MD+ELAVDA E +E ++ +V+FSGDG F 
Sbjct: 66  IDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFSGDGDFR 125

Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
           +LV A+QR+  +VT++ST+ S P M +D+LRRQAD F DL  L+++I RDP +
Sbjct: 126 SLVEAVQRRGVRVTVISTISSQPPMIADELRRQADIFTDLVELQSKIGRDPAD 178


>gi|209964804|ref|YP_002297719.1| hypothetical protein RC1_1502 [Rhodospirillum centenum SW]
 gi|209958270|gb|ACI98906.1| conserved hypothetical protein [Rhodospirillum centenum SW]
          Length = 233

 Score =  184 bits (468), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 90/178 (50%), Positives = 133/178 (74%), Gaps = 2/178 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           +F   E++A+FIDGANLYA++++LGFDIDY++LL+ F  R  ++RA+YYT +V D  Q++
Sbjct: 5   IFYQEERLAMFIDGANLYAAARSLGFDIDYKRLLELFAGRGRLVRAFYYTALVED--QEY 62

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           SP+ PL+DWL YNG+ +V K  KE+T+  GR+++K +MD+ELA+D  E +E ++H+++FS
Sbjct: 63  SPIRPLVDWLDYNGYTMVTKPTKEYTDASGRRKIKGNMDIELAIDVMEMAEHVDHILLFS 122

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
           GDG F  LV A+QRK  +VT++STV S P M +D+LRRQAD F++L  L   I R   
Sbjct: 123 GDGDFRRLVEAVQRKGVRVTVISTVRSTPPMVADELRRQADNFLELQDLSPNIMRTHS 180


>gi|91977116|ref|YP_569775.1| hypothetical protein RPD_2645 [Rhodopseudomonas palustris BisB5]
 gi|91683572|gb|ABE39874.1| protein of unknown function DUF88 [Rhodopseudomonas palustris
           BisB5]
          Length = 228

 Score =  184 bits (468), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 98/175 (56%), Positives = 135/175 (77%), Gaps = 2/175 (1%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           KIALFIDGANLYA++K LGFDIDY++LLK F+SR  +IRA+YYT ++ D  Q++S + PL
Sbjct: 27  KIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLIRAFYYTAIIED--QEYSSIRPL 84

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126
           +DWL YNG+ VV K  KEF +  GR++VK +MD+ELAVDA E +E ++ +V+FSGDG F 
Sbjct: 85  IDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFSGDGDFR 144

Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
           +LV A+QR+  +VT++ST+ S P M +D+LRRQAD F DL  L+++I RDP +  
Sbjct: 145 SLVEAVQRRGVRVTVISTISSQPPMIADELRRQADTFTDLVELQSKIGRDPADRP 199


>gi|304392073|ref|ZP_07374015.1| hypothetical protein R2A130_0742 [Ahrensia sp. R2A130]
 gi|303296302|gb|EFL90660.1| hypothetical protein R2A130_0742 [Ahrensia sp. R2A130]
          Length = 199

 Score =  184 bits (467), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 105/175 (60%), Positives = 139/175 (79%), Gaps = 2/175 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MFD REKIAL IDGANLYA+S+ALGFDIDYR++L AF+ R  V+RAYYYT +V D  Q++
Sbjct: 1   MFDEREKIALMIDGANLYATSRALGFDIDYRQMLVAFQKRGYVLRAYYYTALVED--QEY 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S + PL+DWL YNG++V+ K AKEFT+  GR++VK +MD+ELAVDA + ++ ++H V+FS
Sbjct: 59  SAIRPLIDWLDYNGYRVITKPAKEFTDASGRRKVKGNMDIELAVDALDLADTVDHFVLFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
           GDG F  LV +LQRK ++VT+VST  S P M +D+LRRQAD F+DL  L++EI R
Sbjct: 119 GDGDFRALVESLQRKGRRVTVVSTTSSQPPMIADELRRQADVFIDLKSLQDEIGR 173


>gi|298291613|ref|YP_003693552.1| hypothetical protein Snov_1628 [Starkeya novella DSM 506]
 gi|296928124|gb|ADH88933.1| protein of unknown function DUF88 [Starkeya novella DSM 506]
          Length = 203

 Score =  184 bits (466), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 98/176 (55%), Positives = 138/176 (78%), Gaps = 2/176 (1%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
            EKIALFIDGANLY+++K+LGFDIDY++LLK F+ R  V+RA+YYTT+V D   ++S + 
Sbjct: 1   MEKIALFIDGANLYSATKSLGFDIDYKRLLKEFQGRGYVLRAFYYTTLVED--SEYSSIR 58

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
           PLLDWL YNG+ VV K A+EFT++ GR+RV+ +MD+ELAV+A E +  ++H+V+FSGDG 
Sbjct: 59  PLLDWLDYNGYSVVTKPAREFTDSQGRRRVRGNMDIELAVNAMELAGHVDHIVLFSGDGD 118

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           F +LV A+QRK  +VT+VS++ + P M +D+LRRQAD F+DL  L+  + RDP + 
Sbjct: 119 FRSLVEAIQRKGVRVTVVSSIHTQPPMIADELRRQADVFLDLVDLQGRVGRDPADR 174


>gi|170738400|ref|YP_001767055.1| hypothetical protein M446_0033 [Methylobacterium sp. 4-46]
 gi|168192674|gb|ACA14621.1| protein of unknown function DUF88 [Methylobacterium sp. 4-46]
          Length = 216

 Score =  184 bits (466), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 98/176 (55%), Positives = 135/176 (76%), Gaps = 2/176 (1%)

Query: 6   EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
           ++ ALFIDGAN+YA++KALGFDIDYRKLL  FRSR  +IRA+YYT ++ D  Q++S + P
Sbjct: 4   QRSALFIDGANVYATTKALGFDIDYRKLLADFRSRENLIRAFYYTALIED--QEYSSIRP 61

Query: 66  LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
           L+DWL YNG++VV K AKEFT++ GR+++K +MD+EL +DA E S  ++H+V+FSGDG F
Sbjct: 62  LIDWLDYNGYRVVTKPAKEFTDSTGRRKIKGNMDIELTIDALELSPYIDHMVLFSGDGDF 121

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
             LVAA+QR+  +VT+VST+ + P M SD LRRQAD F+D+ +L   I RD  +  
Sbjct: 122 KPLVAAMQRRGVRVTVVSTIQTQPPMVSDDLRRQADDFVDIVHLIPRIGRDQSDRP 177


>gi|167645687|ref|YP_001683350.1| hypothetical protein Caul_1723 [Caulobacter sp. K31]
 gi|167348117|gb|ABZ70852.1| protein of unknown function DUF88 [Caulobacter sp. K31]
          Length = 207

 Score =  184 bits (466), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 98/177 (55%), Positives = 133/177 (75%), Gaps = 2/177 (1%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
           F P E++ALFIDGAN ++++K+LGFDIDYRKLL  FR R +++RAYYYT +  +  +++S
Sbjct: 3   FYPTERLALFIDGANFFSAAKSLGFDIDYRKLLDEFRKRGLLVRAYYYTAIAEN--EEYS 60

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
           P+ PL+DWL YNGF +V K A+EFT++ GRKR +  MD+E+AVD  E +  ++HLV+FSG
Sbjct: 61  PIRPLVDWLDYNGFTLVTKPAREFTDSQGRKRWRGDMDIEIAVDMLEMAATVDHLVLFSG 120

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
           DG F   V A+QRK ++VT+VST+ S P MASD LRRQAD F+DLA L + I R   
Sbjct: 121 DGDFRAAVEAVQRKGRRVTVVSTMKSQPPMASDDLRRQADNFVDLADLGSIIGRPQA 177


>gi|209884968|ref|YP_002288825.1| DUF88 [Oligotropha carboxidovorans OM5]
 gi|209873164|gb|ACI92960.1| DUF88 [Oligotropha carboxidovorans OM5]
          Length = 213

 Score =  184 bits (466), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 98/176 (55%), Positives = 135/176 (76%), Gaps = 2/176 (1%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           KIALFIDGANLYA++K LGFDIDY++LL  F+SR  ++RA+YYT ++ D  Q++S + PL
Sbjct: 8   KIALFIDGANLYATAKTLGFDIDYKRLLLEFQSRGSLVRAFYYTAIIED--QEYSSIRPL 65

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126
           +DWL YNG+ VV K  KEF +  GR++VK +MD+ELAVDA E +E ++ +V+FSGDG F 
Sbjct: 66  IDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFSGDGDFR 125

Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182
           +LV A+QR+  +VT+VST+ S P M +D+LRRQAD F DL  L+++I RDP E  +
Sbjct: 126 SLVEAVQRRGVRVTVVSTIASQPPMIADELRRQADVFTDLVQLQSKIGRDPGERTQ 181


>gi|254418577|ref|ZP_05032301.1| conserved hypothetical protein [Brevundimonas sp. BAL3]
 gi|196184754|gb|EDX79730.1| conserved hypothetical protein [Brevundimonas sp. BAL3]
          Length = 180

 Score =  183 bits (465), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 86/178 (48%), Positives = 122/178 (68%), Gaps = 2/178 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MF   +++A+FIDG+NLY++++AL  D+D++++L  FR ++I+ RAYYYT VV    ++F
Sbjct: 1   MFHSTDRLAIFIDGSNLYSAARALQHDMDFKRMLDWFREKSILTRAYYYTAVVEG--EEF 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           SP+ PL+DWL YNGF VV K  K FT+  G  R+K +MD+E+AVD  E +  L+H V+FS
Sbjct: 59  SPVKPLVDWLDYNGFSVVTKPVKRFTDGQGHSRIKGNMDIEIAVDMLELAPRLDHAVLFS 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
           GDG F  LV A+Q    +VT+VST  + P   +D+LRRQAD F+DL  L  E  R   
Sbjct: 119 GDGDFRRLVQAVQALGVRVTVVSTQKTQPPHIADELRRQADAFLDLNDLMAEFCRPKT 176


>gi|118587968|ref|ZP_01545378.1| hypothetical protein SIAM614_10343 [Stappia aggregata IAM 12614]
 gi|118439590|gb|EAV46221.1| hypothetical protein SIAM614_10343 [Stappia aggregata IAM 12614]
          Length = 188

 Score =  183 bits (465), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 97/171 (56%), Positives = 136/171 (79%), Gaps = 2/171 (1%)

Query: 11  FIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWL 70
           FIDGANLY+++KA+GFDIDY++LLK F+ +A ++RAYYYT ++ D  Q++S + PL+DWL
Sbjct: 2   FIDGANLYSTAKAIGFDIDYKRLLKEFQGQAYLLRAYYYTALIED--QEYSSIRPLIDWL 59

Query: 71  HYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVA 130
            YNG++V+ K  KEF ++ GR++VK +MD+ELAVDA E  E ++H+V+FSGDG F +LV 
Sbjct: 60  DYNGYKVITKPVKEFVDSAGRRKVKGNMDIELAVDAMELVESVDHVVLFSGDGDFRSLVE 119

Query: 131 ALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
           ALQRK +KV++VST+ + P M +D LRRQAD+F+DLA L N+I RDP E  
Sbjct: 120 ALQRKGRKVSVVSTLKTQPPMIADDLRRQADHFIDLASLANKIGRDPSERP 170


>gi|295690031|ref|YP_003593724.1| hypothetical protein Cseg_2656 [Caulobacter segnis ATCC 21756]
 gi|295431934|gb|ADG11106.1| protein of unknown function DUF88 [Caulobacter segnis ATCC 21756]
          Length = 198

 Score =  183 bits (465), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 101/181 (55%), Positives = 132/181 (72%), Gaps = 2/181 (1%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
           F P ++IALFIDGANLY+++KALGFDIDYRKLL  F+ R ++IRAYYYT +  +    +S
Sbjct: 3   FYPTDRIALFIDGANLYSAAKALGFDIDYRKLLDEFKKRGVLIRAYYYTAIAEN--DDYS 60

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
           P+ PL+DWL YNGF +V K A+EFT++ GRKR +  MD+E+AVD  + +E  +HLV+FSG
Sbjct: 61  PIRPLVDWLDYNGFTLVTKPAREFTDSQGRKRWRGDMDIEIAVDMLQMAETADHLVLFSG 120

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
           DG F  LV A+QRK ++VT+VST+ S P M SD LRRQAD F+DLA L   I R      
Sbjct: 121 DGDFRALVEAVQRKGRRVTVVSTMKSQPPMTSDDLRRQADNFVDLADLGGIIGRPQRVQS 180

Query: 182 K 182
           +
Sbjct: 181 R 181


>gi|114327650|ref|YP_744807.1| putative cytoplasmic protein [Granulibacter bethesdensis CGDNIH1]
 gi|114315824|gb|ABI61884.1| hypothetical cytosolic protein [Granulibacter bethesdensis CGDNIH1]
          Length = 195

 Score =  182 bits (463), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 91/180 (50%), Positives = 132/180 (73%), Gaps = 2/180 (1%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
           F P E+IALFIDGANLY++S+ LGF++DYR LL  FRSR+ ++RAYYY+ V+    +++S
Sbjct: 3   FLPTERIALFIDGANLYSASRNLGFEVDYRNLLSTFRSRSQLVRAYYYSAVLET--EEYS 60

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
           PL PL DWL YNG+ +V K A+EFT++ GR+R+K +MD+ELAVD  E ++ ++H V+FSG
Sbjct: 61  PLKPLTDWLAYNGYNLVTKPAREFTDSSGRRRIKGNMDIELAVDMMEIADRIDHAVLFSG 120

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
           D  F  +V A+QRK  +V++VS++ + P M +D LRRQAD F++LA +     R   E +
Sbjct: 121 DADFRRVVEAVQRKGVRVSVVSSIRTSPPMIADDLRRQADEFLELADIATFFTRRQMEPR 180


>gi|148259544|ref|YP_001233671.1| hypothetical protein Acry_0528 [Acidiphilium cryptum JF-5]
 gi|326402750|ref|YP_004282831.1| hypothetical protein ACMV_06020 [Acidiphilium multivorum AIU301]
 gi|146401225|gb|ABQ29752.1| protein of unknown function DUF88 [Acidiphilium cryptum JF-5]
 gi|325049611|dbj|BAJ79949.1| hypothetical protein ACMV_06020 [Acidiphilium multivorum AIU301]
          Length = 190

 Score =  182 bits (463), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 92/178 (51%), Positives = 131/178 (73%), Gaps = 3/178 (1%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
           P+EK ALFIDGANLYA+S+ALGFD+DYR+LL  F  R  ++RAYYY+ ++    +++SPL
Sbjct: 5   PQEKTALFIDGANLYAASRALGFDVDYRRLLDFF-DRVNLVRAYYYSALLDT--EEYSPL 61

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
            PL DWL YNG+ +V K AKEFT+  GR+RVK +MD+ELA+D  E +  ++H ++FSGD 
Sbjct: 62  KPLTDWLAYNGYTLVTKPAKEFTDGAGRRRVKGNMDIELAIDMLEMAPHIDHAILFSGDS 121

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
            F  LV A+QR+  +V+++ST+ + P M +D+LRRQ+D F+DLA + NE  R   E +
Sbjct: 122 DFRRLVEAVQRRGVRVSVISTIKTSPPMIADELRRQSDQFVDLADIANEFTRRQTEPR 179


>gi|323139351|ref|ZP_08074403.1| protein of unknown function DUF88 [Methylocystis sp. ATCC 49242]
 gi|322395417|gb|EFX97966.1| protein of unknown function DUF88 [Methylocystis sp. ATCC 49242]
          Length = 215

 Score =  182 bits (461), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 95/176 (53%), Positives = 132/176 (75%), Gaps = 2/176 (1%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
           +E+IALFIDGANLY ++K   FDIDYR+LL  F  R  +IRA+YYT V+ D  ++FS + 
Sbjct: 4   QERIALFIDGANLYQAAKTQSFDIDYRRLLSEFEQRGRLIRAFYYTAVIED--EEFSSIR 61

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
           PL+DWL YNG+ VV K AK F +  G +++K +MDVELAVDA   ++ ++H+ +FSGDG 
Sbjct: 62  PLIDWLDYNGYAVVTKPAKAFVDATGHRKIKGNMDVELAVDAMGMADHIDHMWLFSGDGD 121

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           F +LVAA+QRK  +V++VST+ + PSM +D+LRRQAD  +DLA L ++I RDP+E 
Sbjct: 122 FCSLVAAVQRKGVRVSVVSTITTRPSMLADELRRQADEVIDLADLADKIGRDPNER 177


>gi|197105347|ref|YP_002130724.1| hypothetical protein PHZ_c1884 [Phenylobacterium zucineum HLK1]
 gi|196478767|gb|ACG78295.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
          Length = 195

 Score =  181 bits (460), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 99/180 (55%), Positives = 137/180 (76%), Gaps = 2/180 (1%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
           F P +++ALFIDGANLY+++K LGFDIDYRKLL+ FR R++++RAYYYT +V +  +++S
Sbjct: 3   FYPTDRLALFIDGANLYSAAKNLGFDIDYRKLLEEFRKRSVLVRAYYYTALVEN--EEYS 60

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
           P+ PL+DWL YNG+++V K A+E+T++ GRKR +  MDVE+AVD  E +   +HLV+FSG
Sbjct: 61  PIRPLVDWLDYNGYRLVTKSAREYTDSQGRKRWRGDMDVEIAVDMLEMAAHADHLVLFSG 120

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
           DG F  LV A+QRK  +VT+VST+ S P M SD+LRRQAD F+DLA L + I R     +
Sbjct: 121 DGDFRALVEAVQRKGSRVTVVSTLKSQPPMVSDELRRQADSFVDLADLADIIGRPSRLPR 180


>gi|315499955|ref|YP_004088758.1| hypothetical protein Astex_2970 [Asticcacaulis excentricus CB 48]
 gi|315417967|gb|ADU14607.1| hypothetical protein Astex_2970 [Asticcacaulis excentricus CB 48]
          Length = 189

 Score =  181 bits (459), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 101/179 (56%), Positives = 130/179 (72%), Gaps = 2/179 (1%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
           F P +KIALFIDGANLY+++KAL FDIDYRKLL  FR R I++RAYYYT +V      +S
Sbjct: 3   FYPTDKIALFIDGANLYSAAKALNFDIDYRKLLDEFRKRGILLRAYYYTALVEG--DDYS 60

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
           P+ PL+DWL YNGF ++ K AKE+T+  GRKR +  MD+E+A D  E +E  +HLV+FSG
Sbjct: 61  PIRPLVDWLDYNGFALITKTAKEYTDAQGRKRWRGDMDIEIACDMMEIAEHADHLVLFSG 120

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           DG F  L+ A+QRK  +VT+VSTV S P M SD+LRRQAD F+DLA L + + R   + 
Sbjct: 121 DGDFRRLIEAVQRKGCRVTVVSTVKSQPPMTSDELRRQADTFVDLADLASVVGRPRQQQ 179


>gi|83311350|ref|YP_421614.1| hypothetical protein amb2251 [Magnetospirillum magneticum AMB-1]
 gi|82946191|dbj|BAE51055.1| Uncharacterized conserved protein [Magnetospirillum magneticum
           AMB-1]
          Length = 187

 Score =  181 bits (459), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 91/177 (51%), Positives = 133/177 (75%), Gaps = 2/177 (1%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
           F   E++ LFIDG+NLY++++ALGFDIDY+KLL  F  +  +IRA+YYT ++ D  Q++S
Sbjct: 3   FYSAERLGLFIDGSNLYSAARALGFDIDYKKLLNLFAGKGRLIRAFYYTALMED--QEYS 60

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
           P+ PL+DWL YNG+ +V K  KEFT+  GR+++K +MD+ELA+D  E  + L+H+V+FSG
Sbjct: 61  PIRPLVDWLDYNGYTMVTKPTKEFTDAMGRRKIKGNMDIELAIDVMEMCQYLDHVVLFSG 120

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
           DG F  LV A+QRK  +V++VST+ S P M +D+LRRQAD F++L  L+++IAR   
Sbjct: 121 DGDFRRLVEAVQRKGVRVSVVSTIRSQPPMVADELRRQADVFIELQDLESQIARAQQ 177


>gi|46201864|ref|ZP_00208280.1| COG1432: Uncharacterized conserved protein [Magnetospirillum
           magnetotacticum MS-1]
          Length = 187

 Score =  181 bits (459), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 90/177 (50%), Positives = 133/177 (75%), Gaps = 2/177 (1%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
           F   E++ LFIDG+NLY+++++LGFDIDY+KLL  F  +  +IRA+YYT ++ D  Q++S
Sbjct: 3   FYSAERLGLFIDGSNLYSAARSLGFDIDYKKLLNLFAGKGRLIRAFYYTALMED--QEYS 60

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
           P+ PL+DWL YNG+ +V K  KEFT+  GR+++K +MD+ELA+D  E  + L+H+V+FSG
Sbjct: 61  PIRPLVDWLDYNGYTMVTKPTKEFTDAMGRRKIKGNMDIELAIDVMEMCQYLDHVVLFSG 120

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
           DG F  LV A+QRK  +V++VST+ S P M +D+LRRQAD F++L  L+++IAR   
Sbjct: 121 DGDFRRLVEAVQRKGVRVSVVSTIRSQPPMVADELRRQADVFIELQDLESQIARAQQ 177


>gi|254293927|ref|YP_003059950.1| hypothetical protein Hbal_1565 [Hirschia baltica ATCC 49814]
 gi|254042458|gb|ACT59253.1| protein of unknown function DUF88 [Hirschia baltica ATCC 49814]
          Length = 184

 Score =  180 bits (456), Expect = 8e-44,   Method: Composition-based stats.
 Identities = 90/174 (51%), Positives = 125/174 (71%), Gaps = 2/174 (1%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
           F   E+IALFIDGANLY+++K L  ++DYR+LL  FR +  ++RAYYYT ++ +  +++S
Sbjct: 3   FYKDERIALFIDGANLYSAAKTLNVELDYRRLLSEFRKKGRLLRAYYYTALIEN--EEYS 60

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
           P+ PL+DWL YNG+ VV K AKEFT+  GR+RVK  MDVE+AVD    ++ L+H ++FSG
Sbjct: 61  PIRPLVDWLQYNGYNVVTKPAKEFTDAAGRRRVKGDMDVEIAVDMLTLADKLDHAILFSG 120

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
           DG  T LV ALQ +  +V++VS+V + P M SD LRR AD F+DL+ L   I R
Sbjct: 121 DGDLTVLVKALQNRGLRVSVVSSVKTQPPMISDDLRRSADNFIDLSDLVKIIGR 174


>gi|329890088|ref|ZP_08268431.1| hypothetical protein BDIM_17840 [Brevundimonas diminuta ATCC 11568]
 gi|328845389|gb|EGF94953.1| hypothetical protein BDIM_17840 [Brevundimonas diminuta ATCC 11568]
          Length = 193

 Score =  179 bits (455), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 88/177 (49%), Positives = 119/177 (67%), Gaps = 2/177 (1%)

Query: 3   DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
            P ++IALFIDGANLY++++AL  D+D++KL   F     +IRAYYYT ++    ++FSP
Sbjct: 4   HPDDRIALFIDGANLYSAARALNCDLDFKKLSTWFVGEGRLIRAYYYTAIIEG--EEFSP 61

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
           + PL+DWL YNGF VV K  K FT+  G  R K +MD+E+AVD  E +  L+  V+FSGD
Sbjct: 62  VRPLVDWLDYNGFTVVTKPVKRFTDAQGHSRTKGNMDMEIAVDMLELAPRLDQAVLFSGD 121

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
           G F  +V ALQ K  +VT+VSTV S P   SD LRRQAD F+DLA + N++ +    
Sbjct: 122 GDFRRVVQALQAKGVRVTVVSTVKSQPPQISDDLRRQADAFVDLADIMNQVGKPKAA 178


>gi|239787551|emb|CAX84020.1| conserved uncharacterized protein [uncultured bacterium]
          Length = 206

 Score =  179 bits (453), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 100/188 (53%), Positives = 139/188 (73%), Gaps = 10/188 (5%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
           F P+E++ALFIDG+NLYA+++ALGFDIDY++LL+ F  +  +IRA+YYT +V D  Q++S
Sbjct: 3   FYPQERVALFIDGSNLYAAARALGFDIDYKRLLQMFAGKGRLIRAFYYTALVED--QEYS 60

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
           P+ PL+DWL YNG+ +V K  KEFT+  GR+++K +MD+ELA+D  E SE L+H+V+FSG
Sbjct: 61  PIRPLVDWLDYNGYTMVTKPTKEFTDASGRRKIKGNMDIELAIDVMEMSEHLDHIVLFSG 120

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD----- 176
           DG F  LV A+QRK  +VT+VSTV S P M +D+LRRQAD F++L  L+  I R      
Sbjct: 121 DGDFRRLVDAVQRKGVRVTVVSTVRSQPPMVADELRRQADNFVELQDLQPSIERTIANRE 180

Query: 177 ---PDEDK 181
              P ED+
Sbjct: 181 HGAPREDR 188


>gi|117925174|ref|YP_865791.1| hypothetical protein Mmc1_1877 [Magnetococcus sp. MC-1]
 gi|117608930|gb|ABK44385.1| protein of unknown function DUF88 [Magnetococcus sp. MC-1]
          Length = 194

 Score =  176 bits (447), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 86/177 (48%), Positives = 128/177 (72%), Gaps = 3/177 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           +F   E++ +FIDG+NLYA+ ++LGFD DY+KLL+ FRS+A +IRAYY+T +  D  Q++
Sbjct: 10  IFRQDERVMVFIDGSNLYAAIRSLGFDFDYKKLLRYFRSQANLIRAYYFTALGDD--QEY 67

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119
           SP+ PL+DWL YNG+ VV K  KE+ +   G KR K +MD+E+AVD  + +   +H V+F
Sbjct: 68  SPIRPLVDWLAYNGYAVVTKPIKEYVDPVTGHKRTKGNMDIEIAVDMMKLAPYYDHAVLF 127

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
           SGDG F ++V   Q + K VT+VS++++ P M +D+LRRQADYF++L  +K  + RD
Sbjct: 128 SGDGDFRSVVEVAQGQGKVVTVVSSLMTQPPMIADELRRQADYFIELNRIKEHLQRD 184


>gi|27377446|ref|NP_768975.1| hypothetical protein bll2335 [Bradyrhizobium japonicum USDA 110]
 gi|27350590|dbj|BAC47600.1| bll2335 [Bradyrhizobium japonicum USDA 110]
          Length = 203

 Score =  174 bits (442), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 101/177 (57%), Positives = 137/177 (77%), Gaps = 3/177 (1%)

Query: 6   EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
           EKIALFIDG+NL+A+SKALGFDIDYR+LL  F+SR  ++RA+YYTT++ D  Q++S + P
Sbjct: 5   EKIALFIDGSNLHATSKALGFDIDYRRLLGEFQSRGALLRAFYYTTLIED--QEYSSIRP 62

Query: 66  LLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
           L+DWL YNG+ VV K  KEF +   GR++VK SMDV+LAV+A E +E ++ +V+FSGDG 
Sbjct: 63  LIDWLDYNGYTVVTKFTKEFVDAITGRRKVKGSMDVDLAVNAMELAEHVDQIVLFSGDGN 122

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
           F +LV ALQR+  +VT+VST+ + P+M +D LRRQAD F+DLA LK ++ RDP    
Sbjct: 123 FRSLVEALQRRGVRVTVVSTLCTQPAMVADDLRRQADVFIDLAELKPKVGRDPANRP 179


>gi|83858189|ref|ZP_00951711.1| hypothetical protein OA2633_01781 [Oceanicaulis alexandrii
           HTCC2633]
 gi|83853012|gb|EAP90864.1| hypothetical protein OA2633_01781 [Oceanicaulis alexandrii
           HTCC2633]
          Length = 190

 Score =  173 bits (439), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 90/179 (50%), Positives = 133/179 (74%), Gaps = 2/179 (1%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
           F P EK+ LFIDGANLY++++ L FDIDY++LL+ FR R  +IRA YYT ++    ++++
Sbjct: 3   FYPNEKLGLFIDGANLYSAARNLDFDIDYKRLLEEFRKRGRLIRANYYTALIES--EEYT 60

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
           P+ PL+DWL YNGF+V+ K AKE+T++ GR+R+K  MDV+LA+D  E ++ L+H+V+FSG
Sbjct: 61  PIRPLIDWLDYNGFKVITKAAKEYTDDSGRRRIKGDMDVDLAIDVMEAADYLDHIVLFSG 120

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           DG F  +V A+QRK  +V++VST+ S P MA+D LRRQAD F++L  L   + R+  + 
Sbjct: 121 DGDFKKVVEAVQRKGVRVSVVSTLKSSPPMAADDLRRQADTFIELQDLGKLVGRERRQR 179


>gi|258541738|ref|YP_003187171.1| hypothetical protein APA01_06420 [Acetobacter pasteurianus IFO
           3283-01]
 gi|256632816|dbj|BAH98791.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01]
 gi|256635873|dbj|BAI01842.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03]
 gi|256638928|dbj|BAI04890.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07]
 gi|256641982|dbj|BAI07937.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22]
 gi|256645037|dbj|BAI10985.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26]
 gi|256648092|dbj|BAI14033.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32]
 gi|256651145|dbj|BAI17079.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256654136|dbj|BAI20063.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12]
          Length = 207

 Score =  173 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 81/181 (44%), Positives = 125/181 (69%), Gaps = 2/181 (1%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
               EK  LFIDG++LY++S++LGFD+DY+KLL  F ++  +IRAYYY  ++    + +S
Sbjct: 3   LQKTEKTCLFIDGSSLYSTSRSLGFDVDYKKLLDFFAAKTHIIRAYYYAAILDT--EDYS 60

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
           PL PL DWL YNG+ +V K A+EFT++ G++RVK +MD+E+AVD  E +  ++H ++FSG
Sbjct: 61  PLKPLTDWLSYNGYFLVTKPAREFTDSTGKRRVKGNMDIEIAVDMMEMAPHIDHAILFSG 120

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
           D  F  +V A+QR+  +V++VS++ S P +  D LRRQAD F++L+ L     R   E+ 
Sbjct: 121 DSDFRRVVEAVQRQGTRVSVVSSMRSTPPLIGDDLRRQADQFLELSALAGNFTRRQTENP 180

Query: 182 K 182
           +
Sbjct: 181 R 181


>gi|162147943|ref|YP_001602404.1| hypothetical protein GDI_2159 [Gluconacetobacter diazotrophicus PAl
           5]
 gi|161786520|emb|CAP56102.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 210

 Score =  173 bits (438), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 84/180 (46%), Positives = 127/180 (70%), Gaps = 2/180 (1%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
           F P E++ LFIDGA+LY++S+ LGFD+DYR LL  FRS+  VIRAYYY+ ++    +++S
Sbjct: 10  FQPNERVCLFIDGASLYSASRHLGFDVDYRNLLTFFRSKCHVIRAYYYSAILES--EEYS 67

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
           PL PL DWL YNG+ +V K A+EF ++ GR+RVK +MD+ELAVD  E +  ++H V+FSG
Sbjct: 68  PLKPLTDWLVYNGYFLVTKTAREFVDHNGRRRVKGNMDIELAVDMMEMAPRIDHAVLFSG 127

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
           D  F  L+  +QR+  + +++S++ + P +  D+LRRQAD F++LA +  +  R   E +
Sbjct: 128 DADFRRLLETVQRQGVRTSVISSIRTSPPLIGDELRRQADQFIELADIAPQFTRRQAEAR 187


>gi|304321225|ref|YP_003854868.1| hypothetical protein PB2503_08354 [Parvularcula bermudensis
           HTCC2503]
 gi|303300127|gb|ADM09726.1| hypothetical protein PB2503_08354 [Parvularcula bermudensis
           HTCC2503]
          Length = 206

 Score =  172 bits (437), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 84/181 (46%), Positives = 127/181 (70%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            DP +K A+FIDGANLY +++ LGFDIDY++LL+  R+   ++RAYYYT +  + EQ +S
Sbjct: 3   LDPDDKTAIFIDGANLYKTARNLGFDIDYKRLLQKTRAETRLVRAYYYTAMPEEREQDYS 62

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
           PL PL+DWL YNG+ ++ K A+EFT++ GRKR + S+D++LA+D  E ++ ++ LV+F+G
Sbjct: 63  PLRPLVDWLDYNGYTMMTKAAREFTDSQGRKRFRGSVDIDLALDFVEMADKVDCLVLFTG 122

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
           +G F   +A  Q +  +V  VST  + P MASD +RRQAD F+DL  L++ I R     +
Sbjct: 123 NGDFRPAIAKAQSRGCRVICVSTTATQPPMASDDIRRQADQFVDLTSLEDVIGRKSTSHR 182

Query: 182 K 182
           +
Sbjct: 183 R 183


>gi|114800400|ref|YP_759598.1| hypothetical protein HNE_0871 [Hyphomonas neptunium ATCC 15444]
 gi|114740574|gb|ABI78699.1| conserved hypothetical protein [Hyphomonas neptunium ATCC 15444]
          Length = 189

 Score =  172 bits (436), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 89/179 (49%), Positives = 129/179 (72%), Gaps = 2/179 (1%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
           F   E++ALFIDGANLY++++A+G +ID+RKLLK F+SR  ++RA YYT +V     ++S
Sbjct: 3   FYKDERLALFIDGANLYSAARAVGLEIDFRKLLKEFQSRGRLVRASYYTALVES--DEYS 60

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
           P+ PL+DWL YNGF VV K A+EF +  GRKRV+ +MDVELAVD  E +   +H+V+FSG
Sbjct: 61  PIRPLVDWLAYNGFNVVKKPAREFVDREGRKRVRGNMDVELAVDMLEAAAYCDHIVLFSG 120

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           +G F  LV A++ +  +V++VST+ + P M SD LRR+AD F++L  L + +AR   + 
Sbjct: 121 NGDFRRLVEAVKARGVRVSVVSTMNATPPMISDDLRREADTFIELTDLGDLVARPRRDT 179


>gi|329114476|ref|ZP_08243238.1| Hypothetical protein APO_1273 [Acetobacter pomorum DM001]
 gi|326696552|gb|EGE48231.1| Hypothetical protein APO_1273 [Acetobacter pomorum DM001]
          Length = 207

 Score =  172 bits (435), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 81/181 (44%), Positives = 125/181 (69%), Gaps = 2/181 (1%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
               EK  LFIDG++LY++S++LGFD+DY+KLL  F ++  +IRAYYY  ++    + +S
Sbjct: 3   LQKTEKTCLFIDGSSLYSTSRSLGFDVDYKKLLDFFAAKTHIIRAYYYAAILDT--EDYS 60

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
           PL PL DWL YNG+ +V K A+EFT++ G++RVK +MD+E+AVD  E +  ++H ++FSG
Sbjct: 61  PLKPLTDWLSYNGYFLVTKPAREFTDSTGKRRVKGNMDIEIAVDMLEMAPHIDHAILFSG 120

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
           D  F  +V A+QR+  +V++VS++ S P +  D LRRQAD F++L+ L     R   E+ 
Sbjct: 121 DSDFRRVVEAVQRQGTRVSVVSSMRSTPPLIGDDLRRQADQFLELSALAGNFTRRQTENP 180

Query: 182 K 182
           +
Sbjct: 181 R 181


>gi|209542561|ref|YP_002274790.1| hypothetical protein Gdia_0379 [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209530238|gb|ACI50175.1| protein of unknown function DUF88 [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 203

 Score =  171 bits (433), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 84/180 (46%), Positives = 127/180 (70%), Gaps = 2/180 (1%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
           F P E++ LFIDGA+LY++S+ LGFD+DYR LL  FRS+  VIRAYYY+ ++    +++S
Sbjct: 3   FQPNERVCLFIDGASLYSASRHLGFDVDYRNLLTFFRSKCHVIRAYYYSAILES--EEYS 60

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
           PL PL DWL YNG+ +V K A+EF ++ GR+RVK +MD+ELAVD  E +  ++H V+FSG
Sbjct: 61  PLKPLTDWLVYNGYFLVTKTAREFVDHNGRRRVKGNMDIELAVDMMEMAPRIDHAVLFSG 120

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
           D  F  L+  +QR+  + +++S++ + P +  D+LRRQAD F++LA +  +  R   E +
Sbjct: 121 DADFRRLLETVQRQGVRTSVISSIRTSPPLIGDELRRQADQFIELADIAPQFTRRQAEAR 180


>gi|312114148|ref|YP_004011744.1| hypothetical protein Rvan_1386 [Rhodomicrobium vannielii ATCC
           17100]
 gi|311219277|gb|ADP70645.1| hypothetical protein Rvan_1386 [Rhodomicrobium vannielii ATCC
           17100]
          Length = 178

 Score =  170 bits (431), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 83/178 (46%), Positives = 118/178 (66%), Gaps = 2/178 (1%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
           F   E++ LF+DG NL+A+++ LGF IDY  LL+ FR+   +IR  YY  +  D     S
Sbjct: 3   FYQNERLGLFLDGPNLFAAARTLGFMIDYGSLLRLFRNSGQLIRVNYYLPIADDFAT--S 60

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
           PL  + DWL YNG+ V+ K AK++ +  GR+++KS MD+ELAVDA   +  L+H+V+FSG
Sbjct: 61  PLRGVSDWLQYNGYTVITKPAKDYVDANGRRKIKSGMDIELAVDALSLANSLDHIVLFSG 120

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
            G F  LV+ALQR+ ++VT+VST+ + P + +D LRR AD F+DLA L   I R P  
Sbjct: 121 LGDFCGLVSALQRRGRRVTVVSTIRTQPPIVADDLRRMADQFIDLADLAPMIGRAPAA 178


>gi|296115034|ref|ZP_06833676.1| hypothetical protein GXY_04609 [Gluconacetobacter hansenii ATCC
           23769]
 gi|295978371|gb|EFG85107.1| hypothetical protein GXY_04609 [Gluconacetobacter hansenii ATCC
           23769]
          Length = 204

 Score =  170 bits (430), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 83/180 (46%), Positives = 131/180 (72%), Gaps = 2/180 (1%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
           F P+E++ LFIDG +LY++S+ LGF++DYRKLL  FRS++ V+RAYYY+ V+    +++S
Sbjct: 3   FQPQERLCLFIDGTSLYSASRNLGFEVDYRKLLSFFRSKSNVLRAYYYSAVLET--EEYS 60

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
           PL PL DWL YNG+ +V K A+E+T++ GR+RVK +MD+ELAVD  E +  ++H V+FSG
Sbjct: 61  PLKPLTDWLVYNGYFLVTKTAREYTDHTGRRRVKGNMDIELAVDMLEMAPRIDHAVLFSG 120

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
           D     L+ A+QR+  + T+++++ + P +  D+LRRQAD F++LA + +   R   E++
Sbjct: 121 DADSRRLLEAVQRQGVRTTVIASIKTSPPLIGDELRRQADQFIELADIASHFTRRQIENR 180


>gi|307322655|ref|ZP_07601988.1| protein of unknown function DUF88 [Sinorhizobium meliloti AK83]
 gi|306891701|gb|EFN22554.1| protein of unknown function DUF88 [Sinorhizobium meliloti AK83]
          Length = 200

 Score =  169 bits (429), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 97/181 (53%), Positives = 138/181 (76%), Gaps = 2/181 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MFD REKIALFIDG +L+++S++LGF+IDYR++L+AFR R  ++R Y YT V+ D     
Sbjct: 1   MFDSREKIALFIDGPSLFSASRSLGFEIDYRRVLEAFRRRGYLLRVYLYTAVIEDDAH-- 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
             +   +DWL YNG+QVV KVA +FT+  G++++K +M +ELA+DA EQ+  ++HLVI +
Sbjct: 59  KSMRSWIDWLDYNGYQVVTKVAVKFTDFAGQQKIKGNMALELAIDAMEQASNVDHLVIVT 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GD  F  LV A+QRK +KV+IVST+LS P M +D LRRQAD+F+DLA L++EIAR+P + 
Sbjct: 119 GDSVFLALVEAIQRKGRKVSIVSTMLSRPPMVADDLRRQADHFIDLATLQHEIAREPSKY 178

Query: 181 K 181
           +
Sbjct: 179 R 179


>gi|330993366|ref|ZP_08317301.1| hypothetical protein SXCC_03264 [Gluconacetobacter sp. SXCC-1]
 gi|329759396|gb|EGG75905.1| hypothetical protein SXCC_03264 [Gluconacetobacter sp. SXCC-1]
          Length = 202

 Score =  168 bits (426), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 82/180 (45%), Positives = 128/180 (71%), Gaps = 2/180 (1%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
           F P+E++ LFIDG +LY++S+ LGF++DYRKLL+ FR+++ V+RAYYY+ V+    +++S
Sbjct: 3   FQPQERLCLFIDGTSLYSASRNLGFEVDYRKLLQFFRAKSNVLRAYYYSAVLDT--EEYS 60

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
           PL PL DWL YNG+ +V K A+EF ++ GR+RV+ +MDVEL VD  E +  ++H V+FSG
Sbjct: 61  PLKPLTDWLVYNGYTLVTKNAREFIDHNGRRRVRGNMDVELTVDMMEMAPHIDHAVLFSG 120

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
           D  F  L+ ++QR+  + T+V ++ + P +  D+LRRQAD F++LA +     R   E +
Sbjct: 121 DSDFRRLLESVQRQGVRTTVVGSIKTTPPLIGDELRRQADQFIELADISANFMRRHIESR 180


>gi|157273336|gb|ABV27235.1| RtsE [Candidatus Chloracidobacterium thermophilum]
          Length = 332

 Score =  168 bits (425), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 55/177 (31%), Positives = 93/177 (52%), Gaps = 12/177 (6%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            R ++A+FIDG NL+ ++++ G +IDY KLL   R    ++RA++YT V    +QQ    
Sbjct: 21  NRGRVAIFIDGNNLFHAARSAGVEIDYAKLLAYLRGDDPLLRAFFYTGV----DQQAERQ 76

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
              L W+  NG++VV K  K F +       K+++DVE+AVD    ++  +  ++ SGD 
Sbjct: 77  QGFLLWMRRNGYRVVQKELKTFPDGT----KKANLDVEIAVDMLSLADKYDTAILVSGDE 132

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
            FT  +  +  K  +V +        +  S +L   AD F +L  +  EI++ P + 
Sbjct: 133 DFTYALNVIAYKGVRVEVAGF----RANTSPRLIDVADRFHELDSVLAEISKSPSKR 185


>gi|22298293|ref|NP_681540.1| hypothetical protein tlr0751 [Thermosynechococcus elongatus BP-1]
 gi|22294472|dbj|BAC08302.1| tlr0751 [Thermosynechococcus elongatus BP-1]
          Length = 227

 Score =  166 bits (421), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 57/177 (32%), Positives = 93/177 (52%), Gaps = 12/177 (6%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
              R ++A+FIDG+NL+ ++  LG +IDY KLL      + + R+++YT V    E+Q  
Sbjct: 16  LQNRGRVAIFIDGSNLFYAALQLGIEIDYSKLLCHLTQGSRLFRSFFYTGVDPTNEKQ-- 73

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
                L W+  NG++VV+K   +  +       K+++DVE+AVD        +  ++ SG
Sbjct: 74  --QGFLLWMRRNGYRVVSKELVQLPDGS----KKANLDVEIAVDMMALVGCYDTAILVSG 127

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
           DG     V A+  +  +V +VS      SM SD L   AD ++DL  ++ EI + P 
Sbjct: 128 DGDLAYAVDAVSYRGARVEVVS----LRSMTSDSLINVADRYIDLESIREEIQKAPR 180


>gi|144899867|emb|CAM76731.1| protein containing DUF88 [Magnetospirillum gryphiswaldense MSR-1]
          Length = 193

 Score =  166 bits (420), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 94/174 (54%), Positives = 132/174 (75%), Gaps = 2/174 (1%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
           F   E++ LFIDG+NLYA++KALGFDIDY++LL  F ++  +IRA+YYT +V D  Q++S
Sbjct: 8   FYDSERVGLFIDGSNLYAAAKALGFDIDYKRLLDHFATKGRLIRAFYYTALVED--QEYS 65

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
           P+ PL+DWL YNG+ +V K  KEFT+  GR+++K +MD+ELA+D  E +  L+H+V+FSG
Sbjct: 66  PIRPLVDWLDYNGYTMVTKPTKEFTDAAGRRKIKGNMDIELAIDVMEMAPHLDHVVLFSG 125

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
           DG F  LV A+QRK  +VT+VSTV S P M +D+LRRQAD F++L  L++ I R
Sbjct: 126 DGDFRRLVEAIQRKGVRVTVVSTVRSQPPMVADELRRQADSFLELLDLESIIGR 179


>gi|220908708|ref|YP_002484019.1| hypothetical protein Cyan7425_3333 [Cyanothece sp. PCC 7425]
 gi|219865319|gb|ACL45658.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7425]
          Length = 207

 Score =  165 bits (418), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 59/178 (33%), Positives = 96/178 (53%), Gaps = 12/178 (6%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            + R ++A+FIDG+NL+ ++  LG +IDY KLL    S + ++R+++YT V    E+Q  
Sbjct: 16  LENRGRVAIFIDGSNLFYAALQLGIEIDYSKLLCRLTSGSRLLRSFFYTGVDPTNEKQ-- 73

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
                L W+  NG++V+AK   +  +       K+++DVE+AVD        +  V+ SG
Sbjct: 74  --QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDMMSLVGSYDTGVLVSG 127

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
           DG     V A+  +  +V +VS      SM SD L   AD ++DL  +K +I + P  
Sbjct: 128 DGDLAYAVDAVSYRGVRVEVVS----LRSMTSDSLINVADRYIDLDSIKEDIQKAPRS 181


>gi|114570128|ref|YP_756808.1| hypothetical protein Mmar10_1578 [Maricaulis maris MCS10]
 gi|114340590|gb|ABI65870.1| protein of unknown function DUF88 [Maricaulis maris MCS10]
          Length = 179

 Score =  164 bits (414), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 87/178 (48%), Positives = 130/178 (73%), Gaps = 2/178 (1%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
           F P E+I LFIDGANL++++KAL FDID+++LL+ FR R  +IRA YYT ++    ++++
Sbjct: 3   FYPDERIGLFIDGANLFSTTKALDFDIDFKRLLEEFRKRGKLIRANYYTALLE--HEEYN 60

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
           PL PL+DWL YNGF V+ K AKE+T++ GR+R+K  MD+ELAVD  E +  L+H+++F+G
Sbjct: 61  PLRPLVDWLDYNGFSVITKPAKEYTDDHGRRRIKGDMDIELAVDMLEAATYLDHIILFTG 120

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
           DG F   +AA + K  ++++VS++ + PSM SD LRR+AD F++L  L+  I R P  
Sbjct: 121 DGDFRYALAAARAKGARISVVSSLKTSPSMISDDLRREADAFIELDDLRAMIGRAPAS 178


>gi|56750416|ref|YP_171117.1| hypothetical protein syc0407_c [Synechococcus elongatus PCC 6301]
 gi|81299952|ref|YP_400160.1| hypothetical protein Synpcc7942_1143 [Synechococcus elongatus PCC
           7942]
 gi|56685375|dbj|BAD78597.1| hypothetical protein [Synechococcus elongatus PCC 6301]
 gi|81168833|gb|ABB57173.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942]
          Length = 198

 Score =  164 bits (414), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 60/180 (33%), Positives = 97/180 (53%), Gaps = 12/180 (6%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           + + R +IA+FIDG+NL+ ++  LG +IDY KLL    + + ++R+++YT V    E+Q 
Sbjct: 16  ILENRGRIAIFIDGSNLFYAALQLGIEIDYTKLLACLTNGSRLLRSFFYTGVDRSNEKQ- 74

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
                 L W+  NG++VVAK   +  +       K+++DVE+AVD    +   +  V+ S
Sbjct: 75  ---QGFLLWMRRNGYRVVAKDLIQLPDGT----KKANLDVEIAVDMLALAGTYDTAVLVS 127

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG     V  +  +  +V +VS      SM SD L   AD ++DL  LK  I + P + 
Sbjct: 128 GDGDLAYAVEVVGYRGVRVEVVS----LRSMTSDNLINVADRYIDLESLKASIQKLPRQP 183


>gi|6459785|gb|AAF11547.1|AE002037_8 conserved hypothetical protein [Deinococcus radiodurans R1]
          Length = 263

 Score =  162 bits (411), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 61/172 (35%), Positives = 95/172 (55%), Gaps = 7/172 (4%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
            E+IALFIDGAN+YA++K LG++ D+RK+L+ F     +  A+YYT V    + +     
Sbjct: 64  MERIALFIDGANVYAAAKRLGWNFDHRKILEHFAGLGALYNAFYYTAVPWPVDDKQKR-- 121

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
             +D L Y G+ V  +  +E T+  G    ++S+D+EL  D        +  V+ SGDG 
Sbjct: 122 -FVDALTYMGYTVRTRPLRENTDENGDTSRRASLDIELVTDLLTTESRYDVAVLLSGDGD 180

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
           F   V  L+ + KKV + S     P M S +LR  AD ++DLA ++ ++ R 
Sbjct: 181 FERPVEVLRARGKKVIVASI----PEMTSAELRNAADEYVDLASIREQVERP 228


>gi|119487031|ref|ZP_01620903.1| hypothetical protein L8106_18981 [Lyngbya sp. PCC 8106]
 gi|119455960|gb|EAW37094.1| hypothetical protein L8106_18981 [Lyngbya sp. PCC 8106]
          Length = 205

 Score =  162 bits (410), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 58/179 (32%), Positives = 95/179 (53%), Gaps = 12/179 (6%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            + R ++A+FIDG+NL+ ++  LG +IDY KLL      + ++R+++YT V    E+Q  
Sbjct: 17  LENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRSFFYTGVDRTNEKQ-- 74

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
                L W+  NG++V+AK   +  +       K+++DVE+AVD        +  V+ SG
Sbjct: 75  --QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDMLALVGSYDTAVLVSG 128

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           DG     V  +  +  +V +VS      SM SD L   AD ++DL  +K EI ++P   
Sbjct: 129 DGDLAYAVDCVSYRGVRVEVVS----LRSMTSDSLINVADRYIDLENVKEEIQKNPRSP 183


>gi|282900793|ref|ZP_06308733.1| protein of unknown function DUF88 [Cylindrospermopsis raciborskii
           CS-505]
 gi|281194323|gb|EFA69280.1| protein of unknown function DUF88 [Cylindrospermopsis raciborskii
           CS-505]
          Length = 251

 Score =  162 bits (409), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 56/178 (31%), Positives = 97/178 (54%), Gaps = 12/178 (6%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            + R ++A+FIDG+NL+ ++  LG +IDY KLL      + ++RA++YT V    E+Q  
Sbjct: 59  LENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRAFFYTGVDRTNEKQ-- 116

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
                L W+  NG++V+AK   +  +       K+++DVE+AVD     +  +  V+ SG
Sbjct: 117 --QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDMMALVDSYDTAVLVSG 170

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
           DG     V ++  +  +V +VS      SM SD L   +D ++DL  ++ +I + P +
Sbjct: 171 DGDLAYAVNSVSYRGVRVEVVS----LRSMTSDSLINVSDRYIDLEAIREDIQKTPRQ 224


>gi|294084108|ref|YP_003550866.1| hypothetical protein SAR116_0539 [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292663681|gb|ADE38782.1| Protein of unknown function DUF88 [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 183

 Score =  161 bits (408), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 76/178 (42%), Positives = 118/178 (66%), Gaps = 3/178 (1%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
            +K ALFIDG+N YA+++AL  DID+ ++   F     +IRAYYYT +  D  Q+FS L 
Sbjct: 1   MDKTALFIDGSNFYAAARALNLDIDFARMRTHFAKDTNLIRAYYYTAIPED--QEFSSLR 58

Query: 65  PLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
           PL+DWL YNG+ VV+K+ +EF +   GR+R+K +MD+ELA+D  + +  ++H ++FSGDG
Sbjct: 59  PLVDWLDYNGYAVVSKLTREFIDEETGRRRLKGNMDMELALDMLKLAPHIDHAILFSGDG 118

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
            F  L+  +Q    + T+VST  + P M +DQLRR AD ++D+A +  +I++   +  
Sbjct: 119 DFCRLLEDVQALGVRTTVVSTNKTSPPMVADQLRRMADVYIDMADIAADISKSSSKAP 176


>gi|254461881|ref|ZP_05075297.1| hypothetical protein RB2083_2472 [Rhodobacterales bacterium
           HTCC2083]
 gi|206678470|gb|EDZ42957.1| hypothetical protein RB2083_2472 [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 200

 Score =  161 bits (407), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 73/177 (41%), Positives = 115/177 (64%), Gaps = 2/177 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MF   E+IA+FIDG +L+A SKALGFDID++   K F  R  + +  Y+TT+V    ++F
Sbjct: 1   MFYKDERIAVFIDGKSLFACSKALGFDIDFKLFRKEFSQRGKLNKLSYFTTLVDS--EEF 58

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S + PL+DWL YNG+  V K  KE+ +  GR++VK ++ VE+ +   +    ++H++I +
Sbjct: 59  SSVKPLVDWLSYNGYNTVTKPVKEYVDTAGRRKVKGNISVEMTIAVLDMVPFVDHIIIVT 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
           GD  F  LV A+Q++  +V++VS++   P M SD LRRQAD F++L  L++ I +  
Sbjct: 119 GDKDFKPLVEAVQQRGTRVSVVSSIRVQPPMLSDDLRRQADNFIELDELRSVIEKPH 175


>gi|37522591|ref|NP_925968.1| hypothetical protein gll3022 [Gloeobacter violaceus PCC 7421]
 gi|35213592|dbj|BAC90963.1| gll3022 [Gloeobacter violaceus PCC 7421]
          Length = 216

 Score =  161 bits (407), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 57/176 (32%), Positives = 96/176 (54%), Gaps = 12/176 (6%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
           R ++A+FIDG+NL+ ++  LG +IDY KLL    + + ++R+++YT V    E+Q     
Sbjct: 19  RGRVAIFIDGSNLFYAALQLGIEIDYTKLLNRLTNGSRLLRSFFYTGVDRANEKQ----Q 74

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
             L W+  NG++V+ K   +  +       K+++DVE+AVD    +   +  ++ SGDG 
Sbjct: 75  GFLLWMRRNGYRVITKDLVQLPDGS----KKANLDVEIAVDMLSLAGSYDTAILVSGDGD 130

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
               V A   K  +V +VS      SM SD L   AD ++DL  +K +I + P ++
Sbjct: 131 LAYAVNAASYKGVRVEVVS----LRSMTSDYLINVADRYIDLEQIKEDIQKAPRQN 182


>gi|284052456|ref|ZP_06382666.1| hypothetical protein AplaP_13393 [Arthrospira platensis str.
           Paraca]
 gi|291571487|dbj|BAI93759.1| hypothetical protein [Arthrospira platensis NIES-39]
          Length = 205

 Score =  160 bits (406), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 59/180 (32%), Positives = 97/180 (53%), Gaps = 12/180 (6%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           + + R ++A+FIDG+NL+ ++  LG +IDY KLL    S + ++R+++YT V    E+Q 
Sbjct: 18  ILENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTSGSRLLRSFFYTGVDRTNEKQ- 76

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
                 L W+  NG++VVAK   +  +       K+++DVE+AVD        +  V+ S
Sbjct: 77  ---QGFLLWMRRNGYRVVAKDLVQLPDGS----KKANLDVEIAVDMIALVGAYDTAVLVS 129

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG     V  +  +  +V ++S      SM SD L   AD ++DL  +K+EI + P   
Sbjct: 130 GDGDLAYAVDCVSYRGVRVEVIS----LRSMTSDSLINVADRYIDLEAIKDEIQKTPRSP 185


>gi|282896531|ref|ZP_06304551.1| Protein of unknown function DUF88 [Raphidiopsis brookii D9]
 gi|281198637|gb|EFA73518.1| Protein of unknown function DUF88 [Raphidiopsis brookii D9]
          Length = 248

 Score =  160 bits (406), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 56/178 (31%), Positives = 97/178 (54%), Gaps = 12/178 (6%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            + R ++A+FIDG+NL+ ++  LG +IDY KLL      + ++RA++YT V    E+Q  
Sbjct: 56  LENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRAFFYTGVDRTNEKQ-- 113

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
                L W+  NG++V+AK   +  +       K+++DVE+AVD     +  +  V+ SG
Sbjct: 114 --QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDMMALVDSYDTAVLVSG 167

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
           DG     V ++  +  +V +VS      SM SD L   +D ++DL  ++ +I + P +
Sbjct: 168 DGDLAYAVNSVSYRGVRVEVVS----LRSMTSDSLINVSDRYIDLEAIREDIQKTPRQ 221


>gi|94985935|ref|YP_605299.1| hypothetical protein Dgeo_1835 [Deinococcus geothermalis DSM 11300]
 gi|94556216|gb|ABF46130.1| protein of unknown function DUF88 [Deinococcus geothermalis DSM
           11300]
          Length = 194

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 62/181 (34%), Positives = 101/181 (55%), Gaps = 11/181 (6%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
            E+IALFIDGAN+YA++K LG++ D+RK+L+ FRS   +  A+YYT V    + +     
Sbjct: 2   TERIALFIDGANVYAAAKRLGWNFDHRKMLEFFRSYGSLHNAFYYTAVPLPMDDKQKR-- 59

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
             +D L Y G+ V  +  +E T+  G    ++S+D+E+  D    S+  +  V+ +GDG 
Sbjct: 60  -FIDALTYMGYTVRTRPLRESTDEHGDTHRRASLDIEIVTDLLTTSDRFDTAVLLTGDGD 118

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA----RDPDED 180
           F   V  L+ + K+V + S     P M S +LR  AD ++DL  ++ ++     R P E 
Sbjct: 119 FERPVEVLRARGKRVVVASI----PEMTSYELRNAADEYVDLGAIREQVERLGYRLPSEQ 174

Query: 181 K 181
           +
Sbjct: 175 R 175


>gi|298492951|ref|YP_003723128.1| hypothetical protein Aazo_4859 ['Nostoc azollae' 0708]
 gi|298234869|gb|ADI66005.1| protein of unknown function DUF88 ['Nostoc azollae' 0708]
          Length = 210

 Score =  159 bits (403), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 57/178 (32%), Positives = 97/178 (54%), Gaps = 12/178 (6%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            + R ++A+FIDG+NL+ ++  LG +IDY KLL      + ++RA++YT V    E+Q  
Sbjct: 18  LENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRAFFYTGVDRTNEKQ-- 75

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
                L W+  NG++V+AK   +  +       K+++DVE+AVD     +  +  V+ SG
Sbjct: 76  --QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDMMALVDSYDTAVLVSG 129

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
           DG     V ++  +  +V +VS      SM SD L   +D ++DL  +K +I + P +
Sbjct: 130 DGDLAYAVNSVSYRGVRVEVVS----LRSMTSDSLINVSDRYIDLEAIKEDIQKTPRQ 183


>gi|15807658|ref|NP_295720.1| hypothetical protein DR_1997m [Deinococcus radiodurans R1]
 gi|970086|dbj|BAA09936.1| ORF1 [Deinococcus radiodurans]
          Length = 200

 Score =  159 bits (401), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 61/172 (35%), Positives = 95/172 (55%), Gaps = 7/172 (4%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
            E+IALFIDGAN+YA++K LG++ D+RK+L+ F     +  A+YYT V    + +     
Sbjct: 1   MERIALFIDGANVYAAAKRLGWNFDHRKILEHFAGLGALYNAFYYTAVPWPVDDKQKR-- 58

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
             +D L Y G+ V  +  +E T+  G    ++S+D+EL  D        +  V+ SGDG 
Sbjct: 59  -FVDALTYMGYTVRTRPLRENTDENGDTSRRASLDIELVTDLLTTESRYDVAVLLSGDGD 117

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
           F   V  L+ + KKV + S     P M S +LR  AD ++DLA ++ ++ R 
Sbjct: 118 FERPVEVLRARGKKVIVASI----PEMTSAELRNAADEYVDLASIREQVERP 165


>gi|186680639|ref|YP_001863835.1| hypothetical protein Npun_R0091 [Nostoc punctiforme PCC 73102]
 gi|186463091|gb|ACC78892.1| protein of unknown function DUF88 [Nostoc punctiforme PCC 73102]
          Length = 210

 Score =  158 bits (400), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 56/178 (31%), Positives = 97/178 (54%), Gaps = 12/178 (6%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            + R ++A+FIDG+NL+ ++  LG +IDY KLL      + ++R+++YT V    E+Q  
Sbjct: 18  LENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRSFFYTGVDRTNEKQ-- 75

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
                L W+  NG++V+AK   +  +       K+++DVE+AVD     +  +  V+ SG
Sbjct: 76  --QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDMMALVDSYDTAVLVSG 129

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
           DG     V ++  +  +V +VS      SM SD L   +D ++DL  +K +I + P +
Sbjct: 130 DGDLAYAVNSVSYRGVRVEVVS----LRSMTSDSLINVSDRYIDLEAIKEDIQKTPRQ 183


>gi|218248715|ref|YP_002374086.1| hypothetical protein PCC8801_3991 [Cyanothece sp. PCC 8801]
 gi|257061778|ref|YP_003139666.1| hypothetical protein Cyan8802_4033 [Cyanothece sp. PCC 8802]
 gi|218169193|gb|ACK67930.1| protein of unknown function DUF88 [Cyanothece sp. PCC 8801]
 gi|256591944|gb|ACV02831.1| protein of unknown function DUF88 [Cyanothece sp. PCC 8802]
          Length = 226

 Score =  158 bits (399), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 58/179 (32%), Positives = 95/179 (53%), Gaps = 12/179 (6%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            + R ++A+FIDG+NL+ ++  LG +IDY KLL      + ++RA++YT V    E+Q  
Sbjct: 42  LENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRAFFYTGVDRTNEKQ-- 99

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
                L W+  NG++V+AK   +  +       K+++DVE+AVD        +  VI SG
Sbjct: 100 --QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDLMALVGSYDTAVIVSG 153

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           DG       A+  +  ++ +VS      SM SD L   AD ++DL  +K +I + P  +
Sbjct: 154 DGDLAYAADAVSYRGSRIEVVS----LRSMTSDSLINVADRYIDLDQIKEDIQKSPKPN 208


>gi|284929296|ref|YP_003421818.1| hypothetical protein UCYN_07430 [cyanobacterium UCYN-A]
 gi|284809740|gb|ADB95437.1| uncharacterized conserved protein [cyanobacterium UCYN-A]
          Length = 227

 Score =  158 bits (399), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 56/180 (31%), Positives = 96/180 (53%), Gaps = 12/180 (6%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M + R ++A+FIDG+NL+ ++  LG +IDY +LL      + ++RA++YT V    E+Q 
Sbjct: 42  MLENRGRVAIFIDGSNLFYAALQLGIEIDYTRLLYRLTEGSRLLRAFFYTGVDRTNEKQ- 100

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
                 L W+  NG++V+AK   +  +       K+++DVE+AVD        +  +I S
Sbjct: 101 ---QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDLMALVGSYDTAIIVS 153

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG       ++  +  +V +VS      SM SD L   AD+++DL  +K +I +    +
Sbjct: 154 GDGDLAYAANSVSYRGARVEVVS----LRSMTSDSLINVADHYIDLDQIKEDIQKTSRTN 209


>gi|17227728|ref|NP_484276.1| hypothetical protein all0232 [Nostoc sp. PCC 7120]
 gi|75908934|ref|YP_323230.1| hypothetical protein Ava_2722 [Anabaena variabilis ATCC 29413]
 gi|17135210|dbj|BAB77756.1| all0232 [Nostoc sp. PCC 7120]
 gi|75702659|gb|ABA22335.1| Protein of unknown function DUF88 [Anabaena variabilis ATCC 29413]
          Length = 209

 Score =  157 bits (398), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 57/178 (32%), Positives = 97/178 (54%), Gaps = 12/178 (6%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            + R ++A+FIDG+NL+ ++  LG +IDY KLL      + ++RA++YT V    E+Q  
Sbjct: 17  LENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRAFFYTGVDRTNEKQ-- 74

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
                L W+  NG++V+AK   +  +       K+++DVE+AVD     +  +  V+ SG
Sbjct: 75  --QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDMMALVDSYDTAVLVSG 128

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
           DG     V ++  +  +V +VS      SM SD L   +D ++DL  +K +I + P +
Sbjct: 129 DGDLAYAVNSVSYRGVRVEVVS----LRSMTSDSLINVSDRYIDLEAIKEDIQKTPRQ 182


>gi|332707287|ref|ZP_08427340.1| hypothetical protein LYNGBM3L_34690 [Lyngbya majuscula 3L]
 gi|332354021|gb|EGJ33508.1| hypothetical protein LYNGBM3L_34690 [Lyngbya majuscula 3L]
          Length = 200

 Score =  157 bits (398), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 56/179 (31%), Positives = 97/179 (54%), Gaps = 12/179 (6%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            + R ++A+FIDG+NL+ ++  LG +IDY KLL    + + ++R+++YT V    E+Q  
Sbjct: 17  LENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTAGSRLLRSFFYTGVDRTNEKQ-- 74

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
                L W+  NG++V+AK   +  +       K+++DVE+AVD        +  V+ SG
Sbjct: 75  --QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDMMALVGSYDTAVLVSG 128

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           DG     V ++  +  +V +VS      SM SD L   AD ++DL  ++  I + P ++
Sbjct: 129 DGDLAYAVDSVSYRGVRVEVVS----LRSMTSDSLINVADRYIDLDTIQESIQKTPKQN 183


>gi|16331574|ref|NP_442302.1| hypothetical protein slr0650 [Synechocystis sp. PCC 6803]
 gi|1001641|dbj|BAA10372.1| slr0650 [Synechocystis sp. PCC 6803]
          Length = 201

 Score =  157 bits (396), Expect = 9e-37,   Method: Composition-based stats.
 Identities = 57/179 (31%), Positives = 95/179 (53%), Gaps = 12/179 (6%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            + R ++A+FIDG+NL+ ++  LG +IDY KLL      + ++RA++YT V    E+Q  
Sbjct: 17  LENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLHCLTGGSRLLRAFFYTGVDRSNEKQ-- 74

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
                L W+  NG++V+AK   +  +       K+++DVE+AVD        +  V+ SG
Sbjct: 75  --QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDLMSLVGSYDTAVVVSG 128

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           DG       A+  +  ++ +VS      SM SD L   +D ++DL  +K EI + P  +
Sbjct: 129 DGDLAYAADAVSYRGARIEVVS----LRSMTSDSLINVSDRYVDLDSIKEEIQKQPRPN 183


>gi|58040236|ref|YP_192200.1| hypothetical protein GOX1805 [Gluconobacter oxydans 621H]
 gi|58002650|gb|AAW61544.1| Hypothetical protein GOX1805 [Gluconobacter oxydans 621H]
          Length = 202

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 79/180 (43%), Positives = 114/180 (63%), Gaps = 2/180 (1%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
               E+ ALFIDGA+L+ +++ LGF++D+R L   F S+ +  RA+YY  +       +S
Sbjct: 3   LRQNERTALFIDGASLHHAARNLGFEVDFRSLRNLFESQCLFQRAFYYAAMPET--DDYS 60

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
           PL PL DWL YNG+ +V K A+EFT++ GR+R+K +MDVEL VD  EQ+  L+H VI SG
Sbjct: 61  PLRPLTDWLAYNGYHLVLKNAREFTDHSGRRRIKGNMDVELTVDLLEQASRLDHAVIVSG 120

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
           D      V A+Q +  +VT++S++ S P M  D LRRQAD F++LA +     R   E +
Sbjct: 121 DSDLRRAVEAVQARGVRVTVISSMRSTPLMIGDDLRRQADLFVELADIAPSFTRRQAEPR 180


>gi|113475474|ref|YP_721535.1| hypothetical protein Tery_1805 [Trichodesmium erythraeum IMS101]
 gi|110166522|gb|ABG51062.1| protein of unknown function DUF88 [Trichodesmium erythraeum IMS101]
          Length = 204

 Score =  156 bits (395), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 53/180 (29%), Positives = 95/180 (52%), Gaps = 12/180 (6%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           + + R ++A+FIDG+NL+ ++  LG +IDY KLL      + ++R+++YT V    E+Q 
Sbjct: 20  ILENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRSFFYTGVDRTNEKQ- 78

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
                 L W+  NG++V++K   +  +       K+++DVE+AVD        +  ++ S
Sbjct: 79  ---QGFLLWMRRNGYRVISKDLVQLPDGS----KKANLDVEIAVDMMALVGSYDTAILVS 131

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG     V A+  +  +V +VS      +M SD L   +D ++DL  +K +I +     
Sbjct: 132 GDGDLAYAVDAVSYRGVRVEVVS----LRAMTSDSLINVSDRYIDLEQIKEDIQKTSKSP 187


>gi|240141795|ref|YP_002966303.1| hypothetical protein MexAM1_META2p0024 [Methylobacterium extorquens
           AM1]
 gi|240011737|gb|ACS42962.1| hypothetical protein DUF88 [Methylobacterium extorquens AM1]
          Length = 185

 Score =  156 bits (394), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 83/176 (47%), Positives = 128/176 (72%), Gaps = 3/176 (1%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           + A+FIDGANLY+++KA+GFDIDY+KLL  ++    ++R  YYT +  D   ++S L PL
Sbjct: 5   RTAVFIDGANLYSTTKAIGFDIDYKKLLAHYKRDG-LLRINYYTALYDD--GEYSSLRPL 61

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126
           LDWL YNG++V++K AKE+T++ GR++ K ++D+E+AVDA E +  ++ +V+FSGDG F 
Sbjct: 62  LDWLDYNGYRVISKPAKEWTDSAGRRKTKGNLDIEIAVDALELAPHIDRMVLFSGDGDFR 121

Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182
            LV A+QR+  +V +VST+ + P+M SD+LRRQAD F+DLA +   I +   +  +
Sbjct: 122 YLVEAMQRRGVRVVVVSTIQTQPAMVSDELRRQADEFVDLAKMMETIGQTDTDRPQ 177


>gi|158335465|ref|YP_001516637.1| hypothetical protein AM1_2313 [Acaryochloris marina MBIC11017]
 gi|158305706|gb|ABW27323.1| conserved hypothetical protein [Acaryochloris marina MBIC11017]
          Length = 210

 Score =  156 bits (394), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 56/178 (31%), Positives = 93/178 (52%), Gaps = 12/178 (6%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            + R +IA+FIDG+NL+ ++  LG +IDY KLL      + ++R+++YT V    E+Q  
Sbjct: 19  LENRGRIAIFIDGSNLFYAALQLGIEIDYTKLLCRLTCGSRLLRSFFYTGVDPTNEKQ-- 76

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
                L W+  NG++V+ K   +  +       K+++DVE+AVD        +  ++ SG
Sbjct: 77  --QGFLLWMRRNGYRVITKELVQLPDGS----KKANLDVEIAVDMMSLVGCYDTAILVSG 130

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
           DG     V A+  +  +V +VS      SM SD L   AD ++DL  +K +I +    
Sbjct: 131 DGDLAYAVDAVSYRGIRVEVVS----LRSMTSDSLINVADRYIDLEGIKGDIQKASRS 184


>gi|119512208|ref|ZP_01631298.1| hypothetical protein N9414_13695 [Nodularia spumigena CCY9414]
 gi|119463174|gb|EAW44121.1| hypothetical protein N9414_13695 [Nodularia spumigena CCY9414]
          Length = 209

 Score =  155 bits (393), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 56/178 (31%), Positives = 98/178 (55%), Gaps = 12/178 (6%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            + R ++A+FIDG+NL+ ++  LG +IDY KLL      + ++R+++YT V    E+Q  
Sbjct: 17  LENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTGGSRLLRSFFYTGVDRTNEKQ-- 74

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
                L W+  NG++V+AK   +  +       K+++DVE+AVD     +  +  V+ SG
Sbjct: 75  --QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDMMALVDSYDTAVLVSG 128

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
           DG     V ++  +  +V +VS      SM SD L   +D ++DL  +K +I ++P +
Sbjct: 129 DGDLAYAVNSVSYRGVRVEVVS----LRSMTSDSLINVSDRYIDLEAIKEDIQKNPRQ 182


>gi|254424426|ref|ZP_05038144.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
 gi|196191915|gb|EDX86879.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
          Length = 211

 Score =  155 bits (392), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 57/179 (31%), Positives = 94/179 (52%), Gaps = 12/179 (6%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            + R ++A+FIDG+NL+ ++  LG +IDY KLL    S + + R+++YT V    E+Q  
Sbjct: 20  LENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLSRLTSGSRLFRSFFYTGVDRSNEKQ-- 77

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
                L W+  NG++V+AK   +  +       K+++DVE+AVD        +  V+ SG
Sbjct: 78  --QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDMMALVGCYDTAVLVSG 131

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           DG     V A   K  +V +VS      +M SD L   +D ++DL  +K +I +    +
Sbjct: 132 DGDLAYAVDAASYKGVRVEVVS----LRAMTSDSLINVSDRYIDLDSIKEDICKTSRAN 186


>gi|226356860|ref|YP_002786600.1| hypothetical protein Deide_18580 [Deinococcus deserti VCD115]
 gi|226318850|gb|ACO46846.1| Conserved hypothetical protein [Deinococcus deserti VCD115]
          Length = 197

 Score =  155 bits (392), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 57/181 (31%), Positives = 97/181 (53%), Gaps = 11/181 (6%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
            E+IALFIDGAN+YA++K LG++ D+RK+L+ F ++  +  A+YYT V    + +     
Sbjct: 1   MERIALFIDGANVYAAAKRLGWNFDHRKILEHFAAQGRLYNAFYYTAVPMPIDDKQKR-- 58

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
              D L Y G+ V  +  +E T+  G    ++++DVE+  D    ++  +  V+ +GDG 
Sbjct: 59  -FTDALTYMGYTVRTRPLRESTDEHGDTSRRANLDVEIVTDLLTTADRYDTAVLLTGDGD 117

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD----PDED 180
           F   V  L+ + K+V + S       M S +LR  AD ++D   ++  + R     P E 
Sbjct: 118 FERPVEVLRARGKRVVVASIA----EMTSYELRNAADEYVDFKDIRVHVERPGYRLPSEQ 173

Query: 181 K 181
           +
Sbjct: 174 R 174


>gi|300867847|ref|ZP_07112489.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
 gi|300334178|emb|CBN57665.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
          Length = 201

 Score =  154 bits (389), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 56/179 (31%), Positives = 96/179 (53%), Gaps = 12/179 (6%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            + R ++A+FIDG+NL+ ++  LG +IDY KLL    + + ++R+++YT V    E+Q  
Sbjct: 17  LENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTAGSRLLRSFFYTGVDRTNEKQ-- 74

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
                L W+  NG++V++K   +  +       K+++DVE+AVD        +  V+ SG
Sbjct: 75  --QGFLLWMRRNGYRVISKDLVQLPDGS----KKANLDVEIAVDMMALVGSYDTAVLVSG 128

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           DG     V A+  +  +V +VS      SM SD L   AD ++DL  +K +I +    +
Sbjct: 129 DGDLAYAVDAVSYRGVRVEVVS----LRSMTSDSLINVADRYIDLESIKEDIQKTNRPN 183


>gi|320335491|ref|YP_004172202.1| hypothetical protein Deima_2908 [Deinococcus maricopensis DSM
           21211]
 gi|319756780|gb|ADV68537.1| Domain of unknown function DUF88 [Deinococcus maricopensis DSM
           21211]
          Length = 192

 Score =  153 bits (386), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 57/181 (31%), Positives = 97/181 (53%), Gaps = 11/181 (6%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
            E+I LFIDGAN+YA++K LG++ D+RK+L+ F     +  A+YYT V    + +     
Sbjct: 1   MERIGLFIDGANVYAAAKRLGWNFDHRKILEHFAGYGRLYNAFYYTAVPTPVDDKQKR-- 58

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
             +D L Y G+ V  K+ +E T+  G    ++++D+ L  D    ++  +  ++ +GDG 
Sbjct: 59  -FIDALTYMGYTVRTKMLRENTDEHGDTHRRANLDILLVTDLLATADLYDTAILLTGDGD 117

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD----PDED 180
           F   V  L+ K K+V + S     P M S +LR  AD ++D   ++ ++ R     P E 
Sbjct: 118 FERPVEVLRAKGKRVIVASI----PEMTSYELRNAADAYVDFKDIRGDVERPGYRLPSEG 173

Query: 181 K 181
           +
Sbjct: 174 R 174


>gi|218437105|ref|YP_002375434.1| hypothetical protein PCC7424_0096 [Cyanothece sp. PCC 7424]
 gi|218169833|gb|ACK68566.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7424]
          Length = 201

 Score =  153 bits (386), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 58/179 (32%), Positives = 95/179 (53%), Gaps = 12/179 (6%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           + + R ++A+FIDG+NL+ ++  LG +IDY KLL    + + ++RA++YT V    E+Q 
Sbjct: 16  ILENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLYRLTNGSKLLRAFFYTGVDRSNEKQ- 74

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
                 L W+  NG++V+AK   +  +       K+++DVE+AVD        +  VI S
Sbjct: 75  ---QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDLMSLVGSYDTAVIVS 127

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
           GDG       A+  +  +V +VS      SM SD L   AD ++DL  +K +I +    
Sbjct: 128 GDGDLAYAANAVSYQGARVEVVS----LRSMTSDSLINVADRYVDLDQIKEDIQKHQKA 182


>gi|307151237|ref|YP_003886621.1| hypothetical protein Cyan7822_1345 [Cyanothece sp. PCC 7822]
 gi|306981465|gb|ADN13346.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7822]
          Length = 222

 Score =  152 bits (384), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 58/179 (32%), Positives = 95/179 (53%), Gaps = 12/179 (6%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           + + R ++A+FIDG+NL+ ++  LG +IDY KLL    + + ++RA++YT V    E+Q 
Sbjct: 37  ILENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLFRLTNGSKLLRAFFYTGVDRSNEKQ- 95

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
                 L W+  NG++V+AK   +  +       K+++DVE+AVD        +  VI S
Sbjct: 96  ---QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDLMSLVGSYDTAVIVS 148

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
           GDG       A+  +  +V +VS      SM SD L   AD ++DL  +K +I +    
Sbjct: 149 GDGDLAYAANAVSYRGARVEVVS----LRSMTSDSLINVADRYVDLDQIKEDIQKHAKA 203


>gi|166367025|ref|YP_001659298.1| hypothetical protein MAE_42840 [Microcystis aeruginosa NIES-843]
 gi|166089398|dbj|BAG04106.1| hypothetical protein MAE_42840 [Microcystis aeruginosa NIES-843]
          Length = 201

 Score =  152 bits (384), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 58/177 (32%), Positives = 94/177 (53%), Gaps = 12/177 (6%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            + R ++A+FIDG+NL+ ++  LG +IDY KLL    + + ++RA++YT V    E+Q  
Sbjct: 17  LENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTAGSRLLRAFFYTGVDRTNEKQ-- 74

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
                L W+  NG++V+AK   +  +       K+++DVE+AVD        +  VI SG
Sbjct: 75  --QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDLMALVGSYDTAVIVSG 128

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
           DG       ++  +  +V +VS      SM SD L   AD ++DL  +K EI +   
Sbjct: 129 DGDLAYAADSVSYRGARVEVVS----LRSMTSDSLINVADRYVDLDQIKEEIQKTSK 181


>gi|172036862|ref|YP_001803363.1| hypothetical protein cce_1947 [Cyanothece sp. ATCC 51142]
 gi|171698316|gb|ACB51297.1| unknown [Cyanothece sp. ATCC 51142]
          Length = 225

 Score =  152 bits (384), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 55/179 (30%), Positives = 94/179 (52%), Gaps = 12/179 (6%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            + R ++A+FIDG+NL+ ++  LG +IDY KLL      + ++RA++YT V    E+Q  
Sbjct: 42  LENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLYRLTEGSRLLRAFFYTGVDRTNEKQ-- 99

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
                L W+  NG++V+AK   +  +       K+++DVE+AVD        +  +I SG
Sbjct: 100 --QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDLMALVGSYDTAIIVSG 153

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           DG       ++  +  ++ +VS      SM SD L   AD ++DL  +K +I +    +
Sbjct: 154 DGDLAYAADSVSYRGARIEVVS----LRSMTSDSLINVADRYIDLDQIKEDIQKTRKPN 208


>gi|159029235|emb|CAO87595.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 201

 Score =  152 bits (384), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 58/177 (32%), Positives = 94/177 (53%), Gaps = 12/177 (6%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            + R ++A+FIDG+NL+ ++  LG +IDY KLL    + + ++RA++YT V    E+Q  
Sbjct: 17  LENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCRLTAGSRLLRAFFYTGVDRTNEKQ-- 74

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
                L W+  NG++V+AK   +  +       K+++DVE+AVD        +  VI SG
Sbjct: 75  --QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDLMALVGSYDTAVIVSG 128

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
           DG       ++  +  +V +VS      SM SD L   AD ++DL  +K EI +   
Sbjct: 129 DGDLAYAADSVSYRGARVEVVS----LRSMTSDSLINVADRYVDLDQIKEEIQKTSK 181


>gi|126656216|ref|ZP_01727600.1| hypothetical protein CY0110_03999 [Cyanothece sp. CCY0110]
 gi|126622496|gb|EAZ93202.1| hypothetical protein CY0110_03999 [Cyanothece sp. CCY0110]
          Length = 225

 Score =  152 bits (384), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 55/179 (30%), Positives = 94/179 (52%), Gaps = 12/179 (6%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            + R ++A+FIDG+NL+ ++  LG +IDY KLL      + ++RA++YT V    E+Q  
Sbjct: 42  LENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLYRLTEGSRLLRAFFYTGVDRTNEKQ-- 99

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
                L W+  NG++V+AK   +  +       K+++DVE+AVD        +  +I SG
Sbjct: 100 --QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDLMALVGSYDTAIIVSG 153

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           DG       ++  +  ++ +VS      SM SD L   AD ++DL  +K +I +    +
Sbjct: 154 DGDLAYAADSVSYRGARIEVVS----LRSMTSDSLINVADRYIDLDQIKEDIQKTRKPN 208


>gi|170079300|ref|YP_001735938.1| hypothetical protein SYNPCC7002_A2707 [Synechococcus sp. PCC 7002]
 gi|169886969|gb|ACB00683.1| conserved hypothetical protein [Synechococcus sp. PCC 7002]
          Length = 204

 Score =  152 bits (383), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 56/179 (31%), Positives = 94/179 (52%), Gaps = 12/179 (6%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            + R ++A+FIDG+NL+ ++  LG +IDY KLL      + ++R+++YT V    E+Q  
Sbjct: 17  LENRGRVAIFIDGSNLFYAALQLGIEIDYSKLLYRLTGGSRLLRSFFYTGVDRANEKQ-- 74

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
                L W+  NG++V+AK   +  +       K+++DVE+AVD        +  V+ SG
Sbjct: 75  --QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDMMALVGSYDTAVLVSG 128

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           DG     V A+  +  +V +VS      SM SD L   AD ++DL  ++ +I +     
Sbjct: 129 DGDLAYAVDAVSYRGARVEVVS----LRSMTSDSLINVADRYIDLEQIQTDIQKLHRGQ 183


>gi|186686260|ref|YP_001869456.1| hypothetical protein Npun_R6229 [Nostoc punctiforme PCC 73102]
 gi|186468712|gb|ACC84513.1| protein of unknown function DUF88 [Nostoc punctiforme PCC 73102]
          Length = 231

 Score =  150 bits (378), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 59/173 (34%), Positives = 92/173 (53%), Gaps = 12/173 (6%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            R ++A+FIDG NL+ ++  LG +IDY KLL    + + ++RA++YT V    E+Q    
Sbjct: 56  NRGRVAIFIDGLNLFHTALQLGIEIDYVKLLCHLTNGSRLLRAFFYTGVDNSNEKQ---- 111

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
              L W+  NG++VVAK   +          KS+++VE+AVD    +   +  V+ SGDG
Sbjct: 112 QGFLLWMRRNGYRVVAKDIMQ----PAENFKKSNLNVEIAVDMITLAPYYDTAVLVSGDG 167

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
                V A+ R   +V +VS   +     S+ L   AD F+DL  +K  I +D
Sbjct: 168 DLAYAVNAVSRMGVRVEVVSLQTT----TSESLIDVADCFIDLDSIKAHIQKD 216


>gi|254510985|ref|ZP_05123052.1| hypothetical protein RKLH11_1520 [Rhodobacteraceae bacterium KLH11]
 gi|221534696|gb|EEE37684.1| hypothetical protein RKLH11_1520 [Rhodobacteraceae bacterium KLH11]
          Length = 183

 Score =  149 bits (376), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 73/178 (41%), Positives = 113/178 (63%), Gaps = 2/178 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           MF   E  A+F+DG NL+ S+KALGFD+DY +L      +  ++RA Y+T ++     ++
Sbjct: 3   MFHQNETTAIFVDGYNLHHSAKALGFDVDYERLKSMVEKQCHLLRATYFTMLIE--RDEY 60

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
               PL+D+L YNG+ V AK A+EF    GR R K  ++V+LA+ A   +  + H V+F+
Sbjct: 61  IATRPLVDFLQYNGWTVTAKDAREFVHGDGRSRFKGRIEVDLALAAARITPHINHAVLFT 120

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
           G   F  LV  LQ +  +V++VST+ ++P +ASDQLRR+AD F++LA +++ IAR   
Sbjct: 121 GSQDFCPLVEYLQDQGVRVSVVSTIKTEPILASDQLRRKADKFIELADIRDVIARPDR 178


>gi|6136304|gb|AAF04325.1| unknown [Bradyrhizobium japonicum]
          Length = 149

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 78/138 (56%), Positives = 108/138 (78%), Gaps = 2/138 (1%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
           P  KIALFIDGANLYA++K LGFDIDY++LLK F+SR  ++RA+YYT ++ D  Q++S +
Sbjct: 5   PTNKIALFIDGANLYATAKTLGFDIDYKRLLKEFQSRGTLLRAFYYTAIIED--QEYSSI 62

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
            PL+DWL YNG+ VV K  KEF +  GR++VK +MD+ELAVDA E +E ++ +V+FSGDG
Sbjct: 63  RPLIDWLDYNGYTVVTKATKEFIDASGRRKVKGNMDIELAVDAMELAEHIDQMVLFSGDG 122

Query: 124 CFTTLVAALQRKVKKVTI 141
            F +LV A+QR+  +VT+
Sbjct: 123 DFRSLVEAVQRRGVRVTV 140


>gi|325282672|ref|YP_004255213.1| hypothetical protein Deipr_0426 [Deinococcus proteolyticus MRP]
 gi|324314481|gb|ADY25596.1| Domain of unknown function DUF88 [Deinococcus proteolyticus MRP]
          Length = 214

 Score =  148 bits (374), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 54/173 (31%), Positives = 92/173 (53%), Gaps = 7/173 (4%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
             ++IALF+DGA++Y+++K LG++ D+RK+L+ FR R  +  A+YYT +    + +    
Sbjct: 2   NSQRIALFVDGASIYSAAKRLGWNFDHRKVLEYFRERGRLHNAFYYTALPAQFDDKQKR- 60

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
               D L Y G+ V  +  +E  +  G    ++S+D+EL  D     +  +  V+ SG G
Sbjct: 61  --FTDALTYMGYTVRTQPLRETVDESGVSYRQTSLDIELVTDLLTGLDHFDAAVLMSGGG 118

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
            F   +  L+ + K+  +VS     P M S +LR  AD ++DL  L+    R 
Sbjct: 119 GFERPLEVLRARGKRTVVVSI----PEMTSYELRNAADEYLDLRDLRQRFERP 167


>gi|300712124|ref|YP_003737938.1| hypothetical protein HacjB3_13825 [Halalkalicoccus jeotgali B3]
 gi|299125807|gb|ADJ16146.1| hypothetical protein HacjB3_13825 [Halalkalicoccus jeotgali B3]
          Length = 165

 Score =  148 bits (373), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 80/170 (47%), Gaps = 14/170 (8%)

Query: 3   DPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            P +++A+ +D  NLY S+ +    +IDY  LL+       ++RA  Y      PE++  
Sbjct: 5   HPNQRVAVLVDSQNLYHSAHSLYSRNIDYSALLEEAVGGRELVRAIAYVIRADSPEEES- 63

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
                 + L   GF+   K  K F +       K+  DV +++DA   +  ++ +V+ +G
Sbjct: 64  ----FFEALIDIGFETKIKDIKTFGDGS----KKADWDVGMSLDAVTLASHVDTVVLCTG 115

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
           DG F+ L + L+ +  +V +++         +++L    D F+DL   + 
Sbjct: 116 DGDFSRLCSHLRHQGVRVEVMALG----PSTAEELIEATDSFVDLTDREE 161


>gi|86607727|ref|YP_476489.1| hypothetical protein CYB_0228 [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86556269|gb|ABD01226.1| conserved hypothetical protein [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 200

 Score =  148 bits (373), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 60/176 (34%), Positives = 98/176 (55%), Gaps = 12/176 (6%)

Query: 3   DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
           D R ++A+FIDG+NL+ ++  LG +IDY +LLK    R+ ++R+++YT V  + E+Q   
Sbjct: 18  DNRGRVAIFIDGSNLFYAALQLGIEIDYTRLLKTLSGRSPLLRSFFYTGVDRNNEKQ--- 74

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
               L W+  NG++VV K   +  +       ++++DVE+AVD        E  V+ SGD
Sbjct: 75  -QGFLLWMRRNGYRVVTKELTQLPDGS----KRANLDVEIAVDMLSLVRWYETAVLVSGD 129

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
           G     V A+  +  +V +VS      SM SDQL   AD ++DL  +K++I +   
Sbjct: 130 GDLAYAVNAVSYQGARVEVVS----LRSMTSDQLINLADRYIDLESIKDQIKKTNR 181


>gi|113969424|ref|YP_733217.1| hypothetical protein Shewmr4_1080 [Shewanella sp. MR-4]
 gi|113884108|gb|ABI38160.1| protein of unknown function DUF88 [Shewanella sp. MR-4]
          Length = 184

 Score =  145 bits (367), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 13/167 (7%)

Query: 3   DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
           +P ++IALF+D  N+Y + + A     +Y KL +   ++  ++ A  Y    GD  Q   
Sbjct: 26  NPLKRIALFVDVQNIYYTCREAYQRQFNYCKLWQQLSAQGEIVSAIAYAIHRGDDGQ--- 82

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
                 D L + GF++  K   + ++       K   DV + +D  E +  ++ +++ SG
Sbjct: 83  --LKFQDALRHIGFELKLKPFIQRSDGSA----KGDWDVGITIDVLEMAPEVDTVILLSG 136

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
           DG F  L+  +++   K  I + V   PS+ +  L   A  F  +  
Sbjct: 137 DGDFALLLDKIRQ---KYAIEAEVYGVPSLTAKSLMEAASCFHPIEE 180


>gi|86605182|ref|YP_473945.1| hypothetical protein CYA_0464 [Synechococcus sp. JA-3-3Ab]
 gi|86553724|gb|ABC98682.1| conserved hypothetical protein [Synechococcus sp. JA-3-3Ab]
          Length = 198

 Score =  145 bits (366), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 59/176 (33%), Positives = 98/176 (55%), Gaps = 12/176 (6%)

Query: 3   DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
           D R ++A+FIDG+NL+ ++  +G +IDY +LLK    R+ ++R+++YT V  + E+Q   
Sbjct: 18  DDRGRVAIFIDGSNLFYAALQMGIEIDYTRLLKTLTGRSPLLRSFFYTGVDRNNEKQ--- 74

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
               L W+  NG++VV K   +  +       ++++DVE+AVD        E  V+ SGD
Sbjct: 75  -QGFLLWMRRNGYRVVTKELTQLPDGS----KRANLDVEIAVDMLSLVRWYETAVLVSGD 129

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
           G     V A+  +  +V +VS      SM SDQL   AD ++DL  +K++I +   
Sbjct: 130 GDLAYAVNAVSYQGARVEVVS----LRSMTSDQLINLADRYIDLESIKDQIKKTNR 181


>gi|284164086|ref|YP_003402365.1| hypothetical protein Htur_0796 [Haloterrigena turkmenica DSM 5511]
 gi|284013741|gb|ADB59692.1| protein of unknown function DUF88 [Haloterrigena turkmenica DSM
           5511]
          Length = 165

 Score =  145 bits (365), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 43/167 (25%), Positives = 82/167 (49%), Gaps = 14/167 (8%)

Query: 3   DPREKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            P +++A+ +D  NLY ++++L   +IDY  LL        + RA  Y      PE++  
Sbjct: 5   HPGQRVAVLVDAQNLYHTAQSLHSRNIDYSALLDKAVQDRQLTRAIAYVIRADSPEEES- 63

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
                 + L   GF+   K  K F++       K+  DV +++DA   +  ++ +V+ +G
Sbjct: 64  ----FFEALIDIGFEPKIKDIKTFSDGT----KKADWDVGMSLDAVTLANHVDTVVLCTG 115

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
           DG F+ L + L+ +  +V +++      S  +++L   AD F+DL  
Sbjct: 116 DGDFSRLCSHLRHEGVRVEVMAF----ESSTAEELIAAADSFVDLGE 158


>gi|110667467|ref|YP_657278.1| hypothetical protein HQ1506A [Haloquadratum walsbyi DSM 16790]
 gi|109625214|emb|CAJ51634.1| conserved hypothetical protein [Haloquadratum walsbyi DSM 16790]
          Length = 165

 Score =  145 bits (365), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 14/166 (8%)

Query: 3   DPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            P +++A+  D  NLY ++++     IDY  LLK   S   + RA  Y      PE++  
Sbjct: 5   HPGQRVAVLADAQNLYHTAQSLYSQKIDYGSLLKKGVSGRELTRAIAYVIQADAPEEE-- 62

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
                 + L   GF+   K  K F +       K+  DV +++DA   +  ++ +V+ +G
Sbjct: 63  ---TFFEALVDIGFEPKIKQIKTFGDGT----KKADWDVGMSLDAVTLANHVDTVVLCTG 115

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
           DG F+ L + L+ +  +V ++S         +D+L   AD F+DL+
Sbjct: 116 DGDFSRLCSHLRHEGVRVEVMSF----RESTADELVDAADTFIDLS 157


>gi|17232221|ref|NP_488769.1| hypothetical protein all4729 [Nostoc sp. PCC 7120]
 gi|75908164|ref|YP_322460.1| hypothetical protein Ava_1943 [Anabaena variabilis ATCC 29413]
 gi|17133866|dbj|BAB76428.1| all4729 [Nostoc sp. PCC 7120]
 gi|75701889|gb|ABA21565.1| Protein of unknown function DUF88 [Anabaena variabilis ATCC 29413]
          Length = 236

 Score =  144 bits (363), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 57/178 (32%), Positives = 91/178 (51%), Gaps = 14/178 (7%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTT-----VVGDPEQ 58
            R ++A+FIDGANL+ ++  LG +IDY KLL    + + ++RA++YT           ++
Sbjct: 53  NRGRVAIFIDGANLFQAALQLGIEIDYLKLLCRLTAGSRLLRAFFYTGVDMSRPTPTRQR 112

Query: 59  QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVI 118
                   L W+  NG++VV K  +    N      K +++VE+AVD    +   +  V+
Sbjct: 113 TNDKQQGFLFWMRRNGYRVVTKELQVTDNN-----KKPNLNVEIAVDMITLAPHYDTAVL 167

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
            SGDG     V A+     +V +VS      +M +D L   ADYF+DL  +K  I +D
Sbjct: 168 VSGDGDLAYAVNAVSSTGVRVEVVS----LRTMTNDCLIDVADYFIDLDSIKQYIQKD 221


>gi|289582398|ref|YP_003480864.1| hypothetical protein Nmag_2746 [Natrialba magadii ATCC 43099]
 gi|289531951|gb|ADD06302.1| protein of unknown function DUF88 [Natrialba magadii ATCC 43099]
          Length = 165

 Score =  144 bits (363), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 45/167 (26%), Positives = 81/167 (48%), Gaps = 14/167 (8%)

Query: 3   DPREKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            P +++A+ +D  NLY S+++L   +IDY  LL        + RA  Y      PE++  
Sbjct: 5   HPGQRVAVLVDAQNLYHSAQSLHSRNIDYSALLSKAVQDRQLTRAIAYVIRADAPEEES- 63

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
                 D L   GF+   K  K F++       K+  DV +++DA   +  ++ +V+ +G
Sbjct: 64  ----FFDALVDIGFETKIKDIKTFSDGT----KKADWDVGMSLDAVTLANHVDTVVLCTG 115

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
           DG F+ L + L+ +  +V +++      S  +D+L    D F+DL  
Sbjct: 116 DGDFSRLCSHLRHEGVRVEVMAF----ESSTADELIDATDTFLDLDE 158


>gi|119776250|ref|YP_928990.1| hypothetical protein Sama_3118 [Shewanella amazonensis SB2B]
 gi|119768750|gb|ABM01321.1| conserved hypothetical protein [Shewanella amazonensis SB2B]
          Length = 157

 Score =  144 bits (362), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 13/165 (7%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            +KIALF+D  N+Y + + A     +YRKL +   S   ++ A  Y     D  Q     
Sbjct: 1   MKKIALFVDVQNIYYTCREAYQRQFNYRKLWQQLCSEGEIVSATAYAIHRSDDGQ----- 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
               D L + GF++  K   + ++       K   DV + +D  E +  ++ +++ SGDG
Sbjct: 56  LKFQDALRHIGFELKLKPFIQRSDGSA----KGDWDVGITIDVLETAPEVDTVILLSGDG 111

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
            F  L+  +++   K  + + V   PS+ +  L   A  F  +  
Sbjct: 112 DFALLLDKIRQ---KYAVEAEVYGVPSLTAKSLMEAASRFHPIDE 153


>gi|313127027|ref|YP_004037297.1| hypothetical protein Hbor_22910 [Halogeometricum borinquense DSM
           11551]
 gi|312293392|gb|ADQ67852.1| uncharacterized conserved protein [Halogeometricum borinquense DSM
           11551]
          Length = 165

 Score =  143 bits (360), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 44/170 (25%), Positives = 82/170 (48%), Gaps = 14/170 (8%)

Query: 3   DPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            P +++A+  D  NLY S+++    +IDY  LL+   S   + RA  Y      PE++  
Sbjct: 5   HPGQRVAILADAQNLYHSAQSLYSRNIDYSSLLEKGVSDRTLTRAIAYVVRADSPEEES- 63

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
                 D L   GF+   K  K F +       K+  DV +++DA   +  ++ +V+ +G
Sbjct: 64  ----FFDALVEIGFETKIKDIKTFGDGS----KKADWDVGMSLDAVTLANHVDTVVLCTG 115

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
           DG F+ L + L+ +  +V +++         +D+L   AD F+D++  + 
Sbjct: 116 DGDFSRLCSHLRHEGVRVEVIAF----KESTADELIEAADTFLDMSDRQE 161


>gi|218514126|ref|ZP_03510966.1| hypothetical protein Retl8_10672 [Rhizobium etli 8C-3]
          Length = 149

 Score =  142 bits (358), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 80/136 (58%), Positives = 108/136 (79%), Gaps = 2/136 (1%)

Query: 45  RAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAV 104
           RAYYYT ++ D  Q++S + PL+DWL YNG++VV K AKEFT++ GR+++K +MD+ELA+
Sbjct: 1   RAYYYTALIED--QEYSSIRPLIDWLDYNGYKVVTKPAKEFTDSMGRRKIKGNMDIELAI 58

Query: 105 DAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
           DA EQSE ++HLVIFSGDG FT LV ALQR+ +KV+++ST+ + P M +D LRRQAD+F+
Sbjct: 59  DAMEQSETVDHLVIFSGDGDFTNLVEALQRRGRKVSVISTMATQPPMIADDLRRQADHFI 118

Query: 165 DLAYLKNEIARDPDED 180
           DL  LK EI RDP E 
Sbjct: 119 DLLSLKAEIGRDPSER 134


>gi|127512105|ref|YP_001093302.1| hypothetical protein Shew_1173 [Shewanella loihica PV-4]
 gi|126637400|gb|ABO23043.1| protein of unknown function DUF88 [Shewanella loihica PV-4]
          Length = 157

 Score =  142 bits (358), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 39/164 (23%), Positives = 73/164 (44%), Gaps = 13/164 (7%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            ++IALF+D  N+Y + + A G   +Y  + +    +  ++ A  Y    GD  Q     
Sbjct: 1   MKRIALFVDVQNIYYTCRQAYGRQFNYHAMWQRLNEQGEIVTALAYAIDRGDDGQ----- 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
               D L + GF+V  K   + ++       K   DV + +D  E +  ++ +V+ SGDG
Sbjct: 56  IKFQDALKHIGFEVKLKPYIQRSDGSA----KGDWDVGITIDIMEHAPEVDTVVLLSGDG 111

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
            F  L+  +    +K ++ + V   P +++  L   A  F  + 
Sbjct: 112 DFALLLEHI---GRKYSLETEVYGVPELSAKALMDAATQFHPIE 152


>gi|114046654|ref|YP_737204.1| hypothetical protein Shewmr7_1148 [Shewanella sp. MR-7]
 gi|113888096|gb|ABI42147.1| protein of unknown function DUF88 [Shewanella sp. MR-7]
          Length = 157

 Score =  142 bits (358), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 41/163 (25%), Positives = 76/163 (46%), Gaps = 13/163 (7%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            +KIALF+D  N+Y + + A     +YRKL +   ++  ++ A  Y    GD  Q     
Sbjct: 1   MKKIALFVDVQNIYYTCREAYQRQFNYRKLWQQLSTQGEIVSAIAYAIHRGDDGQ----- 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
               D L + GF++  K   + ++       K   DV + +D  E +  ++ +++ SGDG
Sbjct: 56  LKFQDALRHIGFELKLKPFIQRSDGSA----KGDWDVGITIDVLEMAPEVDTVILLSGDG 111

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
            F  L+  +++   K  + + V   PS+ +  L   A  F+ +
Sbjct: 112 DFALLLDKIRQ---KYAVEAEVYGVPSLTAKSLMDAATQFIPI 151


>gi|292655260|ref|YP_003535157.1| hypothetical protein HVO_1102 [Haloferax volcanii DS2]
 gi|291371756|gb|ADE03983.1| Uncharacterized conserved protein [Haloferax volcanii DS2]
          Length = 165

 Score =  142 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 43/170 (25%), Positives = 80/170 (47%), Gaps = 14/170 (8%)

Query: 3   DPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            P +++A+  D  NLY ++++    +IDY  LL+   +   + RA  Y      P++   
Sbjct: 5   HPDQRVAILADAQNLYHTAQSLYSRNIDYSSLLQKGTAGRALTRAIAYVIRADSPDE--- 61

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
                 D L   GF+   K  K F +       K+  D+ +A+DA   ++ ++ +V+ SG
Sbjct: 62  --VSFFDALVDIGFETKIKDIKTFGDGS----KKADWDLGIALDAVSLADHVDTVVLCSG 115

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
           DG F  L   L+ +  +V +++         +++L   AD F+DL+  K 
Sbjct: 116 DGDFERLCTHLRHEGVRVEVMAF----KESTAEELVAAADTFIDLSERKE 161


>gi|146293884|ref|YP_001184308.1| hypothetical protein Sputcn32_2790 [Shewanella putrefaciens CN-32]
 gi|145565574|gb|ABP76509.1| protein of unknown function DUF88 [Shewanella putrefaciens CN-32]
          Length = 157

 Score =  142 bits (357), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 13/165 (7%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            +KIALF+D  N+Y + + A G   +YRKL +       ++ A  Y    GD  Q     
Sbjct: 1   MKKIALFVDVQNIYYTCREAYGRQFNYRKLWQHLGYEGDIVLAVAYAIHKGDDGQ----- 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
               D L + GF+V  K   + ++       K   DV + +D  E +  ++ +++ SGDG
Sbjct: 56  LKFQDALKHIGFEVKLKPFIQRSDGSA----KGDWDVGITIDIMEAASEVDTVILLSGDG 111

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
            F  L   LQ+  +K  + + V   P++ +  LR  A  F  +  
Sbjct: 112 DFDLL---LQKIHQKYGVETQVYGVPTLTAKSLRDAASQFHPIDE 153


>gi|319427256|gb|ADV55330.1| conserved hypothetical protein [Shewanella putrefaciens 200]
          Length = 157

 Score =  141 bits (356), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 13/165 (7%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            +KIALF+D  N+Y + + A G   +YRKL +       ++ A  Y    GD  Q     
Sbjct: 1   MKKIALFVDVQNIYYTCREAYGRQFNYRKLWQHLGYEGDIVLAVAYAIHKGDDGQ----- 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
               D L + GF+V  K   + ++       K   DV + +D  E +  ++ +++ SGDG
Sbjct: 56  LKFQDALKHIGFEVKLKPFIQRSDGSA----KGDWDVGITIDIMEAASEVDTVILLSGDG 111

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
            F  L   LQ+  +K  + + V   P++ +  LR  A  F  +  
Sbjct: 112 DFDLL---LQKIHQKYWVETQVYGVPTLTAKSLRDAASQFHPIDE 153


>gi|37521016|ref|NP_924393.1| hypothetical protein glr1447 [Gloeobacter violaceus PCC 7421]
 gi|35212012|dbj|BAC89388.1| glr1447 [Gloeobacter violaceus PCC 7421]
          Length = 190

 Score =  141 bits (356), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 53/175 (30%), Positives = 90/175 (51%), Gaps = 10/175 (5%)

Query: 3   DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
             ++++++FIDG N++ + ++ G+  D RK+L+ F     ++ A++YT +          
Sbjct: 5   YRQDRVSIFIDGNNMFYAQRSNGWFFDPRKVLEYFNRHEALVNAFWYTGIRDP-----QD 59

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
                D L   GF V  K  KE+ +   G    K+++D+E+ VD F       H V+FSG
Sbjct: 60  QRGFRDALIAMGFTVREKFLKEYYDRLSGEMTQKANLDIEIVVDMFNTVAQYNHAVLFSG 119

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
           DG F   V  L+ K  ++T+VST      M + +LR  AD ++DL  L+  I + 
Sbjct: 120 DGDFERAVELLRSKDTRITVVST----EGMIARELRNAADRYIDLNDLRPFIEKT 170


>gi|119509873|ref|ZP_01629016.1| hypothetical protein N9414_11729 [Nodularia spumigena CCY9414]
 gi|119465482|gb|EAW46376.1| hypothetical protein N9414_11729 [Nodularia spumigena CCY9414]
          Length = 236

 Score =  141 bits (355), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 14/180 (7%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            + R ++A+FIDG +L+ ++  LG +IDY KLL      + ++RA++YT +         
Sbjct: 51  LENRGRVAIFIDGVSLFHTALQLGIEIDYLKLLCHLTGGSRLLRAFFYTAIDTSRPNAAR 110

Query: 62  -----PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHL 116
                     L W+  NG++VV K  +           K +++VE+AVD    +   +  
Sbjct: 111 PRPNEKQQGFLFWMRRNGYRVVTKEVQ-----LADHTKKHNLNVEIAVDMITLAPYYDTA 165

Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
           ++ SGD      V A+     +V +VS      ++ SD L   AD F+DL  +K  I +D
Sbjct: 166 ILVSGDRDLAYAVNAVSATGSRVEVVS----LRALTSDSLIDVADEFIDLDRIKQYIQKD 221


>gi|120598045|ref|YP_962619.1| hypothetical protein Sputw3181_1222 [Shewanella sp. W3-18-1]
 gi|120558138|gb|ABM24065.1| protein of unknown function DUF88 [Shewanella sp. W3-18-1]
          Length = 157

 Score =  140 bits (354), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 13/165 (7%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            +KIALF+D  N+Y + + A G   +YRKL +       ++ A  Y    GD  Q     
Sbjct: 1   MKKIALFVDVQNIYYTCREAYGRQFNYRKLWQHLGYEGDIVLAVAYAIHKGDDGQ----- 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
               D L + GF+V  K   + ++       K   DV + +D  E +  ++ +++ SGDG
Sbjct: 56  LKFQDALKHIGFEVKLKPFIQRSDGSA----KGDWDVGITIDIMEAASEVDTVILLSGDG 111

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
            F  L   LQ+  +K  + + V   P++ +  LR  A  F  +  
Sbjct: 112 DFDLL---LQKIYQKYGVETQVYGVPTLTAKSLRDAASQFHPIDE 153


>gi|117919529|ref|YP_868721.1| hypothetical protein Shewana3_1080 [Shewanella sp. ANA-3]
 gi|117611861|gb|ABK47315.1| protein of unknown function DUF88 [Shewanella sp. ANA-3]
          Length = 170

 Score =  140 bits (353), Expect = 8e-32,   Method: Composition-based stats.
 Identities = 43/167 (25%), Positives = 77/167 (46%), Gaps = 13/167 (7%)

Query: 1   MFDPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
           +  P +KIALF+D  N+Y + + A     +YRKL +   ++  ++ A  Y    GD  Q 
Sbjct: 10  ITYPLKKIALFVDVQNIYYTCREAYQRQFNYRKLWQQLSAQGEIVSAIAYAIHRGDDGQ- 68

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119
                   D L + GF++  K   + ++       K   DV + +D  E +  ++ +++ 
Sbjct: 69  ----LKFQDALRHIGFELKLKPFIQRSDGSA----KGDWDVGITIDVLEMAPEVDTVILL 120

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
           SGDG F  L+  +++   K  I + V   PS+ +  L   A  F  +
Sbjct: 121 SGDGDFALLLDKIRQ---KYAIEAEVYGVPSLTAKSLMDAATRFTPI 164


>gi|22298340|ref|NP_681587.1| hypothetical protein tll0798 [Thermosynechococcus elongatus BP-1]
 gi|22294519|dbj|BAC08349.1| tll0798 [Thermosynechococcus elongatus BP-1]
          Length = 176

 Score =  140 bits (353), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 48/178 (26%), Positives = 92/178 (51%), Gaps = 12/178 (6%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVI--RAYYYTTVVGDPEQ 58
           M   +E++++FIDG N++ + +  G+  D R++L+ F     ++   A++YT +     +
Sbjct: 1   MLPAQERLSIFIDGNNMFYAQQKNGWFFDPRRVLEFFTRDPKIVLVNAFWYTGL-----K 55

Query: 59  QFSPLHPLLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQSEGLEHLV 117
                    D L   G+ V  K+ KE+ +   G+   K+++D+E+ +D F      + +V
Sbjct: 56  DMQDQRSFRDALINLGYTVRTKLLKEYYDESLGKYYQKANLDIEIVIDMFNTVGQYDRVV 115

Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
           +FSGDG F   +  L+ K   +T+VST      M + +LR   D ++DL  ++  I +
Sbjct: 116 LFSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNEIRPFIEK 169


>gi|222479108|ref|YP_002565345.1| protein of unknown function DUF88 [Halorubrum lacusprofundi ATCC
           49239]
 gi|222452010|gb|ACM56275.1| protein of unknown function DUF88 [Halorubrum lacusprofundi ATCC
           49239]
          Length = 165

 Score =  140 bits (352), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 14/170 (8%)

Query: 3   DPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            P +++A+  D  NLY S+++    +IDY  LL+   +   ++RA  Y      PE++  
Sbjct: 5   HPDQRVAVLADSQNLYHSAQSVYSRNIDYSGLLEEAVNDRSLVRAIAYVIRADSPEEES- 63

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
                 + L   GF+   K  K F +       K+  D+ +++DA   +  ++ +VI +G
Sbjct: 64  ----FFEALRDIGFETKIKEIKTFADGS----KKADWDLGMSLDAVSLASHVDTVVICTG 115

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
           DG F  L + L+ +  +V  +       + A+D+L   AD F+DLA  + 
Sbjct: 116 DGDFARLCSHLRHEGVRVEAMGFG----NSAADELIDAADDFVDLAEHEE 161


>gi|126175377|ref|YP_001051526.1| hypothetical protein Sbal_3176 [Shewanella baltica OS155]
 gi|304410207|ref|ZP_07391826.1| hypothetical protein Sbal183DRAFT_1664 [Shewanella baltica OS183]
 gi|307302082|ref|ZP_07581840.1| hypothetical protein Sbal175DRAFT_0340 [Shewanella baltica BA175]
 gi|125998582|gb|ABN62657.1| protein of unknown function DUF88 [Shewanella baltica OS155]
 gi|304351616|gb|EFM16015.1| hypothetical protein Sbal183DRAFT_1664 [Shewanella baltica OS183]
 gi|306914120|gb|EFN44541.1| hypothetical protein Sbal175DRAFT_0340 [Shewanella baltica BA175]
          Length = 157

 Score =  139 bits (351), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 45/165 (27%), Positives = 74/165 (44%), Gaps = 13/165 (7%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            +KIALF+D  N+Y + + A G   +YRKL +       +  A  Y    GD  Q     
Sbjct: 1   MKKIALFVDVQNIYYTCREAYGRQFNYRKLWQHLGYEGDIALAVAYAIHKGDDGQ----- 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
               D L + GF+V  K   + ++       K   DV + +D  E +  ++ +++ SGDG
Sbjct: 56  LKFQDALKHIGFEVKLKPFIQRSDGSA----KGDWDVGITIDIMEAASEVDTVILLSGDG 111

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
            F  L   LQ+  +K  + + V   P++ +  LR  A  F  +  
Sbjct: 112 DFDLL---LQKIHQKYGVETQVYGVPTLTAKSLRDAASQFHPIDE 153


>gi|110597861|ref|ZP_01386144.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031]
 gi|110340586|gb|EAT59069.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031]
          Length = 280

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 50/172 (29%), Positives = 91/172 (52%), Gaps = 9/172 (5%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
             + A+FIDGANL+ + + LG+ ID+ +L+  F +    + A YY        ++ +   
Sbjct: 1   MGRAAVFIDGANLFYTQRHLGWQIDFSRLMAFFMTGYASVEANYYVPASEPVSEENAA-- 58

Query: 65  PLLDWLHYNGFQVVAKVAKEFTE-NCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
                L  +G+++++K  K+      G   +K ++DVEL VDA   SE  +  ++FSGD 
Sbjct: 59  -FTRVLTAHGYRIISKPVKKIVNKETGEVIMKGNLDVELVVDALIGSEHYDTFILFSGDS 117

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD-YFMDLAYLKNEIA 174
            F  L+ AL+ K K+V + ST      +++ +L  + +  + DL+ L++ I 
Sbjct: 118 DFLPLLRALKEKGKEVIVYST----QGLSARELLAEPNVTYFDLSLLRDRIG 165


>gi|269837665|ref|YP_003319893.1| hypothetical protein Sthe_1637 [Sphaerobacter thermophilus DSM
           20745]
 gi|269786928|gb|ACZ39071.1| protein of unknown function DUF88 [Sphaerobacter thermophilus DSM
           20745]
          Length = 201

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 61/169 (36%), Positives = 85/169 (50%), Gaps = 14/169 (8%)

Query: 1   MFDPRE--KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58
           M  P +  K+A+F D +NLY +++ LG  IDY +LL        + RAY Y  V  D   
Sbjct: 1   MCRPDQFDKVAVFFDMSNLYFAARDLGIKIDYTRLLDFIVGGRRLHRAYAYMAVAPDDNT 60

Query: 59  QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVI 118
                 P L WL  NGF+V+ K  + +++       K  +D+ELAVD   Q+  ++  VI
Sbjct: 61  ----AVPFLTWLRRNGFRVITKTLRRYSDGT----SKGDLDMELAVDLLSQAPYIDVAVI 112

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
            SGDG FT LV   QR   +V I ST    P   +  L   AD ++DL 
Sbjct: 113 VSGDGDFTYLVDRAQRLGLRVEIAST----PRYTATDLMEIADRYIDLE 157


>gi|298491324|ref|YP_003721501.1| hypothetical protein Aazo_2466 ['Nostoc azollae' 0708]
 gi|298233242|gb|ADI64378.1| protein of unknown function DUF88 ['Nostoc azollae' 0708]
          Length = 228

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 56/173 (32%), Positives = 88/173 (50%), Gaps = 12/173 (6%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            R ++A+FIDG NL+ ++  LG +IDY KLL      + ++RA++YT V    E+Q    
Sbjct: 53  NRGRVAIFIDGLNLFHAALQLGIEIDYVKLLCRLTQSSRLLRAFFYTGVDASKEKQ---- 108

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
              L W+  NG++VV K      EN      K +++VE+A+D    +   +  V+ SGDG
Sbjct: 109 QGFLLWMRRNGYRVVTKDILAVAENG----KKPNLNVEIAIDMITLAPYYDTAVLVSGDG 164

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
                V A+     +V ++    +     SD L   ADYF+D   +K  I +D
Sbjct: 165 DLAYAVNAVSSLGSRVEVIGLQTT----TSDTLINVADYFIDFDSVKQHIQKD 213


>gi|49081554|gb|AAT50177.1| PA3951 [synthetic construct]
          Length = 168

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 42/173 (24%), Positives = 71/173 (41%), Gaps = 19/173 (10%)

Query: 1   MFDPR----EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGD 55
           M  P     +KIA+F D  NLY + + A G  ++Y  L         ++ AY Y    GD
Sbjct: 1   MSRPESPAAKKIAVFADVQNLYYTVRQAYGCHLNYAALWADIARGGSIVEAYAYAIDRGD 60

Query: 56  PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEH 115
           P             L   GF V  K   +  +       K   DV + +D  + +  ++ 
Sbjct: 61  P-----RQQQFQQILRNLGFTVKLKPYIQRADGSA----KGDWDVGITIDVLDAAPRVDE 111

Query: 116 LVIFSGDGCFTTLVAA-LQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
           +V+ SGDG F  L+   ++       +V+T    P + ++ L R A  ++ + 
Sbjct: 112 VVLLSGDGDFDLLLEKVIRAHG----VVATAYGVPGLTANALIRAASRYVPIE 160


>gi|75908331|ref|YP_322627.1| hypothetical protein Ava_2110 [Anabaena variabilis ATCC 29413]
 gi|75702056|gb|ABA21732.1| Protein of unknown function DUF88 [Anabaena variabilis ATCC 29413]
          Length = 173

 Score =  139 bits (350), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 50/181 (27%), Positives = 95/181 (52%), Gaps = 13/181 (7%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA---IVIRAYYYTTVVGDPE 57
           M  P  ++++F+DG N++ + +  G+  D R++L+ F++      +I A++YT +     
Sbjct: 1   MGSPMNRLSIFVDGNNMFYAQQKNGWFFDPRRVLEYFKNEQSETTLINAFWYTGLKDP-- 58

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHL 116
                     D L   G+ V  K+ KE+  ++ GR   K+++D+E+ VD F   +  + +
Sbjct: 59  ---QDQRGFRDALISLGYTVRTKILKEYYDDSSGRYSQKANLDIEIVVDMFNTVDQYDRV 115

Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
           V+FSGDG F   +  L+ K   +T+VST      M + +LR   D ++DL  +++ I + 
Sbjct: 116 VLFSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDRIEKA 171

Query: 177 P 177
            
Sbjct: 172 E 172


>gi|332306977|ref|YP_004434828.1| hypothetical protein Glaag_2619 [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332174306|gb|AEE23560.1| hypothetical protein Glaag_2619 [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 158

 Score =  138 bits (349), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 40/161 (24%), Positives = 76/161 (47%), Gaps = 13/161 (8%)

Query: 7   KIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
           KIA+F+D  N+Y +++ +     +YRK  +   ++  ++ A  Y T   D +QQ      
Sbjct: 4   KIAVFVDVQNIYYTTRDSYQKQFNYRKFWQHLSAQGDIVIANAYATERHDTQQQK----- 58

Query: 66  LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
               L + GF V  K   + ++       K   DV + +D  + +  ++ +V+ SGDG F
Sbjct: 59  FQSALKHIGFNVKLKPFIQRSDGSA----KGDWDVGITIDVLDAAPHVDTVVLLSGDGDF 114

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
             L+ A + K K   + + V   P++ +  L    D F+++
Sbjct: 115 DLLLKAAKDKYK---VGTKVYGVPALTASSLMNACDEFIEI 152


>gi|260773921|ref|ZP_05882836.1| hypothetical protein VIB_002400 [Vibrio metschnikovii CIP 69.14]
 gi|260610882|gb|EEX36086.1| hypothetical protein VIB_002400 [Vibrio metschnikovii CIP 69.14]
          Length = 157

 Score =  138 bits (349), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 40/164 (24%), Positives = 73/164 (44%), Gaps = 13/164 (7%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            EKIA+ +D  N+Y + +   G   +Y +  +       V +A  Y     +P+Q     
Sbjct: 1   MEKIAILVDVQNVYYTCRERYGRHFNYNQFWQQVTQGRHVFKANAYAIASKEPQQ----- 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
                 L   GF+V+ K   + ++       K   DV +A+DA+E ++ ++ +V+ SGDG
Sbjct: 56  RQFHHILRGVGFEVMLKPFIQRSDGSA----KGDWDVGIALDAYELAQQVDTVVLVSGDG 111

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
            F  LV  +Q+   +  +   V   P + +  L   A  F+ + 
Sbjct: 112 DFEPLVERIQQ---RFQVKVEVYGVPRLTAQSLIDVASQFVPIE 152


>gi|330969505|gb|EGH69571.1| hypothetical protein PSYAR_03309 [Pseudomonas syringae pv. aceris
           str. M302273PT]
          Length = 158

 Score =  138 bits (349), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 39/164 (23%), Positives = 68/164 (41%), Gaps = 13/164 (7%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            +KIA+F D  NLY + + A G   +Y  L      R  ++ A+ Y    GD     S  
Sbjct: 1   MKKIAVFADVQNLYYTVRQAHGCHFNYAALWADISKRGEIVHAFAYAIDRGD-----SKQ 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
                 L   GF V  K   + ++       K   DV + +D  + +  ++ +V+ SGDG
Sbjct: 56  QQFQQILRNLGFTVRLKPYIQRSDGSA----KGDWDVGITIDIMDYAPQVDEIVLASGDG 111

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
            F  L+  +     K  + +     P + ++ L R A  ++ + 
Sbjct: 112 DFDMLLERVIS---KHGVEAVAYGVPGLTANSLIRAASRYVPIE 152


>gi|153001687|ref|YP_001367368.1| hypothetical protein Shew185_3175 [Shewanella baltica OS185]
 gi|160876425|ref|YP_001555741.1| hypothetical protein Sbal195_3319 [Shewanella baltica OS195]
 gi|217972380|ref|YP_002357131.1| hypothetical protein Sbal223_1195 [Shewanella baltica OS223]
 gi|151366305|gb|ABS09305.1| protein of unknown function DUF88 [Shewanella baltica OS185]
 gi|160861947|gb|ABX50481.1| protein of unknown function DUF88 [Shewanella baltica OS195]
 gi|217497515|gb|ACK45708.1| protein of unknown function DUF88 [Shewanella baltica OS223]
 gi|315268615|gb|ADT95468.1| hypothetical protein Sbal678_3326 [Shewanella baltica OS678]
          Length = 157

 Score =  138 bits (349), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 13/164 (7%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            +KIALF+D  N+Y + + A G   +YRKL +       +  A  Y    GD  Q     
Sbjct: 1   MKKIALFVDVQNIYYTCREAYGRQFNYRKLWQHLGYEGDIALAVAYAIHKGDDGQ----- 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
               D L + GF+V  K   + ++       K   DV + +D  E +  ++ +++ SGDG
Sbjct: 56  LKFQDALKHIGFEVKLKPFIQRSDGSA----KGDWDVGITIDIMEAASEVDTVILLSGDG 111

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
            F  L   LQ+  +K  + + V   P++ +  LR  A  F  + 
Sbjct: 112 DFDLL---LQKIHQKYGVETQVYGVPTLTAKSLRDAASQFHPID 152


>gi|28871798|ref|NP_794417.1| hypothetical protein PSPTO_4666 [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|28855050|gb|AAO58112.1| conserved protein of unknown function [Pseudomonas syringae pv.
           tomato str. DC3000]
          Length = 158

 Score =  138 bits (349), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 39/164 (23%), Positives = 68/164 (41%), Gaps = 13/164 (7%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            +KIA+F D  NLY + + A G   +Y  L      R  ++ A+ Y    GD     S  
Sbjct: 1   MKKIAVFADVQNLYYTVRQAYGCHFNYAALWADISKRGEIVHAFAYAIDRGD-----SKQ 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
                 L   GF V  K   + ++       K   DV + +D  + +  ++ +V+ SGDG
Sbjct: 56  QQFQQILRNLGFTVRLKPYIQRSDGSA----KGEWDVGITIDIMDFAPQVDEVVLASGDG 111

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
            F  L+  +     K  + +     P + ++ L R A  ++ + 
Sbjct: 112 DFDMLLDRVIS---KHGVEAVAYGVPGLTANSLIRAASRYVPIE 152


>gi|213966787|ref|ZP_03394938.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
 gi|301383296|ref|ZP_07231714.1| hypothetical protein PsyrptM_11692 [Pseudomonas syringae pv. tomato
           Max13]
 gi|302062465|ref|ZP_07254006.1| hypothetical protein PsyrptK_20968 [Pseudomonas syringae pv. tomato
           K40]
 gi|302133447|ref|ZP_07259437.1| hypothetical protein PsyrptN_18744 [Pseudomonas syringae pv. tomato
           NCPPB 1108]
 gi|213928637|gb|EEB62181.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
 gi|330873520|gb|EGH07669.1| hypothetical protein PSYMP_03990 [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
 gi|330967689|gb|EGH67949.1| hypothetical protein PSYAC_24213 [Pseudomonas syringae pv.
           actinidiae str. M302091]
 gi|331018942|gb|EGH98998.1| hypothetical protein PLA106_23133 [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 158

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 39/164 (23%), Positives = 68/164 (41%), Gaps = 13/164 (7%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            +KIA+F D  NLY + + A G   +Y  L      R  ++ A+ Y    GD     S  
Sbjct: 1   MKKIAVFADVQNLYYTVRQAYGCHFNYAALWADISKRGEIVHAFAYAIDRGD-----SKQ 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
                 L   GF V  K   + ++       K   DV + +D  + +  ++ +V+ SGDG
Sbjct: 56  QQFQQILRNLGFTVRLKPYIQRSDGSA----KGDWDVGITIDIMDFAPQVDEVVLASGDG 111

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
            F  L+  +     K  + +     P + ++ L R A  ++ + 
Sbjct: 112 DFDMLLDRVIS---KHGVEAVAYGVPGLTANSLIRAASRYVPIE 152


>gi|322369896|ref|ZP_08044458.1| hypothetical protein ZOD2009_10415 [Haladaptatus paucihalophilus
           DX253]
 gi|320550232|gb|EFW91884.1| hypothetical protein ZOD2009_10415 [Haladaptatus paucihalophilus
           DX253]
          Length = 165

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 41/167 (24%), Positives = 74/167 (44%), Gaps = 14/167 (8%)

Query: 3   DPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            P +++ +  D  NLY ++++    +IDY  LL        + RA  Y      P++   
Sbjct: 5   HPGQRVTVLADAQNLYHTAQSVYSRNIDYSSLLSKAAQDRELTRAIAYVIQADSPDEDR- 63

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
                 D L   GF+   K  K F +       K+  DV + +DA   +  ++ +V+ +G
Sbjct: 64  ----FFDALTDIGFEAKIKAIKTFGDGS----KKADWDVGICLDAITLAPKVDTVVLCTG 115

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
           DG F  L   L+ +  +V ++    S     +++L   AD F+DL+ 
Sbjct: 116 DGDFAQLATHLRHEGVRVEVMGFQES----TAEELIAAADSFIDLSE 158


>gi|15599146|ref|NP_252640.1| hypothetical protein PA3951 [Pseudomonas aeruginosa PAO1]
 gi|107103468|ref|ZP_01367386.1| hypothetical protein PaerPA_01004538 [Pseudomonas aeruginosa PACS2]
 gi|116051991|ref|YP_789166.1| hypothetical protein PA14_12750 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218889766|ref|YP_002438630.1| hypothetical protein PLES_10241 [Pseudomonas aeruginosa LESB58]
 gi|254242637|ref|ZP_04935959.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|296387523|ref|ZP_06876998.1| hypothetical protein PaerPAb_05192 [Pseudomonas aeruginosa PAb1]
 gi|313109387|ref|ZP_07795349.1| hypothetical protein PA39016_001770011 [Pseudomonas aeruginosa
           39016]
 gi|9950139|gb|AAG07338.1|AE004813_5 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
 gi|115587212|gb|ABJ13227.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126196015|gb|EAZ60078.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|218769989|emb|CAW25751.1| conserved hypothetical protein [Pseudomonas aeruginosa LESB58]
 gi|310881851|gb|EFQ40445.1| hypothetical protein PA39016_001770011 [Pseudomonas aeruginosa
           39016]
          Length = 167

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 42/173 (24%), Positives = 71/173 (41%), Gaps = 19/173 (10%)

Query: 1   MFDPR----EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGD 55
           M  P     +KIA+F D  NLY + + A G  ++Y  L         ++ AY Y    GD
Sbjct: 1   MSRPESPAAKKIAVFADVQNLYYTVRQAYGCHLNYAALWADIARGGSIVEAYAYAIDRGD 60

Query: 56  PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEH 115
           P             L   GF V  K   +  +       K   DV + +D  + +  ++ 
Sbjct: 61  P-----RQQQFQQILRNLGFTVKLKPYIQRADGSA----KGDWDVGITIDVLDAAPRVDE 111

Query: 116 LVIFSGDGCFTTLVAA-LQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
           +V+ SGDG F  L+   ++       +V+T    P + ++ L R A  ++ + 
Sbjct: 112 VVLLSGDGDFDLLLEKVIRAHG----VVATAYGVPGLTANALIRAASRYVPIE 160


>gi|282901769|ref|ZP_06309684.1| protein of unknown function DUF88 [Cylindrospermopsis raciborskii
           CS-505]
 gi|281193386|gb|EFA68368.1| protein of unknown function DUF88 [Cylindrospermopsis raciborskii
           CS-505]
          Length = 173

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 50/182 (27%), Positives = 96/182 (52%), Gaps = 13/182 (7%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA---IVIRAYYYTTVVGDPE 57
           M  P  ++++F+DG N++ + +  G+  D R++L+ F++      +I A++YT +     
Sbjct: 1   MVLPMSRLSIFVDGNNMFYAQQKNGWFFDPRRVLEYFKNEQPETTLINAFWYTGLKDP-- 58

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHL 116
                     D L   G+ V  K+ KE+ ++  GR   K+++D+E+ VD F   +  + +
Sbjct: 59  ---QDQRGFRDALISLGYTVRTKILKEYYDDVSGRYSQKANLDIEIVVDMFNTVDQYDRV 115

Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
           V+FSGDG F   +  L+ K   +T+VST      M + +LR   D ++DL  ++++I + 
Sbjct: 116 VLFSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDQIEKT 171

Query: 177 PD 178
             
Sbjct: 172 EA 173


>gi|229592764|ref|YP_002874883.1| hypothetical protein PFLU5385 [Pseudomonas fluorescens SBW25]
 gi|229364630|emb|CAY52542.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
          Length = 158

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 41/164 (25%), Positives = 70/164 (42%), Gaps = 13/164 (7%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            +KIA+F D  NLY + + A G   +Y  L     SR  ++ AY Y    GD     S  
Sbjct: 1   MKKIAVFADVQNLYYTVRQAYGCHFNYAALWADISSRGQIVEAYAYAIDRGD-----SKQ 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
                 L   GF V  K   + ++       K   DV + +D  + ++ ++ +V+ SGDG
Sbjct: 56  QQFQQILRNLGFTVKLKPYIQRSDGSA----KGDWDVGITIDIMDAADHVDEIVLASGDG 111

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
            F  L+  +     K  + +     P + ++ L R A  ++ + 
Sbjct: 112 DFDMLLDRIIN---KHGVEAVAYGVPGLTANSLIRAASRYVPIE 152


>gi|282896757|ref|ZP_06304763.1| Protein of unknown function DUF88 [Raphidiopsis brookii D9]
 gi|281198166|gb|EFA73056.1| Protein of unknown function DUF88 [Raphidiopsis brookii D9]
          Length = 173

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 51/182 (28%), Positives = 96/182 (52%), Gaps = 13/182 (7%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA---IVIRAYYYTTVVGDPE 57
           M  P  ++++F+DG N++ + +  G+  D R++L+ F++      +I A++YT +     
Sbjct: 1   MVLPMSRLSIFVDGNNMFYAQQKNGWFFDPRRVLEYFKNEQPETTLINAFWYTGLKDP-- 58

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHL 116
                     D L   G+ V  K+ KE+ ++  GR   K+++D+E+ VD F   +  + +
Sbjct: 59  ---QDQRGFRDALISLGYTVRTKILKEYYDDVSGRYSQKANLDIEIVVDMFNTVDQYDRV 115

Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
           V+FSGDG F   +  L+ K   +T+VST      M + +LR   D ++DL  +K++I + 
Sbjct: 116 VLFSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIKDQIEKT 171

Query: 177 PD 178
             
Sbjct: 172 EA 173


>gi|71736408|ref|YP_276474.1| hypothetical protein PSPPH_4358 [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|257482175|ref|ZP_05636216.1| hypothetical protein PsyrptA_02837 [Pseudomonas syringae pv. tabaci
           ATCC 11528]
 gi|289675840|ref|ZP_06496730.1| hypothetical protein PsyrpsF_21381 [Pseudomonas syringae pv.
           syringae FF5]
 gi|298488862|ref|ZP_07006887.1| hypothetical protein PSA3335_4345 [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|71556961|gb|AAZ36172.1| uncharacterized conserved protein [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|298156615|gb|EFH97710.1| hypothetical protein PSA3335_4345 [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|320322652|gb|EFW78745.1| hypothetical protein PsgB076_22027 [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|320330563|gb|EFW86542.1| hypothetical protein PsgRace4_08595 [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330873569|gb|EGH07718.1| hypothetical protein Pgy4_04537 [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330888791|gb|EGH21452.1| hypothetical protein PSYMO_08069 [Pseudomonas syringae pv. mori
           str. 301020]
 gi|330987664|gb|EGH85767.1| hypothetical protein PLA107_21753 [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|331011359|gb|EGH91415.1| hypothetical protein PSYTB_17135 [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 158

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 39/164 (23%), Positives = 68/164 (41%), Gaps = 13/164 (7%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            +KIA+F D  NLY + + A G   +Y  L      R  ++ A+ Y    GD     S  
Sbjct: 1   MKKIAVFADVQNLYYTVRQAHGCHFNYAALWADISKRGEIVHAFAYAIDRGD-----SKQ 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
                 L   GF V  K   + ++       K   DV + +D  + +  ++ +V+ SGDG
Sbjct: 56  QQFQQILRNLGFTVRLKPYIQRSDGSA----KGDWDVGITIDIMDFAPQVDEVVLASGDG 111

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
            F  L+  +     K  + +     P + ++ L R A  ++ + 
Sbjct: 112 DFDMLLERVIS---KHGVEAVAYGVPGLTANSLIRAASRYVPIE 152


>gi|330895533|gb|EGH27843.1| hypothetical protein PSYJA_01969 [Pseudomonas syringae pv. japonica
           str. M301072PT]
 gi|330938177|gb|EGH41874.1| hypothetical protein PSYPI_05358 [Pseudomonas syringae pv. pisi
           str. 1704B]
 gi|330961649|gb|EGH61909.1| hypothetical protein PMA4326_24166 [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 158

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 39/164 (23%), Positives = 68/164 (41%), Gaps = 13/164 (7%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            +KIA+F D  NLY + + A G   +Y  L      R  ++ A+ Y    GD     S  
Sbjct: 1   MKKIAVFADVQNLYYTVRQAHGCHFNYAALWADISKRGEIVHAFAYAIDRGD-----SKQ 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
                 L   GF V  K   + ++       K   DV + +D  + +  ++ +V+ SGDG
Sbjct: 56  QQFQQILRNLGFTVRLKPYIQRSDGSA----KGDWDVGITIDIMDFAPQVDEIVLASGDG 111

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
            F  L+  +     K  + +     P + ++ L R A  ++ + 
Sbjct: 112 DFDMLLERVIS---KHGVEAVAYGVPGLTANSLIRAASRYVPIE 152


>gi|70732718|ref|YP_262481.1| hypothetical protein PFL_5413 [Pseudomonas fluorescens Pf-5]
 gi|68347017|gb|AAY94623.1| conserved hypothetical protein [Pseudomonas fluorescens Pf-5]
          Length = 159

 Score =  138 bits (348), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 39/164 (23%), Positives = 68/164 (41%), Gaps = 13/164 (7%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            +KIA+F D  NLY + + A G   +Y  L      +  ++ AY Y    GD     S  
Sbjct: 1   MKKIAVFADVQNLYYTVRQAYGCHFNYAALWADISKQGQIVEAYAYAIDRGD-----SKQ 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
                 L   GF V  K   + ++       K   DV + +D  + +  ++ +V+ SGDG
Sbjct: 56  QQFQQILRNLGFTVKLKPYIQRSDGSA----KGDWDVGITIDIMDAAAHVDEVVLASGDG 111

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
            F  L+  +     K  + +     P + ++ L R A  ++ + 
Sbjct: 112 DFDLLLERIIH---KHGVSAVAYGVPGLTANSLIRAATRYVPIE 152


>gi|254413060|ref|ZP_05026832.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
           7420]
 gi|196180224|gb|EDX75216.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
           7420]
          Length = 172

 Score =  138 bits (347), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 49/181 (27%), Positives = 93/181 (51%), Gaps = 12/181 (6%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVI--RAYYYTTVVGDPEQ 58
           M     +I++F+DG N++ + +  G+  D +++L+ FR    ++   A++YT +      
Sbjct: 1   MPCSMNRISIFVDGNNMFYAQQKNGWFFDPKRVLEYFRKEPHIVLVNAFWYTGLKDP--- 57

Query: 59  QFSPLHPLLDWLHYNGFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHLV 117
                    D L   G+ V  K+ KE+  ++ GR   K+++D+E+ VD F   E  + ++
Sbjct: 58  --QDQRGFRDALISLGYTVRTKILKEYYDDSSGRYSQKANLDIEIVVDMFNTVEQYDRVI 115

Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
           +FSGDG F   +  L+ K   +T+VST      M + +LR   D ++DL  +++ I +  
Sbjct: 116 LFSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDYIEKTD 171

Query: 178 D 178
            
Sbjct: 172 S 172


>gi|282899662|ref|ZP_06307626.1| protein of unknown function DUF88 [Cylindrospermopsis raciborskii
           CS-505]
 gi|281195541|gb|EFA70474.1| protein of unknown function DUF88 [Cylindrospermopsis raciborskii
           CS-505]
          Length = 230

 Score =  138 bits (347), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 59/178 (33%), Positives = 92/178 (51%), Gaps = 14/178 (7%)

Query: 1   MFD--PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58
           M D   R ++A+FIDG NL+ ++  +G +IDY KLL      + ++RA++YT V    E+
Sbjct: 50  MSDDLNRGRVAIFIDGLNLFHAALQIGIEIDYVKLLCRLTQTSRLLRAFFYTGVDTSKEK 109

Query: 59  QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVI 118
           Q       L W+  NG++VV K     TE+      K +++VE+AVD    +   +  V+
Sbjct: 110 Q----QGFLLWMRRNGYRVVTKDIIALTESG----KKPNLNVEIAVDMITLAPYYDTAVL 161

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
            SGDG     V A+     +V ++       +M SD L   ADYF+D   +K  I +D
Sbjct: 162 VSGDGDLAYAVNAVTSLGSRVEVI----GLQTMTSDSLIDVADYFIDFDSIKQYIQKD 215


>gi|240139942|ref|YP_002964419.1| hypothetical protein MexAM1_META1p3405 [Methylobacterium extorquens
           AM1]
 gi|240009916|gb|ACS41142.1| Conserved hypothetical protein (DUF88) [Methylobacterium extorquens
           AM1]
          Length = 168

 Score =  138 bits (347), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 64/124 (51%), Positives = 97/124 (78%)

Query: 57  EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHL 116
           +Q++S + PL+DWL YNG++VV K  KEFT++ GR+++K +MD+ELA+DA E +  ++H+
Sbjct: 4   DQEYSSIRPLIDWLDYNGYRVVTKPVKEFTDSAGRRKIKGNMDIELAIDALELAPHIDHM 63

Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
           V+FSGDG F +LV A+QR+  +V++VST+ + P+M +D LRRQAD F+DLA+L + I RD
Sbjct: 64  VLFSGDGDFRSLVEAIQRRGVRVSVVSTIQTQPAMIADDLRRQADEFIDLAHLASRIGRD 123

Query: 177 PDED 180
           P E 
Sbjct: 124 PSER 127


>gi|327482342|gb|AEA85652.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166]
          Length = 158

 Score =  138 bits (347), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 42/164 (25%), Positives = 68/164 (41%), Gaps = 14/164 (8%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            +KIALF D  NLY + + A G   DY  L      R  ++ AY Y    GDP       
Sbjct: 1   MKKIALFADVQNLYYTVRQAHGCHFDYSALWADVSRRGSIVEAYAYAIERGDP-----RQ 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
                 L   GF V  K   + ++       K   DV + +D  + +  ++ +V+ SGDG
Sbjct: 56  QQFQQILRKLGFTVKLKPYIQRSDGSA----KGDWDVGITIDVLDAAARVDEVVLASGDG 111

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
            F  L+  ++       + +T    P + +  L R A  ++ + 
Sbjct: 112 DFDLLLERVRAAG----VEATAYGVPGLTAQSLIRAATRYVPIE 151


>gi|66047528|ref|YP_237369.1| hypothetical protein Psyr_4301 [Pseudomonas syringae pv. syringae
           B728a]
 gi|302184786|ref|ZP_07261459.1| hypothetical protein Psyrps6_00540 [Pseudomonas syringae pv.
           syringae 642]
 gi|63258235|gb|AAY39331.1| Protein of unknown function DUF88 [Pseudomonas syringae pv.
           syringae B728a]
          Length = 158

 Score =  138 bits (347), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 39/164 (23%), Positives = 68/164 (41%), Gaps = 13/164 (7%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            +KIA+F D  NLY + + A G   +Y  L      R  ++ A+ Y    GD     S  
Sbjct: 1   MKKIAVFADVQNLYYTVRQAHGCHFNYAALWADISKRGEIVHAFAYAIDRGD-----SKQ 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
                 L   GF V  K   + ++       K   DV + +D  + +  ++ +V+ SGDG
Sbjct: 56  QQFQQILRNLGFTVRLKPYIQRSDGSA----KGDWDVGITIDIMDFAPQVDEIVLASGDG 111

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
            F  L+  +     K  + +     P + ++ L R A  ++ + 
Sbjct: 112 DFDMLLERVIS---KHGVEAVAYGVPGLTANSLIRAASRYVPIE 152


>gi|77461146|ref|YP_350653.1| hypothetical protein Pfl01_4925 [Pseudomonas fluorescens Pf0-1]
 gi|77385149|gb|ABA76662.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
          Length = 159

 Score =  138 bits (347), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 39/164 (23%), Positives = 68/164 (41%), Gaps = 13/164 (7%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            +KIA+F D  NLY + + A G   +Y  L         ++ AY Y    GD     S  
Sbjct: 1   MKKIAVFADVQNLYYTVRQAYGCHFNYAALWADVSQHGQIVEAYAYAIDRGD-----SKQ 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
                 L   GF V  K   + ++       K   DV + +D  + ++ ++ +V+ SGDG
Sbjct: 56  QQFQQILRNLGFTVKLKPYIQRSDGSA----KGDWDVGITLDIMDAADHVDEIVLASGDG 111

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
            F  L+  +     K  + +     P + ++ L R A  ++ + 
Sbjct: 112 DFDMLLERIIN---KHGVQAVAYGVPGLTANSLIRAASRYVPIE 152


>gi|237801480|ref|ZP_04589941.1| hypothetical protein POR16_21831 [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331024339|gb|EGI04396.1| hypothetical protein POR16_21831 [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 158

 Score =  137 bits (346), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 39/164 (23%), Positives = 68/164 (41%), Gaps = 13/164 (7%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            +KIA+F D  NLY + + A G   +Y  L      R  ++ A+ Y    GD     S  
Sbjct: 1   MKKIAVFADVQNLYYTVRQAHGCHFNYAALWADISKRGEIVHAFAYAIDRGD-----SKQ 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
                 L   GF V  K   + ++       K   DV + +D  + +  ++ +V+ SGDG
Sbjct: 56  QQFQQILRNLGFTVRLKPYIQRSDGSA----KGDWDVGITIDIMDFAPQVDEVVLASGDG 111

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
            F  L+  +     K  + +     P + ++ L R A  ++ + 
Sbjct: 112 DFDMLLDRVIS---KHGVAAVAYGVPGLTANSLIRAASRYVPIE 152


>gi|56752213|ref|YP_172914.1| hypothetical protein syc2204_c [Synechococcus elongatus PCC 6301]
 gi|81300700|ref|YP_400908.1| hypothetical protein Synpcc7942_1891 [Synechococcus elongatus PCC
           7942]
 gi|56687172|dbj|BAD80394.1| hypothetical protein [Synechococcus elongatus PCC 6301]
 gi|81169581|gb|ABB57921.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942]
 gi|121309776|dbj|BAF44194.1| LabA [Synechococcus elongatus PCC 7942]
          Length = 186

 Score =  137 bits (346), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 51/185 (27%), Positives = 92/185 (49%), Gaps = 13/185 (7%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIV--IRAYYYTTVVGDPEQ 58
           M     ++A+FIDG N++ + +  G+  D R++L  F +R  +  + AY+YT +      
Sbjct: 1   MAFRPSRLAIFIDGNNMFYAQQKNGWFFDPRRVLNYFANRPEIELVNAYWYTGLKDP--- 57

Query: 59  QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCG--RKRVKSSMDVELAVDAFEQSEGLEHL 116
                    D L   G+ V  K+ KEF +     R   ++++D+E+ +D F   E  + +
Sbjct: 58  --QDQRGFRDALVSLGYTVRTKMLKEFHDESNGNRYFQRANLDIEIVIDMFNTVEQYDEI 115

Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
           V+FSGDG F   +  L+ K   +T+VST      M + +LR   D ++DL  +++ I + 
Sbjct: 116 VLFSGDGDFERAIELLRAKQTHITVVSTD----GMIARELRNATDRYIDLNDIRSFIEKT 171

Query: 177 PDEDK 181
              + 
Sbjct: 172 ERPEP 176


>gi|92112887|ref|YP_572815.1| hypothetical protein Csal_0758 [Chromohalobacter salexigens DSM
           3043]
 gi|91795977|gb|ABE58116.1| protein of unknown function DUF88 [Chromohalobacter salexigens DSM
           3043]
          Length = 158

 Score =  137 bits (346), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 39/165 (23%), Positives = 69/165 (41%), Gaps = 15/165 (9%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
             ++A+F+D  N+Y + + A G   DYR+      +   V+    Y T  GD     +  
Sbjct: 1   MTRVAIFVDTQNVYYTVREAYGKHFDYRRFWARATANREVLTVRCYATDKGD-----AKQ 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
               + L   GF+V  K   +  +       K   DV + +DA E +   + +V+ SGDG
Sbjct: 56  REFQNILRSIGFEVRLKPFIQRADGSA----KGDWDVGITLDAIEYAAQADVVVLVSGDG 111

Query: 124 CFTTLVAALQR-KVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
            F  L   ++    K+V +       P + ++ L   A  F+ + 
Sbjct: 112 DFDLLAEKIREVHGKRVEV----YGVPKLTANSLINAASQFIPIE 152


>gi|109898030|ref|YP_661285.1| hypothetical protein Patl_1710 [Pseudoalteromonas atlantica T6c]
 gi|109700311|gb|ABG40231.1| protein of unknown function DUF88 [Pseudoalteromonas atlantica T6c]
          Length = 158

 Score =  137 bits (346), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 37/161 (22%), Positives = 75/161 (46%), Gaps = 13/161 (8%)

Query: 7   KIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
           +IA+F+D  N+Y +++       +YR+  +    +  ++ A  Y T   D     S    
Sbjct: 4   RIAVFVDVQNIYYTTRDTYQKQFNYRQFWQHLSEQGDIVIANAYATERHD-----SQQQK 58

Query: 66  LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
               L + GF V  K   + ++       K   DV + +D  + ++ ++ +V+ SGDG F
Sbjct: 59  FQSALKHIGFNVKLKPFIQRSDGSA----KGDWDVGITIDVLDAAQQVDTVVLLSGDGDF 114

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
             L+ A++   KK  + + V   P++ ++ L    D F+++
Sbjct: 115 DLLLKAVK---KKHEVKTKVYGVPALTANALVSACDEFVEI 152


>gi|330976912|gb|EGH76935.1| hypothetical protein PSYAP_09660 [Pseudomonas syringae pv. aptata
           str. DSM 50252]
          Length = 158

 Score =  137 bits (346), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 40/164 (24%), Positives = 69/164 (42%), Gaps = 13/164 (7%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            +KIA+F D  NLY + + A G   +Y  L    R R  ++ A+ Y    GD     S  
Sbjct: 1   MKKIAVFADVQNLYYTVRQAHGCHFNYAALWADIRKRGEIVHAFAYAIDRGD-----SKQ 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
                 L   GF V  K   + ++       K   DV + +D  + +  ++ +V+ SGDG
Sbjct: 56  QQFQQILRNLGFTVRLKPYIQRSDGSA----KGDWDVGITIDIMDFAPQVDEIVLASGDG 111

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
            F  L+  +     K  + +     P + ++ L R A  ++ + 
Sbjct: 112 DFDMLLERVIS---KHGVEAVAYGVPGLTANSLIRAASRYVPIE 152


>gi|262404166|ref|ZP_06080721.1| hypothetical protein VOA_002156 [Vibrio sp. RC586]
 gi|262349198|gb|EEY98336.1| hypothetical protein VOA_002156 [Vibrio sp. RC586]
          Length = 157

 Score =  137 bits (345), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 13/165 (7%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            EKIA+ +D  N+Y + +   G   DY +          V++A  Y     DP+Q     
Sbjct: 1   MEKIAILVDVQNVYYTCRERYGRHFDYNQFWSQATQGRAVVKANAYAIASKDPQQ----- 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
                 L   GF+V+ K   + ++       K   DV +A+D +E ++ ++ +V+ SGDG
Sbjct: 56  RQFHHILRGIGFEVMLKPFIQRSDGSA----KGDWDVGIALDGYELAQEVDTVVLVSGDG 111

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
            F  LV  +Q+   +  +   V   P + +  L   A+ F  + +
Sbjct: 112 DFEPLVTRIQQ---RFQVKVEVYGVPKLTAQNLIDVANQFHPIEH 153


>gi|153214272|ref|ZP_01949289.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|229515202|ref|ZP_04404662.1| hypothetical protein VCB_002859 [Vibrio cholerae TMA 21]
 gi|297579334|ref|ZP_06941262.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|124115420|gb|EAY34240.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|229347907|gb|EEO12866.1| hypothetical protein VCB_002859 [Vibrio cholerae TMA 21]
 gi|297536928|gb|EFH75761.1| conserved hypothetical protein [Vibrio cholerae RC385]
          Length = 157

 Score =  137 bits (344), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 15/166 (9%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            EKIA+ +D  N+Y + +   G   DY +          V++A  Y     DP+Q     
Sbjct: 1   MEKIAILVDVQNVYYTCREQYGRHFDYNQFWSQVTQNRTVVKANAYAIASKDPQQ----- 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
                 L   GF+V+ K   + ++       K   DV +A+D +E ++ ++ +V+ SGDG
Sbjct: 56  RQFHHILRGIGFEVMLKPFIQRSDGSA----KGDWDVGIALDGYELAQEVDTVVLVSGDG 111

Query: 124 CFTTLVAAL-QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
            F  LV  + QR   KV +       P + +  L   A  F  + +
Sbjct: 112 DFEPLVTRIAQRFQVKVEV----YGVPKLTAQHLIDVASQFHPIEH 153


>gi|330811889|ref|YP_004356351.1| hypothetical protein PSEBR_a4925 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327379997|gb|AEA71347.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 159

 Score =  137 bits (344), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 39/165 (23%), Positives = 70/165 (42%), Gaps = 15/165 (9%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            +KIA+F D  NLY + + A G   +Y  L      +  ++ AY Y    GD     S  
Sbjct: 1   MKKIAVFADVQNLYYTVRQAYGCHFNYAALWADVSKQGQIVEAYAYAIDRGD-----SKQ 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
                 L   GF V  K   + ++       K   DV + +D  + ++ ++ +V+ SGDG
Sbjct: 56  QQFQQILRNLGFIVKLKPYIQRSDGSA----KGDWDVGITLDIMDAADHVDEVVLASGDG 111

Query: 124 CFTTLVAA-LQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
            F  L+   +Q+   +    +     P + ++ L R A  ++ + 
Sbjct: 112 DFDMLLERIIQKHGVQ----AVAYGVPGLTANSLIRAASRYVPIE 152


>gi|262274163|ref|ZP_06051975.1| hypothetical protein VHA_001139 [Grimontia hollisae CIP 101886]
 gi|262221973|gb|EEY73286.1| hypothetical protein VHA_001139 [Grimontia hollisae CIP 101886]
          Length = 161

 Score =  137 bits (344), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 15/170 (8%)

Query: 1   MFDPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
           M    +KIA+F D  N+Y +++ A G   +YRKL +  +    V+ A  Y     D +Q 
Sbjct: 1   MGFSLKKIAVFADVQNVYYTTRQAYGRQFNYRKLWQRLQEMGDVVCANAYAIRRDDDQQ- 59

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119
                   D L + GF+V  K   + ++       K   DV +A+D  E +  ++ +V+ 
Sbjct: 60  ----IKFQDALRHIGFEVKLKPYIQRSDGS----TKGDWDVGIAIDVMEMAPEVDTVVLL 111

Query: 120 SGDGCFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
           SGDG F  L+  ++ +  K+  +       P + ++ L    D F+ +  
Sbjct: 112 SGDGDFDLLMNKVRERYGKEAIVF----GVPMLTANSLINSVDRFIGIED 157


>gi|225851407|ref|YP_002731641.1| hypothetical protein PERMA_1879 [Persephonella marina EX-H1]
 gi|225645689|gb|ACO03875.1| conserved hypothetical protein [Persephonella marina EX-H1]
          Length = 224

 Score =  137 bits (344), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 48/192 (25%), Positives = 86/192 (44%), Gaps = 24/192 (12%)

Query: 3   DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTT-----VVGDPE 57
            P EK+A+FIDG N++ +   +   I+Y+KL+   R    ++RAY+YT      +  D  
Sbjct: 18  YPNEKVAIFIDGGNMFHACNYMQIKINYKKLIDILRKDRWLLRAYFYTGIPSGDLPRDVR 77

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEH 115
           +Q       L+ L   G +V     K+  E      ++  +D+ LA D    +     + 
Sbjct: 78  EQLRKQQGFLNELQNLGIKVKTMPLKKTPEG----YIEKGIDILLATDMVSLAFRNAYDT 133

Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK----- 170
            ++ SGD  +  +V  +Q   K+V   S   +    +S +LR+  D F+ L  +K     
Sbjct: 134 AILVSGDSDYVPVVKEIQELGKRVENASFKRT----SSYELRKVCDEFILLDNIKHRFTT 189

Query: 171 ----NEIARDPD 178
                +I + P+
Sbjct: 190 PLYPEKIEKPPE 201


>gi|153800465|ref|ZP_01955051.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|124124091|gb|EAY42834.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
          Length = 157

 Score =  137 bits (344), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 15/166 (9%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            EKIA+ +D  N+Y + +   G   DY +          V++A  Y     DP+Q     
Sbjct: 1   MEKIAILVDVQNVYYTCREQYGRHFDYNQFWSQVTQNRTVVKANAYAIASKDPQQ----- 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
                 L   GF+V+ K   + ++       K   DV +A+D +E ++ ++ +V+ SGDG
Sbjct: 56  RQFHHILRGIGFEVMLKPFIQRSDGSA----KGDWDVGIALDGYELAQEVDTVVLVSGDG 111

Query: 124 CFTTLVAAL-QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
            F  LV  + QR   KV +       P + +  L   A  F  + +
Sbjct: 112 DFEPLVTRIAQRFQVKVEV----YGVPKLTAQHLIDVASQFHPIEH 153


>gi|218440568|ref|YP_002378897.1| hypothetical protein PCC7424_3645 [Cyanothece sp. PCC 7424]
 gi|218173296|gb|ACK72029.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7424]
          Length = 180

 Score =  137 bits (344), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 49/179 (27%), Positives = 96/179 (53%), Gaps = 12/179 (6%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA--IVIRAYYYTTVVGDPEQQ 59
             P++++++F+DG N++ + +  G+  D R++L+ F +     +I A++YT +     + 
Sbjct: 10  LYPKDRLSIFVDGNNMFYAQQKNGWFFDPRRVLEYFTNDPTVNLINAFWYTGL-----KD 64

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVI 118
                   D L   G+ V  K+ KE+  ++ GR   K+++D+E+ VD F   +  + +++
Sbjct: 65  SQDQRGFRDALISLGYTVRTKILKEYYDDSSGRYSQKANLDIEIVVDMFNTVDQYDRVIL 124

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
           FSGDG F   +  L+ K   +T+VST      M + +LR   D ++DL  ++N I +  
Sbjct: 125 FSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRNFIEKTD 179


>gi|152985348|ref|YP_001346543.1| hypothetical protein PSPA7_1157 [Pseudomonas aeruginosa PA7]
 gi|150960506|gb|ABR82531.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
          Length = 167

 Score =  137 bits (344), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 41/173 (23%), Positives = 71/173 (41%), Gaps = 19/173 (10%)

Query: 1   MFDPR----EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGD 55
           M  P     +KIA+F D  NLY + + A G  ++Y  L      R  ++ AY Y    GD
Sbjct: 1   MSHPESPAAKKIAVFADVQNLYYTVRQAYGCHLNYAALWADIARRGRIVEAYAYAIDRGD 60

Query: 56  PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEH 115
           P             L   GF V  K   +  +       K   DV + +D  + +  ++ 
Sbjct: 61  P-----RQQQFQRILRNLGFTVKLKPYIQRADGSA----KGDWDVGITIDVLDAAPRVDE 111

Query: 116 LVIFSGDGCFTTLVAA-LQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
           +V+ SGDG F  L+   ++       + ++    P + ++ L R A  ++ + 
Sbjct: 112 VVLLSGDGDFDLLLEKVIRAHG----VEASAYGVPGLTANALIRAASRYVPIE 160


>gi|289627587|ref|ZP_06460541.1| hypothetical protein PsyrpaN_21062 [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|289649838|ref|ZP_06481181.1| hypothetical protein Psyrpa2_19118 [Pseudomonas syringae pv.
           aesculi str. 2250]
 gi|330870428|gb|EGH05137.1| hypothetical protein PSYAE_24882 [Pseudomonas syringae pv. aesculi
           str. 0893_23]
          Length = 158

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 39/164 (23%), Positives = 68/164 (41%), Gaps = 13/164 (7%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            +KIA+F D  NLY + + A G   +Y  L      R  ++ A+ Y    GD     S  
Sbjct: 1   MKKIAVFADVQNLYYTVRQAHGCHFNYAALWADISKRGEIVHAFAYAIDRGD-----SKQ 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
                 L   GF V  K   + ++       K   DV + +D  + +  ++ +V+ SGDG
Sbjct: 56  QQFQQILRNLGFTVRLKPYIQRSDGSA----KGDWDVGITIDIMDFAPQVDEVVLASGDG 111

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
            F  L+  +     K  + +     P + ++ L R A  ++ + 
Sbjct: 112 DFDMLLERVIS---KHDVEAVAYGVPGLTANSLIRAASRYVPIE 152


>gi|119946864|ref|YP_944544.1| hypothetical protein Ping_3258 [Psychromonas ingrahamii 37]
 gi|119865468|gb|ABM04945.1| hypothetical protein DUF88 [Psychromonas ingrahamii 37]
          Length = 157

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 39/164 (23%), Positives = 72/164 (43%), Gaps = 13/164 (7%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
             KIA+F D  N+Y +++ A G   +YRKL +    +  ++ AY Y    GD +Q     
Sbjct: 1   MNKIAVFADVQNIYYTTRQAYGKQFNYRKLWQQLEQQGDIVSAYAYAIERGDNQQ----- 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
               D L + GF+V  K   + ++       K   DV + +D  E +  ++ +++ SGDG
Sbjct: 56  KKFQDVLTHLGFEVKLKPFIQRSDGTA----KGDWDVGITIDIMETAPQVDTIILLSGDG 111

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
            F  L   +++      + +     P + +  L   +  F  + 
Sbjct: 112 DFAILFDKVKQA---YGVKTEAYGVPKLTAKALIDASTVFHPIE 152


>gi|157960982|ref|YP_001501016.1| hypothetical protein Spea_1154 [Shewanella pealeana ATCC 700345]
 gi|157845982|gb|ABV86481.1| protein of unknown function DUF88 [Shewanella pealeana ATCC 700345]
          Length = 157

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 13/164 (7%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            ++IALF+D  N+Y + + A G   +YRKL +       V +A  Y    GD  Q     
Sbjct: 1   MKRIALFVDVQNIYYTCRQAYGKQFNYRKLWQHLGYEGDVSQATAYAIHRGDDGQ----- 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
               D L + GF+V  K   + ++       K   DV + +D  E +  ++ +++ SGDG
Sbjct: 56  LKFQDALKHIGFEVKLKPFIQRSDGSA----KGDWDVGITIDIMEAASEVDCVILLSGDG 111

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
            F  L+  + +   K  + + V   P++ +  L    + F ++ 
Sbjct: 112 DFDLLMQRIHQ---KYGVETQVYGVPTLTAKSLIDSVNQFHEID 152


>gi|110834666|ref|YP_693525.1| hypothetical protein ABO_1805 [Alcanivorax borkumensis SK2]
 gi|110647777|emb|CAL17253.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
          Length = 160

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 40/165 (24%), Positives = 69/165 (41%), Gaps = 13/165 (7%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
             +IA+F D  N+Y +++ A G   +YR L +   ++  ++ A  Y T  GD  Q     
Sbjct: 3   MPRIAVFADVQNIYYTTRQAFGRPFNYRALWQLLSAQGEIVHALAYATHRGDDGQ----- 57

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
               D L + GF V  K   + ++       K   DV +AVD    +  ++ +V+ SGDG
Sbjct: 58  TKFQDALKHIGFTVKLKPYIQRSDGS----SKGDWDVGIAVDVMTLAPEVDTVVLLSGDG 113

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
            F  L+  +        + + V     + +  L   A  F  +  
Sbjct: 114 DFDVLLTRV---GANPGVRTEVYGVEPLTARSLIDSASVFHPIGD 155


>gi|194335638|ref|YP_002017432.1| protein of unknown function DUF88 [Pelodictyon phaeoclathratiforme
           BU-1]
 gi|194308115|gb|ACF42815.1| protein of unknown function DUF88 [Pelodictyon phaeoclathratiforme
           BU-1]
          Length = 287

 Score =  136 bits (343), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 51/173 (29%), Positives = 89/173 (51%), Gaps = 9/173 (5%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
             + A+FIDGANL+ + + LG+ ID+ +L+  F S    + A YY        ++ +   
Sbjct: 8   MGRAAVFIDGANLFYTQRHLGWQIDFSRLMAFFISGYATVEANYYVPASEPVSEENAA-- 65

Query: 65  PLLDWLHYNGFQVVAKVAKEFTE-NCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
                L  +G+ + +K  K+      G   +K ++DVEL VDA  +++  +  ++FSGD 
Sbjct: 66  -FTRVLMAHGYHITSKPVKKIVNKETGVIVMKGNLDVELVVDALSRADQYDTFILFSGDS 124

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA-DYFMDLAYLKNEIAR 175
            F  L+ AL+ K K+V + ST      +++ +L  +    + DLA LK  I +
Sbjct: 125 DFIPLLRALKEKGKEVLVYST----QGLSARELLAEPGIAYHDLALLKERIEQ 173


>gi|312963199|ref|ZP_07777683.1| protein of unknown function DUF88 [Pseudomonas fluorescens WH6]
 gi|311282465|gb|EFQ61062.1| protein of unknown function DUF88 [Pseudomonas fluorescens WH6]
          Length = 158

 Score =  136 bits (342), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 40/164 (24%), Positives = 69/164 (42%), Gaps = 13/164 (7%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            +KIA+F D  NLY + + A G   +Y  L     +R  ++ AY Y    GD     S  
Sbjct: 1   MKKIAVFADVQNLYYTVRQAYGCHFNYAALWADISARGQIVEAYAYAIDRGD-----SKQ 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
                 L   GF V  K   +  +       K   DV + +D  + ++ ++ +V+ SGDG
Sbjct: 56  QQFQQILRNLGFTVKLKPYIQRADGSA----KGDWDVGITLDIMDAADHVDEVVLASGDG 111

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
            F  L+  +     K  + +     P + ++ L R A  ++ + 
Sbjct: 112 DFDMLLERIIH---KHGVHAVAYGVPGLTANSLIRAASRYVPIE 152


>gi|119511234|ref|ZP_01630350.1| hypothetical protein N9414_18593 [Nodularia spumigena CCY9414]
 gi|119464112|gb|EAW45033.1| hypothetical protein N9414_18593 [Nodularia spumigena CCY9414]
          Length = 173

 Score =  136 bits (342), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 50/179 (27%), Positives = 93/179 (51%), Gaps = 13/179 (7%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA---IVIRAYYYTTVVGDPE 57
           M  P  ++++F+DG N++ + +  G+  D R++L  F+       +I A++YT +     
Sbjct: 1   MGSPMNRLSIFVDGNNMFYAQQKNGWFFDPRRVLDYFKHEQSDTTLINAFWYTGLKDP-- 58

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHL 116
                     D L   G+ V  K+ KE+  ++ GR   K+++D+E+ VD F   +  + +
Sbjct: 59  ---QDQRGFRDALISLGYTVRTKILKEYYDDSSGRYSQKANLDIEIVVDMFNTVDQYDRV 115

Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
           V+FSGDG F   +  L+ K   +T+VST      M + +LR   D ++DL  +++ I +
Sbjct: 116 VLFSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDSIEK 170


>gi|212634169|ref|YP_002310694.1| hypothetical protein swp_1319 [Shewanella piezotolerans WP3]
 gi|212555653|gb|ACJ28107.1| Conserved hypothetical protein [Shewanella piezotolerans WP3]
          Length = 157

 Score =  136 bits (342), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 13/165 (7%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            +KIALF+D  N+Y + + A G   +YRKL +       +  A  Y    GD  Q     
Sbjct: 1   MKKIALFVDVQNIYYTCRQAYGRQFNYRKLWQHLGYEGEITSATAYAIHRGDDGQ----- 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
               D L + GF V  K   + ++       K   DV + +D  E +  ++ +++ SGDG
Sbjct: 56  LKFQDALKHIGFDVKLKPFIQRSDGSA----KGDWDVGITIDIMEAASEVDCVILLSGDG 111

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
            F  L+  + +   K  + + V   P + +  L   A  + ++  
Sbjct: 112 DFDLLMLKIYQ---KYGVETQVYGVPGLTAKSLIDSASQYHEIDD 153


>gi|167623131|ref|YP_001673425.1| hypothetical protein Shal_1197 [Shewanella halifaxensis HAW-EB4]
 gi|167353153|gb|ABZ75766.1| protein of unknown function DUF88 [Shewanella halifaxensis HAW-EB4]
          Length = 172

 Score =  136 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 13/164 (7%)

Query: 6   EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
           +KIALF+D  N+Y + + A G   +YRKL +       +  A  Y    GD  Q      
Sbjct: 17  KKIALFVDVQNIYYTCRQAYGRQFNYRKLWQHLGYEGNISAATAYAIHRGDDGQ-----L 71

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
              D L + GF+V  K   + ++       K   DV + +D  E +  ++ +++ SGDG 
Sbjct: 72  KFQDALKHIGFEVKLKPFIQRSDGSA----KGDWDVGITIDIMEAASEVDCVILLSGDGD 127

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
           F  L+  +++   K  I + V   PS+ +  L    + F ++  
Sbjct: 128 FDLLMQKIKQ---KYGIETQVYGVPSLTAKSLIDSVEQFHEIDD 168


>gi|15641813|ref|NP_231445.1| hypothetical protein VC1811 [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121585837|ref|ZP_01675631.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|121727642|ref|ZP_01680745.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|147673789|ref|YP_001217351.1| hypothetical protein VC0395_A1407 [Vibrio cholerae O395]
 gi|153817839|ref|ZP_01970506.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|153821111|ref|ZP_01973778.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|153828564|ref|ZP_01981231.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|227081940|ref|YP_002810491.1| hypothetical protein VCM66_1734 [Vibrio cholerae M66-2]
 gi|229508089|ref|ZP_04397594.1| hypothetical protein VCF_003323 [Vibrio cholerae BX 330286]
 gi|229511672|ref|ZP_04401151.1| hypothetical protein VCE_003081 [Vibrio cholerae B33]
 gi|229518811|ref|ZP_04408254.1| hypothetical protein VCC_002836 [Vibrio cholerae RC9]
 gi|229520283|ref|ZP_04409709.1| hypothetical protein VIF_000801 [Vibrio cholerae TM 11079-80]
 gi|229607650|ref|YP_002878298.1| hypothetical protein VCD_002562 [Vibrio cholerae MJ-1236]
 gi|254285238|ref|ZP_04960203.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|254848901|ref|ZP_05238251.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255745423|ref|ZP_05419372.1| hypothetical protein VCH_001771 [Vibrio cholera CIRS 101]
 gi|262147203|ref|ZP_06028007.1| hypothetical protein VIG_000056 [Vibrio cholerae INDRE 91/1]
 gi|262169804|ref|ZP_06037495.1| hypothetical protein VIJ_003057 [Vibrio cholerae RC27]
 gi|9656336|gb|AAF94959.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121549975|gb|EAX59993.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|121630029|gb|EAX62436.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|126511659|gb|EAZ74253.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|126521307|gb|EAZ78530.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|146315672|gb|ABQ20211.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|148875959|gb|EDL74094.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|150424510|gb|EDN16446.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|227009828|gb|ACP06040.1| conserved hypothetical protein [Vibrio cholerae M66-2]
 gi|227013710|gb|ACP09920.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|229342649|gb|EEO07641.1| hypothetical protein VIF_000801 [Vibrio cholerae TM 11079-80]
 gi|229343500|gb|EEO08475.1| hypothetical protein VCC_002836 [Vibrio cholerae RC9]
 gi|229351637|gb|EEO16578.1| hypothetical protein VCE_003081 [Vibrio cholerae B33]
 gi|229355594|gb|EEO20515.1| hypothetical protein VCF_003323 [Vibrio cholerae BX 330286]
 gi|229370305|gb|ACQ60728.1| hypothetical protein VCD_002562 [Vibrio cholerae MJ-1236]
 gi|254844606|gb|EET23020.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255737253|gb|EET92649.1| hypothetical protein VCH_001771 [Vibrio cholera CIRS 101]
 gi|262022038|gb|EEY40748.1| hypothetical protein VIJ_003057 [Vibrio cholerae RC27]
 gi|262031360|gb|EEY49970.1| hypothetical protein VIG_000056 [Vibrio cholerae INDRE 91/1]
 gi|327484370|gb|AEA78777.1| hypothetical protein VCLMA_A1565 [Vibrio cholerae LMA3894-4]
          Length = 157

 Score =  136 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 15/166 (9%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            EKIA+ +D  N+Y + +   G   DY +          V++A  Y     DP+Q     
Sbjct: 1   MEKIAILVDVQNVYYTCREQYGRHFDYNQFWSQVTQNRTVVKANAYAIASKDPQQ----- 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
                 L   GF+V+ K   + ++       K   DV +A+D +E ++ ++ +V+ SGDG
Sbjct: 56  RQFHHILRGIGFEVMLKPFIQRSDGSA----KGDWDVGIALDGYELAQEVDTVVLVSGDG 111

Query: 124 CFTTLVAAL-QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
            F  LV  + QR   KV +       P + +  L   A  F  + +
Sbjct: 112 DFEPLVTRIAQRFQVKVEV----YGVPKLTAQHLIDVASQFHPIEH 153


>gi|15789664|ref|NP_279488.1| hypothetical protein VNG0419C [Halobacterium sp. NRC-1]
 gi|169235378|ref|YP_001688578.1| hypothetical protein OE1626F [Halobacterium salinarum R1]
 gi|10580028|gb|AAG18968.1| conserved hypothetical protein [Halobacterium sp. NRC-1]
 gi|167726444|emb|CAP13229.1| conserved hypothetical protein [Halobacterium salinarum R1]
          Length = 165

 Score =  136 bits (342), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 43/168 (25%), Positives = 78/168 (46%), Gaps = 14/168 (8%)

Query: 2   FDPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
             P +++A+  D  NLY S+++    +IDY  LL        + RA  Y       ++  
Sbjct: 4   LQPAQRVAVLADSQNLYHSAQSVYSQNIDYAALLDKGVQDRELTRAIAYVIRAQSEDEDR 63

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
                  D L   GF+   K  K F +       K+  DV +++DA   ++ ++ +V+ +
Sbjct: 64  -----FFDALRDIGFETKIKAIKTFGDGS----KKADWDVGMSLDAVSLADHIDTIVLCT 114

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
           GDG F+ L   L+ +  +V +++   S    A+ +L   AD F+DL+ 
Sbjct: 115 GDGDFSRLCRHLRHEGVRVEVMAFEES----AATELVDAADSFVDLSE 158


>gi|55377125|ref|YP_134975.1| hypothetical protein rrnAC0208 [Haloarcula marismortui ATCC 43049]
 gi|55229850|gb|AAV45269.1| unknown [Haloarcula marismortui ATCC 43049]
          Length = 165

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 40/172 (23%), Positives = 78/172 (45%), Gaps = 14/172 (8%)

Query: 3   DPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            P +++A+  D  NLY ++++    +IDY  LL+       + RA  Y      PE++  
Sbjct: 5   QPGQRVAVLADAQNLYHTARSLYSRNIDYEALLEEAVDGRELTRAIAYVIRADSPEEES- 63

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
                 + L   GF+   K  K F +       K+  DV +++DA   +  ++ +V+ +G
Sbjct: 64  ----FFEALVDIGFETRIKDIKTFQDGS----KKADWDVGMSLDAVSLANHVDTVVLCTG 115

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
           DG F  +   L+ +  +V  +    S    +S+ L+   D F+D++   +  
Sbjct: 116 DGDFARVCRYLRHEGCRVEAMGFEES----SSEDLKAAVDGFIDMSDDSDRF 163


>gi|76802672|ref|YP_330767.1| hypothetical protein NP4076A [Natronomonas pharaonis DSM 2160]
 gi|76558537|emb|CAI50129.1| conserved hypothetical protein [Natronomonas pharaonis DSM 2160]
          Length = 165

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 74/172 (43%), Gaps = 14/172 (8%)

Query: 3   DPREKIALFIDGANLYASS-KALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
              +++A+  D  NLY ++      + DY +LL A      +IRA  Y      P +Q  
Sbjct: 5   HSNQRVAVLADSQNLYHTAHSYYSRNPDYTELLSAAVRDRELIRAIAYVIRADPPTEQ-- 62

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
                 + L   GF+   K  K F +       K++ D+ + +DA   +  ++  V+ SG
Sbjct: 63  ---EFFEALRDIGFETKIKDIKTFADGT----QKANWDLGMCLDAVTLAPKIDTFVLASG 115

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
           DG F  L   L+ +  +  +     S     +++L   AD ++D++  ++  
Sbjct: 116 DGDFARLCTHLRHEGVRTEVFGFGDS----TAEELIDAADSYVDMSEDEDRF 163


>gi|218246675|ref|YP_002372046.1| hypothetical protein PCC8801_1847 [Cyanothece sp. PCC 8801]
 gi|257059717|ref|YP_003137605.1| hypothetical protein Cyan8802_1873 [Cyanothece sp. PCC 8802]
 gi|218167153|gb|ACK65890.1| protein of unknown function DUF88 [Cyanothece sp. PCC 8801]
 gi|256589883|gb|ACV00770.1| protein of unknown function DUF88 [Cyanothece sp. PCC 8802]
          Length = 178

 Score =  135 bits (341), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 47/175 (26%), Positives = 93/175 (53%), Gaps = 12/175 (6%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIV--IRAYYYTTVVGDPEQQFS 61
           P+E++++F+DG N++ + +   +  D R++L+ F +   +  + A++YT +     +   
Sbjct: 10  PKERLSIFVDGNNMFYAQQKNSWFFDPRRVLEYFTNDPTITLVNAFWYTGL-----KDSQ 64

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
                 D L   G+ V  K+ KE+  +  GR   K+++D+E+ VD F   +  + +++FS
Sbjct: 65  DQRGFRDALISLGYTVRTKILKEYYDDTSGRYSQKANLDIEIVVDMFNTVDQYDRVILFS 124

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
           GDG F   +  L+ K   +T+VST      M + +LR   D ++DL  ++  I +
Sbjct: 125 GDGDFERAIELLRSKSTHITVVST----EGMIARELRNATDRYIDLNDIRPHIEK 175


>gi|307153372|ref|YP_003888756.1| hypothetical protein Cyan7822_3539 [Cyanothece sp. PCC 7822]
 gi|306983600|gb|ADN15481.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7822]
          Length = 180

 Score =  135 bits (340), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 48/178 (26%), Positives = 94/178 (52%), Gaps = 12/178 (6%)

Query: 3   DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAI--VIRAYYYTTVVGDPEQQF 60
            P++++++F+DG N++ + +  G+  D R++L  F +     +I A++YT +     +  
Sbjct: 11  YPKDRLSIFVDGNNMFYAQQKNGWFFDPRRVLDHFTNDPTVTLINAFWYTGL-----KDS 65

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119
                  D L   G+ V  K+ KE+  ++ GR   K+++D+E+ VD F   +  + +++F
Sbjct: 66  QDQRGFRDALISLGYTVRTKILKEYYDDSSGRYSQKANLDIEIVVDMFNTVDQYDRVILF 125

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
           SGDG F   +  L+ K   +T+VST      M + +LR   D ++DL  ++  I +  
Sbjct: 126 SGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRTFIEKTD 179


>gi|229523840|ref|ZP_04413245.1| hypothetical protein VCA_001419 [Vibrio cholerae bv. albensis
           VL426]
 gi|229337421|gb|EEO02438.1| hypothetical protein VCA_001419 [Vibrio cholerae bv. albensis
           VL426]
          Length = 157

 Score =  135 bits (340), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 40/166 (24%), Positives = 69/166 (41%), Gaps = 15/166 (9%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            EKIA+ +D  N+Y + +   G   DY +          V++A  Y         +    
Sbjct: 1   MEKIAILVDVQNVYYTCREQYGRHFDYNQFWSQVTQNRTVVKANAYAIA-----SKAPQQ 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
                 L   GF+V+ K   + ++       K   DV +A+D +E ++ ++ +V+ SGDG
Sbjct: 56  RQFHHILRGIGFEVMLKPFIQRSDGSA----KGDWDVGIALDGYELAQEVDTVVLVSGDG 111

Query: 124 CFTTLVAAL-QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
            F  LV  + QR   KV +       P + +  L   A  F  + +
Sbjct: 112 DFEPLVTRIAQRFQVKVEV----YGVPKLTAQHLIDVASQFHPIEH 153


>gi|91791739|ref|YP_561390.1| hypothetical protein Sden_0372 [Shewanella denitrificans OS217]
 gi|91713741|gb|ABE53667.1| protein of unknown function DUF88 [Shewanella denitrificans OS217]
          Length = 184

 Score =  135 bits (340), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 13/165 (7%)

Query: 4   PREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
             +KIALF+D  N+Y + + A G   +YRKL +    +  +++A  Y    GD  Q    
Sbjct: 27  KSKKIALFVDVQNIYYTCREAYGRQFNYRKLWQLVSQQGEIVQAVAYAIHKGDDGQ---- 82

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
                D L + GF+V  K   +  +       K   DV + +D  E +  +  +++ SGD
Sbjct: 83  -LKFQDALKHIGFEVKLKPFIQRADGSA----KGDWDVGITIDVMEAAADVNTVILLSGD 137

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
           G F  L+  + +   K  + + V   PS+ +  L   A  F  + 
Sbjct: 138 GDFDRLLVKIYQ---KHGVDTQVYGVPSLTAKSLMDSAGQFHPID 179


>gi|119476672|ref|ZP_01616982.1| hypothetical protein GP2143_03548 [marine gamma proteobacterium
           HTCC2143]
 gi|119449928|gb|EAW31164.1| hypothetical protein GP2143_03548 [marine gamma proteobacterium
           HTCC2143]
          Length = 158

 Score =  135 bits (339), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 39/166 (23%), Positives = 71/166 (42%), Gaps = 15/166 (9%)

Query: 5   REKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            EK+A+F+D  N+Y +++     + DY K      S   V++A  Y T  GD        
Sbjct: 1   MEKVAIFVDVQNVYYTTRQTFRKNFDYNKFWLKACSSREVVKAIAYATDRGD-----QKQ 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
           H   + L   GF+V  K   + ++       K   DV + +D  E ++ +  +++ SGDG
Sbjct: 56  HEFQNILRAIGFEVKLKPFIQRSDGSA----KGDWDVGITIDIMECADDVAVVILVSGDG 111

Query: 124 CFTTLVAALQ-RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
            F  L   ++  + K+V +         + +  L   A  F+ +  
Sbjct: 112 DFDLLAQKIRVERGKRVEV----YGVAQLTAKSLINAATEFIPIDK 153


>gi|257389218|ref|YP_003178991.1| hypothetical protein Hmuk_3179 [Halomicrobium mukohataei DSM 12286]
 gi|257171525|gb|ACV49284.1| protein of unknown function DUF88 [Halomicrobium mukohataei DSM
           12286]
          Length = 165

 Score =  135 bits (339), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 41/171 (23%), Positives = 78/171 (45%), Gaps = 14/171 (8%)

Query: 3   DPREKIALFIDGANLYASSKALG-FDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            P +++ +  D  NLY ++++L   +IDY  LL    +   + RA  Y      P+++  
Sbjct: 5   HPGQRVGVLADAQNLYHTARSLHTRNIDYEALLDEAVNDRALTRAIAYVIRANSPDEES- 63

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
                 + L   GF+   K  K F +       K+  DV +++DA   +  ++ +V+ +G
Sbjct: 64  ----FFEALEDIGFETRIKDIKTFGDGS----KKADWDVGMSLDAVSLAPHVDTVVLITG 115

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
           DG F  L   L+ +  KV  +    S     +++L   AD+F +L+    +
Sbjct: 116 DGDFARLCRYLRHEGVKVETMGFEES----TAEELVEAADHFRNLSDDAEQ 162


>gi|298492621|ref|YP_003722798.1| hypothetical protein Aazo_4322 ['Nostoc azollae' 0708]
 gi|298234539|gb|ADI65675.1| protein of unknown function DUF88 ['Nostoc azollae' 0708]
          Length = 173

 Score =  135 bits (339), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 49/182 (26%), Positives = 95/182 (52%), Gaps = 13/182 (7%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA---IVIRAYYYTTVVGDPE 57
           M     ++++F+DG N++ + +  G+  D R++L+ F++      +I A++YT +     
Sbjct: 1   MGSMMNRLSIFVDGNNMFYAQQKNGWFFDPRRVLEYFKNEQPETTLINAFWYTGLKDP-- 58

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHL 116
                     D L   G+ V  K+ KE+ ++  GR   K+++D+E+ VD F   +  + +
Sbjct: 59  ---QDQRGFRDALISLGYTVRTKILKEYYDDVSGRYSQKANLDIEIVVDMFNTVDQYDRV 115

Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
           V+FSGDG F   +  L+ K   +T+VST      M + +LR   D ++DL  ++++I + 
Sbjct: 116 VLFSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDQIEKT 171

Query: 177 PD 178
             
Sbjct: 172 EA 173


>gi|261211879|ref|ZP_05926166.1| hypothetical protein VCJ_002142 [Vibrio sp. RC341]
 gi|260839229|gb|EEX65861.1| hypothetical protein VCJ_002142 [Vibrio sp. RC341]
          Length = 157

 Score =  135 bits (339), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 43/166 (25%), Positives = 71/166 (42%), Gaps = 15/166 (9%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            EKIA+ +D  N+Y + +   G   DY +          V++A  Y     DP+Q     
Sbjct: 1   MEKIAILVDVQNVYYTCRERYGRHFDYNQFWSQATQGRAVVKANAYAIASKDPQQ----- 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
                 L   GF+V+ K   + ++       K   DV +A+D +E ++ +  +V+ SGDG
Sbjct: 56  RQFHHILRGIGFEVMLKPFIQRSDGSA----KGDWDVGIALDGYELAQEVNTVVLVSGDG 111

Query: 124 CFTTLVAAL-QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
            F  LV  + QR   KV +       P + +  L   A  F  + +
Sbjct: 112 DFEPLVTRIAQRFQVKVEV----YGVPKLTAQHLIDVASQFHPIEH 153


>gi|229529164|ref|ZP_04418554.1| hypothetical protein VCG_002257 [Vibrio cholerae 12129(1)]
 gi|229332938|gb|EEN98424.1| hypothetical protein VCG_002257 [Vibrio cholerae 12129(1)]
          Length = 157

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 40/166 (24%), Positives = 69/166 (41%), Gaps = 15/166 (9%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            EKIA+ +D  N+Y + +   G   DY +          V++A  Y         +    
Sbjct: 1   MEKIAILVDVQNVYYTCREQYGRHFDYNQFWSQVTQNRTVVKANAYAIA-----SKAPQQ 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
                 L   GF+V+ K   + ++       K   DV +A+D +E ++ ++ +V+ SGDG
Sbjct: 56  RQFHHILRGIGFEVMLKPFIQRSDGSA----KGDWDVGIALDGYELAQEVDTVVLVSGDG 111

Query: 124 CFTTLVAAL-QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
            F  LV  + QR   KV +       P + +  L   A  F  + +
Sbjct: 112 DFEPLVTRIAQRFQVKVEV----YGVPKLTAQHLIDVASQFHPIEH 153


>gi|27366806|ref|NP_762333.1| hypothetical protein VV2_0365 [Vibrio vulnificus CMCP6]
 gi|320158689|ref|YP_004191067.1| hypothetical protein VVM_01748 [Vibrio vulnificus MO6-24/O]
 gi|27358373|gb|AAO07323.1| hypothetical protein VV2_0365 [Vibrio vulnificus CMCP6]
 gi|319934001|gb|ADV88864.1| hypothetical protein VVMO6_03842 [Vibrio vulnificus MO6-24/O]
          Length = 162

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 15/170 (8%)

Query: 1   MFDPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
           M     K+A+F+D  N+Y + K       DY +  ++      V+ A+ Y     DP Q 
Sbjct: 1   MRVMTSKVAIFVDVQNIYYTCKEKYRKHFDYNRFWQSATQGKQVVVAHAYAISSKDPGQ- 59

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119
                     L   GF V  K   +  +       K   DV LA+DAFE +  ++ +++ 
Sbjct: 60  ----RQFHHILRGIGFDVKLKPFIQRWDGSA----KGDWDVGLALDAFEHAPMVDEVILL 111

Query: 120 SGDGCFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
           SGDG F  LV  +Q+K  KKVT+       P + +  L+   D ++ +  
Sbjct: 112 SGDGDFEILVERIQQKFGKKVTV----YGVPGLTAQNLQAVVDKYIPIED 157


>gi|104783731|ref|YP_610229.1| hypothetical protein PSEEN4789 [Pseudomonas entomophila L48]
 gi|95112718|emb|CAK17446.1| conserved hypothetical protein [Pseudomonas entomophila L48]
          Length = 167

 Score =  134 bits (338), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 41/163 (25%), Positives = 66/163 (40%), Gaps = 13/163 (7%)

Query: 6   EKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
           +KIALF D  NLY + +   G   +Y  L         ++ A  Y    GD     S   
Sbjct: 10  KKIALFADVQNLYYTVRQVHGCHFNYTTLWAEVSREGQIVEAVAYAIDRGD-----SKQQ 64

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
                L   GF+V  K   +  +       K   DV + +D  E +E ++ +V+ SGDG 
Sbjct: 65  QFQQILRNLGFEVRLKPYIQRADGSA----KGDWDVGITLDVIEAAERVDQVVLASGDGD 120

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
           F  L+       K+  + + V   P + +  L R A  ++ + 
Sbjct: 121 FDLLLERA---AKRHGVETVVYGVPGLTALSLIRSASRYVPIE 160


>gi|153826226|ref|ZP_01978893.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|149739991|gb|EDM54166.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
          Length = 157

 Score =  134 bits (338), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 42/166 (25%), Positives = 72/166 (43%), Gaps = 15/166 (9%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            EKIA+ +D  N+Y + +   G   +Y +          V++A  Y     DP+Q     
Sbjct: 1   MEKIAILVDVQNVYYTCREQYGRHFEYNQFWSQVTQNRTVVKANAYAIASKDPQQ----- 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
                 L   GF+V+ K   + ++       K   DV +A+D +E ++ ++ +V+ SGDG
Sbjct: 56  RQFHHILRGIGFEVMLKPFIQRSDGSA----KGDWDVGIALDGYELAQEVDTVVLVSGDG 111

Query: 124 CFTTLVAAL-QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
            F  LV  + QR   KV +       P + +  L   A  F  + +
Sbjct: 112 DFEPLVTRIAQRFQVKVEV----YGVPKLTAQHLIDVASQFHPIEH 153


>gi|166368642|ref|YP_001660915.1| hypothetical protein MAE_59010 [Microcystis aeruginosa NIES-843]
 gi|159030407|emb|CAO91305.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
 gi|166091015|dbj|BAG05723.1| hypothetical protein MAE_59010 [Microcystis aeruginosa NIES-843]
          Length = 183

 Score =  134 bits (337), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 49/177 (27%), Positives = 95/177 (53%), Gaps = 12/177 (6%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIV--IRAYYYTTVVGDPEQQFS 61
           P++++++F+DG N++ + +  G+  D RK+L  F +   +  I A++YT +     +   
Sbjct: 15  PKDRLSIFVDGNNMFYAQQKNGWFFDPRKVLNYFTNDPNIMLINAFWYTGL-----KDSQ 69

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
                 D L   G+ V  K+ KE+  ++ GR   K+++D+E+ VD F   +  + +++FS
Sbjct: 70  DQRGFRDALISLGYTVRTKILKEYYDDSSGRFSQKANLDIEIVVDMFNTVDQYDRVILFS 129

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
           GDG F   +  L+ K   +T+VST      M + +LR   D ++DL  ++ +I +  
Sbjct: 130 GDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRKDIEKSD 182


>gi|186681406|ref|YP_001864602.1| hypothetical protein Npun_F0925 [Nostoc punctiforme PCC 73102]
 gi|186463858|gb|ACC79659.1| protein of unknown function DUF88 [Nostoc punctiforme PCC 73102]
          Length = 169

 Score =  134 bits (337), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 48/177 (27%), Positives = 92/177 (51%), Gaps = 13/177 (7%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA---IVIRAYYYTTVVGDPEQQFS 61
             ++++F+DG N++ + +  G+  D R++L+ F+       +I A++YT +         
Sbjct: 1   MNRLSIFVDGNNMFYAQQKNGWFFDPRRVLEYFKHEQSETTLINAFWYTGLKDP-----Q 55

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
                 D L   G+ V  K+ KE+  +  GR   K+++D+E+ VD F   +  + +V+FS
Sbjct: 56  DQRGFRDALISLGYTVRTKILKEYYDDTSGRYSQKANLDIEIVVDMFNTVDQYDRVVLFS 115

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
           GDG F   +  L+ K   +T+VST      M + +LR   D ++DL  ++++I +  
Sbjct: 116 GDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDQIEKTE 168


>gi|225848799|ref|YP_002728963.1| RtsE [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225644319|gb|ACN99369.1| RtsE [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 174

 Score =  133 bits (336), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 46/176 (26%), Positives = 84/176 (47%), Gaps = 14/176 (7%)

Query: 3   DPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
              +++A+F+D  NLY S++      +++  +L+      I++RA+ Y   +   +Q   
Sbjct: 6   YNNQRVAVFVDIQNLYYSARDTFNRKVNFESILQKTVGDRILVRAFAYIVKLHGVDQ--- 62

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFT----ENCGRKRVKSSMDVELAVDAFEQSEGLEHLV 117
                ++ L + G+QV  K  K F     E      +K+  D+ +A+DA   ++ ++  V
Sbjct: 63  --KGFINTLKHIGYQVREKEPKIFKRLDEEGNLWTTIKADWDMGIAIDAISLADKIDVAV 120

Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
           + +GDG F  LV  LQ K  KV I +   +     + +L   AD F+DL     +I
Sbjct: 121 LTTGDGDFKDLVKYLQTKGVKVEIAAFKQT----TAKELIEAADEFIDLNIYGEDI 172


>gi|220910043|ref|YP_002485354.1| hypothetical protein Cyan7425_4688 [Cyanothece sp. PCC 7425]
 gi|219866654|gb|ACL46993.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7425]
          Length = 172

 Score =  133 bits (336), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 49/172 (28%), Positives = 91/172 (52%), Gaps = 12/172 (6%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA--IVIRAYYYTTVVGDPEQQFSPLH 64
           ++++F+DG N++ + +  G+  D R++L  F S     ++ A++YT +            
Sbjct: 7   RVSIFVDGNNMFYAQQKNGWFFDPRRVLDYFTSEPSVTLVNAFWYTGLKDP-----QDQR 61

Query: 65  PLLDWLHYNGFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
              D L   G+ V  K+ KE+  +N GR   K+++D+E+ VD F   E  + +++FSGDG
Sbjct: 62  GFRDALISLGYTVRTKILKEYYDDNSGRYSQKANLDIEIVVDMFNTVEQYDRVILFSGDG 121

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
            F   +  L+ K   +T+VST      M + +LR   D ++DL  ++ +I +
Sbjct: 122 DFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRPKIEK 169


>gi|163785396|ref|ZP_02180018.1| hypothetical protein HG1285_09231 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879334|gb|EDP73216.1| hypothetical protein HG1285_09231 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 186

 Score =  133 bits (335), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 15/174 (8%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP-----EQQ 59
            EKIA+FID  N++ +S      I+Y+KL++  R    ++RAY+YT V         ++Q
Sbjct: 21  DEKIAIFIDAGNMFHASNYYKIKINYKKLVEFLRRDRWLLRAYFYTGVPTQDLDKSLKEQ 80

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLV 117
           +      L+ L   G +V     K+  E      ++  +DV LA D    +     +  +
Sbjct: 81  WKKQKGFLNELQNLGIKVKTMPLKKTPEGF----IEKGVDVLLATDMVSLAFRNAYDTAI 136

Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
           + SGD  +  +V  +Q   K+V   S   +    +S +LR+  D F+ L    +
Sbjct: 137 LVSGDSDYVPVVEEIQELGKRVENASFKRT----SSFELRKVCDRFILLDNFMD 186


>gi|119356319|ref|YP_910963.1| hypothetical protein Cpha266_0482 [Chlorobium phaeobacteroides DSM
           266]
 gi|119353668|gb|ABL64539.1| protein of unknown function DUF88 [Chlorobium phaeobacteroides DSM
           266]
          Length = 287

 Score =  133 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 52/171 (30%), Positives = 89/171 (52%), Gaps = 9/171 (5%)

Query: 6   EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
           ++ A++IDGANL+ + ++LG+ ID+ +L+  F  R   + A YY  V     ++ +    
Sbjct: 4   KRAAVYIDGANLFFTQRSLGWQIDFSRLITFFLDRYASVEARYYVPVSEPASEEQAA--- 60

Query: 66  LLDWLHYNGFQVVAKVAKEFTE-NCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
               L  +G+ + +K  K+      G   +K ++DVELAVDA       +  ++FSGD  
Sbjct: 61  FTRVLAAHGYILTSKPVKKIVNKTTGEIIIKGNLDVELAVDALVGEIAYDTFILFSGDSD 120

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQ-LRRQADYFMDLAYLKNEIA 174
           F  L+ AL+ K K+V + ST      +++ + L      F DLA L++ I 
Sbjct: 121 FLPLLRALKEKGKEVLVYST----EGISAWELLIEPGIDFHDLAGLRDRIG 167


>gi|260769223|ref|ZP_05878156.1| hypothetical protein VFA_002281 [Vibrio furnissii CIP 102972]
 gi|260614561|gb|EEX39747.1| hypothetical protein VFA_002281 [Vibrio furnissii CIP 102972]
 gi|315181763|gb|ADT88676.1| hypothetical protein vfu_B00438 [Vibrio furnissii NCTC 11218]
          Length = 157

 Score =  133 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 38/165 (23%), Positives = 68/165 (41%), Gaps = 15/165 (9%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            E IA+ +D  N+Y + K       +Y    +   +   V++A  Y     D     S  
Sbjct: 1   METIAILVDVQNVYYTCKERYQRHFNYNHFWQQVTNGRHVVKANAYAIASND-----SRQ 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
                 L   GF+V+ K   + ++       K   DV + +DA E +  ++ +V+ SGDG
Sbjct: 56  RQFHHILRGIGFEVMLKPYIQRSDGSA----KGDWDVGITLDAIELAPDVDTVVLVSGDG 111

Query: 124 CFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
            F  L   +Q K  K+V +       P + +  L   A+ ++ + 
Sbjct: 112 DFDILAKRIQDKYGKQVEV----YGVPGLTARSLVDAANRYVTIE 152


>gi|37676581|ref|NP_936977.1| hypothetical protein VVA0921 [Vibrio vulnificus YJ016]
 gi|37201124|dbj|BAC96947.1| uncharacterized conserved protein [Vibrio vulnificus YJ016]
          Length = 162

 Score =  133 bits (334), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 46/170 (27%), Positives = 74/170 (43%), Gaps = 15/170 (8%)

Query: 1   MFDPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
           M     K+A+F+D  N+Y + K       DY +  ++      V+ A+ Y     DP Q 
Sbjct: 1   MRVMTSKVAIFVDVQNIYYTCKEKYRKHFDYNRFWQSATQDKQVVVAHAYAISSKDPGQ- 59

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119
                     L   GF V  K   +  +       K   DV LA+DAFE +  ++ +++ 
Sbjct: 60  ----RQFHHILRGIGFDVKLKPFIQRWDGSA----KGDWDVGLALDAFEHAPMVDEVILL 111

Query: 120 SGDGCFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
           SGDG F  LV  +Q+K  KKVT+       P + +  L+   D ++ +  
Sbjct: 112 SGDGDFEILVERIQQKFGKKVTV----YGVPGLTAQNLQAVVDKYIPIED 157


>gi|146284019|ref|YP_001174172.1| hypothetical protein PST_3707 [Pseudomonas stutzeri A1501]
 gi|145572224|gb|ABP81330.1| conserved hypothetical protein [Pseudomonas stutzeri A1501]
          Length = 197

 Score =  132 bits (333), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 41/163 (25%), Positives = 68/163 (41%), Gaps = 14/163 (8%)

Query: 6   EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
           +KIALF D  NLY + + A G   +Y  L      R  ++ AY Y    GDP        
Sbjct: 41  KKIALFADVQNLYYTVRQAHGCHFNYSALWADVSRRGTIVEAYAYAIERGDP-----RQQ 95

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
                L   GF V  K   + ++       K   DV + +D  + +  ++ +V+ SGDG 
Sbjct: 96  QFQQILRKLGFTVKLKPYIQRSDGSA----KGDWDVGITIDVLDAAARVDEVVLASGDGD 151

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
           F  L+  ++    +    +T    P + +  L R A  ++ + 
Sbjct: 152 FDLLLERVRAGGAE----ATAYGVPGLTAQSLIRAATRYVPVE 190


>gi|189347490|ref|YP_001944019.1| hypothetical protein Clim_2008 [Chlorobium limicola DSM 245]
 gi|189341637|gb|ACD91040.1| protein of unknown function DUF88 [Chlorobium limicola DSM 245]
          Length = 304

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 56/177 (31%), Positives = 93/177 (52%), Gaps = 9/177 (5%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
             +K ALFIDGANL+ + + LG+ ID+ +L+  F +R  V+ A YY      P +     
Sbjct: 29  SMQKAALFIDGANLFYTQRHLGWQIDFSRLMLYFTNRYTVVSARYYVPSPDPPSEDQVA- 87

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
                 L  +GF++++K  K+      G   +K ++D+ELAVDA       E  V+FSGD
Sbjct: 88  --FNRVLITHGFEIISKPVKKIVNRDTGEIIMKGNLDIELAVDAMLTEHQFEVFVLFSGD 145

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD-YFMDLAYLKNEIARDPD 178
             F  L+ A+Q K K V++ ST      +++ +L   +D  F D++ +  E+++   
Sbjct: 146 SDFLPLIMAMQMKGKTVSVFST----RGISARELYSGSDMDFHDISLMAVEMSQSQS 198


>gi|237755695|ref|ZP_04584304.1| RtsE [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237692145|gb|EEP61144.1| RtsE [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 174

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 47/176 (26%), Positives = 83/176 (47%), Gaps = 14/176 (7%)

Query: 3   DPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
              +++A+F+D  NLY S++      +++  +L       I++RA+ Y   +   +Q   
Sbjct: 6   YNNQRVAIFVDIQNLYYSARDTFNRKVNFESILYKTLGDRILVRAFAYIVKLQGVDQ--- 62

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFT----ENCGRKRVKSSMDVELAVDAFEQSEGLEHLV 117
                ++ L + G+QV  K  K F     E      +K+  D+ +A+DA   SE ++  +
Sbjct: 63  --KGFINTLKHIGYQVREKEPKIFKRLDEEGNLWTTIKADWDMGIAIDAIALSEKIDVAI 120

Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
           + +GDG F  LV  LQ K  KV I +   +     + +L   AD F+DL     +I
Sbjct: 121 LTTGDGDFKDLVKYLQTKGVKVEIAAFKQT----TAKELIEVADEFIDLTTFGEDI 172


>gi|158333892|ref|YP_001515064.1| hypothetical protein AM1_0704 [Acaryochloris marina MBIC11017]
 gi|158304133|gb|ABW25750.1| conserved hypothetical protein [Acaryochloris marina MBIC11017]
          Length = 172

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 45/174 (25%), Positives = 88/174 (50%), Gaps = 12/174 (6%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRS--RAIVIRAYYYTTVVGDPEQQFSPLH 64
           + ++F+DG N++ + +  G+  D R++L  F       +I A++YT +            
Sbjct: 7   RTSIFVDGNNMFYAQQKNGWFFDPRRILNYFTEPTDVRLINAFWYTGLKDP-----QDQR 61

Query: 65  PLLDWLHYNGFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
              D L   G+ V  K+ KE+  ++ GR   K+++D+E+ +D F   +  + +++ SGDG
Sbjct: 62  GFRDALISLGYTVRTKILKEYYDDSSGRYSQKANLDIEIVIDMFNTVDQYDQVILLSGDG 121

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
            F   +  L+ K   +T+VST      M + +LR   D ++DL  +++ I +  
Sbjct: 122 DFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNKIRDRIEKTE 171


>gi|67925984|ref|ZP_00519254.1| Protein of unknown function DUF88 [Crocosphaera watsonii WH 8501]
 gi|67852173|gb|EAM47662.1| Protein of unknown function DUF88 [Crocosphaera watsonii WH 8501]
          Length = 178

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 49/175 (28%), Positives = 93/175 (53%), Gaps = 12/175 (6%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAI--VIRAYYYTTVVGDPEQQFS 61
            +E++++F+DG N++ + +  G+  D R++L  F +     +I A++YT +     +   
Sbjct: 10  QKERLSIFVDGNNMFYAQQKNGWFFDPRRVLDYFTNDPHVSLINAFWYTGL-----KDSQ 64

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
                 D L   G+ V  K+ KE+  +  GR   K+++D+E+ VD F   +  + +++FS
Sbjct: 65  DQRGFRDALISLGYTVRTKILKEYYDDTSGRYSQKANLDIEIVVDMFNTVDQYDRVILFS 124

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
           GDG F   +  L+ K   +T+VST      M + +LR   D ++DL  +K+ I +
Sbjct: 125 GDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIKDSIEK 175


>gi|24374996|ref|NP_719039.1| hypothetical protein SO_3490 [Shewanella oneidensis MR-1]
 gi|24349728|gb|AAN56483.1|AE015785_6 conserved hypothetical protein [Shewanella oneidensis MR-1]
          Length = 157

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 38/165 (23%), Positives = 71/165 (43%), Gaps = 13/165 (7%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
             KIALF+D  N+Y + + A     +YRKL +   ++  ++ A  Y    GD  Q     
Sbjct: 1   MNKIALFVDVQNIYYTCREAYQRQFNYRKLWQHLSTQGEIVSAVAYAIHRGDDGQ----- 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
               D L + GF++  K   + ++       K   DV + +D  + +  ++ +++ SGDG
Sbjct: 56  LKFQDALRHIGFELKLKPFIQRSDGSA----KGDWDVGITIDVLDAAPNVDTVILLSGDG 111

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
            F  L+  + +   K  + + V   P + +  L      F  +  
Sbjct: 112 DFAILLEKITQ---KYGVKAEVYGVPQLTAKALMDATTQFNPIDD 153


>gi|86607567|ref|YP_476329.1| hypothetical protein CYB_0065 [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86556109|gb|ABD01066.1| conserved hypothetical protein [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 175

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 51/184 (27%), Positives = 91/184 (49%), Gaps = 15/184 (8%)

Query: 1   MFDPRE--KIALFIDGANLYASSKALGFDIDYRKLLKAFRS---RAIVIRAYYYTTVVGD 55
           MF      ++++FIDG N++ + +  G+  D R++L  F        ++ A++YT +   
Sbjct: 1   MFYHHPVTRVSIFIDGNNMFYAQQKNGWFFDPRRVLDYFVRSQPNVELVNAFWYTGIKDP 60

Query: 56  PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLE 114
            +Q         D L   GF V  K+ KE+ +   GR   K+++D+E+ +D F      +
Sbjct: 61  HDQ-----RAFRDALISMGFTVRTKILKEYRDEDSGRYSQKANLDIEIVIDMFNTVGQYD 115

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
            +++FSGDG F   V  L+ K   +T+VST      M + +LR   D ++DL  ++  I 
Sbjct: 116 RIILFSGDGDFERAVELLRSKNTLITVVST----EGMIARELRNATDRYIDLNDIRPYIE 171

Query: 175 RDPD 178
           +   
Sbjct: 172 KLDK 175


>gi|163751027|ref|ZP_02158258.1| hypothetical protein KT99_04722 [Shewanella benthica KT99]
 gi|161329188|gb|EDQ00187.1| hypothetical protein KT99_04722 [Shewanella benthica KT99]
          Length = 159

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 40/165 (24%), Positives = 76/165 (46%), Gaps = 13/165 (7%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            +KIA+F+D  N+Y + + A G   +YRKL +    +  ++ A  Y    GD  Q     
Sbjct: 3   NKKIAIFVDVQNIYYTCRQAYGRQFNYRKLWQHIGHKGDIVSATAYAIHKGDEGQ----- 57

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
               D L + GF +  K   + ++       K   DV +A+D  E +  ++ +++ SGDG
Sbjct: 58  LKFQDALKHIGFDIKLKPFIQRSDGSA----KGDWDVGIAIDVMEAAAEVDTIILLSGDG 113

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
            F  L+  + +   K  + + V   P++ +  L   +  F+++  
Sbjct: 114 DFDLLMLKIYQ---KYGVDTQVYGVPALTAKSLIDASCKFIEIDE 155


>gi|330504961|ref|YP_004381830.1| hypothetical protein MDS_4047 [Pseudomonas mendocina NK-01]
 gi|328919247|gb|AEB60078.1| hypothetical protein MDS_4047 [Pseudomonas mendocina NK-01]
          Length = 159

 Score =  132 bits (332), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 14/164 (8%)

Query: 5   REKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            +KIA+F D  NLY + +   G   DY  L      R +++ AY Y    GD +QQ    
Sbjct: 1   MKKIAVFADVQNLYYTVRQVHGCHFDYSVLWAEVSRRGVIVEAYAYAIDRGDAKQQQ--- 57

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
                 L   GF V  K   +  +       K   DV + +D  +  E ++ +V+ SGDG
Sbjct: 58  --FQQILRKLGFTVKLKPYIQRADGSA----KGDWDVGITIDVLDAVERVDEIVLASGDG 111

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
            F  L+  ++ +     + +     P + +  L R A  ++ + 
Sbjct: 112 DFDLLLERVRSRG----VEAIAFGAPGLTAQSLIRAASLYVPIE 151


>gi|172038230|ref|YP_001804731.1| hypothetical protein cce_3317 [Cyanothece sp. ATCC 51142]
 gi|171699684|gb|ACB52665.1| unknown [Cyanothece sp. ATCC 51142]
          Length = 178

 Score =  132 bits (331), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 49/175 (28%), Positives = 93/175 (53%), Gaps = 12/175 (6%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAI--VIRAYYYTTVVGDPEQQFS 61
            +E++++F+DG N++ + +  G+  D R++L  F +     +I A++YT +     +   
Sbjct: 10  QKERLSIFVDGNNMFYAQQKNGWFFDPRRVLDYFTNDPHVSLINAFWYTGL-----KDSQ 64

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
                 D L   G+ V  K+ KE+  +  GR   K+++D+E+ VD F   +  + +++FS
Sbjct: 65  DQRGFRDALISLGYTVRTKILKEYYDDTSGRYSQKANLDIEIVVDMFNTVDQYDRVILFS 124

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
           GDG F   +  L+ K   +T+VST      M + +LR   D ++DL  +K+ I +
Sbjct: 125 GDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIKDSIEK 175


>gi|114766684|ref|ZP_01445623.1| hypothetical protein 1100011001297_R2601_11634 [Pelagibaca
           bermudensis HTCC2601]
 gi|114541074|gb|EAU44129.1| hypothetical protein R2601_11634 [Roseovarius sp. HTCC2601]
          Length = 117

 Score =  132 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 52/104 (50%), Positives = 76/104 (73%)

Query: 77  VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKV 136
           +V K AKE+T++ GR++VK +MD+EL VDA E +  ++H+V+FSGDG F  LV +LQR+ 
Sbjct: 1   MVTKPAKEYTDSQGRRKVKGNMDIELTVDAMELAPRVDHIVLFSGDGDFRPLVESLQRQG 60

Query: 137 KKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
            +V++VST+ S P M +D+LRRQAD F++L  L+  I R P E 
Sbjct: 61  VRVSVVSTIRSQPPMIADELRRQADNFIELDELREVIGRPPREQ 104


>gi|86605299|ref|YP_474062.1| hypothetical protein CYA_0583 [Synechococcus sp. JA-3-3Ab]
 gi|86553841|gb|ABC98799.1| conserved hypothetical protein [Synechococcus sp. JA-3-3Ab]
          Length = 174

 Score =  132 bits (331), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 52/183 (28%), Positives = 92/183 (50%), Gaps = 14/183 (7%)

Query: 1   MF-DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRS---RAIVIRAYYYTTVVGDP 56
           MF  P  ++++FIDG N++ + +  G+  D R++L  F        ++ A++YT +    
Sbjct: 1   MFRHPVTRVSIFIDGNNMFYAQQKNGWFFDPRRVLDYFVRSQPNVELVNAFWYTGIKDPN 60

Query: 57  EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEH 115
           +Q         D L   GF V  K+ KE+ +   GR   K+++D+E+ +D F      + 
Sbjct: 61  DQ-----RAFRDALISLGFTVRTKILKEYRDEDSGRYSQKANLDIEIVIDMFNTVGQYDR 115

Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
           +++FSGDG F   V  L+ K   +T+VST      M + +LR   D ++DL  ++  I +
Sbjct: 116 IILFSGDGDFERAVELLRSKNTLITVVST----EGMIARELRNATDRYIDLNDIRPYIEK 171

Query: 176 DPD 178
              
Sbjct: 172 LDK 174


>gi|293605834|ref|ZP_06688205.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
           43553]
 gi|292815747|gb|EFF74857.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
           43553]
          Length = 673

 Score =  131 bits (330), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 45/187 (24%), Positives = 69/187 (36%), Gaps = 25/187 (13%)

Query: 1   MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
           M  P E +  ALF D  N+    +   +   D R +L+    +  ++    Y        
Sbjct: 10  MTTPNENVSMALFCDFENVALGVRDTKYQKFDIRPVLERLLLKGSIVVKKAYC------- 62

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114
             +         +H   F+++            R+  K+S D+ L VDA +       + 
Sbjct: 63  -DWERYKEFKAPMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDFCYTKSHVN 114

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
             VI SGD  F+ LV+ L+   KKV  V          SD L    D F+    L  EI 
Sbjct: 115 TFVIISGDSDFSPLVSKLRENNKKVIGV----GVKQSTSDLLIANCDEFIFYDDLAREIQ 170

Query: 175 RDPDEDK 181
           R  D  +
Sbjct: 171 RTADARR 177


>gi|113477728|ref|YP_723789.1| hypothetical protein Tery_4322 [Trichodesmium erythraeum IMS101]
 gi|110168776|gb|ABG53316.1| protein of unknown function DUF88 [Trichodesmium erythraeum IMS101]
          Length = 171

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 49/179 (27%), Positives = 92/179 (51%), Gaps = 11/179 (6%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA-IVIRAYYYTTVVGDPEQQ 59
           M     ++++F+DG N++ + +  G+  D R++L+ F      +I A++YT +       
Sbjct: 1   MKISMNRLSIFVDGNNMFYAQQKNGWFFDPRRVLEYFNKPEVKLINAFWYTGLKDP---- 56

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLVI 118
                   D L   G+ V  K+ KE+ ++  GR   K+++D+E+ VD F   +  + +V+
Sbjct: 57  -QDQRGFRDALISLGYTVRTKILKEYYDDVSGRYSQKANLDIEIVVDMFNTVDQYDEVVL 115

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
           FSGDG F   +  L+ K   +T+VST      M + +LR   D ++DL  ++ +I +  
Sbjct: 116 FSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDQYVDLNDIRYQIEKAE 170


>gi|15605762|ref|NP_213139.1| hypothetical protein aq_200 [Aquifex aeolicus VF5]
 gi|2982933|gb|AAC06550.1| hypothetical protein aq_200 [Aquifex aeolicus VF5]
          Length = 208

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 45/179 (25%), Positives = 78/179 (43%), Gaps = 17/179 (9%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVG--------DP 56
            E++ +FIDG+NL+   + L   +DY KL++  R    ++RAY+YT V            
Sbjct: 2   NERLMIFIDGSNLFHGIRYLNIKVDYSKLVEFLREGRYLVRAYFYTAVPQEKDIKKGTPE 61

Query: 57  EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LE 114
                     LD L + G +V     ++       + ++  +D+ LA D    +     +
Sbjct: 62  WDSLQRQKRFLDELSFMGIKVKTAHLRKLPSG---EYLEKEVDIMLATDMLSLAYRNAYD 118

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
             V+ SGD  F   V A+Q   K+V   +   +    +S  LR+  D F+ L    ++I
Sbjct: 119 TAVLVSGDSDFIHTVEAVQSLGKRVENATFKKT----SSYNLRKVCDRFILLDDHLDKI 173


>gi|16332216|ref|NP_442944.1| hypothetical protein slr0755 [Synechocystis sp. PCC 6803]
 gi|1653846|dbj|BAA18756.1| slr0755 [Synechocystis sp. PCC 6803]
          Length = 185

 Score =  131 bits (330), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 47/174 (27%), Positives = 91/174 (52%), Gaps = 12/174 (6%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA--IVIRAYYYTTVVGDPEQQFSP 62
           R+++++F+DG N++ + +  G+  D R++L  F       ++ A++YT +          
Sbjct: 11  RDRLSIFVDGNNMFYAQQKNGWFFDPRRVLSFFTEDPSVKLVNAFWYTGLKDT-----QD 65

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
                D L   G+ V  K+ KE+ ++  G+   K+++D+E+ VD F   +  + +V+FSG
Sbjct: 66  QRGFRDALISLGYTVRTKILKEYYDDISGKYSQKANLDIEIVVDMFNTVDQYDRVVLFSG 125

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
           DG F   +  L+ K   +T+VST      M + +LR   D ++DL  ++  I +
Sbjct: 126 DGDFERAIELLRSKSTHITVVST----EGMIARELRNATDRYIDLNDIRPAIEK 175


>gi|260778792|ref|ZP_05887684.1| hypothetical protein VIC_004198 [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260604956|gb|EEX31251.1| hypothetical protein VIC_004198 [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 160

 Score =  131 bits (329), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 39/166 (23%), Positives = 68/166 (40%), Gaps = 15/166 (9%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            EK+A+F+D  N+Y +++     + DY +          V  A+ Y     DP       
Sbjct: 1   MEKVAIFVDVQNIYYTTREKYRANFDYNEFWYVATEGRDVTEAHAYAIASHDP-----KQ 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
                 L   GF V  K   +  +       K   DV +A+D +E +  ++ +++ SGDG
Sbjct: 56  RQFHHILRGIGFNVKLKPFIQRQDGSA----KGDWDVGIALDVYEAASKVDRVILLSGDG 111

Query: 124 CFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
            F  LV  +Q +   KV +       P +++  L    D F+ +  
Sbjct: 112 DFDVLVKRVQERFGTKVDVF----GVPGLSAQSLIDVCDKFIPIEE 153


>gi|320450466|ref|YP_004202562.1| hypothetical protein TSC_c13940 [Thermus scotoductus SA-01]
 gi|320150635|gb|ADW22013.1| hypothetical protein TSC_c13940 [Thermus scotoductus SA-01]
          Length = 178

 Score =  131 bits (329), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 74/181 (40%), Gaps = 10/181 (5%)

Query: 3   DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            P +++ +F+D  NLY S++     ++++  LL+       ++RA  Y          + 
Sbjct: 6   HPDQRVGVFVDTQNLYHSARDYYERNVNFESLLRFAVGGRRLVRATAYVVEKEGDTSAW- 64

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFT-ENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
              P +  L   G++V             G+   + + D+ +A D       L+ +V+ S
Sbjct: 65  ---PFIYKLSTIGYRVRRMYLTVKELGEGGKPIYEGNWDMGIAADMVRLMPHLDVVVLGS 121

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F  ++  L  +  +V +++         + +L    D F+ L  + N      + +
Sbjct: 122 GDGDFVEILEVLMERGIRVEVIAF----RETTAQKLIDAVDRFVHLPDIPNAFMEPKNTE 177

Query: 181 K 181
           +
Sbjct: 178 R 178


>gi|170719838|ref|YP_001747526.1| hypothetical protein PputW619_0652 [Pseudomonas putida W619]
 gi|169757841|gb|ACA71157.1| protein of unknown function DUF88 [Pseudomonas putida W619]
          Length = 159

 Score =  131 bits (329), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 41/165 (24%), Positives = 67/165 (40%), Gaps = 15/165 (9%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            +KIALF D  NLY + + A G   +Y  L         ++ A  Y    GD     S  
Sbjct: 1   MKKIALFADVQNLYYTVRQAHGCHFNYTALWSEVSREGEIVEAVAYAIDRGD-----SKQ 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
                 L   GF V  K   + ++       K   DV + +D  + +  ++ +V+ SGDG
Sbjct: 56  QQFQQILRNLGFDVRLKPFIQRSDGSA----KGDWDVGITLDVIDAASRVDQVVLASGDG 111

Query: 124 CFTTLVAA-LQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
            F  L+   +QR   +    + V   P + +  L R A  ++ + 
Sbjct: 112 DFDLLLERVIQRHGAE----AVVYGVPGLTAMSLIRAASRYVPIE 152


>gi|170077971|ref|YP_001734609.1| hypothetical protein SYNPCC7002_A1357 [Synechococcus sp. PCC 7002]
 gi|169885640|gb|ACA99353.1| Protein of unknown function (PF01936) [Synechococcus sp. PCC 7002]
          Length = 172

 Score =  131 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 49/180 (27%), Positives = 92/180 (51%), Gaps = 12/180 (6%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA--IVIRAYYYTTVVGDPEQ 58
           M   + ++++F+DG N++ + +   +  D R++L  F       +I A++YT +     +
Sbjct: 1   MNFYQRRLSIFVDGNNMFYAQQKNNWFFDPRRVLDYFTCDPTVRLINAFWYTGL-----K 55

Query: 59  QFSPLHPLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLV 117
                    D L   G+ V  K+ KE+ ++  GR   K+++D+E+ VD F   +  + ++
Sbjct: 56  DSQDQRGFRDALISLGYTVRTKILKEYYDDVSGRYSQKANLDIEIVVDMFNTVDQYDQVI 115

Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
           +FSGDG F   +  L+ K   +T+VST      M + +LR   D ++DL  L+ EI +  
Sbjct: 116 LFSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDCYIDLNNLRAEIEKTE 171


>gi|146308745|ref|YP_001189210.1| hypothetical protein Pmen_3730 [Pseudomonas mendocina ymp]
 gi|145576946|gb|ABP86478.1| protein of unknown function DUF88 [Pseudomonas mendocina ymp]
          Length = 159

 Score =  131 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 41/164 (25%), Positives = 68/164 (41%), Gaps = 14/164 (8%)

Query: 5   REKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            +KIA+F D  NLY + +   G   DY  L      R ++  AY Y    GD +QQ    
Sbjct: 1   MKKIAVFADVQNLYYTVRQVHGCHFDYSVLWAEVSRRGVIAEAYAYAIDRGDAKQQQ--- 57

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
                 L   GF V  K   +  +       K   DV + +D  +  E ++ +V+ SGDG
Sbjct: 58  --FQQILRKLGFTVKLKPYIQRADGSA----KGDWDVGITIDVLDALERVDEIVLASGDG 111

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
            F  L+  ++ +     + +     P + +  L R A  ++ + 
Sbjct: 112 DFDLLLERVRSRG----VEAIAFGVPGLTAQSLIRAASLYVPIE 151


>gi|86146656|ref|ZP_01064977.1| hypothetical protein MED222_07105 [Vibrio sp. MED222]
 gi|218676438|ref|YP_002395257.1| hypothetical protein VS_II0673 [Vibrio splendidus LGP32]
 gi|85835503|gb|EAQ53640.1| hypothetical protein MED222_07105 [Vibrio sp. MED222]
 gi|218324706|emb|CAV26328.1| Conserved hypothetical protein [Vibrio splendidus LGP32]
          Length = 157

 Score =  131 bits (329), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 40/166 (24%), Positives = 66/166 (39%), Gaps = 15/166 (9%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            E IA+ +D  N+Y +++     + DY +          V+ A  Y     DP       
Sbjct: 1   MENIAILVDVQNVYYTTRDKYRSNFDYNQFWYVATEGRNVVEANAYAISSQDP-----KQ 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
                 L   GF V  K   +  +       K   DV +A+DA E +E ++ +V+ SGDG
Sbjct: 56  RQFHHILRGVGFNVKLKPFIQRRDGSA----KGDWDVGIALDAIELAETVDTIVLVSGDG 111

Query: 124 CFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
            F  LV  ++ +  K V +       P + +  L   A  F+ +  
Sbjct: 112 DFEILVERIKERFGKPVEV----YGVPGLTAQNLIDSASKFVPIEK 153


>gi|26991450|ref|NP_746875.1| hypothetical protein PP_4769 [Pseudomonas putida KT2440]
 gi|148549846|ref|YP_001269948.1| hypothetical protein Pput_4644 [Pseudomonas putida F1]
 gi|24986525|gb|AAN70339.1|AE016675_9 conserved hypothetical protein [Pseudomonas putida KT2440]
 gi|148513904|gb|ABQ80764.1| protein of unknown function DUF88 [Pseudomonas putida F1]
          Length = 159

 Score =  130 bits (328), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 41/165 (24%), Positives = 68/165 (41%), Gaps = 15/165 (9%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            +KIALF D  NLY + + A G   +Y  L         ++ A  Y    GD     S  
Sbjct: 1   MKKIALFADVQNLYYTVRQAHGCHFNYTALWADVSREGQIVEAVAYAIDRGD-----SKQ 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
                 L   GF+V  K   + ++       K   DV + +D  + +  ++ +V+ SGDG
Sbjct: 56  QQFQQILRNLGFEVRLKPFIQRSDGSA----KGDWDVGITLDVIDAASRVDQVVLASGDG 111

Query: 124 CFTTLVAA-LQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
            F  L+   +QR   +    + V   P + +  L R A  ++ + 
Sbjct: 112 DFDLLLERVIQRHGTE----AVVYGVPGLTALSLIRAATRYVPIE 152


>gi|311106775|ref|YP_003979628.1| hypothetical protein AXYL_03593 [Achromobacter xylosoxidans A8]
 gi|310761464|gb|ADP16913.1| hypothetical protein AXYL_03593 [Achromobacter xylosoxidans A8]
          Length = 576

 Score =  130 bits (328), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 44/187 (23%), Positives = 68/187 (36%), Gaps = 25/187 (13%)

Query: 1   MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
           M  P E +  ALF D  N+    +   +   D R +L+    +  ++    Y        
Sbjct: 1   MNTPNENVSMALFCDFENVALGVRDTKYQKFDIRPVLERLLLKGSIVVKKAYC------- 53

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114
             +         +H   F+++            R+  K+S D+ L VDA +       + 
Sbjct: 54  -DWERYKEFKAPMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDFCYTKSHVN 105

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
             VI SGD  F+ LV+ L+   KKV  V          SD L    D F+    L  E  
Sbjct: 106 TFVIISGDSDFSPLVSKLRENNKKVIGV----GVKQSTSDLLIANCDEFIFYDDLAREGQ 161

Query: 175 RDPDEDK 181
           R  D  +
Sbjct: 162 RAADARR 168


>gi|254481697|ref|ZP_05094940.1| conserved hypothetical protein [marine gamma proteobacterium
           HTCC2148]
 gi|214037826|gb|EEB78490.1| conserved hypothetical protein [marine gamma proteobacterium
           HTCC2148]
          Length = 200

 Score =  130 bits (328), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 42/163 (25%), Positives = 72/163 (44%), Gaps = 13/163 (7%)

Query: 6   EKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
           EKI +F+D  N+Y + +   G + DY K          ++ AY Y T  GD     +   
Sbjct: 44  EKITIFVDVQNIYYTCRQTYGRNFDYNKFWAEVTQNRELVGAYAYATDRGD-----AKQM 98

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
                LH  GF V  K   +  +       K+  D+ +A+D +E ++  + +V+ +GDG 
Sbjct: 99  QFQSILHAIGFTVKLKPVLKRRDGS----TKADWDIGIALDVYEAAQQCDTVVLLTGDGD 154

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
           F  L+  ++R   +      V   P++ SD L   A  F+ + 
Sbjct: 155 FGLLLDRIKR---RFDTNCEVYGVPALTSDILISAASRFVPID 194


>gi|163783881|ref|ZP_02178857.1| hypothetical protein HG1285_05285 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159880844|gb|EDP74372.1| hypothetical protein HG1285_05285 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 174

 Score =  130 bits (328), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 45/176 (25%), Positives = 81/176 (46%), Gaps = 14/176 (7%)

Query: 3   DPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
              +++A+F+D  NLY S++      +D+ K+L    +   +IRA  Y   +   +Q   
Sbjct: 6   YKNQRVAVFLDVQNLYYSARDVFNRKVDFEKVLFKILNGRQLIRALAYIIKLQGVDQ--- 62

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFT----ENCGRKRVKSSMDVELAVDAFEQSEGLEHLV 117
                +  L + G+++  K  K +     E      +K+  D+ +A+DA   +E ++  V
Sbjct: 63  --KGFISSLKHIGYEIKEKEPKIYKRLDEEGNLITTIKADWDMGIAMDAISIAEKIDVAV 120

Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
           + +GDG F  LV  L  K  KV I +   +     + +L    D F+DL +   EI
Sbjct: 121 LTTGDGDFADLVKYLHTKGVKVEIAAFKQT----TAKELIEVCDEFIDLTHFGEEI 172


>gi|193782651|ref|NP_435936.2| hypothetical protein SMa1264 [Sinorhizobium meliloti 1021]
 gi|46403700|gb|AAS92906.1| hypothetical protein [Sinorhizobium meliloti]
 gi|193073107|gb|AAK65348.2| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
          Length = 177

 Score =  130 bits (328), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 70/133 (52%), Positives = 99/133 (74%), Gaps = 2/133 (1%)

Query: 47  YYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA 106
            YY  +V D  Q+   +  L+DWL YNG+Q+V K  +EFT+  GR+R+K +MD++LA+DA
Sbjct: 30  NYYAPLVED--QETPTIRLLIDWLDYNGYQMVTKPIREFTDTLGRRRIKGNMDIDLAIDA 87

Query: 107 FEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
            E ++  +HLVIFSGDG FT++VAALQRK  +VT+VST+ + P M S +LRR+AD+F+DL
Sbjct: 88  IELAKTADHLVIFSGDGNFTSVVAALQRKGCRVTVVSTMATRPPMISGELRREADHFIDL 147

Query: 167 AYLKNEIARDPDE 179
           A L+ EIAR+  E
Sbjct: 148 AKLRGEIAREHAE 160


>gi|294139934|ref|YP_003555912.1| hypothetical protein SVI_1163 [Shewanella violacea DSS12]
 gi|293326403|dbj|BAJ01134.1| conserved hypothetical protein [Shewanella violacea DSS12]
          Length = 159

 Score =  130 bits (328), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 40/165 (24%), Positives = 75/165 (45%), Gaps = 13/165 (7%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            +KIA+F+D  N+Y + + A G   +YRKL +       ++ A  Y    GD  Q     
Sbjct: 3   NKKIAIFVDVQNIYYTCRQAYGRQFNYRKLWQHIIHEGDIVSATAYAIHKGDDGQ----- 57

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
               D L + GF +  K   + ++       K   DV +A+D  E +  ++ +++ SGDG
Sbjct: 58  LKFQDALKHIGFDIKLKPFIQRSDGSA----KGDWDVGIAIDVMEAATEVDTIILLSGDG 113

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
            F  L+  + +   K  + + V   P++ +  L   +  F+++  
Sbjct: 114 DFDLLMLKVYQ---KYGVDTQVYGVPALTAKSLIDASCKFIEIDE 155


>gi|82703323|ref|YP_412889.1| hypothetical protein Nmul_A2205 [Nitrosospira multiformis ATCC
           25196]
 gi|82411388|gb|ABB75497.1| Protein of unknown function DUF88 [Nitrosospira multiformis ATCC
           25196]
          Length = 381

 Score =  130 bits (328), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 41/185 (22%), Positives = 68/185 (36%), Gaps = 25/185 (13%)

Query: 1   MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
           M   +E +  A+F D  N+    +   +   D + +L+    +  ++    Y        
Sbjct: 1   MATLQENVSMAVFCDFENVALGVRDAKYEKFDIKPVLERLLLKGSIVIKKAYC------- 53

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114
             +         LH   F+++            R+  K+S D+ L VDA +       + 
Sbjct: 54  -DWDRYKTFKTALHEANFELIEIPHI-------RQSGKNSADIRLVVDALDLCYTKSHVN 105

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
             VI SGD  F+ LV+ L+   K+V  V          SD L    D F+    L  EI 
Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKQVIGV----GVKKSTSDLLIANCDEFIFYDDLVREIQ 161

Query: 175 RDPDE 179
           R   +
Sbjct: 162 RTAAK 166


>gi|170725723|ref|YP_001759749.1| hypothetical protein Swoo_1362 [Shewanella woodyi ATCC 51908]
 gi|169811070|gb|ACA85654.1| protein of unknown function DUF88 [Shewanella woodyi ATCC 51908]
          Length = 157

 Score =  130 bits (327), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 13/165 (7%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            +KIALF+D  N+Y + + A G   +YRKL +       ++ A  Y    GD  Q     
Sbjct: 1   MKKIALFVDVQNIYYTCRQAHGRQFNYRKLWQHISHEGEIVSATAYAIHKGDDGQ----- 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
               D L + GF V  K   +  +       K   DV + +D  E +  ++ +++ SGDG
Sbjct: 56  LKFQDALKHIGFDVKLKPFIQRADGSA----KGDWDVGITIDIMEAASEVDSIILLSGDG 111

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
            F  L+  + +   K  I + V   P + +  L   A  + ++  
Sbjct: 112 DFDLLMLKIYQ---KYGIETQVYGVPGLTAKSLIDSAAKYHEIDD 153


>gi|325283309|ref|YP_004255850.1| hypothetical protein Deipr_1081 [Deinococcus proteolyticus MRP]
 gi|324315118|gb|ADY26233.1| Domain of unknown function DUF88 [Deinococcus proteolyticus MRP]
          Length = 186

 Score =  130 bits (327), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 45/178 (25%), Positives = 79/178 (44%), Gaps = 10/178 (5%)

Query: 4   PREKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
           P+ ++ +FID  NLY S++ L    +++  LL A      ++ A  YT    +     S 
Sbjct: 6   PKPRVGIFIDTQNLYHSARDLLERTVNFETLLHAGADGRELVHAIAYTVERENE----ST 61

Query: 63  LHPLLDWLHYNGFQVVAKVA-KEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
             P +  L   G++V        FT + GR   + + D+ +  D     + L+ +V+ SG
Sbjct: 62  ARPFIYKLSTLGYKVRRMNLTLHFTSDSGRPIYEGNWDMGMVADMVRLMDHLDIVVLGSG 121

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
           DG FT +V  LQ + K+V +++         + +L   AD F  L  L   +     +
Sbjct: 122 DGDFTDIVEVLQERGKRVEVLAF----REHTAQKLIDAADKFTHLPDLSGALMPARRK 175


>gi|148977299|ref|ZP_01813913.1| hypothetical protein VSWAT3_11922 [Vibrionales bacterium SWAT-3]
 gi|145963412|gb|EDK28676.1| hypothetical protein VSWAT3_11922 [Vibrionales bacterium SWAT-3]
          Length = 157

 Score =  130 bits (327), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 43/166 (25%), Positives = 68/166 (40%), Gaps = 15/166 (9%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            E IA+ +D  N+Y +++     + DY +          V+ A+ Y     DP       
Sbjct: 1   MENIAILVDVQNVYYTTRDKYRSNFDYNQFWYVATEGRNVVAAHAYAISSQDP-----KQ 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
                 L   GF V  K   +  +       K   DV +A+DA E +E ++ +V+ SGDG
Sbjct: 56  RQFHHILRGVGFDVKLKPFIQRRDGSA----KGDWDVGIALDAIELAENVDTIVLVSGDG 111

Query: 124 CFTTLVAAL-QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
            F  LV  + QR  KKV +       P + +  L   A  F+ +  
Sbjct: 112 DFEILVERIKQRFGKKVEV----YGVPGLTAQNLIDSASKFVPIEK 153


>gi|307824132|ref|ZP_07654359.1| protein of unknown function DUF88 [Methylobacter tundripaludum
           SV96]
 gi|307734916|gb|EFO05766.1| protein of unknown function DUF88 [Methylobacter tundripaludum
           SV96]
          Length = 157

 Score =  130 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 38/165 (23%), Positives = 70/165 (42%), Gaps = 13/165 (7%)

Query: 5   REKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            EK+A+F+D  N+Y ++K       +Y        +   VI A+ Y    GD +QQ    
Sbjct: 1   MEKVAIFVDVQNIYYTTKQSYRRHFNYTAFWSQATADREVIAAFAYAIDKGDCKQQ---- 56

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
                 L   GF+V  K   + ++       K   DV + +DA + +  ++ +++ SGDG
Sbjct: 57  -GFQQVLRNIGFEVKLKPYIQRSDGSA----KGDWDVGITLDAIDYAAKVDVIILLSGDG 111

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
            F  L+   +       + + V   P++ +  L   A  F+ +  
Sbjct: 112 DFDLLLDKARNI---YGVTTEVYGVPALTAPSLINSAGRFIAIDD 153


>gi|84393278|ref|ZP_00992039.1| hypothetical protein V12B01_14530 [Vibrio splendidus 12B01]
 gi|84376103|gb|EAP92990.1| hypothetical protein V12B01_14530 [Vibrio splendidus 12B01]
          Length = 157

 Score =  130 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 40/166 (24%), Positives = 66/166 (39%), Gaps = 15/166 (9%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            E IA+ +D  N+Y +++     + DY +          V+ A  Y     DP       
Sbjct: 1   MENIAILVDVQNVYYTTRDKYRSNFDYNQFWYVATEGRNVVAANAYAISSQDP-----KQ 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
                 L   GF V  K   +  +       K   DV +A+DA E +E ++ +V+ SGDG
Sbjct: 56  RQFHHILRGVGFNVKLKPFIQRRDGSA----KGDWDVGIALDAIELAETVDTIVLVSGDG 111

Query: 124 CFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
            F  LV  ++ +  K V +       P + +  L   A  F+ +  
Sbjct: 112 DFEILVERIKERFGKPVEV----YGVPGLTAQNLIDSASKFVPIEK 153


>gi|71278570|ref|YP_266902.1| hypothetical protein CPS_0134 [Colwellia psychrerythraea 34H]
 gi|71144310|gb|AAZ24783.1| conserved hypothetical protein [Colwellia psychrerythraea 34H]
          Length = 157

 Score =  130 bits (326), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 37/165 (22%), Positives = 71/165 (43%), Gaps = 13/165 (7%)

Query: 5   REKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            +KIA+F+D  N+Y +++       +YR L +   ++  +  A  Y     D +Q     
Sbjct: 1   MKKIAVFVDVQNIYYTTRDTYAKQFNYRLLWQELMAQGEITIANAYAIQRSDDQQ----- 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
           H     L + GF V  K   + ++       K   DV + +D  E +  ++ +++ SGDG
Sbjct: 56  HKFQKALKHIGFDVKLKPYIQRSDGSA----KGDWDVGITIDIMEAAAEVDTVILLSGDG 111

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
            F  L+  ++    K  + + V S   + +  L   AD    + +
Sbjct: 112 DFDLLLRKVRE---KYGVSTEVYSVEKLTAKSLVEAADIHHKIEH 153


>gi|225850534|ref|YP_002730768.1| RtsE [Persephonella marina EX-H1]
 gi|225645811|gb|ACO03997.1| RtsE [Persephonella marina EX-H1]
          Length = 179

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 14/177 (7%)

Query: 2   FDPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
               +++A+F+D  NLY S++ +    +++  +L    +  +++RA  Y   +   +Q  
Sbjct: 10  LYKNQRVAVFLDIQNLYYSARDSFNRKVNFESVLDKVLNGRVLVRAIAYLVKLQGVDQ-- 67

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFT----ENCGRKRVKSSMDVELAVDAFEQSEGLEHL 116
                 ++ L + G+QV  K  K F            +K+  D+ +A+DA   +E ++  
Sbjct: 68  ---KGFINTLKHIGYQVRVKEPKIFKRLDEYGNLWTTIKADWDMGIAMDAISLAEKIDVA 124

Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
           V+ SGDG F  LV  L  K  KV I +   +    A+ +L   AD F+DL     E+
Sbjct: 125 VLASGDGDFADLVRYLHTKGVKVEIAAFKQT----AAKELIEVADEFIDLTAFGEEV 177


>gi|149911940|ref|ZP_01900538.1| hypothetical protein PE36_11027 [Moritella sp. PE36]
 gi|149804987|gb|EDM65016.1| hypothetical protein PE36_11027 [Moritella sp. PE36]
          Length = 157

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 42/163 (25%), Positives = 77/163 (47%), Gaps = 13/163 (7%)

Query: 5   REKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            +KIA+F+D  N+Y +++   G   +YRKL +    +  V+ AY Y    GD +Q     
Sbjct: 1   MQKIAVFVDVQNIYYTTRQTYGRQFNYRKLWQHLLLQGDVVTAYAYAIDKGDDQQ----- 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
               D L + GF V  K   + ++       K   DV + +D  + +E ++ +V+ SGDG
Sbjct: 56  RKFQDALKHIGFDVKLKPFIQRSDGSA----KGDWDVGITIDVLQVAESVDTVVLLSGDG 111

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
            F  L+  ++    +  + + V   P++ ++ L   A  F  +
Sbjct: 112 DFAILLDTIKA---RHQVRAEVYGVPALTANALINSATVFNPI 151


>gi|86608534|ref|YP_477296.1| hypothetical protein CYB_1055 [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86557076|gb|ABD02033.1| conserved hypothetical protein [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 382

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 43/163 (26%), Positives = 72/163 (44%), Gaps = 12/163 (7%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
           PR+ + +FID ANL+AS++  G  +DY  LL         +  + Y+ V           
Sbjct: 211 PRKALGVFIDAANLHASAQQWGSHLDYPSLLSWLAQGRSEMEVHVYSGVDR----HNLAQ 266

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
              L  L   G++VV K      +       K+++D EL VD        E +++ SGDG
Sbjct: 267 RRFLRELRKQGYRVVTKPVVIHADGS----RKANLDGELIVDLMALHSHYETVLLLSGDG 322

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
            F   +  ++R+  ++ + +         +  L R AD F+DL
Sbjct: 323 DFVPALKHIRRQGCRLEVAA----YRPNTNPALIRIADQFVDL 361


>gi|157374400|ref|YP_001473000.1| hypothetical protein Ssed_1261 [Shewanella sediminis HAW-EB3]
 gi|157316774|gb|ABV35872.1| protein of unknown function DUF88 [Shewanella sediminis HAW-EB3]
          Length = 159

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 13/164 (7%)

Query: 6   EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
           +KIA+F+D  N+Y + + A G   +YRKL +       +  A  Y    GD  Q      
Sbjct: 4   KKIAIFVDVQNIYYTCRQAYGRQFNYRKLWQHINHEGEISSATAYAIHRGDDGQ-----L 58

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
              D L + GF V  K   + ++       K   DV + +D  E +  ++ +++ SGDG 
Sbjct: 59  KFQDALKHIGFDVKLKPFIQRSDGSA----KGDWDVGITIDIMEAASEVDSIILLSGDGD 114

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
           F  L+  + +   K  I + V   P++ +  L   A  + ++  
Sbjct: 115 FGLLMLKIHQ---KYGIDTQVYGVPTLTAKSLIDSACQYHEIDD 155


>gi|330820543|ref|YP_004349405.1| hypothetical protein bgla_2g14470 [Burkholderia gladioli BSR3]
 gi|327372538|gb|AEA63893.1| hypothetical protein bgla_2g14470 [Burkholderia gladioli BSR3]
          Length = 525

 Score =  129 bits (325), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 41/187 (21%), Positives = 72/187 (38%), Gaps = 25/187 (13%)

Query: 1   MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
           M  P++ +  ALF D  N+    +   F   D + +L+    +  ++    Y        
Sbjct: 1   MALPQDSVNMALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC------- 53

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114
             +         +H   F+++            R+  K+S D+ L VDA +       ++
Sbjct: 54  -DWDRYKTFKGAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVD 105

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
             VI SGD  F+ LV+ L+   K+V  V       +  SD L    D F+    L  E+ 
Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKRVIGV----GVKNSTSDLLVANCDEFIFYDDLARELQ 161

Query: 175 RDPDEDK 181
           R   + +
Sbjct: 162 RAQAKRE 168


>gi|217970117|ref|YP_002355351.1| hypothetical protein Tmz1t_1700 [Thauera sp. MZ1T]
 gi|217507444|gb|ACK54455.1| protein of unknown function DUF88 [Thauera sp. MZ1T]
          Length = 564

 Score =  129 bits (325), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 69/187 (36%), Gaps = 25/187 (13%)

Query: 1   MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
           M    + I  ALF D  N+    +   +   D +++L+    +  ++    Y        
Sbjct: 1   MASSPDSISMALFCDFENVALGVRDAKYEKFDIKRVLERLLLKGSIVVKKAYC------- 53

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114
             +         +H   F+++            R+  K+S D+ L VDA +       ++
Sbjct: 54  -DWDRYKSFKAAMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVD 105

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
             VI SGD  F+ LV+ L+   K+V  V          SD L    D F+    L  +  
Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKQVIGV----GVKQSTSDLLIANCDEFIFYDDLVRDSQ 161

Query: 175 RDPDEDK 181
           R   + +
Sbjct: 162 RAAAKRE 168


>gi|325271797|ref|ZP_08138266.1| hypothetical protein G1E_03075 [Pseudomonas sp. TJI-51]
 gi|324103068|gb|EGC00446.1| hypothetical protein G1E_03075 [Pseudomonas sp. TJI-51]
          Length = 159

 Score =  129 bits (324), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 41/165 (24%), Positives = 67/165 (40%), Gaps = 15/165 (9%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            +KIALF D  NLY + + A G   +Y  L         ++ A  Y    GD     S  
Sbjct: 1   MKKIALFADVQNLYYTVRQAHGCHFNYTALWADVCREGQIVEAVAYAIDRGD-----SKQ 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
                 L   GF V  K   + ++       K   DV + +D  + +  ++ +V+ SGDG
Sbjct: 56  QQFQQILRNLGFDVRLKPFIQRSDGSA----KGDWDVGITLDVIDAASRVDQVVLASGDG 111

Query: 124 CFTTLVAA-LQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
            F  L+   +QR   +    + V   P + +  L R A  ++ + 
Sbjct: 112 DFDLLLERVIQRHGTE----AVVYGVPGLTALSLIRAASRYVPIE 152


>gi|269967719|ref|ZP_06181767.1| hypothetical protein VMC_31970 [Vibrio alginolyticus 40B]
 gi|269827625|gb|EEZ81911.1| hypothetical protein VMC_31970 [Vibrio alginolyticus 40B]
          Length = 162

 Score =  128 bits (323), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 15/168 (8%)

Query: 3   DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
           + ++KIA+ +D  N+Y + + A   + DY +          V+ A  Y     DP     
Sbjct: 4   ESKQKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATQGKEVVSARAYAIASNDP----- 58

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
                   L   GF+V+ K   +  +       K   DV + +DA E +  +E +++ SG
Sbjct: 59  KQRQFHHILRGVGFEVMLKPYIQRRDGS----SKGDWDVGITLDAIEIAPEVEEVILVSG 114

Query: 122 DGCFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
           DG F+ LV  +Q++  K VT+       P + S  L   AD F+ +  
Sbjct: 115 DGDFSLLVERIQQRFNKTVTV----YGVPKLTSQTLIDCADNFVAIDD 158


>gi|195953366|ref|YP_002121656.1| protein of unknown function DUF88 [Hydrogenobaculum sp. Y04AAS1]
 gi|195932978|gb|ACG57678.1| protein of unknown function DUF88 [Hydrogenobaculum sp. Y04AAS1]
          Length = 195

 Score =  128 bits (323), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 46/184 (25%), Positives = 85/184 (46%), Gaps = 15/184 (8%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE------Q 58
           +EK+ +FIDG+N++   K   F +DY KL++       ++RAY+Y+ +  D +      +
Sbjct: 3   KEKLVIFIDGSNVFHGLKNETFRLDYLKLIEFLTGDRYLVRAYFYSALPSDKDVDKQSKE 62

Query: 59  QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHL 116
            F+     L+ L + G +V     ++  +      ++  +D+ LA D    +     +  
Sbjct: 63  GFNKQKKFLEDLAFMGIKVKLAKLRKLPDGN---FLEKEVDIMLATDMLSLAYKNAYDSC 119

Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
           V+ SGD  F+  V A+Q   K+V   +   +    +S  LRR  D F+ L    ++    
Sbjct: 120 VLVSGDSDFSYTVEAVQFLGKRVENATFKKT----SSYSLRRLCDKFIYLDDHLDKFLLK 175

Query: 177 PDED 180
           P E 
Sbjct: 176 PKEP 179


>gi|153832763|ref|ZP_01985430.1| protein of unknown function [Vibrio harveyi HY01]
 gi|156976905|ref|YP_001447811.1| hypothetical protein VIBHAR_05689 [Vibrio harveyi ATCC BAA-1116]
 gi|148870897|gb|EDL69787.1| protein of unknown function [Vibrio harveyi HY01]
 gi|156528499|gb|ABU73584.1| hypothetical protein VIBHAR_05689 [Vibrio harveyi ATCC BAA-1116]
          Length = 162

 Score =  128 bits (323), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 15/168 (8%)

Query: 3   DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
           + ++KIA+ +D  N+Y + + A   + DY +          V+ A  Y     DP     
Sbjct: 4   ESKQKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATQGKEVVSARAYAIASNDP----- 58

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
                   L   GF+V+ K   +  +       K   DV + +DA E +  ++ +++ SG
Sbjct: 59  KQRQFHHILRGVGFEVMLKPYIQRRDGSA----KGDWDVGITLDAIEIAPEVDEVILVSG 114

Query: 122 DGCFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
           DG F+ LV  +Q++  KKVT+       P + S  L   AD F+ +  
Sbjct: 115 DGDFSLLVERIQQRFNKKVTV----YGVPKLTSQTLIDCADNFVAVDE 158


>gi|91201953|emb|CAJ75013.1| conserved hypothetical protein [Candidatus Kuenenia
           stuttgartiensis]
          Length = 177

 Score =  128 bits (323), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 40/167 (23%), Positives = 71/167 (42%), Gaps = 14/167 (8%)

Query: 3   DPREKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
           +  ++I +F+D  N++ S+KAL    IDY KLL        ++RA  Y     D +Q   
Sbjct: 8   NSPQRIGVFVDVQNMFYSAKALHQSKIDYSKLLLEIVGGRNLVRAIAYIVQKPDVDQSS- 66

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
                 D L   G+++  K  +   +       K   D+ +A+D    +  L+ +V+ +G
Sbjct: 67  ----FTDALCRLGYEIKTKDLRLRPDGTA----KGDWDMGIAIDTISIASKLDTVVLVTG 118

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
           DG F  LV  L+    +V  VS         + +L   +  +  +  
Sbjct: 119 DGDFVPLVELLKYHGCRVETVSF----RRSTAIELINVSTKYTAIEE 161


>gi|313500724|gb|ADR62090.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
          Length = 159

 Score =  128 bits (323), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 41/165 (24%), Positives = 67/165 (40%), Gaps = 15/165 (9%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            +KIALF D  NLY + + A G   +Y  L         ++ A  Y    GD     S  
Sbjct: 1   MKKIALFADVQNLYYTVRQAHGCHFNYTALWADVSREGQIVEAVAYAIDRGD-----SKQ 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
                 L   GF V  K   + ++       K   DV + +D  + +  ++ +V+ SGDG
Sbjct: 56  QQFQQILRNLGFDVRLKPFIQRSDGSA----KGDWDVGITLDVIDAASRVDQVVLASGDG 111

Query: 124 CFTTLVAA-LQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
            F  L+   +QR   +    + V   P + +  L R A  ++ + 
Sbjct: 112 DFDLLLERVIQRHGTE----AVVYGVPGLTALSLIRAATRYVPIE 152


>gi|297566075|ref|YP_003685047.1| hypothetical protein Mesil_1654 [Meiothermus silvanus DSM 9946]
 gi|296850524|gb|ADH63539.1| protein of unknown function DUF88 [Meiothermus silvanus DSM 9946]
          Length = 195

 Score =  128 bits (323), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 41/173 (23%), Positives = 77/173 (44%), Gaps = 12/173 (6%)

Query: 2   FDPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           + P +++ LF+D  NLY S++     ++++  LLK   S   ++RA  Y          +
Sbjct: 14  YSPMQRVGLFVDTQNLYHSARDYYEKNVNFESLLKHAVSGRQLVRATAYVVEREGDTSAW 73

Query: 61  SPLHPLLDWLHYNGFQVVAK--VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVI 118
               P +  L   G++V       KE T+  G+   + + D+ +A D       L+ +V+
Sbjct: 74  ----PFIYKLSTIGYRVRRMNLTLKETTDE-GKPIYEGNWDMGIAADMVRLMHTLDVVVL 128

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
            SGDG F  ++  L  +  +V +V+         S +L    D F+ L  + +
Sbjct: 129 GSGDGDFVDIIEVLMERGIRVEVVAF----KETTSQRLIDAVDRFVHLPEIPD 177


>gi|330446321|ref|ZP_08309973.1| putative uncharacterized protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328490512|dbj|GAA04470.1| putative uncharacterized protein [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 159

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 38/165 (23%), Positives = 66/165 (40%), Gaps = 13/165 (7%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            EK+A+F+D  N+Y + +     + DY            +I AY Y    GD        
Sbjct: 1   MEKVAIFVDVQNIYYTVREKYHANFDYNAFWSEVSQDREIIAAYAYAIHKGD-----EKQ 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
               + L   GF V  K   + ++       K   DV + +D  E +  ++ +++ SGDG
Sbjct: 56  RQFQNILRAIGFDVKLKPFIQRSDGSA----KGDWDVGITLDVIEHAPEVDRIILLSGDG 111

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
            F  LV  +Q    K   +  V   P + +  L   A ++ ++  
Sbjct: 112 DFDLLVEKVQT---KYNAIVEVYGVPGLTAASLINSATHYREIED 153


>gi|332139998|ref|YP_004425736.1| hypothetical protein MADE_1002950 [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327550020|gb|AEA96738.1| hypothetical protein MADE_1002950 [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 156

 Score =  128 bits (322), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 39/164 (23%), Positives = 73/164 (44%), Gaps = 14/164 (8%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            +K  L +D  N+Y + + A   + +Y +  +       +  A+ Y    GD     S  
Sbjct: 1   MKKALLLVDVQNVYYTCRQAYKRNFNYNRFWRELSYNLDIEHAFAYAIDKGD-----SKQ 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
               + L   GF+V  K   +  +       K   DV + VDA E +  ++ +++ SGDG
Sbjct: 56  REFQNILRAIGFEVKLKPFIQRADGSA----KGDWDVGITVDALEHASQVDEIILVSGDG 111

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
            F  LV AL+ K K VT+       P++ ++ +++ A  ++ + 
Sbjct: 112 DFDILVNALKEKGKTVTV----YGVPALTAESIQKVATRYVPIN 151


>gi|209528287|ref|ZP_03276748.1| protein of unknown function DUF88 [Arthrospira maxima CS-328]
 gi|284053607|ref|ZP_06383817.1| hypothetical protein AplaP_19301 [Arthrospira platensis str.
           Paraca]
 gi|209491273|gb|EDZ91667.1| protein of unknown function DUF88 [Arthrospira maxima CS-328]
 gi|291565674|dbj|BAI87946.1| hypothetical protein [Arthrospira platensis NIES-39]
          Length = 173

 Score =  128 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 51/179 (28%), Positives = 95/179 (53%), Gaps = 13/179 (7%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA---IVIRAYYYTTVVGDPE 57
           M + R ++++F+DG N++ + +  G+  D R++L  F+      I I A++YT +     
Sbjct: 1   MPNLRNRLSIFVDGNNMFYAQQKNGWFFDPRRVLDYFKHEQADLIFINAFWYTGLKDP-- 58

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHL 116
                     D L   G+ V  K+ KE+  ++ GR   K+++D+E+ VD F   +  + +
Sbjct: 59  ---QDQRGFRDALISLGYTVRTKILKEYYDDSSGRYSQKANLDIEIVVDMFNTVDQYDRV 115

Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
           V+FSGDG F   +  L+ K   +T+VST      M + +LR   D ++DL  ++++I +
Sbjct: 116 VLFSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDQIEK 170


>gi|254421306|ref|ZP_05035024.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
 gi|196188795|gb|EDX83759.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
          Length = 328

 Score =  128 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 56/173 (32%), Positives = 89/173 (51%), Gaps = 12/173 (6%)

Query: 3   DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
              + I +FIDG+NL+ ++  L  ++DYR+LL +      ++RAY+YT V    E+Q   
Sbjct: 168 QSNDLITIFIDGSNLFYAASHLNIEVDYRRLLTSLVRGRRLLRAYFYTGVDPQNEKQ--- 224

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
               L WL+ +G +VV+K      +       K++M VE+AVD    SE   ++ +  GD
Sbjct: 225 -RGFLLWLNRHGHRVVSKELTNLPDGS----RKANMHVEMAVDMMRISEYCSNITLLGGD 279

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
           G     +  L ++   + +VS      SM SD L   AD + DLA L++ I R
Sbjct: 280 GNLAYALQVLSQRGTFIEVVS----LQSMTSDSLIDIADSYTDLADLRDRIKR 328


>gi|56477068|ref|YP_158657.1| hypothetical protein ebA2897 [Aromatoleum aromaticum EbN1]
 gi|56313111|emb|CAI07756.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
          Length = 510

 Score =  128 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 41/186 (22%), Positives = 68/186 (36%), Gaps = 25/186 (13%)

Query: 1   MFDPRE--KIALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
           M  P E   +ALF D  N+    +   +   D +++L+    +  ++    Y        
Sbjct: 1   MASPHETASMALFCDFENVALGVRDANYEKFDIKRVLERLLLKGSIVVKKAYC------- 53

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114
             +         +H   F+++            R+  K+S D+ L VDA +       + 
Sbjct: 54  -DWDRYKGFKATMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVN 105

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
             VI SGD  F+ LV+ L+   K+V  V          SD L    D F+    L  E  
Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKQVIGV----GVKQSTSDLLIANCDEFIFYDDLVRESQ 161

Query: 175 RDPDED 180
           R   + 
Sbjct: 162 RAAAKR 167


>gi|108805593|ref|YP_645530.1| hypothetical protein Rxyl_2805 [Rubrobacter xylanophilus DSM 9941]
 gi|108766836|gb|ABG05718.1| protein of unknown function DUF88 [Rubrobacter xylanophilus DSM
           9941]
          Length = 189

 Score =  128 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 48/186 (25%), Positives = 84/186 (45%), Gaps = 13/186 (6%)

Query: 1   MFD-PREKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58
           M +   E++A+F+DGANLY S K+  G  +DY +LL+A  +   ++RA +Y     + ++
Sbjct: 1   MENRSDERVAVFVDGANLYHSIKSYYGGVLDYGRLLEAAVAGRRLLRATFYLVEKQEADE 60

Query: 59  Q-FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRV----KSSMDVELAVDAFEQSEGL 113
           Q  S     +  L+  G++V +K                  K   DV + VD    ++  
Sbjct: 61  QVASSTRSFVYNLNRFGYKVRSKPLTVHETTTPGVERVVSHKGDWDVGIVVDMIRLADHA 120

Query: 114 EHLVIFSGDGCFTTLVAALQ-RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
           +  V+ SGDG +  +V  LQ  +  +V ++S         +  L    D + DL  + + 
Sbjct: 121 DTYVLVSGDGDYVEVVDYLQTERGLRVEVISAAQ----CTAQALFDVCDRYTDLGEIPDL 176

Query: 173 I-ARDP 177
              R P
Sbjct: 177 FRERGP 182


>gi|194333277|ref|YP_002015137.1| hypothetical protein Paes_0433 [Prosthecochloris aestuarii DSM 271]
 gi|194311095|gb|ACF45490.1| protein of unknown function DUF88 [Prosthecochloris aestuarii DSM
           271]
          Length = 294

 Score =  128 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 16/180 (8%)

Query: 1   MFDP-REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
           M D    K  +FIDGANL+ + + +G+ ID+ +L+  F      + A YY     +    
Sbjct: 1   MPDKGNRKAGVFIDGANLFFTQRHMGWQIDFSRLIAFFMQCFDSVEARYYV---PESGAL 57

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTE-NCGRKRVKSSMDVELAVDAFEQSEGLEHLVI 118
                     L  NG+ + +K  K+      G   +K ++DVEL VDA   +   +  ++
Sbjct: 58  SQEQVAFNRMLEANGYTITSKPVKKIVNKETGEVVMKGNLDVELVVDALTTASRYDSFIL 117

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQ----ADYFMDLAYLKNEIA 174
            SGD  F  L+ AL+ + K + + ST      +++ +L  +       F   + ++++I 
Sbjct: 118 VSGDSDFLPLIRALRSRGKDIQVYST----RGLSAWELVAEPGIGCHDF---SDIRSKIE 170


>gi|46199000|ref|YP_004667.1| hypothetical protein TTC0692 [Thermus thermophilus HB27]
 gi|46196624|gb|AAS81040.1| hypothetical conserved protein [Thermus thermophilus HB27]
          Length = 180

 Score =  128 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 73/182 (40%), Gaps = 11/182 (6%)

Query: 3   DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
              +++ +F+D  NLY S++     ++++  LL+       ++RA  Y          + 
Sbjct: 8   YQEQRVGVFVDTQNLYHSARDYYERNVNFESLLRFAVGGRRLVRATAYVVEKEGDTSAW- 66

Query: 62  PLHPLLDWLHYNGFQVVAKVA-KEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
              P +  L   G++V       + T   GR     + D+ +A D       L+ +V+ S
Sbjct: 67  ---PFIYKLSTIGYKVRRMYLTVKETGEGGRPIYSGNWDMGIAADMVRLMPYLDVVVLGS 123

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F  ++  L  +  +V +++         + +L    D F  L  +      +P   
Sbjct: 124 GDGDFVEILEVLMERGIRVEVIAF----RETTAQRLIDAVDRFTHLPEIPGAFM-EPRSP 178

Query: 181 KK 182
           ++
Sbjct: 179 ER 180


>gi|319959046|gb|ADV90687.1| LabA [Nostoc linckia EC102]
 gi|319959048|gb|ADV90688.1| LabA [Nostoc linckia EC105]
 gi|319959050|gb|ADV90689.1| LabA [Nostoc linckia EC106]
 gi|319959052|gb|ADV90690.1| LabA [Nostoc linckia EC109]
 gi|319959054|gb|ADV90691.1| LabA [Nostoc linckia EC113]
 gi|319959056|gb|ADV90692.1| LabA [Nostoc linckia EC119]
 gi|319959058|gb|ADV90693.1| LabA [Nostoc linckia EC121]
 gi|319959060|gb|ADV90694.1| LabA [Nostoc linckia EC205]
 gi|319959062|gb|ADV90695.1| LabA [Nostoc linckia EC206]
 gi|319959064|gb|ADV90696.1| LabA [Nostoc linckia EC220]
 gi|319959066|gb|ADV90697.1| LabA [Nostoc linckia EC221]
 gi|319959068|gb|ADV90698.1| LabA [Nostoc linckia EC222]
 gi|319959070|gb|ADV90699.1| LabA [Nostoc linckia EC326]
 gi|319959072|gb|ADV90700.1| LabA [Nostoc linckia NK217]
 gi|319959074|gb|ADV90701.1| LabA [Nostoc linckia EC501]
 gi|319959076|gb|ADV90702.1| LabA [Nostoc linckia EC505]
 gi|319959078|gb|ADV90703.1| LabA [Nostoc linckia EC519]
 gi|319959080|gb|ADV90704.1| LabA [Nostoc linckia EC521]
 gi|319959082|gb|ADV90705.1| LabA [Nostoc linckia EC602]
 gi|319959084|gb|ADV90706.1| LabA [Nostoc linckia EC724]
 gi|319959086|gb|ADV90707.1| LabA [Nostoc linckia EC204]
 gi|319959090|gb|ADV90709.1| LabA [Nostoc linckia EC210]
 gi|319959092|gb|ADV90710.1| LabA [Nostoc linckia EC322]
 gi|319959096|gb|ADV90712.1| LabA [Nostoc linckia NK207]
 gi|319959098|gb|ADV90713.1| LabA [Nostoc linckia EC703]
 gi|319959100|gb|ADV90714.1| LabA [Nostoc linckia EC720]
          Length = 173

 Score =  128 bits (321), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 49/157 (31%), Positives = 81/157 (51%), Gaps = 12/157 (7%)

Query: 23  ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVA 82
            LG +IDY KLL      + ++RA++YT V    E+Q       L W+  NG++V+AK  
Sbjct: 2   QLGIEIDYTKLLCRLTGGSRLLRAFFYTGVDRTNEKQ----QGFLLWMRRNGYRVIAKDL 57

Query: 83  KEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIV 142
            +  +       K+++DVE+AVD     +  +  V+ SGDG     V ++  +  +V +V
Sbjct: 58  VQLPDGS----KKANLDVEIAVDMMALVDSYDTAVLVSGDGDLAYAVNSVSYRGVRVEVV 113

Query: 143 STVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
           S      SM SD L   +D ++DL  +K +I + P +
Sbjct: 114 S----LRSMTSDSLINVSDRYIDLEAIKEDIQKTPRQ 146


>gi|257051312|ref|YP_003129145.1| protein of unknown function DUF88 [Halorhabdus utahensis DSM 12940]
 gi|256690075|gb|ACV10412.1| protein of unknown function DUF88 [Halorhabdus utahensis DSM 12940]
          Length = 165

 Score =  127 bits (320), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 42/172 (24%), Positives = 79/172 (45%), Gaps = 14/172 (8%)

Query: 3   DPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            P +++A+  D  NLY ++++    +IDY +LL A      + RA  Y       +++  
Sbjct: 5   HPGQRVAVLADSQNLYHTAQSLYQQNIDYGELLDAAVRDRQLTRAIAYVIRADADDEER- 63

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
                 D L   GF+  AK  K F +       K+  DV +++DA   +  ++ + + +G
Sbjct: 64  ----FFDALEDIGFETKAKDIKTFADGS----KKADWDVGMSLDAVTLAPHVDTIALCTG 115

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
           DG F  LV  ++ +  +V ++S   S     S++L   A+ + DL+      
Sbjct: 116 DGDFARLVTHVRHEGVRVEVLSFGES----TSEELLDVAEDYTDLSEDTERF 163


>gi|254507966|ref|ZP_05120094.1| conserved hypothetical protein [Vibrio parahaemolyticus 16]
 gi|219549074|gb|EED26071.1| conserved hypothetical protein [Vibrio parahaemolyticus 16]
          Length = 161

 Score =  127 bits (320), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 40/166 (24%), Positives = 68/166 (40%), Gaps = 15/166 (9%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            EKIA+F+D  N+Y +++     + DY +          V+ A  Y     DP       
Sbjct: 1   MEKIAIFVDVQNIYYTTRDKYRANFDYNEFWYLATEGKEVVEAKAYAIASTDP-----KQ 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
                 L   GF V  K   +  +       K   DV +A+D +E +  ++ +++ SGDG
Sbjct: 56  RQFHHILRGIGFDVKLKPYIQRADGS----TKGDWDVGIALDVYEAANKVDRVILLSGDG 111

Query: 124 CFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
            F  LV  +Q++   KV +     S P + +  L    D  + +  
Sbjct: 112 DFEILVERIQQRFGTKVDV----YSVPGLTAQALIDVCDKHIPIEE 153


>gi|167035773|ref|YP_001671004.1| hypothetical protein PputGB1_4782 [Pseudomonas putida GB-1]
 gi|166862261|gb|ABZ00669.1| protein of unknown function DUF88 [Pseudomonas putida GB-1]
          Length = 159

 Score =  127 bits (320), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 40/165 (24%), Positives = 67/165 (40%), Gaps = 15/165 (9%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            +KIALF D  NLY + + A G   +Y  L         ++ A  Y    GD     +  
Sbjct: 1   MKKIALFADVQNLYYTVRQAHGCHFNYTALWADVSREGQIVEAVAYAIDRGD-----AKQ 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
                 L   GF V  K   + ++       K   DV + +D  + +  ++ +V+ SGDG
Sbjct: 56  QQFQQILRNLGFDVRLKPFIQRSDGSA----KGDWDVGITLDVIDAASRVDQVVLASGDG 111

Query: 124 CFTTLVAA-LQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
            F  L+   +QR   +    + V   P + +  L R A  ++ + 
Sbjct: 112 DFDLLLERVIQRHGTE----AVVYGVPGLTALSLIRAATRYVPIE 152


>gi|218295524|ref|ZP_03496337.1| protein of unknown function DUF88 [Thermus aquaticus Y51MC23]
 gi|218244156|gb|EED10682.1| protein of unknown function DUF88 [Thermus aquaticus Y51MC23]
          Length = 179

 Score =  127 bits (320), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 75/181 (41%), Gaps = 10/181 (5%)

Query: 3   DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
              +++ +F+D  NLY S++     ++++  LL+       ++RA  Y          + 
Sbjct: 7   HQDQRVGVFVDTQNLYHSARDYYERNVNFESLLRFAVGGRRLVRATAYVVEKEGDTSAW- 65

Query: 62  PLHPLLDWLHYNGFQVVAKVA-KEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
              P +  L   G++V       + T   GR   + + D+ +A D       L+ +V+ S
Sbjct: 66  ---PFIYKLSTIGYRVRRMYLTVKETGEGGRPIYEGNWDMGIAADMVRLMPYLDVVVLGS 122

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F  ++  L  +  +V +++         + +L    D F+ L  + N      + +
Sbjct: 123 GDGDFVEILEVLMERGIRVEVIAF----RETTAQRLIDAVDRFVHLPEIPNPFMEPKNPE 178

Query: 181 K 181
           +
Sbjct: 179 R 179


>gi|90414813|ref|ZP_01222781.1| hypothetical protein P3TCK_17379 [Photobacterium profundum 3TCK]
 gi|90324118|gb|EAS40703.1| hypothetical protein P3TCK_17379 [Photobacterium profundum 3TCK]
          Length = 159

 Score =  127 bits (320), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 41/166 (24%), Positives = 69/166 (41%), Gaps = 15/166 (9%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            EK+A+F+D  N+Y + K     + DY            V+ AY Y    GD +Q     
Sbjct: 1   MEKVAIFVDVQNIYYTVKDKYKCNFDYNAFWAEATQGREVVAAYAYAIHRGDEKQGQ--- 57

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
               + L   GF+V  K   + ++       K   DV + +D  E +  ++ +++ SGDG
Sbjct: 58  --FQNILRGIGFEVKLKPFIQRSDGSA----KGDWDVGITLDVIEHAGDVDRVILLSGDG 111

Query: 124 CFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
            F  LV  +Q K    V +       P + +  L   A Y+ ++  
Sbjct: 112 DFDLLVDKVQTKYGVDVEV----YGVPGLTATSLINTAHYYREIES 153


>gi|332711770|ref|ZP_08431701.1| hypothetical protein LYNGBM3L_65720 [Lyngbya majuscula 3L]
 gi|332349748|gb|EGJ29357.1| hypothetical protein LYNGBM3L_65720 [Lyngbya majuscula 3L]
          Length = 165

 Score =  127 bits (320), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 48/169 (28%), Positives = 90/169 (53%), Gaps = 12/169 (7%)

Query: 10  LFIDGANLYASSKALGFDIDYRKLLKAFRS--RAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           +F+DG N++ + +  G+  D R++L  F++     ++ A++YT +               
Sbjct: 3   IFVDGNNMFYAQQKNGWFFDPRRVLDYFKNEPGITLVNAFWYTGLKDP-----QDQRGFR 57

Query: 68  DWLHYNGFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126
           D L   G+ V  K+ KE+  +N GR   K+++D+E+ VD F   E  + +++FSGDG F 
Sbjct: 58  DALISLGYTVRTKILKEYYDDNSGRYSQKANLDIEIVVDMFNTVEQYDKVILFSGDGDFE 117

Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
             +  L+ K   +T+VST      M + +LR   D ++DL  ++++I +
Sbjct: 118 RAIELLRSKNTHITVVST----EGMIARELRNATDRYIDLNDVRDQIEK 162


>gi|55981026|ref|YP_144323.1| hypothetical protein TTHA1057 [Thermus thermophilus HB8]
 gi|55772439|dbj|BAD70880.1| conserved hypothetical protein [Thermus thermophilus HB8]
          Length = 180

 Score =  127 bits (320), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 72/181 (39%), Gaps = 10/181 (5%)

Query: 3   DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
              +++ +F+D  NLY S++     ++++  LL+       ++RA  Y          + 
Sbjct: 8   YQEQRVGVFVDTQNLYHSARDYYERNVNFESLLRFAVGGRRLVRATAYVVEKEGDTSAW- 66

Query: 62  PLHPLLDWLHYNGFQVVAKVA-KEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
              P +  L   G++V       + T   GR     + D+ +A D       L+ +V+ S
Sbjct: 67  ---PFIYKLSTIGYKVRRMYLTVKETGEGGRPIYSGNWDMGIAADMVRLMPYLDVVVLGS 123

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F  ++  L  +  +V +++         + +L    D F  L  +        + +
Sbjct: 124 GDGDFVEILEVLMERGIRVEVIAF----RETTAQRLIDAVDRFTHLPEIPGAFMEPKNAE 179

Query: 181 K 181
           +
Sbjct: 180 R 180


>gi|171317829|ref|ZP_02907008.1| protein of unknown function DUF88 [Burkholderia ambifaria MEX-5]
 gi|171096994|gb|EDT41862.1| protein of unknown function DUF88 [Burkholderia ambifaria MEX-5]
          Length = 643

 Score =  127 bits (319), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 40/188 (21%), Positives = 70/188 (37%), Gaps = 25/188 (13%)

Query: 1   MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
           M  P + +  A+F D  N+    +   +   D + +L+    +  ++    Y        
Sbjct: 1   MALPLDNVSMAVFCDFENVALGVRDAKYEKFDIQPVLERLLLKGSIVVKKAYC------- 53

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114
             +         +H   F+++            R+  K+S D+ L VDA +       ++
Sbjct: 54  -DWERYKGFKASMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVD 105

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
             VI SGD  F+ LV+ L+   KKV  V          SD L    D F+    L  E  
Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKKVIGV----GVKKSTSDLLVANCDEFIFYDDLVREQQ 161

Query: 175 RDPDEDKK 182
           R   + ++
Sbjct: 162 RAQAKREQ 169


>gi|323492730|ref|ZP_08097874.1| hypothetical protein VIBR0546_00630 [Vibrio brasiliensis LMG 20546]
 gi|323313105|gb|EGA66225.1| hypothetical protein VIBR0546_00630 [Vibrio brasiliensis LMG 20546]
          Length = 160

 Score =  127 bits (319), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 41/166 (24%), Positives = 68/166 (40%), Gaps = 15/166 (9%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            EK+A+F+D  N+Y +++     + DY +          V+ A  Y     DP       
Sbjct: 1   MEKVAIFVDVQNIYYTTRDKYRANFDYNQFWYIATEGREVVSANAYAIASHDP-----KQ 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
                 L   GF V  K   +  +       K   DV LA+D FE +  ++ +++ SGDG
Sbjct: 56  RQFHHILRGIGFNVQLKPFIQRNDGSA----KGDWDVGLALDVFETASQVDRVILLSGDG 111

Query: 124 CFTTLVAALQ-RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
            F  LV  +Q R   KV +       P + +  L   A+ ++ +  
Sbjct: 112 DFDVLVDRIQSRFGTKVDVF----GVPGLTAQSLIDVANNYIPIDE 153


>gi|269962746|ref|ZP_06177088.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269832501|gb|EEZ86618.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 163

 Score =  127 bits (319), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 15/167 (8%)

Query: 4   PREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
            ++KIA+ +D  N+Y + + A   + DY +          V+ A  Y     DP      
Sbjct: 6   NKQKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATQGKEVVSARAYAIASNDP-----K 60

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
                  L   GF+V+ K   +  +       K   DV + +DA E +  ++ +++ SGD
Sbjct: 61  QRQFHHILRGVGFEVMLKPYIQRRDGSA----KGDWDVGITLDAIEIAPEVDEVILVSGD 116

Query: 123 GCFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
           G F+ LV  +Q++  KKVT+       P + S  L   AD+F+ +  
Sbjct: 117 GDFSLLVERIQQRFNKKVTV----YGVPRLTSQTLIDCADHFVAVDD 159


>gi|254428823|ref|ZP_05042530.1| conserved hypothetical protein [Alcanivorax sp. DG881]
 gi|196194992|gb|EDX89951.1| conserved hypothetical protein [Alcanivorax sp. DG881]
          Length = 157

 Score =  127 bits (319), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 40/165 (24%), Positives = 70/165 (42%), Gaps = 15/165 (9%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            + + + +D  N+Y +++ A     DY +      +   V++A  Y    GD        
Sbjct: 1   MKTVLILVDVQNVYYTTRQAFNRRFDYNQFWSTVTAEGQVVKAIAYAIDRGD-----KKQ 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
               + L   GF+V  K   + ++       K   DV +A+DA E +  ++ +V+ SGDG
Sbjct: 56  REFQNILRAIGFEVKLKPFIQRSDGSA----KGDWDVGIAIDALEYAAEVDSVVLVSGDG 111

Query: 124 CFTTLVAALQ-RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
            F  LV  L+  K K V +         + +D L R A  F+ + 
Sbjct: 112 DFDLLVDKLRVDKGKHVDV----YGVAPLTADSLARAASRFVPIE 152


>gi|115351126|ref|YP_772965.1| hypothetical protein Bamb_1072 [Burkholderia ambifaria AMMD]
 gi|115281114|gb|ABI86631.1| protein of unknown function DUF88 [Burkholderia ambifaria AMMD]
          Length = 507

 Score =  127 bits (318), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 40/188 (21%), Positives = 70/188 (37%), Gaps = 25/188 (13%)

Query: 1   MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
           M  P + +  A+F D  N+    +   +   D + +L+    +  ++    Y        
Sbjct: 1   MALPLDNVSMAVFCDFENVALGVRDAKYEKFDIQPVLERLLLKGSIVVKKAYC------- 53

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114
             +         +H   F+++            R+  K+S D+ L VDA +       ++
Sbjct: 54  -DWERYKGFKASMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVD 105

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
             VI SGD  F+ LV+ L+   KKV  V          SD L    D F+    L  E  
Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKKVIGV----GVKKSTSDLLVANCDEFIFYDDLVREQQ 161

Query: 175 RDPDEDKK 182
           R   + ++
Sbjct: 162 RAQAKREQ 169


>gi|88796999|ref|ZP_01112589.1| hypothetical protein MED297_19237 [Reinekea sp. MED297]
 gi|88779868|gb|EAR11053.1| hypothetical protein MED297_19237 [Reinekea sp. MED297]
          Length = 159

 Score =  127 bits (318), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 37/163 (22%), Positives = 69/163 (42%), Gaps = 15/163 (9%)

Query: 8   IALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           +A+ +D  N+Y +++ A   + DY +       +  ++ A  Y    GD           
Sbjct: 4   VAILVDVQNVYYTTRHAFRRNFDYNRFWAQVSEQGTIVLANAYAVDRGD-----EKQKQF 58

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126
            + L   GF V  K   +  +       K   DV + +DA + ++  + +V+ +GDG FT
Sbjct: 59  QNILRAIGFNVKLKPFIQRADGSA----KGDWDVGITIDALDAAQLADTVVLVTGDGDFT 114

Query: 127 TLVAALQ-RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
            LV  L+    ++V +       PS+ +  L   AD F+ +  
Sbjct: 115 ILVDKLRNDLDRRVEV----YGVPSLTAKSLMDAADAFIPIDD 153


>gi|89092681|ref|ZP_01165634.1| hypothetical protein MED92_15283 [Oceanospirillum sp. MED92]
 gi|89083193|gb|EAR62412.1| hypothetical protein MED92_15283 [Oceanospirillum sp. MED92]
          Length = 160

 Score =  127 bits (318), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 40/163 (24%), Positives = 74/163 (45%), Gaps = 13/163 (7%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
             KIA+F+D  N+Y +++ A G   +YRK  +A  ++  ++ A  Y     D  Q     
Sbjct: 1   MTKIAIFVDVQNIYYTTRQAFGGSFNYRKFWQAISTQGEIVEANAYAIERADDGQ----- 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
               D L + GF V  K   +  +       K   DV + +D  EQ+  ++ +++ SGDG
Sbjct: 56  KKFQDALRHIGFNVKLKPFIQRKDGTA----KGDWDVGITIDVLEQAAHVDKVILLSGDG 111

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
            F  L+  ++   K   + + V S  ++ +  L    D++  +
Sbjct: 112 DFDLLLKKIRSTYK---VTTEVYSIEALTAKSLISATDHYHSI 151


>gi|91224643|ref|ZP_01259904.1| hypothetical protein V12G01_07878 [Vibrio alginolyticus 12G01]
 gi|91190531|gb|EAS76799.1| hypothetical protein V12G01_07878 [Vibrio alginolyticus 12G01]
          Length = 162

 Score =  127 bits (318), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 42/167 (25%), Positives = 71/167 (42%), Gaps = 13/167 (7%)

Query: 3   DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
           + ++KIA+ +D  N+Y + + A   + DY +          V+ A  Y     DP     
Sbjct: 4   ESKQKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATQGKEVVSARAYAIASNDP----- 58

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
                   L   GF+V+ K   +  +       K   DV + +DA E +  +E +++ SG
Sbjct: 59  KQRQFHHILRGVGFEVMLKPYIQRRDGS----SKGDWDVGITLDAIEIAPEVEEVILVSG 114

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
           DG F+ LV  +Q++        TV   P + S  L   AD F+ +  
Sbjct: 115 DGDFSLLVERIQQRFNNTV---TVYGVPKLTSQTLIDCADNFVAIDD 158


>gi|90408478|ref|ZP_01216637.1| hypothetical protein PCNPT3_03246 [Psychromonas sp. CNPT3]
 gi|90310410|gb|EAS38536.1| hypothetical protein PCNPT3_03246 [Psychromonas sp. CNPT3]
          Length = 157

 Score =  127 bits (318), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 13/163 (7%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            +KIA+F D  N+Y +S+ A     +YRKL +  + +  +  A+ Y    GD +QQ    
Sbjct: 1   MKKIAIFADVQNIYYTSRDAYKKSFNYRKLWQQIKEQGDICYAFAYAIDKGDRQQQK--- 57

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
               D L + GF++  K   +  +       K   DV + +D  + +  ++ +++ SGDG
Sbjct: 58  --FQDVLRHLGFEIKLKPYIQRCDGSA----KGDWDVGITIDIMQIAPRVDCIILLSGDG 111

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
            F  L+  + ++ K   + + V   P   +  L      F  +
Sbjct: 112 DFAILLETVNKRDK---VETQVYGVPKYTAKALIDSCSVFNPI 151


>gi|291295060|ref|YP_003506458.1| hypothetical protein Mrub_0671 [Meiothermus ruber DSM 1279]
 gi|290470019|gb|ADD27438.1| protein of unknown function DUF88 [Meiothermus ruber DSM 1279]
          Length = 192

 Score =  127 bits (318), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 42/182 (23%), Positives = 84/182 (46%), Gaps = 14/182 (7%)

Query: 4   PREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
           P++++ LF+D  NLY S++   G ++++  L++   +   ++RA  Y          +  
Sbjct: 13  PQQRVGLFVDTQNLYHSARDYYGQNVNFESLMRYAVANRQLVRATAYVVEREHDTSAW-- 70

Query: 63  LHPLLDWLHYNGFQVVAK--VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
             P +  L   GF+V       KE T+  G+   + + D+ +A D       L+ +V+ S
Sbjct: 71  --PFIYKLSTIGFRVRRMNLTLKETTDE-GKPIYEGNWDMGIAADMVRLMHTLDVVVLGS 127

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F  +V  L  +  +V +++         S +L    D F+ L  ++N     P ++
Sbjct: 128 GDGDFVDIVEVLMERGIRVEVIAF----KETTSQKLIDAVDRFIHLPEIENAF--VPSKE 181

Query: 181 KK 182
           ++
Sbjct: 182 RE 183


>gi|323497755|ref|ZP_08102770.1| hypothetical protein VISI1226_04395 [Vibrio sinaloensis DSM 21326]
 gi|323317231|gb|EGA70227.1| hypothetical protein VISI1226_04395 [Vibrio sinaloensis DSM 21326]
          Length = 160

 Score =  127 bits (318), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 40/166 (24%), Positives = 70/166 (42%), Gaps = 15/166 (9%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            EKIA+F+D  N+Y +++     + DY +          V+ A  Y     DP       
Sbjct: 1   MEKIAIFVDVQNIYYTTRDKYRANFDYNQFWYVATEGQQVVSASAYAIASTDP-----KQ 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
                 L   GF V  K   + ++       K   DV +A+D +E +  ++ +++ SGDG
Sbjct: 56  RQFHHILRGIGFDVKLKPYIQRSDGS----TKGDWDVGIALDVYELASQVDRVILLSGDG 111

Query: 124 CFTTLVAALQRKVK-KVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
            F  LV  +Q++   KV +     + P + +  L    D F+ +  
Sbjct: 112 DFEMLVTRIQQRFATKVDV----YAVPGLTAQNLIDVCDKFIPIDE 153


>gi|220934364|ref|YP_002513263.1| protein of unknown function DUF88 [Thioalkalivibrio sp. HL-EbGR7]
 gi|219995674|gb|ACL72276.1| protein of unknown function DUF88 [Thioalkalivibrio sp. HL-EbGR7]
          Length = 275

 Score =  127 bits (318), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 42/188 (22%), Positives = 69/188 (36%), Gaps = 25/188 (13%)

Query: 1   MFDPRE--KIALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
           M  P E   +ALF D  N+    +   +   D  K+L+    +  ++    Y        
Sbjct: 1   MPSPAEIRNMALFCDFENIALGVREAKYPKFDIGKVLERLLLKGNIVVRKAYC------- 53

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114
             +         +H   F+++            R+  K+S D+ + VDA +       ++
Sbjct: 54  -DWDRYKEFKAPMHEAAFELIEIPHV-------RQSGKNSADIRMVVDALDLCYTKGHVD 105

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
             V+ SGD  F+ LVA L+   K V  V          SD L    D F+    L  E A
Sbjct: 106 AFVVISGDSDFSPLVAKLRENNKLVIGV----GVKKSTSDLLTAACDEFIYYDDLVREAA 161

Query: 175 RDPDEDKK 182
               + +K
Sbjct: 162 HKKRKPRK 169


>gi|262395374|ref|YP_003287227.1| hypothetical protein VEA_000074 [Vibrio sp. Ex25]
 gi|262338968|gb|ACY52762.1| hypothetical protein VEA_000074 [Vibrio sp. Ex25]
          Length = 162

 Score =  127 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 15/168 (8%)

Query: 3   DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
           + ++KIA+ +D  N+Y + + A   + DY +          V+ A  Y     DP     
Sbjct: 4   ERKQKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATQGKEVVSARAYAIASNDP----- 58

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
                   L   GF+V+ K   +  +       K   DV + +DA E +  +E +++ SG
Sbjct: 59  KQRQFHHILRGVGFEVMLKPYIQRRDGS----SKGDWDVGITLDAIEIAPEVEEVILVSG 114

Query: 122 DGCFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
           DG F+ LV  +Q++  K VT+       P + S  L   AD F+ +  
Sbjct: 115 DGDFSLLVERIQQRFNKTVTV----YGVPKLTSQTLIDCADNFVAIDD 158


>gi|54308491|ref|YP_129511.1| hypothetical protein PBPRA1298 [Photobacterium profundum SS9]
 gi|46912920|emb|CAG19709.1| conserved hypothetical protein [Photobacterium profundum SS9]
          Length = 159

 Score =  127 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 41/166 (24%), Positives = 69/166 (41%), Gaps = 15/166 (9%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            EK+A+F+D  N+Y + K     + DY            V+ AY Y    GD +Q     
Sbjct: 1   MEKVAIFVDVQNIYYTVKDKYKCNFDYNAFWAEATQGREVVAAYAYAIHRGDEKQGQ--- 57

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
               + L   GF+V  K   + ++       K   DV + +D  E +  ++ +++ SGDG
Sbjct: 58  --FQNILRGIGFEVKLKPFIQRSDGSA----KGDWDVGITLDVIEHAADVDRVILLSGDG 111

Query: 124 CFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
            F  LV  +Q K    V +       P + +  L   A Y+ ++  
Sbjct: 112 DFDLLVDKVQTKYGVDVEV----YGVPGLTATSLINTAHYYREIES 153


>gi|298246249|ref|ZP_06970055.1| protein of unknown function DUF88 [Ktedonobacter racemifer DSM
           44963]
 gi|297553730|gb|EFH87595.1| protein of unknown function DUF88 [Ktedonobacter racemifer DSM
           44963]
          Length = 933

 Score =  127 bits (318), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 40/172 (23%), Positives = 75/172 (43%), Gaps = 14/172 (8%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
           F   E++ +F+D ANL  S++ L   +D+ KLL   R    ++RA  Y         Q  
Sbjct: 771 FPSTERVGVFVDVANLLYSARTLRMSVDFGKLLDFLRGNRRLVRAQAYC----PTSPQAG 826

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIF 119
                L  +   G+++  K  K F+        K+ +D++L +D         ++ +V+ 
Sbjct: 827 DEQMFLQAVKGLGYRITTKNYKTFSSGA----KKADLDLDLCMDVVRLVEGRAVDCIVLV 882

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
           SGD  F  ++        +V + +   +     S  LR+  D F++L+ L+ 
Sbjct: 883 SGDSDFMPMLDYCSDHGVRVEVAAFDEAM----SATLRQSCDLFVNLSLLEE 930


>gi|328950408|ref|YP_004367743.1| Domain of unknown function DUF88 [Marinithermus hydrothermalis DSM
           14884]
 gi|328450732|gb|AEB11633.1| Domain of unknown function DUF88 [Marinithermus hydrothermalis DSM
           14884]
          Length = 186

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 72/171 (42%), Gaps = 10/171 (5%)

Query: 3   DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            P +++ +F+D  NLY S++      +++  LL    +   ++RA  Y          + 
Sbjct: 8   HPTQRVGVFVDTQNLYHSARDYYERTVNFASLLNYAVAGRQLVRATAYVVERDGDTSAW- 66

Query: 62  PLHPLLDWLHYNGFQVVAKVAK-EFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
              P +  L   G++V     +   T + G+   + + D+ +A D       L+ +V+ S
Sbjct: 67  ---PFIYKLSTIGYRVRRMTLQLHHTTDDGKPIYEGNWDMGIAADMVRLMHTLDVVVLGS 123

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
           GDG F  ++  L  +  +V +V+         + +L    D F  L  + +
Sbjct: 124 GDGDFVEILEVLMERGIRVEVVAF----KETTAQKLIDAVDKFTHLPDIPD 170


>gi|134282577|ref|ZP_01769281.1| conserved hypothetical protein [Burkholderia pseudomallei 305]
 gi|134246134|gb|EBA46224.1| conserved hypothetical protein [Burkholderia pseudomallei 305]
          Length = 622

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 41/182 (22%), Positives = 69/182 (37%), Gaps = 25/182 (13%)

Query: 1   MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
           M  P++ +  ALF D  N+    +   F   D + +L+    +  ++    Y        
Sbjct: 144 MALPQDSVNMALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC------- 196

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLE 114
             +         +H   F+++            R+  K+S D+ L VDA +       ++
Sbjct: 197 -DWDRYKTFKAAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVD 248

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
             VI SGD  F+ LV+ L+   K+V  V       +  SD L    D F+    L  E  
Sbjct: 249 TFVIISGDSDFSPLVSKLRENAKRVIGV----GVKNSTSDLLVANCDEFIFYDDLAREQQ 304

Query: 175 RD 176
           R 
Sbjct: 305 RA 306


>gi|209694823|ref|YP_002262751.1| hypothetical protein VSAL_I1288 [Aliivibrio salmonicida LFI1238]
 gi|208008774|emb|CAQ78973.1| conserved hypothetical protein [Aliivibrio salmonicida LFI1238]
          Length = 157

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 41/165 (24%), Positives = 66/165 (40%), Gaps = 15/165 (9%)

Query: 5   REKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            + +A+ +D  N+Y +++       DY  L         V+ A  Y     D        
Sbjct: 1   MKTVAILVDVQNIYYTTRDVYQRHFDYNALWAKVTDGRKVVGANAYAIARSDD-----KQ 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
               + L   GF V  K   +  +       K   DV +A+DA E +E  + +VI SGDG
Sbjct: 56  KQFHNILRGIGFDVKLKPFIQRRDGSA----KGDWDVGIALDAIELAEQADIVVILSGDG 111

Query: 124 CFTTLVAALQ-RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
            F  LV  +Q R  K+V +         + ++ L   AD F+ + 
Sbjct: 112 DFELLVQRIQSRFNKEVEV----YGVADLTANALIDAADRFIPIE 152


>gi|289548415|ref|YP_003473403.1| hypothetical protein Thal_0643 [Thermocrinis albus DSM 14484]
 gi|289182032|gb|ADC89276.1| protein of unknown function DUF88 [Thermocrinis albus DSM 14484]
          Length = 196

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 17/179 (9%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS--- 61
            E++ +FIDG+NL+ + + L   IDY KL++  R    ++RAY+Y  V  + + + +   
Sbjct: 1   MERVVIFIDGSNLFHAIRYLNIKIDYSKLVEFLREDRKLVRAYFYGAVPQERDVKRNTPE 60

Query: 62  -----PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LE 114
                     L+ L   G +V     ++       + ++  +D+ LA D    +     +
Sbjct: 61  WESLLRQRRFLEELSLMGIKVKTAPLRKLPTG---EYLEKEVDIMLATDMLSMAYMNVYD 117

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
             ++ SGD  F+  V  +QR  K+V   S   +    +S  LR+  D F+ L    +  
Sbjct: 118 TAILVSGDSDFSYTVEEVQRIGKRVENASFRKT----SSYLLRKICDRFILLDDYVDRF 172


>gi|163803423|ref|ZP_02197297.1| hypothetical protein 1103602000421_AND4_08566 [Vibrio sp. AND4]
 gi|159172772|gb|EDP57618.1| hypothetical protein AND4_08566 [Vibrio sp. AND4]
          Length = 162

 Score =  126 bits (317), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 15/168 (8%)

Query: 3   DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
           + ++KIA+ +D  N+Y + + A   + DY +      +   V  A  Y     DP     
Sbjct: 4   ESKQKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATNGKEVASARAYAIASNDP----- 58

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
                   L   GF+V+ K   +  +       K   DV + +DA E +  ++ +++ SG
Sbjct: 59  KQRQFHHILRGVGFEVMLKPYIQRRDGSA----KGDWDVGITLDAIEAAAEVDEIILVSG 114

Query: 122 DGCFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
           DG F+ LV  +Q++  KKVT+       P + S  L   AD F+ +  
Sbjct: 115 DGDFSMLVERIQQRFNKKVTV----YGVPKLTSQNLIDCADNFVAIDE 158


>gi|221633438|ref|YP_002522663.1| hypothetical protein trd_1460 [Thermomicrobium roseum DSM 5159]
 gi|221157206|gb|ACM06333.1| Protein of unknown function superfamily [Thermomicrobium roseum DSM
           5159]
          Length = 198

 Score =  126 bits (316), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 57/185 (30%), Positives = 95/185 (51%), Gaps = 16/185 (8%)

Query: 1   MFDPRE--KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58
           M  P +  ++A+F D +NLY  ++ LG  IDY +LL+   +   ++ AY Y T+ G+   
Sbjct: 1   MVLPNQIDRVAVFFDMSNLYFVARDLGVRIDYARLLEFLVAGRRLVCAYAYVTLAGEE-- 58

Query: 59  QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVI 118
             S   P L WL  NGF+VV +  +  ++   R      +D+E+AVD   Q+  ++ +V+
Sbjct: 59  --SSAVPFLTWLRRNGFRVVTRTLRRGSDGALR----GDLDLEMAVDVLLQTPHVDVIVL 112

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA--RD 176
            +GDG +  LV  +QR  ++V I S     P   + +L   ADY++DL       +  R 
Sbjct: 113 VTGDGEYCYLVETVQRLGRRVEIAS----APRNTAVELMELADYYVDLEVNLRHFSQPRP 168

Query: 177 PDEDK 181
           P   +
Sbjct: 169 PAAGR 173


>gi|197335397|ref|YP_002155926.1| hypothetical protein VFMJ11_1205 [Vibrio fischeri MJ11]
 gi|197316887|gb|ACH66334.1| conserved hypothetical protein [Vibrio fischeri MJ11]
          Length = 157

 Score =  126 bits (316), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 38/166 (22%), Positives = 65/166 (39%), Gaps = 15/166 (9%)

Query: 5   REKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            + +A+ +D  N+Y +++       DY  L         V+ A  Y     D        
Sbjct: 1   MKTVAILVDVQNIYYTTRDVYQRHFDYNALWAKVTEGRTVVGANAYAIARSDD-----KQ 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
               + L   GF V  K   +  +       K   DV + +DA E +E  + +V+ SGDG
Sbjct: 56  KQFHNILRGIGFDVKLKPFIQRRDGSA----KGDWDVGITLDAIELAEQADIVVLLSGDG 111

Query: 124 CFTTLVAALQ-RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
            F  L+  +Q R  K+V +         + ++ L   AD F+ +  
Sbjct: 112 DFDLLIKRIQSRFNKEVEV----YGVADLTANSLIDAADRFIPIED 153


>gi|319959094|gb|ADV90711.1| LabA [Nostoc linckia NK105]
          Length = 160

 Score =  126 bits (316), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 49/157 (31%), Positives = 81/157 (51%), Gaps = 12/157 (7%)

Query: 23  ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVA 82
            LG +IDY KLL      + ++RA++YT V    E+Q       L W+  NG++V+AK  
Sbjct: 2   QLGIEIDYTKLLCRLTGGSRLLRAFFYTGVDRTNEKQ----QGFLLWMRRNGYRVIAKDL 57

Query: 83  KEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIV 142
            +  +       K+++DVE+AVD     +  +  V+ SGDG     V ++  +  +V +V
Sbjct: 58  VQLPDGS----KKANLDVEIAVDMMALVDSYDTAVLVSGDGDLAYAVNSVSYRGVRVEVV 113

Query: 143 STVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
           S      SM SD L   +D ++DL  +K +I + P +
Sbjct: 114 S----LRSMTSDSLINVSDRYLDLEAIKEDIQKTPRQ 146


>gi|15806586|ref|NP_295301.1| hypothetical protein DR_1578 [Deinococcus radiodurans R1]
 gi|6459341|gb|AAF11139.1|AE002001_5 conserved hypothetical protein [Deinococcus radiodurans R1]
          Length = 185

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 10/170 (5%)

Query: 4   PREKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
            R ++ +FID  NLY S++ L    +++  +L+       ++ A  YT            
Sbjct: 6   HRPRVGVFIDTQNLYHSARDLLERTVNFETILQVATEGRELVHAISYTVEREGEATS--- 62

Query: 63  LHPLLDWLHYNGFQVVAKVA-KEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
             P +  L   GF+V           + G+   + + D+ +  D F   + L+ +V+ SG
Sbjct: 63  -RPFIYKLSTLGFKVRRMNLTLHHVTDGGKPIYEGNWDMGIVADMFRLMDHLDVIVLGSG 121

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
           DG FT +V  LQ + K+V +++         + +L   AD F  L  ++ 
Sbjct: 122 DGDFTDIVEVLQERGKRVEVIAF----REHTAQKLIDAADRFTHLPDIEE 167


>gi|77360859|ref|YP_340434.1| hypothetical protein PSHAa1927 [Pseudoalteromonas haloplanktis
           TAC125]
 gi|76875770|emb|CAI86991.1| conserved protein of unknown function [Pseudoalteromonas
           haloplanktis TAC125]
          Length = 167

 Score =  125 bits (315), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 72/167 (43%), Gaps = 13/167 (7%)

Query: 3   DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
           + + ++ +F+D  N+Y + + + G + DY    +    +  +  A+ Y    GD +Q   
Sbjct: 9   NTKPRVGIFVDVQNIYYTCRESYGKNFDYNAFWRVMAQQYNIECAFAYAIYRGDEKQSQ- 67

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
                 + L   GF+V  K   +  +       K   DV + +D  E  + L+ +++ SG
Sbjct: 68  ----FQNILRAIGFEVKLKPFIQRRDGSA----KGDWDVGITIDMLEHGKNLDKVILLSG 119

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
           DG F  L+  L+    +  +   V     + ++ L++ A+ F  +  
Sbjct: 120 DGDFALLLGHLKS---QYNVSCDVYGADRLTAEALKQSAEQFHLIDN 163


>gi|89072963|ref|ZP_01159510.1| hypothetical protein SKA34_12125 [Photobacterium sp. SKA34]
 gi|90578998|ref|ZP_01234808.1| hypothetical protein VAS14_04813 [Vibrio angustum S14]
 gi|89051181|gb|EAR56637.1| hypothetical protein SKA34_12125 [Photobacterium sp. SKA34]
 gi|90439831|gb|EAS65012.1| hypothetical protein VAS14_04813 [Vibrio angustum S14]
          Length = 159

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 40/166 (24%), Positives = 68/166 (40%), Gaps = 15/166 (9%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            EK+A+F+D  N+Y + K     + DY            +I AY Y    GD        
Sbjct: 1   MEKVAIFVDVQNIYYTVKEKYRANFDYNAFWAEVSQDREIIAAYAYAIHKGD-----EKQ 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
               + L   GF+V  K   + ++       K   DV + +D  E ++  + +++ SGDG
Sbjct: 56  RQFQNILRAIGFEVKLKPFIQRSDGSA----KGDWDVGITLDVIEHAQDADRIILLSGDG 111

Query: 124 CFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
            F  LV  +Q K   KV +       P + +  L   A ++ ++  
Sbjct: 112 DFDLLVDKVQTKYNTKVEV----YGVPGLTATSLINTATHYREIED 153


>gi|325294340|ref|YP_004280854.1| hypothetical protein Dester_0137 [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325064788|gb|ADY72795.1| hypothetical protein Dester_0137 [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 195

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 45/177 (25%), Positives = 87/177 (49%), Gaps = 13/177 (7%)

Query: 7   KIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
           ++A+F+D  N+Y  +K  L   +D+++LL+       + RA  Y   +    Q       
Sbjct: 17  RVAVFVDMQNIYYGAKNTLKKKVDFKRLLELGVRGRTLYRAIAYLVDLDKVNQDS----- 71

Query: 66  LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDG 123
            +  L   G++V  K  K+F  +  +   K+  D+ +A+DA   +E   ++ +V+ SGDG
Sbjct: 72  FIYVLRSLGYEVKLKEPKKF-YSWDKIEYKADWDMGIAIDAIAMAENGKIDVVVLMSGDG 130

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
            F  L+  L+ K  KV ++S      S+ + +L   A+ ++DL  + + I  +  E+
Sbjct: 131 DFVDLINFLKAKGIKVEVISF----RSITAKELIHAANEYIDLGEIGDYIVLEEKEN 183


>gi|94985051|ref|YP_604415.1| hypothetical protein Dgeo_0945 [Deinococcus geothermalis DSM 11300]
 gi|94555332|gb|ABF45246.1| protein of unknown function DUF88 [Deinococcus geothermalis DSM
           11300]
          Length = 181

 Score =  125 bits (314), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 75/172 (43%), Gaps = 10/172 (5%)

Query: 4   PREKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
            R ++ +FID  NLY S++ L    +++  +L++      ++ A  YT            
Sbjct: 6   SRPRVGVFIDTQNLYHSARDLLERTVNFETILRSATEGRELVHAIAYTVEREGEAT---- 61

Query: 63  LHPLLDWLHYNGFQVVAKVA-KEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
             P +  L   G++V             G+   + + D+ +  D     + L+ +V+ SG
Sbjct: 62  ARPFIYKLSALGYKVRRMNLTLHHVTEGGKAIYEGNWDMGIVADMVRLIDHLDIVVLGSG 121

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
           DG FT +V  LQ + K+V +++         + +L   AD F  L  L++ +
Sbjct: 122 DGDFTDVVEVLQERGKRVEVIAF----REHTAQKLIDAADRFTHLPDLEDAL 169


>gi|226198540|ref|ZP_03794107.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan
           9]
 gi|225929463|gb|EEH25483.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan
           9]
          Length = 486

 Score =  125 bits (313), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 41/182 (22%), Positives = 69/182 (37%), Gaps = 25/182 (13%)

Query: 1   MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
           M  P++ +  ALF D  N+    +   F   D + +L+    +  ++    Y        
Sbjct: 1   MALPQDSVNMALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC------- 53

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLE 114
             +         +H   F+++            R+  K+S D+ L VDA +       ++
Sbjct: 54  -DWDRYKTFKAAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVD 105

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
             VI SGD  F+ LV+ L+   K+V  V       +  SD L    D F+    L  E  
Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKRVIGV----GVKNSTSDLLVANCDEFIFYDDLAREQQ 161

Query: 175 RD 176
           R 
Sbjct: 162 RA 163


>gi|157835942|pdb|2QIP|A Chain A, Crystal Structure Of A Protein Of Unknown Function Vpa0982
           From Vibrio Parahaemolyticus Rimd 2210633
          Length = 165

 Score =  125 bits (313), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 15/168 (8%)

Query: 3   DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
           D +EKIA+ +D  N+Y + + A   + DY +          V+ A  Y     DP     
Sbjct: 7   DHKEKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATQEKEVVSAKAYAIASNDP----- 61

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
                   L   GF+V  K   +  +       K   DV + +DA E +  ++ +++ SG
Sbjct: 62  KQRQFHHILRGVGFEVXLKPYIQRRDGSA----KGDWDVGITLDAIEIAPDVDRVILVSG 117

Query: 122 DGCFTTLVAAL-QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
           DG F+ LV  + QR  KKVT+       P + S  L   AD F+ +  
Sbjct: 118 DGDFSLLVERIQQRYNKKVTV----YGVPRLTSQTLIDCADNFVAIDD 161


>gi|294495612|ref|YP_003542105.1| hypothetical protein Mmah_0940 [Methanohalophilus mahii DSM 5219]
 gi|292666611|gb|ADE36460.1| protein of unknown function DUF88 [Methanohalophilus mahii DSM
           5219]
          Length = 161

 Score =  125 bits (313), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 15/168 (8%)

Query: 1   MFDPREKIALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
           MF   +K+A+F+D  N++ S++ + +  +DY KLL+A      + RA  Y     D +Q 
Sbjct: 1   MFSS-QKLAVFVDVQNMFYSARNIHYGRLDYEKLLRAVVMERKLTRAIAYLVETPDIDQS 59

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119
                    ++   G++V +K  K   +       K   D+ +A+DA   +  ++ +V+ 
Sbjct: 60  -----GFKSFIGSIGWEVKSKALKVRPDGS----TKGDWDMGIAIDAISIAPKVDTIVLV 110

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
           SGDG F  L+  L+    +V + S         +++L   A     + 
Sbjct: 111 SGDGDFVDLINHLKAIGVRVEVHSF----KESTAEELINAATAHYPIE 154


>gi|172060127|ref|YP_001807779.1| hypothetical protein BamMC406_1072 [Burkholderia ambifaria MC40-6]
 gi|171992644|gb|ACB63563.1| protein of unknown function DUF88 [Burkholderia ambifaria MC40-6]
          Length = 501

 Score =  125 bits (313), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 40/188 (21%), Positives = 70/188 (37%), Gaps = 25/188 (13%)

Query: 1   MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
           M  P + +  A+F D  N+    +   +   D + +L+    +  ++    Y        
Sbjct: 1   MALPLDNVSMAVFCDFENVALGVRDAKYEKFDIQPVLERLLLKGSIVVKKAYC------- 53

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114
             +         +H   F+++            R+  K+S D+ L VDA +       ++
Sbjct: 54  -DWERYKGFKASMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVD 105

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
             VI SGD  F+ LV+ L+   KKV  V          SD L    D F+    L  E  
Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKKVIGV----GVKKSTSDLLVANCDEFIFYDDLVREQQ 161

Query: 175 RDPDEDKK 182
           R   + ++
Sbjct: 162 RAQAKREQ 169


>gi|237509073|ref|ZP_04521788.1| conserved hypothetical protein [Burkholderia pseudomallei MSHR346]
 gi|235001278|gb|EEP50702.1| conserved hypothetical protein [Burkholderia pseudomallei MSHR346]
          Length = 480

 Score =  125 bits (313), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 41/182 (22%), Positives = 69/182 (37%), Gaps = 25/182 (13%)

Query: 1   MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
           M  P++ +  ALF D  N+    +   F   D + +L+    +  ++    Y        
Sbjct: 1   MALPQDSVNMALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC------- 53

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLE 114
             +         +H   F+++            R+  K+S D+ L VDA +       ++
Sbjct: 54  -DWDRYKTFKAAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVD 105

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
             VI SGD  F+ LV+ L+   K+V  V       +  SD L    D F+    L  E  
Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKRVIGV----GVKNSTSDLLVANCDEFIFYDDLAREQQ 161

Query: 175 RD 176
           R 
Sbjct: 162 RA 163


>gi|226356465|ref|YP_002786205.1| hypothetical protein Deide_14960 [Deinococcus deserti VCD115]
 gi|226318455|gb|ACO46451.1| conserved hypothetical protein [Deinococcus deserti VCD115]
          Length = 193

 Score =  124 bits (312), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 74/172 (43%), Gaps = 10/172 (5%)

Query: 4   PREKIALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
            R ++ LF+D  NLY S++ L    +++  +L        ++ A  YT            
Sbjct: 6   QRPRVGLFVDTQNLYHSARDLLERTVNFETILNVATEGRELVHAISYTVEREGEAT---- 61

Query: 63  LHPLLDWLHYNGFQVVAKVA-KEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
             P +  L   G++V           + G+   + + D+ +  D     + L+ +V+ SG
Sbjct: 62  ARPFIYKLSALGYKVRRMNLTLHHVTDGGKAIYEGNWDMGIVADMVRLMDHLDIVVLGSG 121

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
           DG +T +V  LQ + K+V +++         + +L   AD FM L  L+  +
Sbjct: 122 DGDYTEIVEVLQERGKRVEVIAF----REHTAQKLIDAADRFMHLPDLEGAL 169


>gi|163782630|ref|ZP_02177627.1| hypothetical protein HG1285_17140 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882203|gb|EDP75710.1| hypothetical protein HG1285_17140 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 198

 Score =  124 bits (312), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 45/185 (24%), Positives = 78/185 (42%), Gaps = 17/185 (9%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP------- 56
             E++ +FIDG+NL+   + L   IDY +L+   R    ++RAY+YT V  D        
Sbjct: 2   NEERLMIFIDGSNLFHGIRYLNIKIDYGRLVDFLRESRRLVRAYFYTAVPQDRDVKKGTP 61

Query: 57  -EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGL 113
             +        LD L  +G +V     ++       + ++  +D+ LA D    +     
Sbjct: 62  EWESLIRQKRFLDELALSGIKVKLAKLRKLPSG---EFIEKEVDIMLATDMLSLAFQNAY 118

Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
           +  V+ SGD  F   V  +QR  K+V   +   +    +S  LR+  D F+ L    +  
Sbjct: 119 DTAVLVSGDSDFIYTVEEIQRIGKRVENATFKKT----SSYNLRKTCDRFVLLDNFLDRF 174

Query: 174 ARDPD 178
             +  
Sbjct: 175 TYEEK 179


>gi|76819463|ref|YP_335506.1| hypothetical protein BURPS1710b_A0347 [Burkholderia pseudomallei
           1710b]
 gi|254262408|ref|ZP_04953273.1| conserved hypothetical protein [Burkholderia pseudomallei 1710a]
 gi|76583936|gb|ABA53410.1| Protein of unknown function family [Burkholderia pseudomallei
           1710b]
 gi|254213410|gb|EET02795.1| conserved hypothetical protein [Burkholderia pseudomallei 1710a]
          Length = 483

 Score =  124 bits (312), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 41/182 (22%), Positives = 69/182 (37%), Gaps = 25/182 (13%)

Query: 1   MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
           M  P++ +  ALF D  N+    +   F   D + +L+    +  ++    Y        
Sbjct: 1   MALPQDSVNMALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC------- 53

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLE 114
             +         +H   F+++            R+  K+S D+ L VDA +       ++
Sbjct: 54  -DWDRYKTFKAAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVD 105

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
             VI SGD  F+ LV+ L+   K+V  V       +  SD L    D F+    L  E  
Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKRVIGV----GVKNSTSDLLVANCDEFIFYDDLAREQQ 161

Query: 175 RD 176
           R 
Sbjct: 162 RA 163


>gi|323527162|ref|YP_004229315.1| hypothetical protein BC1001_2841 [Burkholderia sp. CCGE1001]
 gi|323384164|gb|ADX56255.1| hypothetical protein BC1001_2841 [Burkholderia sp. CCGE1001]
          Length = 534

 Score =  124 bits (312), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 41/187 (21%), Positives = 67/187 (35%), Gaps = 25/187 (13%)

Query: 1   MFDPREKI--ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
           M    E +  ALF D  N+    +   +D  D + +L+    +  ++    Y        
Sbjct: 1   MASSNETVSMALFCDFENVALGVRDAKYDKFDIKLVLERLLLKGSIVVKKAYC------- 53

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114
             +         +H   F+++            R+  K+S D+ L VDA +       + 
Sbjct: 54  -DWDRYKSFKGAMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVN 105

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
             VI SGD  F+ LV+ L+   K+V  V          SD L    D F     L  E  
Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKQVIGV----GVQQSTSDLLIANCDEFFFYDDLVRESQ 161

Query: 175 RDPDEDK 181
           R   + +
Sbjct: 162 RAVAKRE 168


>gi|219883176|ref|YP_002478338.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7425]
 gi|219867301|gb|ACL47639.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7425]
          Length = 356

 Score =  124 bits (312), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 43/165 (26%), Positives = 76/165 (46%), Gaps = 12/165 (7%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           +A+ +D AN+Y     LG  ++Y +L+   ++     + ++YT +              L
Sbjct: 188 LAILVDAANIYHCGNELGVKVNYDQLIPGLQAGFESSQVWFYTGLKSGDF----RQQRFL 243

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTT 127
             L   G+QVV K      +       K+++DVELA++  + +E    +++ SGDG    
Sbjct: 244 ASLRQQGYQVVTKRVVRHEDGK----EKANLDVELALEMVKLAERYSDILLLSGDGDLAC 299

Query: 128 LVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
            V A ++K  +V ++S      S  S  L R AD F DL  + + 
Sbjct: 300 AVRAARQKGARVEVISF----RSRTSQDLIRAADDFRDLTDMVDR 340


>gi|126456340|ref|YP_001075832.1| hypothetical protein BURPS1106A_A1798 [Burkholderia pseudomallei
           1106a]
 gi|242312308|ref|ZP_04811325.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b]
 gi|126230108|gb|ABN93521.1| conserved hypothetical protein [Burkholderia pseudomallei 1106a]
 gi|242135547|gb|EES21950.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b]
          Length = 483

 Score =  124 bits (312), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 41/182 (22%), Positives = 69/182 (37%), Gaps = 25/182 (13%)

Query: 1   MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
           M  P++ +  ALF D  N+    +   F   D + +L+    +  ++    Y        
Sbjct: 1   MALPQDSVNMALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC------- 53

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLE 114
             +         +H   F+++            R+  K+S D+ L VDA +       ++
Sbjct: 54  -DWDRYKTFKAAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVD 105

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
             VI SGD  F+ LV+ L+   K+V  V       +  SD L    D F+    L  E  
Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKRVIGV----GVKNSTSDLLVANCDEFIFYDDLAREQQ 161

Query: 175 RD 176
           R 
Sbjct: 162 RA 163


>gi|170693531|ref|ZP_02884690.1| protein of unknown function DUF88 [Burkholderia graminis C4D1M]
 gi|170141686|gb|EDT09855.1| protein of unknown function DUF88 [Burkholderia graminis C4D1M]
          Length = 534

 Score =  124 bits (311), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 41/187 (21%), Positives = 67/187 (35%), Gaps = 25/187 (13%)

Query: 1   MFDPREKI--ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
           M    E +  ALF D  N+    +   +D  D + +L+    +  ++    Y        
Sbjct: 1   MASSNETVSMALFCDFENVALGVRDAKYDKFDIKLVLERLLLKGSIVVKKAYC------- 53

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114
             +         +H   F+++            R+  K+S D+ L VDA +       + 
Sbjct: 54  -DWDRYKSFKGAMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVN 105

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
             VI SGD  F+ LV+ L+   K+V  V          SD L    D F     L  E  
Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKQVIGV----GVQQSTSDLLIANCDEFFFYDDLVRESQ 161

Query: 175 RDPDEDK 181
           R   + +
Sbjct: 162 RTVAKRE 168


>gi|149190237|ref|ZP_01868512.1| hypothetical protein VSAK1_15107 [Vibrio shilonii AK1]
 gi|148835984|gb|EDL52946.1| hypothetical protein VSAK1_15107 [Vibrio shilonii AK1]
          Length = 174

 Score =  124 bits (311), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 15/166 (9%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            E IA+F+D  N+Y +++ A G   DY  L         +  A  Y     DP       
Sbjct: 16  MESIAIFVDVQNVYYTTRQAFGRRFDYNALWAKLSQSYRIDIARAYAISSTDP-----KQ 70

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
                 L   GF V  K   +  +       K   DV LA+D +E +  ++ +V+ SGDG
Sbjct: 71  RQFHHILRGIGFNVQLKPFIQRLDGSA----KGDWDVGLALDVYETANSVDRIVLISGDG 126

Query: 124 CFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
            F  LV  +Q++   KVT+        S+ ++ L + AD ++++  
Sbjct: 127 DFQVLVERIQQRFNTKVTVA----GVRSLTANNLIQAADDYIEIDS 168


>gi|332993345|gb|AEF03400.1| hypothetical protein ambt_09370 [Alteromonas sp. SN2]
          Length = 157

 Score =  124 bits (311), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 67/162 (41%), Gaps = 14/162 (8%)

Query: 5   REKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            + +ALF+D  N+Y +++     + DY    +       V++A  Y    GD     +  
Sbjct: 1   MDNVALFVDVQNIYYTTRQIHKCNFDYNHFWRLATEGRNVVKAVAYAIERGD-----TKQ 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
               + L   GF+V  K   +  +       K   DV + +DA E ++  + +V  +GDG
Sbjct: 56  REFQNILRGIGFEVKLKPFIQRADGSA----KGDWDVGITIDAMEYADLADTIVFATGDG 111

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165
            F  L + L  K K+V +         + S  L + A  ++ 
Sbjct: 112 DFDILASKLVDKGKEVEV----YGVQELTSVSLIKAASKYVP 149


>gi|163857253|ref|YP_001631550.1| hypothetical protein Bpet2940 [Bordetella petrii DSM 12804]
 gi|163260981|emb|CAP43283.1| conserved hypothetical protein [Bordetella petrii]
          Length = 385

 Score =  124 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 43/187 (22%), Positives = 69/187 (36%), Gaps = 27/187 (14%)

Query: 1   MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
           M   +E I  ALF D  N+    +   +   D + +L+    +  ++    Y        
Sbjct: 44  MTATQESINMALFCDFENVALGVRDANYQKFDIKPVLERLLLKGSIVVKKAYC------- 96

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLE 114
             +         +H   F+++            R+  K+S D+ L VDA +       ++
Sbjct: 97  -DWERYREFKATMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKLHVD 148

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
             VI SGD  F+ LV+ L+   K+V  V          SD L    D F+    L  E  
Sbjct: 149 TFVIISGDSDFSPLVSKLRENAKQVIGV----GVKRSTSDLLIANCDEFIFYDDLVRE-- 202

Query: 175 RDPDEDK 181
           R   E K
Sbjct: 203 RPRAEPK 209


>gi|28900837|ref|NP_800492.1| hypothetical protein VPA0982 [Vibrio parahaemolyticus RIMD 2210633]
 gi|260362550|ref|ZP_05775470.1| conserved hypothetical protein [Vibrio parahaemolyticus K5030]
 gi|260879204|ref|ZP_05891559.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034]
 gi|260896739|ref|ZP_05905235.1| conserved hypothetical protein [Vibrio parahaemolyticus Peru-466]
 gi|13506637|gb|AAK08637.1| hypothetical protein [Vibrio parahaemolyticus]
 gi|28809283|dbj|BAC62325.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|308087322|gb|EFO37017.1| conserved hypothetical protein [Vibrio parahaemolyticus Peru-466]
 gi|308094054|gb|EFO43749.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034]
 gi|308115257|gb|EFO52797.1| conserved hypothetical protein [Vibrio parahaemolyticus K5030]
 gi|328470741|gb|EGF41652.1| hypothetical protein VP10329_08072 [Vibrio parahaemolyticus 10329]
          Length = 162

 Score =  124 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 46/168 (27%), Positives = 73/168 (43%), Gaps = 15/168 (8%)

Query: 3   DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
           D +EKIA+ +D  N+Y + + A   + DY +          V+ A  Y     DP     
Sbjct: 4   DHKEKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATQEKEVVSAKAYAIASNDP----- 58

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
                   L   GF+V+ K   +  +       K   DV + +DA E +  ++ +++ SG
Sbjct: 59  KQRQFHHILRGVGFEVMLKPYIQRRDGSA----KGDWDVGITLDAIEIAPDVDRVILVSG 114

Query: 122 DGCFTTLVAAL-QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
           DG F+ LV  + QR  KKVT+       P + S  L   AD F+ +  
Sbjct: 115 DGDFSLLVERIQQRYNKKVTV----YGVPRLTSQTLIDCADNFVAIDD 158


>gi|119898953|ref|YP_934166.1| hypothetical protein azo2662 [Azoarcus sp. BH72]
 gi|119671366|emb|CAL95279.1| conserved hypothetical protein [Azoarcus sp. BH72]
          Length = 481

 Score =  124 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 39/178 (21%), Positives = 66/178 (37%), Gaps = 25/178 (14%)

Query: 1   MFDPREKI--ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
           M    + +  ALF D  N+    +   +D  D +++L+    +  ++    Y        
Sbjct: 1   MASSPDNVSMALFCDFENVALGVRDAKYDKFDIKRVLERLLLKGSIVVKKAYC------- 53

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLE 114
             +         +H   F+++            R+  K+S D+ L VDA +       + 
Sbjct: 54  -DWERYKGFKAAMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVN 105

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
             VI SGD  F+ LV+ L+   K+V  V          SD L    D F+    L  E
Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKQVIGV----GVKQSTSDLLIANCDEFIFYDDLVRE 159


>gi|320334669|ref|YP_004171380.1| hypothetical protein Deima_2072 [Deinococcus maricopensis DSM
           21211]
 gi|319755958|gb|ADV67715.1| Domain of unknown function DUF88 [Deinococcus maricopensis DSM
           21211]
          Length = 182

 Score =  124 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 74/179 (41%), Gaps = 11/179 (6%)

Query: 5   REKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
           + ++ +FID  NLY S++      +++ +LL+       ++RA  Y              
Sbjct: 7   KPRVGVFIDTQNLYHSARDLYERTVNFERLLQYATEGRELVRAVSYVVEREGEGT----A 62

Query: 64  HPLLDWLHYNGFQVVAKVAK-EFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
            P +  L   G++V     +   T   G+   + + D+ +  D     + L+ +V+ SGD
Sbjct: 63  RPFIYKLSTIGYKVRRMTLQLHHTNEQGKAIWEGNWDMGIVADMTRLLDHLDVIVLGSGD 122

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
           G FT +V   Q +  +V +++         + +L    D + + + +       P + K
Sbjct: 123 GDFTDMVEVFQERGVRVEVIAF----REHTAQKLVDACDRYTNWSDVDGAFM-PPAKRK 176


>gi|238024602|ref|YP_002908834.1| hypothetical protein bglu_2g12170 [Burkholderia glumae BGR1]
 gi|237879267|gb|ACR31599.1| Hypothetical protein bglu_2g12170 [Burkholderia glumae BGR1]
          Length = 538

 Score =  124 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 41/182 (22%), Positives = 69/182 (37%), Gaps = 25/182 (13%)

Query: 1   MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
           M  P++ +  ALF D  N+    +   F   D + +L+    +  ++    Y        
Sbjct: 1   MALPQDSVNMALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC------- 53

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114
             +         +H   F+++            R+  K+S D+ L VDA +       ++
Sbjct: 54  -DWDRYKTFKGAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVD 105

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
             VI SGD  F+ LV+ L+   K+V  V       +  SD L    D F+    L  E  
Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKRVIGV----GVKNSTSDLLVANCDEFIFYDDLAREQQ 161

Query: 175 RD 176
           R 
Sbjct: 162 RA 163


>gi|257094026|ref|YP_003167667.1| hypothetical protein CAP2UW1_2449 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257046550|gb|ACV35738.1| protein of unknown function DUF88 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 460

 Score =  124 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 39/178 (21%), Positives = 65/178 (36%), Gaps = 23/178 (12%)

Query: 9   ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           AL+ D  N+    +   +D  D + +L+    +  ++    Y          +       
Sbjct: 11  ALYCDFENVALGVRDAKYDKFDIKPVLERLLLKGSIVVKKAYC--------DWERYKGFK 62

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGC 124
             +H   F+++            R+  K+S D+ L VDA +       ++  VI SGD  
Sbjct: 63  STMHEASFELIEIPHL-------RQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGDSD 115

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182
           F+ LV+ L+   K V  V          SD L    D F+    L  E  R    D +
Sbjct: 116 FSPLVSKLRENAKYVIGV----GVKQSTSDLLIGNCDEFIFYDDLVRESQRAARRDSR 169


>gi|239996208|ref|ZP_04716732.1| hypothetical protein AmacA2_17270 [Alteromonas macleodii ATCC
           27126]
          Length = 153

 Score =  124 bits (311), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 38/164 (23%), Positives = 73/164 (44%), Gaps = 14/164 (8%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
             K  + +D  N+Y + + A   + +Y +  +       +  A+ Y    GD     S  
Sbjct: 1   MNKALVLVDVQNVYYTCRQAYKRNFNYNQFWRELTYNLDIAHAFAYAIDRGD-----SKQ 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
               + L   GF+V  K   +  +       K   DV + VDA E ++ ++ +++ SGDG
Sbjct: 56  REFQNILRAIGFEVKLKPFIQRADGSA----KGDWDVGITVDALEHADDVDEIILVSGDG 111

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
            F  LV AL+ K K VT+       P++ ++ +++ A  ++ + 
Sbjct: 112 DFDILVNALKAKGKTVTV----YGVPALTAESIQKVASKYVPID 151


>gi|221214025|ref|ZP_03586998.1| protein of unknown function DUF88 [Burkholderia multivorans CGD1]
 gi|221166202|gb|EED98675.1| protein of unknown function DUF88 [Burkholderia multivorans CGD1]
          Length = 479

 Score =  123 bits (310), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 39/180 (21%), Positives = 66/180 (36%), Gaps = 25/180 (13%)

Query: 9   ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           A+F D  N+    +   +   D + +L+    +  ++    Y          +       
Sbjct: 2   AVFCDFENVALGVRDAKYEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKGFK 53

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGC 124
             +H   F+++            R+  K+S D+ L VDA +       ++  VI SGD  
Sbjct: 54  AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVDTFVIVSGDSD 106

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR--DPDEDKK 182
           F+ LV+ L+   KKV  V          SD L    D F+    L  E  R     E ++
Sbjct: 107 FSPLVSKLRENAKKVIGV----GVKKSTSDLLVANCDEFIFYDDLVREQQRALAKREQQR 162


>gi|71908802|ref|YP_286389.1| hypothetical protein Daro_3189 [Dechloromonas aromatica RCB]
 gi|71848423|gb|AAZ47919.1| Protein of unknown function DUF88 [Dechloromonas aromatica RCB]
          Length = 421

 Score =  123 bits (310), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 39/180 (21%), Positives = 68/180 (37%), Gaps = 25/180 (13%)

Query: 9   ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           ALF D  N+    +   +   D R +L+   ++  ++    Y          +       
Sbjct: 11  ALFCDFENIALGVRDAQYEKFDIRPVLERLLAKGSIVVKKAYC--------DWDRYKAFK 62

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLEHLVIFSGDGC 124
             +H   F+++            R+  K+S D+ + VDA +       ++  VI SGD  
Sbjct: 63  AAMHEANFELIEIPHV-------RQSGKNSADIRMVVDALDLCYTKAHVDTFVIISGDSD 115

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK--NEIARDPDEDKK 182
           F+ LV+ L+   K+V  V          SD L    D F+    L    E  R P + ++
Sbjct: 116 FSPLVSKLRENAKRVIGV----GVKQSCSDLLVTNCDEFIYYDDLVRDREAGRGPQQRRE 171


>gi|220910751|ref|YP_002486061.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7425]
 gi|219867523|gb|ACL47860.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7425]
          Length = 343

 Score =  123 bits (310), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 50/165 (30%), Positives = 80/165 (48%), Gaps = 12/165 (7%)

Query: 9   ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68
           A+FID ANL  S++ L   +DY+K+ +         R ++YT       +Q       LD
Sbjct: 171 AIFIDAANLEYSARDLNLQLDYQKIYRFLTKGMKQPRVFFYTGERPGDARQKKQ----LD 226

Query: 69  WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTL 128
           WL   G+Q+V K              K+++DVELA+D +  ++ L   V+ SGDG FT  
Sbjct: 227 WLTGIGYQLVTKKIVRQPGGT----EKANLDVELALDMYRLADTLSRAVLVSGDGDFTQA 282

Query: 129 VAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
           +  L+++   V ++S      S  S  L + A+ ++DL     EI
Sbjct: 283 LQLLKQQGIAVDVISF----RSCTSKALIKAANRYIDLEQRTAEI 323


>gi|288817663|ref|YP_003432010.1| hypothetical protein HTH_0343 [Hydrogenobacter thermophilus TK-6]
 gi|288787062|dbj|BAI68809.1| hypothetical protein HTH_0343 [Hydrogenobacter thermophilus TK-6]
 gi|308751261|gb|ADO44744.1| protein of unknown function DUF88 [Hydrogenobacter thermophilus
           TK-6]
          Length = 199

 Score =  123 bits (310), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 46/179 (25%), Positives = 77/179 (43%), Gaps = 17/179 (9%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVG--------DP 56
            E++ +FIDG+NL+ + + L   IDY+KL+        +IRAY+Y  +            
Sbjct: 3   DERVIIFIDGSNLFHAIRYLNIRIDYQKLVDFLTEGRRLIRAYFYGAMPHEKDVKKNTPE 62

Query: 57  EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLE 114
            +        L+ L   G +V     K+       + V+  +D+ LA D    +     +
Sbjct: 63  WESLLRQKRFLEELSLMGIKVKTAHLKKLPSG---EYVEKEVDIMLATDMLSMAYMNTYD 119

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
             V+ SGD  ++  V  +QR  KKV   S   +    +S QLR+  D F+ L    +  
Sbjct: 120 TAVLISGDSDYSYTVEEVQRIGKKVENASFKRT----SSYQLRKACDRFILLDDYLDRF 174


>gi|221201416|ref|ZP_03574455.1| protein of unknown function DUF88 [Burkholderia multivorans CGD2M]
 gi|221208028|ref|ZP_03581034.1| protein of unknown function DUF88 [Burkholderia multivorans CGD2]
 gi|221172213|gb|EEE04654.1| protein of unknown function DUF88 [Burkholderia multivorans CGD2]
 gi|221178684|gb|EEE11092.1| protein of unknown function DUF88 [Burkholderia multivorans CGD2M]
          Length = 479

 Score =  123 bits (310), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 39/180 (21%), Positives = 66/180 (36%), Gaps = 25/180 (13%)

Query: 9   ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           A+F D  N+    +   +   D + +L+    +  ++    Y          +       
Sbjct: 2   AVFCDFENVALGVRDAKYEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKGFK 53

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGC 124
             +H   F+++            R+  K+S D+ L VDA +       ++  VI SGD  
Sbjct: 54  AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVDTFVIVSGDSD 106

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR--DPDEDKK 182
           F+ LV+ L+   KKV  V          SD L    D F+    L  E  R     E ++
Sbjct: 107 FSPLVSKLRENAKKVIGV----GVKKSTSDLLVANCDEFIFYDDLVREQQRALAKREQQR 162


>gi|53722351|ref|YP_111336.1| hypothetical protein BPSS1326 [Burkholderia pseudomallei K96243]
 gi|52212765|emb|CAH38797.1| conserved hypothetical protein [Burkholderia pseudomallei K96243]
          Length = 483

 Score =  123 bits (310), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 41/182 (22%), Positives = 69/182 (37%), Gaps = 25/182 (13%)

Query: 1   MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
           M  P++ +  ALF D  N+    +   F   D + +L+    +  ++    Y        
Sbjct: 1   MALPQDSVNMALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC------- 53

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLE 114
             +         +H   F+++            R+  K+S D+ L VDA +       ++
Sbjct: 54  -DWDRYKTFKAAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVD 105

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
             VI SGD  F+ LV+ L+   K+V  V       +  SD L    D F+    L  E  
Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKRVIGV----GVKNSTSDLLVANCDEFIFYDDLAREQQ 161

Query: 175 RD 176
           R 
Sbjct: 162 RA 163


>gi|87121768|ref|ZP_01077655.1| hypothetical protein MED121_19509 [Marinomonas sp. MED121]
 gi|86163019|gb|EAQ64297.1| hypothetical protein MED121_19509 [Marinomonas sp. MED121]
          Length = 163

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 39/162 (24%), Positives = 67/162 (41%), Gaps = 13/162 (8%)

Query: 3   DPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
           D   KIA+F+D  N+Y +S+       +Y+K      ++  +++AY Y    GD     S
Sbjct: 5   DSAPKIAIFVDVQNIYYTSRHTFARHFNYQKFWDEIAAQGEIVQAYAYAIDKGD-----S 59

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
                   L   GF+V  K   +  +       K   DV + +D    +  ++ +V+ SG
Sbjct: 60  KQAQFQQILRGIGFEVKLKPFIQRRDGSA----KGDWDVGITIDVLAAAPDVDIIVLASG 115

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163
           DG F  L+ A + K +     S V     + +  L    D +
Sbjct: 116 DGDFALLLDAARTKYQ---CQSQVYGVDKLTAAALIDSCDLY 154


>gi|307730797|ref|YP_003908021.1| hypothetical protein BC1003_2777 [Burkholderia sp. CCGE1003]
 gi|307585332|gb|ADN58730.1| protein of unknown function DUF88 [Burkholderia sp. CCGE1003]
          Length = 562

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 41/187 (21%), Positives = 67/187 (35%), Gaps = 25/187 (13%)

Query: 1   MFDPREKI--ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
           M    E +  ALF D  N+    +   +D  D + +L+    +  ++    Y        
Sbjct: 1   MASSNETVSMALFCDFENVALGVRDAKYDKFDIKLVLERLLLKGSIVVKKAYC------- 53

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114
             +         +H   F+++            R+  K+S D+ L VDA +       + 
Sbjct: 54  -DWDRYKSFKGAMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVN 105

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
             VI SGD  F+ LV+ L+   K+V  V          SD L    D F     L  E  
Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKQVIGV----GVQQSTSDLLIANCDEFFFYDDLVRESQ 161

Query: 175 RDPDEDK 181
           R   + +
Sbjct: 162 RAVAKRE 168


>gi|260901483|ref|ZP_05909878.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ4037]
 gi|308107667|gb|EFO45207.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ4037]
          Length = 162

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 46/168 (27%), Positives = 73/168 (43%), Gaps = 15/168 (8%)

Query: 3   DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
           D +EKIA+ +D  N+Y + + A   + DY +          V+ A  Y     DP     
Sbjct: 4   DHKEKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATQEKEVVSAKAYAIASNDP----- 58

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
                   L   GF+V+ K   +  +       K   DV + +DA E +  ++ +++ SG
Sbjct: 59  KQRQFHHILRGVGFEVMLKPYIQRRDGSA----KGDWDVGITLDAIEIAPDVDRVILVSG 114

Query: 122 DGCFTTLVAAL-QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
           DG F+ LV  + QR  KKVT+       P + S  L   AD F+ +  
Sbjct: 115 DGDFSLLVERIQQRYNKKVTV----YGAPRLTSQTLIDCADNFVAIDD 158


>gi|161525283|ref|YP_001580295.1| hypothetical protein Bmul_2113 [Burkholderia multivorans ATCC
           17616]
 gi|189349979|ref|YP_001945607.1| hypothetical protein BMULJ_01131 [Burkholderia multivorans ATCC
           17616]
 gi|160342712|gb|ABX15798.1| protein of unknown function DUF88 [Burkholderia multivorans ATCC
           17616]
 gi|189334001|dbj|BAG43071.1| conserved hypothetical protein [Burkholderia multivorans ATCC
           17616]
          Length = 508

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 41/190 (21%), Positives = 70/190 (36%), Gaps = 27/190 (14%)

Query: 1   MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
           M  P + +  A+F D  N+    +   +   D + +L+    +  ++    Y        
Sbjct: 1   MALPLDNVSMAVFCDFENVALGVRDAKYEKFDIKPVLEKLLLKGSIVVKKAYC------- 53

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114
             +         +H   F+++            R+  K+S D+ L VDA +       ++
Sbjct: 54  -DWDRYKGFKAAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVD 105

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
             VI SGD  F+ LV+ L+   KKV  V          SD L    D F+    L  E  
Sbjct: 106 TFVIVSGDSDFSPLVSKLRENAKKVIGV----GVKKSTSDLLVANCDEFIFYDDLVREQQ 161

Query: 175 R--DPDEDKK 182
           R     E ++
Sbjct: 162 RALAKREQQR 171


>gi|167839964|ref|ZP_02466648.1| hypothetical protein Bpse38_25044 [Burkholderia thailandensis
           MSMB43]
          Length = 445

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 40/172 (23%), Positives = 64/172 (37%), Gaps = 23/172 (13%)

Query: 9   ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           ALF D  N+    +   F   D R +L+    +  ++    Y          +       
Sbjct: 2   ALFCDFENIALGVRDTKFEKFDIRPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLEHLVIFSGDGC 124
             +H   F+++            R+  K+S D+ L VDA +       ++  VI SGD  
Sbjct: 54  AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
           F+ LV+ L+   K+V  V       +  SD L    D F+    L  E  R 
Sbjct: 107 FSPLVSKLRENAKRVIGV----GVKNSTSDLLVANCDEFIFYDDLAREQQRA 154


>gi|153836889|ref|ZP_01989556.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810]
 gi|149749847|gb|EDM60592.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810]
          Length = 162

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 46/168 (27%), Positives = 73/168 (43%), Gaps = 15/168 (8%)

Query: 3   DPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
           D +EKIA+ +D  N+Y + + A   + DY +          V+ A  Y     DP     
Sbjct: 4   DHKEKIAILVDVQNVYYTCREAYRSNFDYNQFWYVATQEKEVVSAKAYAIASNDP----- 58

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
                   L   GF+V+ K   +  +       K   DV + +DA E +  ++ +++ SG
Sbjct: 59  KQRQFHHILRGVGFEVMLKPYIQRRDGSA----KGDWDVGITLDAIEITPDVDRVILVSG 114

Query: 122 DGCFTTLVAAL-QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
           DG F+ LV  + QR  KKVT+       P + S  L   AD F+ +  
Sbjct: 115 DGDFSLLVERIQQRYNKKVTV----YGVPRLTSQTLIDCADNFVAIDD 158


>gi|241766896|ref|ZP_04764705.1| protein of unknown function DUF88 [Acidovorax delafieldii 2AN]
 gi|241362653|gb|EER58487.1| protein of unknown function DUF88 [Acidovorax delafieldii 2AN]
          Length = 316

 Score =  123 bits (309), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 42/187 (22%), Positives = 68/187 (36%), Gaps = 25/187 (13%)

Query: 1   MFDPREKI--ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
           M  P + I  ALF D  N+    +   +D  D + +L+    +  ++    Y        
Sbjct: 1   MASPTDSISMALFCDFENVALGVRDAKYDKFDIKPVLERLLLKGSIVVKKAYC------- 53

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114
             +         +H   F+++            R+  K+S D+ L VDA +       + 
Sbjct: 54  -DWERYKGFKATMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVN 105

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
             VI SGD  F+ LV+ L+   K+V  V          SD L    D F+    L  E  
Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKQVIGV----GVKQSTSDLLIANCDEFIFYDDLVRESQ 161

Query: 175 RDPDEDK 181
           R     +
Sbjct: 162 RAQARRQ 168


>gi|59711738|ref|YP_204514.1| hypothetical protein VF_1131 [Vibrio fischeri ES114]
 gi|59479839|gb|AAW85626.1| conserved protein [Vibrio fischeri ES114]
          Length = 159

 Score =  123 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 37/166 (22%), Positives = 65/166 (39%), Gaps = 15/166 (9%)

Query: 5   REKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            + +A+ +D  N+Y +++       DY  L         V+ A  Y     D        
Sbjct: 3   MKTVAILVDVQNIYYTTRDVYQRHFDYNALWAKVTEGRTVVGANAYAIARSDD-----KQ 57

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
               + L   GF V  K   +  +       K   DV + +DA E +E  + +V+ SGDG
Sbjct: 58  KQFHNILRGIGFDVKLKPFIQRRDGSA----KGDWDVGITLDAIELAEQADIVVLLSGDG 113

Query: 124 CFTTLVAALQ-RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
            F  L+  +Q R  K+V +         + ++ +   AD F+ +  
Sbjct: 114 DFDLLIKRIQSRFNKEVEV----YGVADLTANSIIDAADRFIPIED 155


>gi|217418449|ref|ZP_03449956.1| conserved hypothetical protein [Burkholderia pseudomallei 576]
 gi|217397753|gb|EEC37768.1| conserved hypothetical protein [Burkholderia pseudomallei 576]
          Length = 500

 Score =  123 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 41/182 (22%), Positives = 69/182 (37%), Gaps = 25/182 (13%)

Query: 1   MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
           M  P++ +  ALF D  N+    +   F   D + +L+    +  ++    Y        
Sbjct: 18  MALPQDSVNMALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC------- 70

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLE 114
             +         +H   F+++            R+  K+S D+ L VDA +       ++
Sbjct: 71  -DWDRYKTFKAAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVD 122

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
             VI SGD  F+ LV+ L+   K+V  V       +  SD L    D F+    L  E  
Sbjct: 123 TFVIISGDSDFSPLVSKLRENAKRVIGV----GVKNSTSDLLVANCDEFIFYDDLAREQQ 178

Query: 175 RD 176
           R 
Sbjct: 179 RA 180


>gi|261253046|ref|ZP_05945619.1| hypothetical protein VIA_003071 [Vibrio orientalis CIP 102891]
 gi|260936437|gb|EEX92426.1| hypothetical protein VIA_003071 [Vibrio orientalis CIP 102891]
          Length = 160

 Score =  123 bits (308), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 40/166 (24%), Positives = 68/166 (40%), Gaps = 15/166 (9%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            E +A+F+D  N+Y +++     + DY +          + +A  Y     DP       
Sbjct: 1   METVAIFVDVQNIYYTTRDKYRANFDYNQFWYIATEGKQIEQANAYAISSHDP-----KQ 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
                 L   GF V  K   +  +       K   DV +A+D FE +E ++ +++ SGDG
Sbjct: 56  RQFHHILRGIGFNVNLKPFIQRMDGSA----KGDWDVGIALDVFEAAEKVDRVILLSGDG 111

Query: 124 CFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
            F  LV  +Q K   KV +       P + +  L   +D F+ +  
Sbjct: 112 DFEILVQRIQEKFNTKVDV----YGVPGLTAQSLIDASDRFIPIDE 153


>gi|237808056|ref|YP_002892496.1| hypothetical protein Tola_1293 [Tolumonas auensis DSM 9187]
 gi|237500317|gb|ACQ92910.1| protein of unknown function DUF88 [Tolumonas auensis DSM 9187]
          Length = 162

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 38/165 (23%), Positives = 66/165 (40%), Gaps = 13/165 (7%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            E++ + +D  N+Y ++K A   + DY    K   +   V++A  Y    GD        
Sbjct: 1   MERVVVLVDVQNIYYTTKQAYNCNFDYNAFWKKVTANRQVVKAIAYAIDRGD-----EKQ 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
               + L   GF+V  K   +  +       K + D+ + +DA E ++  + +V+ SGDG
Sbjct: 56  RQFQNILRAIGFEVKLKPLIQRVDGTA----KGNWDIGITLDAMEYAKESDIVVLASGDG 111

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
            F  L+  +    K       V   P   S  L   A  F+ +  
Sbjct: 112 DFDLLINKI---HKDYDAWVEVYGVPKYTSVALVNSASKFIPVDS 153


>gi|315126212|ref|YP_004068215.1| hypothetical protein PSM_A1121 [Pseudoalteromonas sp. SM9913]
 gi|315014726|gb|ADT68064.1| hypothetical protein PSM_A1121 [Pseudoalteromonas sp. SM9913]
          Length = 164

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 35/166 (21%), Positives = 72/166 (43%), Gaps = 13/166 (7%)

Query: 4   PREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
            + ++ +F+D  N+Y + + + G + DY    +    +  +  A+ Y    GD +Q    
Sbjct: 7   SKPRVGIFVDVQNIYYTCRESYGKNFDYNAFWRMIEQQYDIECAFAYAIYRGDEKQNQ-- 64

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
                + L   GF+V  K   +  +       K   DV + +D  EQ + L+ +++ SGD
Sbjct: 65  ---FQNILRAIGFEVKLKPFIQRRDGSA----KGDWDVGITIDMLEQGKQLDKVILLSGD 117

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
           G F  L+  L+    +  +   V     + ++ L++ A+ F  +  
Sbjct: 118 GDFALLLGHLKN---QYNVSCDVYGADKLTAEVLKQSAEQFHLIDN 160


>gi|254183703|ref|ZP_04890295.1| conserved hypothetical protein [Burkholderia pseudomallei 1655]
 gi|184214236|gb|EDU11279.1| conserved hypothetical protein [Burkholderia pseudomallei 1655]
          Length = 474

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 64/172 (37%), Gaps = 23/172 (13%)

Query: 9   ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           ALF D  N+    +   F   D + +L+    +  ++    Y          +       
Sbjct: 2   ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLEHLVIFSGDGC 124
             +H   F+++            R+  K+S D+ L VDA +       ++  VI SGD  
Sbjct: 54  AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
           F+ LV+ L+   K+V  V       +  SD L    D F+    L  E  R 
Sbjct: 107 FSPLVSKLRENAKRVIGV----GVKNSTSDLLVANCDEFIFYDDLAREQQRA 154


>gi|332535674|ref|ZP_08411432.1| hypothetical protein PH505_dg00100 [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332034924|gb|EGI71450.1| hypothetical protein PH505_dg00100 [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 167

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 35/165 (21%), Positives = 73/165 (44%), Gaps = 13/165 (7%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
           + ++ +F+D  N+Y + + + G + DY    +   ++  +  A+ Y    GD +Q     
Sbjct: 11  KPRVGIFVDVQNIYYTCRESYGKNFDYNAFWRMMEAQYNIECAFAYAIYRGDEKQNQ--- 67

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
               + L   GF+V  K   +  +       K   DV + +D  EQ + L+ +++ SGDG
Sbjct: 68  --FQNILRAIGFEVKLKPFIQRRDGSA----KGDWDVGITIDMLEQGKNLDKVILLSGDG 121

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
            F  L+  L+    +  +   V     + ++ L++ A+ F  +  
Sbjct: 122 DFALLLGHLKN---QYNVPCDVYGADRLTAEVLKQSAEQFHLIDN 163


>gi|88859966|ref|ZP_01134605.1| hypothetical protein PTD2_18180 [Pseudoalteromonas tunicata D2]
 gi|88817960|gb|EAR27776.1| hypothetical protein PTD2_18180 [Pseudoalteromonas tunicata D2]
          Length = 157

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 38/161 (23%), Positives = 69/161 (42%), Gaps = 15/161 (9%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
              +A+F+D  N+Y + + A   + +Y +  +       V  A+ Y     D        
Sbjct: 1   MPTLAIFVDVQNVYYTCRQAYQANFNYNQFWREATEGYDVSYAFAYAIGRSD-----EKQ 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
               + L   GF++  K   + ++       K   DV + +D  + ++ ++ L++ SGDG
Sbjct: 56  KQFQNILRAIGFEIKLKPYIQRSDGSA----KGDWDVGITIDMMDYAQSVDKLILVSGDG 111

Query: 124 CFTTLVAALQRK-VKKVTIVSTVLSDPSMASDQLRRQADYF 163
            F  LV  +Q K  K V +       P++ SD L R A +F
Sbjct: 112 DFAMLVDRIQNKYDKPVEV----YGVPTLTSDSLIRSAKHF 148


>gi|167566002|ref|ZP_02358918.1| hypothetical protein BoklE_25814 [Burkholderia oklahomensis EO147]
          Length = 524

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 64/172 (37%), Gaps = 23/172 (13%)

Query: 9   ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           ALF D  N+    +   F   D + +L+    +  ++    Y          +       
Sbjct: 2   ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLEHLVIFSGDGC 124
             +H   F+++            R+  K+S D+ L VDA +       ++  VI SGD  
Sbjct: 54  AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
           F+ LV+ L+   K+V  V       +  SD L    D F+    L  E  R 
Sbjct: 107 FSPLVSKLRENAKRVIGV----GVKNSTSDLLVANCDEFIFYDDLAREQQRA 154


>gi|126442572|ref|YP_001062878.1| hypothetical protein BURPS668_A1883 [Burkholderia pseudomallei 668]
 gi|126222063|gb|ABN85568.1| conserved hypothetical protein [Burkholderia pseudomallei 668]
          Length = 477

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 64/172 (37%), Gaps = 23/172 (13%)

Query: 9   ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           ALF D  N+    +   F   D + +L+    +  ++    Y          +       
Sbjct: 2   ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLEHLVIFSGDGC 124
             +H   F+++            R+  K+S D+ L VDA +       ++  VI SGD  
Sbjct: 54  AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
           F+ LV+ L+   K+V  V       +  SD L    D F+    L  E  R 
Sbjct: 107 FSPLVSKLRENAKRVIGV----GVKNSTSDLLVANCDEFIFYDDLAREQQRA 154


>gi|288818569|ref|YP_003432917.1| hypothetical protein HTH_1263 [Hydrogenobacter thermophilus TK-6]
 gi|288787969|dbj|BAI69716.1| hypothetical protein HTH_1263 [Hydrogenobacter thermophilus TK-6]
 gi|308752160|gb|ADO45643.1| protein of unknown function DUF88 [Hydrogenobacter thermophilus
           TK-6]
          Length = 165

 Score =  122 bits (307), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 13/176 (7%)

Query: 5   REKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
           +++  +FIDGAN Y   K  L   ID  KL++ F+    +   ++Y       E+Q    
Sbjct: 2   KKRAGIFIDGANFYFIQKHILHQKIDLIKLVEYFKRDYTIYNTFFYLAYREGDEKQ---- 57

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
              +  L ++G  VV K  K+  +       K S+DV++A+D     +  +  V+ SGD 
Sbjct: 58  ENFIKLLAFSGITVVKKPIKQLKDGTY----KGSLDVDMALDVLLTKDNYDVAVLCSGDS 113

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
            F  LV  L+   K+V  VST       +S +L    D ++DLA +   I  +  E
Sbjct: 114 DFERLVWVLRDFSKEVICVST----KESSSVELVNACDRYIDLADIMPYIKLEERE 165


>gi|313679721|ref|YP_004057460.1| hypothetical protein Ocepr_0830 [Oceanithermus profundus DSM 14977]
 gi|313152436|gb|ADR36287.1| protein of unknown function DUF88 [Oceanithermus profundus DSM
           14977]
          Length = 184

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 38/178 (21%), Positives = 73/178 (41%), Gaps = 15/178 (8%)

Query: 1   MFDPR-----EKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVG 54
           M  P      +++ LF+D  NLY S++      +++  LLK       ++RA  Y     
Sbjct: 1   MKHPMGWNAMQRVGLFVDTQNLYHSARDYYERTVNFESLLKRAVQGRQLVRATAYVVERE 60

Query: 55  DPEQQFSPLHPLLDWLHYNGFQVVAKVA-KEFTENCGRKRVKSSMDVELAVDAFEQSEGL 113
           +    +    P +  L   G++V         T + G+   + + D+ +A D     + L
Sbjct: 61  NDTSAW----PFIYKLSTMGYRVRRMNLSVHHTTDEGKPIYEGNWDMGIAADMVRLMDAL 116

Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
           + +V+ SGDG F  ++  L  K  +V +++         + +L    D F  L  +  
Sbjct: 117 DVVVLGSGDGDFVDILEVLMEKGIRVEVIAF----KETTAQKLIDAVDQFTHLPEIDE 170


>gi|167742874|ref|ZP_02415648.1| hypothetical protein Bpse14_32667 [Burkholderia pseudomallei 14]
 gi|254191183|ref|ZP_04897688.1| conserved hypothetical protein [Burkholderia pseudomallei Pasteur
           52237]
 gi|157938856|gb|EDO94526.1| conserved hypothetical protein [Burkholderia pseudomallei Pasteur
           52237]
          Length = 474

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 64/172 (37%), Gaps = 23/172 (13%)

Query: 9   ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           ALF D  N+    +   F   D + +L+    +  ++    Y          +       
Sbjct: 2   ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLEHLVIFSGDGC 124
             +H   F+++            R+  K+S D+ L VDA +       ++  VI SGD  
Sbjct: 54  AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
           F+ LV+ L+   K+V  V       +  SD L    D F+    L  E  R 
Sbjct: 107 FSPLVSKLRENAKRVIGV----GVKNSTSDLLVANCDEFIFYDDLAREQQRA 154


>gi|167723901|ref|ZP_02407137.1| hypothetical protein BpseD_33095 [Burkholderia pseudomallei DM98]
          Length = 474

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 64/172 (37%), Gaps = 23/172 (13%)

Query: 9   ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           ALF D  N+    +   F   D + +L+    +  ++    Y          +       
Sbjct: 2   ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLEHLVIFSGDGC 124
             +H   F+++            R+  K+S D+ L VDA +       ++  VI SGD  
Sbjct: 54  AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
           F+ LV+ L+   K+V  V       +  SD L    D F+    L  E  R 
Sbjct: 107 FSPLVSKLRENAKRVIGV----GVKNSTSDLLVANCDEFIFYDDLAREQQRA 154


>gi|167923021|ref|ZP_02510112.1| hypothetical protein BpseBC_30982 [Burkholderia pseudomallei
           BCC215]
          Length = 477

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 64/172 (37%), Gaps = 23/172 (13%)

Query: 9   ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           ALF D  N+    +   F   D + +L+    +  ++    Y          +       
Sbjct: 2   ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLEHLVIFSGDGC 124
             +H   F+++            R+  K+S D+ L VDA +       ++  VI SGD  
Sbjct: 54  AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
           F+ LV+ L+   K+V  V       +  SD L    D F+    L  E  R 
Sbjct: 107 FSPLVSKLRENAKRVIGV----GVKNSTSDLLVANCDEFIFYDDLAREQQRA 154


>gi|167849880|ref|ZP_02475388.1| hypothetical protein BpseB_31835 [Burkholderia pseudomallei B7210]
          Length = 474

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 64/172 (37%), Gaps = 23/172 (13%)

Query: 9   ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           ALF D  N+    +   F   D + +L+    +  ++    Y          +       
Sbjct: 2   ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLEHLVIFSGDGC 124
             +H   F+++            R+  K+S D+ L VDA +       ++  VI SGD  
Sbjct: 54  AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
           F+ LV+ L+   K+V  V       +  SD L    D F+    L  E  R 
Sbjct: 107 FSPLVSKLRENAKRVIGV----GVKNSTSDLLVANCDEFIFYDDLAREQQRA 154


>gi|167915186|ref|ZP_02502277.1| hypothetical protein Bpse112_32216 [Burkholderia pseudomallei 112]
          Length = 474

 Score =  122 bits (306), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 64/172 (37%), Gaps = 23/172 (13%)

Query: 9   ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           ALF D  N+    +   F   D + +L+    +  ++    Y          +       
Sbjct: 2   ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLEHLVIFSGDGC 124
             +H   F+++            R+  K+S D+ L VDA +       ++  VI SGD  
Sbjct: 54  AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
           F+ LV+ L+   K+V  V       +  SD L    D F+    L  E  R 
Sbjct: 107 FSPLVSKLRENAKRVIGV----GVKNSTSDLLVANCDEFIFYDDLAREQQRA 154


>gi|295677487|ref|YP_003606011.1| protein of unknown function DUF88 [Burkholderia sp. CCGE1002]
 gi|295437330|gb|ADG16500.1| protein of unknown function DUF88 [Burkholderia sp. CCGE1002]
          Length = 515

 Score =  122 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 41/182 (22%), Positives = 65/182 (35%), Gaps = 25/182 (13%)

Query: 1   MFDPREKI--ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
           M    E +  ALF D  N+    +   +D  D + +L+    +  ++    Y        
Sbjct: 1   MASSNENVSMALFCDFENVALGVRDAKYDKFDIKLVLERLLLKGSIVVKKAYC------- 53

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114
             +         +H   F+++            R+  K+S D+ L VDA +       + 
Sbjct: 54  -DWDRYKSFKGAMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVN 105

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
             VI SGD  F+ LV+ L+   K+V  V          SD L    D F     L  E  
Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKQVIGV----GVQQSTSDLLIANCDEFFFYDDLVRESQ 161

Query: 175 RD 176
           R 
Sbjct: 162 RA 163


>gi|167828427|ref|ZP_02459898.1| hypothetical protein Bpseu9_32389 [Burkholderia pseudomallei 9]
          Length = 469

 Score =  122 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 64/172 (37%), Gaps = 23/172 (13%)

Query: 9   ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           ALF D  N+    +   F   D + +L+    +  ++    Y          +       
Sbjct: 2   ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLEHLVIFSGDGC 124
             +H   F+++            R+  K+S D+ L VDA +       ++  VI SGD  
Sbjct: 54  AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
           F+ LV+ L+   K+V  V       +  SD L    D F+    L  E  R 
Sbjct: 107 FSPLVSKLRENAKRVIGV----GVKNSTSDLLVANCDEFIFYDDLAREQQRA 154


>gi|167898481|ref|ZP_02485882.1| hypothetical protein Bpse7_32411 [Burkholderia pseudomallei 7894]
          Length = 456

 Score =  122 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 64/172 (37%), Gaps = 23/172 (13%)

Query: 9   ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           ALF D  N+    +   F   D + +L+    +  ++    Y          +       
Sbjct: 2   ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLEHLVIFSGDGC 124
             +H   F+++            R+  K+S D+ L VDA +       ++  VI SGD  
Sbjct: 54  AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
           F+ LV+ L+   K+V  V       +  SD L    D F+    L  E  R 
Sbjct: 107 FSPLVSKLRENAKRVIGV----GVKNSTSDLLVANCDEFIFYDDLAREQQRA 154


>gi|91785005|ref|YP_560211.1| hypothetical protein Bxe_A0775 [Burkholderia xenovorans LB400]
 gi|91688959|gb|ABE32159.1| Conserved hypothetical protein [Burkholderia xenovorans LB400]
          Length = 480

 Score =  122 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 41/187 (21%), Positives = 67/187 (35%), Gaps = 25/187 (13%)

Query: 1   MFDPREKI--ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
           M    E +  ALF D  N+    +   +D  D + +L+    +  ++    Y        
Sbjct: 1   MASSNETVSMALFCDFENVALGVRDAKYDKFDIKLVLERLLLKGSIVVKKAYC------- 53

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114
             +         +H   F+++            R+  K+S D+ L VDA +       + 
Sbjct: 54  -DWDRYKSFKGAMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVN 105

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
             VI SGD  F+ LV+ L+   K+V  V          SD L    D F     L  E  
Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKQVIGV----GVQQSTSDLLVANCDEFFFYDDLVRESQ 161

Query: 175 RDPDEDK 181
           R   + +
Sbjct: 162 RTVAKRE 168


>gi|167906832|ref|ZP_02494037.1| hypothetical protein BpseN_31680 [Burkholderia pseudomallei NCTC
           13177]
          Length = 470

 Score =  122 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 64/172 (37%), Gaps = 23/172 (13%)

Query: 9   ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           ALF D  N+    +   F   D + +L+    +  ++    Y          +       
Sbjct: 2   ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLEHLVIFSGDGC 124
             +H   F+++            R+  K+S D+ L VDA +       ++  VI SGD  
Sbjct: 54  AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
           F+ LV+ L+   K+V  V       +  SD L    D F+    L  E  R 
Sbjct: 107 FSPLVSKLRENAKRVIGV----GVKNSTSDLLVANCDEFIFYDDLAREQQRA 154


>gi|258593302|emb|CBE69641.1| conserved protein of unknown function [NC10 bacterium 'Dutch
           sediment']
          Length = 251

 Score =  122 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 39/180 (21%), Positives = 69/180 (38%), Gaps = 23/180 (12%)

Query: 2   FDPREKIALFIDGANLYASSKALG-FDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
            +  +++ALFID  N+    K       +   +L+    +  ++    Y          +
Sbjct: 1   MNEEKRLALFIDFENIAIGIKEAKHKQFEIGLVLERLVEKGKIMVKRAYA--------DW 52

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLV 117
                    LH    +++    K  +        K+S D+ LAVDA + +   E L+  V
Sbjct: 53  GRYAEHKRALHEAAIELIDIPQKRISG-------KNSADIRLAVDAMDMAYSKEHLDTFV 105

Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
           I SGD  F+ LV+ L+   K+V  +       +  S+ L    D F+    L     + P
Sbjct: 106 IVSGDSDFSPLVSKLRENNKEVIGL----GVKNSVSELLVDNCDEFIYYEDLIRHPKKAP 161


>gi|134295221|ref|YP_001118956.1| hypothetical protein Bcep1808_1110 [Burkholderia vietnamiensis G4]
 gi|134138378|gb|ABO54121.1| protein of unknown function DUF88 [Burkholderia vietnamiensis G4]
          Length = 507

 Score =  122 bits (305), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 42/190 (22%), Positives = 70/190 (36%), Gaps = 27/190 (14%)

Query: 1   MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
           M  P + I  A+F D  N+    +   +   D + +L+    +  ++    Y        
Sbjct: 1   MALPLDNISMAVFCDFENVALGVRDAKYEKFDIKPVLERLLLKGSIVVKKAYC------- 53

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114
             +         +H   F+++            R+  K+S D+ L VDA +       ++
Sbjct: 54  -DWERYKGFKASMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVD 105

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
             VI SGD  F+ LV+ L+   KKV  V          SD L    D F+    L  E  
Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKKVIGV----GVKKSTSDLLVANCDEFIFYDDLVREQQ 161

Query: 175 R--DPDEDKK 182
           R     E ++
Sbjct: 162 RALAKREQQR 171


>gi|296157195|ref|ZP_06840031.1| protein of unknown function DUF88 [Burkholderia sp. Ch1-1]
 gi|295892531|gb|EFG72313.1| protein of unknown function DUF88 [Burkholderia sp. Ch1-1]
          Length = 479

 Score =  121 bits (304), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 41/187 (21%), Positives = 67/187 (35%), Gaps = 25/187 (13%)

Query: 1   MFDPREKI--ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
           M    E +  ALF D  N+    +   +D  D + +L+    +  ++    Y        
Sbjct: 1   MASSNETVSMALFCDFENVALGVRDAKYDKFDIKLVLERLLLKGSIVVKKAYC------- 53

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114
             +         +H   F+++            R+  K+S D+ L VDA +       + 
Sbjct: 54  -DWDRYKSFKGAMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVN 105

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
             VI SGD  F+ LV+ L+   K+V  V          SD L    D F     L  E  
Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKQVIGV----GVQQSTSDLLVANCDEFFFYDDLVRESQ 161

Query: 175 RDPDEDK 181
           R   + +
Sbjct: 162 RTVAKRE 168


>gi|170732518|ref|YP_001764465.1| hypothetical protein Bcenmc03_1168 [Burkholderia cenocepacia MC0-3]
 gi|169815760|gb|ACA90343.1| protein of unknown function DUF88 [Burkholderia cenocepacia MC0-3]
          Length = 498

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 41/190 (21%), Positives = 70/190 (36%), Gaps = 27/190 (14%)

Query: 1   MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
           M  P + +  A+F D  N+    +   +   D + +L+    +  ++    Y        
Sbjct: 1   MALPLDNVSMAVFCDFENVALGVRDAKYEKFDIKPVLERLLLKGSIVVKKAYC------- 53

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114
             +         +H   F+++            R+  K+S D+ L VDA +       ++
Sbjct: 54  -DWDRYKGFKASMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVD 105

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
             VI SGD  F+ LV+ L+   KKV  V          SD L    D F+    L  E  
Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKKVIGV----GVKKSTSDLLVANCDEFIFYDDLVREQQ 161

Query: 175 R--DPDEDKK 182
           R     E ++
Sbjct: 162 RALAKREQQQ 171


>gi|167573079|ref|ZP_02365953.1| hypothetical protein BoklC_24798 [Burkholderia oklahomensis C6786]
          Length = 468

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 64/172 (37%), Gaps = 23/172 (13%)

Query: 9   ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           ALF D  N+    +   F   D + +L+    +  ++    Y          +       
Sbjct: 2   ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLEHLVIFSGDGC 124
             +H   F+++            R+  K+S D+ L VDA +       ++  VI SGD  
Sbjct: 54  AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
           F+ LV+ L+   K+V  V       +  SD L    D F+    L  E  R 
Sbjct: 107 FSPLVSKLRENAKRVIGV----GVKNSTSDLLVANCDEFIFYDDLAREQQRA 154


>gi|148657548|ref|YP_001277753.1| hypothetical protein RoseRS_3445 [Roseiflexus sp. RS-1]
 gi|148569658|gb|ABQ91803.1| protein of unknown function DUF88 [Roseiflexus sp. RS-1]
          Length = 842

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 40/184 (21%), Positives = 75/184 (40%), Gaps = 20/184 (10%)

Query: 1   MFDPREK--IALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
           M     +  +A+FID  N+Y S +  L  + ++  ++        V+ A  Y        
Sbjct: 32  MATDNPRLDVAVFIDFENVYVSVRDKLDVNPNFEIIMDRVADLGRVVIARAYA------- 84

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRV--KSSMDVELAVDAFEQS---EG 112
             +     +   L+ NG + +      +  + GR     K+S+D+ L +DA +       
Sbjct: 85  -DWYRYPRVTSALYANGIEPMYVPTYYYDRDLGRTGRAIKNSVDMNLCIDAMKTLYTNPN 143

Query: 113 LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
           +   V+ +GD  F  LV A+++  K+V I+         AS  L + AD F+    L  +
Sbjct: 144 IAKFVLATGDRDFIPLVNAIRQHGKEVIII----GVGGAASGHLAQSADEFIFYEQLLGK 199

Query: 173 IARD 176
             + 
Sbjct: 200 KPQP 203


>gi|312881670|ref|ZP_07741448.1| hypothetical protein VIBC2010_10472 [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309370733|gb|EFP98207.1| hypothetical protein VIBC2010_10472 [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 158

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 38/165 (23%), Positives = 65/165 (39%), Gaps = 13/165 (7%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            EKIA+F+D  N+Y +++       DY        +   V+ A  Y         +    
Sbjct: 1   MEKIAIFVDVQNIYYTTREKYRAHFDYNHFWHVVATEKEVVVANAYAIA-----SKHEKQ 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
                 L   GF+V  K   +  +       K   D+ +A+D ++ S+ ++ +++ SGDG
Sbjct: 56  RQFHHILRGIGFEVKLKPFLQRKDGTA----KGDWDIGIALDIYDISKEVDRVILLSGDG 111

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
            F  LV  ++   K       V   PS+ S  L    D F  +  
Sbjct: 112 DFEVLVDRVK---KTSNAKFDVFGVPSLTSQSLIDVCDNFTPIDE 153


>gi|83717296|ref|YP_439296.1| hypothetical protein BTH_II1099 [Burkholderia thailandensis E264]
 gi|83651121|gb|ABC35185.1| Protein of unknown function family [Burkholderia thailandensis
           E264]
          Length = 472

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 41/182 (22%), Positives = 69/182 (37%), Gaps = 25/182 (13%)

Query: 1   MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
           M  P++ +  ALF D  N+    +   F   D + +L+    +  ++    Y        
Sbjct: 1   MALPQDSVNMALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC------- 53

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLE 114
             +         +H   F+++            R+  K+S D+ L VDA +       ++
Sbjct: 54  -DWDRYKTFKAAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVD 105

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
             VI SGD  F+ LV+ L+   K+V  V       +  SD L    D F+    L  E  
Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKRVIGV----GVKNSTSDLLVANCDEFIFYDDLAREQQ 161

Query: 175 RD 176
           R 
Sbjct: 162 RA 163


>gi|90415555|ref|ZP_01223489.1| hypothetical protein GB2207_09566 [marine gamma proteobacterium
           HTCC2207]
 gi|90332878|gb|EAS48048.1| hypothetical protein GB2207_09566 [marine gamma proteobacterium
           HTCC2207]
          Length = 161

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 40/163 (24%), Positives = 73/163 (44%), Gaps = 16/163 (9%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            +KIA+F+D  N+Y + K   G   +YR+L +    +  +++A  Y     D  Q     
Sbjct: 1   MKKIAVFVDVQNIYYTVKEQFGCYFNYRELWRQLGEQGEIVQATAYAIERNDAGQ----- 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFS 120
                 L   GF+V  K   + ++       K   DV +A+D  + +      E +V+ S
Sbjct: 56  RGFQQVLRDIGFEVKLKPFIQRSDGSA----KGDWDVGIAIDIMDCAATTNPPEEIVLLS 111

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163
           GDG F  L+A + +   +  + ++V    ++ +  L   AD+F
Sbjct: 112 GDGDFDLLLARVSQ---RYAVSTSVFGVAALTAASLIDAADHF 151


>gi|254174034|ref|ZP_04880697.1| protein of unknown function [Burkholderia mallei ATCC 10399]
 gi|254356680|ref|ZP_04972955.1| protein of unknown function [Burkholderia mallei 2002721280]
 gi|148025707|gb|EDK83830.1| protein of unknown function [Burkholderia mallei 2002721280]
 gi|160695081|gb|EDP85051.1| protein of unknown function [Burkholderia mallei ATCC 10399]
          Length = 477

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 64/172 (37%), Gaps = 23/172 (13%)

Query: 9   ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           ALF D  N+    +   F   D + +L+    +  ++    Y          +       
Sbjct: 2   ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLEHLVIFSGDGC 124
             +H   F+++            R+  K+S D+ L VDA +       ++  VI SGD  
Sbjct: 54  AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
           F+ LV+ L+   K+V  V       +  SD L    D F+    L  E  R 
Sbjct: 107 FSPLVSKLRENAKRVIGV----GVKNSTSDLLVANCDEFIFYDDLAREQQRA 154


>gi|209517483|ref|ZP_03266324.1| protein of unknown function DUF88 [Burkholderia sp. H160]
 gi|209502137|gb|EEA02152.1| protein of unknown function DUF88 [Burkholderia sp. H160]
          Length = 505

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 41/182 (22%), Positives = 65/182 (35%), Gaps = 25/182 (13%)

Query: 1   MFDPREKI--ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
           M    E +  ALF D  N+    +   +D  D + +L+    +  ++    Y        
Sbjct: 1   MASSNENVSMALFCDFENVALGVRDAKYDKFDIKLVLERLLLKGSIVVKKAYC------- 53

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114
             +         +H   F+++            R+  K+S D+ L VDA +       + 
Sbjct: 54  -DWDRYKSFKGAMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVN 105

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
             VI SGD  F+ LV+ L+   K+V  V          SD L    D F     L  E  
Sbjct: 106 TFVIISGDSDFSPLVSKLRENDKQVIGV----GVQQSTSDLLIANCDEFFFYDDLVRESQ 161

Query: 175 RD 176
           R 
Sbjct: 162 RA 163


>gi|187925165|ref|YP_001896807.1| hypothetical protein Bphyt_3191 [Burkholderia phytofirmans PsJN]
 gi|187716359|gb|ACD17583.1| protein of unknown function DUF88 [Burkholderia phytofirmans PsJN]
          Length = 478

 Score =  121 bits (304), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 41/187 (21%), Positives = 67/187 (35%), Gaps = 25/187 (13%)

Query: 1   MFDPREKI--ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
           M    E +  ALF D  N+    +   +D  D + +L+    +  ++    Y        
Sbjct: 1   MASSNETVSMALFCDFENVALGVRDAKYDKFDIKLVLERLLLKGSIVVKKAYC------- 53

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114
             +         +H   F+++            R+  K+S D+ L VDA +       + 
Sbjct: 54  -DWDRYKSFKGAMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVN 105

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
             VI SGD  F+ LV+ L+   K+V  V          SD L    D F     L  E  
Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKQVIGV----GVQQSTSDLLIANCDEFFFYDDLVRESQ 161

Query: 175 RDPDEDK 181
           R   + +
Sbjct: 162 RTVAKRE 168


>gi|167820046|ref|ZP_02451726.1| hypothetical protein Bpse9_33267 [Burkholderia pseudomallei 91]
          Length = 460

 Score =  121 bits (303), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 64/172 (37%), Gaps = 23/172 (13%)

Query: 9   ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           ALF D  N+    +   F   D + +L+    +  ++    Y          +       
Sbjct: 2   ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLEHLVIFSGDGC 124
             +H   F+++            R+  K+S D+ L VDA +       ++  VI SGD  
Sbjct: 54  AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
           F+ LV+ L+   K+V  V       +  SD L    D F+    L  E  R 
Sbjct: 107 FSPLVSKLRENAKRVIGV----GVKNSTSDLLVANCDEFIFYDDLAREQQRA 154


>gi|317970442|ref|ZP_07971832.1| hypothetical protein SCB02_12967 [Synechococcus sp. CB0205]
          Length = 168

 Score =  120 bits (302), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 47/173 (27%), Positives = 88/173 (50%), Gaps = 12/173 (6%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAF--RSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
           +AL +DG +++   + LG+  D R+LL+    +S   +  A++YT +    +Q      P
Sbjct: 3   LALAVDGHSMFYVQQKLGWFFDPRRLLEYATAQSGVELGSAFWYTGLKDATDQ-----RP 57

Query: 66  LLDWLHYNGFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
             D L   GF V  K  +E   ++  R+  ++++DVE+A+D    +  ++ + + SG   
Sbjct: 58  FRDALTSLGFTVRTKPLREVGHDSDQRQFARANLDVEIAIDLMAVAHRIDEVWVMSGSRD 117

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
              L+  L+ +  KV ++ST      M   +LR  AD F+DL+ LK ++ +  
Sbjct: 118 LERLLEVLRIRGLKVVLMST----EGMVPRELRNAADRFVDLSSLKPQLEKTD 166


>gi|326794335|ref|YP_004312155.1| hypothetical protein Marme_1044 [Marinomonas mediterranea MMB-1]
 gi|326545099|gb|ADZ90319.1| Domain of unknown function DUF88 [Marinomonas mediterranea MMB-1]
          Length = 204

 Score =  120 bits (302), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 62/162 (38%), Gaps = 13/162 (8%)

Query: 10  LFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68
           +F+D  N+Y +++       DY        S+  +  AY Y    GD            +
Sbjct: 53  IFVDVQNIYYTTRQTYRRGFDYNAFWAEVSSKYDIKNAYAYAIDRGD-----EKQKQFQN 107

Query: 69  WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTL 128
            L   GF V  K   +  +       K   DV + +D  E +E  + +++ +GDG F+ L
Sbjct: 108 ILRAIGFDVKLKPYIQRADGS----SKGDWDVGITIDVMEHAEESDVVILVTGDGDFSIL 163

Query: 129 VAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
              ++ K +    +  V     + +  L   AD +  +   +
Sbjct: 164 ADKIKGKYR---CLVEVYGVEKLTATSLINTADVYYPIEDSR 202


>gi|168703228|ref|ZP_02735505.1| hypothetical protein GobsU_27096 [Gemmata obscuriglobus UQM 2246]
          Length = 532

 Score =  120 bits (302), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 72/185 (38%), Gaps = 29/185 (15%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           +A+FID  N+           +  K+L+    +  ++    Y          +S      
Sbjct: 13  LAVFIDFENMGLGFNNRRDRFEISKVLERLVEKGKIVCKKAYA--------DWSRFGMYT 64

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGC 124
             LH +  +++    +           K+S D+ L VDA + +   + ++  VI SGD  
Sbjct: 65  GALHESAIELIEIPRR-------GMTGKNSADIRLVVDAIDLAYSKDHIDTFVIVSGDSD 117

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL-KNEI------ARDP 177
           F+ LV+ L+   K V  +    +     SD LR   D F+    L +  I       + P
Sbjct: 118 FSPLVSKLKELGKHVIGLGLSDA----TSDLLRDNCDEFIYYEDLDRAPIIPIAVNEQIP 173

Query: 178 DEDKK 182
           ++ +K
Sbjct: 174 EKKRK 178


>gi|319790275|ref|YP_004151908.1| hypothetical protein Theam_1304 [Thermovibrio ammonificans HB-1]
 gi|317114777|gb|ADU97267.1| hypothetical protein Theam_1304 [Thermovibrio ammonificans HB-1]
          Length = 181

 Score =  120 bits (302), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 45/169 (26%), Positives = 79/169 (46%), Gaps = 13/169 (7%)

Query: 8   IALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           + +F+D  N+Y  +K  L   +D++ LLK       + RA  Y   +    Q        
Sbjct: 18  VGVFVDMQNIYYGAKNTLKRKVDFKNLLKIAVRGRQLYRAIAYLVDLERVNQD-----GF 72

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGC 124
           +  L   G++V  K  K+F  N  +   K+  D+ +A+DA   +E   ++ +V+ SGDG 
Sbjct: 73  IYVLRSIGYEVKLKEPKKF-YNWDKVEYKADWDMGIAIDAIAMAENGKVDVVVLMSGDGD 131

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
           F  L+  L+ K  KV ++S      S+ + +L   A  ++DL    + I
Sbjct: 132 FVDLINFLKAKGIKVEVISF----RSITAKELIYSASEYIDLEEFADFI 176


>gi|114562206|ref|YP_749719.1| hypothetical protein Sfri_1028 [Shewanella frigidimarina NCIMB 400]
 gi|114333499|gb|ABI70881.1| protein of unknown function DUF88 [Shewanella frigidimarina NCIMB
           400]
          Length = 157

 Score =  120 bits (302), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 41/161 (25%), Positives = 70/161 (43%), Gaps = 13/161 (8%)

Query: 8   IALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           +A+F+D  N+Y + K   G   +YR L K   ++  +  A  Y     D  Q        
Sbjct: 4   LAVFVDVQNIYYTCKQGFGRSFNYRALYKHLSAQGCISHAIAYAIAPADDGQ-----VKF 58

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126
            D L + GF V  K   + ++       K   DV + +D  E +  ++ +++ SGDG F 
Sbjct: 59  QDALKHIGFTVKTKPYIQRSDGSA----KGDWDVGITIDMLEIAPTVDEVILLSGDGDFD 114

Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
            L   L++  +  T  + VLS   + +  L  QA +F  + 
Sbjct: 115 LL---LKKINQTTTCYTHVLSVERLTAKSLTDQAQHFTAID 152


>gi|74317958|ref|YP_315698.1| hypothetical protein Tbd_1940 [Thiobacillus denitrificans ATCC
           25259]
 gi|74057453|gb|AAZ97893.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC
           25259]
          Length = 308

 Score =  120 bits (301), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 38/178 (21%), Positives = 64/178 (35%), Gaps = 23/178 (12%)

Query: 9   ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           A+F D  N+    K   + D   R +L+    +  ++    Y          +       
Sbjct: 10  AVFCDFENVAIGLKEGNYPDFKIRPVLERLLLKGSIVVKKAYC--------DWDRYKEYK 61

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLEHLVIFSGDGC 124
             +H   F+++            R+  K+S D+ + VDA +       ++  VI SGD  
Sbjct: 62  RDMHEAAFELIEIPHV-------RQSGKNSADIRMVVDALDLCYTKAHIDAFVIISGDSD 114

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182
           F+ L++ L+   K V  +         AS  L    D F+    L    AR     KK
Sbjct: 115 FSPLISKLKENGKSVIGI----GVRGSASSLLISNCDEFIFYEDLVQPKARPTRPAKK 168


>gi|325525773|gb|EGD03507.1| hypothetical protein B1M_16120 [Burkholderia sp. TJI49]
          Length = 287

 Score =  120 bits (301), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 39/180 (21%), Positives = 66/180 (36%), Gaps = 25/180 (13%)

Query: 9   ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           A+F D  N+    +   +   D + +L+    +  ++    Y          +       
Sbjct: 2   AVFCDFENVALGVRDAKYEKFDIKPVLERLLLKGSIVVKKAYC--------DWDRYKGFK 53

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGC 124
             +H   F+++            R+  K+S D+ L VDA +       ++  VI SGD  
Sbjct: 54  AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGDSD 106

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR--DPDEDKK 182
           F+ LV+ L+   KKV  V          SD L    D F+    L  E  R     E ++
Sbjct: 107 FSPLVSKLRENAKKVIGV----GVKKSTSDLLVANCDEFIFYDDLVREQQRALAKREQQR 162


>gi|254245848|ref|ZP_04939169.1| hypothetical protein BCPG_00568 [Burkholderia cenocepacia PC184]
 gi|124870624|gb|EAY62340.1| hypothetical protein BCPG_00568 [Burkholderia cenocepacia PC184]
          Length = 500

 Score =  120 bits (301), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 41/190 (21%), Positives = 70/190 (36%), Gaps = 27/190 (14%)

Query: 1   MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
           M  P + +  A+F D  N+    +   +   D + +L+    +  ++    Y        
Sbjct: 1   MALPLDNVSMAVFCDFENVALGVRDAKYEKFDIKPVLERLLLKGSIVVKKAYC------- 53

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114
             +         +H   F+++            R+  K+S D+ L VDA +       ++
Sbjct: 54  -DWDRYKGFKASMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVD 105

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
             VI SGD  F+ LV+ L+   KKV  V          SD L    D F+    L  E  
Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKKVIGV----GVKKSTSDLLVANCDEFIFYDDLVREQQ 161

Query: 175 R--DPDEDKK 182
           R     E ++
Sbjct: 162 RALAKREQQQ 171


>gi|78065774|ref|YP_368543.1| hypothetical protein Bcep18194_A4302 [Burkholderia sp. 383]
 gi|77966519|gb|ABB07899.1| protein of unknown function DUF88 [Burkholderia sp. 383]
          Length = 496

 Score =  120 bits (301), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 41/190 (21%), Positives = 70/190 (36%), Gaps = 27/190 (14%)

Query: 1   MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
           M  P + +  A+F D  N+    +   +   D + +L+    +  ++    Y        
Sbjct: 1   MALPLDNVSMAVFCDFENVALGVRDAKYEKFDIKPVLERLLLKGSIVVKKAYC------- 53

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114
             +         +H   F+++            R+  K+S D+ L VDA +       ++
Sbjct: 54  -DWDRYKGFKASMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVD 105

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
             VI SGD  F+ LV+ L+   KKV  V          SD L    D F+    L  E  
Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKKVIGV----GVKKSTSDLLVANCDEFIFYDDLVREQQ 161

Query: 175 R--DPDEDKK 182
           R     E ++
Sbjct: 162 RALAKREQQQ 171


>gi|218290176|ref|ZP_03494335.1| protein of unknown function DUF88 [Alicyclobacillus acidocaldarius
           LAA1]
 gi|258512267|ref|YP_003185701.1| hypothetical protein Aaci_2303 [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|218239771|gb|EED06961.1| protein of unknown function DUF88 [Alicyclobacillus acidocaldarius
           LAA1]
 gi|257478993|gb|ACV59312.1| protein of unknown function DUF88 [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
          Length = 168

 Score =  120 bits (301), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 50/171 (29%), Positives = 92/171 (53%), Gaps = 9/171 (5%)

Query: 7   KIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
           +++LF+DGAN Y   +  L + ID +KLL+  +S+  ++ A+YY       + +      
Sbjct: 2   RVSLFVDGANYYYMQRDKLKWTIDAQKLLEWAKSKGELVDAFYYIGRSSPSDVREQK--- 58

Query: 66  LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
            LD L Y+G+ +V K  KE  +  G    K+++D+E+ +D F   E  +  ++ SGDG F
Sbjct: 59  YLDMLAYSGYSIVTKDIKEIVQEDGSITRKANLDIEIVLDMFNTIENYDMAILVSGDGDF 118

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD-YFMDLAYLKNEIAR 175
              +  L+ + KK  ++ST        + +LR  A  +F+D+  L++++ R
Sbjct: 119 ERALQLLRARGKKFIVLSTA----GFIASELRMVAGMHFIDVNTLRDQLER 165


>gi|206559459|ref|YP_002230220.1| hypothetical protein BCAL1072 [Burkholderia cenocepacia J2315]
 gi|198035497|emb|CAR51375.1| conserved hypothetical protein [Burkholderia cenocepacia J2315]
          Length = 491

 Score =  120 bits (301), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 41/190 (21%), Positives = 70/190 (36%), Gaps = 27/190 (14%)

Query: 1   MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
           M  P + +  A+F D  N+    +   +   D + +L+    +  ++    Y        
Sbjct: 1   MALPLDNVSMAVFCDFENVALGVRDAKYEKFDIKPVLERLLLKGSIVVKKAYC------- 53

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114
             +         +H   F+++            R+  K+S D+ L VDA +       ++
Sbjct: 54  -DWDRYKGFKASMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVD 105

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
             VI SGD  F+ LV+ L+   KKV  V          SD L    D F+    L  E  
Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKKVIGV----GVKKSTSDLLVANCDEFIFYDDLVREQQ 161

Query: 175 R--DPDEDKK 182
           R     E ++
Sbjct: 162 RALAKREQQQ 171


>gi|15605927|ref|NP_213304.1| hypothetical protein aq_430 [Aquifex aeolicus VF5]
 gi|2983099|gb|AAC06705.1| hypothetical protein aq_430 [Aquifex aeolicus VF5]
          Length = 183

 Score =  120 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 45/168 (26%), Positives = 73/168 (43%), Gaps = 13/168 (7%)

Query: 8   IALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
            A+F+DG NLY   K  L   ID  K +  F+    +   ++Y     + E+Q       
Sbjct: 26  AAIFVDGTNLYFIQKNFLNAKIDIVKFVNYFKQFYDIYNTFFYLAYKEEDEKQER----F 81

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126
              L ++G  VV K  K+  +       K  +DV++A+D     +  +  ++ SGD  F 
Sbjct: 82  FKLLAFSGITVVKKPVKQLKDGSL----KGDVDVDIAIDMLLTKDNYDTAILCSGDSDFE 137

Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
            LV  L+   K+V  VST       +S +L    D ++DL  +   I 
Sbjct: 138 RLVYVLRNFGKEVICVST----KESSSIELVNACDRYIDLKEILPFIK 181


>gi|152994925|ref|YP_001339760.1| hypothetical protein Mmwyl1_0893 [Marinomonas sp. MWYL1]
 gi|150835849|gb|ABR69825.1| protein of unknown function DUF88 [Marinomonas sp. MWYL1]
          Length = 158

 Score =  120 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 39/166 (23%), Positives = 66/166 (39%), Gaps = 15/166 (9%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
              + + +D  N+Y +++ A G   DY    +       V++A  Y    GD        
Sbjct: 1   MTNVTILVDVQNVYYTTRQAFGRSFDYNTFWQQATEGRNVVKAIAYAIDRGD-----EKQ 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
               + L   GF+V  K   + ++       K   DV +A+D  E  +  + LV+ SGDG
Sbjct: 56  RQFQNILRAIGFEVKLKPFIQRSDGSA----KGDWDVGIAIDGIEHGKDSDVLVLLSGDG 111

Query: 124 CFTTLVAALQRKVK-KVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
            F  L   L+ K + +V +        S+ +  L   AD F  +  
Sbjct: 112 DFDILAKTLREKYQTRVEV----YGVESLTAQSLINAADSFTAIGN 153


>gi|163782049|ref|ZP_02177048.1| hypothetical protein HG1285_17989 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882581|gb|EDP76086.1| hypothetical protein HG1285_17989 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 165

 Score =  120 bits (300), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 46/171 (26%), Positives = 77/171 (45%), Gaps = 13/171 (7%)

Query: 5   REKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            ++  +FIDG NLY   K  L   ID  KL++ F+    +   ++Y     + ++Q    
Sbjct: 1   MKRAGIFIDGTNLYFVQKNFLHRKIDIVKLVEYFKRFYSIYNVFFYLAYREEDDKQEK-- 58

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
                 L ++G  VV K  K   +       K ++DVE+ +D     +  +  V+ SGD 
Sbjct: 59  --FYRMLAFSGITVVRKPLKHLPDGSL----KGNLDVEIVIDMLLTKDNYDVAVLCSGDS 112

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
            F  L+  L+   K+V  VST       +S ++   AD ++DL  +  EI 
Sbjct: 113 DFEKLINVLRSFGKEVVCVST----RDSSSIEVVNAADRYIDLRDIIEEIK 159


>gi|186475309|ref|YP_001856779.1| hypothetical protein Bphy_0541 [Burkholderia phymatum STM815]
 gi|184191768|gb|ACC69733.1| protein of unknown function DUF88 [Burkholderia phymatum STM815]
          Length = 440

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 68/187 (36%), Gaps = 25/187 (13%)

Query: 1   MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
           M   ++ +  ALF D  N+    +   +   D + +L+    +  ++    Y        
Sbjct: 1   MASSQDTVSMALFCDFENVALGVRDAKYEKFDIKLVLERLLLKGSIVVKKAYC------- 53

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114
             +         +H   F+++            R+  K+S D+ L VDA +       + 
Sbjct: 54  -DWDRYKGFKAAMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVN 105

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
             VI SGD  F+ LV+ L+   K+V  V          SD L    D F+    L  E  
Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKQVIGV----GVQRSTSDLLTANCDEFIFYDDLVRESQ 161

Query: 175 RDPDEDK 181
           R   + +
Sbjct: 162 RAAAKRE 168


>gi|107022270|ref|YP_620597.1| hypothetical protein Bcen_0714 [Burkholderia cenocepacia AU 1054]
 gi|116689215|ref|YP_834838.1| hypothetical protein Bcen2424_1193 [Burkholderia cenocepacia
           HI2424]
 gi|105892459|gb|ABF75624.1| protein of unknown function DUF88 [Burkholderia cenocepacia AU
           1054]
 gi|116647304|gb|ABK07945.1| protein of unknown function DUF88 [Burkholderia cenocepacia HI2424]
          Length = 498

 Score =  119 bits (299), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 40/188 (21%), Positives = 70/188 (37%), Gaps = 25/188 (13%)

Query: 1   MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
           M  P + +  A+F D  N+    +   +   D + +L+    +  ++    Y        
Sbjct: 1   MALPLDNVSMAVFCDFENVALGVRDAKYEKFDIKPVLERLLLKGSIVVKKAYC------- 53

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114
             +         +H   F+++            R+  K+S D+ L VDA +       ++
Sbjct: 54  -DWDRYKGFKASMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVD 105

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
             VI SGD  F+ LV+ L+   KKV  V          SD L    D F+    L  E  
Sbjct: 106 TFVIISGDSDFSPLVSKLRENAKKVIGV----GVKKSTSDLLVANCDEFIFYDDLVREQQ 161

Query: 175 RDPDEDKK 182
           R   + ++
Sbjct: 162 RALAKREQ 169


>gi|300087254|ref|YP_003757776.1| hypothetical protein Dehly_0124 [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
 gi|299526987|gb|ADJ25455.1| protein of unknown function DUF88 [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
          Length = 227

 Score =  119 bits (299), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 38/175 (21%), Positives = 66/175 (37%), Gaps = 10/175 (5%)

Query: 1   MFDPREKIALFIDGANLYASSKA--LGFDIDYRKLLKAFRSRAIVIRAYYYTTVV--GDP 56
           M +  +++ +FIDG+N+Y S KA     DID  K          +IR YYY   V   + 
Sbjct: 1   MAERDDRVMIFIDGSNMYHSLKAHWHRSDIDLSKFCAKLVGERRLIRIYYYNVEVGQREE 60

Query: 57  EQQFSPLHPLLDWLHYNGF-QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGL 113
            +++       D +    + ++        +        +  +DV LA D          
Sbjct: 61  PERYKDQKVFFDSVEAMPYTELRLGRLVYTSGWPNTPPFEKGVDVMLATDMLTHCFKNNY 120

Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
              ++ +GD  F   + A++   K V +           S  LR+ AD   D+  
Sbjct: 121 NTAILVAGDADFVGALQAVKDYGKHVEVALFG---EEGTSVPLRKVADVVHDIDK 172


>gi|167577696|ref|ZP_02370570.1| hypothetical protein BthaT_06146 [Burkholderia thailandensis TXDOH]
          Length = 463

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 64/172 (37%), Gaps = 23/172 (13%)

Query: 9   ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           ALF D  N+    +   F   D + +L+    +  ++    Y          +       
Sbjct: 2   ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLEHLVIFSGDGC 124
             +H   F+++            R+  K+S D+ L VDA +       ++  VI SGD  
Sbjct: 54  AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
           F+ LV+ L+   K+V  V       +  SD L    D F+    L  E  R 
Sbjct: 107 FSPLVSKLRENAKRVIGV----GVKNSTSDLLVANCDEFIFYDDLAREQQRA 154


>gi|167615822|ref|ZP_02384457.1| hypothetical protein BthaB_05981 [Burkholderia thailandensis Bt4]
 gi|257142413|ref|ZP_05590675.1| hypothetical protein BthaA_24818 [Burkholderia thailandensis E264]
          Length = 463

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 64/172 (37%), Gaps = 23/172 (13%)

Query: 9   ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           ALF D  N+    +   F   D + +L+    +  ++    Y          +       
Sbjct: 2   ALFCDFENIALGVRDTKFEKFDIKPVLEKLLLKGSIVVKKAYC--------DWDRYKTFK 53

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLEHLVIFSGDGC 124
             +H   F+++            R+  K+S D+ L VDA +       ++  VI SGD  
Sbjct: 54  AAMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKAHVDTFVIISGDSD 106

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
           F+ LV+ L+   K+V  V       +  SD L    D F+    L  E  R 
Sbjct: 107 FSPLVSKLRENAKRVIGV----GVKNSTSDLLVANCDEFIFYDDLAREQQRA 154


>gi|156744317|ref|YP_001434446.1| hypothetical protein Rcas_4412 [Roseiflexus castenholzii DSM 13941]
 gi|156235645|gb|ABU60428.1| protein of unknown function DUF88 [Roseiflexus castenholzii DSM
           13941]
          Length = 787

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 40/184 (21%), Positives = 75/184 (40%), Gaps = 20/184 (10%)

Query: 1   MFDPREK--IALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
           M     +  +A+FID  N+Y S +  L  + ++  ++        V+ A  Y        
Sbjct: 1   MATDNPRLDVAVFIDFENVYVSVRDKLDVNPNFEIIMDRVADLGRVVIARAYA------- 53

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRV--KSSMDVELAVDAFEQS---EG 112
             +     +   L+ NG + +      +  + GR     K+S+D+ L +DA +       
Sbjct: 54  -DWYRYPRVTSALYANGIEPMYVPTYYYDRDLGRTGRAIKNSVDMNLCIDAMKTLYTNPN 112

Query: 113 LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
           +   V+ +GD  F  LV A+++  K+V I+         AS  L + AD F+    L  +
Sbjct: 113 IGKFVLATGDRDFIPLVNAIRQHGKEVIII----GVGGAASGHLAQSADEFIFYEQLLGK 168

Query: 173 IARD 176
             + 
Sbjct: 169 KPQP 172


>gi|331005219|ref|ZP_08328612.1| hypothetical protein IMCC1989_1379 [gamma proteobacterium IMCC1989]
 gi|330420962|gb|EGG95235.1| hypothetical protein IMCC1989_1379 [gamma proteobacterium IMCC1989]
          Length = 170

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 69/168 (41%), Gaps = 15/168 (8%)

Query: 4   PREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
            R+KIA+F+D  N+Y +++       +YR L +  +++  ++ A  Y    GD       
Sbjct: 10  SRKKIAVFVDVQNIYYTTRDRYNKPFNYRHLWQRLQAQGDIVIANAYAIHRGDD-----K 64

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFS 120
                  L   GF +  K   +  +       K   DV +A+D  + +     + +++ S
Sbjct: 65  QLQFQSALKSIGFTMKLKPYIQRKDGSA----KGDWDVGIAIDVMDVAASGTADTIILLS 120

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
           GDG F  L+  ++   K   + + V     + ++ L   A  F  +  
Sbjct: 121 GDGDFDLLLEKVK---KDYHMTTEVYGVAELTANSLITSATTFHPITE 165


>gi|119471730|ref|ZP_01614090.1| hypothetical protein ATW7_08766 [Alteromonadales bacterium TW-7]
 gi|119445353|gb|EAW26641.1| hypothetical protein ATW7_08766 [Alteromonadales bacterium TW-7]
          Length = 162

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 71/163 (43%), Gaps = 13/163 (7%)

Query: 7   KIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
           K+ +F+D  N+Y + + +   + DY    +  + +  +  A+ Y    GD +Q       
Sbjct: 8   KVGIFVDVQNIYYTCRESYSKNFDYNAFWRVIQEQYEIDCAFAYAIYRGDEKQNQ----- 62

Query: 66  LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
             + L   GF+V  K   +  +       K   DV + +D  E  + L+ +++ SGDG F
Sbjct: 63  FQNILRAIGFEVKLKPFIQRRDGSA----KGDWDVGITIDMLEHGKNLDKVILLSGDGDF 118

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
             L+A L+    +  +   V     + ++ L++ A+ F  +  
Sbjct: 119 ALLLAHLKN---QYNVPCDVYGADKLTAEVLKQSAEQFHLIDD 158


>gi|297567046|ref|YP_003686018.1| hypothetical protein Mesil_2661 [Meiothermus silvanus DSM 9946]
 gi|296851495|gb|ADH64510.1| protein of unknown function DUF88 [Meiothermus silvanus DSM 9946]
          Length = 181

 Score =  119 bits (298), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 44/170 (25%), Positives = 82/170 (48%), Gaps = 12/170 (7%)

Query: 5   REKIALFIDGANLYA---SSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            E++A+FIDG+NLY    SS +  + +D+ + ++   +   ++RAYYY   +   +    
Sbjct: 1   MERVAVFIDGSNLYKGLVSSLSSDYRLDFVQFIETLVAGRKLLRAYYYNAPLPVEDPAAK 60

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIF 119
                L++L    +  V     E     G   V+  +D+++A+D  + +     +  V+ 
Sbjct: 61  AHQSFLNYLKRVPYVAVRLGRLERR---GEGFVEKGVDIQIAIDLLKLAYANAYDVAVLV 117

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
           SGDG F  +V  +Q   K+V       +  +++S +L +QAD F  L  L
Sbjct: 118 SGDGDFADVVKVIQDMGKQV----ENSTFQALSSHRLAQQADRFFPLDEL 163


>gi|91776174|ref|YP_545930.1| hypothetical protein Mfla_1822 [Methylobacillus flagellatus KT]
 gi|91710161|gb|ABE50089.1| protein of unknown function DUF88 [Methylobacillus flagellatus KT]
          Length = 275

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 35/177 (19%), Positives = 58/177 (32%), Gaps = 27/177 (15%)

Query: 6   EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
            ++A+ ID  N +       F     +LL+       V     Y        Q++     
Sbjct: 9   PRLAILIDADNTF------RFINVIDELLEEISKYGDVSIRRIYGDWTETKMQRWK---- 58

Query: 66  LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDG 123
                     +   +  +++    G    K+S D  L +DA +   +  L+   I S D 
Sbjct: 59  ------EILPKYAIQPIQQYANTKG----KNSTDSALIIDAMDLLYTAPLDGFCIVSSDS 108

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
            FT L   L+   K+V              D L    + F+ +  L  E   DP E 
Sbjct: 109 DFTRLATRLRESGKQVYGFGEQK-----TPDSLIAACNKFIYIEILSKEKLSDPPEP 160


>gi|318040287|ref|ZP_07972243.1| hypothetical protein SCB01_01212 [Synechococcus sp. CB0101]
          Length = 175

 Score =  118 bits (297), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 49/176 (27%), Positives = 83/176 (47%), Gaps = 12/176 (6%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFR--SRAIVIRAYYYTTVVGDPEQQFSPLHP 65
           +AL +DG +++   + LG+  D R+LL          +  A++YT +    +Q      P
Sbjct: 3   LALAVDGHSMFYVQQKLGWFFDPRRLLAYATATPGVEISSAFWYTGLKDPTDQ-----RP 57

Query: 66  LLDWLHYNGFQVVAKVAKEFTENCG-RKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
             D L   GF V  K  +E       R+  ++++DVE+A+D    +   + + + SG   
Sbjct: 58  FRDALTSLGFTVRTKPLREVGGEADQRQFARANLDVEVAIDLLAVAHRTDEVWLLSGSRD 117

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
              LV  L+ K  KV +VST      M   +LR  AD F+DLA L+ ++ +   + 
Sbjct: 118 LERLVEVLRIKGLKVVLVSTD----GMVPRELRNAADRFLDLAELRPQLEKTEHQQ 169


>gi|108762087|ref|YP_628313.1| hypothetical protein MXAN_0030 [Myxococcus xanthus DK 1622]
 gi|108465967|gb|ABF91152.1| conserved hypothetical protein [Myxococcus xanthus DK 1622]
          Length = 320

 Score =  118 bits (297), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 65/183 (35%), Gaps = 25/183 (13%)

Query: 3   DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
           +   +IALFID  NL  ++       D +  L     +  V+    Y          +S 
Sbjct: 5   NAEHRIALFIDFENLVTNTGISSASFDLQPSLDRLLEKGKVVFRRAYC--------DWSR 56

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIF 119
                  LH  G +++             +  K+  D+ L +DA E     E ++  VI 
Sbjct: 57  FAEAKIRLHEFGVELIDVP-------PSTRAGKNGADMRLVIDALELCYARESIDTFVIG 109

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
           SGD  F  L   L+   + V  ++         S    +  D F+ L   +   +R    
Sbjct: 110 SGDSDFCPLAYKLRENGRTVIGLA----VKESTSPLFVKACDEFIYL---RPRQSRSDKG 162

Query: 180 DKK 182
           DK+
Sbjct: 163 DKE 165


>gi|167589253|ref|ZP_02381641.1| hypothetical protein BuboB_28211 [Burkholderia ubonensis Bu]
          Length = 280

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 39/180 (21%), Positives = 66/180 (36%), Gaps = 25/180 (13%)

Query: 9   ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           A+F D  N+    +   +   D + +L+    +  ++    Y          +       
Sbjct: 2   AVFCDFENVALGVRDAKYEKFDIKPVLERLLLKGSIVVKKAYC--------DWDRYKGFK 53

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGC 124
             +H   F+++            R+  K+S D+ L VDA +       ++  VI SGD  
Sbjct: 54  ASMHEASFELIEIPHV-------RQSGKNSADIRLVVDALDLCYTKSHVDTFVIISGDSD 106

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR--DPDEDKK 182
           F+ LV+ L+   KKV  V          SD L    D F+    L  E  R     E ++
Sbjct: 107 FSPLVSKLRENAKKVIGV----GVKQSTSDLLVANCDEFIFYDDLVREQQRALAKREQQR 162


>gi|254524406|ref|ZP_05136461.1| protein containing DUF88 [Stenotrophomonas sp. SKA14]
 gi|219721997|gb|EED40522.1| protein containing DUF88 [Stenotrophomonas sp. SKA14]
          Length = 259

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 54/171 (31%), Gaps = 29/171 (16%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M +P ++IAL ID  N  AS           ++L       +      Y        + +
Sbjct: 1   MSEPEKRIALLIDADNAPAS--------KIDEVLAEVARYGVANVRRAYGNWKSPRLKGW 52

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118
                          +   +  ++F  + G    K++ D+ + +DA +   +  L+   I
Sbjct: 53  ----------EAVLHEYAIRPIQQFAYSKG----KNASDMAMVIDAMDLLYARNLDGFAI 98

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
            S D  FT +V  L     KV       +               F  L  L
Sbjct: 99  VSSDADFTPMVMRLLTDGVKVYGFGEKKTPEP-----FVNACSKFTYLEAL 144


>gi|194367375|ref|YP_002029985.1| hypothetical protein Smal_3603 [Stenotrophomonas maltophilia
           R551-3]
 gi|194350179|gb|ACF53302.1| protein of unknown function DUF88 [Stenotrophomonas maltophilia
           R551-3]
          Length = 259

 Score =  118 bits (296), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 54/171 (31%), Gaps = 29/171 (16%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M +P ++IAL ID  N  AS           ++L       +      Y        + +
Sbjct: 1   MSEPEKRIALLIDADNAPAS--------KIDEVLAEVARYGVANVRRAYGNWKSPRLKGW 52

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118
                          +   +  ++F  + G    K++ D+ + +DA +   +  L+   I
Sbjct: 53  ----------EAVLHEYAIRPIQQFAYSKG----KNASDMAMVIDAMDLLYARNLDGFAI 98

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
            S D  FT +V  L     KV       +               F  L  L
Sbjct: 99  VSSDADFTPMVMRLLTDGVKVYGFGEKKTPEP-----FVNACSKFTYLEAL 144


>gi|34557802|ref|NP_907617.1| hypothetical protein WS1458 [Wolinella succinogenes DSM 1740]
 gi|34483520|emb|CAE10517.1| conserved hypothetical protein [Wolinella succinogenes]
          Length = 248

 Score =  118 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 52/176 (29%), Gaps = 29/176 (16%)

Query: 6   EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
           +++A+ ID  N  AS           +LL        +     Y        + +     
Sbjct: 10  KRLAVLIDADNAQASV--------LGELLAEISKYGTLNIKRAYGDWTSSNLKSWKEHLH 61

Query: 66  LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDG 123
                     +      ++F    G    K++ D  L +DA +      LE   + S D 
Sbjct: 62  ----------KYAIAPIQQFNYTSG----KNATDSALIIDAMDLLHDAPLEGFCLVSSDS 107

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
            FT L   ++     V              +      D F+    L+ E  R P+ 
Sbjct: 108 DFTRLATRIRESGLVVYGFGEKK-----TPEAFVAACDKFIYTEILRQEEQRRPES 158


>gi|330943326|gb|EGH45703.1| hypothetical protein PSYPI_26719 [Pseudomonas syringae pv. pisi
           str. 1704B]
          Length = 179

 Score =  118 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 54/179 (30%), Gaps = 29/179 (16%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            ++ +A+ ID  N  A+            L +      +      Y    G     +   
Sbjct: 9   SQKHLAVLIDADNAPAAI--------VEGLFEEIAKYGVASVKRIYGDWTGPQLGGWKK- 59

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSG 121
                           +  ++F    G    K++ D  L +DA +   +   +   + S 
Sbjct: 60  ---------VLLDYSIQPIQQFAYTKG----KNATDSSLIIDAMDLLYTRRFDGFCLVSS 106

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           D  FT L + L+ +   V       +     +       D F+ +  L+ EI      D
Sbjct: 107 DSDFTRLASRLREEGLTVYGFGEEKTPKPFVA-----ACDKFIYIELLREEITTPATGD 160


>gi|289677366|ref|ZP_06498256.1| hypothetical protein PsyrpsF_29051 [Pseudomonas syringae pv.
           syringae FF5]
 gi|330897316|gb|EGH28735.1| hypothetical protein PSYJA_07026 [Pseudomonas syringae pv. japonica
           str. M301072PT]
 gi|330981730|gb|EGH79833.1| hypothetical protein PSYAP_24706 [Pseudomonas syringae pv. aptata
           str. DSM 50252]
          Length = 264

 Score =  118 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 54/179 (30%), Gaps = 29/179 (16%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            ++ +A+ ID  N  A+            L +      +      Y    G     +   
Sbjct: 9   SQKHLAVLIDADNAPAAI--------VEGLFEEIAKYGVASVKRIYGDWTGPQLGGWKK- 59

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSG 121
                           +  ++F    G    K++ D  L +DA +   +   +   + S 
Sbjct: 60  ---------VLLDYSIQPIQQFAYTKG----KNATDSSLIIDAMDLLYTRRFDGFCLVSS 106

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           D  FT L + L+ +   V       +     +       D F+ +  L+ EI      D
Sbjct: 107 DSDFTRLASRLREEGLTVYGFGEEKTPKPFVA-----ACDKFIYIELLREEITTPATGD 160


>gi|255065206|ref|ZP_05317061.1| conserved hypothetical protein [Neisseria sicca ATCC 29256]
 gi|255050627|gb|EET46091.1| conserved hypothetical protein [Neisseria sicca ATCC 29256]
          Length = 390

 Score =  118 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 52/178 (29%), Gaps = 30/178 (16%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
            +K+A+ ID  N  A            +LL+      I      Y        +      
Sbjct: 6   NKKLAVLIDADNAPADI--------IDRLLEEVAKYGIASVKRIYGDWSHGLSK------ 51

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122
                             ++F    G    K++ D+ L +DA +   S   +   I S D
Sbjct: 52  -----WKAALLPHAIIPVQQFAYTKG----KNATDMALVIDAMDLLYSGNFDGFCIVSSD 102

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
             FT L + L+     V              +  R+  D F+     + E  R   E 
Sbjct: 103 SDFTRLASRLRESGLTVYGFGEKK-----TPEAFRKACDKFIYTEIFRPEKQRQEKEK 155


>gi|66046764|ref|YP_236605.1| hypothetical protein Psyr_3535 [Pseudomonas syringae pv. syringae
           B728a]
 gi|63257471|gb|AAY38567.1| conserved hypothetical protein [Pseudomonas syringae pv. syringae
           B728a]
 gi|330973591|gb|EGH73657.1| hypothetical protein PSYAR_24186 [Pseudomonas syringae pv. aceris
           str. M302273PT]
          Length = 264

 Score =  118 bits (295), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 55/180 (30%), Gaps = 29/180 (16%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            ++ +A+ ID  N  A+            L +      +      Y    G     +   
Sbjct: 9   SQKHLAVLIDADNAPAAI--------VEGLFEEIAKYGVASVKRIYGDWTGPQLGGWKK- 59

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSG 121
                           +  ++F    G    K++ D  L +DA +   +   +   + S 
Sbjct: 60  ---------VLLDYSIQPIQQFAYTKG----KNATDSSLIIDAMDLLYTRRFDGFCLVSS 106

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
           D  FT L + L+ +   V       +     +       D F+ +  L+ EIA     D 
Sbjct: 107 DSDFTRLASRLREEGLTVYGFGEEKTPKPFVA-----ACDKFIYIELLREEIAVPASADP 161


>gi|294787818|ref|ZP_06753062.1| conserved hypothetical protein [Simonsiella muelleri ATCC 29453]
 gi|294484111|gb|EFG31794.1| conserved hypothetical protein [Simonsiella muelleri ATCC 29453]
          Length = 454

 Score =  118 bits (295), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 54/182 (29%), Gaps = 30/182 (16%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M    +K+A+ ID  N  A            ++L+      +      Y        +  
Sbjct: 1   MSTSNKKLAVLIDADNAPADI--------IDEMLEEIAKYGVASVKRIYGDWSHGLSK-- 50

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118
                                 ++F    G    K++ D+ L +DA +   S   +   I
Sbjct: 51  ---------WKATLLPHAIIPVQQFAYTKG----KNATDMALVIDAMDLLYSGNFDGFCI 97

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
            S D  FT L + L+     V              +  RR  D F+ +   + E      
Sbjct: 98  VSSDSDFTRLASRLRESGLTVYGFGEKK-----TPESFRRACDKFVYVEIFRPEKNLPKQ 152

Query: 179 ED 180
           ++
Sbjct: 153 KN 154


>gi|57234893|ref|YP_181094.1| hypothetical protein DET0347 [Dehalococcoides ethenogenes 195]
 gi|57225341|gb|AAW40398.1| conserved hypothetical protein [Dehalococcoides ethenogenes 195]
          Length = 194

 Score =  117 bits (294), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 67/173 (38%), Gaps = 9/173 (5%)

Query: 1   MFDPREKIALFIDGANLYASSKAL--GFDIDYRKLLKAFRSRAIVIRAYYYTT--VVGDP 56
           M D  E++ +FIDG+N+Y   K+     DID+         R  ++R YYY       + 
Sbjct: 1   MTDTLERVMIFIDGSNMYHYLKSHFQRTDIDFGCFCSKIAGRRRLVRIYYYNAEVGRKEE 60

Query: 57  EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLE 114
            ++F+             +  +      ++        +  +DV L+ D          +
Sbjct: 61  PERFNDQKKFFSSPEKISYMELRLGRLVYSGWPSTPPYEKGVDVLLSTDMLSHGFKNNFD 120

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
             ++ +GD  F + + A++   K V +           S +LR+ AD  + + 
Sbjct: 121 TAILVAGDSDFVSALQAVKDNGKNVEVALFGK---ETTSMELRKVADKTITID 170


>gi|302188168|ref|ZP_07264841.1| hypothetical protein Psyrps6_17563 [Pseudomonas syringae pv.
           syringae 642]
          Length = 264

 Score =  117 bits (294), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 28/178 (15%), Positives = 54/178 (30%), Gaps = 29/178 (16%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
           ++ +A+ ID  N  A+            L +      +      Y    G     +    
Sbjct: 10  QKHLAVLIDADNAPAAI--------VEGLFEEIAKYGVASVKRIYGDWTGPQLGGWKK-- 59

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122
                          +  ++F    G    K++ D  L +DA +   +   +   + S D
Sbjct: 60  --------VLLDYSIQPIQQFAYTKG----KNATDSSLIIDAMDLLYTRRFDGFCLVSSD 107

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
             FT L + L+ +   V       +     +       D F+ +  L+ EI      D
Sbjct: 108 SDFTRLASRLREEGLTVYGFGEEKTPKPFVA-----ACDKFIYIELLREEITTPASGD 160


>gi|317131070|ref|YP_004090384.1| protein of unknown function DUF88 [Ethanoligenens harbinense
           YUAN-3]
 gi|315469049|gb|ADU25653.1| protein of unknown function DUF88 [Ethanoligenens harbinense
           YUAN-3]
          Length = 255

 Score =  117 bits (294), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 49/170 (28%), Gaps = 29/170 (17%)

Query: 3   DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
               ++A+ ID  N+  S        +   +L+             Y          +  
Sbjct: 4   QQDMRLAVLIDAENVPYS--------NVTGMLEEITRYGTPTVKRIYGDWTTQNMSGWKN 55

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFS 120
           +                   +++    G    K+S D  + +DA +   +  ++   + S
Sbjct: 56  VLVPNA----------IVPVQQYCYTSG----KNSSDSAMIIDAMDILYAGKIDGFCLVS 101

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
            D  FT L   L+   KKV              D      D F+ L  + 
Sbjct: 102 SDSDFTRLATRLRESGKKVYGFGEKK-----TPDAFIAACDKFIYLEIIA 146


>gi|94500534|ref|ZP_01307065.1| hypothetical protein RED65_15728 [Oceanobacter sp. RED65]
 gi|94427324|gb|EAT12303.1| hypothetical protein RED65_15728 [Oceanobacter sp. RED65]
          Length = 157

 Score =  117 bits (293), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 13/165 (7%)

Query: 5   REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            + IA+F D  N+Y +++       +Y+ L++  ++  ++++A+ Y    G   Q     
Sbjct: 1   MKHIAVFADVQNIYYTTRDRFKRSFNYKALIEQLKNEGVIVQAHAYAIDRGIDSQ----- 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
               D L   GF V  K   +  +       K   DV + +D  E ++ +E +V+ SGDG
Sbjct: 56  IKFQDALRNMGFDVHLKPFIQRRDGSA----KGDWDVGITIDIMEAAKDVEEVVLLSGDG 111

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
            F  L+  ++   +     S V     + ++ L +  D F D+  
Sbjct: 112 DFAILLEHIRDHYQTT---SKVYGVEFLTANGLIKSCDVFRDIDE 153


>gi|258544860|ref|ZP_05705094.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826]
 gi|258519883|gb|EEV88742.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826]
          Length = 329

 Score =  117 bits (293), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 54/175 (30%), Gaps = 29/175 (16%)

Query: 1   MFDPRE-KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
           M   +  K+A+ ID  N  AS+           L        I      Y        Q 
Sbjct: 1   MNPEKPHKLAVLIDADNASASA--------VSGLFAEIAKYGIASVKRIYGDWSRPEPQG 52

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLV 117
           +     L                ++F    G    K + D+ L +DA E   S   +   
Sbjct: 53  WKKDVLLKHA---------LVPVQQFAYTTG----KDATDMCLIIDAMELLYSGIFDGFC 99

Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
           + S D  FT L   ++ +   V              +  R+  D F+ L  L++E
Sbjct: 100 LVSSDSDFTPLANHIRSRGLTVYGFG-----KRNTPEAFRQSCDRFIYLENLQDE 149


>gi|261364990|ref|ZP_05977873.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996]
 gi|288566793|gb|EFC88353.1| conserved hypothetical protein [Neisseria mucosa ATCC 25996]
          Length = 390

 Score =  117 bits (293), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 52/178 (29%), Gaps = 30/178 (16%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
            +K+A+ ID  N  A            +LL+      I      Y        +      
Sbjct: 6   NKKLAVLIDADNAPADI--------IDRLLEEVAKYGIASVKRIYGDWSHGLSK------ 51

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122
                             ++F    G    K++ D+ L +DA +   S   +   I S D
Sbjct: 52  -----WKAALLPHAIIPVQQFAYTKG----KNATDMALVIDAMDLLYSGNFDGFCIVSSD 102

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
             FT L + L+     V              +  R+  D F+     + E  R   E 
Sbjct: 103 SDFTRLASRLRESGLTVYGFGEKK-----TPEAFRKACDKFIYTEIFRPEKQRQEKEK 155


>gi|46200099|ref|YP_005766.1| hypothetical protein TTC1797 [Thermus thermophilus HB27]
 gi|55980158|ref|YP_143455.1| hypothetical protein TTHA0189 [Thermus thermophilus HB8]
 gi|46197727|gb|AAS82139.1| hypothetical conserved protein [Thermus thermophilus HB27]
 gi|55771571|dbj|BAD70012.1| conserved hypothetical protein [Thermus thermophilus HB8]
          Length = 181

 Score =  117 bits (292), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 40/187 (21%), Positives = 81/187 (43%), Gaps = 17/187 (9%)

Query: 5   REKIALFIDGANLYASSKAL---GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            E++A+FIDG+NLY          + +++ + +    +   ++RAYYY   +   +    
Sbjct: 1   MERVAIFIDGSNLYKGLVQHLGSDYRLNFVEFITLLTAGRKLLRAYYYNAPLPPEDPAAK 60

Query: 62  PLHPLLDWLHYNGF-QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVI 118
                L++L    +  V     +   +      V+  +D+++AVD    +     +  V+
Sbjct: 61  AHQSFLNYLKRVPYVTVRLGRLERRADGF----VEKGVDIQIAVDMLRLAFVNAYDIAVL 116

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL---KNEIAR 175
            SGDG F  +V  +Q   K+V       +  +++S +L +QAD+F  L      +     
Sbjct: 117 VSGDGDFAEVVRVVQDLGKQV----ENTTFHALSSHRLAQQADHFYPLDDFPWERLRAQV 172

Query: 176 DPDEDKK 182
            P   ++
Sbjct: 173 SPASPEE 179


>gi|218295249|ref|ZP_03496085.1| protein of unknown function DUF88 [Thermus aquaticus Y51MC23]
 gi|218244452|gb|EED10977.1| protein of unknown function DUF88 [Thermus aquaticus Y51MC23]
          Length = 180

 Score =  117 bits (292), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 42/175 (24%), Positives = 86/175 (49%), Gaps = 17/175 (9%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           +IALFIDG+ +Y ++K LG+++D+R+++  F +   +  A+YY  +    +++       
Sbjct: 2   RIALFIDGSYMYQAAKRLGWNVDHRRVITQFATPEQLYNAFYYVPITDPEDERQQR---F 58

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126
           +D L + G+ V +++ +           ++  +  +A D    +   +  V+ SG G   
Sbjct: 59  IDALVFMGYTVRSRLVR----------GEARFEAMMATDLLTTAPRWDRAVVASGSGELA 108

Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
               AL+   K+V ++        +A  +LR QAD F++LA  +  + R P   +
Sbjct: 109 HAFQALRAMGKEVHLL----GVHELADLELRNQADRFLNLAEWREVLERTPGGRR 159


>gi|317471517|ref|ZP_07930868.1| hypothetical protein HMPREF1011_01216 [Anaerostipes sp. 3_2_56FAA]
 gi|316901012|gb|EFV22975.1| hypothetical protein HMPREF1011_01216 [Anaerostipes sp. 3_2_56FAA]
          Length = 351

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 58/182 (31%), Gaps = 29/182 (15%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M +  ++ AL ID  N+  S+K        + +L        +     Y          +
Sbjct: 1   MENKEKRFALLIDADNI--SAKY------IKPILDELSQYGNITYKRIYGDWTSTLHASW 52

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVI 118
                                 ++F+   G    K++ D  + +DA +   +  ++   I
Sbjct: 53  KEELLANS----------ITPIQQFSYTQG----KNATDSAMIIDAMDILYANRVDGFCI 98

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
            S D  FT L + ++     V  +    + P       R+  D F +L  L  +      
Sbjct: 99  VSSDSDFTRLASRIRETGLTVIGMGEGKTPP-----AFRKACDVFTNLELLIEDKEEKES 153

Query: 179 ED 180
           + 
Sbjct: 154 KP 155


>gi|320103701|ref|YP_004179292.1| hypothetical protein Isop_2164 [Isosphaera pallida ATCC 43644]
 gi|319750983|gb|ADV62743.1| hypothetical protein Isop_2164 [Isosphaera pallida ATCC 43644]
          Length = 294

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 35/180 (19%), Positives = 65/180 (36%), Gaps = 24/180 (13%)

Query: 3   DPREKIALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
           +    +A+F+D  NL    +       +  K+L+    +  +I    Y          ++
Sbjct: 5   EHDRNLAVFVDLENLAMGFQNQKKARFEIHKVLERLVEKGKLIVKKAYA--------DWN 56

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVI 118
                    H    +++    +        +  K+S D+ L VDA + +     ++  VI
Sbjct: 57  RYQAYTAPFHEAAIELIEIPRR-------SQTGKNSADIRLVVDAMDLAWSKPHVDTFVI 109

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
            SGD  F+ LV+ L+   K V  +          S+ LR   D F+    L     +D  
Sbjct: 110 VSGDSDFSPLVSKLKENGKHVIGL----GMKGSTSELLRDNCDEFIYYEDL-ERQEQDEQ 164


>gi|17232331|ref|NP_488879.1| hypothetical protein alr4839 [Nostoc sp. PCC 7120]
 gi|17133976|dbj|BAB76538.1| alr4839 [Nostoc sp. PCC 7120]
          Length = 157

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 44/165 (26%), Positives = 84/165 (50%), Gaps = 13/165 (7%)

Query: 17  LYASSKALGFDIDYRKLLKAFRSRA---IVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYN 73
           ++ + +  G+  D R++L+ F++      +I A++YT +               D L   
Sbjct: 1   MFYAQQKNGWFFDPRRVLEYFKNEQSETTLINAFWYTGLKDP-----QDQRGFRDALISL 55

Query: 74  GFQVVAKVAKEFTE-NCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAAL 132
           G+ V  K+ KE+ + + GR   K+++D+E+ VD F   +  + +V+FSGDG F   +  L
Sbjct: 56  GYTVRTKILKEYCDDSSGRYSQKANLDIEIVVDMFNTVDQYDRVVLFSGDGDFERAIELL 115

Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
           + K   +T+VST      M + +LR   D ++DL  +++ I +  
Sbjct: 116 RSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDRIEKAE 156


>gi|219850544|ref|YP_002464977.1| hypothetical protein Cagg_3705 [Chloroflexus aggregans DSM 9485]
 gi|219544803|gb|ACL26541.1| protein of unknown function DUF88 [Chloroflexus aggregans DSM 9485]
          Length = 600

 Score =  116 bits (291), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 42/184 (22%), Positives = 77/184 (41%), Gaps = 22/184 (11%)

Query: 1   MFD-PREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58
           M+D  R  +A+FID  N+Y S +  L    ++  ++        V+ +  Y         
Sbjct: 1   MYDQKRPDVAVFIDFENIYVSVRDKLNATPNFEAIMDRCNDLGRVVISRAYA-------- 52

Query: 59  QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRV--KSSMDVELAVDAFEQS---EGL 113
            +     +   L+ N  + +      + ++ GR     K+S+D+ L +DA +       +
Sbjct: 53  DWYRYPRITSALYANAIEPIYVATYYYDKDAGRTGRAIKNSVDMNLCIDAMKTLYTNPNI 112

Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
              V+ +GD  F  LV ++++  K+V I+         AS  L + AD F+    L   I
Sbjct: 113 SRFVLVTGDRDFIPLVHSIRQHGKEVYIIGIG----GAASTHLAQSADEFVFYEQL---I 165

Query: 174 ARDP 177
            R P
Sbjct: 166 GRQP 169


>gi|329906041|ref|ZP_08274342.1| hypothetical protein IMCC9480_2751 [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327547373|gb|EGF32203.1| hypothetical protein IMCC9480_2751 [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 284

 Score =  116 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 37/169 (21%), Positives = 63/169 (37%), Gaps = 23/169 (13%)

Query: 9   ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           ALF D  N+    +   +   D RK+L+    +  ++    Y          +       
Sbjct: 11  ALFCDFENVALGVRDAKYAAFDIRKVLERLLLKGNIVVKKAYC--------DWDRYKDFK 62

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLEHLVIFSGDGC 124
             +H   F+++            R+  K+S D+ + VDA +       ++  VI SGD  
Sbjct: 63  AAMHEAAFELIEIPHV-------RQSGKNSADIRMVVDALDLCYTKAHVDTFVILSGDSD 115

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
           F+ LV+ L+   K+V  V          SD L    D F+    L   +
Sbjct: 116 FSPLVSKLRENNKRVIGV----GVKDSTSDLLSANCDEFIFYDDLVQVV 160


>gi|257094155|ref|YP_003167796.1| hypothetical protein CAP2UW1_2580 [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257046679|gb|ACV35867.1| conserved hypothetical protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 311

 Score =  116 bits (290), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 24/171 (14%), Positives = 50/171 (29%), Gaps = 29/171 (16%)

Query: 3   DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
           +P +++A+ ID  N   +            LL+             Y          +  
Sbjct: 53  EPTKRLAVLIDADNAQPAV--------IEALLEEIARFGEATVRRIYGDFTSPTSSSWKK 104

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
                        +   K  ++F    G    K++ D  + +DA +   +   +   + +
Sbjct: 105 FLN----------KHSIKPIQQFAYTTG----KNATDSTMIIDAMDLLYTRRFDGFCLVT 150

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
            D  FT L   L+ +  +V       +         R     F+    L+ 
Sbjct: 151 SDSDFTGLAVRLREEGLQVFGFGEQKTPEP-----FRNACHKFIFTEVLRK 196


>gi|222526169|ref|YP_002570640.1| hypothetical protein Chy400_2928 [Chloroflexus sp. Y-400-fl]
 gi|222450048|gb|ACM54314.1| protein of unknown function DUF88 [Chloroflexus sp. Y-400-fl]
          Length = 652

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 42/184 (22%), Positives = 77/184 (41%), Gaps = 22/184 (11%)

Query: 1   MFD-PREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58
           M+D  R  +A+FID  N+Y S +  L    ++  ++        V+ +  Y         
Sbjct: 1   MYDQKRPDVAVFIDFENIYVSVRDKLNATPNFEAIMDRCNDLGRVVISRAYA-------- 52

Query: 59  QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRV--KSSMDVELAVDAFEQS---EGL 113
            +     +   L+ N  + +      + ++ GR     K+S+D+ L +DA +       +
Sbjct: 53  DWYRYPRITSALYANAIEPIYVATYYYDKDAGRTGRAIKNSVDMNLCIDAMKTLYTNPNV 112

Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
              V+ +GD  F  LV ++++  K+V I+         AS  L + AD F+    L   I
Sbjct: 113 ARFVLVTGDRDFIPLVHSIRQHGKEVYIIGIG----GAASTHLAQSADEFVFYEQL---I 165

Query: 174 ARDP 177
            R P
Sbjct: 166 GRQP 169


>gi|163848259|ref|YP_001636303.1| hypothetical protein Caur_2709 [Chloroflexus aurantiacus J-10-fl]
 gi|163669548|gb|ABY35914.1| protein of unknown function DUF88 [Chloroflexus aurantiacus
           J-10-fl]
          Length = 669

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 42/184 (22%), Positives = 77/184 (41%), Gaps = 22/184 (11%)

Query: 1   MFD-PREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58
           M+D  R  +A+FID  N+Y S +  L    ++  ++        V+ +  Y         
Sbjct: 18  MYDQKRPDVAVFIDFENIYVSVRDKLNATPNFEAIMDRCNDLGRVVISRAYA-------- 69

Query: 59  QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRV--KSSMDVELAVDAFEQS---EGL 113
            +     +   L+ N  + +      + ++ GR     K+S+D+ L +DA +       +
Sbjct: 70  DWYRYPRITSALYANAIEPIYVATYYYDKDAGRTGRAIKNSVDMNLCIDAMKTLYTNPNV 129

Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
              V+ +GD  F  LV ++++  K+V I+         AS  L + AD F+    L   I
Sbjct: 130 ARFVLVTGDRDFIPLVHSIRQHGKEVYIIGIG----GAASTHLAQSADEFVFYEQL---I 182

Query: 174 ARDP 177
            R P
Sbjct: 183 GRQP 186


>gi|303232840|ref|ZP_07319524.1| conserved hypothetical protein [Atopobium vaginae PB189-T1-4]
 gi|302481030|gb|EFL44106.1| conserved hypothetical protein [Atopobium vaginae PB189-T1-4]
          Length = 260

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 39/193 (20%), Positives = 66/193 (34%), Gaps = 32/193 (16%)

Query: 1   MFD-PREKIALFIDGANLYASS---------KALGFDIDYRKLLKAFRSRAIVIRAYYYT 50
           M D P+  +A+FID  N    +         +      D + +      +  +     Y 
Sbjct: 1   MNDIPQRSLAVFIDYENFAYGAAGAAHKRTSRTHRKTPDMKSVFGRLVDKGRITVKRAYC 60

Query: 51  TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110
                    +      +  LH  G +++    +           K+S D+ LAVDA E  
Sbjct: 61  --------DWQRFKQDITPLHELGIELIEIPDR-------SSTGKNSADIRLAVDATEMC 105

Query: 111 ---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
              E ++   I SGD  F+ LVA L+   K V  +        + S  L    D F+   
Sbjct: 106 LTKEHIDTFAILSGDSDFSPLVAKLKEFGKTVIGI----GAEPITSSLLVEVCDEFIFYE 161

Query: 168 YLKNEIARDPDED 180
            +  +      +D
Sbjct: 162 DIVAQAGIPEFKD 174


>gi|254236844|ref|ZP_04930167.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|126168775|gb|EAZ54286.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
          Length = 164

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 57/148 (38%), Gaps = 14/148 (9%)

Query: 21  SKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAK 80
           ++     ++Y  L         ++ AY Y    GDP             L   GF V  K
Sbjct: 23  ARPTAAHLNYAALWADIARGGSIVEAYAYAIDRGDP-----RQQQFQQILRNLGFTVKLK 77

Query: 81  VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAA-LQRKVKKV 139
              +  +       K   DV + +D  + +  ++ +V+ SGDG F  L+   ++      
Sbjct: 78  PYIQRADGSA----KGDWDVGITIDVLDAAPRVDEVVLLSGDGDFDLLLEKVIRAHG--- 130

Query: 140 TIVSTVLSDPSMASDQLRRQADYFMDLA 167
            +V+T    P + ++ L R A  ++ + 
Sbjct: 131 -VVATAYGVPGLTANALIRAASRYVPIE 157


>gi|294670344|ref|ZP_06735227.1| hypothetical protein NEIELOOT_02063 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307948|gb|EFE49191.1| hypothetical protein NEIELOOT_02063 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 399

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 52/178 (29%), Gaps = 30/178 (16%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
            +K+A+ ID  N  A            +LL+      I      Y        +      
Sbjct: 6   NKKLAVLIDADNAPADI--------IDRLLEEIAKYGIASVKRIYGDWSHGLSK------ 51

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122
                             ++F    G    K++ D+ L +DA +   S   +   I S D
Sbjct: 52  -----WKAALLPHAIIPVQQFAYTKG----KNATDMALVIDAMDLLYSGNFDGFCIVSSD 102

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
             FT L + L+     V              +  R+  D F+     + E  R   E 
Sbjct: 103 SDFTRLASRLRESGLTVYGFGEKK-----TPEAFRKACDKFVYTEIFRPEKQRQEKEK 155


>gi|238059538|ref|ZP_04604247.1| hypothetical protein MCAG_00504 [Micromonospora sp. ATCC 39149]
 gi|237881349|gb|EEP70177.1| hypothetical protein MCAG_00504 [Micromonospora sp. ATCC 39149]
          Length = 367

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 41/174 (23%), Positives = 66/174 (37%), Gaps = 23/174 (13%)

Query: 3   DPREKIALFIDGANLYASSKAL--GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           D  ++IALF+D  NL   ++    G   D R +  A   R  V+    Y          +
Sbjct: 5   DHEDRIALFLDYENLALGAREHLGGMAFDLRPIADALAERGRVVVRRAYA--------DW 56

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLV 117
           S        L  +  +++    +           K++ D+++AVDA E +     +   V
Sbjct: 57  SFFDEDRRMLTRSHVELIEMPQRM------GASRKNAADIKMAVDAVELAFERAYVSTFV 110

Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
           I +GD  FT LV  L+   K+V  V          S  L    D F+    L+ 
Sbjct: 111 ICTGDSDFTPLVHKLRELNKRVIGV----GVEKSTSALLPPACDEFLYYDRLEG 160


>gi|167746693|ref|ZP_02418820.1| hypothetical protein ANACAC_01404 [Anaerostipes caccae DSM 14662]
 gi|167653653|gb|EDR97782.1| hypothetical protein ANACAC_01404 [Anaerostipes caccae DSM 14662]
          Length = 351

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 58/182 (31%), Gaps = 29/182 (15%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M +  ++ AL ID  N+  S+K        + +L        +     Y          +
Sbjct: 1   MENKEKRFALLIDADNI--SAKY------IKPILDELSQYGNITYKRIYGDWTSTLHASW 52

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVI 118
                                 ++F+   G    K++ D  + +DA +   +  ++   I
Sbjct: 53  KEELLANS----------ITPIQQFSYTQG----KNATDSAMIIDAMDILYTNRVDGFCI 98

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
            S D  FT L + ++     V  +    + P       R+  D F +L  L  +      
Sbjct: 99  VSSDSDFTRLASRIRETGLTVIGMGEGKTPP-----AFRKACDVFTNLELLIEDKEEKES 153

Query: 179 ED 180
           + 
Sbjct: 154 KP 155


>gi|320449117|ref|YP_004201213.1| hypothetical protein TSC_c00110 [Thermus scotoductus SA-01]
 gi|320149286|gb|ADW20664.1| hypothetical protein TSC_c00110 [Thermus scotoductus SA-01]
          Length = 181

 Score =  115 bits (289), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 40/183 (21%), Positives = 80/183 (43%), Gaps = 14/183 (7%)

Query: 5   REKIALFIDGANLYASS---KALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            E++A+FIDG+NLY          + +++ + +    +   ++RAYYY   +   +    
Sbjct: 1   MERVAIFIDGSNLYKGLVQHLGPDYRLNFVEFISLLTAGRRLLRAYYYNAPLPPEDPAAK 60

Query: 62  PLHPLLDWLHYNGFQ-VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVI 118
                L++L    +  V     +   +      V+  +D+++A+D    +  +  +  V+
Sbjct: 61  AHQSFLNYLKRVPYVAVRLGRLERRADGF----VEKGVDIQIAIDILRLAYADAYDVAVL 116

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
            SGDG F  +V  +Q   K+V       +  +++S +L +QAD F  L     E  R   
Sbjct: 117 VSGDGDFAEVVKVVQDMGKQV----ENTTFHALSSHRLAQQADRFYPLDDFPWERLRAQS 172

Query: 179 EDK 181
             +
Sbjct: 173 LPQ 175


>gi|225165594|ref|ZP_03727408.1| protein of unknown function DUF88 [Opitutaceae bacterium TAV2]
 gi|224800165|gb|EEG18581.1| protein of unknown function DUF88 [Opitutaceae bacterium TAV2]
          Length = 265

 Score =  115 bits (288), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 35/166 (21%), Positives = 62/166 (37%), Gaps = 23/166 (13%)

Query: 8   IALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           +A+F+D  N+   ++   F   D  K+ +    +  ++    Y          F      
Sbjct: 10  LAVFLDLENIARGAQDARFPQFDIGKVFERLLIKGNIVVKKAYC--------DFERYKDF 61

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDG 123
              LH   F+++            R+  K+S D+ + VDA +     + ++   I SGD 
Sbjct: 62  KRPLHEAAFELIEIPHV-------RQSGKNSADIRMVVDALDLCYTNDHVDAFAIISGDS 114

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
            F+ LV+ L+   K V  V       +  SD      D F+    L
Sbjct: 115 DFSPLVSKLRENGKTVIGV----GVKNSTSDLFIANCDEFIYYDDL 156


>gi|150008736|ref|YP_001303479.1| hypothetical protein BDI_2126 [Parabacteroides distasonis ATCC
           8503]
 gi|149937160|gb|ABR43857.1| conserved hypothetical protein [Parabacteroides distasonis ATCC
           8503]
          Length = 240

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 57/176 (32%), Gaps = 29/176 (16%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M    +K+A+ ID  N+  +        + + +L+      I+     Y          +
Sbjct: 1   MNSKEQKLAVLIDADNVPYA--------NIKGMLEEIAKYGILTIKRIYGDWTKPTVAGW 52

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVI 118
                                 ++++   G    K++ D  + +DA +   ++ ++   I
Sbjct: 53  KS----------ILLDYAITPIQQYSYTTG----KNATDSAMIIDAMDILHTDKVDGFCI 98

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
            S D  FT L   L+   K V  +    +             D F+ +  L  +I 
Sbjct: 99  VSSDSDFTRLAVRLRESGKFVLGMGEKKTPNP-----FIVSCDKFVYIEILGGDIK 149


>gi|119714385|ref|YP_921350.1| hypothetical protein Noca_0118 [Nocardioides sp. JS614]
 gi|119535046|gb|ABL79663.1| protein of unknown function DUF88 [Nocardioides sp. JS614]
          Length = 286

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 36/174 (20%), Positives = 58/174 (33%), Gaps = 30/174 (17%)

Query: 1   MFDPRE-KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
           M +P + ++A+ ID  N+ AS  A         LL       +      Y          
Sbjct: 1   MTEPADVRLAVLIDADNVSASHAA--------DLLAELARYGVPTVKRAYGDWTTQQLAG 52

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLV 117
           +               +   +  ++F    G    K+S D  L +DA +   S  L+   
Sbjct: 53  WKSELA----------RHAIQPIQQFANTVG----KNSTDSALIIDAMDLLYSGHLDAFA 98

Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
           I S D  FT L   L+   K V  +             L+   D F+ L  L++
Sbjct: 99  IVSSDSDFTRLATRLRESGKTVYGLG-----RRRTPASLQAACDKFIFLEVLRD 147


>gi|255536314|ref|YP_003096685.1| Maebl [Flavobacteriaceae bacterium 3519-10]
 gi|255342510|gb|ACU08623.1| Maebl [Flavobacteriaceae bacterium 3519-10]
          Length = 246

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 60/189 (31%), Gaps = 36/189 (19%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M D  +K+A+ ID  N+  +        +  ++L+             Y          +
Sbjct: 1   MTD--DKLAVLIDADNVPYA--------NVTQMLEEISRYGTPTIKRIYADWTKPTVSGW 50

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVI 118
                          +      ++++   G    K+S D  L +DA +   SE +    I
Sbjct: 51  K----------GVLLENAITPIQQYSYTTG----KNSSDSALIIDAMDILYSEKVTGFCI 96

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN-----EI 173
            S D  FT L   L+     V       +     S       D F+ L  LKN      +
Sbjct: 97  VSSDSDFTRLATRLREAGMTVIGFGEKKTPKPFIS-----ACDKFIYLEILKNTATETAV 151

Query: 174 ARDPDEDKK 182
            +   + K+
Sbjct: 152 EKKTAKPKR 160


>gi|302867482|ref|YP_003836119.1| hypothetical protein Micau_3012 [Micromonospora aurantiaca ATCC
           27029]
 gi|315506110|ref|YP_004084997.1| hypothetical protein ML5_5375 [Micromonospora sp. L5]
 gi|302570341|gb|ADL46543.1| protein of unknown function DUF88 [Micromonospora aurantiaca ATCC
           27029]
 gi|315412729|gb|ADU10846.1| protein of unknown function DUF88 [Micromonospora sp. L5]
          Length = 356

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 42/186 (22%), Positives = 70/186 (37%), Gaps = 24/186 (12%)

Query: 2   FDPREKIALFIDGANLYASSKAL--GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
            D  ++IALF+D  NL    +    G   D+R +  A   R  V+    Y          
Sbjct: 1   MDHEDRIALFLDYENLALGVRDHHGGRPFDFRPIADALAERGRVVVRRAYA--------D 52

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHL 116
           +S        L  +  +++    +           K++ D+++AVDA E +     +   
Sbjct: 53  WSYFDEDRRMLTRSHVELIEIPQRM------GASRKNAADIKMAVDAVELAFERGYISTF 106

Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
           VI +GD  FT LV  L+   K+V  V          S  L    D F+    L+  +   
Sbjct: 107 VICTGDSDFTPLVHKLRELNKRVIGV----GVEKSTSALLPPACDEFLYYDRLEG-VDVP 161

Query: 177 PDEDKK 182
           P   ++
Sbjct: 162 PPAARR 167


>gi|190576025|ref|YP_001973870.1| hypothetical protein Smlt4196 [Stenotrophomonas maltophilia K279a]
 gi|190013947|emb|CAQ47587.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a]
          Length = 259

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 53/171 (30%), Gaps = 29/171 (16%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M +P ++IAL ID  N  AS           ++L       +      Y        + +
Sbjct: 1   MSEPEKRIALLIDADNAPAS--------KIDEVLAEVARYGVANVRRAYGNWKSPRLKGW 52

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118
                          +   +  ++F  + G    K++  + + +DA +   +  L+   I
Sbjct: 53  ----------EAVLHEYAIRPIQQFAYSKG----KNASAMAMVIDAMDLLYARNLDGFAI 98

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
            S D  FT +V  L     KV       +               F  L  L
Sbjct: 99  VSSDADFTPMVMRLLTDGVKVYGFGEKKTPEP-----FVNACSKFTYLEAL 144


>gi|328952819|ref|YP_004370153.1| Domain of unknown function DUF88 [Desulfobacca acetoxidans DSM
           11109]
 gi|328453143|gb|AEB08972.1| Domain of unknown function DUF88 [Desulfobacca acetoxidans DSM
           11109]
          Length = 297

 Score =  115 bits (288), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 40/164 (24%), Positives = 79/164 (48%), Gaps = 12/164 (7%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRS-RAIVIRAYYYTTVVGDP---EQQF 60
             KI +++D  N+    +  G+ + Y  L +        ++R   Y  +  +    +  +
Sbjct: 28  MSKIGVYVDSMNI---VRNGGYGMRYEVLRRFATRNGGQIVRLNAYVALDEERVGADPNY 84

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           +     +  L   GF+V+ K  + FT+  GR   K++ D+++A+D   QS+ L+ +++ +
Sbjct: 85  NATLNFISTLRDLGFKVIEKPIRWFTDESGRTYGKANADMDMALDIISQSDRLDMVLLLT 144

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
           GDG F  +V  +Q K  +V +V+         S  LRR+ D F+
Sbjct: 145 GDGDFCNVVTMVQNKGCRVELVAFA-----NVSSWLRREVDLFV 183


>gi|327404779|ref|YP_004345617.1| hypothetical protein Fluta_2799 [Fluviicola taffensis DSM 16823]
 gi|327320287|gb|AEA44779.1| hypothetical protein Fluta_2799 [Fluviicola taffensis DSM 16823]
          Length = 250

 Score =  115 bits (287), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 60/181 (33%), Gaps = 29/181 (16%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
             +K+A+ ID  N+  SS         +++L+             Y          +   
Sbjct: 2   NEQKMAVLIDADNVPYSS--------IKEMLEEVAKTGTPTIKRIYADWTKPNANGWK-- 51

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSG 121
                       +      ++++   G    K+S D  L +DA +   S+ ++   I S 
Sbjct: 52  --------GVLLENAITPIQQYSYTSG----KNSSDSALIIDAMDILYSQQVDGFCIVSS 99

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
           D  FT L   L+   KKV  +    +             D F+ +  LK +      E K
Sbjct: 100 DSDFTRLATRLRESGKKVMGIGEKKTPLP-----FITACDKFVYIEILKPKPIPSKTETK 154

Query: 182 K 182
           +
Sbjct: 155 Q 155


>gi|197123307|ref|YP_002135258.1| hypothetical protein AnaeK_2905 [Anaeromyxobacter sp. K]
 gi|196173156|gb|ACG74129.1| protein of unknown function DUF88 [Anaeromyxobacter sp. K]
          Length = 253

 Score =  114 bits (286), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 59/168 (35%), Gaps = 22/168 (13%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
               ++IALFID  NL   +       D +  L     +  V+    Y          ++
Sbjct: 4   EHSDQRIALFIDFENLVTRTGLSAETFDLQPALDTLLEKGKVVYRRAYA--------DWT 55

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVI 118
                   LH  G ++V             +  K+  D+ L +DA E +   E ++  VI
Sbjct: 56  RFSAATPRLHEKGVELVDVP-------PSTRAGKNGADMRLVIDALELAYLREHIDTFVI 108

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
            SGD  F  L   L+   + V  ++         S    +  D F+ L
Sbjct: 109 ASGDSDFCPLAYKLRENDRTVIGMA----VREATSPLFVKACDEFIYL 152


>gi|317407351|gb|EFV87317.1| hypothetical protein HMPREF0005_05421 [Achromobacter xylosoxidans
           C54]
          Length = 170

 Score =  114 bits (286), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 41/177 (23%), Positives = 64/177 (36%), Gaps = 23/177 (12%)

Query: 9   ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           ALF D  N+    +   +   D R +L+    +  ++    Y          +       
Sbjct: 11  ALFCDFENVALGVRDTKYQKFDIRPVLERLLLKGSIVVKKAYC--------DWERYKEFK 62

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGC 124
             +H   F+++            R+  K+S D+ L VDA +       +   VI SGD  
Sbjct: 63  APMHEANFELIEIPHV-------RQSGKNSADIRLVVDALDFCYTKSHVNTFVIISGDSD 115

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
           F+ LV+ L+   KKV  V          SD L    D F+    L  E  R  D  +
Sbjct: 116 FSPLVSKLRENDKKVIGV----GVKQSTSDLLIANCDEFIFYDDLAREGQRAADARR 168


>gi|114778764|ref|ZP_01453574.1| hypothetical protein SPV1_03033 [Mariprofundus ferrooxydans PV-1]
 gi|114551015|gb|EAU53578.1| hypothetical protein SPV1_03033 [Mariprofundus ferrooxydans PV-1]
          Length = 277

 Score =  114 bits (286), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 65/171 (38%), Gaps = 23/171 (13%)

Query: 9   ALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           AL+ D  N+    + +  D  D +++L+    +  ++    Y          ++      
Sbjct: 11  ALYCDFENVALGVRDIKLDAFDIQRVLERLLLKGNIVVKKAYC--------DWARYKDFK 62

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLEHLVIFSGDGC 124
             +H   F+++            R+  K+S D+ + VDA +       ++  VI SGD  
Sbjct: 63  APMHEAAFELIEIPHV-------RQSGKNSADIRMVVDALDLCYTKAHVDTFVIISGDSD 115

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
           F+ LV+ L+   K V  V          SD L    D F+    L  +  +
Sbjct: 116 FSPLVSKLRENNKLVIGV----GVKQSTSDLLIANCDEFIYYDDLVRDSEK 162


>gi|220918096|ref|YP_002493400.1| protein of unknown function DUF88 [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|219955950|gb|ACL66334.1| protein of unknown function DUF88 [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 253

 Score =  114 bits (286), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 59/168 (35%), Gaps = 22/168 (13%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
               ++IALFID  NL   +       D +  L     +  V+    Y          ++
Sbjct: 4   EHSDQRIALFIDFENLVTRTGLSAETFDLQPALDTLLEKGKVVYRRAYA--------DWT 55

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVI 118
                   LH  G ++V             +  K+  D+ L +DA E +   E ++  VI
Sbjct: 56  RFSAATPRLHEKGVELVDVP-------PSTRAGKNGADMRLVIDALELAYLREHIDTFVI 108

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
            SGD  F  L   L+   + V  ++         S    +  D F+ L
Sbjct: 109 ASGDSDFCPLAYKLRENDRTVIGMA----VREATSPLFVKACDEFIYL 152


>gi|313679213|ref|YP_004056952.1| hypothetical protein Ocepr_0319 [Oceanithermus profundus DSM 14977]
 gi|313151928|gb|ADR35779.1| protein of unknown function DUF88 [Oceanithermus profundus DSM
           14977]
          Length = 173

 Score =  114 bits (286), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 12/169 (7%)

Query: 5   REKIALFIDGANLYA---SSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            E++A+FIDG+NLY    S+    + +D+ K ++   +   ++RAYYY   +   +    
Sbjct: 1   MERVAIFIDGSNLYKGLVSTLGSEYRLDFVKFIETLVAGRKLLRAYYYNAPLPTEDAASR 60

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIF 119
                L++L    +  V     E     G   V+  +D+++AVD    +     +  V+ 
Sbjct: 61  AHQSFLNYLKRVPYVSVRLGRLERR---GDTFVEKGVDIQIAVDMLRLAYARAYDVGVLV 117

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
           SGDG F  +V  +Q    +V   +      +++S +L +QAD F  L  
Sbjct: 118 SGDGDFAEVVRVIQDMGMQVENATFH----ALSSYRLAQQADRFYPLDE 162


>gi|262189634|ref|ZP_06048020.1| hypothetical protein VIH_000054 [Vibrio cholerae CT 5369-93]
 gi|262034486|gb|EEY52840.1| hypothetical protein VIH_000054 [Vibrio cholerae CT 5369-93]
          Length = 145

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 15/154 (9%)

Query: 17  LYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGF 75
           +Y + +   G   DY +          V++A  Y     DP+Q           L   G 
Sbjct: 1   MYYTCREQYGRHFDYNQFWSQVTQNRTVVKANAYAIASKDPQQ-----RQFHHILRGIGL 55

Query: 76  QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAAL-QR 134
           +V+ K   + ++       K   DV +A+D +E ++ ++ +V+ SGDG F  LV  + QR
Sbjct: 56  EVMLKPFIQRSDGSA----KGDWDVGIALDGYELAQEVDTVVLVSGDGDFEPLVTRIAQR 111

Query: 135 KVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
              KV +       P + +  L   A  F  + +
Sbjct: 112 FQVKVEV----YGVPKLTAQHLIDVASQFHPIEH 141


>gi|195953568|ref|YP_002121858.1| protein of unknown function DUF88 [Hydrogenobaculum sp. Y04AAS1]
 gi|195933180|gb|ACG57880.1| protein of unknown function DUF88 [Hydrogenobaculum sp. Y04AAS1]
          Length = 176

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 48/184 (26%), Positives = 84/184 (45%), Gaps = 15/184 (8%)

Query: 1   MFDPREK--IALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
           M  P  +    +FIDG NLY   K  L F +D  KL++ F +   +   ++Y     + E
Sbjct: 2   MLVPNSRKIAGIFIDGTNLYFVQKQFLDFKVDILKLVRYFANYFAIYNTFFYLAYKEEEE 61

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLV 117
           +Q      L     + G  V+ K  K+  +      +K ++DV+LA+D     +  +  +
Sbjct: 62  KQNKFYRMLT----FGGVTVIKKAVKQLKDGS----MKGNLDVDLAMDCLLTKDNYDVAI 113

Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
           + +GD  F  L+  L+   K++ +VST  S    +S +L    D F++L  L   I  + 
Sbjct: 114 LVTGDSDFEKLINILRTFGKQIIVVSTKDS----SSIELVNICDLFVELKDLAPFIKLEE 169

Query: 178 DEDK 181
            E +
Sbjct: 170 HEKQ 173


>gi|218245522|ref|YP_002370893.1| hypothetical protein PCC8801_0650 [Cyanothece sp. PCC 8801]
 gi|257058559|ref|YP_003136447.1| hypothetical protein Cyan8802_0670 [Cyanothece sp. PCC 8802]
 gi|218166000|gb|ACK64737.1| protein of unknown function DUF88 [Cyanothece sp. PCC 8801]
 gi|256588725|gb|ACU99611.1| protein of unknown function DUF88 [Cyanothece sp. PCC 8802]
          Length = 234

 Score =  114 bits (286), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 51/175 (29%), Gaps = 28/175 (16%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
               +++A+ ID  N+ AS            LL+             Y     +    + 
Sbjct: 6   LSSNKRLAVLIDADNVSASV--------IEALLQEIAKYGTANVKRIYGDWTSNQLNSWK 57

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIF 119
                         +   +  ++F    G    K+S D  L +DA +   +   +   + 
Sbjct: 58  NQLN----------KFAIQPMQQFKYTMG----KNSTDSALIIDAMDLLYTGNFDGFCLV 103

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
           S D  FT L + ++     V                     + F+    L+N+  
Sbjct: 104 SSDSDFTRLASRIRESGLIVYGFGE----KQKTPSAFVVACNKFIYTDILENQQT 154


>gi|224371038|ref|YP_002605202.1| hypothetical protein HRM2_39800 [Desulfobacterium autotrophicum
           HRM2]
 gi|223693755|gb|ACN17038.1| hypothetical protein HRM2_39800 [Desulfobacterium autotrophicum
           HRM2]
          Length = 236

 Score =  114 bits (285), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 58/182 (31%), Gaps = 29/182 (15%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M +  +KIALFID  N  AS         +  +L       +V     Y        + +
Sbjct: 1   MNESTQKIALFIDADNAPAS--------KFEDVLSEVAKYGVVTIRKAYGNWKNPCLKSW 52

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVI 118
                          +   +  +++    G    K++ D+ L +DA +   ++ ++ +  
Sbjct: 53  ----------EELLHEYAIQPIQQYDLTKG----KNASDIALVIDAMDVMYTKNIDVMCF 98

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
            S D  FT +V     + K V       +               F+ L     +    P 
Sbjct: 99  VSSDCDFTPMVTRALAEGKVVLGFGERKAPSP-----FVNACSKFLFLDQEPEQNGTTPK 153

Query: 179 ED 180
           + 
Sbjct: 154 KT 155


>gi|73748197|ref|YP_307436.1| hypothetical protein cbdb_A289 [Dehalococcoides sp. CBDB1]
 gi|147668972|ref|YP_001213790.1| hypothetical protein DehaBAV1_0326 [Dehalococcoides sp. BAV1]
 gi|289432247|ref|YP_003462120.1| hypothetical protein DehalGT_0297 [Dehalococcoides sp. GT]
 gi|73659913|emb|CAI82520.1| conserved hypothetical protein [Dehalococcoides sp. CBDB1]
 gi|146269920|gb|ABQ16912.1| protein of unknown function DUF88 [Dehalococcoides sp. BAV1]
 gi|288945967|gb|ADC73664.1| protein of unknown function DUF88 [Dehalococcoides sp. GT]
          Length = 194

 Score =  114 bits (285), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 67/173 (38%), Gaps = 9/173 (5%)

Query: 1   MFDPREKIALFIDGANLYASSKAL--GFDIDYRKLLKAFRSRAIVIRAYYYTT--VVGDP 56
           M D  E++ +FIDG+N+Y   K+     DID+            ++R YYY       + 
Sbjct: 1   MTDTLERVMIFIDGSNMYHYLKSHFQRTDIDFGCFCSKIAGHRRLVRIYYYNAEVGRKEE 60

Query: 57  EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLE 114
            ++F+        L    +  +      ++        +  +DV L+ D          +
Sbjct: 61  PERFNDQKKFFTSLEKIPYMELRLGRLVYSGWPATPPYEKGVDVLLSTDMLSHGFKNNFD 120

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
             ++ +GD  F + + A++   K V +           S +LR+ AD  + + 
Sbjct: 121 TAILVAGDSDFVSALQAVKDNGKNVEVALFGK---ESTSVELRKVADKIIAVD 170


>gi|308233771|ref|ZP_07664508.1| hypothetical protein AvagD15_01897 [Atopobium vaginae DSM 15829]
 gi|328943670|ref|ZP_08241135.1| hypothetical protein HMPREF0091_10360 [Atopobium vaginae DSM 15829]
 gi|327491639|gb|EGF23413.1| hypothetical protein HMPREF0091_10360 [Atopobium vaginae DSM 15829]
          Length = 260

 Score =  114 bits (285), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 39/193 (20%), Positives = 69/193 (35%), Gaps = 32/193 (16%)

Query: 1   MFDPREK-IALFIDGANLYASSKAL---------GFDIDYRKLLKAFRSRAIVIRAYYYT 50
           M D  ++ IA+FID  N  A + A              + + +      +  +     Y 
Sbjct: 1   MSDINQRSIAVFIDYENFAAGAGASKNKASAHGKRTQPNMKCVFSRLVDKGRITLKRAYC 60

Query: 51  TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110
                    +      +  LH  G +++    +           K+S D+ LAVDA E  
Sbjct: 61  --------DWQRFKQDVTPLHELGIELIEIPDR-------SSTGKNSADIRLAVDATEMC 105

Query: 111 ---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
              + ++  VI SGD  F+ LV+ L+   K V  +        + S  L    D F+   
Sbjct: 106 LTKDHIDTFVILSGDSDFSPLVSKLKEFGKTVIGI----GAKPITSSLLVEVCDEFIFYE 161

Query: 168 YLKNEIARDPDED 180
            + ++      +D
Sbjct: 162 DILSQAGIPEFKD 174


>gi|110637857|ref|YP_678064.1| hypothetical protein CHU_1453 [Cytophaga hutchinsonii ATCC 33406]
 gi|110280538|gb|ABG58724.1| conserved hypothetical protein [Cytophaga hutchinsonii ATCC 33406]
          Length = 258

 Score =  114 bits (285), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 58/187 (31%), Gaps = 35/187 (18%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
             +K+A+ ID  N+  S        + +++L+             Y          +   
Sbjct: 14  KEDKLAVLIDADNVPYS--------NVKEMLEEISKNGTPTIKRIYADWTKPTVSGWKS- 64

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSG 121
                       +      ++++   G    K+S D  L +DA +   S  +    I S 
Sbjct: 65  ---------VLLENAITPIQQYSYTTG----KNSSDSALIIDAMDILYSGKVNGFCIVSS 111

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK------NEIAR 175
           D  FT L   L+     V       +     S       D F+ +  LK        I +
Sbjct: 112 DSDFTRLATRLREAGMTVIGFGEKKTPKPFIS-----ACDKFIYIEILKASSVETKVITK 166

Query: 176 DPDEDKK 182
             ++ KK
Sbjct: 167 PDEKLKK 173


>gi|254225637|ref|ZP_04919245.1| protein of unknown function [Vibrio cholerae V51]
 gi|125621852|gb|EAZ50178.1| protein of unknown function [Vibrio cholerae V51]
          Length = 259

 Score =  114 bits (285), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 31/172 (18%), Positives = 56/172 (32%), Gaps = 29/172 (16%)

Query: 3   DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
           +  +KIA+ ID  N   +            +LK       ++    Y     D  + +  
Sbjct: 5   NSEKKIAVLIDAENAQYAVLDY--------VLKELSKHGHILVKKAYADWSSDCLKNWKQ 56

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
                        ++     ++F+   G    K+S D  + +DA +   S+  +   + S
Sbjct: 57  PLN----------ELAINPIQQFSYTQG----KNSSDAAMIIDAMDLLYSDKYDAFALIS 102

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
            D  FT L + L+     V  V              R   D F+    LK+ 
Sbjct: 103 SDSDFTKLASRLKESEIYVFGVGEKK-----TPIAFRNACDDFIYTEVLKDR 149


>gi|319788348|ref|YP_004147823.1| hypothetical protein Psesu_2765 [Pseudoxanthomonas suwonensis 11-1]
 gi|317466860|gb|ADV28592.1| hypothetical protein Psesu_2765 [Pseudoxanthomonas suwonensis 11-1]
          Length = 250

 Score =  114 bits (285), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 55/171 (32%), Gaps = 29/171 (16%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M +P ++IAL ID  N  AS       ID   +L       +      Y        + +
Sbjct: 1   MAEPEKRIALLIDADNAPAS------KIDL--VLAEVARHGVANVRRAYGNWKSPNLKGW 52

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118
                          +   +  ++F  + G    K++ D+ + +DA +   +  L+   I
Sbjct: 53  ----------EAVLHEYAIRPIQQFAYSSG----KNASDMAMVIDAMDLLYARNLDGFAI 98

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
            S D  FT LV  L     KV       +               F  +  L
Sbjct: 99  VSSDADFTPLVMRLLTDGMKVYGFGEKKTPSP-----FVNACSKFTYVEAL 144


>gi|218296000|ref|ZP_03496780.1| protein of unknown function DUF88 [Thermus aquaticus Y51MC23]
 gi|218243738|gb|EED10266.1| protein of unknown function DUF88 [Thermus aquaticus Y51MC23]
          Length = 181

 Score =  113 bits (284), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 38/169 (22%), Positives = 76/169 (44%), Gaps = 12/169 (7%)

Query: 5   REKIALFIDGANLYASSKAL---GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            E++A+FIDG+NLY          + +++ + +    +   ++RAYYY   +   +    
Sbjct: 1   MERVAIFIDGSNLYKGLVQHLGSDYRLNFVEFITLLTAGRKLLRAYYYNAPLPPEDPAAK 60

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIF 119
                L++L    +  V     E         V+  +D+++A+D    +  +  +  ++ 
Sbjct: 61  AHQSFLNYLKRVPYVAVRLGRLERR---AEGFVEKGVDIQIAIDILRLAYADAYDIAILV 117

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
           SGDG F  +V  +Q   K+V       +  +++S +L +QAD F  L  
Sbjct: 118 SGDGDFAEVVRVVQDMGKQV----ENTTFHALSSHRLAQQADRFYPLDD 162


>gi|270307718|ref|YP_003329776.1| hypothetical protein DhcVS_287 [Dehalococcoides sp. VS]
 gi|270153610|gb|ACZ61448.1| hypothetical protein DhcVS_287 [Dehalococcoides sp. VS]
          Length = 194

 Score =  113 bits (284), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 35/173 (20%), Positives = 68/173 (39%), Gaps = 9/173 (5%)

Query: 1   MFDPREKIALFIDGANLYASSKAL--GFDIDYRKLLKAFRSRAIVIRAYYYTT--VVGDP 56
           M D  E++ +FIDG+N+Y   K+     DID+         R  ++R YYY       + 
Sbjct: 1   MTDTLERVMIFIDGSNMYHYLKSHFQRTDIDFGCFCSKIAGRRRLVRIYYYNAEVGRKEE 60

Query: 57  EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLE 114
            ++F+        L    +  +      ++        +  +DV L+ D          +
Sbjct: 61  PERFNDQRKFFTSLEKISYMELRLGRLVYSGWPSTPPYEKGVDVLLSTDMLSHGFKNNFD 120

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
             ++ +GD  F + + A++   K V +           S +LR+ AD  + + 
Sbjct: 121 TAILVAGDSDFVSALQAVKDNGKNVEVALFGK---ERTSMELRKVADKIIAVD 170


>gi|312962938|ref|ZP_07777425.1| protein of unknown function DUF88 [Pseudomonas fluorescens WH6]
 gi|311282965|gb|EFQ61559.1| protein of unknown function DUF88 [Pseudomonas fluorescens WH6]
          Length = 246

 Score =  113 bits (284), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 52/167 (31%), Gaps = 29/167 (17%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           ++A+ ID  N  +S          ++LL+             Y          +      
Sbjct: 17  RLAVLIDADNASSSV--------VKELLEEVAKYGTATVKRAYGDWTTQHLVGWKGHLH- 67

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124
                    +   +  ++F    G    K+S D    +DA +   ++ ++   I S D  
Sbjct: 68  ---------KHAIQPIQQFAYTQG----KNSTDSAFIIDAMDLLYADNVDGFCIVSSDSD 114

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
           FT L   L+   K+V  +           D      D F+    LK 
Sbjct: 115 FTRLATRLREAGKRVYGLGERK-----TPDAFIGACDKFIFFEVLKK 156


>gi|171909553|ref|ZP_02925023.1| hypothetical protein VspiD_00235 [Verrucomicrobium spinosum DSM
           4136]
          Length = 312

 Score =  113 bits (284), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 71/188 (37%), Gaps = 26/188 (13%)

Query: 1   MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
           M  P      A+++D  N+   ++   +  +D +K+++    +  ++    Y        
Sbjct: 44  MIPPNNNATMAVYLDLENIVLGAQEARYPKVDIQKIMERLLLKGHIVTKKAYC------- 96

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLE 114
             +         LH   ++++            R+  K+S D+ + VDA +       ++
Sbjct: 97  -DWERYKDFKRPLHEAAYELIEIPHV-------RQSGKNSADIRMVVDALDLCYTKGHVD 148

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL-KNEI 173
             VI SGD  F+ LV+ L+   K V  +       +  S+      D F+    L + E 
Sbjct: 149 TFVIISGDSDFSPLVSKLRENAKTVIGM----GVKNSTSNLFITNCDEFIYYDDLVRKEQ 204

Query: 174 ARDPDEDK 181
           +R     K
Sbjct: 205 SRASRSTK 212


>gi|225023600|ref|ZP_03712792.1| hypothetical protein EIKCOROL_00460 [Eikenella corrodens ATCC
           23834]
 gi|224943482|gb|EEG24691.1| hypothetical protein EIKCOROL_00460 [Eikenella corrodens ATCC
           23834]
          Length = 392

 Score =  113 bits (283), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 51/180 (28%), Gaps = 30/180 (16%)

Query: 3   DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
           D + ++A+ ID  N  A            +LL+      I      Y        +    
Sbjct: 5   DQQARLAVLIDADNAPADI--------IDRLLEEIAKYGIASVKRIYGDWSHGLSK---- 52

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
                               ++F    G    K++ D+ L +DA +   S   +   I S
Sbjct: 53  -------WKAALLPHAIIPVQQFAYTKG----KNATDMALVIDAMDLLYSGNFDGFCIVS 101

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
            D  FT L + L+     V                 R+  D F+       E  R   E 
Sbjct: 102 SDSDFTRLASRLRESGLTVYGFGEKK-----TPTAFRKACDKFIYTEIFLPEKQRAHKER 156


>gi|260774799|ref|ZP_05883701.1| hypothetical protein VIC_000167 [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260609224|gb|EEX35379.1| hypothetical protein VIC_000167 [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 259

 Score =  113 bits (283), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 31/172 (18%), Positives = 54/172 (31%), Gaps = 29/172 (16%)

Query: 3   DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
           D  +KIA+ ID  N   +            +LK       ++    Y     +  + +  
Sbjct: 5   DSEKKIAVLIDAENAQYAVLDF--------VLKELSKHGHILVKKAYGDWSSECLKNWKQ 56

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
                        ++     ++F+   G    K+S D  + +DA +   S   +   + S
Sbjct: 57  PLN----------ELAINPIQQFSYTQG----KNSSDAAMIIDAMDLLYSNKYDAFALIS 102

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
            D  FT L + L+     V  V              R   D F+    LK  
Sbjct: 103 SDSDFTKLASRLKESQIYVFGVGEKK-----TPLAFRNACDDFIYTEVLKER 149


>gi|194334672|ref|YP_002016532.1| hypothetical protein Paes_1873 [Prosthecochloris aestuarii DSM 271]
 gi|194312490|gb|ACF46885.1| conserved hypothetical protein [Prosthecochloris aestuarii DSM 271]
          Length = 252

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 56/182 (30%), Gaps = 29/182 (15%)

Query: 3   DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
           +  +++A+ ID  N  AS            LL       +      Y        + +  
Sbjct: 4   EKSQRLAVLIDADNTQASI--------IDGLLSEIAKYGVASVRRIYGDWTSPLLKGWK- 54

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
                        +   +  ++F    G    K++ D  + +DA +   +   +   I S
Sbjct: 55  ---------EILLEHSIQPIQQFGYTKG----KNATDSAMIIDAMDLLYTGKFDGFCIVS 101

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
            D  FT L + ++     V       +     S       D F+ +  L+  +  +    
Sbjct: 102 SDSDFTKLASRIRESGLFVFGFGEKKTPSPFVS-----ACDKFIYIEVLRARVNENEAIK 156

Query: 181 KK 182
           +K
Sbjct: 157 RK 158


>gi|237808105|ref|YP_002892545.1| hypothetical protein Tola_1344 [Tolumonas auensis DSM 9187]
 gi|237500366|gb|ACQ92959.1| protein of unknown function DUF88 [Tolumonas auensis DSM 9187]
          Length = 277

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 54/181 (29%), Gaps = 29/181 (16%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            +P  ++A+ ID  N  AS            LLK   S         Y         Q+ 
Sbjct: 13  EEPTLRLAVLIDADNAQASV--------IDGLLKEVASFGEATVKRIYGDFTSPASSQWK 64

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIF 119
            +            Q   K  ++F    G    K++ D  L +DA +   +   +   + 
Sbjct: 65  KVLN----------QYAIKPVQQFAYTTG----KNATDSTLIIDAMDLLYTRRFDGFCLV 110

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
           S D  FT L   ++ +   +              D  R     F+   YL+  +      
Sbjct: 111 SSDSDFTGLALRIREEGLTIVGFGEQK-----TPDAFRNACHKFIFTEYLRPTVQAPEVS 165

Query: 180 D 180
            
Sbjct: 166 P 166


>gi|159899759|ref|YP_001546006.1| hypothetical protein Haur_3241 [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159892798|gb|ABX05878.1| protein of unknown function DUF88 [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 789

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 39/191 (20%), Positives = 77/191 (40%), Gaps = 21/191 (10%)

Query: 1   MFDPREKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
           M  P++ +A+FID  N+Y S +       ++  L++       V+ A  Y          
Sbjct: 29  MNKPKQDVAVFIDFENIYVSVREKFDATPNFEALMERCEDYGRVVVARAYA--------D 80

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGR--KRVKSSMDVELAVDAFEQS---EGLE 114
           +     +   L  N  + +      + ++ GR  + +K+S+D+ + +DA         + 
Sbjct: 81  WYRYPRITSALFANNIEPMYVPTYYYDKDEGRMGRPIKNSVDMHMCIDAMRTLYTRTNIG 140

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA---YLKN 171
             +  +GD  F  LV  ++++ K V IV         AS  L + AD F+       ++ 
Sbjct: 141 SYIFITGDRDFIALVNCVRQEGKDVIIVGIG----GAASSHLAQSADEFLFYEQIVDIRP 196

Query: 172 EIARDPDEDKK 182
              R  +  +K
Sbjct: 197 MGGRRNERHEK 207


>gi|256824346|ref|YP_003148306.1| hypothetical protein Ksed_04690 [Kytococcus sedentarius DSM 20547]
 gi|256687739|gb|ACV05541.1| uncharacterized conserved protein [Kytococcus sedentarius DSM
           20547]
          Length = 412

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 66/183 (36%), Gaps = 23/183 (12%)

Query: 5   REKIALFIDGANLYASSKAL--GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
            ++IALF+D  NL   ++    G   D + +  A   R  V+    Y          +S 
Sbjct: 3   EDRIALFVDYENLALGARDHLGGMTFDLKPIADALAERGRVVVRRAYA--------DWSY 54

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIF 119
                  L  +  +++    +           K++ D+++ VDA E +     +    I 
Sbjct: 55  FDEDRRMLTRSHVELIEMPQRM------GASRKNAADIKMVVDAIEMAFERGYITTFAIC 108

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
           +GD  FT LV  L+   K V  V       +  S  L    D F+    L       P +
Sbjct: 109 TGDSDFTPLVHKLRELNKNVIGV----GVRNSTSAMLPPSCDEFLFYDTLDGVDPHTPAK 164

Query: 180 DKK 182
           + K
Sbjct: 165 ETK 167


>gi|309789837|ref|ZP_07684416.1| hypothetical protein OSCT_0367 [Oscillochloris trichoides DG6]
 gi|308228141|gb|EFO81790.1| hypothetical protein OSCT_0367 [Oscillochloris trichoides DG6]
          Length = 635

 Score =  113 bits (283), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 78/185 (42%), Gaps = 23/185 (12%)

Query: 1   MFDPREK--IALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
           M    ++  +A+FID  N+Y S +  L  + ++  ++        V+ +  Y        
Sbjct: 1   MSYENKRPDVAVFIDFENVYVSVRDKLNANPNFEAIMDRCGDLGRVVISRAYA------- 53

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRV--KSSMDVELAVDAFEQS---EG 112
             +     +   L+ N  + +      + ++ GR     K+S+D+ L +DA +       
Sbjct: 54  -DWYRYPRVTSALYANAIEPIYVATYYYDKDMGRTGRAIKNSVDMNLCIDAMKTLFTNTN 112

Query: 113 LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
           +   V+ +GD  F  LV +++++ K+V I+         AS  L + AD F+    L   
Sbjct: 113 ISRFVLVTGDRDFIPLVNSIRQQGKEVYIIGIG----GAASTHLAQSADEFVFYEQL--- 165

Query: 173 IARDP 177
           + + P
Sbjct: 166 VGKQP 170


>gi|51244756|ref|YP_064640.1| hypothetical protein DP0904 [Desulfotalea psychrophila LSv54]
 gi|50875793|emb|CAG35633.1| hypothetical protein DP0904 [Desulfotalea psychrophila LSv54]
          Length = 258

 Score =  113 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 43/169 (25%), Positives = 80/169 (47%), Gaps = 13/169 (7%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAF-RSRAIVIRAYYYTT----VVGD 55
           M++   K  +++D  N+       G+ + Y  L++      A ++RA  Y         D
Sbjct: 1   MYNDMLKTGIYVDAENIRMCG---GYGMRYDVLVELAGSGNAALLRANSYVAEDRERTKD 57

Query: 56  PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEH 115
             +    L+   D L   GF+V+ K  K F ++ G    K++ D++LA+DA  Q+  L+ 
Sbjct: 58  DAEYRHKLYRYHDVLRQCGFKVIKKFVKHFVDDEGILTTKANADMDLAIDALLQARNLDR 117

Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
           +++ +GD  F  L+ ALQ    +V +++         S +L+  AD F+
Sbjct: 118 IILLTGDSDFIRLILALQNMGCRVEVIAF-----KHVSQELKECADNFL 161


>gi|237799136|ref|ZP_04587597.1| hypothetical protein POR16_09916 [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331021991|gb|EGI02048.1| hypothetical protein POR16_09916 [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 264

 Score =  113 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 27/179 (15%), Positives = 53/179 (29%), Gaps = 29/179 (16%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            ++ +A+ ID  N  A+            L +      +      Y    G     +   
Sbjct: 9   SQKHLAVLIDADNAPAAI--------VDGLFEEIAKYGVASVKRIYGDWTGPQLGGWKK- 59

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSG 121
                           +  ++F    G    K++ D  L +DA +   +   +   + S 
Sbjct: 60  ---------VLLDYSIQPIQQFAYTKG----KNATDSSLIIDAMDLLYTRRFDGFCLVSS 106

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           D  FT L + L+ +   V       +     +       D F+ +  L+ E       D
Sbjct: 107 DSDFTRLASRLREEGLTVYGFGEEKTPRPFVA-----ACDKFIYIELLREEQPVPVSAD 160


>gi|194337430|ref|YP_002019224.1| hypothetical protein Ppha_2419 [Pelodictyon phaeoclathratiforme
           BU-1]
 gi|194309907|gb|ACF44607.1| conserved hypothetical protein [Pelodictyon phaeoclathratiforme
           BU-1]
          Length = 247

 Score =  113 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 53/182 (29%), Gaps = 29/182 (15%)

Query: 3   DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
           +  E++A+ ID  N  A+            LL              Y        + +  
Sbjct: 4   EKTERLAVLIDADNTQATI--------IEGLLAEVAKYGTSSVKRIYGDWTSTALRSWK- 54

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
                        +   +  ++F    G    K++ D  + +DA +   +       I S
Sbjct: 55  ---------EVLLEYSIQPIQQFGYTKG----KNATDSAMIIDAMDLLYTGRFHGFCIVS 101

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
            D  FT L + ++     V                     D F+ +  L+ +I  +    
Sbjct: 102 SDSDFTKLASRIRESGLFVYGFGEKK-----TPSAFVSACDKFIYIEVLRAKINENESIA 156

Query: 181 KK 182
           KK
Sbjct: 157 KK 158


>gi|149913285|ref|ZP_01901818.1| hypothetical protein RAZWK3B_08291 [Roseobacter sp. AzwK-3b]
 gi|149812405|gb|EDM72234.1| hypothetical protein RAZWK3B_08291 [Roseobacter sp. AzwK-3b]
          Length = 186

 Score =  113 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 57/174 (32%), Positives = 95/174 (54%), Gaps = 3/174 (1%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M    +K+A+ IDG  L +    LG  IDYR+L   F   + +    YY  V  D  +  
Sbjct: 6   MLYSTDKLAILIDGQALTSLGFGLGMKIDYRRLKSRFARVSKLTTVKYYAIVDADKVEN- 64

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
            P   LLDWL YNG+Q+  K+A+ F +  G + VK S+  +L+VD    ++ ++H+++  
Sbjct: 65  -PYVKLLDWLDYNGYQIHRKMARVFDDVDGAR-VKGSITADLSVDIIMMAKQVDHILLIG 122

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
           G   +   +   +R   +VT++S++ ++    +D LRR  D F++L  L+NEIA
Sbjct: 123 GHTDYCYAIQQAKRFGARVTLLSSLKAEGFRPADDLRRIVDDFIELEDLRNEIA 176


>gi|302337118|ref|YP_003802324.1| protein of unknown function DUF88 [Spirochaeta smaragdinae DSM
           11293]
 gi|301634303|gb|ADK79730.1| protein of unknown function DUF88 [Spirochaeta smaragdinae DSM
           11293]
          Length = 250

 Score =  113 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 51/182 (28%), Gaps = 29/182 (15%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
              ++K+A+ ID  N   S            LL       I      Y        + + 
Sbjct: 7   EQSQQKLAVLIDADNTQGSI--------VEGLLAEVAKYGIASVKRIYGDWTSPNLRSWK 58

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIF 119
                         +      ++F    G    K++ D  + +DA +   +E  +   I 
Sbjct: 59  ----------EVLLEHSIIPIQQFGYTSG----KNATDSAMIIDAMDLLYTERFDGFCIV 104

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
           S D  FT L A ++ +   V                     D F+    L+ +       
Sbjct: 105 SSDSDFTRLAARIREEGLTVYGFGEKK-----TPRAFVSACDKFIYTEILREDAEEVHST 159

Query: 180 DK 181
            K
Sbjct: 160 KK 161


>gi|86159239|ref|YP_466024.1| hypothetical protein Adeh_2817 [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85775750|gb|ABC82587.1| protein of unknown function DUF88 [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 253

 Score =  113 bits (282), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 59/168 (35%), Gaps = 22/168 (13%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
               ++IALFID  NL   +       D +  L     +  V+    Y          ++
Sbjct: 4   EHSDQRIALFIDFENLVTRTGLSAETFDLQPALDTLLEKGKVVFRRAYA--------DWT 55

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVI 118
                   LH  G ++V             +  K+  D+ L +DA E +   E ++  VI
Sbjct: 56  RFSAATPRLHEKGVELVDVP-------PSTRAGKNGADMRLVIDALELAYLREHIDTFVI 108

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
            SGD  F  L   L+   + V  ++         S    +  D F+ L
Sbjct: 109 ASGDSDFCPLAYKLRENDRTVIGMA----VREATSPLFVKACDEFIYL 152


>gi|222112194|ref|YP_002554458.1| hypothetical protein Dtpsy_3025 [Acidovorax ebreus TPSY]
 gi|221731638|gb|ACM34458.1| protein of unknown function DUF88 [Acidovorax ebreus TPSY]
          Length = 285

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 57/174 (32%), Gaps = 29/174 (16%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M + + +IAL ID  N      A    ID  ++L    +   +     Y          +
Sbjct: 1   MAERQLRIALLIDADN------APADKID--EILTELSTLGEINVRRAYGNWTKSGLGGW 52

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118
                          +   +  ++F  +      K++ D+ + VDA E   SE  +   +
Sbjct: 53  QQRL----------LEFAIRPIQQFDYSK----RKNATDMAMTVDAMELLYSERPDAFGL 98

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
            S D  FT LV  L+ K   V       +               F+ L  L +E
Sbjct: 99  VSSDADFTPLVMHLRAKGSAVYGFGAAQTPKP-----FVNACSRFLYLESLVSE 147


>gi|182414934|ref|YP_001820000.1| hypothetical protein Oter_3120 [Opitutus terrae PB90-1]
 gi|177842148|gb|ACB76400.1| protein of unknown function DUF88 [Opitutus terrae PB90-1]
          Length = 264

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 37/178 (20%), Positives = 67/178 (37%), Gaps = 23/178 (12%)

Query: 8   IALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           +A+F+D  N+   ++   F  +D  K+L+    +  ++    Y          F     L
Sbjct: 10  LAVFLDLENIAHGARDAHFPPLDISKVLERLLLKGNIVVKKAYC--------DFDRFKEL 61

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDG 123
              LH   F+++            R+  K+S D+ + VDA +     + ++   I SGD 
Sbjct: 62  KRDLHEAAFELIEIPHV-------RQSGKNSADIRMVVDALDLCYTNQHVDAFAIISGDS 114

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
            F+ LV+ L+   K V  +       +  SD      D F+    L       P   +
Sbjct: 115 DFSPLVSKLRENAKTVIGL----GVKNSTSDLFIANCDEFIYYDDLVRAQPAKPARSR 168


>gi|332653782|ref|ZP_08419526.1| conserved hypothetical protein [Ruminococcaceae bacterium D16]
 gi|332516868|gb|EGJ46473.1| conserved hypothetical protein [Ruminococcaceae bacterium D16]
          Length = 291

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 24/174 (13%), Positives = 53/174 (30%), Gaps = 31/174 (17%)

Query: 1   MFDPRE--KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58
           M +  +  ++A+ ID  N   ++         + ++              Y         
Sbjct: 30  MPESEKDLRLAVLIDADNASRTA--------MKDVMAEVAVYGTPTIKRIYGDWTSPNMN 81

Query: 59  QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHL 116
            +               +      ++++   G    K+S D  + +DA +   S   +  
Sbjct: 82  SWKS----------ILLETAITPIQQYSYTTG----KNSTDSAMIIDAMDILYSGTCDGF 127

Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
           V+ S D  FT L   L+    KV  +    +             D F+ +  ++
Sbjct: 128 VLVSSDSDFTRLATRLREAGMKVYGMGEKKTPKP-----FIVACDKFVYIEVIR 176


>gi|319956985|ref|YP_004168248.1| hypothetical protein Nitsa_1246 [Nitratifractor salsuginis DSM
           16511]
 gi|319419389|gb|ADV46499.1| hypothetical protein Nitsa_1246 [Nitratifractor salsuginis DSM
           16511]
          Length = 254

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 55/184 (29%), Gaps = 29/184 (15%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M + ++ IA+ ID  N    +         + +LK       VI    Y          +
Sbjct: 1   MQEKKKHIAMLIDCDNASPYA--------IKGILKELSKYGEVIVRQAYGNWNSQQLAPW 52

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVI 118
                          +   K  ++F    G    K++ D+ + +DA +   ++ L+   +
Sbjct: 53  ----------MERLLEHSIKPIQQFDYTKG----KNATDIAMVIDAMDIMYTKDLDGFAL 98

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
            + D  FT L   L      V                       F+    L+ E  +   
Sbjct: 99  VTSDSDFTPLAQRLMSNGLTVYGFGEKK-----TPKAFINSCSQFIYTENLEREEKKSKS 153

Query: 179 EDKK 182
             ++
Sbjct: 154 RTEE 157


>gi|30248674|ref|NP_840744.1| hypothetical protein NE0665 [Nitrosomonas europaea ATCC 19718]
 gi|30180269|emb|CAD84576.1| conserved hypothetical protein [Nitrosomonas europaea ATCC 19718]
          Length = 269

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 53/182 (29%), Gaps = 29/182 (15%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            +P  ++A+ ID  N  A+            LL              Y          + 
Sbjct: 13  EEPTLRLAVLIDADNAQAAV--------IEGLLAEIARFGEATVKRIYGDFTAPASASWK 64

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIF 119
            +            +   K  ++F    G    K++ D  L +DA +   +   +   + 
Sbjct: 65  KVLQ----------KYAIKPVQQFAYTTG----KNATDSTLIIDAMDLLYTRKFDGFCLI 110

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
           + D  FT L   L+ +   V              +  R     F+    L+ + A +   
Sbjct: 111 TSDSDFTGLAMRLREEGLTVLGFGEKK-----TPEAFRNACHKFVFTEVLRPDTATESAA 165

Query: 180 DK 181
            +
Sbjct: 166 QR 167


>gi|291612593|ref|YP_003522750.1| hypothetical protein Slit_0121 [Sideroxydans lithotrophicus ES-1]
 gi|291582705|gb|ADE10363.1| protein of unknown function DUF88 [Sideroxydans lithotrophicus
           ES-1]
          Length = 274

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 61/170 (35%), Gaps = 23/170 (13%)

Query: 9   ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           ALF D  N+    +   +   D +K+L+    +  ++    Y          +       
Sbjct: 11  ALFCDFENVALGVRDAKYAQFDIKKVLERLLLKGSIVVKKAYC--------DWDRYKEFK 62

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLEHLVIFSGDGC 124
             +H   F+++            R+  K+S D+ + VDA +       ++  VI SGD  
Sbjct: 63  ATMHEAAFELIEIPHV-------RQSGKNSADIRMVVDALDLCYTKAHVDTFVIISGDSD 115

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
           F+ LV+ L+   K V  +          SD L    D F+    L     
Sbjct: 116 FSPLVSKLRENNKYVIGI----GVKDSTSDLLSANCDEFIFYDDLVRVQE 161


>gi|71905737|ref|YP_283324.1| hypothetical protein Daro_0095 [Dechloromonas aromatica RCB]
 gi|71845358|gb|AAZ44854.1| Protein of unknown function DUF88 [Dechloromonas aromatica RCB]
          Length = 273

 Score =  112 bits (281), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 48/167 (28%), Gaps = 29/167 (17%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           ++A+ ID  N  A+            LL              Y         Q+  +   
Sbjct: 13  RLAVLIDADNAQATV--------IEGLLAEVARFGEATVKRIYGDFTSPSSSQWKKVLN- 63

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124
                    Q   K  ++F    G    K++ D  + +DA +   +   +   + S D  
Sbjct: 64  ---------QHAIKPVQQFAYTTG----KNATDSTMIIDAMDLLYTRRFDGFCLVSSDSD 110

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
           FT L   ++ +   V              D  R     F+    L+ 
Sbjct: 111 FTGLALRIREEGLTVLGFGEEK-----TPDAFRNACHKFIFTEILRP 152


>gi|160896833|ref|YP_001562415.1| hypothetical protein Daci_1386 [Delftia acidovorans SPH-1]
 gi|160362417|gb|ABX34030.1| protein of unknown function DUF88 [Delftia acidovorans SPH-1]
          Length = 303

 Score =  112 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 56/173 (32%), Gaps = 29/173 (16%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M +P+ +IAL ID  N      A    ID  ++L    +  ++     Y          +
Sbjct: 1   MPEPQPRIALLIDADN------APAEMID--EILTELSTFGVIDIRRAYGNWTKHSLSGW 52

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118
                              +  ++F  +      K++ D+ + VDA E   +E  +   I
Sbjct: 53  QR----------KLLDFALRPMQQFDYSKH----KNATDMAMTVDAMELLYTERPDAFGI 98

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
            S D  FT LV  L+ K   V       +               F+ L  L  
Sbjct: 99  VSSDADFTPLVMHLRSKGAAVYGFGMAQTPQP-----FVNACSRFLYLEALGE 146


>gi|51102893|gb|AAT96043.1| hypothetical protein [Pseudomonas viridiflava]
          Length = 280

 Score =  112 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 25/174 (14%), Positives = 51/174 (29%), Gaps = 29/174 (16%)

Query: 3   DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
             ++ +A+ ID  N  ++            L +      +      Y    G     +  
Sbjct: 18  HAQKHLAVLIDADNAQSAI--------VEGLFEEIAKYGVANVKRIYGDWTGPQLGGWKK 69

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
                        +   +  ++F    G    K++ D  L +DA +   +   +   + S
Sbjct: 70  ----------VLLENSIQPIQQFAYTKG----KNATDSSLIIDAMDLLYTRRFDGFCLVS 115

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
            D  FT L + L+ +   V                     D F+    L+ E+ 
Sbjct: 116 SDSDFTRLASRLREEGLTVYGFGEEK-----TPKSFVSACDKFIYTELLRAEVQ 164


>gi|297623823|ref|YP_003705257.1| hypothetical protein Trad_1595 [Truepera radiovictrix DSM 17093]
 gi|297165003|gb|ADI14714.1| protein of unknown function DUF88 [Truepera radiovictrix DSM 17093]
          Length = 173

 Score =  112 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 39/171 (22%), Positives = 74/171 (43%), Gaps = 14/171 (8%)

Query: 6   EKIALFIDGANLYASSKAL--GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE--QQFS 61
           E++A+FIDG+NLY   +    G  ++ ++ +     +  ++R YYY   + D    ++  
Sbjct: 3   ERVAVFIDGSNLYNGMRDNLTGTRVNLQEFVAQLVCKRHLVRTYYYNAPLTDDYDTERRE 62

Query: 62  PLHPLLDWLHYNGF-QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVI 118
                 + L    +  V         +      V+  +DV +AV++   +     + +++
Sbjct: 63  GQQRFFESLSRIPYVTVRLGRLHRRFDG---TLVEKGVDVAIAVESLSLAYENAYDTVLL 119

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
            SGDG +  LV A++RK K V          + ++  L   AD F  L  L
Sbjct: 120 VSGDGDYVQLVEAIKRKGKHVECAMF----RNQSAGVLIEYADVFHPLDDL 166


>gi|257784783|ref|YP_003180000.1| hypothetical protein Apar_0980 [Atopobium parvulum DSM 20469]
 gi|257473290|gb|ACV51409.1| protein of unknown function DUF88 [Atopobium parvulum DSM 20469]
          Length = 260

 Score =  112 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 71/197 (36%), Gaps = 36/197 (18%)

Query: 1   MFDPREKIALFIDGANLYASS--------KALGFDIDYRKLLKAFRSRAIVIRAYYYTTV 52
           +  P+  IA+FID  NL   +        +  G   + + +++    +  +     Y   
Sbjct: 4   ISTPQSSIAVFIDYENLALGTGKRKRNGHQEPGHLPEMKLIMERLVDKGRITAKRAYC-- 61

Query: 53  VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS-- 110
                  +      +  LH  G +++    + +T        K+S D+ LAVDA E    
Sbjct: 62  ------DWQRFPNAITPLHELGIELIEIPDRAYTG-------KNSADIRLAVDAVEMCLT 108

Query: 111 -EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
            + ++   + SGD  F+ LVA L+   K V  V          S  L    D F+    +
Sbjct: 109 KDHIDTFAVLSGDSDFSPLVAKLKEAGKTVIGV----GMKESTSSLLAEVCDEFIFYEDI 164

Query: 170 K------NEIARDPDED 180
                  +   + P E 
Sbjct: 165 LSSGRIPDFKEKVPAEK 181


>gi|326204799|ref|ZP_08194653.1| protein of unknown function DUF88 [Clostridium papyrosolvens DSM
           2782]
 gi|325985011|gb|EGD45853.1| protein of unknown function DUF88 [Clostridium papyrosolvens DSM
           2782]
          Length = 258

 Score =  112 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 55/176 (31%), Gaps = 29/176 (16%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M     ++A+ ID  N+  S        + + +++             Y          +
Sbjct: 1   MSPDEMRLAVLIDAENVPYS--------NVKGIMEEIARHGTPTIKRIYADWTKPTMSGW 52

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVI 118
                          +      ++++   G    K+S D  + +DA +   S+ +E   I
Sbjct: 53  K----------NVLLENAITPIQQYSYTSG----KNSSDSAMIIDAMDILYSDQVEGFCI 98

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
            S D  FT LV  L+   KKV  +    +             D F  +  +   + 
Sbjct: 99  ISSDSDFTRLVTRLREAGKKVYGIGERKTPSP-----FIAACDKFTYIEIISASLQ 149


>gi|83646130|ref|YP_434565.1| hypothetical protein HCH_03390 [Hahella chejuensis KCTC 2396]
 gi|83634173|gb|ABC30140.1| uncharacterized conserved protein [Hahella chejuensis KCTC 2396]
          Length = 303

 Score =  112 bits (280), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 51/168 (30%), Positives = 80/168 (47%), Gaps = 12/168 (7%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVI-RAYYYTTVVGDPEQQ 59
           M     K  +FID  NL       G  +DY  ++K      +++ RA  Y  V  D EQ+
Sbjct: 1   MKYDGLKAGIFIDNDNLIYGQDREG--LDYSAIIKFVEDLGMLVIRANTYMAVDEDREQK 58

Query: 60  ----FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEH 115
                         +   GF+V  K  K++ +  G    K ++D+ELAVDA  Q++ L++
Sbjct: 59  DAKYRQEQRKHRSDIRNAGFRVFEKPLKKYQQEDGTVYAKGNVDLELAVDALLQTDNLDY 118

Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163
           +++ SGDG F+ +V+ALQ K KKV   +         S +L +  D F
Sbjct: 119 VLLGSGDGDFSRVVSALQHKGKKVEAFAFD-----NISTELSQGVDTF 161


>gi|51102938|gb|AAT96087.1| hypothetical protein [Pseudomonas viridiflava]
          Length = 280

 Score =  112 bits (280), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 25/174 (14%), Positives = 51/174 (29%), Gaps = 29/174 (16%)

Query: 3   DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
             ++ +A+ ID  N  ++            L +      +      Y    G     +  
Sbjct: 18  HAQKHLAVLIDADNAQSAI--------VEGLFEEIAKYGVANVKRIYGDWTGPQLGGWKK 69

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
                        +   +  ++F    G    K++ D  L +DA +   +   +   + S
Sbjct: 70  ----------VLLENSIQPIQQFAYTKG----KNATDSSLIIDAMDLLYTRRFDGFCLVS 115

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
            D  FT L + L+ +   V                     D F+    L+ E+ 
Sbjct: 116 SDSDFTRLASRLREEGLTVYGFGEEK-----TPKSFVSACDKFIYTELLRAEVQ 164


>gi|327482222|gb|AEA85532.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166]
          Length = 277

 Score =  112 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 54/181 (29%), Gaps = 29/181 (16%)

Query: 3   DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
           + ++ +A+ ID  N  A+            L +      +      Y          +  
Sbjct: 9   NKQKHLAVLIDADNAPAAI--------VEGLFEEIAKYGVASVKRIYGDWTKPNLGSWKK 60

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
                            +  ++F    G    K++ D  L +DA +   +   +   + S
Sbjct: 61  ----------VLLDHSIQPIQQFAYTSG----KNATDSSLIIDAMDLLYTRRFDGFCLVS 106

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
            D  FT L A ++ +   V       +     S       D F+    L+ + A+   E 
Sbjct: 107 SDSDFTRLAARIREEGLTVYGFGEQKTPSPFVS-----ACDKFIYTEILRADAAKASVEP 161

Query: 181 K 181
            
Sbjct: 162 P 162


>gi|154496234|ref|ZP_02034930.1| hypothetical protein BACCAP_00519 [Bacteroides capillosus ATCC
           29799]
 gi|150274317|gb|EDN01394.1| hypothetical protein BACCAP_00519 [Bacteroides capillosus ATCC
           29799]
          Length = 288

 Score =  112 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 55/181 (30%), Gaps = 29/181 (16%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M +   ++A+ ID  N   S+         R ++              Y          +
Sbjct: 1   MDNQDLRLAVLIDADNAPRSA--------LRDIMAEAAVYGTPTVKRIYGDWTTPNMASW 52

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118
            P             +      ++++   G    K++ D  + +DA +   S   +  V+
Sbjct: 53  KP----------LLLEHAITPIQQYSYTTG----KNATDSAMIIDAMDLLYSGRCDGFVL 98

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
            S D  FT L   L+    KV  +    +             D F+ +  ++    +   
Sbjct: 99  VSSDSDFTRLATRLREAGMKVYGMGEKKTPLP-----FIVACDKFIYIEVIRAAGEKARQ 153

Query: 179 E 179
           E
Sbjct: 154 E 154


>gi|302336205|ref|YP_003801412.1| protein of unknown function DUF88 [Olsenella uli DSM 7084]
 gi|301320045|gb|ADK68532.1| protein of unknown function DUF88 [Olsenella uli DSM 7084]
          Length = 258

 Score =  112 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 40/181 (22%), Positives = 67/181 (37%), Gaps = 31/181 (17%)

Query: 1   MFDPREK-IALFIDGANLYASS--------KALGFDIDYRKLLKAFRSRAIVIRAYYYTT 51
           M +  +  +A+ ID  NL   +        +  G   D +++L+    +  +     Y  
Sbjct: 1   MSEANQSSLAVLIDYENLALGTGRRKRNGHQEPGPRPDAKRILERLVDKGRITAKRAYC- 59

Query: 52  VVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS- 110
                   +      +  LH  G +++    + FT        K+S D+ LAVDA E   
Sbjct: 60  -------DWQRFDDAITPLHELGIELIEIPDRAFTG-------KNSADIRLAVDAMEMCL 105

Query: 111 --EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
             + ++   I SGD  F+ LVA L+   K V  V          S  L    D F+    
Sbjct: 106 TKDHIDTFAILSGDSDFSPLVAKLKEFGKTVIGV----GMKESTSTLLAEVCDEFLFYED 161

Query: 169 L 169
           +
Sbjct: 162 I 162


>gi|296134764|ref|YP_003642006.1| protein of unknown function DUF88 [Thiomonas intermedia K12]
 gi|295794886|gb|ADG29676.1| protein of unknown function DUF88 [Thiomonas intermedia K12]
          Length = 259

 Score =  112 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 33/172 (19%), Positives = 54/172 (31%), Gaps = 30/172 (17%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M     +IAL ID  N      +    ID  ++L       I+     Y           
Sbjct: 1   MSH-EPRIALLIDADN------SPADMID--EVLDELAKEGIINIRRAYGNWKSPH---- 47

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118
                 L+           +  ++F    G    K++ D  + +DA +   ++ L+   I
Sbjct: 48  ------LNAWAALLHDFAIQPIQQFDYTKG----KNATDAAMIIDAMDLLYTKQLDGFGI 97

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
            S D  FT LV  L+    KV       +               F+ L  L+
Sbjct: 98  VSSDSDFTPLVMRLRANGLKVYGFGEQKTPKP-----FVNACSKFLYLENLR 144


>gi|189347523|ref|YP_001944052.1| hypothetical protein Clim_2044 [Chlorobium limicola DSM 245]
 gi|189341670|gb|ACD91073.1| conserved hypothetical protein [Chlorobium limicola DSM 245]
          Length = 249

 Score =  112 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 53/173 (30%), Gaps = 29/173 (16%)

Query: 3   DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
           D   ++A+ ID  N   +            +L              Y        + +  
Sbjct: 4   DKSGRLAVLIDADNAQPAI--------IEGILSEIAQYGTASVRRIYGDWTSTALKSWK- 54

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
                        +++ + + +  +  G  + K++ D  + +DA +   +   +   I S
Sbjct: 55  -------------ELLLQHSIQPIQQFGYTKGKNATDSAMIIDAMDLLYTGKFDGFCIVS 101

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
            D  FT L + L+     V       +     S       D F+    L+ +I
Sbjct: 102 SDSDFTKLASRLRESGLTVYGFGEKKTPSPFVS-----ACDKFIYTELLRAKI 149


>gi|254432040|ref|ZP_05045743.1| DUF88 [Cyanobium sp. PCC 7001]
 gi|197626493|gb|EDY39052.1| DUF88 [Cyanobium sp. PCC 7001]
          Length = 219

 Score =  112 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 47/207 (22%), Positives = 89/207 (42%), Gaps = 39/207 (18%)

Query: 2   FDPREK-IALFIDGANLYASSKALGFDIDYRKLLKAFRSRA--IVIRAYYYTTVVGDPEQ 58
           F PR + + + +DG +++ + + LG+  D R+LL+   S+    +  A++Y  +      
Sbjct: 13  FQPRPRQLVVAVDGHSMFYAQQKLGWFFDPRRLLRHASSQPGLELAGAFWYAGLKDP--- 69

Query: 59  QFSPLHPLLDWLHYNGFQVVAKVAKEFT-----------ENCGRK--------------- 92
             S   P  D L   GF V  +  +E             +   R                
Sbjct: 70  --SDQRPFRDALTSLGFTVRTRPLRELAPPASNGSTQAADGEHRHPEPPRPTDQRPADQR 127

Query: 93  -RVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151
             V++++DVE+AVD    +   + + + SG      LV  L+ +  ++T+++T      M
Sbjct: 128 HFVRANLDVEVAVDLMMVAPRTDEVWLLSGSRDLDRLVEVLRAQGVRITLMTT----EGM 183

Query: 152 ASDQLRRQADYFMDLAYLKNEIARDPD 178
            + +LR  AD F+DLA L+  + +   
Sbjct: 184 VARELRNAADGFVDLASLRPVLEKAES 210


>gi|296272728|ref|YP_003655359.1| hypothetical protein Arnit_1193 [Arcobacter nitrofigilis DSM 7299]
 gi|296096902|gb|ADG92852.1| protein of unknown function DUF88 [Arcobacter nitrofigilis DSM
           7299]
          Length = 236

 Score =  112 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 54/181 (29%), Gaps = 29/181 (16%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
             +K+A+ ID  N  AS           +LL+      I      Y        + +   
Sbjct: 5   STDKLAVLIDADNAQASV--------ISELLEEIAKFGITNIKRAYGDWTTSQLKGWKEH 56

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSG 121
                           +  ++F+   G    K++ D  L +DA +      L+   I S 
Sbjct: 57  LH----------THAIQPIQQFSYTNG----KNATDSSLIIDAMDILHENRLDGFCIISS 102

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
           D  FT L   ++    KV              +      D F+    L+         ++
Sbjct: 103 DSDFTRLATRIRESGLKVYGFGEQK-----TPEAFISACDKFVYTENLREIKEVPQTNNE 157

Query: 182 K 182
           +
Sbjct: 158 Q 158


>gi|255931419|ref|XP_002557266.1| Pc12g03870 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211581885|emb|CAP80014.1| Pc12g03870 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 259

 Score =  112 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 51/181 (28%), Gaps = 29/181 (16%)

Query: 3   DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
           D   K  + ID  N   S            LL              Y        + +S 
Sbjct: 4   DKSPKFVVLIDADNAQFSI--------VTDLLAEVAKHGTAHVKRAYGDWTNTGLKGWS- 54

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFS 120
                        +   +  ++F    G    K++ D  + VDA +   S   +   + S
Sbjct: 55  ---------DVLLRNSIQPIQQFAYTHG----KNATDSAMIVDAMDLLHSGNFDGFCLVS 101

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
            D  FT L   ++    KV       +     +       D F+    LK      P+ +
Sbjct: 102 SDSDFTRLATRIRESGLKVYGFGERKTPKPFVA-----ACDEFIYTEDLKYLPEFAPNSN 156

Query: 181 K 181
           +
Sbjct: 157 E 157


>gi|256419852|ref|YP_003120505.1| hypothetical protein Cpin_0806 [Chitinophaga pinensis DSM 2588]
 gi|256034760|gb|ACU58304.1| protein of unknown function DUF88 [Chitinophaga pinensis DSM 2588]
          Length = 246

 Score =  112 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 59/183 (32%), Gaps = 29/183 (15%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M +   ++A+ ID  N+  +          +++++      I      Y          +
Sbjct: 1   MENKDLRLAVLIDADNIPYN--------KVKEMMEEVAKYGIPTFKRIYGDWTKPTLAGW 52

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVI 118
             +                   ++++   G    K++ D  + +DA +   +  ++   +
Sbjct: 53  KTVLLDNA----------ITPIQQYSYTSG----KNATDSAMIIDAMDILYTGRVDGFCL 98

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
            + D  FT L   L+    +V  +              R   D F+ L  L +E+     
Sbjct: 99  ITSDSDFTRLATRLREAGMRVFGLGEKK-----TPSAFRAACDKFIYLEILVSEVKDASV 153

Query: 179 EDK 181
           + K
Sbjct: 154 KPK 156


>gi|325982853|ref|YP_004295255.1| hypothetical protein NAL212_2271 [Nitrosomonas sp. AL212]
 gi|325532372|gb|ADZ27093.1| Domain of unknown function DUF88 [Nitrosomonas sp. AL212]
          Length = 292

 Score =  112 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 49/171 (28%), Gaps = 29/171 (16%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            +P  ++A+ ID  N  A+            LL              Y          + 
Sbjct: 36  EEPTLRLAVLIDADNAQAAV--------IESLLAEIARFGEATVKRIYGDFTAHASASWK 87

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIF 119
            +            +   K  ++F    G    K++ D  L +DA +   +   +   + 
Sbjct: 88  KVLQ----------KYAIKPVQQFAYTTG----KNATDSALIIDAMDLLYTRKFDGFCLI 133

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
           + D  FT L   L+ +   V              D  R     F+    L+
Sbjct: 134 TSDSDFTGLAMRLREEGLTVLGFGEKK-----TPDAFRNACHKFVFTEILR 179


>gi|115377562|ref|ZP_01464761.1| hypothetical protein STIAU_6634 [Stigmatella aurantiaca DW4/3-1]
 gi|115365449|gb|EAU64485.1| hypothetical protein STIAU_6634 [Stigmatella aurantiaca DW4/3-1]
          Length = 359

 Score =  112 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 36/166 (21%), Positives = 59/166 (35%), Gaps = 22/166 (13%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
              +IALF+D  NL  ++       D +  L     +  V+    Y          +S  
Sbjct: 51  NESRIALFLDFENLVTNTGISTAGFDLQPSLDRLLEKGKVVFRRAYC--------DWSRF 102

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFS 120
                 LH +G ++V             +  K+  D+ L +DA E     E ++  VI S
Sbjct: 103 SDAKGRLHEHGVELVDVP-------PSTRAGKNGADMRLVIDALELCYAREHIDTFVIAS 155

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
           GD  F  L   L+   + V  ++         S    +  D F+ L
Sbjct: 156 GDSDFCPLAYKLRENGRTVIGLA----VKESTSPLFVKACDEFLYL 197


>gi|300866267|ref|ZP_07110978.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
 gi|300335738|emb|CBN56138.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
          Length = 157

 Score =  112 bits (279), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 44/163 (26%), Positives = 83/163 (50%), Gaps = 13/163 (7%)

Query: 17  LYASSKALGFDIDYRKLLKAFRSRAI---VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYN 73
           ++ + +  G+  D R++L+ F++      +I A++YT +               D L   
Sbjct: 1   MFYAQQKNGWFFDPRRVLEYFKNAQQNVMLINAFWYTGLKDP-----QDQRGFRDALISL 55

Query: 74  GFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAAL 132
           G+ V  K+ KE+ ++  GR   K+++D+E+ VD F   +  + +V+FSGDG F   +  L
Sbjct: 56  GYTVRTKILKEYYDDASGRYSQKANLDIEIVVDMFNTVDQYDQVVLFSGDGDFERAIELL 115

Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
           + K   +T+VST      M + +LR   D ++DL  ++  I +
Sbjct: 116 RSKNTHITVVST----EGMIARELRNATDRYIDLNEIREHIEK 154


>gi|21673303|ref|NP_661368.1| hypothetical protein CT0467 [Chlorobium tepidum TLS]
 gi|21646394|gb|AAM71710.1| conserved hypothetical protein [Chlorobium tepidum TLS]
          Length = 426

 Score =  111 bits (278), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 56/184 (30%), Gaps = 29/184 (15%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M   RE IA+ ID  N      +    ID+  +L       +V     Y        + +
Sbjct: 1   MEHSRETIAMLIDADN------SPSDKIDF--ILAEMAKYGVVNIRRAYGNWKSHSLKGW 52

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118
                              +  ++F    G    K++ D+ + +D  +   S+ L+   I
Sbjct: 53  ----------EDKLHDYAIRPIQQFDYTKG----KNATDMAMTIDGMDLLFSKKLDAFCI 98

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
            S D  FT LV  +  +   V       +               F+ L     E  +   
Sbjct: 99  VSSDSDFTPLVMRILSEGLNVYGFGQKSTPLP-----FVNACSTFLYLDSFAGEKEQTKS 153

Query: 179 EDKK 182
           +  +
Sbjct: 154 DSCR 157


>gi|220928157|ref|YP_002505066.1| hypothetical protein Ccel_0707 [Clostridium cellulolyticum H10]
 gi|219998485|gb|ACL75086.1| protein of unknown function DUF88 [Clostridium cellulolyticum H10]
          Length = 258

 Score =  111 bits (278), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 55/176 (31%), Gaps = 29/176 (16%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M     ++A+ ID  N+  S        + + +++             Y          +
Sbjct: 1   MSPDEMRLAVLIDAENVPYS--------NVKGIMEEIAKHGTPTLKRIYADWTKPTMSGW 52

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVI 118
                          +      ++++   G    K+S D  + +DA +   S+ +E   I
Sbjct: 53  K----------NVLLENAITPIQQYSYTSG----KNSSDSAMIIDAMDILYSDQVEGFCI 98

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
            S D  FT LV  L+   KKV  +    +             D F  +  +   + 
Sbjct: 99  VSSDSDFTRLVTRLREAGKKVYGIGERKTPSP-----FIAACDKFTYIEIISASLQ 149


>gi|309781025|ref|ZP_07675764.1| conserved hypothetical protein [Ralstonia sp. 5_7_47FAA]
 gi|308920328|gb|EFP65986.1| conserved hypothetical protein [Ralstonia sp. 5_7_47FAA]
          Length = 247

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 51/173 (29%), Gaps = 29/173 (16%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M     ++A+ ID  N  A+          ++LL+      +      Y          +
Sbjct: 9   MAQDALRLAVLIDADNASAAV--------IKELLEEVAKYGVATVKRSYGDWTTQNLVGW 60

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118
                          +   +  ++F    G    K+S D    +DA +      ++   +
Sbjct: 61  KDHLH----------RHAIQPMQQFAYTKG----KNSTDSACIIDAMDLLYGGNVDGFCL 106

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
            S D  FT L   L+   K V              D      D F+ +  LK 
Sbjct: 107 VSSDSDFTRLATRLREAGKVVYGFGERK-----TPDAFIAACDKFVFVEVLKQ 154


>gi|332703643|ref|ZP_08423731.1| protein of unknown function DUF88 [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332553792|gb|EGJ50836.1| protein of unknown function DUF88 [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 251

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 53/176 (30%), Gaps = 29/176 (16%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M    +++A+ ID  N  AS+           LLK             Y        + +
Sbjct: 1   MVANADRLAVLIDADNATASA--------IDGLLKEVSKYGTPTVKRAYGDWTTSQLKSW 52

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118
                          +   +  ++F+   G    K+S D  L +DA +   S       I
Sbjct: 53  K----------DVLHKYAIQPEQQFSYTKG----KNSTDSALIIDAMDLLYSRNFTGFCI 98

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
            S D  +T L   +++    V       +     +       D F+ L   K  + 
Sbjct: 99  VSSDSDYTRLATRIRQDGVFVYGFGERKTPEPFVA-----ACDKFVFLEIFKESVE 149


>gi|310821658|ref|YP_003954016.1| hypothetical protein STAUR_4409 [Stigmatella aurantiaca DW4/3-1]
 gi|309394730|gb|ADO72189.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
          Length = 331

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 36/166 (21%), Positives = 59/166 (35%), Gaps = 22/166 (13%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
              +IALF+D  NL  ++       D +  L     +  V+    Y          +S  
Sbjct: 23  NESRIALFLDFENLVTNTGISTAGFDLQPSLDRLLEKGKVVFRRAYC--------DWSRF 74

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFS 120
                 LH +G ++V             +  K+  D+ L +DA E     E ++  VI S
Sbjct: 75  SDAKGRLHEHGVELVDVP-------PSTRAGKNGADMRLVIDALELCYAREHIDTFVIAS 127

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
           GD  F  L   L+   + V  ++         S    +  D F+ L
Sbjct: 128 GDSDFCPLAYKLRENGRTVIGLA----VKESTSPLFVKACDEFLYL 169


>gi|87302148|ref|ZP_01084973.1| hypothetical protein WH5701_08104 [Synechococcus sp. WH 5701]
 gi|87283073|gb|EAQ75029.1| hypothetical protein WH5701_08104 [Synechococcus sp. WH 5701]
          Length = 260

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 42/177 (23%), Positives = 84/177 (47%), Gaps = 13/177 (7%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFR--SRAIVIRAYYYTTVVGDPEQQFSPLH 64
           ++ + +DG  ++ + + LG+  D R+LL+         +  AY+YT +    +Q      
Sbjct: 52  RVVI-VDGHGMFYAQQKLGWFFDPRRLLELATADPGVELDGAYWYTGLKDPADQ-----R 105

Query: 65  PLLDWLHYNGFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
           P  D L   G+ V +K  +EF  +   R+  ++++DVE+ +D    +  L+ + + SG  
Sbjct: 106 PFRDALTSLGYTVRSKPLREFGADPEHRQFARANLDVEICLDLMMVAHRLDEVWLLSGSR 165

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
               LV  L+ K  ++T++    +   M   +LR   D F+DLA  + ++ +     
Sbjct: 166 DLERLVETLRAKGIRITLL----NADGMVPRELRNAVDVFLDLAGRRKQLEKAEAAQ 218


>gi|146300165|ref|YP_001194756.1| hypothetical protein Fjoh_2410 [Flavobacterium johnsoniae UW101]
 gi|146154583|gb|ABQ05437.1| hypothetical protein Fjoh_2410 [Flavobacterium johnsoniae UW101]
          Length = 259

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 53/178 (29%), Gaps = 29/178 (16%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
              K+A+ ID  N+  S        + + +++             Y          +   
Sbjct: 7   KDLKLAVLIDADNVPYS--------NVKGMMEEIAKFGTPTTKRIYADWTKPNANGWKA- 57

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSG 121
                       +      ++++   G    K+S D  L +DA +   S  L+   I S 
Sbjct: 58  ---------VLLEHAITPIQQYSYTVG----KNSSDSALIIDAMDLLYSGKLDGFCIVSS 104

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
           D  FT L   L+    KV  +                  D F+ +  L   I +   +
Sbjct: 105 DSDFTRLAVRLRESGMKVIGIGEKK-----TPSSFIVACDRFIYIEVLDGAIQKKKPK 157


>gi|295133849|ref|YP_003584525.1| hypothetical protein ZPR_2004 [Zunongwangia profunda SM-A87]
 gi|294981864|gb|ADF52329.1| conserved hypothetical protein [Zunongwangia profunda SM-A87]
          Length = 246

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 60/177 (33%), Gaps = 32/177 (18%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           +A+ IDG N+ ++          +++++             Y         ++       
Sbjct: 5   LAVLIDGDNIPSAY--------VKEMMEEIAKHGNPTIKRIYGDWTNPHLSKWKS----- 51

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDGCF 125
                   +      +++    G  + K++ D  + +DA +   S  ++   + S D  F
Sbjct: 52  -----VLLENAISPIQQY----GYTQGKNATDSAMIIDAMDILYSNKVDGFCLVSSDSDF 102

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182
           T L   L+   K+V  +           D      D F+ L  LK    +D +E  +
Sbjct: 103 TRLATRLREAGKRVIGIGEKK-----TPDPFIVACDRFIYLEILK---TKDKEEQPE 151


>gi|319953532|ref|YP_004164799.1| hypothetical protein Celal_2004 [Cellulophaga algicola DSM 14237]
 gi|319422192|gb|ADV49301.1| Domain of unknown function DUF88 [Cellulophaga algicola DSM 14237]
          Length = 252

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 61/183 (33%), Gaps = 29/183 (15%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            D    +A+ IDG N+ ++          +++++             Y         ++ 
Sbjct: 1   MDSNINLAVLIDGDNIPSAQ--------VKEMMEEIAKYGNPTIKRIYGDWTKPNLTKWK 52

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIF 119
                         +      +++    G    K++ D  + +DA +   SE +    + 
Sbjct: 53  ----------NLLLENAITPIQQYGYTTG----KNATDSAMIIDAMDILYSEKVNGFCLV 98

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
           S D  FT L   L+    KV  +    +             D F+ +  LK++I    ++
Sbjct: 99  SSDSDFTRLATRLREAGMKVIGIGEKKTPNP-----FIVACDKFIYIEILKSKIESPEND 153

Query: 180 DKK 182
            +K
Sbjct: 154 SEK 156


>gi|119493449|ref|ZP_01624118.1| hypothetical protein L8106_08531 [Lyngbya sp. PCC 8106]
 gi|119452693|gb|EAW33872.1| hypothetical protein L8106_08531 [Lyngbya sp. PCC 8106]
          Length = 157

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 44/163 (26%), Positives = 84/163 (51%), Gaps = 13/163 (7%)

Query: 17  LYASSKALGFDIDYRKLLKAFRSRA---IVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYN 73
           ++ + +  G+  D R++L  F+      I++ A++YT +               D L   
Sbjct: 1   MFYAQQKNGWFFDPRRVLTYFKHEQSDVILVNAFWYTGLKDP-----QDQRGFRDALISL 55

Query: 74  GFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAAL 132
           G+ V  K+ KE+  ++ GR   K+++D+E+ VD F   +  + +V+FSGDG F   +  L
Sbjct: 56  GYTVRTKILKEYYDDSSGRYSQKANLDIEIVVDMFNTVDQYDRVVLFSGDGDFERAIELL 115

Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
           + K   +T+VST      M + +LR   D ++DL  ++++I +
Sbjct: 116 RSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDQIEK 154


>gi|113474390|ref|YP_720451.1| hypothetical protein Tery_0526 [Trichodesmium erythraeum IMS101]
 gi|110165438|gb|ABG49978.1| protein of unknown function DUF88 [Trichodesmium erythraeum IMS101]
          Length = 295

 Score =  111 bits (278), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 47/170 (27%), Positives = 79/170 (46%), Gaps = 13/170 (7%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
           + +  L ID ANL  ++K+L   +DY +L +        + A  Y           S   
Sbjct: 137 QRRTLLAIDSANLDGAAKSLNMKVDYERLKRYVNVHFGSLEARIYVGK----YDNSSRQK 192

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
              ++L  NG+ V  K    +        VK+++DV+LA+D  E     +++V+ SGDG 
Sbjct: 193 LWFNYLEKNGYVVKTKPVTVYGNT-----VKANVDVDLALDIREHGVNFKNVVLCSGDGD 247

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
           +  LV  LQ    KV +++     P   +  L+RQAD ++ L  +  EI+
Sbjct: 248 YLPLVEQLQGLGIKVIVLA----SPGHTNHFLQRQADEYISLIDIMGEIS 293


>gi|121596033|ref|YP_987929.1| hypothetical protein Ajs_3744 [Acidovorax sp. JS42]
 gi|120608113|gb|ABM43853.1| protein of unknown function DUF88 [Acidovorax sp. JS42]
          Length = 287

 Score =  111 bits (277), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 35/174 (20%), Positives = 57/174 (32%), Gaps = 29/174 (16%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M + + +IAL ID  N      A    ID  ++L    +   +     Y          +
Sbjct: 1   MAERQLRIALLIDADN------APADKID--EILTELSTLGEINVRRAYGNWTKSGLGGW 52

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118
                          +   +  ++F  +      K++ D+ + VDA E   SE  +   I
Sbjct: 53  QQRL----------LEFAIRPIQQFDYSK----RKNATDMAMTVDAMELLYSERPDAFGI 98

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
            S D  FT LV  L+ K   V       +               F+ L  L +E
Sbjct: 99  VSSDADFTPLVMHLRAKGSAVYGFGAAQTPKP-----FVNACSRFLYLESLVSE 147


>gi|328949646|ref|YP_004366981.1| Domain of unknown function DUF88 [Marinithermus hydrothermalis DSM
           14884]
 gi|328449970|gb|AEB10871.1| Domain of unknown function DUF88 [Marinithermus hydrothermalis DSM
           14884]
          Length = 174

 Score =  111 bits (277), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 41/169 (24%), Positives = 79/169 (46%), Gaps = 12/169 (7%)

Query: 5   REKIALFIDGANLYA---SSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            ++IA+F+DG+NLY    S+    + +D+ + +++  +   ++RAYYY   +   +    
Sbjct: 1   MDRIAIFMDGSNLYKGLVSTLGPDYRLDFVRFIESLVAGRKLLRAYYYNAPLPSEDPASK 60

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIF 119
                L++L    +  V     E     G   V+  +D+++AVD      +   +  V+ 
Sbjct: 61  AHQSFLNYLKRVPYVAVRLGRLERR---GDTFVEKGVDIQIAVDMLRLAYARAYDVAVLV 117

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
           SGDG F  +V  +Q    +V       +  +++S +L +QAD F  L  
Sbjct: 118 SGDGDFAEVVRVVQDMGMQV----ENTTFQALSSYRLAQQADRFYPLDD 162


>gi|332884085|gb|EGK04365.1| hypothetical protein HMPREF9456_01393 [Dysgonomonas mossii DSM
           22836]
          Length = 252

 Score =  111 bits (277), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 24/184 (13%), Positives = 57/184 (30%), Gaps = 30/184 (16%)

Query: 1   MFDPRE-KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
           M + R+  +A+ ID  N+  S        + + +L       +      Y          
Sbjct: 1   MIEKRDLNLAVLIDADNVPYS--------NIKGMLDEIAKIGVPTIKRIYGDWTKPSVSG 52

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLV 117
           +               +      ++++   G    K++ D  + +DA +      ++   
Sbjct: 53  WKQPL----------LEHAITPIQQYSYTTG----KNATDSAMIIDAMDILHGGRVDGFC 98

Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
           + S D  FT L   L+    +V  +    +             D F+ +  +++    + 
Sbjct: 99  LVSSDSDFTRLAVRLRESGMQVIGIGEKKTPSP-----FIVACDKFIYIEIIRDSDDNNE 153

Query: 178 DEDK 181
            E  
Sbjct: 154 TESP 157


>gi|260432079|ref|ZP_05786050.1| protein containing DUF88 [Silicibacter lacuscaerulensis ITI-1157]
 gi|260415907|gb|EEX09166.1| protein containing DUF88 [Silicibacter lacuscaerulensis ITI-1157]
          Length = 238

 Score =  111 bits (277), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 63/184 (34%), Gaps = 29/184 (15%)

Query: 1   MFDPR-EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
           M +   E++A+ ID  N+   +K +       ++ +   +         Y    G   Q 
Sbjct: 1   MTNTTTERLAVLIDAENVP--AKHV------AEIFEEVATLGEASLRRIYGDFSGGTPQG 52

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLV 117
           +S              +      ++F    G    K++ D+ L +DA +   S   +  V
Sbjct: 53  WSAEKL---------AEYAIVPHQQFANTTG----KNAGDIALVIDAMDILHSGRFDGFV 99

Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
           + S D  FT L + ++ +  +V  +                  + F+ +  +K E +   
Sbjct: 100 LVSSDSDFTRLASRIREQGLRVYGIGERK-----TPKAFVAACNRFILIENIKKESSNGE 154

Query: 178 DEDK 181
              K
Sbjct: 155 KTKK 158


>gi|255280264|ref|ZP_05344819.1| conserved hypothetical protein [Bryantella formatexigens DSM 14469]
 gi|255269355|gb|EET62560.1| conserved hypothetical protein [Bryantella formatexigens DSM 14469]
          Length = 349

 Score =  111 bits (277), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 60/182 (32%), Gaps = 29/182 (15%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M +  E+ AL ID  N+  S+K        + +L        V     Y          +
Sbjct: 1   MKENEERYALLIDADNV--SAKY------IKPILDELSKYGNVTYKRIYGDWTSTQHASW 52

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVI 118
                          Q      ++++   G    K++ D  + +DA +   +  ++   +
Sbjct: 53  K----------EVLLQNSISPIQQYSYTQG----KNATDSAMIIDAMDILYTGNVDGFCL 98

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
            S D  FT L + L+   + V  +    +         R+  + F  L  L  +   + +
Sbjct: 99  VSSDSDFTRLASRLRESGQNVIGMGEAKTPIP-----FRQACNIFTTLELLLEDSTSEKE 153

Query: 179 ED 180
           E 
Sbjct: 154 EK 155


>gi|153004596|ref|YP_001378921.1| hypothetical protein Anae109_1734 [Anaeromyxobacter sp. Fw109-5]
 gi|152028169|gb|ABS25937.1| protein of unknown function DUF88 [Anaeromyxobacter sp. Fw109-5]
          Length = 249

 Score =  110 bits (276), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 38/166 (22%), Positives = 60/166 (36%), Gaps = 22/166 (13%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
             ++IALFID  NL   +       D +  L A   +  V+    Y          ++  
Sbjct: 7   HDQRIALFIDFENLVTRTGLSAETFDLQPALDALLEKGKVVFRRAYA--------DWTRF 58

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFS 120
                 LH  G ++V             +  K+  DV L +DA E +   E ++  VI S
Sbjct: 59  AEATQRLHDKGVELVDVP-------PSTRAGKNGADVRLVIDALELAYLREHIDTFVIAS 111

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
           GD  F  L   L+   + V  ++         S    +  D F+ L
Sbjct: 112 GDSDFCPLAYKLRENDRNVIGMA----VREATSPLFVKACDQFIYL 153


>gi|330824578|ref|YP_004387881.1| hypothetical protein Alide2_1990 [Alicycliphilus denitrificans
           K601]
 gi|329309950|gb|AEB84365.1| Domain of unknown function DUF88 [Alicycliphilus denitrificans
           K601]
          Length = 239

 Score =  110 bits (276), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 51/173 (29%), Gaps = 29/173 (16%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M     ++A+ ID  N  A+          ++LL+      +      Y          +
Sbjct: 1   MAQDALRLAVLIDADNASAAV--------IKELLEEVAKYGVATVKRSYGDWTTQNLVGW 52

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118
                          +   +  ++F    G    K+S D    +DA +      ++   +
Sbjct: 53  KDHLH----------RHAIQPMQQFAYTKG----KNSTDSACIIDAMDLLYGGNVDGFCL 98

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
            S D  FT L   L+   K V              D      D F+ +  LK 
Sbjct: 99  VSSDSDFTRLATRLREAGKVVYGFGERK-----TPDAFIAACDKFVFVEVLKQ 146


>gi|328951205|ref|YP_004368540.1| Domain of unknown function DUF88 [Marinithermus hydrothermalis DSM
           14884]
 gi|328451529|gb|AEB12430.1| Domain of unknown function DUF88 [Marinithermus hydrothermalis DSM
           14884]
          Length = 186

 Score =  110 bits (276), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 44/177 (24%), Positives = 83/177 (46%), Gaps = 16/177 (9%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
            E+I LFIDG+ +Y+++K +G+++D+R++L+ FR    +  A+YY  +    ++      
Sbjct: 1   MERIGLFIDGSYIYSAAKRMGWNVDHRRVLEHFRGDRALYNAFYYAPITDPNDE---RQL 57

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
             LD L + G+ V +   +  + N G         V L  D    +   E  +I SG   
Sbjct: 58  KFLDALVFMGYTVRSHEVRGESPNLG---------VYLVTDLLLTAPRWEVALISSGARE 108

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
               V A++   K+V ++      P +   +LR  +D F+D+   +  + R P   +
Sbjct: 109 IAPAVEAVRAMGKEVRLL----GLPELTDLELRSSSDRFIDIREYREVLERQPGGRR 161


>gi|312879353|ref|ZP_07739153.1| protein of unknown function DUF88 [Aminomonas paucivorans DSM
           12260]
 gi|310782644|gb|EFQ23042.1| protein of unknown function DUF88 [Aminomonas paucivorans DSM
           12260]
          Length = 289

 Score =  110 bits (276), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 26/177 (14%), Positives = 49/177 (27%), Gaps = 29/177 (16%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           +A+ ID  N   +            LL       +      Y          +       
Sbjct: 53  LAVLIDADNANPAI--------IEGLLGEVAKYGVASVKRIYGDWTTPQLGSWKT----- 99

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCF 125
                   +      ++F    G    K++ D  + +DA +   +   +   + S D  F
Sbjct: 100 -----VLLEYSIHPVQQFRYTVG----KNATDSAMIIDAMDLLYTGRFDGFCLVSSDSDF 150

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182
           T L + ++ + K+V                     D F+    L  E  R     +K
Sbjct: 151 TRLASRIREEGKRVVGFGEKK-----TPRAFVSACDKFIYTELLVAETGRGGTAVRK 202


>gi|260914714|ref|ZP_05921179.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
 gi|260631218|gb|EEX49404.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
          Length = 261

 Score =  110 bits (275), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 56/174 (32%), Gaps = 30/174 (17%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           + +  +++A+ ID  N  AS++      D + +L+             Y   V    Q  
Sbjct: 11  IEESTKRLAVLIDADN--ASAR------DIKAILEEVTKYGEATVKRIYGNFVSTNGQWK 62

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118
             ++               K  ++F    G    K++ D  + +DA +   +   +   I
Sbjct: 63  ETINQY-----------AIKPMQQFAFTTG----KNATDGFMIIDAMDLLYTNRFDGFCI 107

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
            S D  FT L   L+     V                 R     F+ +  L ++
Sbjct: 108 VSSDSDFTALAIRLKEHGATVYGFG-----KKQTPLAFRNACSRFIYVENLHDD 156


>gi|119357877|ref|YP_912521.1| hypothetical protein Cpha266_2085 [Chlorobium phaeobacteroides DSM
           266]
 gi|119355226|gb|ABL66097.1| conserved hypothetical protein [Chlorobium phaeobacteroides DSM
           266]
          Length = 249

 Score =  110 bits (275), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 25/177 (14%), Positives = 51/177 (28%), Gaps = 29/177 (16%)

Query: 3   DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
           +  +++A+ ID  N   S            LL              Y        + +  
Sbjct: 4   EKSDRLAVLIDADNTQPSI--------IEGLLAEIAKYGTANVKRIYGDWTSTSLRGWK- 54

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
                        +   +  ++F    G    K++ D  + +DA +   +       I S
Sbjct: 55  ---------EILLEHSIQPIQQFGYTKG----KNATDSAMIIDAMDLLYTGKFHGFCIVS 101

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
            D  FT L + ++     V       +     S       D F+    L+ + + + 
Sbjct: 102 SDSDFTKLASRIRESGLTVYGFGEKKTPSPFVS-----ACDKFIYTEVLRAKTSENE 153


>gi|662866|emb|CAA87004.1| orf1 [Nostoc sp. PCC 7120]
          Length = 157

 Score =  110 bits (275), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 43/165 (26%), Positives = 82/165 (49%), Gaps = 13/165 (7%)

Query: 17  LYASSKALGFDIDYRKLLKAFRSRA---IVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYN 73
           ++ + +      D R++L+ F++      +I A++YT +               D L   
Sbjct: 1   MFYAQQNEWVVFDPRRVLEYFKNEQSETTLINAFWYTGLKDP-----QDQRGFRDALISL 55

Query: 74  GFQVVAKVAKEFTE-NCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAAL 132
           G+ V  K+ KE+ + + GR   K+++D+E+ VD F   +  + +V+FSGDG F   +  L
Sbjct: 56  GYTVRTKILKEYCDDSSGRYSQKANLDIEIVVDMFNTVDQYDRVVLFSGDGDFERAIELL 115

Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
           + K   +T+VST      M + +LR   D ++DL  +++ I +  
Sbjct: 116 RSKNTHITVVST----EGMIARELRNATDRYIDLNDIRDRIEKAE 156


>gi|34495828|ref|NP_900043.1| hypothetical protein CV_0373 [Chromobacterium violaceum ATCC 12472]
 gi|34101683|gb|AAQ58051.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
           12472]
          Length = 297

 Score =  110 bits (275), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 48/168 (28%), Gaps = 28/168 (16%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
             K+A+ ID  N  +S           +LL         I    Y        + +    
Sbjct: 3   NRKLAVLIDADNAQSSL--------IAELLAEVAKYGTAIVKRAYGDWTTTQLKGWK--- 51

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122
                      Q      ++F    G    K+S D  L +DA +   +   +   + S D
Sbjct: 52  -------EVLHQYAISPIQQFAYTKG----KNSTDSALIIDAMDLLYTGNFDGFCLVSSD 100

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
             FT L   L+     V  +       S          D F+    L+
Sbjct: 101 SDFTRLATRLREGGLTVIGLGE----QSKTPRPFIAACDKFVFTEILR 144


>gi|21233195|ref|NP_639112.1| hypothetical protein XCC3767 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66770137|ref|YP_244899.1| hypothetical protein XC_3839 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|21115046|gb|AAM43024.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66575469|gb|AAY50879.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. 8004]
          Length = 277

 Score =  110 bits (275), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 52/172 (30%), Gaps = 29/172 (16%)

Query: 3   DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
           +P ++IAL ID  N  A             +L       +      Y        + +  
Sbjct: 4   NPDKRIALLIDADNAPAG--------KIDVVLAEVARYGVANVRRAYGNWKSPHLKSW-- 53

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
                        +   +  ++F  + G    K++ D+ + +DA +   +  L+   I S
Sbjct: 54  --------EAALHEYAIRPIQQFAYSSG----KNASDMAMVIDAMDLLYARNLDGFAIVS 101

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
            D  FT LV  L     KV       +               F  +  L  +
Sbjct: 102 SDADFTPLVMRLLTDGMKVYGFGEKKTPAP-----FVNACSKFTYVEALGEQ 148


>gi|145241746|ref|XP_001393519.1| hypothetical protein ANI_1_1160084 [Aspergillus niger CBS 513.88]
 gi|134078059|emb|CAK40142.1| unnamed protein product [Aspergillus niger]
          Length = 253

 Score =  110 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 46/169 (27%), Gaps = 29/169 (17%)

Query: 3   DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
           D   K A+ ID  N   S            LL              Y         ++  
Sbjct: 4   DSVPKFAVLIDADNAAYSV--------IHPLLAEIARYGTAHAKRAYGDWSSPNLTRWKD 55

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
                        Q   +  ++F    G    K+S D  + +DA +   +   +   + S
Sbjct: 56  QL----------LQHSIEPIQQFAYTYG----KNSTDSAMIIDAMDLLYTRRYDGFCLVS 101

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
            D  FT L A ++     V       +     +       D F+    L
Sbjct: 102 SDSDFTRLAARIRESGLVVYGFGEQKTPKPFVA-----ACDKFIYTENL 145


>gi|297567250|ref|YP_003686222.1| hypothetical protein Mesil_2873 [Meiothermus silvanus DSM 9946]
 gi|296851699|gb|ADH64714.1| protein of unknown function DUF88 [Meiothermus silvanus DSM 9946]
          Length = 213

 Score =  110 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 41/169 (24%), Positives = 82/169 (48%), Gaps = 17/169 (10%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           +IALFIDG+ +Y ++K LG+++D+R+++  F +   +  A+YY  +    +++       
Sbjct: 6   RIALFIDGSYMYNAAKRLGWNVDHRRVIGQFATPEELYNAFYYAPITDSEDERQQK---F 62

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126
           LD L + G+ V ++  +           +   +  +A D    +   +  V+ SG G   
Sbjct: 63  LDALVFMGYTVRSREVR----------GEPRFEALIATDMLITAPRWDRAVVASGAGELA 112

Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
             + AL+ + K++ +V        +    LR QAD F+DL  ++  + R
Sbjct: 113 HALGALRAQGKELYLV----GVAELTDLWLRNQADRFLDLRDMREGLER 157


>gi|239918004|ref|YP_002957562.1| conserved hypothetical protein TIGR00288 [Micrococcus luteus NCTC
           2665]
 gi|281415820|ref|ZP_06247562.1| hypothetical protein MlutN2_11509 [Micrococcus luteus NCTC 2665]
 gi|239839211|gb|ACS31008.1| conserved hypothetical protein TIGR00288 [Micrococcus luteus NCTC
           2665]
          Length = 371

 Score =  110 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 53/175 (30%), Gaps = 34/175 (19%)

Query: 1   MFDPRE---KIALFIDGANLYASSKALGFDIDYRKL-LKAFRSRAIVIRAYYYTTVVGDP 56
           M +P     +IA+ +D  N+            +  L L+   +         Y       
Sbjct: 1   MPEPTPASLRIAVLMDSDNV---------SPKFAPLILEELATYGTPTIKRAYGDWTTTN 51

Query: 57  EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLE 114
              +                   +  ++F    G    K+S D  L +DA +      ++
Sbjct: 52  LNGWKKALNHHA----------IQPVQQFAYTVG----KNSSDSALIIDAMDLLWMGNVD 97

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
              + S D  FT L   L+   K+V  +             LR   D F+ L  L
Sbjct: 98  AFALVSSDSDFTRLATRLREGGKRVIGLGARK-----TPASLRNAVDQFIYLELL 147


>gi|145219215|ref|YP_001129924.1| hypothetical protein Cvib_0400 [Prosthecochloris vibrioformis DSM
           265]
 gi|145205379|gb|ABP36422.1| conserved hypothetical protein [Chlorobium phaeovibrioides DSM 265]
          Length = 247

 Score =  110 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 53/182 (29%), Gaps = 29/182 (15%)

Query: 3   DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
           +  E++A+ ID  N   S            LL              Y        + +  
Sbjct: 4   EKSERLAVLIDADNTQPSI--------IEGLLAEIAKYGTSNVKRIYGDWTSTALKGWK- 54

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
                        +   +  ++F    G  R K++ D  + +DA +   +       I S
Sbjct: 55  ---------EVLLEFSIQPIQQF----GYTRGKNATDSAMIIDAMDLLYTGRFNGFCIVS 101

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
            D  FT L   ++     V       +     S       D F+    L+ +I  +    
Sbjct: 102 SDSDFTKLAVRIRESGLIVYGFGEKKTPAPFVS-----ACDKFIYTEVLREKINENETIK 156

Query: 181 KK 182
           +K
Sbjct: 157 RK 158


>gi|193222199|emb|CAL60349.2| Conserved hypothetical protein [Herminiimonas arsenicoxydans]
          Length = 267

 Score =  110 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 49/172 (28%), Gaps = 29/172 (16%)

Query: 3   DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
           D   ++A+ ID  N  A+            LL              Y          +  
Sbjct: 14  DSTLRLAVLIDADNAQAAV--------IEGLLAEIARFGEATVKRIYGDFTAPTSASWKK 65

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
           +            Q   K  ++F    G    K++ D  L +DA +   +   +   + +
Sbjct: 66  VLQ----------QYAIKPVQQFAYTTG----KNATDSTLIIDAMDLLYTRKFDGFCLIT 111

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
            D  FT L   L+ +   V              D  R     F+    L+ E
Sbjct: 112 SDSDFTGLAMRLREEGLTVLGFGEKK-----TPDAFRNACHKFIFTEVLRPE 158


>gi|67924850|ref|ZP_00518246.1| hypothetical protein CwatDRAFT_1822 [Crocosphaera watsonii WH 8501]
 gi|67853309|gb|EAM48672.1| hypothetical protein CwatDRAFT_1822 [Crocosphaera watsonii WH 8501]
          Length = 235

 Score =  110 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 25/181 (13%), Positives = 53/181 (29%), Gaps = 31/181 (17%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
              ++A+ ID  N+ A+            LL+             Y          +   
Sbjct: 9   SNTRLAVLIDAENVSANI--------IEHLLQEVAKYGTANVKRIYGDWTNSQLNSWKSK 60

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSG 121
                       ++  +  ++F    G    K++ D  L +DA +   +   +   + S 
Sbjct: 61  LN----------KLALQPIQQFRYTTG----KNATDSALIIDAMDLLYTNNFDGFCLVSS 106

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
           D  FT L + ++     V              +      + F+    L     + P  ++
Sbjct: 107 DSDFTRLASRIRESGLIVYGFGE----KVKTPEAFVVACNKFIYTDILAY---KQPSGNQ 159

Query: 182 K 182
           K
Sbjct: 160 K 160


>gi|134093403|ref|YP_001098478.1| hypothetical protein HEAR0113 [Herminiimonas arsenicoxydans]
          Length = 258

 Score =  110 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 49/172 (28%), Gaps = 29/172 (16%)

Query: 3   DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
           D   ++A+ ID  N  A+            LL              Y          +  
Sbjct: 5   DSTLRLAVLIDADNAQAAV--------IEGLLAEIARFGEATVKRIYGDFTAPTSASWKK 56

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
           +            Q   K  ++F    G    K++ D  L +DA +   +   +   + +
Sbjct: 57  VLQ----------QYAIKPVQQFAYTTG----KNATDSTLIIDAMDLLYTRKFDGFCLIT 102

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
            D  FT L   L+ +   V              D  R     F+    L+ E
Sbjct: 103 SDSDFTGLAMRLREEGLTVLGFGEKK-----TPDAFRNACHKFIFTEVLRPE 149


>gi|149922564|ref|ZP_01910994.1| hypothetical protein PPSIR1_41429 [Plesiocystis pacifica SIR-1]
 gi|149816591|gb|EDM76086.1| hypothetical protein PPSIR1_41429 [Plesiocystis pacifica SIR-1]
          Length = 264

 Score =  110 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 64/181 (35%), Gaps = 23/181 (12%)

Query: 6   EKIALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
             IA++ D  N+   +   G+D  D   +L+    R  V+    Y          +    
Sbjct: 9   PNIAVYADYENVALGAIEAGYDAFDIALVLERLLERGNVVVRKAYC--------DWVRYK 60

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLEHLVIFSG 121
                LH   F++V     + +        K+S D+ L VDA + +     +    + +G
Sbjct: 61  GERKRLHERSFELVEVPHVKLSG-------KNSADIRLVVDALDLAHTKAHVGVFALLTG 113

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
           D  F+ LV+ L+   K V  V          S  L    D F+    L  +  RD     
Sbjct: 114 DSDFSPLVSKLRENGKWVVGV----GVRQSTSKLLVEICDEFIYYDDLVRDKRRDGQRRA 169

Query: 182 K 182
           +
Sbjct: 170 R 170


>gi|126656067|ref|ZP_01727451.1| hypothetical protein CY0110_03254 [Cyanothece sp. CCY0110]
 gi|126622347|gb|EAZ93053.1| hypothetical protein CY0110_03254 [Cyanothece sp. CCY0110]
          Length = 235

 Score =  110 bits (274), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 23/168 (13%), Positives = 50/168 (29%), Gaps = 28/168 (16%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           ++A+ ID  N+ A+            LL+             Y     +    +      
Sbjct: 12  RLAVLIDAENVSANI--------IEPLLQEVAKYGTANVKRIYGDWTSNQLNSWKSKLN- 62

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124
                    ++  +  ++F    G    K++ D  L +DA +   +   +   + S D  
Sbjct: 63  ---------KLALQPIQQFRYTTG----KNATDSALIIDAMDLLYTNNFDGFCLVSSDSD 109

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
           FT L + ++     V              +        F+    L ++
Sbjct: 110 FTRLASRIRESGLIVYGFGE----KIKTPEAFVVACSKFIYTDILAHQ 153


>gi|325913823|ref|ZP_08176182.1| hypothetical protein XVE_0042 [Xanthomonas vesicatoria ATCC 35937]
 gi|325539898|gb|EGD11535.1| hypothetical protein XVE_0042 [Xanthomonas vesicatoria ATCC 35937]
          Length = 277

 Score =  109 bits (273), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 51/172 (29%), Gaps = 29/172 (16%)

Query: 3   DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
           +P ++IAL ID  N  A             +L       +      Y        + +  
Sbjct: 4   NPDKRIALLIDADNAPAG--------KIDVVLAEVARYGVANVRRAYGNWKSPHLKGW-- 53

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
                            +  ++F  + G    K++ D+ + +DA +   +  L+   I S
Sbjct: 54  --------EAALHDYAIRPIQQFAYSSG----KNASDMAMVIDAMDLLYARNLDGFAIVS 101

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
            D  FT LV  L     KV       +               F  +  L  +
Sbjct: 102 SDADFTPLVMRLLTDGMKVYGFGEKKTPAP-----FVNACSKFTYVEALGEQ 148


>gi|313676381|ref|YP_004054377.1| hypothetical protein Ftrac_2290 [Marivirga tractuosa DSM 4126]
 gi|312943079|gb|ADR22269.1| hypothetical protein Ftrac_2290 [Marivirga tractuosa DSM 4126]
          Length = 242

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 26/177 (14%), Positives = 57/177 (32%), Gaps = 29/177 (16%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           +A+ IDG N+ ++        + +++++             Y         ++       
Sbjct: 5   LAVLIDGDNIPSA--------NVKEMMEEIAKYGNPTIKRIYGDWTKPNLSKWK------ 50

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDGCF 125
                   +      +++    G    K++ D  + +DA +   S+ +    + S D  F
Sbjct: 51  ----NLLLENAITPIQQYGYTTG----KNATDSAMIIDAMDILYSQKVHGFCLVSSDSDF 102

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182
           T L   L+    KV  +    +             D F+ +  L N+     D   K
Sbjct: 103 TRLATRLREAGMKVYGIGEKKTPNP-----FIVACDKFIYIEILNNQAEETEDTKSK 154


>gi|289705143|ref|ZP_06501547.1| conserved hypothetical protein [Micrococcus luteus SK58]
 gi|289558171|gb|EFD51458.1| conserved hypothetical protein [Micrococcus luteus SK58]
          Length = 360

 Score =  109 bits (273), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 53/175 (30%), Gaps = 34/175 (19%)

Query: 1   MFDPRE---KIALFIDGANLYASSKALGFDIDYRKL-LKAFRSRAIVIRAYYYTTVVGDP 56
           M DP     +IA+ +D  N+            +  L L+   +         Y       
Sbjct: 1   MPDPTPASLRIAVLMDSDNV---------SPKFAPLILEELATYGTPTIKRAYGDWTTTN 51

Query: 57  EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLE 114
              +                   +  ++F    G    K+S D  L +DA +      ++
Sbjct: 52  LNGWKKALNHHA----------IQPVQQFAYTVG----KNSSDSALIIDAMDLLWMGNVD 97

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
              + S D  FT L   L+   K+V  +             LR   D F+ L  L
Sbjct: 98  AFALVSSDSDFTRLATRLREGGKRVIGLGARK-----TPASLRNAVDQFIYLELL 147


>gi|172035458|ref|YP_001801959.1| hypothetical protein cce_0542 [Cyanothece sp. ATCC 51142]
 gi|171696912|gb|ACB49893.1| hypothetical protein cce_0542 [Cyanothece sp. ATCC 51142]
          Length = 235

 Score =  109 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 25/178 (14%), Positives = 55/178 (30%), Gaps = 31/178 (17%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           ++A+ ID  N+ A+            LL+             Y     +    +      
Sbjct: 12  RLAVLIDAENVSANI--------IEALLQEVAKYGTANVKRIYGDWTSNQLNSWKGKLN- 62

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124
                    ++  +  ++F    G    K++ D  L +DA +   +   +   + S D  
Sbjct: 63  ---------KLALQPIQQFRYTTG----KNATDSALIIDAMDLLYTGNFDGFCLVSSDSD 109

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182
           FT L + ++     V              +      + F+    L +   + P  ++K
Sbjct: 110 FTRLASRIRESGLIVYGFGE----KIKTPEAFVVACNKFIYTDILAH---QQPSGNEK 160


>gi|260775864|ref|ZP_05884760.1| hypothetical protein VIC_001249 [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260608280|gb|EEX34449.1| hypothetical protein VIC_001249 [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 290

 Score =  109 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 66/185 (35%), Gaps = 34/185 (18%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
            +KIA+ ID  N   S            +++   S   ++    Y     +  + +    
Sbjct: 45  NKKIAVLIDSDNTPHS--------KLAAIIEELSSFGHIVVKRAYGDFSSERLKNWKQPL 96

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122
                      ++  +  ++F    G    K++ D  + +DA +   S+  +   + S D
Sbjct: 97  N----------ELAIQAKQQFAYTSG----KNATDSLMIIDAMDLLYSQRFDAFALISSD 142

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK-----NEIARDP 177
             FT+L   L+     V  V       +M     +   D F+ +  L+     ++  R P
Sbjct: 143 SDFTSLATRLRESEIHVIGVG-----KAMTPSSFKNACDDFVAIENLQGATEVDDAQRRP 197

Query: 178 DEDKK 182
           +++ +
Sbjct: 198 NQNAE 202


>gi|115360984|ref|YP_778121.1| hypothetical protein Bamb_6243 [Burkholderia ambifaria AMMD]
 gi|115286312|gb|ABI91787.1| protein of unknown function DUF88 [Burkholderia ambifaria AMMD]
          Length = 272

 Score =  109 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 38/165 (23%), Positives = 77/165 (46%), Gaps = 13/165 (7%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA-IVIRAYYYTTVVGDPEQQ---- 59
             ++ +++DG+++ A+   L   + Y  L          + R + Y +       +    
Sbjct: 4   MRRVGVYVDGSSMDANGGHL---MRYEVLRSLAGRAGATIQRLHAYLSFDERRAARSPDY 60

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119
            + +      L   GF+V  K  + + ++ G + VKS+ D+ +A+DA  +S+ L+ ++I 
Sbjct: 61  DARIKGYQAALRDKGFRVTIKPLRHYADDDGTETVKSNSDLGMAIDALSESDRLDTVLIA 120

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
           + DG F  +V ALQ+K  +V ++            +LR  AD F+
Sbjct: 121 TSDGDFVEVVRALQKKGCRVEVLGFD-----NVPLELREAADQFI 160


>gi|320451037|ref|YP_004203133.1| hypothetical protein TSC_c19750 [Thermus scotoductus SA-01]
 gi|320151206|gb|ADW22584.1| hypothetical protein TSC_c19750 [Thermus scotoductus SA-01]
          Length = 182

 Score =  109 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 83/170 (48%), Gaps = 17/170 (10%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           ++ALFIDG+ +Y ++K LG+++D+R++L  F +   +  A+YY  +    +++       
Sbjct: 2   RVALFIDGSYMYLATKRLGWNVDHRRVLTQFATPEQLYNAFYYVPITDPEDERQQR---F 58

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126
           +D L + G+ V +++ +           ++  +  +A D    +   +  ++ SG G   
Sbjct: 59  IDALVFMGYTVRSRLVR----------GEARFEAMMATDLLTTAPRWDRAIVASGSGELA 108

Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
              + L+   K++ ++        +A  +LR QAD F++L   +  + R 
Sbjct: 109 HTFSTLRAMGKEIHLL----GVHELADLELRNQADRFLNLPEWREVLERT 154


>gi|289664829|ref|ZP_06486410.1| hypothetical protein XcampvN_17615 [Xanthomonas campestris pv.
           vasculorum NCPPB702]
 gi|289671395|ref|ZP_06492470.1| hypothetical protein XcampmN_23667 [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 276

 Score =  109 bits (272), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 51/172 (29%), Gaps = 29/172 (16%)

Query: 3   DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
           +P ++IAL ID  N  A             +L       +      Y        + +  
Sbjct: 6   NPDKRIALLIDADNAPAG--------KIDVVLAEVARYGVANVRRAYGNWKSPHLKGW-- 55

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
                            +  ++F  + G    K++ D+ + +DA +   +  L+   I S
Sbjct: 56  --------EAALHDYAIRPIQQFAYSSG----KNASDMAMVIDAMDLLYARNLDGFAIVS 103

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
            D  FT LV  L     KV       +               F  +  L  +
Sbjct: 104 SDADFTPLVMRLLTDGMKVYGFGEKKTPAP-----FVNACSKFTYVEALGEQ 150


>gi|313681619|ref|YP_004059357.1| hypothetical protein Sulku_0490 [Sulfuricurvum kujiense DSM 16994]
 gi|313154479|gb|ADR33157.1| protein of unknown function DUF88 [Sulfuricurvum kujiense DSM
           16994]
          Length = 246

 Score =  108 bits (271), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 51/172 (29%), Gaps = 29/172 (16%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M D + ++A+ ID  N   S            L+    +  I      Y        + +
Sbjct: 1   MIDDQARLAVLIDADNSQPSI--------IAGLMDEIAAHGIASVKRIYGDWTDTKLKGW 52

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118
                          +      ++F    G    K++ D  + +DA +   ++  +   I
Sbjct: 53  K----------NALLEHGLHPMQQFAYTTG----KNATDSAMIIDAMDLLYTKNFDGFCI 98

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
            S D  FT L + ++    KV                     D F+    L+
Sbjct: 99  VSSDSDFTRLASRIRESGIKVYGFGEQK-----TPKAFIGVCDKFIYTENLR 145


>gi|114330619|ref|YP_746841.1| hypothetical protein Neut_0604 [Nitrosomonas eutropha C91]
 gi|114307633|gb|ABI58876.1| conserved hypothetical protein [Nitrosomonas eutropha C91]
          Length = 268

 Score =  108 bits (271), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 47/167 (28%), Gaps = 29/167 (17%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           ++A+ ID  N  A+            LL              Y          +  +   
Sbjct: 18  RLAVLIDADNAQAAV--------IEGLLAEIARFGEATVKRIYGDFTAPASASWKKVLQ- 68

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124
                    +   K  ++F    G    K++ D  L +DA +   +   +   + + D  
Sbjct: 69  ---------RHAIKPVQQFAYTTG----KNATDSTLIIDAMDLLYTRKFDGFCLITSDSD 115

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
           FT L   L+ +   V              +  R     F+    L+ 
Sbjct: 116 FTGLAMRLREEGLTVFGFGEKK-----TPEAFRNACHKFIFTEILRP 157


>gi|188993344|ref|YP_001905354.1| hypothetical protein xccb100_3949 [Xanthomonas campestris pv.
           campestris str. B100]
 gi|167735104|emb|CAP53316.1| Conserved hypothetical protein [Xanthomonas campestris pv.
           campestris]
          Length = 277

 Score =  108 bits (271), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 52/172 (30%), Gaps = 29/172 (16%)

Query: 3   DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
           +P ++IAL ID  N  A             +L       +      Y        + +  
Sbjct: 4   NPDKRIALLIDADNAPAG--------KIDVVLAEVARYGVANVRRAYGNWKSPHLKSW-- 53

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
                        +   +  ++F  + G    K++ D+ + +DA +   +  L+   I S
Sbjct: 54  --------EAALHEYAIRPIQQFAYSSG----KNASDMAMVIDAMDLLYARNLDGFAIVS 101

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
            D  FT LV  L     KV       +               F  +  L  +
Sbjct: 102 SDADFTPLVMRLLTDGMKVYGFGEKKTLAP-----FVNACSKFTYVEALGEQ 148


>gi|148550669|ref|YP_001260108.1| hypothetical protein Swit_5232 [Sphingomonas wittichii RW1]
 gi|148503088|gb|ABQ71341.1| protein of unknown function DUF88 [Sphingomonas wittichii RW1]
          Length = 284

 Score =  108 bits (271), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 55/170 (32%), Gaps = 29/170 (17%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
           P  +IAL ID  N+  +            +L              Y        + ++  
Sbjct: 11  PTRRIALLIDADNVSHA--------KIGAILAELSKYGTANIRRAYGNWAAATLKGWTGK 62

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSG 121
                           +  ++F+ + G    K++ D+ L +DA E   ++ L+   I S 
Sbjct: 63  LHDFA----------IRPIQQFSYSTG----KNATDIALVIDAMELLYTQDLDAFAIASS 108

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
           D  FT L+  L+    +V       +               F+ L  L++
Sbjct: 109 DADFTPLIMQLKANGHEVYGFGERKTPTP-----FVNACTTFLFLDGLED 153


>gi|317050842|ref|YP_004111958.1| hypothetical protein Selin_0654 [Desulfurispirillum indicum S5]
 gi|316945926|gb|ADU65402.1| hypothetical protein Selin_0654 [Desulfurispirillum indicum S5]
          Length = 290

 Score =  108 bits (271), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 42/165 (25%), Positives = 79/165 (47%), Gaps = 13/165 (7%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA-IVIRAYYYTTVVGDPEQQFSP 62
              K+ +++D ANL    +  G+ + Y  L +        ++R   Y +   D   + +P
Sbjct: 17  SNAKVGVYVDVANL---VRNGGYGMRYEVLREFACRDGAELVRLNAYVSFDVDRASKDAP 73

Query: 63  LHP----LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVI 118
                      L   G++V+ K  K + +  G +  K++ D+++AVDA  QSE L+ +++
Sbjct: 74  YKYKMTNFYAILRDFGYKVIEKPVKWYVDESGNRFGKANADLDMAVDALLQSENLDRVLL 133

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163
            +GDG F  +V ALQ K  +V  ++         S  L++++D F
Sbjct: 134 VTGDGDFVQVVRALQNKGCRVETMAF-----QNISSDLKKESDMF 173


>gi|224371902|ref|YP_002606068.1| hypothetical protein HRM2_48560 [Desulfobacterium autotrophicum
           HRM2]
 gi|223694621|gb|ACN17904.1| conserved hypothetical protein [Desulfobacterium autotrophicum
           HRM2]
          Length = 239

 Score =  108 bits (271), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 58/183 (31%), Gaps = 33/183 (18%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
            +K+A+ ID  N  AS  +        +LL       +      Y        + +    
Sbjct: 6   NQKLAVMIDADNAQASICS--------ELLAEIAKFGVASVKRAYGDWTTSHLKGWKEHL 57

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGD 122
                      +   +  ++F+   G    K+S D  L +DA +      L+   + S D
Sbjct: 58  H----------KHAIQPIQQFSYTIG----KNSTDSSLIIDAMDLLHEQRLDGFCLVSSD 103

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE----IARDPD 178
             FT L   ++     V              +      D F+    L+ +    I R+ D
Sbjct: 104 SDFTRLATRIRESGLTVYGFGEKK-----TPEAFVSACDKFVYTEILRPQNKDNIPRESD 158

Query: 179 EDK 181
           E +
Sbjct: 159 ETE 161


>gi|320590086|gb|EFX02531.1| hypothetical protein CMQ_5892 [Grosmannia clavigera kw1407]
          Length = 261

 Score =  108 bits (271), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 59/185 (31%), Gaps = 31/185 (16%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M +   K+A+ ID  N      A    +D   LL              Y    G    ++
Sbjct: 1   MANAT-KLAVLIDADN------APPTKVDL--LLAEVSKYGTAHVKRAYGDWTGQGLTKW 51

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118
                       N  +   +  ++F    G    K++ D  + +DA +   +  L+   I
Sbjct: 52  K----------DNLLRHSIQPIQQFAYTQG----KNATDSAMIIDAMDLLYTNRLDGFCI 97

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL-KNEIARDP 177
            S D  FT L + ++     V       +     S       D F+    L K+E+   P
Sbjct: 98  VSSDSDFTRLASRIRESGLTVFGFGEKKTPQPFVS-----ACDKFIYFEILNKDEVVHSP 152

Query: 178 DEDKK 182
               K
Sbjct: 153 TATSK 157


>gi|110596945|ref|ZP_01385235.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031]
 gi|110341632|gb|EAT60092.1| conserved hypothetical protein [Chlorobium ferrooxidans DSM 13031]
          Length = 247

 Score =  108 bits (270), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 54/182 (29%), Gaps = 29/182 (15%)

Query: 3   DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
           +  E++A+ ID  N   +            LL              Y        + +  
Sbjct: 4   EKTERLAVLIDADNTQPAI--------IEGLLAEVAKYGTANVKRIYGDWTTTALRGWK- 54

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
                        +   +  ++F    G    K++ D  + +DA +   +   +   I S
Sbjct: 55  ---------EVLLEFSIQPIQQFGYTKG----KNATDSAMIIDAMDLLYTGKFQGFCIVS 101

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
            D  FT L + ++     V       +     S       D F+    L+ ++  +    
Sbjct: 102 SDSDFTKLASRIRESGLTVYGFGEKKTPGPFVS-----ACDKFIYTEVLRLKLNENEPIA 156

Query: 181 KK 182
           +K
Sbjct: 157 RK 158


>gi|91786924|ref|YP_547876.1| hypothetical protein Bpro_1025 [Polaromonas sp. JS666]
 gi|91696149|gb|ABE42978.1| protein of unknown function DUF88 [Polaromonas sp. JS666]
          Length = 260

 Score =  108 bits (270), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 56/172 (32%), Gaps = 29/172 (16%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            D + ++AL ID  N  AS       ID   +L    +         Y        + + 
Sbjct: 1   MDHKPRVALLIDADNSPAS------KIDL--ILNELSTFGETNIRRAYGNWKKSELKGW- 51

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIF 119
                         +   +  ++F  + G    K++ D+ + +DA E   ++  +   I 
Sbjct: 52  ---------EEALHEHAIRPMQQFDYSKG----KNASDMAMVIDALELLYTDRPDAFGIV 98

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
           S D  FT LV  L+ K   V       +               F+ L  L+ 
Sbjct: 99  SSDADFTPLVMHLRAKGAAVYGFGAQKTPEP-----FVNACSKFLFLDKLRP 145


>gi|262375022|ref|ZP_06068256.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
 gi|262310035|gb|EEY91164.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
          Length = 269

 Score =  108 bits (270), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 57/181 (31%), Gaps = 29/181 (16%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
             +K A+ ID  N   ++           +L+      I      Y     +  +++   
Sbjct: 6   QTKKFAVLIDADNSSINA--------ISSVLEEVAKYGIASVKRVYGDWSSETLKKW--- 54

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSG 121
                              ++F    G    K + D+ L +DA +   +  L+   I S 
Sbjct: 55  -------RDVLLPHAITPVQQFAYTKG----KDATDMILIIDAMDLLYAGALDGFCIVSS 103

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
           D  FT L + ++     V              +  ++  D F+ +  L  +     +ED 
Sbjct: 104 DSDFTPLASRIRENGLTVYGFG-----KKATPEAFKKACDKFIYIENLLVDSEIKNNEDG 158

Query: 182 K 182
           +
Sbjct: 159 E 159


>gi|238023177|ref|ZP_04603603.1| hypothetical protein GCWU000324_03103 [Kingella oralis ATCC 51147]
 gi|237865560|gb|EEP66700.1| hypothetical protein GCWU000324_03103 [Kingella oralis ATCC 51147]
          Length = 258

 Score =  108 bits (270), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 56/165 (33%), Gaps = 29/165 (17%)

Query: 6   EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
           + +A+FID  N+ A        ID+  ++    +   V+    Y     +  + +     
Sbjct: 8   KTVAVFIDADNVPA------KKIDF--IISELANYGAVMVRKIYGNWKSERLKGW----- 54

Query: 66  LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDG 123
                            ++F    G    K++ D+ L +D  +   S  ++   I S D 
Sbjct: 55  -----EEVLLDYALAPVQQFDYAKG----KNATDMALTIDVMDMLYSGKIDVFCIVSSDS 105

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
            FT L   ++ + K+V             S  L    + F+ L  
Sbjct: 106 DFTPLAMRVKTEGKQVIGFG-----RHSTSKALVAACNKFLFLDD 145


>gi|146308706|ref|YP_001189171.1| hypothetical protein Pmen_3691 [Pseudomonas mendocina ymp]
 gi|145576907|gb|ABP86439.1| hypothetical protein Pmen_3691 [Pseudomonas mendocina ymp]
          Length = 272

 Score =  108 bits (270), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 26/169 (15%), Positives = 48/169 (28%), Gaps = 29/169 (17%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
             + +A+ ID  N  A+            L +      +      Y          +   
Sbjct: 10  QHKHLAVLIDADNAPAAI--------VEGLFEEIAKYGVASVKRIYGDWTQPNLGSWKK- 60

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSG 121
                           +  ++F    G    K++ D  L +DA +   +   +   + S 
Sbjct: 61  ---------VLLDHSIQPIQQFAYTKG----KNATDSSLIIDAMDLLYTRRFDGFCLVSS 107

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
           D  FT L A L+ +   V       +     S       D F+    L+
Sbjct: 108 DSDFTRLAARLREEGLTVYGFGEEKTPSPFVS-----ACDKFIYTEILR 151


>gi|323343191|ref|ZP_08083422.1| protein of hypothetical function DUF88 [Erysipelothrix
           rhusiopathiae ATCC 19414]
 gi|322463255|gb|EFY08450.1| protein of hypothetical function DUF88 [Erysipelothrix
           rhusiopathiae ATCC 19414]
          Length = 241

 Score =  108 bits (270), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 48/165 (29%), Gaps = 29/165 (17%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           +IA+ ID  N+  +        +   +L+             Y          +      
Sbjct: 8   RIAVLIDAENVPYA--------NIGGVLREVARYGTPTVKRIYGDWTKQTASGWKSHL-- 57

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDGC 124
                    +      ++++   G    K+S D  + +DA +      +E   I S D  
Sbjct: 58  --------LEHAITPIQQYSYTTG----KNSSDSAMIIDAMDILYEGNVESFCIVSSDSD 105

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
           FT L   L+   K V  +                  D F+ +  +
Sbjct: 106 FTRLAVRLREAGKYVIGIGEQK-----TPSAFIASCDKFIYIEII 145


>gi|91772560|ref|YP_565252.1| hypothetical protein Mbur_0520 [Methanococcoides burtonii DSM 6242]
 gi|91711575|gb|ABE51502.1| Hypothetical protein Mbur_0520 [Methanococcoides burtonii DSM 6242]
          Length = 262

 Score =  108 bits (270), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 54/171 (31%), Gaps = 29/171 (16%)

Query: 3   DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
           +  +K+A+ ID  N+++S          + L        I      Y    G     +  
Sbjct: 5   ESHDKLAVLIDADNVHSSI--------IKGLFDEIAKYGIASVKRLYGDWTGPQLSNWK- 55

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
                     N      +  ++F+        K++ D  L +DA +   +  L+   I S
Sbjct: 56  ---------DNLHIYSIQPIQQFSY----TAKKNATDSALIIDAMDLLYTRNLDGFCIVS 102

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
            D  +T L   ++     V              +  R   + F+ +  L+ 
Sbjct: 103 SDSDYTKLCQRIRESGAFVYGFGEKK-----TPEAFRAACNKFIYVENLRK 148


>gi|332139693|ref|YP_004425431.1| hypothetical protein MADE_1001420 [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327549715|gb|AEA96433.1| hypothetical protein MADE_1001420 [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 249

 Score =  108 bits (270), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 56/170 (32%), Gaps = 29/170 (17%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            D  +K+A+ ID  N   S            +L    +   V+    Y     D  + + 
Sbjct: 4   LDVHKKVAVLIDADNAQLS--------KLSAILDEISAHGHVLIKRAYGDWSIDALKNWK 55

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIF 119
                         ++  +  ++F    G    K++ D  + +DA +   SE ++   + 
Sbjct: 56  TPLN----------ELAIQPIQQFAYTTG----KNATDASMIIDAMDLLYSEKIDAFALV 101

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
           S D  FT L + L+   K V  V              R   D F+    L
Sbjct: 102 SSDSDFTKLASRLRESEKFVFGVGEKK-----TPVSFRNACDDFIFTENL 146


>gi|332829851|gb|EGK02493.1| hypothetical protein HMPREF9455_01450 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 251

 Score =  108 bits (270), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 53/172 (30%), Gaps = 30/172 (17%)

Query: 1   MFDPRE-KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
           M    + K+A+ ID  N+  S        + + +L       I      Y          
Sbjct: 1   MVPKSDMKLAVLIDADNIPYS--------NIKGMLDEITKFGIPTIKRIYGDWTKPSVSG 52

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLV 117
           +               +      ++++   G    K++ D  + +DA +   S+ ++   
Sbjct: 53  WKQPL----------LEHAITPIQQYSYTTG----KNATDSAMIIDAMDILHSDKVDGFC 98

Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
           + S D  FT L   L+     V  +    +             D F+ +  L
Sbjct: 99  LVSSDSDFTRLAVRLRESGMFVLGLGEKKTPNP-----FIVACDKFIYIEIL 145


>gi|221195605|ref|ZP_03568659.1| conserved hypothetical protein [Atopobium rimae ATCC 49626]
 gi|221184371|gb|EEE16764.1| conserved hypothetical protein [Atopobium rimae ATCC 49626]
          Length = 256

 Score =  108 bits (269), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 37/175 (21%), Positives = 64/175 (36%), Gaps = 24/175 (13%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           +  P+  IA+FID  N    S   G     + + +    +  +     Y          +
Sbjct: 4   ITTPQSSIAVFIDYENFPVGSN--GSRGALKLVFERLVDKGRITIKRAYC--------DW 53

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLV 117
           S    +   LH  G +++             ++ K+S D+ LAVDA E     + ++   
Sbjct: 54  SRHEAVKPALHELGVELIEIP-------DNSQKGKNSADIHLAVDALEACLTKDHIDTFA 106

Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
           I SGD  F+ LVA L+   K V  +          +  L    D F+    +  +
Sbjct: 107 ILSGDSDFSPLVAKLKEYDKTVIGIGRKKG----TASLLENVCDEFIFYEDIAKK 157


>gi|149376066|ref|ZP_01893832.1| hypothetical protein MDG893_03770 [Marinobacter algicola DG893]
 gi|149359703|gb|EDM48161.1| hypothetical protein MDG893_03770 [Marinobacter algicola DG893]
          Length = 248

 Score =  108 bits (269), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 29/183 (15%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            +  +KIA+ ID  N   S            +++   S   V+    Y     D  + + 
Sbjct: 4   LEQHKKIAVLIDADNAQLS--------KLPLIIEELSSHGHVVVKRAYGDWSIDSLKNWK 55

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIF 119
            +            ++  +  ++F    G    K++ D  + +DA +   S   +   + 
Sbjct: 56  TVLN----------ELAIQPIQQFAYTKG----KNATDASMIIDAMDLLYSSKFDAFALV 101

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
           S D  FT L + L+     V                 R   D F+    L+      PDE
Sbjct: 102 SSDSDFTKLASRLRESEIYVFGFGEKK-----TPVSFRSACDDFLFTENLEYPEEVAPDE 156

Query: 180 DKK 182
             K
Sbjct: 157 PAK 159


>gi|326802048|ref|YP_004319867.1| hypothetical protein Sph21_4688 [Sphingobacterium sp. 21]
 gi|326552812|gb|ADZ81197.1| Domain of unknown function DUF88 [Sphingobacterium sp. 21]
          Length = 272

 Score =  108 bits (269), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 49/164 (29%), Gaps = 29/164 (17%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           IA+ ID  N+ ++            +L   +          Y          +       
Sbjct: 12  IAVLIDADNVSST--------KIEGILDEVKRHGTPSIKRIYGDWTSTYVAGWK------ 57

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDGCF 125
                          ++++   G    K++ D  L +DA +   ++ ++   I S D  F
Sbjct: 58  ----EPLLTHAITPIQQYSYTTG----KNATDSALIIDAMDILHTQKVDGFCIVSSDSDF 109

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
           T L   L+   K V  +    +             D F+ +  L
Sbjct: 110 TRLAIRLRESGKLVLGIGQKKTPKP-----FIAACDKFIYIEIL 148


>gi|297622586|ref|YP_003704020.1| hypothetical protein Trad_0338 [Truepera radiovictrix DSM 17093]
 gi|297163766|gb|ADI13477.1| protein of unknown function DUF88 [Truepera radiovictrix DSM 17093]
          Length = 198

 Score =  108 bits (269), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 40/172 (23%), Positives = 77/172 (44%), Gaps = 10/172 (5%)

Query: 4   PREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
           P +++ LF+D  NLY +++      +DY  +LK       ++ A  Y          +  
Sbjct: 34  PEQRVGLFVDTQNLYYAARDIYSRHVDYAVMLKLSERSRHLVHATAYVVEREGEATAY-- 91

Query: 63  LHPLLDWLHYNGFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
               +  L   G++V  +  +    ++ GR  ++   D+ +A D     + L+ +V+ SG
Sbjct: 92  --GFVTKLSALGYRVRRRKVRVHRADSGGRPVLEGDWDMGIAADIVRAWDYLDVIVLASG 149

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
           DG F  ++   Q++ K+V +++        AS  L   AD FM LA + +  
Sbjct: 150 DGDFAPMLELAQQRGKRVEVLAF----REAASQNLLDLADAFMGLADVPDIF 197


>gi|288573726|ref|ZP_06392083.1| protein of unknown function DUF88 [Dethiosulfovibrio peptidovorans
           DSM 11002]
 gi|288569467|gb|EFC91024.1| protein of unknown function DUF88 [Dethiosulfovibrio peptidovorans
           DSM 11002]
          Length = 274

 Score =  108 bits (269), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 50/180 (27%), Gaps = 29/180 (16%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
           + ++A+ ID  N   S            LL       +      Y          +    
Sbjct: 8   QPRLAVLIDADNARPSIT--------EPLLAEVAKYGVASVKRIYGDWTTPNLGGWKT-- 57

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122
                      +   +  ++F    G    K++ D  + +DA +   +   +   + S D
Sbjct: 58  --------VLLEHSIQPIQQFRYTVG----KNATDSAMIIDAMDLLFTNRFDGFCLVSSD 105

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182
             FT L A ++     V       +     S       D F+    +       P   K+
Sbjct: 106 SDFTRLAARIREAGLMVYGFGEKKTPKPFVS-----ACDKFIYTEVISVNKEDSPSAIKR 160


>gi|325928676|ref|ZP_08189851.1| hypothetical protein XPE_3939 [Xanthomonas perforans 91-118]
 gi|325540954|gb|EGD12521.1| hypothetical protein XPE_3939 [Xanthomonas perforans 91-118]
          Length = 280

 Score =  108 bits (269), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 50/169 (29%), Gaps = 29/169 (17%)

Query: 3   DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
           +P ++IAL ID  N  A             +L       +      Y        + +  
Sbjct: 6   NPDKRIALLIDADNAPAG--------KIDVVLAEVARYGVANVRRAYGNWKSPHLKGW-- 55

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
                            +  ++F  + G    K++ D+ + +DA +   +  L+   I S
Sbjct: 56  --------EAALHDYAIRPIQQFAYSSG----KNASDMAMVIDAMDLLYARNLDGFAIVS 103

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
            D  FT LV  L     KV       +               F  +  L
Sbjct: 104 SDADFTPLVMRLLTDGMKVYGFGEKKTPAP-----FVNACSKFTYVEAL 147


>gi|257455528|ref|ZP_05620760.1| conserved hypothetical protein [Enhydrobacter aerosaccus SK60]
 gi|257447097|gb|EEV22108.1| conserved hypothetical protein [Enhydrobacter aerosaccus SK60]
          Length = 350

 Score =  108 bits (269), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 56/171 (32%), Gaps = 28/171 (16%)

Query: 3   DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
           D   K+A+ ID  N  +S+K          +L+      +      Y     +  + +  
Sbjct: 8   DNSAKLAVLIDADN--SSAKK------IPLILQEVAKYGVASVKRVYGDWSSENLKNW-- 57

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
                               ++F    G    K + D+ L ++A +   S+ L+   I S
Sbjct: 58  --------RDVLLPHAITPVQQFAYTSG----KDATDMMLIINAMDLLYSKALDGFCIVS 105

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
            D  FT L + ++     V          S   +      D F+ +  L++
Sbjct: 106 SDSDFTPLASRIRESGLVVYGFGE----KSKTPEAFINACDKFIYIENLED 152


>gi|221065080|ref|ZP_03541185.1| protein of unknown function DUF88 [Comamonas testosteroni KF-1]
 gi|220710103|gb|EED65471.1| protein of unknown function DUF88 [Comamonas testosteroni KF-1]
          Length = 300

 Score =  108 bits (269), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 56/174 (32%), Gaps = 30/174 (17%)

Query: 1   MFDP-REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
           M +  + +IAL ID  N      A    ID  ++L    +  ++     Y          
Sbjct: 1   MPNDVQPRIALLIDADN------APAEMID--EILTELSTFGLINIRRAYGNWTKAGLHG 52

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLV 117
           +               +   +  ++F  + G    K++ D+ + VDA E   +E  +   
Sbjct: 53  WQSKL----------LEYAVRPMQQFDYSKG----KNATDMAMTVDAMELLYTEKPDAFG 98

Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
           I S D  FT LV  L+ K   V                       F+    LK 
Sbjct: 99  IVSSDADFTPLVMHLRAKGAAVYGFG-----AEQTPKAFVNACSRFLYFDALKE 147


>gi|84625703|ref|YP_453075.1| hypothetical protein XOO_4046 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|84369643|dbj|BAE70801.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 276

 Score =  108 bits (269), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 51/169 (30%), Gaps = 29/169 (17%)

Query: 3   DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
           +P ++IAL ID  N  A             +L       +      Y        +++  
Sbjct: 6   NPDKRIALLIDADNAPAG--------KIDVVLAEVARYGVANVRRAYGNWKSPHLKRW-- 55

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
                            +  ++F  + G    K++ D+ + +DA +   +  L+   I S
Sbjct: 56  --------EAALHDYAIRPIQQFAYSSG----KNASDMAMVIDAMDLLYARNLDGFAIVS 103

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
            D  FT LV  L     KV       +               F  +  L
Sbjct: 104 SDADFTPLVMRLLTDGMKVYGFGEKKTPAP-----FVNACSKFTYVEAL 147


>gi|294056251|ref|YP_003549909.1| protein of unknown function DUF88 [Coraliomargarita akajimensis DSM
           45221]
 gi|293615584|gb|ADE55739.1| protein of unknown function DUF88 [Coraliomargarita akajimensis DSM
           45221]
          Length = 253

 Score =  108 bits (269), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 30/183 (16%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M    E IAL ID  N  A+       ID+  ++    S   V     Y          +
Sbjct: 1   MPQTNESIALLIDADNAPAA------KIDF--IISELASYGTVNIRRAYGNWKKAGLSGW 52

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVI 118
                          +   +  + F    G    K++ D+ L +DA +   ++ ++   +
Sbjct: 53  ----------EKVLHEHSIQPVQLFDLTKG----KNATDMALLIDAMDILYTKEVQTFCL 98

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
            + D  FT L   L+   K+V    +  +              +F  L        + P+
Sbjct: 99  VTSDCDFTPLCQRLRADGKRVLGFGSKTAPAP-----FVNSCSHFHYLDG-GPSKKQTPN 152

Query: 179 EDK 181
           E K
Sbjct: 153 ELK 155


>gi|269954862|ref|YP_003324651.1| hypothetical protein Xcel_0052 [Xylanimonas cellulosilytica DSM
           15894]
 gi|269303543|gb|ACZ29093.1| protein of unknown function DUF88 [Xylanimonas cellulosilytica DSM
           15894]
          Length = 470

 Score =  107 bits (268), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 37/175 (21%), Positives = 66/175 (37%), Gaps = 23/175 (13%)

Query: 2   FDPREKIALFIDGANLYASSKAL--GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
            D  E++A+F+D  NL   ++    G   D+  +  A   R  V+    Y          
Sbjct: 1   MDNEERLAVFLDYENLALGAREHLGGMQFDFGPIADALAVRGRVVVRRAYA--------D 52

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHL 116
           +S        L  +  +++    +           K++ D+++ VDA E +   E +   
Sbjct: 53  WSYFDEDRRALTRHQVELIEMPQRM------GASRKNAADIKMVVDAIEMAFEREYISTF 106

Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
           V+ +GD  F+ LV  L+   K+V  V          S  L    D F+    L+ 
Sbjct: 107 VMCTGDSDFSPLVHKLRELNKRVIGV----GVEKSTSRLLPASCDEFLFYDRLEG 157


>gi|188574761|ref|YP_001911690.1| hypothetical protein PXO_03707 [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|188519213|gb|ACD57158.1| protein of unknown function [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 276

 Score =  107 bits (268), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 51/169 (30%), Gaps = 29/169 (17%)

Query: 3   DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
           +P ++IAL ID  N  A             +L       +      Y        +++  
Sbjct: 6   NPDKRIALLIDADNAPAG--------KIDVVLAEVARYGVANVRRAYGNWKSPHLKRW-- 55

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
                            +  ++F  + G    K++ D+ + +DA +   +  L+   I S
Sbjct: 56  --------EAALHDYAIRPIQQFAYSSG----KNASDMAMVIDAMDLLYARNLDGFAIVS 103

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
            D  FT LV  L     KV       +               F  +  L
Sbjct: 104 SDADFTPLVMRLLTDGMKVYGFGEKKTPAP-----FVNACSKFTYVEAL 147


>gi|78049501|ref|YP_365676.1| hypothetical protein XCV3945 [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|78037931|emb|CAJ25676.1| conserved hypothetical protein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 273

 Score =  107 bits (268), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 50/169 (29%), Gaps = 29/169 (17%)

Query: 3   DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
           +P ++IAL ID  N  A             +L       +      Y        + +  
Sbjct: 4   NPDKRIALLIDADNAPAG--------KIDVVLAEVARYGVANVRRAYGNWKSPHLKGW-- 53

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
                            +  ++F  + G    K++ D+ + +DA +   +  L+   I S
Sbjct: 54  --------EAALHDYAIRPIQQFAYSSG----KNASDMAMVIDAMDLLYARNLDGFAIVS 101

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
            D  FT LV  L     KV       +               F  +  L
Sbjct: 102 SDADFTPLVMRLLTDGMKVYGFGEKKTPAP-----FVNACSKFTYVEAL 145


>gi|193212130|ref|YP_001998083.1| hypothetical protein Cpar_0461 [Chlorobaculum parvum NCIB 8327]
 gi|193085607|gb|ACF10883.1| protein of unknown function DUF88 [Chlorobaculum parvum NCIB 8327]
          Length = 450

 Score =  107 bits (268), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 57/184 (30%), Gaps = 29/184 (15%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M   RE IA+ ID  N      +    ID+  +L       +V     Y        + +
Sbjct: 1   MEHSRETIAMLIDADN------SPSDKIDF--ILSEMAKYGVVNIRRAYGNWKSHSLKGW 52

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118
                              +  ++F    G    K++ D+ + +DA +   S+ L+   I
Sbjct: 53  ----------EDKLHDYAIRPIQQFDYTKG----KNATDMAMTIDAMDLLYSKKLDAFCI 98

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
            S D  FT LV  +  +   V       +               F+ +        +  +
Sbjct: 99  VSSDSDFTPLVMRILSEGLNVYGFGQKSAPAP-----FVNACSTFLYVESFCGGQEKTKN 153

Query: 179 EDKK 182
           +  +
Sbjct: 154 DSGR 157


>gi|115526363|ref|YP_783274.1| hypothetical protein RPE_4370 [Rhodopseudomonas palustris BisA53]
 gi|115520310|gb|ABJ08294.1| protein of unknown function DUF88 [Rhodopseudomonas palustris
           BisA53]
          Length = 253

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 56/177 (31%), Gaps = 31/177 (17%)

Query: 1   MFDPR--EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58
           M   +   + A+ ID  N   S++  G       L +             Y        +
Sbjct: 1   MPHQKRLPRFAVLIDADN--TSAQIAG------GLFEEVAKFGEASVRRIYGDFSTPQLK 52

Query: 59  QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHL 116
            ++ +            +      +++    G    K++ D+ L +DA +   S   +  
Sbjct: 53  SWAEILQ----------KHAIDPYQQYAYTKG----KNASDIALVIDAMDLLHSGRFDGF 98

Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
            + S D  FT L + L+ +   V    T         +  R+    F+    L  E+
Sbjct: 99  CLVSSDSDFTRLASRLREQGADVYGFGT-----QCTPESFRQACRRFIYTENLLPEV 150


>gi|320352193|ref|YP_004193532.1| hypothetical protein Despr_0047 [Desulfobulbus propionicus DSM
           2032]
 gi|320120695|gb|ADW16241.1| hypothetical protein Despr_0047 [Desulfobulbus propionicus DSM
           2032]
          Length = 258

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 40/165 (24%), Positives = 78/165 (47%), Gaps = 13/165 (7%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIV-IRAYYYTTVVGDPEQQ---- 59
             K A+++D  N+  S    G+ + Y  L+    +   V +RA  Y     +  Q+    
Sbjct: 1   MLKTAIYVDAENIKMSG---GYGMRYDVLVDLANNTNSVMLRANCYLAEDHERTQRDAEY 57

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119
              ++   + L   GF+++ K  + F +  G    K++ D++LA+DA  Q+  L+ +++ 
Sbjct: 58  RQKVYSYHNILRQCGFKIIKKYVRRFKDEDGNITTKANADMDLAIDALLQARNLDRIILL 117

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
           +GDG F  L+ ALQ    +V ++          + +LR  AD ++
Sbjct: 118 TGDGDFLRLIIALQNMGCRVEVIGF-----HNVNKELREVADSYI 157


>gi|330504910|ref|YP_004381779.1| hypothetical protein MDS_3996 [Pseudomonas mendocina NK-01]
 gi|328919196|gb|AEB60027.1| hypothetical protein MDS_3996 [Pseudomonas mendocina NK-01]
          Length = 274

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 25/174 (14%), Positives = 51/174 (29%), Gaps = 29/174 (16%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
             +  A+ ID  N  A+            L +      +      Y          +   
Sbjct: 10  QHKHFAVLIDADNAPAAI--------VEGLFEEIAKYGVASVKRIYGDWTQPNLGSWKK- 60

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSG 121
                           +  ++F    G    K++ D  L +DA +   +   +   + S 
Sbjct: 61  ---------VLLDHSIQPIQQFAYTKG----KNATDSSLIIDAMDLLYTRRFDGFCLVSS 107

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
           D  FT L A L+ +  +V       +          +  D F+    L+++ + 
Sbjct: 108 DSDFTRLAARLREEGLEVIGFGEQKTPQP-----FVKACDTFIYTELLRDDASE 156


>gi|256396571|ref|YP_003118135.1| hypothetical protein Caci_7469 [Catenulispora acidiphila DSM 44928]
 gi|256362797|gb|ACU76294.1| protein of unknown function DUF88 [Catenulispora acidiphila DSM
           44928]
          Length = 260

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 48/166 (28%), Gaps = 29/166 (17%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           K+A+ ID  N   S        +   LL              Y    G   + +      
Sbjct: 8   KLAVLIDADNAQPS--------NAATLLAEIAKYGTAHVKRAYGDWTGTSLKGWKEHL-- 57

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124
                     +  +  ++F    G    K++ D  + +DA +   S   E   I S D  
Sbjct: 58  --------LALSIQPIQQFAYTSG----KNATDAAMVIDAMDLLYSGRFEGFCIVSSDSD 105

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
           FT L A ++     V       +     +       D F+    L 
Sbjct: 106 FTRLAARIRESGLIVYGFGERKTPKPFVA-----ACDKFVYTENLA 146


>gi|189500992|ref|YP_001960462.1| hypothetical protein Cphamn1_2071 [Chlorobium phaeobacteroides BS1]
 gi|189496433|gb|ACE04981.1| conserved hypothetical protein [Chlorobium phaeobacteroides BS1]
          Length = 247

 Score =  107 bits (268), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 51/172 (29%), Gaps = 29/172 (16%)

Query: 3   DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
           +  E++ + ID  N  AS            LL       I      Y        + +  
Sbjct: 4   EKTERLTVLIDADNTQASI--------IDGLLAEVAKYGIASVKRIYGDWTSQALKGWK- 54

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
                        +V+ + + +  +  G  R K++ D  + +DA +   +   +   I S
Sbjct: 55  -------------EVLLEHSIQPIQQFGYTRGKNATDSAMIIDAMDLLYTGNFDGFCIVS 101

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
            D  FT L + ++     V                     D F+    L+  
Sbjct: 102 SDSDFTKLASRIRESGLFVYGFGEKK-----TPSAFVSACDKFIYTEVLRAR 148


>gi|325924315|ref|ZP_08185859.1| hypothetical protein XGA_4921 [Xanthomonas gardneri ATCC 19865]
 gi|325545180|gb|EGD16490.1| hypothetical protein XGA_4921 [Xanthomonas gardneri ATCC 19865]
          Length = 276

 Score =  107 bits (267), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 51/172 (29%), Gaps = 29/172 (16%)

Query: 3   DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
           +P ++IAL ID  N  A             +L       +      Y        + +  
Sbjct: 6   NPDKRIALLIDADNAPAG--------KIDVVLAEVARYGVANVRRAYGNWKSPHLKNW-- 55

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
                            +  ++F  + G    K++ D+ + +DA +   +  L+   I S
Sbjct: 56  --------EAALHDYAIRPIQQFAYSSG----KNASDMAMVIDAMDLLYARNLDGFAIVS 103

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
            D  FT LV  L     KV       +               F  +  L  +
Sbjct: 104 SDADFTPLVMRLLTDGMKVYGFGEKKTPAP-----FVNACSKFTYVEALGEQ 150


>gi|149917268|ref|ZP_01905767.1| hypothetical protein PPSIR1_40335 [Plesiocystis pacifica SIR-1]
 gi|149821875|gb|EDM81269.1| hypothetical protein PPSIR1_40335 [Plesiocystis pacifica SIR-1]
          Length = 474

 Score =  107 bits (267), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 42/174 (24%), Positives = 65/174 (37%), Gaps = 24/174 (13%)

Query: 5   REKIALFIDGANLYASS-------KALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
            ++IA+FID  NL                 +D  +L++  R    +I A  Y        
Sbjct: 4   NDRIAMFIDFENLVYGLENTEQHEGRADIALDVERLVRFARDEGRLIVARAYADWRSASV 63

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEH 115
           +Q      +       G + +  + +          VK+S+DV LAVDA E       + 
Sbjct: 64  RQHQRDLYVQ------GIEPINVLGRRHG-----SEVKNSVDVALAVDAVESLFERDYDT 112

Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
            V+ SGD  F  L+  ++   K+V  VS        AS  L    D F+    L
Sbjct: 113 FVLISGDRDFLPLLRCIRSHGKRVVGVS----VRESASRDLPNLCDRFVFYRDL 162


>gi|108802863|ref|YP_642800.1| hypothetical protein Rxyl_0007 [Rubrobacter xylanophilus DSM 9941]
 gi|108764106|gb|ABG02988.1| protein of unknown function DUF88 [Rubrobacter xylanophilus DSM
           9941]
          Length = 487

 Score =  107 bits (267), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 42/166 (25%), Positives = 68/166 (40%), Gaps = 14/166 (8%)

Query: 8   IALFIDGANLYASS-KALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           +A+FID  N+Y S+    G   +   +L+  R    ++ A  Y        +   P    
Sbjct: 104 LAIFIDWENIYISTVSEYGAKPNVSAILEKAREYGRIVSATAYADWTDGEFRDAPPTLY- 162

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG---LEHLVIFSGDG 123
                 NG       A+ F     +KR  +S+DV LAV+  +       ++  V+ +GDG
Sbjct: 163 -----SNGISPRYISARYFPGGKSQKRRTNSIDVMLAVECVDFLHNHPQVDTYVLVTGDG 217

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
            F  LV  L+ + K V ++          S  L   AD+F+  A L
Sbjct: 218 DFIPLVNLLRSRGKVVVVI----GVSEATSYHLIESADHFISYASL 259


>gi|194291074|ref|YP_002006981.1| hypothetical protein RALTA_A2999 [Cupriavidus taiwanensis LMG
           19424]
 gi|193224909|emb|CAQ70920.1| conserved hypothetical protein [Cupriavidus taiwanensis LMG 19424]
          Length = 426

 Score =  107 bits (267), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 24/168 (14%), Positives = 47/168 (27%), Gaps = 29/168 (17%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           +A+ ID  N   +            LL       +      Y          +       
Sbjct: 12  LAVLIDADNAAPAI--------VEGLLAEVAKYGVAAVKRIYGDWTRPNLAGWK------ 57

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCF 125
                       +  ++F    G    K++ D  + +DA +   +   +   I S D  F
Sbjct: 58  ----ERLLSHSIQPIQQFRYTVG----KNATDSAMIIDAMDLLYTGRFDGFCIVSSDSDF 109

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
           T L + ++ +   V       +             D F+    L+ E+
Sbjct: 110 TRLASRIREQGLTVYGFGERKTPKP-----FVTACDKFIYSDVLRAEV 152


>gi|73542916|ref|YP_297436.1| hypothetical protein Reut_A3232 [Ralstonia eutropha JMP134]
 gi|72120329|gb|AAZ62592.1| conserved hypothetical protein [Ralstonia eutropha JMP134]
          Length = 419

 Score =  107 bits (266), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 24/176 (13%), Positives = 48/176 (27%), Gaps = 29/176 (16%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           +A+ ID  N   +            LL       +      Y          +       
Sbjct: 12  LAVLIDADNAAPAI--------IEGLLAEVAKYGVAAVKRIYGDWTKPNLSGWK------ 57

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCF 125
                       +  ++F    G    K++ D  + +DA +   +E  +   + S D  F
Sbjct: 58  ----ECLLSHSIQPIQQFRYTVG----KNATDSAMIIDAMDLLYTERFDGFCLVSSDSDF 109

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
           T L + ++ +   V       +             D F+    L+ +   D     
Sbjct: 110 TRLASRIREQGLIVYGFGERKTPKP-----FVTACDKFIYSDVLRADAEVDEAATP 160


>gi|254424011|ref|ZP_05037729.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
 gi|196191500|gb|EDX86464.1| conserved hypothetical protein [Synechococcus sp. PCC 7335]
          Length = 157

 Score =  107 bits (266), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 42/163 (25%), Positives = 80/163 (49%), Gaps = 13/163 (7%)

Query: 17  LYASSKALGFDIDYRKLLKAFRSRAI---VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYN 73
           ++ + +  G+  D +++L+ F        +  A++YT +               D L   
Sbjct: 1   MFYAQQKNGWFFDPKRVLEYFLKEIEGNVLGNAFWYTGLKDP-----QDQRAFRDALISL 55

Query: 74  GFQVVAKVAKEFTEN-CGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAAL 132
           G+ V  K+ KE+ ++  GR   K+++D+E+ VD F   +  + +V+FSGDG F   +  L
Sbjct: 56  GYTVRTKILKEYYDDASGRYSQKANLDIEIVVDMFNTVDQYDRVVLFSGDGDFERAIELL 115

Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
           + K   +T+VST      M + +LR   D ++DL  ++  I +
Sbjct: 116 RSKSTHITVVST----EGMIARELRNVTDRYIDLNSIRRRIEK 154


>gi|23009928|ref|ZP_00050797.1| COG1432: Uncharacterized conserved protein [Magnetospirillum
           magnetotacticum MS-1]
          Length = 110

 Score =  107 bits (266), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 48/95 (50%), Positives = 74/95 (77%)

Query: 78  VAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVK 137
           + K  KEFT++ GR+++K +MD+ELA+DA E +  ++H+V+FSGDG F +LV A+QR+  
Sbjct: 1   MTKPVKEFTDSAGRRKIKGNMDIELAIDALELAPYIDHMVLFSGDGDFRSLVEAIQRRGV 60

Query: 138 KVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
           +V++VST+ + P+M +D LRRQAD F+DLA+L N 
Sbjct: 61  RVSVVSTIQTQPAMIADDLRRQADEFVDLAHLANR 95


>gi|254432426|ref|ZP_05046129.1| protein containing DUF88 [Cyanobium sp. PCC 7001]
 gi|197626879|gb|EDY39438.1| protein containing DUF88 [Cyanobium sp. PCC 7001]
          Length = 244

 Score =  107 bits (266), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 48/172 (27%), Gaps = 29/172 (16%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M      +A+ ID  N  A+           +LL              Y          +
Sbjct: 1   MSREAPNLAVLIDSDNAQATV--------ISELLAEVSQVGTATVKRAYGDWTTPQLSSW 52

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVI 118
             +  +             +  ++F+   G    K++ D  L +DA +      +E   +
Sbjct: 53  KEVLNVHA----------IQPVQQFSYTSG----KNATDSALIIDAMDLLHGGRVEGFCL 98

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
            S D  FT L   ++ +   V                     D F+    LK
Sbjct: 99  VSSDSDFTRLATRIREEGLLVIGFGERK-----TPKAFVAACDRFLYTDILK 145


>gi|153815213|ref|ZP_01967881.1| hypothetical protein RUMTOR_01447 [Ruminococcus torques ATCC 27756]
 gi|317502327|ref|ZP_07960496.1| hypothetical protein HMPREF1026_02440 [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|331089931|ref|ZP_08338823.1| hypothetical protein HMPREF1025_02406 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|145847472|gb|EDK24390.1| hypothetical protein RUMTOR_01447 [Ruminococcus torques ATCC 27756]
 gi|316896283|gb|EFV18385.1| hypothetical protein HMPREF1026_02440 [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|330403163|gb|EGG82724.1| hypothetical protein HMPREF1025_02406 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 323

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 57/170 (33%), Gaps = 29/170 (17%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
            E+ AL ID  N+  S+K        + +L        V     Y          +    
Sbjct: 2   EERFALLIDADNV--SAKY------IKPILDELSKYGNVTYKRIYGDWTRPNSAGWK--- 50

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122
                      Q      ++F+   G    K++ D  + +DA +   +  LE   + S D
Sbjct: 51  -------EELLQNSITPIQQFSYTYG----KNATDSAMIIDAMDMLYASELEGFCLVSSD 99

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
             FT L + L+   K+V  +    +         R+  + F +L  L  +
Sbjct: 100 SDFTRLASRLRESGKRVIGMGEAKTPLP-----FRKACEIFTELELLLED 144


>gi|313680485|ref|YP_004058224.1| hypothetical protein Ocepr_1598 [Oceanithermus profundus DSM 14977]
 gi|313153200|gb|ADR37051.1| protein of unknown function DUF88 [Oceanithermus profundus DSM
           14977]
          Length = 189

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 38/172 (22%), Positives = 80/172 (46%), Gaps = 16/172 (9%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
            +++ALFIDG+ +Y  +K +G+++D+RK+++ F S   +  A+YY  +    +++     
Sbjct: 1   MDRLALFIDGSFVYNCAKRMGWNVDHRKVIEHFPSGFALFNAFYYAPITDWNDERQQK-- 58

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
             LD L + G+ V ++  +             S +  +A D    +   +  ++ SG   
Sbjct: 59  -FLDALIFMGYSVRSREVR---------GEAPSFEAHIATDLLITAPRWDVALLASGAAQ 108

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
               V A++   K+V ++      P +    +R   D F+DL   +  + R+
Sbjct: 109 LVPAVEAVRTMGKEVHLLGI----PELVDLDIRSATDRFIDLKEYRELLERE 156


>gi|313159666|gb|EFR59024.1| conserved hypothetical protein [Alistipes sp. HGB5]
          Length = 320

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 23/171 (13%), Positives = 48/171 (28%), Gaps = 29/171 (16%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M    +K A+ ID  N+             + +L    +         Y           
Sbjct: 1   MELSDKKFAVLIDADNISHR--------KIKDILDEIANYGTPTIKRIYGDFTDPK---- 48

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVI 118
                          +      +++    G    K++ D  L +DA +      +    I
Sbjct: 49  ------FAAWKSILLENSITPIQQYAYTTG----KNATDSALIIDAMDILHKESVNGFCI 98

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
            S D  +T L + ++   ++V       +          +  D F+ +  L
Sbjct: 99  VSSDSDYTRLASRIRESGREVLGFGEKKTPKP-----FIKSCDKFIYVEIL 144


>gi|320160886|ref|YP_004174110.1| hypothetical protein ANT_14820 [Anaerolinea thermophila UNI-1]
 gi|319994739|dbj|BAJ63510.1| hypothetical protein ANT_14820 [Anaerolinea thermophila UNI-1]
          Length = 302

 Score =  106 bits (265), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 49/161 (30%), Positives = 80/161 (49%), Gaps = 13/161 (8%)

Query: 9   ALFIDGANLYASSKALGFDIDYRKLLKAF-RSRAIVIRAYYYTTV----VGDPEQQFSPL 63
            +F+D AN+Y +    G  + Y  L +   R  A  IR   Y T       D E+     
Sbjct: 34  GVFVDVANIYLNG---GQRMQYDVLREFACRDHAEAIRLNAYVTYDVERAEDDEEYRKGA 90

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
                 L   G++V+ K    +T+  G +  K++ D+++AVDA  QS+ L+ ++I SGDG
Sbjct: 91  QNFHGALRDLGYKVIVKDIHWYTDVNGIRVAKANADLDMAVDALTQSDYLDRVLIASGDG 150

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
            F  +V ALQ K  +V +V          S++L+ +AD+F+
Sbjct: 151 DFVQVVRALQNKGCRVEVVGLD-----NVSNRLKAEADFFI 186


>gi|322696485|gb|EFY88277.1| hypothetical protein MAC_05750 [Metarhizium acridum CQMa 102]
          Length = 251

 Score =  106 bits (264), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 51/174 (29%), Gaps = 29/174 (16%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           K+A+ ID  N   +   +        LL              Y    G   + +      
Sbjct: 8   KLAVLIDADNAQPNMAGV--------LLAEIAKYGTAFVKRAYGDWTGTNLKGWK----- 54

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124
                    +      ++F    G    K+S D  + +DA +   S   +   + S D  
Sbjct: 55  -----EQLLENSILPIQQFAYTQG----KNSTDAAMVIDAMDLLYSNRFDGFCLVSSDSD 105

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
           FT L + ++     V       +        L    D F+ +  L   +   PD
Sbjct: 106 FTRLASRIRESGLLVYGFGERKAPK-----ALVSACDKFIYIENLSQNVDFAPD 154


>gi|21244544|ref|NP_644126.1| hypothetical protein XAC3820 [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21110218|gb|AAM38662.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 268

 Score =  106 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 51/175 (29%), Gaps = 30/175 (17%)

Query: 1   MFDP-REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
           M D   ++IAL ID  N  A             +L       +      Y        + 
Sbjct: 3   MSDNADKRIALLIDADNAPAG--------KIDVVLAEVARYGVANVRRAYGNWKSPHLKG 54

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLV 117
           +                   +  ++F  + G    K++ D+ + +DA +   +  L+   
Sbjct: 55  W----------EAALHDYAIRPIQQFAYSSG----KNASDMAMVIDAMDLLYARNLDGFA 100

Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
           I S D  FT LV  L     KV       +               F  +  L  +
Sbjct: 101 IVSSDADFTPLVMRLLTDGMKVYGFGEKKTPAP-----FVNACSKFTYVEALGEQ 150


>gi|154506256|ref|ZP_02042994.1| hypothetical protein RUMGNA_03798 [Ruminococcus gnavus ATCC 29149]
 gi|153793444|gb|EDN75864.1| hypothetical protein RUMGNA_03798 [Ruminococcus gnavus ATCC 29149]
          Length = 320

 Score =  106 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 58/179 (32%), Gaps = 31/179 (17%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
            E+ AL ID  N+  S+K        + +L        V     Y          +    
Sbjct: 2   EERYALLIDADNV--SAKY------IKPILDELSKYGNVTYKRIYGDWTSTYNSSWK--- 50

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122
                      Q      ++F+   G    K++ D  + +DA +   +  LE   + S D
Sbjct: 51  -------EVLLQNSITPIQQFSYTHG----KNATDSAMIIDAMDMLYTSELEGFCLVSSD 99

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE--IARDPDE 179
             FT L + L+   K V  +    + P       R+  D F  L  L  +  + +    
Sbjct: 100 SDFTKLASRLRESGKMVIGMGEDKTPPP-----FRKACDIFTVLELLLEDSMLEKPEKA 153


>gi|315925521|ref|ZP_07921731.1| protein of hypothetical function DUF88 [Pseudoramibacter
           alactolyticus ATCC 23263]
 gi|315621062|gb|EFV01033.1| protein of hypothetical function DUF88 [Pseudoramibacter
           alactolyticus ATCC 23263]
          Length = 320

 Score =  106 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 31/176 (17%), Positives = 56/176 (31%), Gaps = 29/176 (16%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           + A+ IDG N+  S++          +L    S  +      Y         ++      
Sbjct: 5   RFAILIDGDNI--SARY------IAGILDEMTSYGVATYKRIYGDWTSTGANKWKEQLLS 56

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDGC 124
                           ++F    G    K++ D  L +DA +      ++   I S D  
Sbjct: 57  KS----------ITPIQQFANVSG----KNATDSALIIDAMDILYGGMVDGFCIVSSDSD 102

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           FT L + L+     V  +           D  R     F+ L  + +   +D D+D
Sbjct: 103 FTRLASRLRESGMMVIGMGEDK-----TPDSFRNACTKFISLENILDSYEQDIDQD 153


>gi|294494973|ref|YP_003541466.1| hypothetical protein Mmah_0289 [Methanohalophilus mahii DSM 5219]
 gi|292665972|gb|ADE35821.1| protein of unknown function DUF88 [Methanohalophilus mahii DSM
           5219]
          Length = 258

 Score =  106 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 55/170 (32%), Gaps = 29/170 (17%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
           ++K+A+ ID  N   S            L        I      Y        + +    
Sbjct: 7   QKKLAVLIDADNAQPSI--------VEGLFSEIAKYGIASVKRIYGDWTRPNLKNWKDSL 58

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122
                      +   +  ++F+   G    K++ D  L +DA +   SE L+   I S D
Sbjct: 59  ----------LEHSIQPMQQFSYTYG----KNATDSSLIIDAMDLLYSEPLDGFCIVSSD 104

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
             FT L + ++   +KV     + +             D F+    L+ E
Sbjct: 105 SDFTRLSSRIRESGRKVYGFGELKTPKP-----FIAACDKFIYTENLRKE 149


>gi|153954651|ref|YP_001395416.1| hypothetical protein CKL_2033 [Clostridium kluyveri DSM 555]
 gi|219855122|ref|YP_002472244.1| hypothetical protein CKR_1779 [Clostridium kluyveri NBRC 12016]
 gi|146347509|gb|EDK34045.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
 gi|219568846|dbj|BAH06830.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 250

 Score =  106 bits (264), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 55/179 (30%), Gaps = 29/179 (16%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            D  +KIA+ ID  N+  S K + +  D         +         Y          + 
Sbjct: 1   MDKDKKIAVLIDADNV--SEKYIKYIFD------EISNHGTPTYKRIYGDWTKPQLASWK 52

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIF 119
                                +++    G    K+S D  L +DA +   S  ++   I 
Sbjct: 53  ----------NVLLNYSISPIQQYGYTTG----KNSTDAALIIDAMDILYSNNVDGFCIV 98

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
           S D  FT L A L+     V  +    +     S       + F  L  L +  ++  +
Sbjct: 99  SSDSDFTKLAARLREAGMFVIGMGEKKTPTPFIS-----ACEKFKYLEVLASMASKPAE 152


>gi|52842281|ref|YP_096080.1| hypothetical protein lpg2067 [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|52629392|gb|AAU28133.1| hypothetical protein lpg2067 [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 260

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 50/167 (29%), Gaps = 29/167 (17%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           K+A+ ID  N           +    LL         I    Y         Q+  +   
Sbjct: 12  KLAVLIDADN--------ARAVIIDGLLTEIAGYGDAIVRRIYGDFTLPSSAQWKKVLH- 62

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124
                    +   K  ++F    G    K++ D  L +DA +   +       I S D  
Sbjct: 63  ---------KYAIKPVQQFAFTSG----KNATDSALIIDAMDLLYTHRFGGFCIVSSDSD 109

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
           FT+L   ++ +  +V              +  R   + F+    L+ 
Sbjct: 110 FTSLANRIREEGLQVFGFGEKK-----TPEAFRNACNKFIFTEVLRP 151


>gi|52220908|ref|YP_086777.1| hypothetical protein pAgK84_22 [Agrobacterium tumefaciens]
 gi|222112727|ref|YP_002559314.1| hypothetical protein Arad_15022 [Agrobacterium radiobacter K84]
 gi|41393790|gb|AAS02138.1| hypothetical protein [Agrobacterium tumefaciens]
 gi|221728504|gb|ACM31476.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
          Length = 275

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 47/176 (26%), Gaps = 29/176 (16%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           +AL IDG N+               LL    +  I      Y          +       
Sbjct: 9   LALLIDGDNVSPKI--------VTGLLAEIANYGIASVKRIYGDWTKPNLNGWK------ 54

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCF 125
                   +   +  ++F    G    K++ D  + +DA +   +       I S D  F
Sbjct: 55  ----ECLLEHSIQPVQQFAYTTG----KNATDGAMIIDAMDLLYTGRFSGFCIVSSDSDF 106

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
             L A ++ +   V       +             D F+    L   +      + 
Sbjct: 107 ARLAARIREQGVTVYGFGERKTPRP-----FITACDKFVYFDVLNASVEEPATAEP 157


>gi|255020942|ref|ZP_05292998.1| hypothetical protein ACA_1164 [Acidithiobacillus caldus ATCC 51756]
 gi|254969733|gb|EET27239.1| hypothetical protein ACA_1164 [Acidithiobacillus caldus ATCC 51756]
          Length = 336

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 39/166 (23%), Positives = 79/166 (47%), Gaps = 14/166 (8%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSR--AIVIRAYYYTTVVGDPEQQFS 61
            R+ I +++D  N+  +    G+ + Y  L +       A ++R   Y  +  +  ++  
Sbjct: 5   SRQGIGVYVDAENIRYNG---GYAMRYDVLRRFAGRGDDARLLRLNTYMAIDEERLRRDP 61

Query: 62  PLHP----LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLV 117
                       +   G++++ K  + FT+  G +  K++ D++LAVD   QSE L+ ++
Sbjct: 62  DYRDGIRGYQQAVRDLGWKIIEKPVRWFTDEEGNRLSKANADLDLAVDVMLQSERLDQVL 121

Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163
           + +GDG F  +V ALQ +  +V +++         S  L+ +AD F
Sbjct: 122 LVTGDGDFLQVVRALQNRGCRVEVLAF-----RNVSRDLQHEADAF 162


>gi|58583915|ref|YP_202931.1| hypothetical protein XOO4292 [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|58428509|gb|AAW77546.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 274

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 50/169 (29%), Gaps = 29/169 (17%)

Query: 3   DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
           +P ++IAL ID  N  A             +L       +      Y        + +  
Sbjct: 4   NPDKRIALLIDADNAPAG--------KIDVVLAEVARYGVANVRRAYGNWKSPQLKGW-- 53

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
                            +  ++F  + G    K++ D+ + +DA +   +  L+   I S
Sbjct: 54  --------EAALHDDAIRPIQQFAYSSG----KNASDMAMVIDAMDLLYARNLDGFAIVS 101

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
            D  FT LV  L     KV       +               F  +  L
Sbjct: 102 SDADFTPLVMRLLTDGMKVYGFGEKKTPAP-----FVNACSKFTYVEAL 145


>gi|78186223|ref|YP_374266.1| hypothetical protein Plut_0335 [Chlorobium luteolum DSM 273]
 gi|78166125|gb|ABB23223.1| conserved hypothetical protein [Chlorobium luteolum DSM 273]
          Length = 247

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 54/185 (29%), Gaps = 31/185 (16%)

Query: 1   MFDPR-EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
           M + R +++A+ ID  N   S            LL              Y        + 
Sbjct: 1   MAEDRSDRLAVLIDADNTQPSI--------IEGLLAEIAKFGTSNVKRIYGDWTSTALKG 52

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLV 117
           +               +   +  ++F    G    K+S D  + +DA +   +       
Sbjct: 53  WK----------EVLLEYSIQPIQQFGYTKG----KNSTDSAMIIDAMDLLYTGRFNGFC 98

Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI-ARD 176
           I S D  FT L   ++     V       +     S       D F+    L+ +    +
Sbjct: 99  IVSSDSDFTKLAVRIREAGLTVYGFGEQKTPGPFVS-----ACDKFIYTEVLRAKTNENE 153

Query: 177 PDEDK 181
           P + +
Sbjct: 154 PIKRR 158


>gi|302890921|ref|XP_003044343.1| hypothetical protein NECHADRAFT_62469 [Nectria haematococca mpVI
           77-13-4]
 gi|256725266|gb|EEU38630.1| hypothetical protein NECHADRAFT_62469 [Nectria haematococca mpVI
           77-13-4]
          Length = 262

 Score =  105 bits (263), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 53/165 (32%), Gaps = 29/165 (17%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           K+A+ ID  N+  + +  G      ++L       I      Y    G     +      
Sbjct: 8   KLAVLIDSDNV--TPRVAG------QVLAEVAKYGIAFVKRAYGDWTGPGLNSWKDHLLD 59

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124
                        +  ++F+   G    K+S D  + +DA +   S   +   + S D  
Sbjct: 60  NS----------IQPIQQFSYTKG----KNSTDSAMIIDAMDLLYSNKFDGFCLVSSDSD 105

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
           FT L + ++     V              + L R  D F+ +  L
Sbjct: 106 FTRLASRIRESGLVVYGFGERK-----TPNSLVRACDKFIYIENL 145


>gi|299532727|ref|ZP_07046115.1| hypothetical protein CTS44_18078 [Comamonas testosteroni S44]
 gi|298719362|gb|EFI60331.1| hypothetical protein CTS44_18078 [Comamonas testosteroni S44]
          Length = 293

 Score =  105 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 54/174 (31%), Gaps = 30/174 (17%)

Query: 1   MFDP-REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
           M +  + +IAL ID  N  A            ++L    +  ++     Y          
Sbjct: 1   MPNDVQPRIALLIDADNAPAEM--------IDEILTELSTFGLINIRRAYGNWTKAGLHG 52

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLV 117
           +               +   +  ++F  + G    K++ D+ + VDA E   +E  +   
Sbjct: 53  WQSKL----------LEYAVRPMQQFDYSKG----KNATDMAMTVDAMELLYTEKPDAFG 98

Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
           I S D  FT LV  L+ K   V                       F+    LK 
Sbjct: 99  IVSSDADFTPLVMHLRAKGAAVYGFG-----AEQTPRAFVNACSRFLYFDALKE 147


>gi|88799413|ref|ZP_01114991.1| hypothetical protein MED297_17443 [Reinekea sp. MED297]
 gi|88777952|gb|EAR09149.1| hypothetical protein MED297_17443 [Reinekea sp. MED297]
          Length = 252

 Score =  105 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 55/183 (30%), Gaps = 30/183 (16%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M D   +IAL ID  N+   +           +L        V   + +        + +
Sbjct: 1   MADKM-RIALLIDCDNVSHRA--------VEGVLAVLARYGQVNVRHAFGDWNSPHIKGW 51

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118
           +                  +  ++F       R K++ D  + +DA +   S  ++   +
Sbjct: 52  AEKLQPNA----------IRPMQQFAY----TRQKNATDSAMIIDAMDLLYSGNVDAFAL 97

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
            + D  FT LV  L+     V                       F+ +  L      D D
Sbjct: 98  MTSDCDFTPLVMRLREAGLMVFGFGEEK-----TPAAFVDSCSQFVYIEKLTEASEVDDD 152

Query: 179 EDK 181
           ++K
Sbjct: 153 DEK 155


>gi|150389764|ref|YP_001319813.1| hypothetical protein Amet_1991 [Alkaliphilus metalliredigens QYMF]
 gi|149949626|gb|ABR48154.1| conserved hypothetical protein [Alkaliphilus metalliredigens QYMF]
          Length = 250

 Score =  105 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 51/171 (29%), Gaps = 29/171 (16%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            +  +KIA+ ID  N+  S K + F  D         +         Y          + 
Sbjct: 1   MENDKKIAVLIDADNV--SGKYIKFIFD------EISNHGTPTFKRIYGDWTNPQLSSWK 52

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIF 119
                                ++++   G    K++ D  L +DA +   S  ++   I 
Sbjct: 53  S----------VLLNYSITPIQQYSYTTG----KNATDAALIIDAMDILYSNNVDGFCIV 98

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
           S D  FT L A L+     V  +    +             + F  L  L 
Sbjct: 99  SSDSDFTRLAARLREAGMYVIGMGEKKTPAP-----FIAACEKFKYLEVLA 144


>gi|305665003|ref|YP_003861290.1| hypothetical protein FB2170_01831 [Maribacter sp. HTCC2170]
 gi|88707415|gb|EAQ99660.1| hypothetical protein FB2170_01831 [Maribacter sp. HTCC2170]
          Length = 255

 Score =  105 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 54/170 (31%), Gaps = 29/170 (17%)

Query: 9   ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68
           A+ IDG N+ ++        + +++++             Y         ++        
Sbjct: 7   AVLIDGDNIPSA--------NVKEMMEEIAKYGNPTIKRIYGDWTNPRLNKWKA------ 52

Query: 69  WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDGCFT 126
                  +      +++    G    K++ D  + +DA +   S  +    + S D  FT
Sbjct: 53  ----VLLENAITPIQQYGYTSG----KNATDSAMIIDAMDILYSGKVNGFCLVSSDSDFT 104

Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
            L   L+    +V  +           D      D F+ +  LKN+    
Sbjct: 105 RLATRLREAGMQVFGIGEKK-----TPDPFIVACDKFIYIEILKNQSEET 149


>gi|294626535|ref|ZP_06705134.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|294665102|ref|ZP_06730406.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292599225|gb|EFF43363.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292605144|gb|EFF48491.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 270

 Score =  105 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 50/169 (29%), Gaps = 29/169 (17%)

Query: 3   DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
           +P ++IAL ID  N  A             +L       +      Y        + +  
Sbjct: 6   NPDKRIALLIDADNAPAG--------KIDVVLAEVARYGVANVRRAYGNWKSPHLKGW-- 55

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
                            +  ++F  + G    K++ D+ + +DA +   +  L+   I S
Sbjct: 56  --------EAALHDYAIRPIQQFAYSSG----KNASDMAMVIDAMDLLYARNLDGFAIVS 103

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
            D  FT LV  L     KV       +               F  +  L
Sbjct: 104 SDADFTPLVMRLLTDGMKVYGFGEKKTPAP-----FVNACSKFTYVEAL 147


>gi|325855713|ref|ZP_08171904.1| hypothetical protein HMPREF9303_0369 [Prevotella denticola CRIS
           18C-A]
 gi|325483766|gb|EGC86728.1| hypothetical protein HMPREF9303_0369 [Prevotella denticola CRIS
           18C-A]
          Length = 260

 Score =  105 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 61/189 (32%), Gaps = 34/189 (17%)

Query: 1   MFDPRE-KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
           M +  E K+A+ ID  N+  S          +++L    +  +      Y          
Sbjct: 1   MKEKEEMKLAVLIDADNVPCS--------KVKEMLNEITNYGVPTIKRIYGDWTKRTVSG 52

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLV 117
           +               +      ++++   G    K++ D  + +DA +       +   
Sbjct: 53  WKA----------VLLENAITPIQQYSYTTG----KNATDSAMIIDAMDILHGGDCDGFC 98

Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL----KNEI 173
           I S D  FT L   L+   K V  +    +             D F+ +  L     NEI
Sbjct: 99  IVSSDSDFTRLATRLRESGKYVIGIGEQKTPQP-----FIVSCDKFIYIEILETINANEI 153

Query: 174 ARDPDEDKK 182
            ++ +  K+
Sbjct: 154 KKEDNTAKR 162


>gi|327540413|gb|EGF26998.1| protein containing DUF88 [Rhodopirellula baltica WH47]
          Length = 242

 Score =  105 bits (262), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 55/182 (30%), Gaps = 31/182 (17%)

Query: 3   DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
            P   IAL ID  N  +S            ++    +  +V     Y        + +  
Sbjct: 5   HPEGSIALLIDADNAPSS--------KIEFIISELATYGVVNIRKAYGNWTKRGLEGW-- 54

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFS 120
                        +      + F    G    K++ D+ L +DA +   +  +    + S
Sbjct: 55  --------INVLHEYAIAPTQCFDLIKG----KNATDMALLIDAMDILYTRQVNTFGLVS 102

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
            D  FT LV  L+   K+V       S              +F+ L        + P + 
Sbjct: 103 SDCDFTPLVCRLREDGKQVIGFGRQNSPAP-----FVLACSHFIYLDE--EPTEKTPPKK 155

Query: 181 KK 182
           ++
Sbjct: 156 RR 157


>gi|289450778|ref|YP_003475518.1| hypothetical protein HMPREF0868_1242 [Clostridiales genomosp. BVAB3
           str. UPII9-5]
 gi|289185325|gb|ADC91750.1| conserved hypothetical protein [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
          Length = 257

 Score =  105 bits (261), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 52/172 (30%), Gaps = 30/172 (17%)

Query: 1   MFDPRE-KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
           M +  + ++A+ ID  N+ +           + L++      I      Y          
Sbjct: 1   MNNDDDIRLAVLIDADNISSHY--------VKALMEEVARYGIPTIKRIYGDWTRPNLSN 52

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLV 117
           +                      ++F    G    K+S D  L +DA +   +E ++   
Sbjct: 53  WK----------NCLLDHAIAPIQQFGYTSG----KNSTDSALIIDAMDILYAEKVDGFC 98

Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
           + S D  FT L   L+   K V       +             D F+ L  +
Sbjct: 99  LVSSDSDFTRLATRLREAGKVVYGFGEQKTPNP-----FIAACDRFVFLEII 145


>gi|255935257|ref|XP_002558655.1| Pc13g02120 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211583275|emb|CAP91281.1| Pc13g02120 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 259

 Score =  105 bits (261), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 47/166 (28%), Gaps = 29/166 (17%)

Query: 6   EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
            K+A+ ID  N   S   L        LL              +        Q +     
Sbjct: 7   PKLAVLIDADNARPSVVNL--------LLSEIAKYGTAHAKRAHGDWTRSSLQGWK---- 54

Query: 66  LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDG 123
                     +   +  ++F    G    K++ D  + +DA +   S   +   + S D 
Sbjct: 55  ------DVLLEQSIQPIQQFAYTHG----KNATDSAMIIDAMDLLYSNRYDGFCLVSSDS 104

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
            FT L A ++     V       +     +       D F+    L
Sbjct: 105 DFTRLAARIRESGLIVYGFGEQKTPKPFVA-----ACDKFIYTENL 145


>gi|313200777|ref|YP_004039435.1| hypothetical protein MPQ_1031 [Methylovorus sp. MP688]
 gi|312440093|gb|ADQ84199.1| conserved hypothetical protein [Methylovorus sp. MP688]
          Length = 280

 Score =  105 bits (261), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 27/169 (15%), Positives = 51/169 (30%), Gaps = 29/169 (17%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDY-RKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
              ++A+ ID  N +         ID   +L +             Y     +   ++  
Sbjct: 11  NNPRLAVLIDADNTF-------KVIDIIDELFEEISKFGDASVRRIYGDWTQNQLNRWK- 62

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
                        +   +  +++    G    K+S D  L +DA +   +  L+   I S
Sbjct: 63  ---------EILPKHAIQPIQQYANTKG----KNSTDSALIIDAMDLLYTAPLDGFCIVS 109

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
            D  FT L    +   K V              + L    + F+ +  L
Sbjct: 110 SDSDFTRLAIRFRESGKMVYGFGEQK-----TPESLMAACNQFIYIEIL 153


>gi|253998702|ref|YP_003050765.1| hypothetical protein Msip34_0991 [Methylovorus sp. SIP3-4]
 gi|253985381|gb|ACT50238.1| protein of unknown function DUF88 [Methylovorus sp. SIP3-4]
          Length = 275

 Score =  104 bits (260), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 27/169 (15%), Positives = 51/169 (30%), Gaps = 29/169 (17%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDY-RKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
              ++A+ ID  N +         ID   +L +             Y     +   ++  
Sbjct: 6   NNPRLAVLIDADNTF-------KVIDIIDELFEEISKFGDASVRRIYGDWTQNQLNRWK- 57

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
                        +   +  +++    G    K+S D  L +DA +   +  L+   I S
Sbjct: 58  ---------EILPKHAIQPIQQYANTKG----KNSTDSALIIDAMDLLYTAPLDGFCIVS 104

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
            D  FT L    +   K V              + L    + F+ +  L
Sbjct: 105 SDSDFTRLAIRFRESGKMVYGFGEQK-----TPESLMAACNQFIYIEIL 148


>gi|302385690|ref|YP_003821512.1| hypothetical protein Closa_1286 [Clostridium saccharolyticum WM1]
 gi|302196318|gb|ADL03889.1| conserved hypothetical protein [Clostridium saccharolyticum WM1]
          Length = 308

 Score =  104 bits (260), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 57/171 (33%), Gaps = 29/171 (16%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
             +K A+ ID  N+  S+K          +L       ++     Y         ++   
Sbjct: 3   SDKKFAVLIDSDNI--SAKY------ITCILDEMTRYGVITYKRIYGDWTSSQMGKWKM- 53

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSG 121
                       +      ++F+   G    K++ D  L +DA +   ++ ++   I S 
Sbjct: 54  ---------ELLENSITPIQQFSNTVG----KNATDSALIIDAMDLLYTDHVDGFCIVSS 100

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
           D  FT L + L+   K+V  +              R     F +L  L ++
Sbjct: 101 DSDFTRLASRLRESGKEVIGMGEDK-----TPKSFRAACTVFTNLEVLLDQ 146


>gi|94312326|ref|YP_585536.1| hypothetical protein Rmet_3395 [Cupriavidus metallidurans CH34]
 gi|93356178|gb|ABF10267.1| conserved hypothetical protein [Cupriavidus metallidurans CH34]
          Length = 432

 Score =  104 bits (260), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 46/167 (27%), Gaps = 29/167 (17%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           +A+ ID  N   +            LL       +      Y          +       
Sbjct: 11  LAVLIDADNAAPAI--------VEGLLAEVAKYGVAAVKRIYGDWTRPNLSGWK------ 56

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCF 125
                       +  ++F    G    K++ D  + +DA +   +   +   I S D  F
Sbjct: 57  ----DRLLAHSIQPIQQFRYTVG----KNATDSAMIIDAMDLLYTGRFDGFCIVSSDSDF 108

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
           T L + ++ +   V       +             D F+    L+ +
Sbjct: 109 TRLASRIREQGLTVYGFGERKTPKP-----FVTACDKFIYSDVLRAD 150


>gi|120436105|ref|YP_861791.1| hypothetical protein GFO_1754 [Gramella forsetii KT0803]
 gi|117578255|emb|CAL66724.1| protein containing DUF88 [Gramella forsetii KT0803]
          Length = 245

 Score =  104 bits (260), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 54/165 (32%), Gaps = 29/165 (17%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           +A+ IDG N+ ++          +++++             Y         ++       
Sbjct: 5   LAVLIDGDNIPSA--------HVKEMMEEIAKYGNPTIKRIYGDWTKPHLNKWK------ 50

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDGCF 125
                   +      +++    G  + K++ D  + +DA +   S  ++   + S D  F
Sbjct: 51  ----NVLLENAIHPIQQY----GYTQGKNATDSAMIIDAMDILYSNKVDGFCLVSSDSDF 102

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
           T L   L+    KV  +           D      D F+ +  LK
Sbjct: 103 TRLATRLREASMKVIGIGEKK-----TPDPFIVACDKFIYIEILK 142


>gi|166364770|ref|YP_001657043.1| hypothetical protein MAE_20290 [Microcystis aeruginosa NIES-843]
 gi|166087143|dbj|BAG01851.1| hypothetical protein MAE_20290 [Microcystis aeruginosa NIES-843]
          Length = 249

 Score =  104 bits (260), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 51/175 (29%), Gaps = 29/175 (16%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M     KIAL ID  N  AS            ++       +      Y        + +
Sbjct: 1   MRQSESKIALLIDADNAPAS--------KIEAIVSEIAKYGVANIRKAYGNWKSPALKAW 52

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118
                          +   +  ++F    G    K++ D  + +DA +   ++ L+   I
Sbjct: 53  ----------EECLHEYAIRPVQQFDYTKG----KNATDAAMIIDAMDLLYTQQLDAFAI 98

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
            S D  FT LV  +     KV       +               F+ L  +   +
Sbjct: 99  VSSDCDFTPLVMRILTNGLKVYGFGEKKTPLP-----FVYACSTFLYLETIDQAV 148


>gi|264680306|ref|YP_003280216.1| hypothetical protein CtCNB1_4174 [Comamonas testosteroni CNB-2]
 gi|262210822|gb|ACY34920.1| hypothetical conserved protein [Comamonas testosteroni CNB-2]
          Length = 293

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 54/174 (31%), Gaps = 30/174 (17%)

Query: 1   MFDP-REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
           M +  + +IAL ID  N  A            ++L    +  ++     Y          
Sbjct: 1   MPNDVQPRIALLIDADNAPAEM--------IDEILTELSTFGLINIRRAYGNWTKAGLHG 52

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLV 117
           +               +   +  ++F  + G    K++ D+ + VDA E   +E  +   
Sbjct: 53  WQSKL----------LEYAVRPMQQFDYSKG----KNATDMAMTVDAMELLYTEKPDAFG 98

Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
           I S D  FT LV  L+ K   V                       F+    LK 
Sbjct: 99  IVSSDADFTPLVMHLRAKGAAVYGFGAEQ-----TPRAFVNACSRFLYFDALKE 147


>gi|198282948|ref|YP_002219269.1| hypothetical protein Lferr_0812 [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|218667530|ref|YP_002425151.1| hypothetical protein AFE_0663 [Acidithiobacillus ferrooxidans ATCC
           23270]
 gi|198247469|gb|ACH83062.1| protein of unknown function DUF88 [Acidithiobacillus ferrooxidans
           ATCC 53993]
 gi|218519743|gb|ACK80329.1| conserved hypothetical protein [Acidithiobacillus ferrooxidans ATCC
           23270]
          Length = 318

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 41/171 (23%), Positives = 80/171 (46%), Gaps = 14/171 (8%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSR--AIVIRAYYYTTVVGDPEQ 58
           M +    I +++D  N+  +    G+ + Y  L +       A ++R   Y  V G+  +
Sbjct: 1   MSNGELHIGVYVDAENIRYNG---GYAMRYDVLRRFAGREEEARLLRLNTYMAVDGERMK 57

Query: 59  Q----FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLE 114
           +       +      +   G++++ K  + F +  G    K++ D++LAVD   QSE L+
Sbjct: 58  RDREYRERIRGYQQAVRDLGWKIIEKPVRWFVDEEGNSMSKANADLDLAVDVMLQSERLD 117

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165
            +++ +GDG F  +V ALQ K  +V +++         S +L+ +AD F  
Sbjct: 118 QVLLVTGDGDFLQVVRALQNKGCRVEVLAF-----RNVSRELQYEADAFYP 163


>gi|308272493|emb|CBX29097.1| hypothetical protein N47_J00780 [uncultured Desulfobacterium sp.]
          Length = 251

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 50/173 (28%), Gaps = 29/173 (16%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            +  +K+A+ ID  N   S            LL    +  +      Y    G   + + 
Sbjct: 1   MEHTDKLAVLIDAENAQPSI--------VVGLLAEIANYGVASVKRIYGDWTGPGLKGWK 52

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIF 119
                         Q   +  ++F    G    K+S D  + +DA +   +       I 
Sbjct: 53  ----------DVLLQYSIQPMQQFAYTKG----KNSTDSAMIIDAMDLLYTGNFNGFCIV 98

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
           S D  FT L + ++     V                     D F+    L+ +
Sbjct: 99  SSDSDFTKLASRIRESGLLVYGFGEQK-----TPSAFVSACDKFIYTEVLRAK 146


>gi|146291809|ref|YP_001182233.1| hypothetical protein Sputcn32_0704 [Shewanella putrefaciens CN-32]
 gi|145563499|gb|ABP74434.1| protein of unknown function DUF88 [Shewanella putrefaciens CN-32]
          Length = 268

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 55/168 (32%), Gaps = 29/168 (17%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
              +EKIA+FID  N  A +K       +  +L       ++     Y        + + 
Sbjct: 1   MQNKEKIAVFIDADN--APAKK------FDVVLAELAKHGLISIRKAYGNWKSPNLKPW- 51

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIF 119
                         +   +  ++F    G    K++ D+ L +DA +   ++ ++ + + 
Sbjct: 52  ---------EDILHEYAIQPIQQFDLTKG----KNASDIALVIDAMDILYTKDIDIICLI 98

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
           S D  FT LV       K V       +               F+ L 
Sbjct: 99  SSDCDFTPLVTRALADGKTVFGFGERKAPA-----AFVNSCSRFLYLD 141


>gi|32473273|ref|NP_866267.1| hypothetical protein RB4721 [Rhodopirellula baltica SH 1]
 gi|32397952|emb|CAD73953.1| conserved hypothetical protein [Rhodopirellula baltica SH 1]
          Length = 242

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 55/182 (30%), Gaps = 31/182 (17%)

Query: 3   DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
            P   IAL ID  N  +S            ++    +  IV     Y        + +  
Sbjct: 5   HPEGSIALLIDADNAPSS--------KIEFIISELATYGIVNIRKAYGNWTKRGLEGW-- 54

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFS 120
                        +      + F    G    K++ D+ L +DA +   +  +    + S
Sbjct: 55  --------INVLHEYAIAPTQCFDLIKG----KNATDMALLIDAMDILYTRQVNTFGLVS 102

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
            D  FT LV  L+   K+V       S              +F+ L        + P + 
Sbjct: 103 SDCDFTPLVCRLREDGKQVIGFGRQNSPAP-----FVLACSHFIYLDE--EPTEKAPPKK 155

Query: 181 KK 182
           ++
Sbjct: 156 RR 157


>gi|187735246|ref|YP_001877358.1| protein of unknown function DUF88 [Akkermansia muciniphila ATCC
           BAA-835]
 gi|187425298|gb|ACD04577.1| protein of unknown function DUF88 [Akkermansia muciniphila ATCC
           BAA-835]
          Length = 251

 Score =  104 bits (260), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 37/165 (22%), Positives = 60/165 (36%), Gaps = 30/165 (18%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           +I + ID  N   +        +  KL++   +R  ++    Y     + + + S L   
Sbjct: 5   RIVVLIDADNTNLA--------NLEKLIQYISTRGRIVVKRAYGNWSENLKDKKSALQQ- 55

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGC 124
                 +GF    K    F    G    K++ D+ LA+DA +       +  VI S D  
Sbjct: 56  ------SGF----KTEHYFNCVPG----KNATDIALAIDAVDLLHKNSYDSFVIVSSDSD 101

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
           FT L   L+     V          S AS+  R   D F D+  +
Sbjct: 102 FTPLSIYLKESGVYVIGFG-----KSNASEAFRNGCDEFKDIEKI 141


>gi|268611850|ref|ZP_06145577.1| hypothetical protein RflaF_20381 [Ruminococcus flavefaciens FD-1]
          Length = 303

 Score =  104 bits (259), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 59/183 (32%), Gaps = 29/183 (15%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            +   + A+ ID  N+  ++K   +      +L    +  +V     Y          + 
Sbjct: 1   MEKEMRYAVLIDADNV--AAKYTKY------ILDEVSNYGVVTYKRVYGDWTRPNLAGWK 52

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIF 119
            +                   ++++   G    K++ D  + +DA +   S  ++   I 
Sbjct: 53  NMALDNA----------ITPIQQYSYTTG----KNATDSAMIIDAMDILYSHNVDGFCIV 98

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
           S D  FT L   L+     V  +    +    ++       + F  L  L  E  +   E
Sbjct: 99  SSDSDFTRLAIRLRESGIHVIGMGERKTPKPFST-----ACNAFKYLEILAEEEVQGAGE 153

Query: 180 DKK 182
            +K
Sbjct: 154 TEK 156


>gi|254514031|ref|ZP_05126092.1| protein containing DUF88 [gamma proteobacterium NOR5-3]
 gi|219676274|gb|EED32639.1| protein containing DUF88 [gamma proteobacterium NOR5-3]
          Length = 254

 Score =  104 bits (259), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 53/173 (30%), Gaps = 29/173 (16%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           +    ++IAL ID  N+ AS+           +L+   +   V   + +          +
Sbjct: 13  ILSETKRIALLIDCDNVRASA--------IEGVLEELATHGTVNVRHAHGDWNNPSLSGW 64

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118
           +                  +  ++F    G    K++ D  + +DA +   S  ++   +
Sbjct: 65  AEKLHPHA----------IRPMQQFAYTKG----KNATDSAMIIDAMDLLYSGNVDAFAL 110

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
            + D  FT LV  +      V       +               F+ +  L  
Sbjct: 111 MTSDSDFTPLVLRILESGFPVYGFGEKKTPQP-----FVDSCSPFIFIENLLP 158


>gi|115397957|ref|XP_001214570.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114192761|gb|EAU34461.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 885

 Score =  104 bits (259), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 44/162 (27%), Gaps = 29/162 (17%)

Query: 10  LFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDW 69
           + ID  N  AS   L        +L              Y          +         
Sbjct: 641 ILIDADNAQASVVNL--------VLSEVAKYGTAHVKRAYGDWTSSNLLPWKA------- 685

Query: 70  LHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTT 127
                 +   +  ++F    G    K++ D  + +DA +   +   +   + S D  FT 
Sbjct: 686 ---KLLEHSIQPVQQFAYTHG----KNATDSAMIIDAMDLLYANRFDGFCLVSSDSDFTR 738

Query: 128 LVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
           L A ++     V       +     S       D F+    L
Sbjct: 739 LAARIRESGATVYGFGVHNTPKPFVS-----ACDKFIYTENL 775


>gi|167760471|ref|ZP_02432598.1| hypothetical protein CLOSCI_02845 [Clostridium scindens ATCC 35704]
 gi|167661837|gb|EDS05967.1| hypothetical protein CLOSCI_02845 [Clostridium scindens ATCC 35704]
          Length = 311

 Score =  104 bits (259), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 55/168 (32%), Gaps = 29/168 (17%)

Query: 9   ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68
           AL ID  N+  S+K        + +L       ++     Y          +        
Sbjct: 7   ALLIDADNV--SAKY------IKPILTELSKYGVITYKRIYGDWTSTQNSSWK------- 51

Query: 69  WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDGCFT 126
                         ++F+   G    K++ D  + +DA +   +  ++   I S D  FT
Sbjct: 52  ---EELLTNSITPIQQFSYTQG----KNATDSAMIIDAMDILYTNDVDGFCIVSSDSDFT 104

Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
            LV+ ++   K V  +    +         R+  D F  L  L NE  
Sbjct: 105 RLVSRIRESGKMVIGMGENKTPEP-----FRKACDKFTILENLLNEQE 147


>gi|113869484|ref|YP_727973.1| hypothetical protein H16_A3546 [Ralstonia eutropha H16]
 gi|113528260|emb|CAJ94605.1| uncharacterized conserved protein [Ralstonia eutropha H16]
          Length = 417

 Score =  103 bits (258), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 46/167 (27%), Gaps = 29/167 (17%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           +A+ ID  N   +            LL       +      Y          +       
Sbjct: 12  LAVLIDADNAAPAI--------VEGLLAEVAKYGVAAVKRIYGDWTRPNLAGWK------ 57

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCF 125
                       +  ++F    G    K++ D  + +DA +   +   +   I S D  F
Sbjct: 58  ----ERLLSHSIQPIQQFRYTVG----KNATDSAMIIDAMDLLYTGRFDGFCIVSSDSDF 109

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
           T L + ++ +   V       +             D F+    L+ +
Sbjct: 110 TRLASRIREQGLTVYGFGERKTPKP-----FVTACDKFIYSDVLRAD 151


>gi|166033313|ref|ZP_02236142.1| hypothetical protein DORFOR_03039 [Dorea formicigenerans ATCC
           27755]
 gi|166027670|gb|EDR46427.1| hypothetical protein DORFOR_03039 [Dorea formicigenerans ATCC
           27755]
          Length = 308

 Score =  103 bits (258), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 56/168 (33%), Gaps = 29/168 (17%)

Query: 9   ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68
           AL ID  N+  S+K        + +L        +     Y          +        
Sbjct: 7   ALLIDADNV--SAKY------IKPILTELSKYGNITYKRIYGDWTNTQHSSWK------- 51

Query: 69  WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDGCFT 126
                  +      ++F+   G    K+S D  + +DA +   ++ ++   I S D  FT
Sbjct: 52  ---DELLKNSITPIQQFSYTQG----KNSTDSAMIIDAMDILYAKDVDGFCIVSSDSDFT 104

Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
            LV+ L+   K V  +    +         R+  D F  L  L +E  
Sbjct: 105 RLVSRLRESGKMVIGMGENKTPEP-----FRKACDKFTILENLLSEKG 147


>gi|330983390|gb|EGH81493.1| hypothetical protein PLA107_00070 [Pseudomonas syringae pv.
           lachrymans str. M301315]
          Length = 294

 Score =  103 bits (257), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 56/179 (31%), Gaps = 29/179 (16%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
             P   IA+FID  N                +L    +   V     +          + 
Sbjct: 13  EQPAMNIAMFIDADNAPKG--------HIGDVLDELSNHGCVSIRRAFGNWRKQALDSW- 63

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIF 119
                          V+ + A +  +     + K++ D+ +  DA +      ++   + 
Sbjct: 64  -------------VPVLHQHAIQPVQVFDLIKGKNASDIAMCCDAMDVLYNKPVDVFCLV 110

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
           S D  FT LV  L+ + K+V  V         A+        +F+ L  +  E++    
Sbjct: 111 SSDSDFTPLVTKLRSEGKQVIGVGERK-----AAAAFVDACSFFIFLDDIAAEVSEAQA 164


>gi|257063827|ref|YP_003143499.1| hypothetical protein Shel_11150 [Slackia heliotrinireducens DSM
           20476]
 gi|256791480|gb|ACV22150.1| uncharacterized conserved protein [Slackia heliotrinireducens DSM
           20476]
          Length = 314

 Score =  103 bits (257), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 53/165 (32%), Gaps = 29/165 (17%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           KIAL IDG N+ A+            +L              Y        + +      
Sbjct: 5   KIALLIDGDNVSANY--------IGSILDELTETGTTTIKRIYGDWTRPEMRSWRDQL-- 54

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDGC 124
                  G  V  +  ++F+   G    K++ D  L +DA +      ++   I S D  
Sbjct: 55  ------LGRSV--QPVQQFSNVSG----KNATDSALIIDAMDILYGRDVDAFCIVSSDSD 102

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
           FT L + L    K V  +           D  R     F++L  L
Sbjct: 103 FTRLASRLTESGKVVIGMGEEK-----TPDAFRNACTKFVNLENL 142


>gi|117922000|ref|YP_871192.1| hypothetical protein Shewana3_3564 [Shewanella sp. ANA-3]
 gi|117614332|gb|ABK49786.1| protein of unknown function DUF88 [Shewanella sp. ANA-3]
          Length = 268

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 52/168 (30%), Gaps = 29/168 (17%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
              +EKIA+FID  N      A     D   +L       ++     Y        + + 
Sbjct: 1   MQNKEKIAVFIDADN------APARKFD--VVLAELAKHGLISIRKAYGNWKSPNLKPW- 51

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIF 119
                         +   +  ++F    G    K++ D+ L +D  +   ++ ++ + + 
Sbjct: 52  ---------EEILHEYAIQPIQQFDLTKG----KNASDIALVIDVMDILYTKDIDIICLI 98

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
           S D  FT LV       K V       +               F+ L 
Sbjct: 99  SSDCDFTPLVTRALADGKTVFGFGERKAPA-----AFVNSCSRFLYLD 141


>gi|153854120|ref|ZP_01995428.1| hypothetical protein DORLON_01419 [Dorea longicatena DSM 13814]
 gi|149753169|gb|EDM63100.1| hypothetical protein DORLON_01419 [Dorea longicatena DSM 13814]
          Length = 309

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 55/166 (33%), Gaps = 29/166 (17%)

Query: 9   ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68
           AL ID  N+  S+K        + +L       I+     Y          +        
Sbjct: 7   ALLIDADNV--SAKY------IKPILTELSKYGIITYKRIYGDWTSTQHSSWK------- 51

Query: 69  WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDGCFT 126
                         ++F+   G    K+S D  + +DA +   +  ++   I S D  FT
Sbjct: 52  ---DELLTNSITPIQQFSYTQG----KNSTDSAMIIDAMDILYTNDVDGFCIVSSDSDFT 104

Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
            LV+ L+   K V  +    +         R+  D F  L  L +E
Sbjct: 105 RLVSRLRESGKMVIGMGENKTPEP-----FRKACDKFTILENLMSE 145


>gi|291297150|ref|YP_003508548.1| hypothetical protein Mrub_2781 [Meiothermus ruber DSM 1279]
 gi|290472109|gb|ADD29528.1| protein of unknown function DUF88 [Meiothermus ruber DSM 1279]
          Length = 190

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 44/170 (25%), Positives = 81/170 (47%), Gaps = 17/170 (10%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           K ALFIDG+ +Y ++K LG++ID+RK +  F     +  A+YY  V    +++       
Sbjct: 2   KTALFIDGSYMYDAAKRLGWNIDHRKAIGVFSKPEDLYNAFYYAPVTDSNDERQQK---F 58

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126
           LD L + G+ V ++                  +  +A D    +   E  V+ SG G   
Sbjct: 59  LDALVFMGYTVRSR----------ETHGDPRFEAMIATDLLVTAPRWERAVVASGSGDLA 108

Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
             ++AL+ + K++ ++      P +   +LR Q+D ++DL  L+ ++ R 
Sbjct: 109 HTLSALRAQGKEIHLL----GVPELTDLELRNQSDRYLDLRELQAQLERT 154


>gi|331700009|ref|YP_004336248.1| hypothetical protein Psed_6296 [Pseudonocardia dioxanivorans
           CB1190]
 gi|326954698|gb|AEA28395.1| Domain of unknown function DUF88 [Pseudonocardia dioxanivorans
           CB1190]
          Length = 367

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 42/174 (24%), Positives = 65/174 (37%), Gaps = 23/174 (13%)

Query: 1   MFDPREKIALFIDGANLYASSKA-LGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58
           M    E+IALF+D  NL   ++  LG    D+  +  A   R  V+    Y         
Sbjct: 1   MISDDERIALFLDYENLAIGAREGLGVSPFDFGPIADALAERGRVVARRAYA-------- 52

Query: 59  QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG---LEH 115
            +S        L     +++    +           K++ D++LAVDA E +     +  
Sbjct: 53  DWSYFDDDRRLLARAQVELIEIPQR------LGGSRKNAADIKLAVDAIELAYERGFVTT 106

Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
             I +GD  FT LV  L+   K+V  +       S  S  L    D F+    L
Sbjct: 107 FAIGTGDSDFTPLVHKLREMDKRVIGI----GVQSSTSALLPPACDEFLFYDRL 156


>gi|84684164|ref|ZP_01012066.1| hypothetical protein 1099457000262_RB2654_16986 [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84667917|gb|EAQ14385.1| hypothetical protein RB2654_16986 [Rhodobacterales bacterium
           HTCC2654]
          Length = 234

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 59/184 (32%), Gaps = 29/184 (15%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M + +  +A+ ID  N+ A             +LK   +         Y          +
Sbjct: 1   MPETKPLLAVLIDADNIPARFAD--------GVLKEITTYGEPALRRVYGDWSSQRLGPW 52

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVI 118
                          ++     +E     G    K++ D+ L +DA +       +  V+
Sbjct: 53  KSKVQ----------ELGMVAHQESANTKG----KNASDIGLVIDAMDLLHTGRFDGFVL 98

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
            S D  FT L   ++ +   V  +           + LR     F+ +  + +E A  P 
Sbjct: 99  VSSDSDFTALANRIREQGLTVIGIGEGK-----TPESLRNVCSRFVMIENIVDEEAEKPA 153

Query: 179 EDKK 182
           E KK
Sbjct: 154 EKKK 157


>gi|197301939|ref|ZP_03167003.1| hypothetical protein RUMLAC_00661 [Ruminococcus lactaris ATCC
           29176]
 gi|197299007|gb|EDY33543.1| hypothetical protein RUMLAC_00661 [Ruminococcus lactaris ATCC
           29176]
          Length = 322

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 56/170 (32%), Gaps = 29/170 (17%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
            ++ AL ID  N+  S+K        + +L        V     Y          +    
Sbjct: 2   EDRFALLIDADNV--SAKY------IKPILDELSKYGNVTYKRIYGDWTKTNNASWK--- 50

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122
                      Q      ++F+   G    K++ D  + +DA +   +  LE   + S D
Sbjct: 51  -------EELLQNSITPIQQFSYTHG----KNATDSAMIIDAMDMLYTSELEGFCLVSSD 99

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
             FT L + L+   K V  +    +         R+  D F +L  L  +
Sbjct: 100 SDFTKLASRLRESGKTVIGMGEGKTPSP-----FRKACDIFTELELLLED 144


>gi|147920970|ref|YP_685221.1| hypothetical protein RCIX466 [uncultured methanogenic archaeon
           RC-I]
 gi|110620617|emb|CAJ35895.1| conserved hypothetical protein [uncultured methanogenic archaeon
           RC-I]
          Length = 254

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 26/178 (14%), Positives = 51/178 (28%), Gaps = 29/178 (16%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
             + IA+ IDG N   S           ++L        V     Y          +   
Sbjct: 10  SNKNIAMLIDGDNAQPSL--------IEEMLSEAGKYGNVTVRRIYGDWTMSSMNSWKDY 61

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSG 121
                       +   +  ++F    G    K++ D  + +DA +   +  ++   I S 
Sbjct: 62  LH----------KHAFQPIQQFRYTKG----KNATDSAMIIDAMDILYAGHVDGFCIVSS 107

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
           D  +T L   L+     V  +               +    F  +  L  +    P++
Sbjct: 108 DSDYTKLATRLRESGLFVMGIG-----RKDTPQSFVKACVIFTFVENLSPDEEETPEK 160


>gi|322704309|gb|EFY95906.1| hypothetical protein MAA_08714 [Metarhizium anisopliae ARSEF 23]
          Length = 251

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 27/169 (15%), Positives = 49/169 (28%), Gaps = 29/169 (17%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           K+A+ ID  N   +   +        LL              Y    G   + +      
Sbjct: 8   KLAVLIDADNAQPNMAGV--------LLAEIAKYGTAFVKRAYGDWTGTNLRGWK----- 54

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124
                    +      ++F    G    K+S D  + +DA +   S   +   + S D  
Sbjct: 55  -----EQLLENSILPIQQFAYTQG----KNSTDAAMVIDAMDLLYSNRFDGFCLVSSDSD 105

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
           FT L + ++     V       +        L    D F+ +  L   +
Sbjct: 106 FTRLASRIRESGLLVYGFGERKAPK-----ALVSACDKFIYIENLSQNV 149


>gi|71066424|ref|YP_265151.1| hypothetical protein Psyc_1869 [Psychrobacter arcticus 273-4]
 gi|71039409|gb|AAZ19717.1| conserved hypothetical protein [Psychrobacter arcticus 273-4]
          Length = 335

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 48/170 (28%), Gaps = 29/170 (17%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
            +K A+ ID  N    S           +L+      I      Y     +  Q +    
Sbjct: 1   MKKFAVLIDADNSSHRS--------IEPILEEIAKYGIASIKRIYGDWSIEALQSWRDKL 52

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGD 122
                             ++F         K + D++L +DA +   +  ++   I S D
Sbjct: 53  LPNA----------ITPVQQFAYVS----QKDATDMKLVIDAMDILYAGDVDGFCIVSSD 98

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
             FT L + ++     V                     D F+ +  L  E
Sbjct: 99  SDFTPLASRIRESGLLVYGFG-----KKSTVKSFVNACDKFVYVENLLPE 143


>gi|255292460|dbj|BAH89576.1| hypothetical protein [uncultured bacterium]
          Length = 238

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 60/183 (32%), Gaps = 29/183 (15%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M + ++KIALFID  N  AS         +  +L       +V     Y        + +
Sbjct: 1   MNELKQKIALFIDADNAPAS--------KFEDVLSEVAKYGVVTIRKAYGNWKSPTLRPW 52

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVI 118
                          +   +  +++       + K++ D+ L +DA +   ++ ++ +  
Sbjct: 53  ----------EELLHEYAIQPVQQYD----LTKRKNASDIALVIDAMDVMYTKDIDVMCF 98

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
            S D  FT +      + K V       +               F+ L    +   ++  
Sbjct: 99  ISSDCDFTPMATRAIAEGKVVLGFGERKTPLP-----FVNACSKFLFLDQPDSVEEKNVS 153

Query: 179 EDK 181
           + K
Sbjct: 154 KPK 156


>gi|288939925|ref|YP_003442165.1| hypothetical protein Alvin_0164 [Allochromatium vinosum DSM 180]
 gi|288895297|gb|ADC61133.1| protein of unknown function DUF88 [Allochromatium vinosum DSM 180]
          Length = 277

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 35/162 (21%), Positives = 75/162 (46%), Gaps = 13/162 (8%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRS-RAIVIRAYYYTTVVGDPEQQF----S 61
           ++ +F+D  N+  +    G+ + Y  L +       ++ R   Y     +  ++      
Sbjct: 6   RVGVFVDAENVRYNG---GYQMRYDILRRFAAREGGVLQRLNTYMAYDAERAREDYEYKK 62

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
             H     +   G+++ AK  + +T++ G    K++ D+++AVDA  Q+  L+ +++ +G
Sbjct: 63  KAHAYQQMVRDFGWKITAKTVRRYTDDNGNVTTKANADLDMAVDAMLQANRLDQVLLVTG 122

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163
           DG F  +V ALQ    +V ++          S  L+++ D F
Sbjct: 123 DGDFLQVVEALQNTGCRVELIGF-----KNVSRLLQQRVDAF 159


>gi|153011951|ref|YP_001373163.1| hypothetical protein Oant_4745 [Ochrobactrum anthropi ATCC 49188]
 gi|151563839|gb|ABS17334.1| protein of unknown function DUF88 [Ochrobactrum anthropi ATCC
           49188]
          Length = 246

 Score =  103 bits (257), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 55/174 (31%), Gaps = 30/174 (17%)

Query: 1   MFDPR-EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
           M +PR  ++A+ ID  N  AS+K +        L +             Y        + 
Sbjct: 1   MAEPRSPRLAVLIDADN--ASAKIV------DGLFEEIAKIGEASVRRIYGDFANPRSKA 52

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLV 117
           +               +      ++F    G    K++ D+ L +DA +   S   +   
Sbjct: 53  W----------IDVLARHAIIPQQQFAYTAG----KNASDITLVIDAMDLLHSGRFDGFC 98

Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
           + S D  FT L + ++ +   V              +  R+    F+    L  
Sbjct: 99  LVSSDSDFTRLASRIREQGIDVFGFGEQK-----TPESFRQACRRFIYTENLLP 147


>gi|78188294|ref|YP_378632.1| hypothetical protein Cag_0316 [Chlorobium chlorochromatii CaD3]
 gi|78170493|gb|ABB27589.1| conserved hypothetical protein [Chlorobium chlorochromatii CaD3]
          Length = 264

 Score =  103 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 52/182 (28%), Gaps = 29/182 (15%)

Query: 3   DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
           +   ++A+ ID  N  A+            LL              Y        + +  
Sbjct: 6   EKTVRLAVLIDADNTQANI--------IDGLLAEVAKYGTASVKRIYGDWTSPSLRSWK- 56

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
                        +   +  ++F    G    K++ D  + +DA +   +       I S
Sbjct: 57  ---------EMLLEHSIQPIQQFGYTKG----KNATDSAMIIDAMDLLYTGKFHGFCIVS 103

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
            D  FT L + ++     V                     D F+ +  L+ +I  +    
Sbjct: 104 SDSDFTKLASRIREAGLVVYGFGEKK-----TPSAFVSACDKFIYIEVLRAKINDNEQIA 158

Query: 181 KK 182
           +K
Sbjct: 159 RK 160


>gi|325264389|ref|ZP_08131120.1| hypothetical protein HMPREF0240_03396 [Clostridium sp. D5]
 gi|324030460|gb|EGB91744.1| hypothetical protein HMPREF0240_03396 [Clostridium sp. D5]
          Length = 321

 Score =  103 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 34/178 (19%), Positives = 58/178 (32%), Gaps = 31/178 (17%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
            +K AL ID  N+  S+K        + +L        V     Y          +    
Sbjct: 2   EDKYALLIDADNV--SAKY------IKPILDELSKYGNVTYKRIYGDWTSTYNSSWK--- 50

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122
                      Q      ++F+   G    K++ D  + +DA +   +  LE   + S D
Sbjct: 51  -------EELLQNSITPIQQFSYTHG----KNATDSAMIIDAMDMLYTSELEGFCLVSSD 99

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE--IARDPD 178
             FT L + L+   K V  +    +         R+  D F  L  L  +  I ++  
Sbjct: 100 SDFTKLASRLRESGKTVIGMGEDKTPAP-----FRKACDIFTVLELLLEDNTIEKEEK 152


>gi|16330259|ref|NP_440987.1| hypothetical protein slr1870 [Synechocystis sp. PCC 6803]
 gi|1652748|dbj|BAA17667.1| slr1870 [Synechocystis sp. PCC 6803]
          Length = 249

 Score =  103 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 52/176 (29%), Gaps = 30/176 (17%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M      IAL ID  N  AS            ++       +      Y        + +
Sbjct: 1   MPQSESNIALLIDADNAPAS--------KIEAIVSEIAKYGVANIRKAYGNWKSPNLKAW 52

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118
                          +   +  ++F    G    K++ D  + +DA +   ++ L+   I
Sbjct: 53  ----------EECLHEYAIRPVQQFDYTKG----KNATDAAMIIDAMDLLYTQRLDAFAI 98

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
            S D  FT LV  +     KV       +               F+ L  + ++I 
Sbjct: 99  VSSDCDFTPLVMRILTNGLKVYGFGEKKTPLP-----FVYACSTFLYLESI-DQIE 148


>gi|330943352|gb|EGH45725.1| hypothetical protein PSYPI_26829 [Pseudomonas syringae pv. pisi
           str. 1704B]
          Length = 264

 Score =  103 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 57/171 (33%), Gaps = 31/171 (18%)

Query: 1   MFDPREK--IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58
           M +  +   +A+FID  N  A SK LG       +L    S   V     Y         
Sbjct: 1   MSNQLQNLNVAMFIDADN--APSKKLG------SVLAELASYGAVSIRRAYGNWKSPSLD 52

Query: 59  QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHL 116
            +  +            +   +  ++F    G    K++ D+ +AVDA +      ++  
Sbjct: 53  PWGKVLH----------EHAIQPVQQFDLVKG----KNATDMAMAVDAMDVLFNKPVDVF 98

Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
            + S D  FT LV  L+ + K+V       +               F+   
Sbjct: 99  CLVSSDCDFTPLVMRLRAEGKQVVGFGERKAPEP-----FVNACSRFLYFD 144


>gi|291515800|emb|CBK65010.1| Protein of unknown function DUF88 [Alistipes shahii WAL 8301]
          Length = 272

 Score =  103 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 22/171 (12%), Positives = 48/171 (28%), Gaps = 29/171 (16%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M    +K A+ +D  N+             + +L    +         Y           
Sbjct: 1   MELNDKKFAVLVDADNISHR--------KIKDILDEIANYGTPTIKRIYGDFTNPK---- 48

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVI 118
                          +      +++    G    K++ D  L +DA +      +    I
Sbjct: 49  ------FAAWKEVLLENSITPIQQYAYTTG----KNATDSALIIDAMDILHKEGVNGFCI 98

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
            S D  +T L + ++   ++V       +          +  D F+ +  L
Sbjct: 99  VSSDSDYTRLASRIRESGREVLGFGEKKTPKP-----FIKSCDKFIYVEIL 144


>gi|146340536|ref|YP_001205584.1| hypothetical protein BRADO3579 [Bradyrhizobium sp. ORS278]
 gi|146193342|emb|CAL77358.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
          Length = 263

 Score =  103 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 27/169 (15%), Positives = 55/169 (32%), Gaps = 29/169 (17%)

Query: 6   EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
            ++A+ ID  N  AS+K +        L +             Y        + ++    
Sbjct: 8   PRLAVLIDADN--ASAKIV------DGLFEEIAKIGEASVRRIYGDFSSPRSKPWADTLA 59

Query: 66  LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDG 123
                     +      ++F    G    K++ D+ L +DA +   S   +   + S D 
Sbjct: 60  ----------RHAIVPQQQFAYTTG----KNASDITLVIDAMDLLHSGRFDGFCLVSSDS 105

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
            FT L A ++ +   V              +  R+    F+    L+++
Sbjct: 106 DFTRLAARIREQGIDVFGFGEQK-----TPESFRQACRRFIYTENLRSD 149


>gi|266625430|ref|ZP_06118365.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479]
 gi|288862663|gb|EFC94961.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479]
          Length = 306

 Score =  103 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 59/171 (34%), Gaps = 29/171 (16%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
             +K A+ ID  N+  S+K + +      +L       ++     Y         ++   
Sbjct: 2   NDKKFAVLIDSDNI--SAKYISY------ILDEMTKYGVITYKRIYGDWTSSQMGKWKQ- 52

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSG 121
                       +      ++F+   G    K++ D  L +DA +   ++ ++   I S 
Sbjct: 53  ---------ELLENSITPIQQFSNTVG----KNATDSALIIDAMDLLYTDNVDGFCIVSS 99

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
           D  FT L + L+   K+V  +              R     F +L  L ++
Sbjct: 100 DSDFTKLASRLRESGKEVIGMGEEK-----TPKSFRAACTVFTNLEILLDQ 145


>gi|152992773|ref|YP_001358494.1| hypothetical protein SUN_1182 [Sulfurovum sp. NBC37-1]
 gi|151424634|dbj|BAF72137.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
          Length = 249

 Score =  103 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 52/171 (30%), Gaps = 29/171 (16%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M    + IALFID  N+   S           ++       +V     Y     D  + +
Sbjct: 1   MTKKEDHIALFIDCDNISHRS--------IEGIINELSKYGVVNIRQAYGNWTKDNLKNW 52

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVI 118
                          +   K  ++F  +      K++ D+ + +DA +      ++    
Sbjct: 53  ----------EDKLLEFAIKPIQQFDYSKN----KNATDILMTIDAIDLLHTKDIDAFAF 98

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
            + D  FT +V  +Q +  KV       +               F+    L
Sbjct: 99  ATSDSDFTPVVMRVQAEGIKVFGFGEKKTPKP-----FMAACSQFIFTEKL 144


>gi|148255393|ref|YP_001239978.1| hypothetical protein BBta_4005 [Bradyrhizobium sp. BTAi1]
 gi|146407566|gb|ABQ36072.1| hypothetical protein BBta_4005 [Bradyrhizobium sp. BTAi1]
          Length = 263

 Score =  103 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 58/177 (32%), Gaps = 29/177 (16%)

Query: 6   EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
            ++A+ ID  N  AS+K +        L +             Y        + ++    
Sbjct: 8   PRLAVLIDADN--ASAKIV------DGLFEEIAKIGEASVRRIYGDFSSPRSKPWADTLA 59

Query: 66  LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDG 123
                     +      ++F    G    K++ D+ L +DA +   S   +   + S D 
Sbjct: 60  ----------RHAIVPQQQFAYTTG----KNASDITLVIDAMDLLHSGRFDGFCLVSSDS 105

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
            FT L A ++ +   V              +  R+    F+    L+++ A   D D
Sbjct: 106 DFTRLAARIREQGIDVFGFGEQK-----TPESFRQACRRFIYTENLRSDAASSKDAD 157


>gi|114319473|ref|YP_741156.1| hypothetical protein Mlg_0311 [Alkalilimnicola ehrlichii MLHE-1]
 gi|114225867|gb|ABI55666.1| protein of unknown function DUF88 [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 274

 Score =  103 bits (256), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 41/169 (24%), Positives = 80/169 (47%), Gaps = 13/169 (7%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA-IVIRAYYYTTVVGDPEQQ 59
           M   +  + +++D AN+  +    GF + Y  L +         IR   Y T      ++
Sbjct: 1   MAGSQGGVGIYVDAANIQMNG---GFGMQYDVLREFACRTGAEPIRLNAYVTYDEQRAER 57

Query: 60  F----SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEH 115
                  ++     +   G++V+ K  + + +  G    K++ D+++AVDA  QS+ L  
Sbjct: 58  DRGYHQRVNNFFQSIREFGYKVIIKKYRWYRDEEGNAYAKANADLDMAVDALLQSQSLTR 117

Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
           +++ +GDG F  +V ALQ +  +V +++         S +LRR+AD F+
Sbjct: 118 VMMVTGDGDFVQVVRALQNQGCRVELLAFD-----NISSELRREADVFV 161


>gi|67904058|ref|XP_682285.1| hypothetical protein AN9016.2 [Aspergillus nidulans FGSC A4]
 gi|40745192|gb|EAA64348.1| hypothetical protein AN9016.2 [Aspergillus nidulans FGSC A4]
          Length = 404

 Score =  103 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 25/172 (14%), Positives = 47/172 (27%), Gaps = 30/172 (17%)

Query: 1   MFDPR-EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
           M +     + + +D  N   S+  L        +L        V     Y        + 
Sbjct: 143 MANNTTPNLVVLVDADNAMPSTARL--------ILAEVAKYGTVYVKRAYGDWTSTSLKG 194

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLV 117
           +                   +  ++F    G    K+S D  + +DA +   S       
Sbjct: 195 WKK----------ELLSQSIQPFQQFAYTNG----KNSTDSAMIIDAMDLLYSNRFGGFC 240

Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
           + S D  FT L A ++     V       +     +       + F+    L
Sbjct: 241 LVSSDSDFTRLAARIRESGLTVYGFGEQKTPKPFVA-----ACNKFIYTENL 287


>gi|46578508|ref|YP_009316.1| hypothetical protein DVU0091 [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120603909|ref|YP_968309.1| hypothetical protein Dvul_2871 [Desulfovibrio vulgaris DP4]
 gi|46447919|gb|AAS94575.1| conserved hypothetical protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120564138|gb|ABM29882.1| conserved hypothetical protein [Desulfovibrio vulgaris DP4]
 gi|311232435|gb|ADP85289.1| protein of unknown function DUF88 [Desulfovibrio vulgaris RCH1]
          Length = 240

 Score =  103 bits (256), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 50/179 (27%), Gaps = 30/179 (16%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           ++A+ ID  N  A +           LL       +      Y        Q +      
Sbjct: 2   RLAVLIDADNAKADA--------ISDLLAEVSKFGVATVKRAYGDWTTTNLQGWKKQLH- 52

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124
                    +   +  ++F+   G    K+S D  + +D  +   +   +   I S D  
Sbjct: 53  ---------KYAIQPMQQFSYTRG----KNSTDASMIIDGMDLLYTGNFDGFCIVSSDCD 99

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL-KNEIARDPDEDKK 182
           FT L    +     V       +     +       D F+    L K E    P    K
Sbjct: 100 FTRLATRFREAGLSVYGFGEKKTPEPFVA-----ACDRFIFTEILGKGETQEKPAATGK 153


>gi|257791681|ref|YP_003182287.1| hypothetical protein Elen_1934 [Eggerthella lenta DSM 2243]
 gi|317487854|ref|ZP_07946446.1| hypothetical protein HMPREF1023_00144 [Eggerthella sp. 1_3_56FAA]
 gi|325830636|ref|ZP_08164057.1| hypothetical protein HMPREF9404_5483 [Eggerthella sp. HGA1]
 gi|257475578|gb|ACV55898.1| protein of unknown function DUF88 [Eggerthella lenta DSM 2243]
 gi|316912980|gb|EFV34497.1| hypothetical protein HMPREF1023_00144 [Eggerthella sp. 1_3_56FAA]
 gi|325487382|gb|EGC89824.1| hypothetical protein HMPREF9404_5483 [Eggerthella sp. HGA1]
          Length = 552

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 54/171 (31%), Gaps = 29/171 (16%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
             ++ AL ID  N+  S+K        + +         V     Y         ++   
Sbjct: 7   SEKRFALLIDADNV--SAKY------IKPITDELSKYGTVTYKRIYGDWTLTLHAKWK-- 56

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSG 121
                       +      ++F    G  + K++ D  + +DA +   +  +E   I S 
Sbjct: 57  --------DALLENSITPIQQF----GYTQGKNATDSAMIIDAMDILYTRSVEGFCIVSS 104

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
           D  FT L + ++     V  +    +         R+  D F  L  L  +
Sbjct: 105 DSDFTRLASRIRESGLTVIGMGEKKTPTP-----FRKACDIFTTLELLLGD 150


>gi|325267846|ref|ZP_08134496.1| protein of hypothetical function DUF88 [Kingella denitrificans ATCC
           33394]
 gi|324980727|gb|EGC16389.1| protein of hypothetical function DUF88 [Kingella denitrificans ATCC
           33394]
          Length = 244

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 56/184 (30%), Gaps = 29/184 (15%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M      +AL ID  N      A    ID+  ++    +   V+    Y     D  + +
Sbjct: 1   MEKSNLIVALLIDADN------APAKKIDF--IMSELANYGSVMVRKIYGNWKDDRLKSW 52

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVI 118
                                 ++F    G    K++ D+ + +D  +      ++   +
Sbjct: 53  ----------ENVLLDYALAPVQQFDYTKG----KNATDMAMTIDVMDLLFLNKVDVFCL 98

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
            S D  FT L   ++   K+V                L      F+ L   ++  A    
Sbjct: 99  VSSDCDFTPLAMRIKASGKQVIGFGEHK-----TPKSLVAACSKFLFLDNAQSRTAPTEQ 153

Query: 179 EDKK 182
           + ++
Sbjct: 154 QVQR 157


>gi|99080500|ref|YP_612654.1| hypothetical protein TM1040_0659 [Ruegeria sp. TM1040]
 gi|99036780|gb|ABF63392.1| protein of unknown function DUF88 [Ruegeria sp. TM1040]
          Length = 262

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 56/171 (32%), Gaps = 28/171 (16%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           +A+ ID  N+  S+K  G         +   S         Y    G   Q +S      
Sbjct: 10  LAVLIDADNI--SAKFAGAMF------EEIASLGEASIRRIYGDFSGGGPQGWSKDKLAA 61

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDGCF 125
                          ++F    G    K++ D+ L +DA +   S   +  V+ S D  F
Sbjct: 62  FA---------IVPHQQFANTTG----KNASDIALVIDAMDILHSGRFDGFVLISSDSDF 108

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
           T L + ++ +   V  +               R    F+ +  L  E+ +D
Sbjct: 109 TRLASRIREQGLDVYGMGMRK-----TPAAFVRACKRFIYVENLLTEVPKD 154


>gi|291550583|emb|CBL26845.1| Uncharacterized conserved protein [Ruminococcus torques L2-14]
          Length = 339

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 60/181 (33%), Gaps = 31/181 (17%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
            ++ AL ID  N+  S+K        + +L        V     Y          +    
Sbjct: 2   EDRFALLIDADNV--SAKY------IKPILDELSKYGNVTYKRIYGDWTKSNSASWK--- 50

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122
                      Q      ++F+   G    K+S D  + +DA +   +  LE   + S D
Sbjct: 51  -------EELLQNSITPIQQFSYTQG----KNSTDSAMIIDAMDMLYTSELEGFCLVSSD 99

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE--IARDPDED 180
             FT L + L+   K V  +    +         R+  D F  L  L  +  I ++  E 
Sbjct: 100 SDFTKLASRLRESGKMVIGMGEDKTPLP-----FRKACDIFTVLEVLLEDNTIEKEESEG 154

Query: 181 K 181
           K
Sbjct: 155 K 155


>gi|326319000|ref|YP_004236672.1| hypothetical protein Acav_4221 [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|323375836|gb|ADX48105.1| Domain of unknown function DUF88 [Acidovorax avenae subsp. avenae
           ATCC 19860]
          Length = 298

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 50/163 (30%), Gaps = 29/163 (17%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           +IAL ID  N  A            ++L    +  ++     Y          +      
Sbjct: 14  RIALLIDADNAPAEM--------IDEILTELSTLGVISIRRAYGNWTKSALSGWQSKL-- 63

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124
                    +   +  ++F  +      K++ D+ + VDA E   ++  +   I S D  
Sbjct: 64  --------LEFAVRPIQQFDYSK----RKNATDMAMTVDAMELLYTDRPDAFGIVSSDAD 111

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
           FT LV  L+ K   V       +               F+ L 
Sbjct: 112 FTPLVMHLRAKGAAVYGFGAQQTPRP-----FVNACSRFLYLE 149


>gi|227824978|ref|ZP_03989810.1| conserved hypothetical protein [Acidaminococcus sp. D21]
 gi|226905477|gb|EEH91395.1| conserved hypothetical protein [Acidaminococcus sp. D21]
          Length = 262

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 54/178 (30%), Gaps = 29/178 (16%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            +  +K AL ID  N+          ID   +L    +   VI    Y          + 
Sbjct: 1   MEQDKKFALLIDAENI------SPQYIDI--ILSEANNLGNVIYKRIYGNWTSPQMGSWK 52

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIF 119
                             +  ++++   G    K+S D  L +D  +      L+   I 
Sbjct: 53  STILDNA----------IQPVQQYSNTSG----KNSSDSALIIDTMDLLYRTQLDGFCIV 98

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
           S D  FT L + L+   K V  +                  + F+ L  L  E  R+ 
Sbjct: 99  SSDSDFTRLASRLRESDKYVLGMGESK-----TPRSFISACNRFLYLDVLYAESKRED 151


>gi|300770545|ref|ZP_07080424.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
           33861]
 gi|300763021|gb|EFK59838.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
           33861]
          Length = 276

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 60/186 (32%), Gaps = 31/186 (16%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M D +  IA+ IDG N  AS          ++L+              Y          +
Sbjct: 18  MNDSKFNIAVLIDGDNAQASL--------IKELIAEVSKYGKATIRRIYGDWTSPQMNSW 69

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVI 118
             +            +      ++F+   G    K+S D  L +DA +    + ++   I
Sbjct: 70  KDILN----------EYSINPIQKFSYTSG----KNSTDSSLIIDAMDILHGKSVDGFCI 115

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL--KNEIARD 176
            S D  +T L   ++ +   V  +        +         + F     L    EIA  
Sbjct: 116 VSSDSDYTGLAKRIREEGLFVMGIG-----RKITPIAFVNSCEIFTFTENLVEVEEIAAI 170

Query: 177 PDEDKK 182
           P ++KK
Sbjct: 171 PADNKK 176


>gi|87200042|ref|YP_497299.1| hypothetical protein Saro_2026 [Novosphingobium aromaticivorans DSM
           12444]
 gi|87135723|gb|ABD26465.1| hypothetical protein Saro_2026 [Novosphingobium aromaticivorans DSM
           12444]
          Length = 270

 Score =  102 bits (255), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 57/175 (32%), Gaps = 31/175 (17%)

Query: 1   MFDPR--EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58
           M +     ++A+ ID  N  AS+K          L +             Y    G   +
Sbjct: 1   MTNETRPPRLAVLIDADN--ASAKIA------TGLFEEVAKLGEASVRRIYGDFSGTRLK 52

Query: 59  QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHL 116
            ++               V+A+ A +  +N      K++ D+ L +DA +   S   +  
Sbjct: 53  AWA--------------DVLARHAIKAQQNFAYTSGKNASDIALVIDAMDLLHSGRFDGF 98

Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
            + S D  FT L A ++ +   V              +  R+    F+    L  
Sbjct: 99  CLVSSDSDFTGLAARIREQGLDVYGFGEKK-----TPESFRQACKRFIYTENLLE 148


>gi|254464182|ref|ZP_05077593.1| protein containing DUF88 [Rhodobacterales bacterium Y4I]
 gi|206685090|gb|EDZ45572.1| protein containing DUF88 [Rhodobacterales bacterium Y4I]
          Length = 245

 Score =  102 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 56/177 (31%), Gaps = 28/177 (15%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           +A+ ID  N+  S+K      D         S         Y    G   Q +       
Sbjct: 10  LAVLIDADNI--SAKYAEAMFD------EIASFGEASIRRIYGDFAGGSPQGW------- 54

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDGCF 125
                    +     ++F    G    K++ D+ L +DA +   S   +  V+ S D  F
Sbjct: 55  --NKEKLAALAIVPHQQFANTTG----KNASDIALVIDAMDILHSGRFDGFVLISSDSDF 108

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182
           T L + ++ +   V  +               +    F+ +  L  +  +   + KK
Sbjct: 109 TRLASRIREQGLDVYGMGMRK-----TPAAFVKACKRFIYVENLLEDPGKSKPKAKK 160


>gi|299133322|ref|ZP_07026517.1| protein of unknown function DUF88 [Afipia sp. 1NLS2]
 gi|298593459|gb|EFI53659.1| protein of unknown function DUF88 [Afipia sp. 1NLS2]
          Length = 245

 Score =  102 bits (254), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 48/168 (28%), Gaps = 29/168 (17%)

Query: 6   EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
            + A+ ID  N                L +             Y        + ++ +  
Sbjct: 8   PRFAVLIDADNTSPQIT--------EGLFEEIAKFGEASVRRIYGDFSSSRLKSWADILQ 59

Query: 66  LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDG 123
                     +      ++F    G    K++ D+ L +DA +   S   +   + S D 
Sbjct: 60  ----------RHAIDPYQQFAYTKG----KNASDIALVIDAMDLLHSGRFDGFCLVSSDS 105

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
            FT L + L+ +   V    T         +  R+    F+    L  
Sbjct: 106 DFTRLASRLREQGADVYGFGTQK-----TPESFRQACRRFVYTENLLP 148


>gi|254439173|ref|ZP_05052667.1| conserved hypothetical protein [Octadecabacter antarcticus 307]
 gi|198254619|gb|EDY78933.1| conserved hypothetical protein [Octadecabacter antarcticus 307]
          Length = 233

 Score =  102 bits (254), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 56/171 (32%), Gaps = 29/171 (16%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M D R  +A+ ID  N+   ++          +LK             Y        + +
Sbjct: 1   MSDVRPLLAVLIDADNVP--ARHA------EAILKEISGIGEPALRRVYGDWSSISLKGW 52

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVI 118
           +              +V+ ++     +     + K++ D+ L +DA +       +  VI
Sbjct: 53  T--------------EVIPELGLVARQETANTKQKNASDIGLVIDAMDILHGGKFDGFVI 98

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
            S D  FT L   L+   + V  +             LR   + F+ +  L
Sbjct: 99  VSSDSDFTGLANRLREDGRTVIGIGEAK-----TPQSLRNVCNRFIFIENL 144


>gi|229819539|ref|YP_002881065.1| protein of unknown function DUF88 [Beutenbergia cavernae DSM 12333]
 gi|229565452|gb|ACQ79303.1| protein of unknown function DUF88 [Beutenbergia cavernae DSM 12333]
          Length = 378

 Score =  102 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 37/175 (21%), Positives = 67/175 (38%), Gaps = 23/175 (13%)

Query: 2   FDPREKIALFIDGANLYASSKAL--GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
            D  E++A+F+D  NL   ++    G   D+  +  A   R  V+    Y          
Sbjct: 1   MDADERLAVFLDYENLALGAREHLGGMAFDFGPIADALAVRGRVVVRRAYA--------D 52

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHL 116
           +S        L  +  +++    +           K++ D+++ VDA E +   E +   
Sbjct: 53  WSYFDDDRRALTRHQVELIEMPQRM------GASRKNAADIKMVVDAIEMAFEREYISTF 106

Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
           V+ +GD  F+ LV  L+   K+V  V       +  S  L    D F+    L+ 
Sbjct: 107 VMCTGDSDFSPLVHKLRELNKRVIGV----GVENSTSRLLPPACDEFLFYDRLEG 157


>gi|89894266|ref|YP_517753.1| hypothetical protein DSY1520 [Desulfitobacterium hafniense Y51]
 gi|219668679|ref|YP_002459114.1| hypothetical protein Dhaf_2652 [Desulfitobacterium hafniense DCB-2]
 gi|89333714|dbj|BAE83309.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219538939|gb|ACL20678.1| protein of unknown function DUF88 [Desulfitobacterium hafniense
           DCB-2]
          Length = 253

 Score =  102 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 51/172 (29%), Gaps = 29/172 (16%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            D  + IA+ ID  N+         +   + +L    +  I      Y          + 
Sbjct: 1   MDNDKNIAVLIDADNV--------SEKYIKPILDEVSNHGIPTYKRIYGDWTKPQLSSWK 52

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIF 119
                                ++++   G    K++ D  L +DA +   S+ ++   I 
Sbjct: 53  ----------NVLLNYSITPIQQYSYTTG----KNATDAALIIDAMDILYSKNVDGFCIV 98

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
           S D  FT L A L+     V  +    +             + F  L  L  
Sbjct: 99  SSDSDFTRLAARLREAGMYVIGMGEKKTPTP-----FIAACEKFKYLEVLAG 145


>gi|259486533|tpe|CBF84456.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4]
          Length = 262

 Score =  102 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 25/172 (14%), Positives = 47/172 (27%), Gaps = 30/172 (17%)

Query: 1   MFDPR-EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
           M +     + + +D  N   S+  L        +L        V     Y        + 
Sbjct: 1   MANNTTPNLVVLVDADNAMPSTARL--------ILAEVAKYGTVYVKRAYGDWTSTSLKG 52

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLV 117
           +                   +  ++F    G    K+S D  + +DA +   S       
Sbjct: 53  WKK----------ELLSQSIQPFQQFAYTNG----KNSTDSAMIIDAMDLLYSNRFGGFC 98

Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
           + S D  FT L A ++     V       +     +       + F+    L
Sbjct: 99  LVSSDSDFTRLAARIRESGLTVYGFGEQKTPKPFVA-----ACNKFIYTENL 145


>gi|5441510|emb|CAB46751.1| hypothetical protein [Synechococcus elongatus]
          Length = 142

 Score =  102 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 67/134 (50%), Gaps = 10/134 (7%)

Query: 43  VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC-GRKRVKSSMDVE 101
           ++ A++YT +     +         D L   G+ V  K+ KE+ +   G+   K+++D+E
Sbjct: 11  LVNAFWYTGL-----KDMQDQRSFRDALINLGYTVRTKLLKEYYDESLGKYYQKANLDIE 65

Query: 102 LAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
           + +D F      + +V+FSGDG F   +  L+ K   +T+VST      M + +LR   D
Sbjct: 66  IVIDMFNTVGQYDRVVLFSGDGDFERAIELLRSKNTHITVVST----EGMIARELRNATD 121

Query: 162 YFMDLAYLKNEIAR 175
            ++DL  ++  I +
Sbjct: 122 RYIDLNEIRPFIEK 135


>gi|88703638|ref|ZP_01101354.1| conserved hypothetical protein (DUF88) [Congregibacter litoralis
           KT71]
 gi|88702352|gb|EAQ99455.1| conserved hypothetical protein (DUF88) [Congregibacter litoralis
           KT71]
          Length = 241

 Score =  102 bits (253), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 24/176 (13%), Positives = 51/176 (28%), Gaps = 30/176 (17%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M +  ++IAL ID  N+  ++           +L+       V   + +          +
Sbjct: 1   MSE-TKRIALLIDCDNVTPNA--------IAGVLEELAKHGTVNVRHAHGDWNNPSLSGW 51

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118
                              +  ++F    G    K++ D  + +DA +   S  ++   +
Sbjct: 52  ----------AEKLHPHAIRPMQQFAYTKG----KNATDSAMIIDAMDLLYSGNVDAFAL 97

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
            + D  FT LV  +      V       +               F+ +  L     
Sbjct: 98  MTSDSDFTPLVLRILESGFPVYGFGGKKTPSP-----FVDSCSPFIFIENLIPSKE 148


>gi|227539037|ref|ZP_03969086.1| protein of hypothetical function DUF88 [Sphingobacterium
           spiritivorum ATCC 33300]
 gi|227241093|gb|EEI91108.1| protein of hypothetical function DUF88 [Sphingobacterium
           spiritivorum ATCC 33300]
          Length = 259

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 60/186 (32%), Gaps = 31/186 (16%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M D +  IA+ IDG N  AS          ++L+              Y          +
Sbjct: 1   MNDSKFNIAVLIDGDNAQASL--------IKELIAEVSKYGKATIRRIYGDWTSPQMNSW 52

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVI 118
             +            +      ++F+   G    K+S D  L +DA +    + ++   I
Sbjct: 53  KDILN----------EYSINPIQKFSYTSG----KNSTDSSLIIDAMDILHGKSVDGFCI 98

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL--KNEIARD 176
            S D  +T L   ++ +   V  +        +         + F     L    EIA  
Sbjct: 99  VSSDSDYTGLAKRIREEGLFVMGIG-----RKITPIAFVNSCEIFTFTENLVEVEEIAAV 153

Query: 177 PDEDKK 182
           P ++KK
Sbjct: 154 PADNKK 159


>gi|320353622|ref|YP_004194961.1| hypothetical protein Despr_1516 [Desulfobulbus propionicus DSM
           2032]
 gi|320122124|gb|ADW17670.1| hypothetical protein Despr_1516 [Desulfobulbus propionicus DSM
           2032]
          Length = 356

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 44/164 (26%), Gaps = 29/164 (17%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           +A+ ID  N   S            L+       I      Y          +  +    
Sbjct: 12  LAVLIDADNAQPSVTD--------ALMAEIAKYGIASVKRIYGDWTTPHLVGWKSIV--- 60

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCF 125
                   +   +  ++F    G    K++ D  + +DA +   +       + S D  F
Sbjct: 61  -------LEYSIQPIQQFRYTTG----KNATDSAMIIDAMDLLYTRRFTGFCLVSSDSDF 109

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
           T L + ++ +   V                     D F+    L
Sbjct: 110 TRLASRIREEGFPVYGFGERK-----TPQAFVSACDKFIYTEVL 148


>gi|316935522|ref|YP_004110504.1| hypothetical protein Rpdx1_4219 [Rhodopseudomonas palustris DX-1]
 gi|315603236|gb|ADU45771.1| hypothetical protein Rpdx1_4219 [Rhodopseudomonas palustris DX-1]
          Length = 266

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 50/166 (30%), Gaps = 29/166 (17%)

Query: 6   EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
            ++A+ ID  N  AS+K          L +             Y        + +     
Sbjct: 8   PRLAVLIDADN--ASAKIA------DGLFEEIAKIGEASVRRIYGDFSTQRSKGW----- 54

Query: 66  LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDG 123
                     +      ++F    G    K++ D+ L +DA +   S   +   + S D 
Sbjct: 55  -----ADILAKHAIIPQQQFAYTTG----KNASDITLVIDAMDLLHSGRFDGFCLVSSDS 105

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
            FT L + ++ +   V              +  R+    F+    L
Sbjct: 106 DFTRLASRIREQGVDVFGFGEQK-----TPESFRQACRRFVYTENL 146


>gi|90418798|ref|ZP_01226709.1| conserved hypothetical protein [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90336878|gb|EAS50583.1| conserved hypothetical protein [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 273

 Score =  101 bits (252), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 59/188 (31%), Gaps = 33/188 (17%)

Query: 1   MFDPRE----KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP 56
           M + R     ++A+ ID  N  ASS+          L +             Y       
Sbjct: 1   MSNTRPDRTARLAVLIDADN--ASSRIA------DGLFEEIAKIGEASVRRIYGDFSSSR 52

Query: 57  EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLE 114
            + ++ +            +      ++F    G    K++ D+ L +DA +   S   +
Sbjct: 53  SKGWADVLS----------RHAIIPQQQFAYTTG----KNASDITLVIDAMDLLHSGRFD 98

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
              + S D  FT L A ++ +   V              +  R+    F+    L  +  
Sbjct: 99  GFCLVSSDSDFTRLAARIREQGVDVYGFGEQK-----TPESFRQACRRFIYTENLLPQRI 153

Query: 175 RDPDEDKK 182
               +D K
Sbjct: 154 APEKDDGK 161


>gi|332184991|ref|ZP_08386740.1| hypothetical protein SUS17_244 [Sphingomonas sp. S17]
 gi|332014715|gb|EGI56771.1| hypothetical protein SUS17_244 [Sphingomonas sp. S17]
          Length = 258

 Score =  101 bits (251), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 58/183 (31%), Gaps = 30/183 (16%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M      IAL ID  N  +++           +L        V     Y        + +
Sbjct: 1   MNALTRNIALLIDADNAQSAA--------IDPVLTVLAELGTVNVRRAYGNWSKPGLKGW 52

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVI 118
                           V+ K   E  +     + K++ D+++ +DA +      ++   I
Sbjct: 53  R--------------DVMVKHGIEPQQQFDLTKGKNATDMKMTIDAMDLLFRGRIDGFGI 98

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD-P 177
            S D  F  L   +++    V          S   +  ++    F+D+  L NE  R  P
Sbjct: 99  MSSDSDFMPLATRIRQDGFPVYGFG-----NSRTPEAFKQACSRFIDVGALINEAPRPMP 153

Query: 178 DED 180
            + 
Sbjct: 154 SKP 156


>gi|158314589|ref|YP_001507097.1| hypothetical protein Franean1_2768 [Frankia sp. EAN1pec]
 gi|158109994|gb|ABW12191.1| protein of unknown function DUF88 [Frankia sp. EAN1pec]
          Length = 272

 Score =  101 bits (251), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 45/165 (27%), Gaps = 29/165 (17%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           ++A+ ID  N  AS            +L              Y        + +      
Sbjct: 10  RLAVLIDADNAQASL--------VEHVLAEVAMFGTAHVKRAYGDWTSTHLRSWKDQL-- 59

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124
                        +  ++F    G    K++ D  + +DA +      L+   + S D  
Sbjct: 60  --------LAHSIQPIQQFAHTSG----KNATDAAMVIDAMDLLYGAELDGFCLISSDSD 107

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
           FT L + L+   + V                     D F  +  L
Sbjct: 108 FTRLASRLRESGRIVYGFGERK-----TPRSFVAACDTFTYVENL 147


>gi|116626906|ref|YP_829062.1| hypothetical protein Acid_7883 [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116230068|gb|ABJ88777.1| protein of unknown function DUF88 [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 451

 Score =  101 bits (251), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 38/178 (21%), Positives = 72/178 (40%), Gaps = 23/178 (12%)

Query: 2   FDPREKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
            + + KIA+FID  N+    K+ L  + D   +L A + R  ++  + Y          +
Sbjct: 1   MEQKLKIAVFIDFDNIEIGVKSTLHREFDVAAVLDALKERGEIVTKFAYAN--------W 52

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLV 117
                    L  +  Q+V +      +       K+  D+ LA+DA E +   + +    
Sbjct: 53  GRQESATRALSEHAVQMVQRDPSPRGD-------KNGADINLALDALEMAFTHDHINAFA 105

Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
           I SGD  F  LV  L++  K++ +V       +  S  L++    F+    + ++  R
Sbjct: 106 IVSGDSDFIALVNKLKQYDKRIFVV----GGRAFTSTILQKNCHEFVAYESVMDDKPR 159


>gi|312198295|ref|YP_004018356.1| hypothetical protein FraEuI1c_4493 [Frankia sp. EuI1c]
 gi|311229631|gb|ADP82486.1| hypothetical protein FraEuI1c_4493 [Frankia sp. EuI1c]
          Length = 314

 Score =  101 bits (251), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 47/167 (28%), Gaps = 28/167 (16%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           ++A+ ID  N   ++           LL              Y        + +      
Sbjct: 9   RLAVLIDAENAPLAA--------VEPLLAQIGRFGRAQVKRAYGDWTVASLKSWKKTL-- 58

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGC 124
                     +  +  + F    G    K++ D+ L ++A +       +   + S D  
Sbjct: 59  --------LDLSIRPVQVFAAVRG----KNASDMALVIEAMDLLHSGAFDGFCLVSSDSD 106

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
           FT L   ++     V             +  L    D F+ +  L +
Sbjct: 107 FTRLAERIREAGLTVYGFGE----ERKTNPGLVAACDTFIFVETLID 149


>gi|227329498|ref|ZP_03833522.1| hypothetical protein PcarcW_19989 [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 241

 Score =  101 bits (251), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 35/183 (19%), Positives = 60/183 (32%), Gaps = 33/183 (18%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M D  EKIA+FID  N      A    ID  K+L       +V     Y        + +
Sbjct: 1   MKDK-EKIAVFIDADN------APAKKID--KVLSELARYGVVNIRKAYGNWKNQNLKAW 51

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVI 118
                          +   +  ++F    G    K++ D+ LA+D  +   ++ ++ + +
Sbjct: 52  ----------EDVLHEFAIQPIQQFDLTKG----KNATDMALAIDVMDVLYTKNVDVICL 97

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY---LKNEIAR 175
            S D  FT LV       K V       +               F+ L     ++  I +
Sbjct: 98  VSSDCDFTPLVTRALADGKFVIGFGERKAP-----VAFVNSCSRFLYLDDEIGIEQPIQK 152

Query: 176 DPD 178
              
Sbjct: 153 QSR 155


>gi|192292848|ref|YP_001993453.1| hypothetical protein Rpal_4482 [Rhodopseudomonas palustris TIE-1]
 gi|192286597|gb|ACF02978.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1]
          Length = 267

 Score =  100 bits (250), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 50/170 (29%), Gaps = 29/170 (17%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
                ++A+ ID  N  AS+K          L +             Y        + + 
Sbjct: 4   EHRSPRLAVLIDADN--ASAKIA------DGLFEEIAKIGEASVRRIYGDFSTPRSKGW- 54

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIF 119
                         +      ++F    G    K++ D+ L +DA +   S   E   + 
Sbjct: 55  ---------ADILAKHAIIPQQQFAYTTG----KNASDITLVIDAMDLLHSGRFEGFCLV 101

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
           S D  FT L + ++ +   V              +  R+    F+    L
Sbjct: 102 SSDSDFTRLASRIREQGVDVFGFGEQK-----TPESFRQACRRFVYTENL 146


>gi|295109365|emb|CBL23318.1| Uncharacterized conserved protein [Ruminococcus obeum A2-162]
          Length = 255

 Score =  100 bits (250), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 52/166 (31%), Gaps = 29/166 (17%)

Query: 6   EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
           + IA+ ID  N   S            +++   +   ++    Y        + +     
Sbjct: 5   KNIAMLIDADNTQLS--------KLESVIQEISTNGRIVVKRAYGNWRKGSLKNW----- 51

Query: 66  LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDG 123
                     ++  K  ++F    G    K++ D+ L +D  +       +  VI + D 
Sbjct: 52  -----ENELKRLAIKAEQQFDYVAG----KNATDMALVIDTLDLLHSGIYDAFVIVASDS 102

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
            +T L   L+     V  V    +         R   D F+ L  L
Sbjct: 103 DYTPLAIKLRESGVFVMGVGEKKTPEP-----FRNACDEFVYLENL 143


>gi|52425038|ref|YP_088175.1| hypothetical protein MS0983 [Mannheimia succiniciproducens MBEL55E]
 gi|52307090|gb|AAU37590.1| unknown [Mannheimia succiniciproducens MBEL55E]
          Length = 274

 Score =  100 bits (250), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 51/168 (30%), Gaps = 30/168 (17%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           +A+ ID  N  A +         + +L+             Y   VGD  +         
Sbjct: 18  LAVLIDADNASAQT--------IKAILEETTKFGEATVKRIYGNFVGDSGK--------- 60

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCF 125
                   +   K  ++F    G    K++ D  + +DA +   +   +   I S D  F
Sbjct: 61  --WKAVINEYAIKPMQQFAYTKG----KNATDGFMIIDAMDLLYTNRFDGFCIVSSDSDF 114

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
           T L   L+ +   V              +        F+ +  L  E+
Sbjct: 115 TALAIRLKEQGVTVYGFG-----KKQTPEAFLNACSQFIYVENLLPEL 157


>gi|39937021|ref|NP_949297.1| hypothetical protein RPA3960 [Rhodopseudomonas palustris CGA009]
 gi|39650878|emb|CAE29401.1| conserved unknown protein [Rhodopseudomonas palustris CGA009]
          Length = 267

 Score =  100 bits (250), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 50/170 (29%), Gaps = 29/170 (17%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
                ++A+ ID  N  AS+K          L +             Y        + + 
Sbjct: 4   EHRSPRLAVLIDADN--ASAKIA------DGLFEEIAKIGEASVRRIYGDFSTPRSKGW- 54

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIF 119
                         +      ++F    G    K++ D+ L +DA +   S   E   + 
Sbjct: 55  ---------ADILAKHAIIPQQQFAYTTG----KNASDITLVIDAMDLLHSGRFEGFCLV 101

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
           S D  FT L + ++ +   V              +  R+    F+    L
Sbjct: 102 SSDSDFTRLASRIREQGVDVFGFGEQK-----TPESFRQACRRFVYTENL 146


>gi|241554076|ref|YP_002979289.1| protein of unknown function DUF88 [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240863382|gb|ACS61044.1| protein of unknown function DUF88 [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 262

 Score =  100 bits (250), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 49/171 (28%), Gaps = 29/171 (16%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M    + +AL IDG N  AS K +        LL    +         Y          +
Sbjct: 1   MTGTSDTLALLIDGDN--ASPKIVS------GLLAEIATYGTASVRRIYGDWTKPNLNGW 52

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118
                          +   +  ++F    G    K++ D  + +DA +   +       I
Sbjct: 53  K----------ECLLEHSIQPVQQFAYTTG----KNATDGAMIIDAMDLLYTGRFSAFCI 98

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
            S D  F  L + ++ +   V       +             D F+    L
Sbjct: 99  VSSDSDFARLASRIREQGVTVYGFGERKTPRP-----FITACDKFVYFDVL 144


>gi|254507560|ref|ZP_05119693.1| protein containing DUF88 [Vibrio parahaemolyticus 16]
 gi|219549447|gb|EED26439.1| protein containing DUF88 [Vibrio parahaemolyticus 16]
          Length = 240

 Score =  100 bits (250), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 61/177 (34%), Gaps = 29/177 (16%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
             KIA+ ID  N   S   L        +++   S   +I    Y     +  + +    
Sbjct: 3   NRKIAVLIDSENTPHSKLNL--------IIEELSSFGQIIVKRAYGDFSAEQLKNWKQPL 54

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122
                      ++  +  ++F    G    K+S D  + +DA +   S+  +   + S D
Sbjct: 55  N----------ELAIQAKQQFAYTSG----KNSTDSLMIIDAMDLLYSQRFDAFALISSD 100

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
             FT+L   L+     V  V       +M     +   D F+ +  L  ++  +  +
Sbjct: 101 SDFTSLATRLRESEIHVIGVG-----KAMTPTSFKNACDDFVAIENLNADVDLEQAQ 152


>gi|329118512|ref|ZP_08247216.1| hypothetical protein HMPREF9123_0644 [Neisseria bacilliformis ATCC
           BAA-1200]
 gi|327465247|gb|EGF11528.1| hypothetical protein HMPREF9123_0644 [Neisseria bacilliformis ATCC
           BAA-1200]
          Length = 264

 Score =  100 bits (250), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 59/175 (33%), Gaps = 30/175 (17%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           ++A+ ID  N  AS++      D   +L              Y   VGD  Q    ++  
Sbjct: 17  RLAVLIDADN--ASAR------DIAAILDEVTKFGDATVKRTYGNFVGDNGQWKQVINDY 68

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124
                        K  ++F    G    K++ D  + +DA +   S+ L+   I S D  
Sbjct: 69  -----------AIKPMQQFAFTTG----KNATDGFMIIDAMDLLYSDRLDGFCIVSSDSD 113

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
           FT L   L+ +   V                       F+ +  L +E  ++ ++
Sbjct: 114 FTALAIRLKEQGMPVYGFG-----RKQTPKAFINACTQFIYVENLISEEIKNDNK 163


>gi|307824274|ref|ZP_07654500.1| protein of unknown function DUF88 [Methylobacter tundripaludum
           SV96]
 gi|307734654|gb|EFO05505.1| protein of unknown function DUF88 [Methylobacter tundripaludum
           SV96]
          Length = 276

 Score =  100 bits (249), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 56/182 (30%), Gaps = 30/182 (16%)

Query: 3   DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
           +  ++ AL ID  N  A +           +L        V     Y          +  
Sbjct: 4   NENKRFALLIDADNAQAKA--------IDAILTEAARYGDVTSRRCYGDWTHTRLGSWKS 55

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFS 120
           +            +   +  ++F    G    K++ D  L +DA +   +       + S
Sbjct: 56  VLN----------KHAIQPMQQFAYTSG----KNATDSALIIDAMDLLYTGKFNGFFLVS 101

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
            D  FT L   L+    +V  +        +  +  R   + F+    + ++     DE 
Sbjct: 102 SDSDFTKLATRLREAGLEVIGIG-----KRLTPEAFRAACNKFIFTETIMDD-ENSADEI 155

Query: 181 KK 182
           KK
Sbjct: 156 KK 157


>gi|317145182|ref|XP_001820499.2| hypothetical protein AOR_1_2934154 [Aspergillus oryzae RIB40]
          Length = 258

 Score =  100 bits (249), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 47/166 (28%), Gaps = 29/166 (17%)

Query: 6   EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
            K+ + ID  N  +S       +D   LL              Y        Q +     
Sbjct: 7   PKLVVLIDADNARSSV------VDP--LLSEIAKYGTAHAKRAYGDWTRTNLQGWKDQL- 57

Query: 66  LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDG 123
                     +   +  ++F    G    K++ D  + +DA +   S   +   + S D 
Sbjct: 58  ---------LKQSIQPIQQFAYTHG----KNATDSAMIIDAMDLLYSSRYDGFCLVSSDS 104

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
            FT L A ++     V       +     +         F+    L
Sbjct: 105 DFTRLAARIRESGLIVYGFGENHTPKPFVA-----ACSKFIYTENL 145


>gi|238917756|ref|YP_002931273.1| hypothetical protein EUBELI_01837 [Eubacterium eligens ATCC 27750]
 gi|238873116|gb|ACR72826.1| Hypothetical protein EUBELI_01837 [Eubacterium eligens ATCC 27750]
          Length = 318

 Score =  100 bits (249), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 57/170 (33%), Gaps = 29/170 (17%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
            ++ A+ ID  N+  SSK          +L       ++     Y         ++    
Sbjct: 3   DKRYAVLIDSDNI--SSKY------ISNILDEMTKYGVITYKRIYGDWTSPQAGKWKKEL 54

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGD 122
                      +      ++F    G    K++ D  L +DA +   ++ ++   I S D
Sbjct: 55  M----------ENSITPIQQFRNTVG----KNATDSTLIIDAMDILYTKNVDGFCIVSSD 100

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
           G FT L + L+    +V  +              R     F DL  L+++
Sbjct: 101 GDFTRLASRLRESGMEVIGMGENK-----TPRSFRAACSVFTDLELLQDQ 145


>gi|229825159|ref|ZP_04451228.1| hypothetical protein GCWU000182_00510 [Abiotrophia defectiva ATCC
           49176]
 gi|229790531|gb|EEP26645.1| hypothetical protein GCWU000182_00510 [Abiotrophia defectiva ATCC
           49176]
          Length = 249

 Score =  100 bits (249), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 50/170 (29%), Gaps = 29/170 (17%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            +  ++I + ID  N                ++    +   ++    Y     D  + + 
Sbjct: 1   MENLKRIVMLIDADNTQIG--------KLEDVIGEISTHGRIVVKRAYGNWRKDVLKNW- 51

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIF 119
                         ++  K  ++F    G    K++ D+ L +D          +  VI 
Sbjct: 52  ---------EKELKRLAIKAEQQFDYVNG----KNATDMALVIDTMNLLHKGIYDCFVIV 98

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
           + D  +T L   L      V  V           +  R   D F+ L  L
Sbjct: 99  ASDSDYTPLAINLHESGVYVIGVGEKK-----TPEAFRNSCDEFIFLENL 143


>gi|225175633|ref|ZP_03729627.1| conserved hypothetical protein [Dethiobacter alkaliphilus AHT 1]
 gi|225168962|gb|EEG77762.1| conserved hypothetical protein [Dethiobacter alkaliphilus AHT 1]
          Length = 246

 Score =  100 bits (249), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 51/171 (29%), Gaps = 29/171 (16%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            +   KIA+ ID  N+  S K + +  D         +         Y          + 
Sbjct: 1   MENDRKIAVLIDADNV--SEKYIKYIFD------EISNHGTPTYKRIYGDWTKPQLTPWK 52

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIF 119
                                ++++   G    K++ D  L +DA +   SE ++   I 
Sbjct: 53  ----------NVLLNYSITPIQQYSYTTG----KNATDAALIIDAMDILYSENVDGFCIV 98

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
           S D  FT L A L+     V  +    +             + F  L  L 
Sbjct: 99  SSDSDFTKLAARLREAGMYVIGMGEKKTPTP-----FIAACEKFKYLEVLA 144


>gi|320162088|ref|YP_004175313.1| hypothetical protein ANT_26870 [Anaerolinea thermophila UNI-1]
 gi|319995942|dbj|BAJ64713.1| hypothetical protein ANT_26870 [Anaerolinea thermophila UNI-1]
          Length = 271

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 53/178 (29%), Gaps = 29/178 (16%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           +IA+ IDG N   S            +L        VI    Y          +  +   
Sbjct: 12  RIAMLIDGDNAQPSL--------IGDMLAETSKYGTVIIRRIYGDWTTANMNGWKEVLQ- 62

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDGC 124
                        +  ++F    G    K++ D  + +DA +    + +E   + S D  
Sbjct: 63  ---------TYAIQPIQQFRYTIG----KNATDSAMIIDAMDILYEDRVEGFCLVSSDSD 109

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182
           +T L   ++ K   V  +       S          D F+    L+ +    P    +
Sbjct: 110 YTRLATRIREKGIFVMGIG-----KSTTPRAFVNACDVFVFTENLQKKNLPAPKPRPQ 162


>gi|225568810|ref|ZP_03777835.1| hypothetical protein CLOHYLEM_04889 [Clostridium hylemonae DSM
           15053]
 gi|225162309|gb|EEG74928.1| hypothetical protein CLOHYLEM_04889 [Clostridium hylemonae DSM
           15053]
          Length = 313

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 54/166 (32%), Gaps = 29/166 (17%)

Query: 9   ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68
           AL ID  N+  S+K        + +L        +     Y         ++        
Sbjct: 7   ALLIDADNI--SAKY------IKPILTELSKYGNITYKRIYGDWTSTQHSKWK------- 51

Query: 69  WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDGCFT 126
                         ++F+   G    K++ D  + +DA +   +  +    I S D  FT
Sbjct: 52  ---DELLTNSITPIQQFSYTQG----KNATDSAMIIDAMDILYTNDVHGFCIVSSDSDFT 104

Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
            LV+ L+   K V  +    +         R+  D F  L  L NE
Sbjct: 105 RLVSRLRESGKLVIGMGENKTPEP-----FRKACDKFTILENLLNE 145


>gi|110833552|ref|YP_692411.1| hypothetical protein ABO_0691 [Alcanivorax borkumensis SK2]
 gi|110646663|emb|CAL16139.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
          Length = 252

 Score =  100 bits (249), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 28/178 (15%), Positives = 55/178 (30%), Gaps = 31/178 (17%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           +A+ ID  N           +D   L +             Y          +       
Sbjct: 18  LAVLIDADN------TPPKIVD--GLFEEIAKFGTASVKRIYGDWTKPNLGGWKS----- 64

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCF 125
                    V+ K + +  +     + K++ D  + +DA +   S+ L    + S D  F
Sbjct: 65  ---------VLLKHSIQPIQQFAYTQGKNATDCSMIIDAMDLLYSKQLSGFCLVSSDSDF 115

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE--IARDPDEDK 181
           T L A L+ +   V       +     +       D F+    L+++      PD+ +
Sbjct: 116 TRLAARLREEGLTVYGFGERKTPGPFVA-----ACDKFIYTEVLRSDHAPQHTPDKPQ 168


>gi|269925423|ref|YP_003322046.1| protein of unknown function DUF88 [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269789083|gb|ACZ41224.1| protein of unknown function DUF88 [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 408

 Score =  100 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/184 (23%), Positives = 75/184 (40%), Gaps = 21/184 (11%)

Query: 8   IALFIDGANLYASSKALGFDI-DYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           +AL+ID  N+  S       + +   L +A      V+ A  Y         Q       
Sbjct: 20  VALYIDWENIKYSLWNKDSRVPNATALKEAASKFGRVVVARAYANW------QEHQHQLD 73

Query: 67  LDWLHYNGFQVVAKVAKEFTENCG---RKRVKSSMDVELAVDAFEQS---EGLEHLVIFS 120
            + L+  G + +    + +T         R K+S+DV+L VDA +       +   V+ +
Sbjct: 74  PNDLYSAGIEPIYVPTRTYTSTDAVKTNNRRKNSVDVKLTVDAVDFCLSNPNIHTFVLVT 133

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY----LKNEIARD 176
           GDG F  LV AL+ + ++V ++          S QL   ADYF+        + +++  D
Sbjct: 134 GDGDFIHLVNALRSRGREVVVIGCS----WSTSWQLTSMADYFIPYDIEVDPIYDKVGED 189

Query: 177 PDED 180
             ED
Sbjct: 190 NTED 193


>gi|329847705|ref|ZP_08262733.1| hypothetical protein ABI_07730 [Asticcacaulis biprosthecum C19]
 gi|328842768|gb|EGF92337.1| hypothetical protein ABI_07730 [Asticcacaulis biprosthecum C19]
          Length = 145

 Score =  100 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 52/162 (32%), Gaps = 31/162 (19%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           K+AL +DG N+               L K   +  +      Y      P+         
Sbjct: 4   KLALLVDGDNIGHQL--------IAPLWKQVVTLGMPNVQRVYRDWSRGPD--------- 46

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGC 124
                    +   +   +F    G    K++ D+ + +DA + ++    +   + S D  
Sbjct: 47  ---WKDVLLKYALQPMHQFNYAPG----KNATDIAMVIDALDLAQTGLYDGFCLASSDSD 99

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
           FT L   L+++  KV                 ++  D F+ L
Sbjct: 100 FTPLAIRLRQRGLKVYGFGETK-----TPATFQQACDRFIIL 136


>gi|84515798|ref|ZP_01003159.1| hypothetical protein SKA53_14151 [Loktanella vestfoldensis SKA53]
 gi|84510240|gb|EAQ06696.1| hypothetical protein SKA53_14151 [Loktanella vestfoldensis SKA53]
          Length = 246

 Score =  100 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 56/179 (31%), Gaps = 29/179 (16%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M   R  +A+ ID  N+   +K  G       +L+   +         Y          +
Sbjct: 1   MAKDRMLLAVLIDADNIP--AKYAG------PILREVTTYGEPALRRVYGDWSSPALGGW 52

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVI 118
                            V  +     +     R K++ D+ L +DA +   S   +  V+
Sbjct: 53  KKE--------------VVDLGLVANQETANTRGKNASDIGLVIDAMDILHSGRFDGFVL 98

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
            S D  FT L   L+     V  +    +        LR   + F+ +  L ++    P
Sbjct: 99  VSSDSDFTALANRLRENGVVVIGIGEGKAP-----VSLRNVCNRFILIENLVDQEKEQP 152


>gi|219848822|ref|YP_002463255.1| hypothetical protein Cagg_1924 [Chloroflexus aggregans DSM 9485]
 gi|219543081|gb|ACL24819.1| protein of unknown function DUF88 [Chloroflexus aggregans DSM 9485]
          Length = 334

 Score =  100 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 59/164 (35%), Gaps = 29/164 (17%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           +IAL IDG N  A+           ++++    + I++    Y           S     
Sbjct: 24  RIALLIDGENCAATYAD--------QVMEMADKQGILVTRRVYANWSV------SAHQKW 69

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGC 124
           ++ +     + +           G    KS++D+ L +DA +       +   + +GDG 
Sbjct: 70  IEAVARYDLRPI--------YYAGIAPGKSTIDMVLTIDAMDLHYRQVCDDFCLVTGDGD 121

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
           +  LV  L+     V ++ T        +  L+     F+ LA 
Sbjct: 122 YAPLVKRLRAGGANVIVIGTEQ-----TATVLKEVCSTFIPLAK 160


>gi|89052539|ref|YP_507990.1| hypothetical protein Jann_0048 [Jannaschia sp. CCS1]
 gi|88862088|gb|ABD52965.1| protein of unknown function DUF88 [Jannaschia sp. CCS1]
          Length = 239

 Score =  100 bits (248), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 23/177 (12%), Positives = 53/177 (29%), Gaps = 29/177 (16%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M +    +A+ ID  N              + + +             Y        + +
Sbjct: 1   MANDTPLLAVLIDADNTSH--------KHAQAIFEEIARFGEASVRRIYGDFSSTHMKGW 52

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVI 118
           S +            +       +     G    K++ D+ L +DA +   S   +  V+
Sbjct: 53  SGVQA----------EYGIVPFHQPANTVG----KNASDIALVIDAMDVLHSGRFDGFVL 98

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
            S D  FT L + ++ +   V  +           +  R+    F+ +  +  +  +
Sbjct: 99  VSSDSDFTRLASRIREQGLDVYGIGQQK-----TPEAFRKACKRFIFIENILPDQPK 150


>gi|169611408|ref|XP_001799122.1| hypothetical protein SNOG_08816 [Phaeosphaeria nodorum SN15]
 gi|111062864|gb|EAT83984.1| hypothetical protein SNOG_08816 [Phaeosphaeria nodorum SN15]
          Length = 277

 Score = 99.7 bits (247), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 44/177 (24%), Gaps = 29/177 (16%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           +AL ID  N+ A             L+    +         Y          +       
Sbjct: 7   LALLIDADNVSAKI--------IVGLMAEIANYGTASVRRIYGDWTSPALGPWKA----- 53

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCF 125
                          ++F    G    K++ D  + +DA +   +       I S D  F
Sbjct: 54  -----CLLNHSITPIQQFAYTSG----KNATDGAMIIDAMDLLYTGRYTAFCIVSSDSDF 104

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182
           T L + ++ +   V                     + F     L          D++
Sbjct: 105 TRLASRIREQAVTVYGFGERK-----TPHAFVAACNKFTYFDVLNMTFEEPATADRQ 156


>gi|311747812|ref|ZP_07721597.1| hypothetical protein ALPR1_15829 [Algoriphagus sp. PR1]
 gi|126575803|gb|EAZ80113.1| hypothetical protein ALPR1_15829 [Algoriphagus sp. PR1]
          Length = 256

 Score = 99.7 bits (247), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 61/184 (33%), Gaps = 29/184 (15%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M D +  IA+ IDG N  AS+K        +++L+             Y          +
Sbjct: 1   MRDNKFNIAVLIDGDN--ASAKL------IKEILEEVSKYGKATIRRIYGDWTTPQMNSW 52

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVI 118
             +  L  +             ++F+   G    K+S D  L +DA +   S  ++   I
Sbjct: 53  KEMINLHSFS----------PIQKFSYTTG----KNSTDSSLIIDAMDILHSSSVDGFCI 98

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
            S D  +T L   ++ +   V  +        +      +  + F     L  +   +  
Sbjct: 99  VSSDSDYTGLAKRIREEGMFVMGIG-----RRITPKAFVQSCEIFTFAENLGPDTDEEKS 153

Query: 179 EDKK 182
            + K
Sbjct: 154 TETK 157


>gi|257453692|ref|ZP_05618979.1| protein containing DUF88 [Enhydrobacter aerosaccus SK60]
 gi|257448926|gb|EEV23882.1| protein containing DUF88 [Enhydrobacter aerosaccus SK60]
          Length = 267

 Score = 99.7 bits (247), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 51/167 (30%), Gaps = 29/167 (17%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           ++A+ ID  N  AS   L        LL    +  I      Y          +      
Sbjct: 14  RLAVLIDADN--ASVNHL------DALLSEIATLGISSVRRAYGDWTRPQLNSWK----- 60

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124
                        +  ++F+   G    K++ D  L +DA +   +E  +   + S D  
Sbjct: 61  -----NVLLSYSIQPIQQFSYTTG----KNATDASLIIDAMDLLYTERFDGFCLVSSDSD 111

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
           FT L   ++ +   V          S       +  D F  L + + 
Sbjct: 112 FTRLAQRIREQGLLVYGFG-----RSTTPKPFVQACDRFTYLEFFEE 153


>gi|254413548|ref|ZP_05027318.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
           7420]
 gi|196179655|gb|EDX74649.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
           7420]
          Length = 399

 Score = 99.7 bits (247), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 38/166 (22%), Positives = 62/166 (37%), Gaps = 25/166 (15%)

Query: 6   EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
           EK+A+F+D  NL    K  G       LL+       V+    Y            P   
Sbjct: 3   EKVAIFLDVENLSGWLKVDGG----EALLERANELGRVVVRRAYGDFSIASVSVRQPELN 58

Query: 66  LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGL---EHLVIFSGD 122
           LL      GF+        F       + K+S D+++ VD  E    +   E +V+ +GD
Sbjct: 59  LL------GFE--------FVHVYHPVKGKNSADIQIVVDVMEYLARIPDLEWVVLATGD 104

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
             F+ L   L+   K V  V       S  S+ +++  + F+ +  
Sbjct: 105 SDFSPLFRRLRELGKSVVGV----GPRSALSEAVKKSCNRFIYIDE 146


>gi|330984094|gb|EGH82197.1| hypothetical protein PLA107_03594 [Pseudomonas syringae pv.
           lachrymans str. M301315]
          Length = 282

 Score = 99.3 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 46/162 (28%), Positives = 80/162 (49%), Gaps = 14/162 (8%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA-IVIRAYYYT----TVVGDPEQQ 59
            E++ ++ID AN+ A+    GF++DY  L +         +    Y+             
Sbjct: 3   MERVGVYIDQANVNANQ---GFEMDYSVLREFALRGGARGVHLNVYSSTNPAKAERDPAW 59

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119
            S L      +   G+ +  K AKE+ E   R  VK++ DV++AVD  E +  L+ +++ 
Sbjct: 60  HSRLKAYQSQIRSMGYHINLKEAKEYGEG-DRLVVKANADVDIAVDVLESASKLDRILLV 118

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
           SGDG F++LVAA +R+  +V +++         S+QLR  +D
Sbjct: 119 SGDGDFSSLVAAARRQGARVEVLAFD-----HCSEQLRGASD 155


>gi|212637199|ref|YP_002313724.1| hypothetical protein swp_4494 [Shewanella piezotolerans WP3]
 gi|212558683|gb|ACJ31137.1| Conserved hypothetical protein [Shewanella piezotolerans WP3]
          Length = 245

 Score = 99.3 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 61/184 (33%), Gaps = 30/184 (16%)

Query: 1   MFDP-REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
           M    +EKIALFID  N  A+       +D   +L       +V     Y        + 
Sbjct: 1   MLMKDKEKIALFIDADNAPAA------KVD--VILSELAKYGVVNIRRAYGNWKSSNIKP 52

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLV 117
           +               +   +  ++F    G    K++ D+ L +DA +   ++ ++ + 
Sbjct: 53  W----------EDVLHEYAIQPIQQFDLTKG----KNATDIALVIDAMDILYTKDVDIIC 98

Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
           + S D  FT LV       K +       +               F+ L   +  +   P
Sbjct: 99  LVSSDCDFTPLVTRALADGKFLIGFGERKAP-----SAFVNSCSRFLYLDEYEQSVEGLP 153

Query: 178 DEDK 181
             DK
Sbjct: 154 KFDK 157


>gi|259419136|ref|ZP_05743053.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
 gi|259345358|gb|EEW57212.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
          Length = 258

 Score = 99.3 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 57/177 (32%), Gaps = 30/177 (16%)

Query: 1   MFDPRE--KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58
           M +  +   +A+ ID  N+  S+K            +   S         Y    G   Q
Sbjct: 1   MANSEKPPLLAVLIDADNI--SAKHAEVMF------EEIASLGEASIRRIYGDFSGGGPQ 52

Query: 59  QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHL 116
            +S                     ++F    G    K++ D+ L +DA +   S   +  
Sbjct: 53  GWSKDKLAAYA---------IVPHQQFANTTG----KNASDIALVIDAMDILHSGRFDGF 99

Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
           V+ S D  FT L + ++ +   V  +               R    F+ +  L NE+
Sbjct: 100 VLISSDSDFTRLASRIREQGLDVYGMGMRK-----TPAAFVRACKRFIYVENLLNEV 151


>gi|149915348|ref|ZP_01903875.1| predicted S-transferase [Roseobacter sp. AzwK-3b]
 gi|149810637|gb|EDM70478.1| predicted S-transferase [Roseobacter sp. AzwK-3b]
          Length = 232

 Score = 99.3 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 57/182 (31%), Gaps = 29/182 (15%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M D    +A+ ID  N      +  +    R + +   +         Y          +
Sbjct: 1   MPDRTPLLAVLIDADNT-----SPKWT---RAIFEEIAAIGEASVRRCYGDFSSQQMSGW 52

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVI 118
           + +            +       +     G    K++ D+ L +DA +       +  V+
Sbjct: 53  NKVQA----------EFGLVPHHQPANTVG----KNASDIALVIDAMDLMHSGRFDGFVL 98

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
            S D  FT L + ++ +  +V  +           +  R+    F+ L  L  E A  P 
Sbjct: 99  VSSDSDFTRLASRIREQGLEVYGIGARK-----TPEAFRKACKRFIYLENLGTEGAETPA 153

Query: 179 ED 180
            +
Sbjct: 154 PN 155


>gi|92115812|ref|YP_575541.1| hypothetical protein Nham_0180 [Nitrobacter hamburgensis X14]
 gi|91798706|gb|ABE61081.1| protein of unknown function DUF88 [Nitrobacter hamburgensis X14]
          Length = 254

 Score = 99.3 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 57/174 (32%), Gaps = 29/174 (16%)

Query: 6   EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
            + A+ ID  N+  SSK          L K             Y  + G   + ++    
Sbjct: 10  PRFAILIDAENV--SSKFA------DGLFKKIAQMGDAPVRLIYGNLSGPNLKGWAS--- 58

Query: 66  LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGDG 123
                      V+   + E  +     + K+S D+ L +DA +      +    + S D 
Sbjct: 59  -----------VLPDHSLERRDQIRAAKGKNSADMALVIDAMDLLHDGRINGFCLVSSDS 107

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
            FT L A L+R+   V              D  +R  D F+ L  L  + +   
Sbjct: 108 DFTNLAARLRREGASVYGFGEKK-----TPDCFQRACDRFISLEGLLPKTSEPK 156


>gi|189210104|ref|XP_001941384.1| conserved hypothetical protein [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187977477|gb|EDU44103.1| conserved hypothetical protein [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 260

 Score = 99.3 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 48/183 (26%), Gaps = 29/183 (15%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M      +AL IDG N+               L+    +         Y          +
Sbjct: 1   MPINDSSLALLIDGDNVSPKI--------IAGLMAEVANYGTASVRRIYGDWTSPYLNGW 52

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118
                                 ++F    G    K+  D  + +DA +   +  L    +
Sbjct: 53  KA----------CLLHHSITPIQQFAYTTG----KNVTDGAMIIDAMDLLYTGRLSSFCL 98

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
            S D  FT L A ++ +   V             ++      D FM    L  E     +
Sbjct: 99  VSSDSDFTRLAARIREQGVTVYGFGERK-----TNNAFIAACDKFMYFDVLSVESQELEE 153

Query: 179 EDK 181
             +
Sbjct: 154 PSR 156


>gi|329888562|ref|ZP_08267160.1| hypothetical protein BDIM_04870 [Brevundimonas diminuta ATCC 11568]
 gi|328847118|gb|EGF96680.1| hypothetical protein BDIM_04870 [Brevundimonas diminuta ATCC 11568]
          Length = 246

 Score = 99.3 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 55/169 (32%), Gaps = 29/169 (17%)

Query: 6   EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
            ++A+ IDG N  AS++          L     +         Y        + +     
Sbjct: 13  PRLAVLIDGEN--ASARIA------EALFTEIATLGEASARRIYGDAASPALRGW----- 59

Query: 66  LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDG 123
                      V+ + A ++ +N    + K+S D+ L +DA +   S   +   + S D 
Sbjct: 60  ---------IDVLPRWAIQWQQNFQNTKGKNSGDIALVIDAMDLLHSGRFDGFCLVSSDS 110

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
            FT L A ++ +   V              +  R+    F+    L   
Sbjct: 111 DFTRLAARIREQGVPVYGFGERK-----TPESFRQACTRFIYTENLTGR 154


>gi|237808074|ref|YP_002892514.1| hypothetical protein Tola_1311 [Tolumonas auensis DSM 9187]
 gi|237500335|gb|ACQ92928.1| protein of unknown function DUF88 [Tolumonas auensis DSM 9187]
          Length = 239

 Score = 99.3 bits (246), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 59/185 (31%), Gaps = 32/185 (17%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
               EKIALFID  N  A+       ID   +L       +V     Y        + + 
Sbjct: 1   MQSNEKIALFIDADNAPAA------RIDM--VLSELARYGVVNIRKAYGNWKNPTLKSW- 51

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIF 119
                         +   +  ++F    G    K++ D+ L +D  +   ++ ++ + + 
Sbjct: 52  ---------EDVLHEYAIQPIQQFDLTKG----KNATDMALVIDVMDVLYTKKVDIICLV 98

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE---IARD 176
           S D  FT LV       K V       +               F+ L     +   +A+ 
Sbjct: 99  SSDCDFTPLVTRTLSDGKFVIGFGERKAP-----VAFVNSCSRFLFLDQQVEQNITVAKP 153

Query: 177 PDEDK 181
           P   K
Sbjct: 154 PRSIK 158


>gi|27378275|ref|NP_769804.1| hypothetical protein blr3164 [Bradyrhizobium japonicum USDA 110]
 gi|27351422|dbj|BAC48429.1| blr3164 [Bradyrhizobium japonicum USDA 110]
          Length = 265

 Score = 98.9 bits (245), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 52/166 (31%), Gaps = 29/166 (17%)

Query: 6   EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
            ++A+ ID  N  AS+K          L +             Y        + ++ +  
Sbjct: 8   PRLAVLIDADN--ASAKIA------DGLFEEIAKIGEASVRRIYGDFSSSRSKGWADILS 59

Query: 66  LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDG 123
                     +      ++F    G    K++ D+ L +DA +   S   +   + S D 
Sbjct: 60  ----------KHAIIPQQQFAYTTG----KNASDITLVIDAMDLLHSGRFDGFCLVSSDS 105

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
            FT L A ++ +   V              +  R+    F+    L
Sbjct: 106 DFTRLAARIREQGVDVFGFGEQK-----TPESFRQACRRFVYTENL 146


>gi|94496412|ref|ZP_01302989.1| hypothetical protein SKA58_09476 [Sphingomonas sp. SKA58]
 gi|94424158|gb|EAT09182.1| hypothetical protein SKA58_09476 [Sphingomonas sp. SKA58]
          Length = 257

 Score = 98.9 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 30/180 (16%), Positives = 59/180 (32%), Gaps = 30/180 (16%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
           R  IAL ID  N  A+         +  ++        V     Y        + +    
Sbjct: 8   RGNIALLIDSDNASAA--------HFDSVMTVLAELGTVNIRRAYGNWSKTTLKAW---- 55

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122
                          +  ++F    G    K++ D+++ +DA +   S  ++   + S D
Sbjct: 56  ------AALSITQAIEPQQQFDLTKG----KNATDMKMTIDAMDLLASGRVDGFGLMSSD 105

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182
             FT LV  +++    V          +   +  RR    F+D+A L+        +  +
Sbjct: 106 SDFTPLVTRIRQDGIPVYGFG-----NANTPEGFRRACTRFIDVAALEPA-EVPASKPAR 159


>gi|258546012|ref|ZP_05706246.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826]
 gi|258518741|gb|EEV87600.1| conserved hypothetical protein [Cardiobacterium hominis ATCC 15826]
          Length = 265

 Score = 98.9 bits (245), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 54/174 (31%), Gaps = 30/174 (17%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           + +   ++A+ ID  N  + +           +L+             Y   V    +  
Sbjct: 11  IEEKAARLAVLIDADNASSQT--------INAILEETTKFGDATVKRIYGNFVSGGGKWK 62

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVI 118
           S ++               K  ++F    G    K++ D  + +DA +   +E  E   +
Sbjct: 63  SVINEF-----------AIKPMQQFAYTKG----KNATDGFMIIDAMDLLYTERFEGFCL 107

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
            S D  FT L   L+ +   V              +  R     F+ +  L  +
Sbjct: 108 VSSDSDFTALAIRLKEQGVMVYGFG-----KKQTPEAFRNACSQFIYVENLMPK 156


>gi|239623453|ref|ZP_04666484.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239521484|gb|EEQ61350.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 308

 Score = 98.6 bits (244), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 59/171 (34%), Gaps = 29/171 (16%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M     + A+ ID  N+  S K + +      +L     + I      Y     + ++ +
Sbjct: 1   MEQSERRFAVLIDADNV--SPKYIKY------ILDEVSDQGIATYKRIYGDWTDNEKRSW 52

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVI 118
             +  LLDW             ++++   G    K++ D  + +DA +   S  ++   +
Sbjct: 53  KNV--LLDWSVN--------PIQQYSYTTG----KNATDSAMIIDAMDILYSGNVDGFCL 98

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
            S D  FT L   L+     V  +    +         R   D F  L  +
Sbjct: 99  VSSDSDFTKLAQRLREAGMFVMGIGEQKTPKP-----FRAACDTFKLLEII 144


>gi|261415964|ref|YP_003249647.1| protein of unknown function DUF88 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261372420|gb|ACX75165.1| protein of unknown function DUF88 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302326593|gb|ADL25794.1| conserved domain protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 384

 Score = 98.6 bits (244), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 36/160 (22%), Positives = 62/160 (38%), Gaps = 24/160 (15%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           IA+FID  NL    K  G       L+        ++    Y             L PL 
Sbjct: 4   IAIFIDAENLTNWVKNNGVQ----SLMDELLPLGQIVVRKAYGKWSTP------QLIPLQ 53

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCF 125
             L+ NGF++V                K+S D+++ VD  E +    ++ +V+ +GD  F
Sbjct: 54  SALNENGFELV--------HTFHPVSGKNSTDIKMTVDTMEVALDSQVQWIVLATGDSDF 105

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165
           + L   L+ + K+V  V       S  S+ ++     ++ 
Sbjct: 106 SPLFRKLREQGKEVIGV----GPKSPLSECVKNSCSRYIY 141


>gi|83949890|ref|ZP_00958623.1| hypothetical protein ISM_02310 [Roseovarius nubinhibens ISM]
 gi|83837789|gb|EAP77085.1| hypothetical protein ISM_02310 [Roseovarius nubinhibens ISM]
          Length = 231

 Score = 98.6 bits (244), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 51/182 (28%), Gaps = 29/182 (15%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M +    +A+ ID  N   S K      D         S         Y          +
Sbjct: 1   MPEQTPLLAVLIDADN--TSPKWTQAIFD------EIASIGEASVRRCYGDFSSQQMNGW 52

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVI 118
           + +          G       A            K++ D+ L +DA +       +  V+
Sbjct: 53  NRVQ------AEFGLVPHHSPA--------NTVGKNASDIALVIDAMDLMHTGRFDGFVL 98

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
            S D  FT L + L+ +  +V  +           +  R+    F+ L  L      +  
Sbjct: 99  VSSDSDFTRLASRLREQGLEVFGIGARK-----TPEAFRKACKRFIYLENLGGAPETESR 153

Query: 179 ED 180
             
Sbjct: 154 AP 155


>gi|160935678|ref|ZP_02083053.1| hypothetical protein CLOBOL_00568 [Clostridium bolteae ATCC
           BAA-613]
 gi|158441422|gb|EDP19132.1| hypothetical protein CLOBOL_00568 [Clostridium bolteae ATCC
           BAA-613]
          Length = 308

 Score = 98.6 bits (244), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 58/171 (33%), Gaps = 29/171 (16%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M     + A+ ID  N+  S K + +      +L       I      Y     + ++ +
Sbjct: 1   MEQNERRFAVLIDADNV--SPKYIKY------ILDEVSDVGIATYKRIYGDWTDNEKRSW 52

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVI 118
             +  LLDW             ++++   G    K++ D  + +DA +   S  ++   +
Sbjct: 53  KNV--LLDWS--------VNPIQQYSYTTG----KNATDSAMIIDAMDILYSGNVDGFCL 98

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
            S D  FT L   L+     V  +    +         R   D F  L  +
Sbjct: 99  VSSDSDFTKLAQRLREAGMFVMGIGEQKTPKP-----FRAACDTFKLLEII 144


>gi|196234013|ref|ZP_03132849.1| protein of unknown function DUF88 [Chthoniobacter flavus Ellin428]
 gi|196221952|gb|EDY16486.1| protein of unknown function DUF88 [Chthoniobacter flavus Ellin428]
          Length = 180

 Score = 98.6 bits (244), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 36/175 (20%), Positives = 77/175 (44%), Gaps = 13/175 (7%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVV---GDPEQQF 60
           P+ ++ + +D +N+ +++K     +D+ KL     +   ++    Y  +     + + + 
Sbjct: 10  PQRRVLILVDESNVTSAAKVTNRKLDWLKLRDHLVNGRELLEMVVYVGLPPAMPEWQAER 69

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGL--EHLVI 118
              +  + WL  NGF VV+K              K+++DV +A+D  E S  +  + +++
Sbjct: 70  DKKNKFVFWLRSNGFLVVSKD----GSPADESHYKANVDVLMAIDGVELSTEMQPDVVIL 125

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
            +GD  F  L   L+R+  +V   S   +  +     L+  A+  +DL  L    
Sbjct: 126 VTGDADFAELALRLRRRGIRVEAASVAHTLGA----GLKTSANGIIDLGPLLASF 176


>gi|67921188|ref|ZP_00514707.1| Protein of unknown function DUF88 [Crocosphaera watsonii WH 8501]
 gi|67857305|gb|EAM52545.1| Protein of unknown function DUF88 [Crocosphaera watsonii WH 8501]
          Length = 134

 Score = 98.6 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 8/120 (6%)

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
                 L W+  NG++V+AK   +  +       K+++DVE+AVD        +  +I S
Sbjct: 6   EKQQGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIAVDLMALVGSYDTAIIVS 61

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG       ++  +  ++ +VS      SM SD L   AD ++DL  +K +I +    +
Sbjct: 62  GDGDLAYAADSVSYRGARIEVVS----LRSMTSDSLINVADRYIDLDQIKEDIQKTRKPN 117


>gi|312898144|ref|ZP_07757535.1| conserved hypothetical protein [Megasphaera micronuciformis F0359]
 gi|310620641|gb|EFQ04210.1| conserved hypothetical protein [Megasphaera micronuciformis F0359]
          Length = 281

 Score = 98.6 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 30/180 (16%), Positives = 55/180 (30%), Gaps = 29/180 (16%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            +   K+A+ ID  N+          ID   +L    +   ++    Y          + 
Sbjct: 1   MNQEMKLAVLIDAENI------SNKYID--VILSEANNLGNIVYKRIYGNWTTPQMASWK 52

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIF 119
            +                +  ++++        K+S D  L +D  +      L+   I 
Sbjct: 53  NIILDNA----------IQPIQQYSN----TIRKNSSDSALIIDTMDLLYQSDLDAYCIV 98

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
           S D  FT L + L+   K V  +                  + F+ L  L  E   +P E
Sbjct: 99  SSDSDFTRLASRLRESQKYVLGMGESK-----TPRSFISACNKFLYLDVLFEEACEEPVE 153


>gi|89070045|ref|ZP_01157376.1| hypothetical protein OG2516_09755 [Oceanicola granulosus HTCC2516]
 gi|89044382|gb|EAR50520.1| hypothetical protein OG2516_09755 [Oceanicola granulosus HTCC2516]
          Length = 238

 Score = 98.6 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 58/185 (31%), Gaps = 30/185 (16%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M D R  +A+ ID  N   S +  G       + +   S         Y          +
Sbjct: 1   MPDDRPLLAVLIDADN--TSPRHAG------AIFEEIASLGEASVRRCYGDFSSQQMAGW 52

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVI 118
           +               V A+       +      K+S D+ L +DA +       +  V+
Sbjct: 53  NR--------------VQAEHGIVPHHSPANTVGKNSSDISLVIDAMDLLHTGRFDGFVL 98

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI-ARDP 177
            S D  FT L + ++ +   V  +           D  R+    F+ L  L  +   + P
Sbjct: 99  ISSDSDFTRLASRIREQGLDVYGIGQKK-----TPDAFRKACKRFIFLENLGAQTDEKAP 153

Query: 178 DEDKK 182
             + K
Sbjct: 154 RGEAK 158


>gi|294011667|ref|YP_003545127.1| hypothetical protein SJA_C1-16810 [Sphingobium japonicum UT26S]
 gi|292674997|dbj|BAI96515.1| conserved hypothetical protein [Sphingobium japonicum UT26S]
          Length = 244

 Score = 98.6 bits (244), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 54/189 (28%), Gaps = 39/189 (20%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
           P   IAL ID  N+ A         D   +L        V     Y        + ++  
Sbjct: 6   PSGNIALLIDADNVSAD------HFDP--VLTVLAELGTVNIRRAYGNWSKPALKGWARQ 57

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSG 121
                      F +               R K++ D+++ +DA +   S  +    + S 
Sbjct: 58  AVTQAIETQQQFDL--------------TRGKNATDMKMTIDAMDLMASGRVTGFGLMSS 103

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA----------YLKN 171
           D  FT LV  L+++   V    T            R     F+D+            L  
Sbjct: 104 DSDFTPLVTRLRQEGLPVYGFGTDK-----TPQAFRSACTRFIDVGALTSARETPVELAE 158

Query: 172 EIARDPDED 180
                P  D
Sbjct: 159 STEEPPSPD 167


>gi|325107780|ref|YP_004268848.1| hypothetical protein Plabr_1213 [Planctomyces brasiliensis DSM
           5305]
 gi|324968048|gb|ADY58826.1| protein of unknown function DUF88 [Planctomyces brasiliensis DSM
           5305]
          Length = 245

 Score = 98.2 bits (243), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 38/161 (23%), Positives = 58/161 (36%), Gaps = 24/161 (14%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           K A+ +D  NL    K  G     + LL    +    I    Y     D    F     L
Sbjct: 6   KAAILLDAENLTHWIKYDG----PKTLLNELNADGSFIIRKAYARWTNDSLADFQESLTL 61

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124
           L      GF +V                K+S D++L VDA + +  + ++  V+ +GD  
Sbjct: 62  L------GFDLV--------HTFHPVSKKNSADIQLTVDAMQFAADKTVQTFVLATGDSD 107

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165
           F+ L   L+   K V  V       S  S+ +R     F+ 
Sbjct: 108 FSPLFRRLREMGKTVIGV----GKRSPLSESVRNSCSRFIY 144


>gi|127511410|ref|YP_001092607.1| hypothetical protein Shew_0476 [Shewanella loihica PV-4]
 gi|126636705|gb|ABO22348.1| protein of unknown function DUF88 [Shewanella loihica PV-4]
          Length = 265

 Score = 98.2 bits (243), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 53/163 (32%), Gaps = 29/163 (17%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           KIA+FID  N      A     D   +L       +V     Y        + +      
Sbjct: 6   KIAVFIDADN------APARKFD--VILAELAKHGVVSIRKAYGNWKSPGLKHW------ 51

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDGC 124
                    +   +  ++F    G    K++ D+ L +DA +   ++ ++ + + S D  
Sbjct: 52  ----EDILHEYAIQPIQQFDLTKG----KNATDIALVIDAMDILYTKDIDIMCLISSDCD 103

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
           FT LV  +    KKV       +               F+ L 
Sbjct: 104 FTPLVTRVLSDGKKVFGFGERKAP-----TAFVNSCSRFLYLD 141


>gi|307292778|ref|ZP_07572624.1| hypothetical protein SphchDRAFT_0251 [Sphingobium chlorophenolicum
           L-1]
 gi|306880844|gb|EFN12060.1| hypothetical protein SphchDRAFT_0251 [Sphingobium chlorophenolicum
           L-1]
          Length = 246

 Score = 97.8 bits (242), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 52/168 (30%), Gaps = 29/168 (17%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
           P   IAL ID  N+ A         D   +L        V     Y        + ++  
Sbjct: 6   PSGNIALLIDADNVSAD------HFDP--VLTVLAELGTVNIRRAYGNWSKPALKGWARQ 57

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSG 121
                      F +               + K++ D+++ +DA +   S  +    + S 
Sbjct: 58  AVTQAIETQQQFDL--------------TKGKNATDMKMTIDAMDLMASGRVTGFGLMSS 103

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
           D  FT LV  ++++   V    T            R     F+D+  L
Sbjct: 104 DSDFTPLVTRIRQEGLPVYGFGTDK-----TPQAFRSACTRFIDVGAL 146


>gi|319959088|gb|ADV90708.1| LabA [Nostoc linckia EC108]
          Length = 127

 Score = 97.8 bits (242), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 8/108 (7%)

Query: 72  YNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAA 131
            NG++V+AK   +  +       K+++DVE+AVD     +  +  V+ SGDG     V +
Sbjct: 1   RNGYRVIAKDLVQLPDGS----KKANLDVEIAVDMMALVDSYDTAVLVSGDGDLAYAVNS 56

Query: 132 LQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
           +  +  +V +VS      SM SD L   +D ++DL  +K +I + P +
Sbjct: 57  VSYRGVRVEVVS----LRSMTSDSLINVSDRYIDLEAIKEDIQKTPRQ 100


>gi|326330720|ref|ZP_08197024.1| hypothetical protein NBCG_02155 [Nocardioidaceae bacterium Broad-1]
 gi|325951561|gb|EGD43597.1| hypothetical protein NBCG_02155 [Nocardioidaceae bacterium Broad-1]
          Length = 252

 Score = 97.8 bits (242), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 52/181 (28%), Gaps = 30/181 (16%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M +P  +IAL ID  N  A+            +L        V     Y        + +
Sbjct: 1   MTEPF-RIALLIDADNAPAA--------KIDAILNDLAEYGEVTIRRAYGNWTKPELKGW 51

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGL--EHLVI 118
                              +  ++F         K++ D+ LA+DA E       +   +
Sbjct: 52  ----------IEELHDAAIRPMQQFD----LTAHKNASDMALAIDAVELLHAAIPDAFAL 97

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
            S D  FT LV  L+ K + V       +         +     F  +  L         
Sbjct: 98  VSSDSDFTPLVHYLREKGRAVYGYGREKTPAP-----FKSACTRFTVVEKLGGSEEETDA 152

Query: 179 E 179
           +
Sbjct: 153 D 153


>gi|163815163|ref|ZP_02206544.1| hypothetical protein COPEUT_01321 [Coprococcus eutactus ATCC 27759]
 gi|158449572|gb|EDP26567.1| hypothetical protein COPEUT_01321 [Coprococcus eutactus ATCC 27759]
          Length = 322

 Score = 97.8 bits (242), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 27/177 (15%), Positives = 54/177 (30%), Gaps = 30/177 (16%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           K A+ ID  N+  S+K +    D             +     Y     +           
Sbjct: 11  KYAILIDSENV--SAKYIESIFD------ELSRLGSITVRKIYGDWSKNNNG-------- 54

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124
             W          +  ++F+   G    K+S D  + +DA +   +  ++   + + D  
Sbjct: 55  --WDKDCLLSYSIQPVQQFSYTAG----KNSTDSAMIIDAMDLLYTSNIDGFCLVTSDSD 108

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK-NEIARDPDED 180
           FT L + L+   K+V  +                    F  L  L   ++ +   + 
Sbjct: 109 FTRLASRLREAGKQVIGMGERK-----TPKAFVSACTSFKILDSLVNEDLNKPASKP 160


>gi|120612954|ref|YP_972632.1| hypothetical protein Aave_4318 [Acidovorax citrulli AAC00-1]
 gi|120591418|gb|ABM34858.1| protein of unknown function DUF88 [Acidovorax citrulli AAC00-1]
          Length = 298

 Score = 97.4 bits (241), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 50/161 (31%), Gaps = 29/161 (18%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           +IAL ID  N  A            ++L    +  ++     Y          +      
Sbjct: 14  RIALLIDADNAPAEM--------IDEILTELSTLGVISIRRAYGNWTKSALSGWQSKL-- 63

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124
                    +   +  ++F  +    R K++ D+ + VDA E   ++  +   I S D  
Sbjct: 64  --------LEFAVRPIQQFDYS----RRKNATDMAMTVDAMELLYTDRPDAFGIVSSDAD 111

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165
           FT LV  L+ K   V       +               F+ 
Sbjct: 112 FTPLVMHLRAKGAAVYGFGAQQTPRP-----FVNACSRFLY 147


>gi|225018409|ref|ZP_03707601.1| hypothetical protein CLOSTMETH_02356 [Clostridium methylpentosum
           DSM 5476]
 gi|224948827|gb|EEG30036.1| hypothetical protein CLOSTMETH_02356 [Clostridium methylpentosum
           DSM 5476]
          Length = 246

 Score = 97.4 bits (241), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 51/172 (29%), Gaps = 29/172 (16%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            +   KIA+ ID  N+  S K + +      +L       +      Y         ++ 
Sbjct: 1   MEQERKIAVLIDADNV--SQKYIKY------ILDEIAKHGLPTYKRIYGDWTSPQLARWK 52

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIF 119
                                ++++   G    K+S D  L +DA +   S  +    I 
Sbjct: 53  ----------DVLLDYSITPIQQYSYTAG----KNSTDSALIIDAMDILYSHNINGFCIV 98

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
           S D  FT LV  L+     V  +    +             + F  L  L  
Sbjct: 99  SSDSDFTRLVVRLRESGMYVVGMGEKKTPKP-----FIAACEQFKYLEALAQ 145


>gi|114564810|ref|YP_752324.1| hypothetical protein Sfri_3658 [Shewanella frigidimarina NCIMB 400]
 gi|114336103|gb|ABI73485.1| protein of unknown function DUF88 [Shewanella frigidimarina NCIMB
           400]
          Length = 242

 Score = 97.4 bits (241), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 59/182 (32%), Gaps = 37/182 (20%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M D  +KIA+FID  N      A    ID  K+L       +V     Y        + +
Sbjct: 1   MKDK-DKIAVFIDADN------APAKKID--KVLSELARYGVVNIRKAYGNWKNANLKTW 51

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVI 118
                          +   +  ++F    G    K++ D+ L +D  +   ++ ++ + +
Sbjct: 52  ----------EDVLHEYAIQPIQQFDLTKG----KNATDMALVIDVMDVLYTKDVDVICL 97

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
            S D  FT LV       K +       +               F+ L         DP 
Sbjct: 98  VSSDCDFTPLVTRALADGKTIIGFGERKAPMP-----FVNSCSRFLFLDD-------DPS 145

Query: 179 ED 180
           ED
Sbjct: 146 ED 147


>gi|254787275|ref|YP_003074704.1| hypothetical protein TERTU_3357 [Teredinibacter turnerae T7901]
 gi|237685617|gb|ACR12881.1| conserved hypothetical protein [Teredinibacter turnerae T7901]
          Length = 258

 Score = 97.4 bits (241), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 54/184 (29%), Positives = 89/184 (48%), Gaps = 15/184 (8%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAI-VIRAYYYTTVVGDPE----QQ 59
             K  +F+D  NL  +    G+ + +  + K   ++   V+RA  Y  V    E    + 
Sbjct: 1   MLKAGIFLDMENLNMNG---GWGMRFDVIRKLVEAQGTTVLRANVYIAVDNAREKYDFEY 57

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119
                   D +   GF +V K  + FT   G + +K++ D++LAVDA  Q+E L+++++ 
Sbjct: 58  REKAQARRDKMRLAGFHIVEKEIRRFTNADGTQNIKANADLDLAVDAMLQAENLDYILLG 117

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE--IARDP 177
           +GDG F  LV ALQ K K+V  V+         S +LRR+ DY+   A +     I  DP
Sbjct: 118 TGDGDFLRLVRALQSKGKRVDAVAI-----HNVSGELRREVDYYFHGATIPGLLPIKNDP 172

Query: 178 DEDK 181
            + +
Sbjct: 173 KKIR 176


>gi|85374093|ref|YP_458155.1| hypothetical protein ELI_06330 [Erythrobacter litoralis HTCC2594]
 gi|84787176|gb|ABC63358.1| hypothetical protein ELI_06330 [Erythrobacter litoralis HTCC2594]
          Length = 245

 Score = 97.0 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/172 (19%), Positives = 56/172 (32%), Gaps = 29/172 (16%)

Query: 1   MFDPR-EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
           M D   + IAL ID  N           ID   +L        V     Y     +  Q 
Sbjct: 1   MPDTELKNIALLIDADN------TTPKGIDP--VLTVMAELGQVNIKRAYGNFAKNNLQN 52

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLV 117
           +  +            +   +  ++F    G    K++ D+ + +DA +      ++   
Sbjct: 53  WDKITH----------KYGIRPQQQFDLTAG----KNATDMAMTIDAIDLLYQGKVDGFG 98

Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
           I S D  FT LV  L++    V    +         D  +     F+D+  L
Sbjct: 99  IMSSDSDFTPLVTRLRQDGLVVYGFGSTK----KTPDAFKSACTRFIDIDAL 146


>gi|225165548|ref|ZP_03727367.1| conserved hypothetical protein [Opitutaceae bacterium TAV2]
 gi|224800202|gb|EEG18613.1| conserved hypothetical protein [Opitutaceae bacterium TAV2]
          Length = 280

 Score = 97.0 bits (240), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 52/170 (30%), Gaps = 28/170 (16%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M +  ++IA+ ID  N+  S K +    D   LL        V     Y          +
Sbjct: 1   MENNDKRIAVLIDAENV--SFKLVDEIFDEIALL------GRVTHRRVYGDFTTSHMTGW 52

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVI 118
           + +                +   +     G    K+S D+ L +DA +   +  ++ + I
Sbjct: 53  NAVATDFA----------LRQVTQRHSKNG----KNSSDIVLVIDAMDILHAGKVDAICI 98

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
            S D  FT L   +      V  +            +  +    F  L  
Sbjct: 99  VSNDNDFTRLAMRIVEAGLDVIGLGE----EGKTGHEFVKACSTFKHLTD 144


>gi|302325583|gb|ADL24784.1| conserved domain protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 253

 Score = 96.6 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 68/167 (40%), Gaps = 27/167 (16%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M +     A+F+D  NL   +   G       L+K+ +S+  V+    Y           
Sbjct: 19  MENN---TAVFVDAENLTFWAYNNGVH----DLMKSLQSQGPVVIRKAYGKWTSPQLS-- 69

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVI 118
               PL    + NGF+++        +       K+S D+++ VDA E +    L+ +V+
Sbjct: 70  ----PLQQEFNINGFELI--------QTYHPITGKNSADIKMVVDAMEAATNPCLQTIVL 117

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165
            +GD  F+ L   L+   KKV  V       S  S+ ++    +++ 
Sbjct: 118 ATGDSDFSPLFRKLREMGKKVIGV----GPLSKLSECVQSSCTHYIY 160


>gi|261414502|ref|YP_003248185.1| protein of unknown function DUF88 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261370958|gb|ACX73703.1| protein of unknown function DUF88 [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 235

 Score = 96.6 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 68/167 (40%), Gaps = 27/167 (16%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M +     A+F+D  NL   +   G       L+K+ +S+  V+    Y           
Sbjct: 1   MENN---TAVFVDAENLTFWAYNNGVH----DLMKSLQSQGPVVIRKAYGKWTSPQLS-- 51

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVI 118
               PL    + NGF+++        +       K+S D+++ VDA E +    L+ +V+
Sbjct: 52  ----PLQQEFNINGFELI--------QTYHPITGKNSADIKMVVDAMEAATNPCLQTIVL 99

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165
            +GD  F+ L   L+   KKV  V       S  S+ ++    +++ 
Sbjct: 100 ATGDSDFSPLFRKLREMGKKVIGV----GPLSKLSECVQSSCTHYIY 142


>gi|295094936|emb|CBK84027.1| Uncharacterized conserved protein [Coprococcus sp. ART55/1]
          Length = 320

 Score = 96.6 bits (239), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 27/177 (15%), Positives = 55/177 (31%), Gaps = 30/177 (16%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           K A+ ID  N+  S+K +    D             +     Y     +           
Sbjct: 11  KYAILIDSENV--SAKYIESIFD------ELSRLGSITVRKIYGDWSKNNNG-------- 54

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGC 124
             W          +  ++F+   G    K+S D  + +DA +   +  ++   + + D  
Sbjct: 55  --WDKDCLLSYSIQPVQQFSYTAG----KNSTDSAMIIDAMDLLYTSNIDGFCLVTSDSD 108

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK-NEIARDPDED 180
           FT L + L+   K+V  +                    F  L  L   ++ +   ++
Sbjct: 109 FTRLASRLREAGKQVIGMGERK-----TPKAFVSACTSFKILDSLVTEDLNKPASKN 160


>gi|149184574|ref|ZP_01862892.1| hypothetical protein ED21_27688 [Erythrobacter sp. SD-21]
 gi|148831894|gb|EDL50327.1| hypothetical protein ED21_27688 [Erythrobacter sp. SD-21]
          Length = 241

 Score = 96.2 bits (238), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 55/184 (29%), Gaps = 29/184 (15%)

Query: 1   MFDPR-EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
           M D   + IAL ID  N           ID   +L        V     Y        Q 
Sbjct: 1   MSDKELKNIALLIDADN------TTPRGIDP--VLTVMAELGQVNIKRAYGNFTKKNLQG 52

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLV 117
           +               +      ++F         K++ D+ + +DA +      ++   
Sbjct: 53  WDKY----------SHKFGILPYQQFD----MTTGKNATDMAMTIDAIDLLYQGKVDGFG 98

Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
           I S D  FT L   L++    V          S   D  +     F+D+  L    A +P
Sbjct: 99  IMSSDSDFTPLATRLRQDGLIVYGF----GSKSKTPDAFKSACTRFIDIDALIAGAADEP 154

Query: 178 DEDK 181
              K
Sbjct: 155 APSK 158


>gi|330952960|gb|EGH53220.1| hypothetical protein PSYCIT7_16619 [Pseudomonas syringae Cit 7]
          Length = 117

 Score = 95.9 bits (237), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 48/123 (39%), Gaps = 12/123 (9%)

Query: 45  RAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAV 104
            A+ Y    GD     S        L   GF V  K   + ++       K   DV + +
Sbjct: 1   HAFAYAIDRGD-----SKQQQFQQILRNLGFTVRLKPYIQRSDGSA----KGDWDVGITI 51

Query: 105 DAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
           D  + +  ++ +V+ SGDG F  L+  +     K  + +     P + ++ L R A  ++
Sbjct: 52  DIMDFAPQVDEIVLASGDGDFDMLLERVIS---KHGVEAVAYGVPGLTANSLIRAASRYV 108

Query: 165 DLA 167
            + 
Sbjct: 109 PIE 111


>gi|325001928|ref|ZP_08123040.1| hypothetical protein PseP1_24341 [Pseudonocardia sp. P1]
          Length = 148

 Score = 95.9 bits (237), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/166 (22%), Positives = 61/166 (36%), Gaps = 23/166 (13%)

Query: 1   MFDPREKIALFIDGANLYASSKA-LGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58
           M    E+IAL +D  NL   ++  LG    D+  +  A   R  V+    Y         
Sbjct: 1   MAHEDERIALLLDYENLAIGARDGLGVVPFDFGPVADALAERGRVVVRRAYA-------- 52

Query: 59  QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG---LEH 115
            +S        +     +++    +           K++ D++LAVDA E +     +  
Sbjct: 53  DWSAFDEDRRLMARAQVELIEIPQRI------GGSRKNAADIKLAVDAIELAYEREFVTT 106

Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
             I +GD  FT L+  L+   K+V  +       S  S  L    D
Sbjct: 107 FAIATGDSDFTPLMHKLRELDKRVIGI----GVQSSTSALLPPACD 148


>gi|328955609|ref|YP_004372942.1| hypothetical protein Corgl_1019 [Coriobacterium glomerans PW2]
 gi|328455933|gb|AEB07127.1| hypothetical protein Corgl_1019 [Coriobacterium glomerans PW2]
          Length = 310

 Score = 95.9 bits (237), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 53/170 (31%), Gaps = 29/170 (17%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            D   K A+ ID  N+         D   + +L    +  I      Y          + 
Sbjct: 5   LDSDLKFAILIDADNI--------SDKYIKIVLDEVANYGIATYKRIYGDWTSPRLASWK 56

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIF 119
                         +      ++++   G    K++ D  + +DA +   S  ++   I 
Sbjct: 57  ----------NCLLENSILPMQQYSYTYG----KNATDSAMIIDAMDILYSGTVDGFTIV 102

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
           S D  FT LVA L+    +V  +    +     S       + F  L  L
Sbjct: 103 SSDSDFTRLVARLRESGMQVIGMGEQKTPEPFIS-----ACNQFKYLDLL 147


>gi|224827245|ref|ZP_03700339.1| protein of unknown function DUF88 [Lutiella nitroferrum 2002]
 gi|224600534|gb|EEG06723.1| protein of unknown function DUF88 [Lutiella nitroferrum 2002]
          Length = 258

 Score = 95.5 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 24/167 (14%), Positives = 48/167 (28%), Gaps = 30/167 (17%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
              +A+ ID  N+     + G+  D   +L+      ++     Y               
Sbjct: 1   MANVAVLIDADNV-----SPGWIED---VLEEAGKLGVLALKRVYGDFSR---------- 42

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGD 122
                      +      ++F    G    K++ D+ L +DA +   S   +   + S D
Sbjct: 43  -HDKAWRDLCARFAIHPIQQFPNTKG----KNASDITLVIDAMDMLHSGRYQSFCLVSSD 97

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
             F+ L   L+    +V                       F+ +  L
Sbjct: 98  SDFSRLATRLREDGLEVWGFGEEK-----TPSAFVNACSKFVYVEVL 139


>gi|84500442|ref|ZP_00998691.1| hypothetical protein OB2597_10806 [Oceanicola batsensis HTCC2597]
 gi|84391395|gb|EAQ03727.1| hypothetical protein OB2597_10806 [Oceanicola batsensis HTCC2597]
          Length = 236

 Score = 95.5 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 57/174 (32%), Gaps = 29/174 (16%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M + R   A+ ID  N+ A           + +LK   S         Y     +     
Sbjct: 1   MPETRPLYAVLIDADNIPARF--------AQAILKEITSFGEPALRRVYGDWGAE----- 47

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVI 118
             L P  + +   G            +     + K++ D+ L +DA +   +   +  V+
Sbjct: 48  -RLRPWTEQVRELGLVAH--------QETANTKGKNASDIGLVIDAMDILHTGRFDGFVL 98

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
            S D  FT L   ++ +   V  +    +        LR   + F+ +  +  E
Sbjct: 99  VSSDSDFTALANRVREQGLDVIGIGESKAPE-----SLRNVCNRFILIENIVEE 147


>gi|260574190|ref|ZP_05842195.1| protein of unknown function DUF88 [Rhodobacter sp. SW2]
 gi|259023656|gb|EEW26947.1| protein of unknown function DUF88 [Rhodobacter sp. SW2]
          Length = 252

 Score = 95.5 bits (236), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 58/185 (31%), Gaps = 32/185 (17%)

Query: 1   MFDPR-EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
           M +PR  ++ + ID  N+ AS            + +   +         Y          
Sbjct: 1   MAEPRAPRLCVLIDADNVPASY--------ATAIFEEVAALGEASVRRIYGDWSAVRLGG 52

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLV 117
           ++               +     ++F+   G    K++ D+ L + A +   S   +  V
Sbjct: 53  WARQVA----------ALGLVADQQFSNTKG----KNASDIGLVISAMDFLHSGLFDAFV 98

Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
           + S D  FT L A ++ +   V  +           +  R     F+ +  L  E     
Sbjct: 99  LVSSDSDFTRLAARIREQGLDVYGIGEKK-----TPEAFRMACKRFIYVENLGAE--EPA 151

Query: 178 DEDKK 182
            E  +
Sbjct: 152 REAPR 156


>gi|77461998|ref|YP_351502.1| hypothetical protein RSP_1459 [Rhodobacter sphaeroides 2.4.1]
 gi|126460888|ref|YP_001042002.1| hypothetical protein Rsph17029_0110 [Rhodobacter sphaeroides ATCC
           17029]
 gi|332559925|ref|ZP_08414247.1| hypothetical protein RSWS8N_12720 [Rhodobacter sphaeroides WS8N]
 gi|77386416|gb|ABA77601.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1]
 gi|126102552|gb|ABN75230.1| conserved hypothetical protein [Rhodobacter sphaeroides ATCC 17029]
 gi|332277637|gb|EGJ22952.1| hypothetical protein RSWS8N_12720 [Rhodobacter sphaeroides WS8N]
          Length = 248

 Score = 95.1 bits (235), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 59/184 (32%), Gaps = 31/184 (16%)

Query: 1   MFDPR-EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
           M DPR  ++ + ID  N+ A+            + +   +         Y          
Sbjct: 1   MSDPRAPRLCVLIDADNVPANY--------AEAIFEEIAALGEASVRRIYGDWSA----- 47

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLV 117
                  L+        +     ++F+   G    K++ D+ L + A +   S   +  V
Sbjct: 48  -----MRLNAWAKKVAALGLVADQQFSNTKG----KNASDIGLVISAMDFLHSGLFDGFV 98

Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
           + S D  FT L A ++ +   V  +           +  R     F+ +  L ++     
Sbjct: 99  LVSSDSDFTRLAARIREQGLDVYGIGEKK-----TPEAFRMACKRFIYVENLGSD-EPPA 152

Query: 178 DEDK 181
            E +
Sbjct: 153 REPR 156


>gi|229815424|ref|ZP_04445756.1| hypothetical protein COLINT_02472 [Collinsella intestinalis DSM
           13280]
 gi|229808957|gb|EEP44727.1| hypothetical protein COLINT_02472 [Collinsella intestinalis DSM
           13280]
          Length = 301

 Score = 95.1 bits (235), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 58/186 (31%), Gaps = 31/186 (16%)

Query: 1   MFD--PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58
           MF+     + A+ ID  N+         +   + +L    +  +      Y         
Sbjct: 1   MFETTSELRFAVLIDADNV--------SEKYIKVILDEISNAGVATYKRIYGDWTSPRLA 52

Query: 59  QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHL 116
            +                      ++++   G    K++ D  + +DA +   S  ++  
Sbjct: 53  SWKS----------CLLDHSIIPMQQYSYTYG----KNATDSAMIIDAMDILYSGTVDGF 98

Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
            I S D  FT LVA L+     V  +    +     S       + F  L  L  +   +
Sbjct: 99  AIVSSDSDFTRLVARLRESGMIVIGMGEQKTPKPFIS-----ACNQFKYLDLLYAQRQDE 153

Query: 177 PDEDKK 182
             ED +
Sbjct: 154 ESEDAQ 159


>gi|256822960|ref|YP_003146923.1| hypothetical protein Kkor_1743 [Kangiella koreensis DSM 16069]
 gi|256796499|gb|ACV27155.1| protein of unknown function DUF88 [Kangiella koreensis DSM 16069]
          Length = 236

 Score = 95.1 bits (235), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 29/167 (17%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            +  + IALF+D  N  ASSK       +  +L    +  +VI    Y        + + 
Sbjct: 1   MEHNKHIALFVDADN--ASSKY------FDLILSDLANHGMVIIRKAYGNWKNANLKGW- 51

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIF 119
                         +   +  ++F    G    K++ D+ +A+D  +    + ++   + 
Sbjct: 52  ---------EDILLEFAIQPIQQFDLTKG----KNATDLAMAIDVMDVLYGKDVDIFCLV 98

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
           + D  FT L   L  + K V              D  R     F++L
Sbjct: 99  TSDCDFTPLATRLINEGKLVFGYGETK-----TPDAFRNACTRFLEL 140


>gi|126729949|ref|ZP_01745761.1| hypothetical protein SSE37_16263 [Sagittula stellata E-37]
 gi|126709329|gb|EBA08383.1| hypothetical protein SSE37_16263 [Sagittula stellata E-37]
          Length = 233

 Score = 94.7 bits (234), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 57/186 (30%), Gaps = 31/186 (16%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M +    +A+ IDG N   S K      D         S         Y          +
Sbjct: 1   MPNDTRLLAILIDGDN--TSPKYARALFD------EIASLGEASVRRVYGDFASQQMNGW 52

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVI 118
           S +            +           +      K++ D+ L +DA +       +  V+
Sbjct: 53  SRVTA----------EYGLVPL----HSPANTVGKNASDISLVIDAMDLMHTERFDGFVL 98

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL--KNEIARD 176
            S D  FT L + ++ +   V  +           D  R+    F+ L  +    E ++D
Sbjct: 99  VSSDSDFTRLASRIREQGLDVYGMGMQK-----TPDAFRKACKRFIYLENIDSAPEESKD 153

Query: 177 PDEDKK 182
              DK+
Sbjct: 154 RKTDKR 159


>gi|75674368|ref|YP_316789.1| hypothetical protein Nwi_0169 [Nitrobacter winogradskyi Nb-255]
 gi|74419238|gb|ABA03437.1| Protein of unknown function DUF88 [Nitrobacter winogradskyi Nb-255]
          Length = 271

 Score = 94.7 bits (234), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 60/183 (32%), Gaps = 36/183 (19%)

Query: 3   DPREKI---ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
           +PR+++   A+FID  N+               + +             Y  +     + 
Sbjct: 4   EPRQRLPRFAVFIDAENVP--------PKFADGIFREIAQLGDAPVRLIYGNLSDPNLKG 55

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLV 117
           ++              +V+   + E  +   +   ++S D+ + +DA +      +    
Sbjct: 56  WT--------------EVLPDHSLERRDPAVK--GRNSADMAIVIDAMDLLHDGRIHGFC 99

Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
           + S D  FT L A L+R+   V              D  RR  + F+ L  L     +  
Sbjct: 100 LISSDSDFTGLAARLRREGANVYGFGEKK-----TPDCFRRACNRFISLESLLPR--KPA 152

Query: 178 DED 180
            + 
Sbjct: 153 RKP 155


>gi|323484352|ref|ZP_08089719.1| hypothetical protein HMPREF9474_01470 [Clostridium symbiosum
           WAL-14163]
 gi|323692362|ref|ZP_08106599.1| maebl [Clostridium symbiosum WAL-14673]
 gi|323402346|gb|EGA94677.1| hypothetical protein HMPREF9474_01470 [Clostridium symbiosum
           WAL-14163]
 gi|323503582|gb|EGB19407.1| maebl [Clostridium symbiosum WAL-14673]
          Length = 298

 Score = 94.3 bits (233), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 55/183 (30%), Gaps = 29/183 (15%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            D ++KIA+ ID  N+   SK        + ++       I      Y          + 
Sbjct: 1   MDKQDKIAVLIDAENV---SKKY-----IKLIMDEVSDYGIATYKRIYGDFTNPSVMAWQ 52

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIF 119
                                 +F    G    K++ D  L +DA +   S  +    + 
Sbjct: 53  DALRDFA----------LTPVFQFNYTKG----KNASDSALIIDAMDILYSGKVNGFCLV 98

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
           + D  FT L   L+     V  +           + L    + F  L  L  E   +  E
Sbjct: 99  TSDSDFTKLAIRLREAGMIVIGMGEQK-----TPNSLVSACETFKFLDLLYQESLEEQAE 153

Query: 180 DKK 182
           D+K
Sbjct: 154 DEK 156


>gi|261367119|ref|ZP_05980002.1| conserved hypothetical protein [Subdoligranulum variabile DSM
           15176]
 gi|282571242|gb|EFB76777.1| conserved hypothetical protein [Subdoligranulum variabile DSM
           15176]
          Length = 275

 Score = 94.3 bits (233), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 54/169 (31%), Gaps = 31/169 (18%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRK-LLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
           K+A+ ID  N+            Y K +L    S  +      Y             L  
Sbjct: 5   KLAILIDADNI---------SPKYVKVILDEAASFGVAACKRIYGDWSD------VRLKS 49

Query: 66  LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDG 123
             D L  N         ++++   G    K++ D  + +DA +      L+   I S D 
Sbjct: 50  WKDALLNNSI----IPIQQYSYTTG----KNATDSAMIIDAMDLLYGGNLDGFCIVSSDS 101

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
            FT L A L+   K V  +    +          +  D F  L  + + 
Sbjct: 102 DFTRLAARLREAGKLVIGMGESKALGP-----FVKACDQFKYLDLILDH 145


>gi|159042661|ref|YP_001531455.1| hypothetical protein Dshi_0105 [Dinoroseobacter shibae DFL 12]
 gi|157910421|gb|ABV91854.1| conserved hypothetical protein [Dinoroseobacter shibae DFL 12]
          Length = 236

 Score = 94.3 bits (233), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 56/172 (32%), Gaps = 31/172 (18%)

Query: 2   FDPREK--IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
              R++  +A+ ID  N+ A             +LK   S         Y        + 
Sbjct: 1   MPNRDRPLLAVLIDADNVPAKF--------AEAILKEVASIGEPALRRVYGDWSSGRLRN 52

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLV 117
           ++                V  +     ++      K++ D+ L +DA +       +  V
Sbjct: 53  WADK--------------VLSLGLVAHQDTANTTGKNASDIGLVIDAMDILHGGRFDGFV 98

Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
           + S D  FT+L   L+   K+V  +    +        LR   + F+ +  +
Sbjct: 99  LVSSDSDFTSLANRLREDGKEVIGIGEKKAPE-----SLRNVCNRFIFIENI 145


>gi|290968037|ref|ZP_06559586.1| conserved hypothetical protein [Megasphaera genomosp. type_1 str.
           28L]
 gi|290781943|gb|EFD94522.1| conserved hypothetical protein [Megasphaera genomosp. type_1 str.
           28L]
          Length = 278

 Score = 93.9 bits (232), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 51/170 (30%), Gaps = 29/170 (17%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            D   K+A+ ID  N+  SSK          +L    +   VI    Y          + 
Sbjct: 1   MDHEMKLAVVIDAENI--SSKY------IEVILSEANNLGDVIYKRIYGNWTTPQMASWR 52

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIF 119
                             +  ++++        K+S D  L +D  +      L+   I 
Sbjct: 53  TTILDNA----------IQPVQQYSN----TIRKNSSDSALIIDTMDLLYQSNLDGFCIV 98

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
           S D  FT L + L+   K V  +                  + F+ L  L
Sbjct: 99  SSDSDFTRLASRLRESQKYVLGMGESK-----TPRSFISACNKFLYLDIL 143


>gi|116671994|ref|YP_832927.1| hypothetical protein Arth_3452 [Arthrobacter sp. FB24]
 gi|116612103|gb|ABK04827.1| protein of unknown function DUF88 [Arthrobacter sp. FB24]
          Length = 282

 Score = 93.9 bits (232), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 35/178 (19%), Positives = 66/178 (37%), Gaps = 24/178 (13%)

Query: 1   MFDPREK-IALFIDGANLYASSKALGFDI-------DYRKLLKAFRSRAIVIRAYYYTTV 52
           M   +++ +A+F+D  NL+   K     +       D  K+++             Y   
Sbjct: 1   MAGSQQRNVAIFLDMENLFGGYKNDVTSVPLATVVRDIEKVVEDTGLGGQTALTRAYANW 60

Query: 53  VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS-- 110
                  +       +           K  + F+     +  K++ D+EL VDA E +  
Sbjct: 61  GRADMGGYRSQLLAHN----------IKPVQVFSF---DQSSKNAADIELVVDALEVAAD 107

Query: 111 -EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
              +E  V+ SGDG F  L+  L    K+  + +T      + +  L+  AD+F  + 
Sbjct: 108 MPWIELFVVVSGDGDFVPLLRRLHALGKRSLVATTSQPKAGVVNKVLQSVADHFHVID 165


>gi|254443296|ref|ZP_05056772.1| hypothetical protein VDG1235_1532 [Verrucomicrobiae bacterium
           DG1235]
 gi|198257604|gb|EDY81912.1| hypothetical protein VDG1235_1532 [Verrucomicrobiae bacterium
           DG1235]
          Length = 242

 Score = 93.9 bits (232), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 52/165 (31%), Gaps = 29/165 (17%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
             E IAL ID  N  A+       ID+  ++    S   V     Y          +   
Sbjct: 7   SSESIALLIDADNAPAA------KIDF--IIAELASYGSVDIRRAYGNWKKAALSGW--- 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSG 121
                           +  + F    G    K++ D+ L ++A +   ++ L    + S 
Sbjct: 56  -------EKVLHDYAIQPIQHFDIVKG----KNASDMGLLIEAMDILYTKNLGTFCLVSS 104

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
           D  FT LV  L+   K+V       +     +         F+ L
Sbjct: 105 DCDFTPLVLRLRADGKQVIGFGDAKTPAPFVA-----SCTRFLYL 144


>gi|50955250|ref|YP_062538.1| hypothetical protein Lxx16560 [Leifsonia xyli subsp. xyli str.
           CTCB07]
 gi|50951732|gb|AAT89433.1| conserved hypothetical protein [Leifsonia xyli subsp. xyli str.
           CTCB07]
          Length = 362

 Score = 93.9 bits (232), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 64/213 (30%), Gaps = 49/213 (23%)

Query: 1   MFDPRE-KIALFIDGANLYAS---------------------------SKALGFDIDYRK 32
           M +P + ++A++ID  N+  S                           +K     +D   
Sbjct: 10  MSEPGDGRVAVYIDFDNIVISRYDQVHGRGQFMRDKQKTGALPKPAFAAKLAEARVDLGA 69

Query: 33  LLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRK 92
           ++    S   ++    Y         ++             G  V               
Sbjct: 70  IIDFASSFGTIVLTRAYADWSSAVNAEYRGQL--------VGRAVDLVQL-----FPAAA 116

Query: 93  RVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDP 149
             K+  D+ LAVD  E       L H+VI +GD  +  L   ++R  + V  +       
Sbjct: 117 YGKNGGDIRLAVDTVEDLFRLPELTHVVIVAGDSDYIPLAQRIKRLGRYVIGIGIA---- 172

Query: 150 SMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182
              +  L    D F+    L   IARD     +
Sbjct: 173 GSTARSLAAACDEFVSYDDL-PGIARDEAAQTE 204


>gi|296129138|ref|YP_003636388.1| protein of unknown function DUF88 [Cellulomonas flavigena DSM
           20109]
 gi|296020953|gb|ADG74189.1| protein of unknown function DUF88 [Cellulomonas flavigena DSM
           20109]
          Length = 474

 Score = 93.9 bits (232), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 60/183 (32%), Gaps = 29/183 (15%)

Query: 7   KIALFIDGANLYASSKALG------FDIDYRKLLKAFRSR----AIVIRAYYYTTVVGDP 56
           + ALF+D  N+Y     L       F  D    L            + R +         
Sbjct: 12  RSALFVDFDNVYIGLARLDPRAAEAFATDPGHWLSELGQGSDVDGDLTRRFLVRA----C 67

Query: 57  EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGL 113
               S            GFQVV             ++ KSS D+ L +DA +        
Sbjct: 68  YLNPSVYSRFRPNFTRAGFQVVDCP-------SLTQQGKSSADINLVLDAVDALAAPTRY 120

Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
           +  VI S D  FT L    +   ++VTI++        A+   R  AD  +    L + +
Sbjct: 121 DEFVIVSADADFTPLAQRCRADDRRVTIITASP-----AASAYRSVADTVIGADALADLV 175

Query: 174 ARD 176
            + 
Sbjct: 176 TQT 178


>gi|47104079|ref|YP_015508.1| hypothetical protein PBPRC0054 [Photobacterium profundum SS9]
 gi|46911643|emb|CAG17992.1| conserved protein of unknown functions [Photobacterium profundum
           SS9]
          Length = 341

 Score = 93.9 bits (232), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 24/180 (13%), Positives = 58/180 (32%), Gaps = 31/180 (17%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M   + K+ALFID  N  +S        +   +L   ++         +        Q +
Sbjct: 1   MNTAQSKVALFIDADNASSS--------NLEFVLSELKNHGDTCIRKAFGNWKRPNLQSW 52

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG----LEHL 116
             +                K   E  +     + K++ D+ + +   +        ++ +
Sbjct: 53  EKILC--------------KNGIESVQQFDLTKNKNATDIAITISVMDFIHRKDLNVDTI 98

Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
            + + D  FT LV  +++    V       +        L+    +F+     + +I ++
Sbjct: 99  CLMTSDCDFTPLVTRVRQSGFNVICAGENKTPAP-----LKESCTHFICTEKSETKITKE 153


>gi|296284143|ref|ZP_06862141.1| hypothetical protein CbatJ_10981 [Citromicrobium bathyomarinum
           JL354]
          Length = 245

 Score = 93.9 bits (232), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 59/184 (32%), Gaps = 29/184 (15%)

Query: 1   MFDPR-EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
           M +   + IAL ID  N           ID   +L        V     Y     +    
Sbjct: 4   MTEETLKNIALLIDADN------TTPKGIDP--VLTVMAELGQVNIKRAYGNFAKNNLAN 55

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLV 117
           +  +            +   +  ++F    G    K++ D+ + +DA +      ++   
Sbjct: 56  WDKITH----------KYGIRPQQQFDLTAG----KNATDMAMTIDAIDLLYQGKVDGFG 101

Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
           I S D  FT LV  L++    V    +     +      +     F+D+  L    + + 
Sbjct: 102 IMSSDSDFTPLVTRLRQDGLVVYGFGST----NKTPAAFKSACTRFIDIDALIKGASDEQ 157

Query: 178 DEDK 181
           +  K
Sbjct: 158 ETPK 161


>gi|121594076|ref|YP_985972.1| hypothetical protein Ajs_1706 [Acidovorax sp. JS42]
 gi|120606156|gb|ABM41896.1| protein of unknown function DUF88 [Acidovorax sp. JS42]
          Length = 507

 Score = 93.9 bits (232), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 68/200 (34%), Gaps = 43/200 (21%)

Query: 4   PREKIALFIDGANLYASSKAL------GFDIDYRKLLKAFRSR-----------AIVIRA 46
           PR K ALF+D  N+++  + L       F    +  +                   ++  
Sbjct: 12  PRMKSALFVDFDNVFSGLRRLDPIAADHFASQPQSWMHWIAQSLEPPPHATAGARRLLVR 71

Query: 47  YYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA 106
             Y                     +  GF+++   A            K+S D+ + +D 
Sbjct: 72  RCYLNP--------QVYQRFRPAFNRAGFEIIDCPAM-------TSGGKTSTDIHMVLDI 116

Query: 107 FEQSEG---LEHLVIFSGDGCFTTLVAALQRKVKKVTI--VSTVLSDPSMASDQLRRQAD 161
            +  +     +  ++ S D  FT ++  L+R  ++ T+  +    +    ++D L  Q D
Sbjct: 117 VDLLQHQVHYDEFIVLSADADFTPVLRKLRRWDRRTTVLAIGFPSAAYQASADLLIDQ-D 175

Query: 162 YFMDLAYLKNEIARDPDEDK 181
            F     L+  + R+  E  
Sbjct: 176 AF-----LREALRREETETP 190


>gi|114764063|ref|ZP_01443302.1| hypothetical protein 1100011001333_R2601_15432 [Pelagibaca
           bermudensis HTCC2601]
 gi|114543421|gb|EAU46436.1| hypothetical protein R2601_15432 [Roseovarius sp. HTCC2601]
          Length = 236

 Score = 93.5 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 52/189 (27%), Gaps = 34/189 (17%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M +    +A+ ID  N   S K      D         S         Y          +
Sbjct: 1   MAEDTRLLAVLIDADN--TSPKYAKAIFD------EIASLGEASVRRVYGDFASQQISGW 52

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVI 118
           S +          G       A            K+S D+ L +DA +       +  V+
Sbjct: 53  SKI------SAEFGLVPHHSPA--------NTVGKNSSDISLVIDAMDLMHTGRFDGFVV 98

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA---- 174
            S D  FT L + ++ +   V  +           D  R+    F+ L  L         
Sbjct: 99  VSSDSDFTRLASRIREQGLDVYGMGMQK-----TPDAFRKACKRFIFLENLDGAPEQKTG 153

Query: 175 -RDPDEDKK 182
            R P    K
Sbjct: 154 DRAPRATGK 162


>gi|146283893|ref|YP_001174046.1| hypothetical protein PST_3576 [Pseudomonas stutzeri A1501]
 gi|145572098|gb|ABP81204.1| uncharacterized conserved protein [Pseudomonas stutzeri A1501]
          Length = 243

 Score = 93.5 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 21/147 (14%), Positives = 41/147 (27%), Gaps = 21/147 (14%)

Query: 37  FRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKS 96
                +      Y          +                   +  ++F    G    K+
Sbjct: 1   MAKYGVASVKRIYGDWTKPNLGSWKK----------VLLDHSIQPIQQFAYTSG----KN 46

Query: 97  SMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASD 154
           + D  L +DA +   +   +   + S D  FT L A ++ +   V       +     S 
Sbjct: 47  ATDSSLIIDAMDLLYTRRFDGFCLVSSDSDFTRLAARIREEGLTVYGFGEQKTPSPFVS- 105

Query: 155 QLRRQADYFMDLAYLKNEIARDPDEDK 181
                 D F+    L+ + A+   E  
Sbjct: 106 ----ACDKFIYTEILRADAAKASVEPP 128


>gi|306821460|ref|ZP_07455063.1| conserved hypothetical protein [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304550475|gb|EFM38463.1| conserved hypothetical protein [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 572

 Score = 93.5 bits (231), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 52/181 (28%), Gaps = 31/181 (17%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            D ++K A+ ID  N+               ++    +  +V     Y          + 
Sbjct: 1   MDDQKKYAVLIDAENIAYKYVKY--------IMGEMANYGVVTYKRAYMDWSAQNATGWK 52

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIF 119
                         +      +      G    K+S D  + +DA +   S+ ++   I 
Sbjct: 53  S----------VLLENAISPVQSIAYTSG----KNSTDSTIIIDAMDILYSKTVDGFCIV 98

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF--MDLAYLKNEIARDP 177
           S D  FT L   L+     V  +                  + F  ++L   K EI +  
Sbjct: 99  SSDSDFTKLATRLRESGMTVIGMGESK-----TPKAFIEACNSFKVLNLVVNKEEIEKSD 153

Query: 178 D 178
            
Sbjct: 154 K 154


>gi|167770975|ref|ZP_02443028.1| hypothetical protein ANACOL_02329 [Anaerotruncus colihominis DSM
           17241]
 gi|167667015|gb|EDS11145.1| hypothetical protein ANACOL_02329 [Anaerotruncus colihominis DSM
           17241]
          Length = 286

 Score = 93.2 bits (230), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 53/184 (28%), Gaps = 32/184 (17%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
              K A+ ID  N+         D   + +L    +  I      Y          +  +
Sbjct: 10  SDLKFAVLIDADNV--------SDKYIKIILDEISNDGIATYKRIYGDWTKPALVSWKSV 61

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSG 121
                              +++    G    K+S D  + +DA +   S  ++   I S 
Sbjct: 62  LLDNS----------ILPIQQYNYTTG----KNSTDSAMIIDAMDILYSGQVDGFCIVSS 107

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK---NEIARDPD 178
           D  FT L A L+     V  +                  + F  L  L      + +D D
Sbjct: 108 DSDFTRLAARLRESGMIVVGMGERK-----TPKSFISACNRFKYLDILAQAEPAVQKDED 162

Query: 179 EDKK 182
             ++
Sbjct: 163 CQRE 166


>gi|121583279|ref|YP_973715.1| hypothetical protein Pnap_4909 [Polaromonas naphthalenivorans CJ2]
 gi|120596537|gb|ABM39973.1| protein of unknown function DUF88 [Polaromonas naphthalenivorans
           CJ2]
          Length = 279

 Score = 93.2 bits (230), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 50/161 (31%), Gaps = 30/161 (18%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           ++A+ +D  N+                L+       V+    Y                L
Sbjct: 11  RVAVLVDCDNVTPEILEYA--------LRVIAQFGRVVLRRGYGN-----------HTTL 51

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124
            +       ++      ++    G    K++ D+ LA+DA E       +   + + D  
Sbjct: 52  ANKWQEALVRLAFTPCLQYQYASG----KNTADIALALDALEAMFDNRADTFCLVTSDSD 107

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165
           F  L   L+ +   V IV           D LR  +D F +
Sbjct: 108 FAYLCRKLRERGATVCIVGEAK-----TPDALRNASDQFFE 143


>gi|152983068|ref|YP_001352700.1| hypothetical protein mma_1010 [Janthinobacterium sp. Marseille]
 gi|151283145|gb|ABR91555.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 236

 Score = 92.8 bits (229), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 56/187 (29%), Gaps = 40/187 (21%)

Query: 1   MFDPRE---KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
           M +  +   ++A+ +D  N                 L+       V+    Y        
Sbjct: 1   MVENTKQNDRVAVLVDCDNTSPEILEYA--------LRVVAQFGRVVVRRGYGN------ 46

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEH 115
                   L +       ++      ++    G    K++ D+ LA+DA E       + 
Sbjct: 47  -----HATLANKWQEALVRLAFTPCLQYQYAAG----KNTSDIALALDALEDLFDHRADT 97

Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
             + + D  F  L   L+ +   V IV           D LR  +D F +         +
Sbjct: 98  YCLVTSDSDFAYLCRKLRERGATVCIVGEEK-----TPDALRNASDQFFEY-------QK 145

Query: 176 DPDEDKK 182
              E+ K
Sbjct: 146 PEVENAK 152


>gi|260574189|ref|ZP_05842194.1| protein of unknown function DUF88 [Rhodobacter sp. SW2]
 gi|259023655|gb|EEW26946.1| protein of unknown function DUF88 [Rhodobacter sp. SW2]
          Length = 246

 Score = 92.4 bits (228), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 61/165 (36%), Gaps = 37/165 (22%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
             +++A+ IDG NL A            +++    +   +     Y   +          
Sbjct: 15  KTQRVAVMIDGENLSAGLA--------GQIITKSLAFGRLTIKRVYGNAIR--------- 57

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSG 121
             L  W    GF+++                K++ D+ L ++A E      ++ LVI S 
Sbjct: 58  --LTQWEAAPGFRLI-----------HSGNGKNATDLLLCIEAMELVHSGLVDTLVIASS 104

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
           D  F+ L A L  K ++V  +         ASD  R+    F++L
Sbjct: 105 DRDFSHLAAHLCEKGQQVIGMGEAK-----ASDAFRKACTRFIEL 144


>gi|146276115|ref|YP_001166274.1| hypothetical protein Rsph17025_0057 [Rhodobacter sphaeroides ATCC
           17025]
 gi|145554356|gb|ABP68969.1| hypothetical protein Rsph17025_0057 [Rhodobacter sphaeroides ATCC
           17025]
          Length = 246

 Score = 92.4 bits (228), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 58/184 (31%), Gaps = 31/184 (16%)

Query: 1   MFDPR-EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
           M +PR  ++ + ID  N+ A+            + +   +         Y          
Sbjct: 1   MSEPRAPRLCVLIDADNVPANY--------AEAIFEEIAALGEASVRRIYGDWSA----- 47

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLV 117
                  L+        +     ++F+   G    K++ D+ L + A +   S   +  V
Sbjct: 48  -----MRLNAWAKKVAALGLVADQQFSNTKG----KNASDIGLVIAAMDFLHSGLFDGFV 98

Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
           + S D  FT L A ++ +   V  +           +  R     F+ +  L ++     
Sbjct: 99  LVSSDSDFTRLAARIREQGLDVYGIGEKK-----TPEAFRMACKRFIYVENLGSD-EPPA 152

Query: 178 DEDK 181
              +
Sbjct: 153 RGPR 156


>gi|154148166|ref|YP_001406735.1| hypothetical protein CHAB381_1180 [Campylobacter hominis ATCC
           BAA-381]
 gi|153804175|gb|ABS51182.1| protein containing DUF88 [Campylobacter hominis ATCC BAA-381]
          Length = 259

 Score = 92.4 bits (228), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 50/170 (29%), Gaps = 29/170 (17%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
            EK A+FID  N+              K+ +             Y          +    
Sbjct: 2   NEKYAIFIDAENVSYKY--------INKVFELINVYPEPAIRRIYGDFSSQNLLGYKDEI 53

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEH--LVIFSGD 122
                          K  ++F    G    K++ D+ L +D  E     +    +I S D
Sbjct: 54  ----------LSHALKPVQQFHSPNG----KNAADIALVIDIMEILNNTDIKNFIIVSSD 99

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
           G F +L   ++ K   V  +    +  +       +  D F  L   + E
Sbjct: 100 GDFASLAIKIREKGGFVIGIGENKTQIN-----FIKACDEFFYLNEPEPE 144


>gi|325109651|ref|YP_004270719.1| hypothetical protein Plabr_3100 [Planctomyces brasiliensis DSM
           5305]
 gi|324969919|gb|ADY60697.1| protein of unknown function DUF88 [Planctomyces brasiliensis DSM
           5305]
          Length = 441

 Score = 92.0 bits (227), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 58/178 (32%), Gaps = 25/178 (14%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           +IA+F+D  NL    K  G      +L++       +     Y        Q        
Sbjct: 6   RIAIFVDTENLTGWVKQHG----IVRLIEEIGQTGHLFVRKAYGCWEQGNLQVQQ----- 56

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDGC 124
              L+  GF++V                K+S D+ + +D  E       E +V+ +GD  
Sbjct: 57  -QVLNRCGFELV--------HTFHPVGGKNSADIRITIDVMETVLCHDFETIVLATGDSD 107

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182
           F+ L   L +  K +          S  SD +      ++    +       P +  K
Sbjct: 108 FSPLFRRLNQLGKHIIGA----GPHSPLSDSVASICQKYIY-TDVPPYATPKPAKPVK 160


>gi|210633171|ref|ZP_03297707.1| hypothetical protein COLSTE_01620 [Collinsella stercoris DSM 13279]
 gi|210159211|gb|EEA90182.1| hypothetical protein COLSTE_01620 [Collinsella stercoris DSM 13279]
          Length = 175

 Score = 92.0 bits (227), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 58/173 (33%), Gaps = 31/173 (17%)

Query: 1   MFDPRE--KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58
           MF+     + A+ ID  N+  S K +      + +L    +  +      Y         
Sbjct: 1   MFESTSELRFAVLIDADNI--SEKYV------KVVLDEISNAGVATYKRIYGDWTSPRLA 52

Query: 59  QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHL 116
            +     LLD              ++++   G    K++ D  + +DA +   S  ++  
Sbjct: 53  SWKS--CLLDNS--------IIPMQQYSYTYG----KNATDSAMIIDAMDILYSGTVDGF 98

Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
            I S D  FT LVA L+     V  +    +     S       + F  L  L
Sbjct: 99  AIVSSDSDFTRLVARLRESGMVVIGMGEQKTPKPFIS-----ACNQFKYLDLL 146


>gi|312196812|ref|YP_004016873.1| hypothetical protein FraEuI1c_2978 [Frankia sp. EuI1c]
 gi|311228148|gb|ADP81003.1| protein of unknown function DUF88 [Frankia sp. EuI1c]
          Length = 553

 Score = 91.6 bits (226), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 63/185 (34%), Gaps = 46/185 (24%)

Query: 7   KIALFIDGANLYASSKAL------GFDIDYRKLLKAFRS-----------RAIVIRAYYY 49
           + ALF+D  N++   + L       F ++ +  L    +           R  ++  Y Y
Sbjct: 15  RSALFVDFENIHMGLQRLDAAAANRFAVNPQCWLSWLETLAYPALGATDFRRDLLIRYCY 74

Query: 50  TTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE- 108
              V               +    GF VV                K+S D+ + +D  + 
Sbjct: 75  LNPVS--------SARYRAYFTRAGFHVVDCP-------PLTAAGKNSADIHIVIDVLDI 119

Query: 109 --QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY---- 162
                  + +++ S D  +T ++  L+   ++  I+++  S     +   R   D+    
Sbjct: 120 LGHPTRFDEVILLSADADYTPVMLRLRAHDRRTVIITSGPS-----ARAFRAACDHVVGE 174

Query: 163 --FMD 165
             F+D
Sbjct: 175 DAFID 179


>gi|257454371|ref|ZP_05619634.1| conserved hypothetical protein [Enhydrobacter aerosaccus SK60]
 gi|257448274|gb|EEV23254.1| conserved hypothetical protein [Enhydrobacter aerosaccus SK60]
          Length = 361

 Score = 91.6 bits (226), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 56/175 (32%), Gaps = 29/175 (16%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           IA+ IDG N+ A         +   +L    +   +     Y          +       
Sbjct: 11  IAVLIDGDNINA--------KNIESILAKVSTLGTIACKRIYGDFKQGKLTTWD------ 56

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE-GLEHLVIFSGDGCFT 126
                    +  K+  E        + K++ D+ LA+DA + S    +   I S D  F+
Sbjct: 57  --------DISLKLLLEQVHIPAYVKGKNATDIALAIDAVDLSYLDYDCFCIISSDSDFS 108

Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY-LKNEIARDPDED 180
            L   L+ K KKV          S   +  +   D +  +   +  E +    + 
Sbjct: 109 ILAKNLRTKGKKVFGFG-----KSTTVESFKVACDDYFVMDDTIPPEPSNSATKP 158


>gi|326791130|ref|YP_004308951.1| hypothetical protein Clole_2039 [Clostridium lentocellum DSM 5427]
 gi|326541894|gb|ADZ83753.1| Domain of unknown function DUF88 [Clostridium lentocellum DSM 5427]
          Length = 275

 Score = 91.6 bits (226), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 49/168 (29%), Gaps = 29/168 (17%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            ++KIA+ ID  N+         +   + ++    +  I      Y          +   
Sbjct: 3   KQDKIAVLIDAENV--------SNKYIKLIMDEVNNYGIATYKRVYGDYSNPSVMAW--- 51

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSG 121
                    N  +     A +     G    KS+ D  L +DA +   S  +    + S 
Sbjct: 52  -------MKNLEEYALTPALQCNYTSG----KSASDSALIIDAMDILYSGKVSAFCLVSS 100

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
           D  FT L   L+     V  +             L    + F  L  L
Sbjct: 101 DSDFTKLAMRLKEAGMNVIGMGEGK-----TPKSLVSACETFKYLDIL 143


>gi|323701153|ref|ZP_08112828.1| protein of unknown function DUF88 [Desulfotomaculum nigrificans DSM
           574]
 gi|323533755|gb|EGB23619.1| protein of unknown function DUF88 [Desulfotomaculum nigrificans DSM
           574]
          Length = 180

 Score = 91.2 bits (225), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 35/174 (20%), Positives = 64/174 (36%), Gaps = 16/174 (9%)

Query: 5   REKIALFIDGANLYASSKAL----GFDIDYRKLLKAFRSR--AIVIRAYYYTTVVGDPEQ 58
            +++ +FIDG N   +   L       IDY KL      +    + R YYYT    + +Q
Sbjct: 1   MKRVMVFIDGNNFEKAVTNLYGGSQQRIDYSKLANYLAGKRNGNLQRLYYYTAASDNDKQ 60

Query: 59  QFSPLHPLLDWLHYNGFQVVAK----VAKEFTENCGRKRVKSSMDVELAVDAFEQS--EG 112
           + +     +D L+      +AK           +      +   DV +AVD    +    
Sbjct: 61  KAASTKHFVDTLNKQVPNCIAKIGYLQVVGKDASGQDIYTEKGTDVNIAVDLVSLAFFNA 120

Query: 113 LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
            +  ++ S D  +   V   ++  K V ++  V       +  L+   D  + L
Sbjct: 121 YDEAILLSADTDYEPAVNMARQLGKTV-VLGIVDRQK---AGYLKGLCDDHISL 170


>gi|294339327|emb|CAZ87683.1| conserved hypothetical protein [Thiomonas sp. 3As]
          Length = 268

 Score = 91.2 bits (225), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 52/165 (31%), Gaps = 30/165 (18%)

Query: 3   DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
           D   ++A+ +D  N                 L+       V+    Y             
Sbjct: 20  DHESRVAVLVDCDNTTPEILEYA--------LRVVAQFGRVVLRRGYGN----------- 60

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFS 120
              L +       ++      +F    G    K++ D+ LA+DA E    +  +   + +
Sbjct: 61  HATLANKWQEALVRLAFTPCLQFQYAAG----KNTSDIALALDAVEALFDKRADTFCLVT 116

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165
            D  F  L   L+ +   V IV    S      D LR  +D F +
Sbjct: 117 SDSDFAYLCRKLRERGATVHIVGEAKSP-----DALRNASDQFFE 156


>gi|256810620|ref|YP_003127989.1| protein of unknown function DUF88 [Methanocaldococcus fervens AG86]
 gi|256793820|gb|ACV24489.1| protein of unknown function DUF88 [Methanocaldococcus fervens AG86]
          Length = 195

 Score = 91.2 bits (225), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 58/164 (35%), Gaps = 32/164 (19%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           +IAL IDG N+        F+ID  K+ +       ++    Y                L
Sbjct: 24  RIALLIDGPNM----LRKEFNIDLDKIREVLSEFGDIVIGRVYLN--------QYASDKL 71

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124
           ++ +   GF+                     +DVE+AVDA E      ++ +   + D  
Sbjct: 72  IEAVINQGFEPKI--------------SAGDVDVEMAVDATELVFNPNIDTIAYVTRDAD 117

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
           F   +   + + KKV ++          S  L+  ADY + +  
Sbjct: 118 FLPAIRKAKERGKKVIVIGAEPGF----STALQNIADYVIKIGE 157


>gi|15668658|ref|NP_247457.1| hypothetical protein MJ_0482 [Methanocaldococcus jannaschii DSM
           2661]
 gi|2496000|sp|Q57905|Y482_METJA RecName: Full=Uncharacterized protein MJ0482
 gi|1591185|gb|AAB98473.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
           2661]
          Length = 240

 Score = 91.2 bits (225), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 58/164 (35%), Gaps = 32/164 (19%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           +IAL IDG N+        F+ID  K+ +       ++    Y                L
Sbjct: 71  RIALLIDGPNM----LRKEFNIDLDKIREVLSEFGDIVIGRVYLN--------QYASDKL 118

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124
           ++ +   GF+                     +DVE+AVDA E      ++ +   + D  
Sbjct: 119 IEAVINQGFEPKI--------------SAGDVDVEMAVDATELVFNPNIDTIAYVTRDAD 164

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
           F   +   + + KKV ++          S  L+  ADY + +  
Sbjct: 165 FLPAIRKAKERGKKVIVIGAEPGF----STALQNIADYVIKIGE 204


>gi|254427448|ref|ZP_05041155.1| hypothetical protein ADG881_678 [Alcanivorax sp. DG881]
 gi|196193617|gb|EDX88576.1| hypothetical protein ADG881_678 [Alcanivorax sp. DG881]
          Length = 235

 Score = 90.8 bits (224), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 52/172 (30%), Gaps = 29/172 (16%)

Query: 12  IDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLH 71
           ID  N           +D   L +             Y          +           
Sbjct: 2   IDADN------TPPKIVD--GLFEEIAKFGTASVKRIYGDWTKPNLGGWKS--------- 44

Query: 72  YNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLV 129
                V+ K + +  +     + K++ D  + +DA +   ++ L    + S D  FT L 
Sbjct: 45  -----VLLKHSVQPIQQFAYTQGKNATDCSMIIDAMDLLYTKQLSGFCLVSSDSDFTRLA 99

Query: 130 AALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
           A L+ +   V       +     +       D F+    L+++ A +   DK
Sbjct: 100 ARLREEGLTVYGFGERKTPGPFVA-----ACDKFIYTEVLRSDHAPESTSDK 146


>gi|291559982|emb|CBL38782.1| Uncharacterized conserved protein [butyrate-producing bacterium
           SSC/2]
          Length = 315

 Score = 90.8 bits (224), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 57/183 (31%), Gaps = 32/183 (17%)

Query: 1   MFDPREK-IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
           M +  +   A+ ID  N+  S K            +   +         Y          
Sbjct: 1   MIEEEKNQFAVLIDADNI--SPKYAPIIF------QELEAYGFPSCRRIYGNWSKANG-- 50

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLV 117
                    W      +      ++F+   G    K++ D+ + +DA +    + ++   
Sbjct: 51  ---------WNEELLLEYSIIPVQQFSYTSG----KNATDMAMVIDAMDLLYGKKVDGFC 97

Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
           I + D  FT L   L+ +   V  +             L R  + F+ L  L  E  R  
Sbjct: 98  IVTSDSDFTRLAMRLREEHMYVIGMGESK-----TPVALTRACNKFIHL-NLIYEADRGK 151

Query: 178 DED 180
           +ED
Sbjct: 152 EED 154


>gi|313904540|ref|ZP_07837916.1| protein of unknown function DUF88 [Eubacterium cellulosolvens 6]
 gi|313470682|gb|EFR66008.1| protein of unknown function DUF88 [Eubacterium cellulosolvens 6]
          Length = 283

 Score = 90.8 bits (224), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 56/176 (31%), Gaps = 29/176 (16%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            +   + A+ ID  N+         +   + +L    +  I      Y          + 
Sbjct: 1   MENELRYAVLIDADNV--------SEKYIKIILDETANSGIATYKRIYGDWTSARMASWK 52

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIF 119
            +                   ++++   G    K++ D  + +DA +   S  ++   I 
Sbjct: 53  KVLLDNS----------IIPIQQYSYTTG----KNATDSAMIIDAMDILYSNTVDGFCIV 98

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
           S D  FT LVA L+    KV  +    +     S       + F  L  L ++  +
Sbjct: 99  SSDSDFTRLVARLREAGHKVIGMGESKTPQPFIS-----ACNQFKYLDMLYDQRQQ 149


>gi|167766019|ref|ZP_02438072.1| hypothetical protein CLOSS21_00511 [Clostridium sp. SS2/1]
 gi|317499424|ref|ZP_07957691.1| hypothetical protein HMPREF0996_02675 [Lachnospiraceae bacterium
           5_1_63FAA]
 gi|167712099|gb|EDS22678.1| hypothetical protein CLOSS21_00511 [Clostridium sp. SS2/1]
 gi|316893296|gb|EFV15511.1| hypothetical protein HMPREF0996_02675 [Lachnospiraceae bacterium
           5_1_63FAA]
          Length = 319

 Score = 90.8 bits (224), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 57/183 (31%), Gaps = 32/183 (17%)

Query: 1   MFDPREK-IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
           M +  +   A+ ID  N+  S K            +   +         Y          
Sbjct: 5   MIEEEKNQFAVLIDADNI--SPKYAPIIF------QELEAYGFPSCRRIYGNWSKANG-- 54

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLV 117
                    W      +      ++F+   G    K++ D+ + +DA +    + ++   
Sbjct: 55  ---------WNEELLLEYSIIPVQQFSYTSG----KNATDMAMVIDAMDLLYGKKVDGFC 101

Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
           I + D  FT L   L+ +   V  +             L R  + F+ L  L  E  R  
Sbjct: 102 IVTSDSDFTRLAMRLREEHMYVIGMGESK-----TPVALTRACNKFIHL-NLIYEADRGK 155

Query: 178 DED 180
           +ED
Sbjct: 156 EED 158


>gi|134298416|ref|YP_001111912.1| hypothetical protein Dred_0543 [Desulfotomaculum reducens MI-1]
 gi|134051116|gb|ABO49087.1| protein of unknown function DUF88 [Desulfotomaculum reducens MI-1]
          Length = 180

 Score = 90.8 bits (224), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 35/174 (20%), Positives = 65/174 (37%), Gaps = 16/174 (9%)

Query: 5   REKIALFIDGANLYASSKAL----GFDIDYRKLLKAFRSR--AIVIRAYYYTTVVGDPEQ 58
            +++ +FIDG N   +   L       IDY KL      +    + R YYYT    + +Q
Sbjct: 1   MKRVMVFIDGNNFEKAVTNLYSGSQQRIDYSKLANYLAGKRNGNLQRLYYYTAASNNDKQ 60

Query: 59  QFSPLHPLLDWLHYNGFQVVAK----VAKEFTENCGRKRVKSSMDVELAVDAFEQS--EG 112
           + +     +D L+      +AK           +      +   DV +AVD    +    
Sbjct: 61  KAASTKNFVDTLNKQVPNCIAKIGYLQVVGKDASGQDIYTEKGTDVNIAVDLVSLAFFNA 120

Query: 113 LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
            +  ++ S D  +   V  +++  K V ++  V       +  L+   D  + L
Sbjct: 121 YDEAILLSADTDYEPAVNMVRQFGKTV-VLGIVDRQK---AGYLKGLCDDHISL 170


>gi|256826985|ref|YP_003150944.1| hypothetical protein Ccur_05410 [Cryptobacterium curtum DSM 15641]
 gi|256583128|gb|ACU94262.1| Protein of unknown function DUF88 [Cryptobacterium curtum DSM
           15641]
          Length = 312

 Score = 90.1 bits (222), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 53/175 (30%), Gaps = 30/175 (17%)

Query: 1   MFDPREK--IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58
           M D  E+   AL ID  N+  S+K +   ++     +       V     Y         
Sbjct: 1   MPDQTERKPFALLIDSDNV--SAKYIQGIMN-----ELTSRHGQVTYRRIYGDWTSSQMG 53

Query: 59  QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHL 116
           ++                      ++F    G    K++ D  L +DA +      +E  
Sbjct: 54  KWK----------DVLADYSLTPMQQFPNTKG----KNATDSFLIIDAMDILYEGKIEGF 99

Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
            I S DG FT L + L+     V  +              R     F  L  L +
Sbjct: 100 CIVSSDGDFTRLASRLRDAGMTVVGMGEQK-----TPRSFRSACTVFTGLELLID 149


>gi|260428850|ref|ZP_05782827.1| conserved hypothetical protein [Citreicella sp. SE45]
 gi|260419473|gb|EEX12726.1| conserved hypothetical protein [Citreicella sp. SE45]
          Length = 236

 Score = 90.1 bits (222), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 47/171 (27%), Gaps = 29/171 (16%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M      +A+ ID  N   S K      D         S         Y          +
Sbjct: 1   MPSENRLLAILIDADN--TSPKYAKAIFD------EIASLGEASVRRVYGDFSSQQMAGW 52

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVI 118
           S +            +           +      K++ D+ L +DA +       +  V+
Sbjct: 53  SKITA----------EYGLVPL----HSPANTVGKNASDISLVIDAMDLMHTARFDGFVL 98

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
            S D  FT L + ++ +      +           D  R+    F+ L  L
Sbjct: 99  VSSDSDFTRLASRIREQGLDAYGMGMQK-----TPDAFRKACKRFIFLENL 144


>gi|332524909|ref|ZP_08401095.1| hypothetical protein RBXJA2T_03833 [Rubrivivax benzoatilyticus JA2]
 gi|332108204|gb|EGJ09428.1| hypothetical protein RBXJA2T_03833 [Rubrivivax benzoatilyticus JA2]
          Length = 263

 Score = 90.1 bits (222), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 52/171 (30%), Gaps = 34/171 (19%)

Query: 1   MFDPRE----KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP 56
           M + ++    ++A+ +D  N                 L+       V+    Y       
Sbjct: 1   MSEKKDAGEGRVAVLVDCDNTTPEVLEHA--------LRVVAQFGRVVLRRGYGN----- 47

Query: 57  EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLE 114
                    L +       ++      ++    G    K++ D+ LA+DA E       +
Sbjct: 48  ------HTTLANRWQDALVRLAFTPCLQYQYAAG----KNTSDIALALDAIEALFDRRAD 97

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165
              + + D  F  L   L+ +   V IV             LR  +D F +
Sbjct: 98  TFCLVTSDSDFAYLCRKLRERGATVHIVGESK-----TPAALRNASDQFFE 143


>gi|261402330|ref|YP_003246554.1| protein of unknown function DUF88 [Methanocaldococcus vulcanius M7]
 gi|261369323|gb|ACX72072.1| protein of unknown function DUF88 [Methanocaldococcus vulcanius M7]
          Length = 216

 Score = 90.1 bits (222), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 58/164 (35%), Gaps = 32/164 (19%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           +IAL IDG N+        F+ID  K+ +       ++    Y                L
Sbjct: 38  RIALLIDGPNM----LRKEFNIDLDKIREVLNEFGDIVIGRVYLN--------QYASDKL 85

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124
           ++ +   GF+                     +DVE+AVDA E      ++ +   + D  
Sbjct: 86  IEAVINQGFEPKI--------------SAGDVDVEMAVDATELVFNPNIDTIAYVTRDAD 131

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
           F   +   + + KKV ++          S  L+  ADY + +  
Sbjct: 132 FLPAIRKAKERGKKVIVIGAEPGF----STALQNIADYVIKIGE 171


>gi|289193218|ref|YP_003459159.1| protein of unknown function DUF88 [Methanocaldococcus sp. FS406-22]
 gi|288939668|gb|ADC70423.1| protein of unknown function DUF88 [Methanocaldococcus sp. FS406-22]
          Length = 202

 Score = 89.7 bits (221), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 58/164 (35%), Gaps = 32/164 (19%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           +IAL IDG N+        F+ID  K+ +       ++    Y                L
Sbjct: 24  RIALLIDGPNM----LRKEFNIDLDKIREVLSEFGDIVIGRVYLN--------QYASDKL 71

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124
           ++ +   GF+                     +DVE+AVDA E      ++ +   + D  
Sbjct: 72  IEAVINQGFEPKI--------------SAGDVDVEMAVDATELVFNPNIDTIAYVTRDAD 117

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
           F   +   + + KKV ++          S  L+  ADY + +  
Sbjct: 118 FLPAIRKAKERGKKVIVIGAEPGF----STALQNIADYVIKIGE 157


>gi|171060518|ref|YP_001792867.1| hypothetical protein Lcho_3848 [Leptothrix cholodnii SP-6]
 gi|170777963|gb|ACB36102.1| protein of unknown function DUF88 [Leptothrix cholodnii SP-6]
          Length = 461

 Score = 89.7 bits (221), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 68/188 (36%), Gaps = 26/188 (13%)

Query: 7   KIALFIDGANLYASSKAL------GFDIDYRKLLKAFRSR----AIVIRAYYYTTVVGDP 56
           K ALF+D  N+Y+  + L       F     + ++                    +V   
Sbjct: 2   KSALFVDFDNVYSGLRKLDPTIADRFSRQPLRWVEWLLDDLPPPEHAPDGARRRLLVRRV 61

Query: 57  EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG---L 113
                         ++ GF+++   A            K+S D+ + +D  +  +     
Sbjct: 62  YLNPQVYQRYRAAFNHAGFEIIDCPAM-------TSEGKTSTDIHMVLDMVDLLQHQVHY 114

Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA-YLKNE 172
           +  ++FS D  FT ++  L+R  ++ T+++         S   R  AD  +D   +L++ 
Sbjct: 115 DEFIVFSADADFTPVLRKLRRWDRRTTVLAVGFP-----SAAYRASADLLIDTDLFLRDA 169

Query: 173 IARDPDED 180
           I     ED
Sbjct: 170 IGVREAED 177


>gi|113869183|ref|YP_727672.1| hypothetical protein H16_A3229 [Ralstonia eutropha H16]
 gi|113527959|emb|CAJ94304.1| conserved hypothetical protein [Ralstonia eutropha H16]
          Length = 265

 Score = 89.7 bits (221), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 53/161 (32%), Gaps = 30/161 (18%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           ++A+ +D  N           +DY   L+       V+    Y         Q +     
Sbjct: 11  RVAVLVDCDN------TTPEILDYA--LRVVAQFGRVVLRRGYGN-------QSTLGKTW 55

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124
            + L    F        ++    G    K++ D+ LA+DA E       +   + + D  
Sbjct: 56  QEALVRQAFT----PCLQYQYAAG----KNTADIALALDALEAMFDHRADKFCLVTSDSD 107

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165
           F  L   L+ +   V IV           + LR  +D F +
Sbjct: 108 FAYLCRKLRERGATVCIVGESK-----TPEALRNASDQFFE 143


>gi|323698514|ref|ZP_08110426.1| hypothetical protein DND132_1098 [Desulfovibrio sp. ND132]
 gi|323458446|gb|EGB14311.1| hypothetical protein DND132_1098 [Desulfovibrio desulfuricans
           ND132]
          Length = 241

 Score = 88.9 bits (219), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 26/178 (14%), Positives = 53/178 (29%), Gaps = 29/178 (16%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
            + IALFID  N      A    I++  +L        +     Y     +  + +    
Sbjct: 7   EQHIALFIDADN------APAKFIEF--ILTDLAKYGSLAIRRAYGNWKNEYLKGW---- 54

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLE--HLVIFSGD 122
                     F    +  ++F       + K++ D+ + +DA +     +     + S D
Sbjct: 55  ------EECLFDKAIQPVQQFD----MTKGKNATDMAMTIDAMDILYQKDIGVFGLVSSD 104

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
             F  L   L+ + K V    +  +  +            F  L     +      + 
Sbjct: 105 CDFAPLATRLRAEGKTVVGYGSRQTPEAFT-----NACSTFSYLDDKPQDQPEAQPKP 157


>gi|163746469|ref|ZP_02153827.1| hypothetical protein OIHEL45_13730 [Oceanibulbus indolifex HEL-45]
 gi|161380354|gb|EDQ04765.1| hypothetical protein OIHEL45_13730 [Oceanibulbus indolifex HEL-45]
          Length = 232

 Score = 88.5 bits (218), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 55/164 (33%), Gaps = 29/164 (17%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           +A+ ID  N+   +K  G       +++   +         Y     D  + +       
Sbjct: 9   LAVLIDADNVP--AKHAG------AIMREVTTIGEPALRRVYGDWSNDHLKGWKAPIR-- 58

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDGCF 125
                   ++     +E     G    K++ D+ L + A +   S   + +VI S D  F
Sbjct: 59  --------ELGLVAHQETANTKG----KNASDIGLVIQAMDILHSRRFDIIVIVSSDSDF 106

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
           T LV  L+     V  +           D LR   + F+ +  L
Sbjct: 107 TALVNRLREDGVTVIGIGEKK-----THDSLRNVYNRFILIENL 145


>gi|296109488|ref|YP_003616437.1| protein of unknown function DUF88 [Methanocaldococcus infernus ME]
 gi|295434302|gb|ADG13473.1| protein of unknown function DUF88 [Methanocaldococcus infernus ME]
          Length = 173

 Score = 88.5 bits (218), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 59/163 (36%), Gaps = 32/163 (19%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           KIAL IDG N+        F+ID  K+ +       ++    Y                L
Sbjct: 24  KIALLIDGPNM----LRKEFNIDLDKIREILSEFGDIVIGRVYLN--------QYASEKL 71

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124
           ++ +   GF+                     +DVE+AVDA E      ++ +   + D  
Sbjct: 72  IEAVINQGFEPKI--------------SAGDVDVEMAVDATELVFNPNIDTIAYVTRDAD 117

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
           F   +   + K KK+ ++          S  L++ ADY + + 
Sbjct: 118 FLPAIRKAKEKGKKIIVIGAEPGF----SKALQKIADYVIKIN 156


>gi|206896404|ref|YP_002247532.1| hypothetical protein COPRO5265_1226 [Coprothermobacter
           proteolyticus DSM 5265]
 gi|206739021|gb|ACI18099.1| protein of unknown function [Coprothermobacter proteolyticus DSM
           5265]
          Length = 321

 Score = 88.5 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 42/175 (24%), Positives = 72/175 (41%), Gaps = 22/175 (12%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDID--YRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
             P +  A+F+D  NL  S +          +K+L  F S   +  A  YT         
Sbjct: 1   MQPCKHFAIFLDLENLAKSLEKYDKTPQELLQKILDTFVSMGKIDVARVYTG-------- 52

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHL 116
           +     L+ +    G++VV      +    G   VK+  D+++ VDA +     + ++  
Sbjct: 53  WGVFASLIPFAVDMGYEVVF----VYAHRSG-SVVKNMADMQITVDALKLGYERDSIDAF 107

Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
           V  S D  F  ++ ALQ   K+V ++     D  + S+ L+  AD F+ L  L  
Sbjct: 108 VFVSADRDFIPVIKALQGLGKEVVVI----GDEQITSEALKNTADAFVSLNELAG 158


>gi|150003300|ref|YP_001298044.1| hypothetical protein BVU_0716 [Bacteroides vulgatus ATCC 8482]
 gi|160890159|ref|ZP_02071162.1| hypothetical protein BACUNI_02599 [Bacteroides uniformis ATCC 8492]
 gi|149931724|gb|ABR38422.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
 gi|156860547|gb|EDO53978.1| hypothetical protein BACUNI_02599 [Bacteroides uniformis ATCC 8492]
          Length = 240

 Score = 88.5 bits (218), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 46/162 (28%), Gaps = 29/162 (17%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           IA+ IDG N+               ++         +    Y             L    
Sbjct: 11  IAVLIDGDNVSFER--------MEDIMGFVSRYGDAVIRRIYGDWT------RKALSGWK 56

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCF 125
           +     GF++V        +       K++ D+ L +DA +      ++   + + DG +
Sbjct: 57  ETAREYGFRLV--------QASSYASGKNTTDIALVIDAMDILRDGRVDCFCLVASDGDY 108

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
             L   ++    KV                L R    F+   
Sbjct: 109 NPLAQRIREAGLKVLGYGEGK-----TPVSLIRSCSVFLYAD 145


>gi|226226060|ref|YP_002760166.1| hypothetical protein GAU_0654 [Gemmatimonas aurantiaca T-27]
 gi|226089251|dbj|BAH37696.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
          Length = 728

 Score = 88.2 bits (217), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 34/176 (19%), Positives = 59/176 (33%), Gaps = 23/176 (13%)

Query: 10  LFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDW 69
           L ID  N+    ++     + + LL +   +  V     Y          +      +  
Sbjct: 17  LLIDFDNVTMGIRS-DLQEELKNLLSSDIVKGKVAVRRAYA--------DWRRYPQYIVP 67

Query: 70  LHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGCFT 126
           L      ++   A            K++ D+ LA+DA E       +   V+ SGD  F+
Sbjct: 68  LTEASIDLIFAPA-------YGSSKKNATDIRLAIDALELVFTRPEIGTFVLLSGDSDFS 120

Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182
           ++V  L+   K V  V         +SD L    D +     L   +    DE  +
Sbjct: 121 SMVIKLKEYGKYVIGVGI----RESSSDLLVMNCDEYYSYNALAGLVKTGEDETTR 172


>gi|255012325|ref|ZP_05284451.1| hypothetical protein B2_00320 [Bacteroides sp. 2_1_7]
          Length = 240

 Score = 88.2 bits (217), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 46/162 (28%), Gaps = 29/162 (17%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           IA+ IDG N+               ++         +    Y             L    
Sbjct: 11  IAVLIDGDNVSFER--------MEDIMGFVSRYGDAVIRRIYGDWT------RKALSGWK 56

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCF 125
           +     GF++V        +       K++ D+ L +DA +      ++   + + DG +
Sbjct: 57  ETAREYGFRLV--------QASSYASGKNTTDIALVIDAMDILRDGRVDCFCLVASDGDY 108

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
             L   ++    KV                L R    F+   
Sbjct: 109 NPLAQRIREAGLKVLGYGEGK-----TPVSLIRSCSVFLYAD 145


>gi|282899804|ref|ZP_06307766.1| hypothetical protein CRC_01671 [Cylindrospermopsis raciborskii
           CS-505]
 gi|281195286|gb|EFA70221.1| hypothetical protein CRC_01671 [Cylindrospermopsis raciborskii
           CS-505]
          Length = 439

 Score = 88.2 bits (217), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 38/164 (23%), Positives = 63/164 (38%), Gaps = 15/164 (9%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRA-YYYTTVVGDPEQQFSPLHPL 66
            A+F D  NL   +K   F  D+ K L   +    ++         +      +S     
Sbjct: 6   TAIFYDIENL---TKGYSFSKDFIKELSLKQIYRQILEVDIVNKICLQRAYANWSDHR-- 60

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDG 123
           L  L     ++     + F     R   K++ D++L VD  + +     +E  VI SGDG
Sbjct: 61  LSLLRGEINELGIDPIQIF--GFARYHKKNAADIQLVVDTMDITIRFPHIEVYVIVSGDG 118

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
            F +L   L    K+V   +      + A+D  +   DYF+ L 
Sbjct: 119 GFASLAKKLHEYGKQVIGCA----YENSANDIFKSVCDYFIKLE 158


>gi|163845962|ref|YP_001634006.1| hypothetical protein Caur_0367 [Chloroflexus aurantiacus J-10-fl]
 gi|222523687|ref|YP_002568157.1| hypothetical protein Chy400_0393 [Chloroflexus sp. Y-400-fl]
 gi|163667251|gb|ABY33617.1| protein of unknown function DUF88 [Chloroflexus aurantiacus
           J-10-fl]
 gi|222447566|gb|ACM51832.1| protein of unknown function DUF88 [Chloroflexus sp. Y-400-fl]
          Length = 208

 Score = 88.2 bits (217), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 66/179 (36%), Gaps = 16/179 (8%)

Query: 7   KIALFIDGANL------YASSKALGF--DIDYRKLLKAF---RSRAIVIRAYYYTTVVGD 55
           +I +F DG+        + S K +G+   + + +L++ F   + +        Y +    
Sbjct: 6   RIGVFYDGSYFTYAQFYFYSEKKVGWLSFVPFHRLIEQFVSSKEQRYAAHRVVYASWHQG 65

Query: 56  PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGL 113
                                +V    +           +  +DV LA+DA E++    +
Sbjct: 66  LFHSAQTSEKQFQIERNRHIDLVHAGIEPKYVPMPPNGQEKGVDVSLAIDAMERAMEGKI 125

Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMAS---DQLRRQADYFMDLAYL 169
           +  V+ +GDG  T LV AL +   +V ++          S    +L    +Y +++  L
Sbjct: 126 DVAVLVTGDGDLTPLVRALMKHGVRVGLLYFEYESSQRTSHVNRRLLDACNYALNVNQL 184


>gi|217968493|ref|YP_002353727.1| hypothetical protein Tmz1t_0028 [Thauera sp. MZ1T]
 gi|217505820|gb|ACK52831.1| protein of unknown function DUF88 [Thauera sp. MZ1T]
          Length = 509

 Score = 88.2 bits (217), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 64/173 (36%), Gaps = 23/173 (13%)

Query: 7   KIALFIDGANLYASSKALGFDI------DYRKLLKAFRSRAIVI----RAYYYTTVVGDP 56
           K ALF+D  N+Y+  + L   I         + +    S+  +            +V   
Sbjct: 2   KSALFVDFDNVYSGLRKLDQAIADRFARQPLEWMHWIISKLELPDHSPEGARRRVLVRRC 61

Query: 57  EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG---L 113
                         +  GF+++   A            K+S D+ + +D  +  +     
Sbjct: 62  YLNPQAYQRFRPSFNLAGFEIIDCPAL-------TSEGKTSTDIHMVLDIIDLLQHETHY 114

Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTI--VSTVLSDPSMASDQLRRQADYFM 164
           +  ++FS D  FT ++  L+R  ++ T+  +    +    ++D L  Q D F+
Sbjct: 115 DEFIVFSADADFTPVLRKLRRWDRRTTVLAIGFPSAAYRASADLLIDQ-DEFV 166


>gi|85708688|ref|ZP_01039754.1| hypothetical protein NAP1_05595 [Erythrobacter sp. NAP1]
 gi|85690222|gb|EAQ30225.1| hypothetical protein NAP1_05595 [Erythrobacter sp. NAP1]
          Length = 240

 Score = 88.2 bits (217), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 53/166 (31%), Gaps = 29/166 (17%)

Query: 6   EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
           + IAL ID  N           ID   +L        V     Y     D   ++  +  
Sbjct: 7   KNIALLIDADN------TTPEGIDP--VLTVMAELGQVNIRRAYGNFAKDNLARWDKITN 58

Query: 66  LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDG 123
                     +   +  ++F  + G    K++ D+ + +DA +      ++   I + D 
Sbjct: 59  ----------RFGIRPQQQFDVSKG----KNATDMAMTIDAIDLLYQGKVDGFGIMTSDS 104

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
            FT LV  L++    V                 +     F+D+  L
Sbjct: 105 DFTPLVTRLRQDGIIVYGFGEAK-----TPQAFKSVCTRFIDIKQL 145


>gi|22299967|ref|NP_683214.1| hypothetical protein tll2424 [Thermosynechococcus elongatus BP-1]
 gi|22296152|dbj|BAC09976.1| tll2424 [Thermosynechococcus elongatus BP-1]
          Length = 620

 Score = 87.8 bits (216), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 67/182 (36%), Gaps = 13/182 (7%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
              K A+  D  NL  +    G  +D  K+     S   ++ +   T  +G+   + +  
Sbjct: 157 NTLKTAVLYDIENLVFNQ---GQRLDPAKV-NELVSLDKILESIKSTIDLGEIAIKRAYG 212

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGL---EHLVIFS 120
           +     L     Q+     +  +     +  +++ D++LA+DA +           V+ S
Sbjct: 213 NWQNKTLQALNDQLKRSQIQPVSVYGHNRDQRNAADIQLALDAIDLIHHYPDINTFVLIS 272

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
           GDG F ++   L+   K V   +      + AS   ++    F+ L      I   P  +
Sbjct: 273 GDGGFGSIALRLRDYGKTVIGCA----YWNAASLSFQKVCHQFIFLEN--PFIDSPPTTN 326

Query: 181 KK 182
            +
Sbjct: 327 GR 328


>gi|219850648|ref|YP_002465081.1| hypothetical protein Cagg_3809 [Chloroflexus aggregans DSM 9485]
 gi|219544907|gb|ACL26645.1| protein of unknown function DUF88 [Chloroflexus aggregans DSM 9485]
          Length = 319

 Score = 87.4 bits (215), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 37/186 (19%), Positives = 70/186 (37%), Gaps = 31/186 (16%)

Query: 4   PREKI------ALFIDGANLYASSKALGF------DIDYRKLLKAFRSRAIVIRAYYYTT 51
           P E+       A+F D  NL    K  GF      ++  +++L A R    +        
Sbjct: 14  PMERTPMPFNTAIFYDIENL---IKGYGFSTQTITNVSLKEILTALRQTGKIGHIAVQRA 70

Query: 52  VVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS- 110
                + +   +   ++       ++     + F     R+  +++ DV+LA+DA + + 
Sbjct: 71  YANWSDPRLGVMRDEIN-------ELGIDPIQVF--GFAREPKRNAADVQLAIDAIDLAY 121

Query: 111 --EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
              GL+  VI SGDG F  L   L    K V   +      S  +   +   D F+ +  
Sbjct: 122 IRPGLDVFVIVSGDGGFAALAKKLHEYGKTVIGCA----YRSAVNKTFQAVCDEFVWITD 177

Query: 169 LKNEIA 174
            + ++ 
Sbjct: 178 TEEKVQ 183


>gi|221070110|ref|ZP_03546215.1| protein of unknown function DUF88 [Comamonas testosteroni KF-1]
 gi|220715133|gb|EED70501.1| protein of unknown function DUF88 [Comamonas testosteroni KF-1]
          Length = 157

 Score = 87.4 bits (215), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 50/174 (28%), Gaps = 34/174 (19%)

Query: 1   MFDP---REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
           M +P     ++A+ ID  N+  +  A        +L+     R        Y        
Sbjct: 1   MQNPFITAPRLAVLIDAENISPAWSA--------QLMAQVAERGAATIRRAYADWTSPYL 52

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE----GL 113
             +                +  +  ++F       R K++ D  L +DA E        +
Sbjct: 53  ASWKKPLN----------ALAIRPCQQFNY----TRRKNATDSALIMDAMELLHARERRV 98

Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
           +   I S D  +T L   ++ +   +             +         FM L 
Sbjct: 99  DGFCIVSSDSDYTGLAGRIREQGLLIYGYG-----KQDTAASFVAACHAFMFLD 147


>gi|229541784|ref|ZP_04430844.1| protein of unknown function DUF88 [Bacillus coagulans 36D1]
 gi|229326204|gb|EEN91879.1| protein of unknown function DUF88 [Bacillus coagulans 36D1]
          Length = 179

 Score = 87.0 bits (214), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 37/173 (21%), Positives = 69/173 (39%), Gaps = 15/173 (8%)

Query: 5   REKIALFIDGANLYASSKAL---GFDIDYRKLLKA--FRSRAIVIRAYYYTTVVGDPEQQ 59
            +++ +FIDG N  A+  AL      +DY KL +    R   I+ R YYYT V    +++
Sbjct: 1   MKRVMVFIDGNNFEAALTALYGSQQRLDYLKLAEYVAARRDGILQRIYYYTAVGSLDKEK 60

Query: 60  FSPLHPLLDWLHYNGFQVVAKV----AKEFTENCGRKRVKSSMDVELAVDAFEQSEG--L 113
            +     +D L+    + +AK+                 +   DV +AVD    +     
Sbjct: 61  AAATKLFIDHLNKKVPKCIAKLGYLSVVGINALGKPIFTEKGTDVNIAVDLVSLAFNNGY 120

Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
           +  ++FS D  +   +   +   K V +   V       +  ++   D ++ L
Sbjct: 121 DEAILFSADTDYEAAIKMARSLGKNV-VAGVVDQQK---AGYMKDLCDEYITL 169


>gi|257456927|ref|ZP_05622108.1| conserved hypothetical protein [Treponema vincentii ATCC 35580]
 gi|257445636|gb|EEV20698.1| conserved hypothetical protein [Treponema vincentii ATCC 35580]
          Length = 311

 Score = 87.0 bits (214), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 23/169 (13%), Positives = 47/169 (27%), Gaps = 34/169 (20%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
             K  L IDG N+  S            ++        ++    Y          +    
Sbjct: 2   DRKYVLLIDGDNIPPSF--------LEAIITEVSKEGELLIKRLYGDWTTPNMNGWKNWL 53

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG---LEHLVIFSG 121
                      ++  +  ++F          ++ D  + +DA E +     +  + I S 
Sbjct: 54  E----------KIPIRPVQQFRNGP------NATDNTIIMDAIELANTNKSINAVCIVST 97

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL-RRQADYFMDLAYL 169
           D  + +L   L+     V  +          +  L     + F  L  L
Sbjct: 98  DSDYYSLALKLREYGLYVLGIG------KQTAKALWVNACNEFKYLENL 140


>gi|126655888|ref|ZP_01727327.1| hypothetical protein CY0110_19792 [Cyanothece sp. CCY0110]
 gi|126623367|gb|EAZ94072.1| hypothetical protein CY0110_19792 [Cyanothece sp. CCY0110]
          Length = 103

 Score = 87.0 bits (214), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/104 (32%), Positives = 58/104 (55%), Gaps = 5/104 (4%)

Query: 73  NGFQVVAKVAKEF-TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAA 131
            G+ V  K+ KE+  +  GR   K+++D+E+ VD F   E  + +++FSGDG F   +  
Sbjct: 1   MGYTVRTKILKEYYDDTSGRYSQKANLDIEIVVDMFNTVEQYDRVILFSGDGDFERAIEL 60

Query: 132 LQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
           L+ K   +T+VST      M + +LR   D ++DL  +K+ I +
Sbjct: 61  LRSKNTHITVVST----EGMIARELRNATDRYIDLNDIKDSIEK 100


>gi|228473827|ref|ZP_04058569.1| conserved hypothetical protein [Capnocytophaga gingivalis ATCC
           33624]
 gi|228274668|gb|EEK13502.1| conserved hypothetical protein [Capnocytophaga gingivalis ATCC
           33624]
          Length = 211

 Score = 85.8 bits (211), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 45/166 (27%), Gaps = 30/166 (18%)

Query: 6   EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
           +KIA+ ID  N  A   +          ++  +     I  + +          +     
Sbjct: 5   KKIAVLIDADNAQAEYLSES--------IEEVKLYGDPILKWAFGDWTTPQLSSWKQYMA 56

Query: 66  LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGL---EHLVIFSGD 122
                         K  + F  + G    K+S D+ L + A E            I S D
Sbjct: 57  ----------SFAIKPLQSFAHSKG----KNSTDISLVISAMEILYNYPYISGFCILSSD 102

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
             FT LV  L+   K V  +               +    F     
Sbjct: 103 SDFTELVVKLKENNKFVLGIG-----KRQTPPAFVKACHKFKYTDD 143


>gi|312620998|ref|YP_003993726.1| protein of unknown function duf88 [Photobacterium damselae subsp.
           damselae]
 gi|311872719|emb|CBX86813.1| protein of unknown function DUF88 [Photobacterium damselae subsp.
           damselae]
          Length = 222

 Score = 85.8 bits (211), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 56/161 (34%), Gaps = 29/161 (18%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           IALF+D  N  +S        ++  +++    R  +   + Y          +       
Sbjct: 9   IALFVDADNTSSS--------NFTFVIEQLLKRGQIHYRHLYGNWTKPCLSSW------- 53

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDGCF 125
                   +V    A +F +       K++ D+ + VD  E  QS     + I + D  F
Sbjct: 54  -------HEVGQLHAAQFIQVFDLCSHKNASDIAMVVDILEWNQSHPNHVIAIMTSDSDF 106

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
           T L+  L+R       +       +  S  L++    F+ +
Sbjct: 107 TPLLNQLRRHQITTIGIG-----NANCSIHLQKSFSSFIPI 142


>gi|269105290|ref|ZP_06157980.1| protein of unknown function DUF88 [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268160490|gb|EEZ38993.1| protein of unknown function DUF88 [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 222

 Score = 85.5 bits (210), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 33/176 (18%), Positives = 62/176 (35%), Gaps = 32/176 (18%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           IALF+D  N   S        ++  +++    R  +   + Y          +       
Sbjct: 9   IALFVDADNTSPS--------NFTFVIEQLLKRGQIHYRHIYGNWTKPCLSSW------- 53

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDGCF 125
                   +V    A +F +       K++ D+ + VD  E  QS     + I + D  F
Sbjct: 54  -------HEVGQLHAAQFIQVFDLCSHKNASDIAMVVDILEWNQSHPNHVIAIMTSDSDF 106

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
           T L+  L+R       +       +  S  L++    F+ +  +K  I+  P + K
Sbjct: 107 TPLLNQLRRHQITTIGIG-----NANCSIHLQKSFSTFIPI-PVKETIS--PTKPK 154


>gi|262198573|ref|YP_003269782.1| hypothetical protein Hoch_5405 [Haliangium ochraceum DSM 14365]
 gi|262081920|gb|ACY17889.1| protein of unknown function DUF88 [Haliangium ochraceum DSM 14365]
          Length = 450

 Score = 85.5 bits (210), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 57/193 (29%), Gaps = 27/193 (13%)

Query: 1   MFDPREKIALFIDGANLYASS-------KALGFDIDYRKLLKAFRSRA-------IVIRA 46
           M    +  AL ID  N Y S               D+ + L+     A        +I  
Sbjct: 10  MTIMSQHAALLIDLENFYLSRENGTLSEARGEVHYDFHRDLEILCRGAQRIAGDKRLIVR 69

Query: 47  YYYTTV----VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVEL 102
             Y         D   +       L        +   +  + F    G    K++ D+ L
Sbjct: 70  RAYADFNAYRRSDDSARPYRKDYYLRHTPKLLMERGVEPVQVFRFPGGGN--KNAADMRL 127

Query: 103 AVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQ 159
           A+DA         ++  ++ +GD  F  L   L+R    V  +          S  L R 
Sbjct: 128 AMDATTLMAPPSCVDTFILVTGDADFIRLTLELRRCGAFVAGI----GVRETTSSVLPRY 183

Query: 160 ADYFMDLAYLKNE 172
            D F     L  E
Sbjct: 184 CDRFDYFTDLAGE 196


>gi|158336589|ref|YP_001517763.1| hypothetical protein AM1_3453 [Acaryochloris marina MBIC11017]
 gi|158306830|gb|ABW28447.1| conserved domain protein [Acaryochloris marina MBIC11017]
          Length = 459

 Score = 85.5 bits (210), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 41/178 (23%), Positives = 78/178 (43%), Gaps = 27/178 (15%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           +A+F D  N+  +++ +   +    L++  +S+        Y+    + E        L+
Sbjct: 95  VAVFWDYENVKIAAQGIQAPL-AESLVEYSQSQGHTRLKIVYSNWRREKES-------LV 146

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGC 124
             L+  GF+ +                ++++DV+L VD    +     + H +I +GD  
Sbjct: 147 QALYSLGFEPIHV----------STGKENAVDVKLTVDCLNTAYQYPDVGHFIIVTGDRD 196

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182
           F  LV AL+   K+VT++        +AS+QL   AD F+DL  L  +  +   ED +
Sbjct: 197 FVPLVNALKTLEKQVTLI----GRAEVASNQLLLSADEFIDLEKL--DTEKLDTEDTE 248


>gi|221640949|ref|YP_002527211.1| hypothetical protein RSKD131_2850 [Rhodobacter sphaeroides KD131]
 gi|221161730|gb|ACM02710.1| Hypothetical Protein RSKD131_2850 [Rhodobacter sphaeroides KD131]
          Length = 238

 Score = 85.5 bits (210), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 52/173 (30%), Gaps = 30/173 (17%)

Query: 11  FIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWL 70
            ID  N+ A+            + +   +         Y                 L+  
Sbjct: 2   LIDADNVPANY--------AEAIFEEIAALGEASVRRIYGDWSA----------MRLNAW 43

Query: 71  HYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDGCFTTL 128
                 +     ++F+   G    K++ D+ L + A +   S   +  V+ S D  FT L
Sbjct: 44  AKKVAALGLVADQQFSNTKG----KNASDIGLVISAMDFLHSGLFDGFVLVSSDSDFTRL 99

Query: 129 VAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
            A ++ +   V  +           +  R     F+ +  L ++      E +
Sbjct: 100 AARIREQGLDVYGIGEKK-----TPEAFRMACKRFIYVENLGSD-EAPAREPR 146


>gi|150399127|ref|YP_001322894.1| hypothetical protein Mevan_0373 [Methanococcus vannielii SB]
 gi|150011830|gb|ABR54282.1| protein of unknown function DUF88 [Methanococcus vannielii SB]
          Length = 215

 Score = 85.1 bits (209), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 64/182 (35%), Gaps = 38/182 (20%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           K+AL IDG N+        F++D  K+  A      ++    Y                L
Sbjct: 22  KMALLIDGPNM----LRKEFNVDLDKVRDALDEFGDIVVGRVYLN--------QYASDKL 69

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124
           ++ +   GF+                     +DVE+AVD  E    + ++ +V  + D  
Sbjct: 70  IEAIANQGFEPRI--------------SAGDVDVEMAVDGTELIFNKNIDTIVYMTRDAD 115

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM------DLAYLKNEIARDPD 178
           F   +   + + K++ +V          S  ++  AD+ +      +L   K E  +   
Sbjct: 116 FLPAIRKAKERGKQIIVVGAEPGF----STAIQNIADHVIRVEEDFELDKEKLEQKKRDR 171

Query: 179 ED 180
           E 
Sbjct: 172 EQ 173


>gi|332559892|ref|ZP_08414214.1| hypothetical protein RSWS8N_12555 [Rhodobacter sphaeroides WS8N]
 gi|332277604|gb|EGJ22919.1| hypothetical protein RSWS8N_12555 [Rhodobacter sphaeroides WS8N]
          Length = 265

 Score = 85.1 bits (209), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 38/178 (21%), Positives = 65/178 (36%), Gaps = 38/178 (21%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           +A+ ID  NL  S K     +     + A   R  V+RAY +                  
Sbjct: 4   VAVLIDADNL--SGKHAAQIMQ----VAAALGRPTVLRAYVHAQRP-------------C 44

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCF 125
           DW   +GF++                 K++ D+ LA+DA E +    ++  VI S DG F
Sbjct: 45  DWHGVHGFRL-----------MHAGTGKNASDLLLALDAVELALRGDVDQFVIASSDGDF 93

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK-NEIARDPDEDKK 182
           + L   L+     VT V              R     F+++   +   + + P ++ +
Sbjct: 94  SHLALRLREYGALVTGVGEDK-----TPQTFRAACADFVEIGARRLASVPKPPSKEAQ 146


>gi|239905768|ref|YP_002952507.1| hypothetical protein DMR_11300 [Desulfovibrio magneticus RS-1]
 gi|239795632|dbj|BAH74621.1| hypothetical protein [Desulfovibrio magneticus RS-1]
          Length = 199

 Score = 85.1 bits (209), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 64/193 (33%), Gaps = 29/193 (15%)

Query: 11  FIDGANLYASSKALG--FDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68
            ID   +Y         + IDY KL     +   + RAYY  ++     +     +  + 
Sbjct: 8   LIDAGYMYRGQSYFSREYSIDYVKLRNKLEAETPIWRAYYLNSIPHPTPESQIAFYNWMR 67

Query: 69  WLHYNGFQVVAK---------------------VAKEFTENCGR--KRVKSSMDVELAVD 105
                G +++ K                           +   R  +  +  +DV LA  
Sbjct: 68  SAPPQGPKIITKLYELRTSEINELYCEQCRRKVPVTCPNDRAHRLSREQQKGVDVGLATL 127

Query: 106 AFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165
           A    E  + L++ SGD      V  +  K K+  ++          S  L+ +AD    
Sbjct: 128 ALTHIENYDTLILSSGDSDLLDAVEYITEKNKRFELLVFKNGV----STDLQCRADRIWW 183

Query: 166 LAYLKNEIARDPD 178
           +    +E+AR+  
Sbjct: 184 IDEFAHEVAREAR 196


>gi|150402231|ref|YP_001329525.1| hypothetical protein MmarC7_0304 [Methanococcus maripaludis C7]
 gi|150033261|gb|ABR65374.1| protein of unknown function DUF88 [Methanococcus maripaludis C7]
          Length = 215

 Score = 85.1 bits (209), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 64/181 (35%), Gaps = 38/181 (20%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           K+AL IDG N+        F++D  K+  A      ++    Y                L
Sbjct: 22  KMALLIDGPNM----LRKEFNVDLDKVRDALEQFGDIVVGRVYLN--------QYASDKL 69

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124
           ++ +   GF+                     +DVE+AVD  E    + L+ LV  + D  
Sbjct: 70  IEAIANQGFEPRI--------------SAGDVDVEMAVDGTELIFNKNLDTLVYMTRDAD 115

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM------DLAYLKNEIARDPD 178
           F   +   + + K++ +V          S  ++  AD+ +      +L   K E  +   
Sbjct: 116 FLPAIRKAKERGKQIIVVGAEPGF----STAIQNIADHVIRVEEDFELDKEKLEQKKRER 171

Query: 179 E 179
           E
Sbjct: 172 E 172


>gi|218128838|ref|ZP_03457642.1| hypothetical protein BACEGG_00410 [Bacteroides eggerthii DSM 20697]
 gi|217989066|gb|EEC55382.1| hypothetical protein BACEGG_00410 [Bacteroides eggerthii DSM 20697]
          Length = 234

 Score = 84.7 bits (208), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 47/162 (29%), Gaps = 29/162 (17%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           +A+ IDG N                ++         +    Y             L    
Sbjct: 11  VAVLIDGDNASFER--------MEDIMGFVSRYGDAVVRRIYGDWT------RKALSAWK 56

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCF 125
           +    +GF++V        +       K++ D+ L +DA +      ++   + + DG +
Sbjct: 57  ESAREHGFRLV--------QASSHVPGKNTTDIALVIDAMDILRDGQVDCFCLVASDGDY 108

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
           + L   ++    KV                L R    F+   
Sbjct: 109 SLLAQRIREAGVKVLGYGEGK-----TPVSLVRSCSVFLYAD 145


>gi|118470413|ref|YP_885602.1| hypothetical protein MSMEG_1210 [Mycobacterium smegmatis str. MC2
           155]
 gi|118171700|gb|ABK72596.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2
           155]
          Length = 289

 Score = 84.7 bits (208), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 59/194 (30%), Gaps = 42/194 (21%)

Query: 1   MFDPRE-KIALFIDGANLYASS---------------------KALGFDIDYRKLLKAFR 38
           M +P   ++A+++D  N+  S                      K +   +D   +L    
Sbjct: 1   MTEPAPTRVAVYLDFDNIVISRYDQVNGRNSFQKDKAKGLEADKLIKATVDVGAILDFAS 60

Query: 39  SRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSM 98
           S   ++    Y     D    +             G  V                 K+  
Sbjct: 61  SFGTLVLTRAYADWSADVNAGYRQQL--------VGRAVDLVQL-----FPAAAYGKNGA 107

Query: 99  DVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQ 155
           D+ LAVDA E       L H+VI +GD  +  L    +R  + V  +         +S  
Sbjct: 108 DIRLAVDAVEDMFRLPDLTHVVIVAGDSDYIPLAQRCKRLGRYVVGI----GVAGASSRA 163

Query: 156 LRRQADYFMDLAYL 169
           L    D F+    L
Sbjct: 164 LAAACDEFIIYDAL 177


>gi|42528036|ref|NP_973134.1| hypothetical protein TDE2536 [Treponema denticola ATCC 35405]
 gi|41819081|gb|AAS13053.1| conserved hypothetical protein [Treponema denticola ATCC 35405]
 gi|325474748|gb|EGC77934.1| hypothetical protein HMPREF9353_00781 [Treponema denticola F0402]
          Length = 313

 Score = 84.3 bits (207), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 53/183 (28%), Gaps = 34/183 (18%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
            +K A+ IDG N+  S            ++        V+    Y          + P  
Sbjct: 2   EKKYAILIDGDNIAPSY--------LDSIISEVSKEGEVLIKRLYGDWTTPNMNGWKPWL 53

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG---LEHLVIFSG 121
                      +V  +  ++F          ++ D  + +DA E +     +  + I S 
Sbjct: 54  E----------KVPIRPVQQFRNGP------NATDNTIIMDAIELANTNQGINAVCIVST 97

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK--NEIARDPDE 179
           D  + +L   L+     V  +    + P           + F  L       E   D   
Sbjct: 98  DSDYYSLALKLREYGLYVLGIGKSNAKPLW-----VNACNEFKYLENFDETEEYEEDAKS 152

Query: 180 DKK 182
            KK
Sbjct: 153 GKK 155


>gi|221369511|ref|YP_002520607.1| hypothetical protein RSKD131_3674 [Rhodobacter sphaeroides KD131]
 gi|221162563|gb|ACM03534.1| Hypothetical Protein RSKD131_3674 [Rhodobacter sphaeroides KD131]
          Length = 223

 Score = 84.3 bits (207), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 56/162 (34%), Gaps = 37/162 (22%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           + A+ +DG N+ A+           ++L+  R          Y                 
Sbjct: 4   RPAVLVDGDNISAAHGR--------QILEIARGHGTPGVVRVYGNA-----------QCP 44

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124
            DW    G++++                K++ D+ LA+DA E +   G+E  V+ + DG 
Sbjct: 45  KDWHEAWGYRMI-----------HAGSGKNASDLLLAIDAMELALARGVEAFVVATSDGD 93

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
           F+ L   L+     V  V    +         R     F++L
Sbjct: 94  FSHLAHRLRELGTAVIGVGEAKAPA-----SFRGACSRFVEL 130


>gi|302404503|ref|XP_003000089.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
 gi|261361271|gb|EEY23699.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
          Length = 264

 Score = 84.3 bits (207), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 18/122 (14%), Positives = 39/122 (31%), Gaps = 11/122 (9%)

Query: 50  TTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ 109
           +      E   + L  + +    + F    +  ++F    G    K++ D  + +DA + 
Sbjct: 17  SARRSPDEPTATGLATVFEAGRSSCFTQSIQPVQQFAYTSG----KNATDSAMIIDAMDL 72

Query: 110 --SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
             +   +   + S D  FT L A ++     V       +     +       D F    
Sbjct: 73  LYTNRFDGFCLASSDSDFTRLAARIRESGLVVYGFGERKTPKPFVA-----ACDKFTHFE 127

Query: 168 YL 169
            +
Sbjct: 128 NI 129


>gi|269124811|ref|YP_003298181.1| hypothetical protein Tcur_0546 [Thermomonospora curvata DSM 43183]
 gi|268309769|gb|ACY96143.1| protein of unknown function DUF88 [Thermomonospora curvata DSM
           43183]
          Length = 426

 Score = 84.3 bits (207), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 64/199 (32%), Gaps = 37/199 (18%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDI------DYRKLLKAFR------SRAIVIRAYY 48
           M     + A ++D  N++     L  D+      +    L+         +    +    
Sbjct: 1   MRYS--RAAFYLDFDNVFGGLFKLDPDVAIQFASNPGVWLQRLSTTLTVDAPRRWLVLRC 58

Query: 49  YTTVVGDPEQQ-------FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVE 101
           Y    G  +                       GF+V+                K+  D+ 
Sbjct: 59  YLNPAGWVDYHPPLGEPSRLQFFRFRSSFISAGFEVIDCPR--------YNATKNGADIR 110

Query: 102 LAVDAFEQSE---GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRR 158
           +AVD  +        +  VI SGD   T L+  L+R  ++  ++S+V      A++    
Sbjct: 111 IAVDVVDALSADVTYDEFVIASGDSDMTPLLQRLRRADRRTVVMSSVD-----AAEAFIS 165

Query: 159 QADYFMDLAYLKNEIARDP 177
            AD  ++   L   +  +P
Sbjct: 166 IADRTINGQQLLELVQGEP 184


>gi|219848211|ref|YP_002462644.1| hypothetical protein Cagg_1300 [Chloroflexus aggregans DSM 9485]
 gi|219542470|gb|ACL24208.1| protein of unknown function DUF88 [Chloroflexus aggregans DSM 9485]
          Length = 208

 Score = 84.3 bits (207), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 63/188 (33%), Gaps = 20/188 (10%)

Query: 7   KIALFIDGANL------YASSKALGF--DIDYRKLLKAF---RSRAIVIRAYYYTTVVGD 55
           +I +F DG+        + + K +G+     + +L++ F   + +   +    Y +    
Sbjct: 6   RIGVFYDGSYFSYAQTYFYAEKKVGWLSFTPFHRLIEQFISSKEQRYAMHRIVYASWHQG 65

Query: 56  PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGL 113
                                ++    +           +  +DV LAVD  E      +
Sbjct: 66  LFPASQTNEKQFFIERNRHLDLMHAGIEPKYVPMAPSGHEKGVDVSLAVDVMERVMEGKI 125

Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASD---QLRRQADYFMDLAYLK 170
           +  V+ +GDG  T L   + +   +V +       P   S    +L    +Y  ++  L 
Sbjct: 126 DVAVLVTGDGDLTPLARTVMKHGVRVGVFYFEYDSPQRNSRVNGRLITACNYAFNVNDL- 184

Query: 171 NEIARDPD 178
               RDP 
Sbjct: 185 ---ERDPR 189


>gi|159905990|ref|YP_001549652.1| hypothetical protein MmarC6_1608 [Methanococcus maripaludis C6]
 gi|159887483|gb|ABX02420.1| protein of unknown function DUF88 [Methanococcus maripaludis C6]
          Length = 215

 Score = 83.9 bits (206), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 64/181 (35%), Gaps = 38/181 (20%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           K+AL IDG N+        F++D  K+  A      ++    Y                L
Sbjct: 22  KMALLIDGPNM----LRKEFNVDLDKVRDALEQFGDIVVGRVYLN--------QYASDKL 69

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124
           ++ +   GF+                     +DVE+AVD  E    + L+ LV  + D  
Sbjct: 70  IEAIANQGFEPRI--------------SAGDVDVEMAVDGTELIFNKNLDTLVYMTRDAD 115

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM------DLAYLKNEIARDPD 178
           F   +   + + K++ +V          S  ++  AD+ +      +L   K E  +   
Sbjct: 116 FLPAIRKAKERGKQIIVVGAEPGF----STAIQNIADHVIRVEEDFELDKEKLEQKKRDR 171

Query: 179 E 179
           E
Sbjct: 172 E 172


>gi|119898152|ref|YP_933365.1| hypothetical protein azo1861 [Azoarcus sp. BH72]
 gi|119670565|emb|CAL94478.1| hypothetical protein azo1861 [Azoarcus sp. BH72]
          Length = 502

 Score = 83.9 bits (206), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 63/181 (34%), Gaps = 39/181 (21%)

Query: 7   KIALFIDGANLYASSKALGFDI------DYRKLLKAFRS------------RAIVIRAYY 48
           K ALF+D  N+Y+  + L   +        +  L+   S            +  V+    
Sbjct: 2   KSALFVDFDNVYSGLRKLDPRLADLFAQRPQDWLQWLISSLGLPDDAPVDAKRRVLVRRC 61

Query: 49  YTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELA---VD 105
           Y                     +  GF+++   A            K+S D+ +    +D
Sbjct: 62  YLNP--------QAYQRFRWSFNLAGFEIIDCPAL-------TSEGKTSTDIHMVLDTID 106

Query: 106 AFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTI--VSTVLSDPSMASDQLRRQADYF 163
             +     +  +IFS D  FT ++  L+R  ++ T+  +    +    ++D L    D F
Sbjct: 107 LLQHEAHYDEFIIFSADADFTPVLRKLRRWDRRTTVLAIGFPSAAYRASADLLIDV-DTF 165

Query: 164 M 164
           +
Sbjct: 166 V 166


>gi|323455527|gb|EGB11395.1| hypothetical protein AURANDRAFT_8184 [Aureococcus anophagefferens]
          Length = 135

 Score = 83.9 bits (206), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 22/162 (13%), Positives = 45/162 (27%), Gaps = 30/162 (18%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           +A+ ID  N   +S           +++             Y          +       
Sbjct: 2   LAILIDADNTSHNS--------IDLIMRETARFGTRSARRIYGDWASPQLAPWRARIA-- 51

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDGCF 125
                   +      ++F+        K++ D  L +DA +   S   +  V+ S D  F
Sbjct: 52  --------EHSLVPVQQFSHG-----GKNATDSALIIDAMDLLHSNRYQAFVLVSSDADF 98

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
           T L   ++     V  V       +          + F+ + 
Sbjct: 99  TRLATRIREHPSTVVGVG-----RAQTPKGFVNACNAFITIE 135


>gi|149908210|ref|ZP_01896874.1| hypothetical protein PE36_01852 [Moritella sp. PE36]
 gi|149808752|gb|EDM68685.1| hypothetical protein PE36_01852 [Moritella sp. PE36]
          Length = 304

 Score = 83.9 bits (206), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 24/164 (14%), Positives = 52/164 (31%), Gaps = 32/164 (19%)

Query: 9   ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68
           A+ +D  N   +        DY  +L+       V   + Y       ++ +        
Sbjct: 8   AVLVDAENASHN--------DYLAMLEEVEKYGTVAIKWVYADWTDPHQKAWK------- 52

Query: 69  WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLEHLVIFSGDGCF 125
                  +  +   ++F         K + D  L +DA E +     +  + I S DG F
Sbjct: 53  ---DILHETASSPKQQFHYG------KDAADHALMMDAIEVTNNNSRVNAVCIVSSDGGF 103

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
            ++   ++     V  +           ++ R+    F+ +  L
Sbjct: 104 YSVAQRIREYGIHVMAIG-----KKNTPERFRKACHNFVFIDNL 142


>gi|75909290|ref|YP_323586.1| hypothetical protein Ava_3082 [Anabaena variabilis ATCC 29413]
 gi|75703015|gb|ABA22691.1| Protein of unknown function DUF88 [Anabaena variabilis ATCC 29413]
          Length = 261

 Score = 83.9 bits (206), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 67/171 (39%), Gaps = 28/171 (16%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           +AL  D  N+  +          + LL+   S+  +I    Y         +F       
Sbjct: 19  VALACDYQNVPLTPDTA------KLLLEFATSKGRLIHKNVYYN------SKFKNQADAK 66

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGL--EHLVIFSGDGCF 125
             L    F  +               +K+S D +L VD  + +  L  +  +I SGDG F
Sbjct: 67  RNLANLSFNWIDVPCL----------LKNSADNQLIVDCLQVNNNLSPDIFIIVSGDGDF 116

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
           TTL+  LQ+  K+V +++   +       +L+  AD F  +  L  +I ++
Sbjct: 117 TTLINPLQKLGKQVIVIAEAGNVK----QKLKELADEFYFIEELSQKIQQE 163


>gi|220907876|ref|YP_002483187.1| hypothetical protein Cyan7425_2469 [Cyanothece sp. PCC 7425]
 gi|219864487|gb|ACL44826.1| protein of unknown function DUF88 [Cyanothece sp. PCC 7425]
          Length = 629

 Score = 83.5 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/166 (21%), Positives = 66/166 (39%), Gaps = 19/166 (11%)

Query: 7   KIALFIDGANL---YASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
           K A+F D  NL   Y  S+ L   +  +++    R    + +           + +   +
Sbjct: 29  KSAIFYDIENLLRGYNFSQELLESLSLKEIANTIRKTGKIDQFAVQKAYANWSDPRLKTM 88

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFS 120
              ++       ++     + F     R+R K++ D++L +DA   +     ++  VI S
Sbjct: 89  RVEIN-------ELGIDPIQVF--GFSRERTKNAADIQLVIDAINLANLRPSIDTFVIVS 139

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
           GDG F +L   L    KKV   +      S AS   +   D F+++
Sbjct: 140 GDGGFASLAKYLHECGKKVICCA----YKSSASKTFQSVCDGFVEI 181


>gi|294495770|ref|YP_003542263.1| hypothetical protein Mmah_1111 [Methanohalophilus mahii DSM 5219]
 gi|292666769|gb|ADE36618.1| protein of unknown function DUF88 [Methanohalophilus mahii DSM
           5219]
          Length = 206

 Score = 83.5 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/183 (19%), Positives = 64/183 (34%), Gaps = 21/183 (11%)

Query: 3   DPREKIALFIDGANL---YASSKALGFDIDYRKLLKAFR-----------SRAIVIRAYY 48
               ++ +FIDG NL   Y S    G   +     +                  +IRA Y
Sbjct: 19  PSYRRMMVFIDGENLVFNYLSLLKNGKVPNDPVQHEKDVFVWHINSVVNPQFHEIIRANY 78

Query: 49  YTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE 108
           YT + G  E     +  L                  F +   R + K  +D+++ VD   
Sbjct: 79  YTYITGSDETIIDQIKKLAYARPPRSKLPHNLYPVVFKKPKKRAQSKG-VDIQMTVDILS 137

Query: 109 --QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
              +  ++ + +F+GDG +  ++    R  K+V + +           +L  + D F  L
Sbjct: 138 QVYNNNIDTVYLFAGDGDYLPVINEAIRMGKQVYLAAFSHGLN----KKLVNKVDQFHLL 193

Query: 167 AYL 169
             +
Sbjct: 194 DDI 196


>gi|188586884|ref|YP_001918429.1| protein of unknown function DUF88 [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|179351571|gb|ACB85841.1| protein of unknown function DUF88 [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 188

 Score = 83.5 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 69/188 (36%), Gaps = 20/188 (10%)

Query: 1   MFDPREKIALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIV--IRAYYYTTVV---- 53
           M + R+ + +FIDG  L      LG   IDY +L      + ++  +R YYY  +     
Sbjct: 1   MRNYRQSLNIFIDGGFLEKVFAKLGEPKIDYLRLYSWISRQVMIPRLRTYYYHCLPYQGN 60

Query: 54  ------GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAF 107
                  D   +       +  L  +  ++ +   +  +E       +  +DV +A+D  
Sbjct: 61  PPSQGEKDRFSKKQRFFNKISSLPRSEVRLGSLAFRGRSEEKQPIFEQKKVDVLMALDIA 120

Query: 108 EQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165
             +  + + H+ + S D  F   +   + K   V ++ +    P      L    D  + 
Sbjct: 121 RSAFEQRISHIALISSDSDFVPAIQMAKDKGIIVYLLYSHEIKPHH---DLVDACDEVIY 177

Query: 166 L--AYLKN 171
           L    +K 
Sbjct: 178 LTMDDIKE 185


>gi|320101761|ref|YP_004177352.1| hypothetical protein Isop_0206 [Isosphaera pallida ATCC 43644]
 gi|319749043|gb|ADV60803.1| hypothetical protein Isop_0206 [Isosphaera pallida ATCC 43644]
          Length = 493

 Score = 83.5 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 44/181 (24%), Positives = 67/181 (37%), Gaps = 26/181 (14%)

Query: 8   IALFIDGANL---YASSKALGFDIDYRKLLKAFR---SRAIVIRAYYYTTVVGDPEQQFS 61
            A+F D  NL   Y  S+ L  ++   ++L++ R       V     Y            
Sbjct: 6   TAIFYDLENLLKGYNFSQQLLTNLSLVEILESIRATNRLGKVALQRAYANWSDP------ 59

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG---LEHLVI 118
            L  L   ++  G        + F     R   K++ D+++A+DA + +     LE  VI
Sbjct: 60  RLASLRGEVNDLGID----PIQVF--GFARDSRKNAADIQMAIDAIDLAHTRPGLEIFVI 113

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
            SGDG F+ L   L    K V   +      S A+   R   D F+ LA    E  R   
Sbjct: 114 VSGDGGFSALARKLHEYGKTVIGCA----YQSAANRTFRAVCDEFVWLADPIEE-ERGDR 168

Query: 179 E 179
            
Sbjct: 169 S 169


>gi|46580394|ref|YP_011202.1| hypothetical protein DVU1985 [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120602234|ref|YP_966634.1| hypothetical protein Dvul_1187 [Desulfovibrio vulgaris DP4]
 gi|46449811|gb|AAS96461.1| conserved domain protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120562463|gb|ABM28207.1| conserved hypothetical protein [Desulfovibrio vulgaris DP4]
 gi|311233631|gb|ADP86485.1| hypothetical protein Deval_1329 [Desulfovibrio vulgaris RCH1]
          Length = 418

 Score = 83.5 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 69/189 (36%), Gaps = 35/189 (18%)

Query: 9   ALFIDGANLYASSKALG------FDIDYRKLLKAFRS------RAIVIRAYYYTTVVGDP 56
           AL++D  N+Y   + +       F  + ++ LK              +R      +    
Sbjct: 13  ALYVDFDNIYTRLREMDPETARLFGRNPQRWLKWLEGHALKMLYGDGVRRR---ILKRIC 69

Query: 57  EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE---QSEGL 113
                       +     FQVV             ++ K+S D+ L +D  +    +   
Sbjct: 70  YLNPEWYQEYRPYFIRAAFQVVDCP-------PLTQQGKTSADIHLVMDCMDALSHTTRF 122

Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM---ASDQLRRQADYFMDLAYLK 170
           +  +I SGD  FT L+  +Q   ++  ++S   + P+    AS ++R   D+F+      
Sbjct: 123 DEFIILSGDADFTPLLIRIQEHARRSLVLSVGYTSPAYAAAASWRIRE--DWFV-----A 175

Query: 171 NEIARDPDE 179
             +  DP E
Sbjct: 176 QAVEEDPQE 184


>gi|254417286|ref|ZP_05031030.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
           7420]
 gi|196175939|gb|EDX70959.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
           7420]
          Length = 110

 Score = 83.5 bits (205), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/102 (33%), Positives = 61/102 (59%), Gaps = 8/102 (7%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            + R ++A+FIDG+NL+ ++  LG +IDY KLL    + + ++R+++YT V    E+Q  
Sbjct: 17  LENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLVRLTAGSRLLRSFFYTGVDRTNEKQ-- 74

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELA 103
                L W+  NG++V+AK   +  +       K+++DVE+A
Sbjct: 75  --QGFLLWMRRNGYRVIAKDLVQLPDGS----KKANLDVEIA 110


>gi|300024275|ref|YP_003756886.1| hypothetical protein Hden_2769 [Hyphomicrobium denitrificans ATCC
           51888]
 gi|299526096|gb|ADJ24565.1| protein of unknown function DUF88 [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 656

 Score = 83.1 bits (204), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 65/200 (32%), Gaps = 37/200 (18%)

Query: 10  LFIDGANLYASSKALG------FDIDYRKLLKAFRSR--------------AIVIRAYYY 49
           +F+D  N+Y S K         F  D    L+   S                 ++ +  Y
Sbjct: 13  VFVDYDNVYLSLKRKNEDAAKRFAKDSSIWLQGIASGELITSKTSLPVPTERRIVMSRCY 72

Query: 50  TTVVG-----DPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAV 104
                     D          +      +GF+V+             +++K+S D+ + +
Sbjct: 73  GNSQPRRNAHDNSTDMCSFPFIRHHFQRSGFEVIDCP-------PLTQQLKNSADIRIVM 125

Query: 105 DAFEQSEG---LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMA--SDQLRRQ 159
           D  +        +  +I SGD  FT ++  L+   ++  + +   +       SD   ++
Sbjct: 126 DVSDILNHPTFFDEFIILSGDADFTPVLHRLRAHARRTVVYANDHTALPYTAISDGEIKE 185

Query: 160 ADYFMDLAYLKNEIARDPDE 179
           +D    L   +      P E
Sbjct: 186 SDLLALLTNSRAIAGETPRE 205


>gi|298292631|ref|YP_003694570.1| hypothetical protein Snov_2657 [Starkeya novella DSM 506]
 gi|296929142|gb|ADH89951.1| protein of unknown function DUF88 [Starkeya novella DSM 506]
          Length = 208

 Score = 83.1 bits (204), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 72/188 (38%), Gaps = 13/188 (6%)

Query: 7   KIALFIDGANLYASSKALG----FDIDYRKLLK-AFRSRAIVIRAYYYTTVVGDPEQQFS 61
           ++A ++DG NLY +  ALG      ++ R L +       +++R  ++T        +  
Sbjct: 2   RVACYVDGFNLYHAVDALGDARLKWLNLRSLAESYLAPDDVLVRTVFFTAFNTWEHAKRQ 61

Query: 62  PLHPLLDWLHYNGFQVVA----KVAKEF--TENCGRKRVKSSMDVELAVDAFEQSEG--L 113
                +  L   G +VV     KV K     E   + R +   DV +A++         +
Sbjct: 62  RHVNYVKALGATGVEVVLSRFDKVHKHCFTHERFCKLREEKQTDVAIAIEVMSDCYERGI 121

Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
           E +++ + D     +V  ++ +  +  I          A+ +L +      +L   +   
Sbjct: 122 ERVLLITADSDQVPMVRRIRDRFPETIIFMIAPPKRLNAARELGQACSGVAELTAGRLRQ 181

Query: 174 ARDPDEDK 181
              PDE +
Sbjct: 182 HALPDELR 189


>gi|183982600|ref|YP_001850891.1| hypothetical protein MMAR_2590 [Mycobacterium marinum M]
 gi|183175926|gb|ACC41036.1| conserved hypothetical protein [Mycobacterium marinum M]
          Length = 288

 Score = 83.1 bits (204), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/207 (18%), Positives = 61/207 (29%), Gaps = 42/207 (20%)

Query: 1   MFDP-REKIALFIDGANL-------------YASSKALGFD--------IDYRKLLKAFR 38
           M D    ++A++ D  N+             +   K+ G +        +D   ++    
Sbjct: 1   MTDSSTSRVAVYFDFDNIVISRYEQVHGRNTFHRDKSKGLEQERLQLATVDLGAIIDFAS 60

Query: 39  SRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSM 98
           S   ++    Y     D    +             G  V                 K+  
Sbjct: 61  SFGTLVLTRAYADWSADVNAGYHGQL--------VGRAVDLVQL-----FPAASYGKNGA 107

Query: 99  DVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQ 155
           D+ LAVDA E       L H+VI  GD  +  L    +R  + V  +         +S  
Sbjct: 108 DIRLAVDAVEDMFRLPDLTHVVIVGGDSDYIALAQRCKRLGRYVVGI----GVAGASSGS 163

Query: 156 LRRQADYFMDLAYLKNEIARDPDEDKK 182
           L    D F+    L       P   KK
Sbjct: 164 LAAACDEFVTYDALPGIPTLPPPAAKK 190


>gi|217968792|ref|YP_002354026.1| hypothetical protein Tmz1t_0344 [Thauera sp. MZ1T]
 gi|217506119|gb|ACK53130.1| protein of unknown function DUF88 [Thauera sp. MZ1T]
          Length = 504

 Score = 83.1 bits (204), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 65/181 (35%), Gaps = 39/181 (21%)

Query: 7   KIALFIDGANLYASSKAL------GFDIDYRKLLKAF------------RSRAIVIRAYY 48
           K ALF+D  N+Y+  + L       F    ++ ++               +R  V+    
Sbjct: 2   KSALFVDFDNVYSGLRKLDPAMADQFAQKPQRWMQWLVASLGLPEHSPESARRRVLVRRC 61

Query: 49  YTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE 108
           Y                     +  GF+++                K+S D+ + +D  +
Sbjct: 62  YLNP--------QVYQRFRPSFNLAGFEIIDCP-------SLTSEGKTSTDIHMVLDIID 106

Query: 109 QSEG---LEHLVIFSGDGCFTTLVAALQRKVKKVTI--VSTVLSDPSMASDQLRRQADYF 163
             +     +  ++FS D  FT ++  L+R  ++ T+  +    +    ++D L  Q D F
Sbjct: 107 LLQHEAHYDEFIVFSADADFTPVLRKLRRWDRRTTVLAIGFPSAAYRASADLLIDQ-DLF 165

Query: 164 M 164
           +
Sbjct: 166 V 166


>gi|205356564|ref|ZP_03223327.1| hypothetical protein Cj8421_0189 [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|205345569|gb|EDZ32209.1| hypothetical protein Cj8421_0189 [Campylobacter jejuni subsp.
           jejuni CG8421]
          Length = 683

 Score = 83.1 bits (204), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 55/175 (31%), Gaps = 31/175 (17%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
            + IA+FID  N+   +K      D             VI    Y        Q +    
Sbjct: 3   NKSIAIFIDAENIP--AKYAKSIFDI------ASDYGEVIIKRIYGDWTQKNIQGW---- 50

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGD 122
                      +      ++F         K+S D+ L  +       + ++  VI S D
Sbjct: 51  ------REQIAEYSLIAMQQF----NFAANKNSSDMYLITEIMSIFYEKNIDIFVIVSSD 100

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
             +T+L+  L+   K+V  +    S  S            F  L   K+E  ++ 
Sbjct: 101 SDYTSLIQKLRENKKQVIGMGLEKSIKSY-----VNAFSEFFYLD--KDESKKED 148


>gi|217968518|ref|YP_002353752.1| hypothetical protein Tmz1t_0056 [Thauera sp. MZ1T]
 gi|217505845|gb|ACK52856.1| protein of unknown function DUF88 [Thauera sp. MZ1T]
          Length = 448

 Score = 83.1 bits (204), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 62/181 (34%), Gaps = 39/181 (21%)

Query: 7   KIALFIDGANLYASSKALGFDI------DYRKLLKAFRS------------RAIVIRAYY 48
           K ALF+D  N+Y+  + L   I         + +                 R  ++    
Sbjct: 2   KSALFVDFDNVYSGLRKLDPAIADRFARQPLEWVNWVIGELELPDHAPAGARRRLLVRRC 61

Query: 49  YTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE 108
           Y                     +  GF+++   A            K+S D+ + +D  +
Sbjct: 62  YLNP--------QAYQRFRPSFNLAGFEIIDCPAL-------TSEGKTSTDIHMVLDIID 106

Query: 109 QSEG---LEHLVIFSGDGCFTTLVAALQRKVKKVTI--VSTVLSDPSMASDQLRRQADYF 163
             +     +  ++FS D  FT ++  L+R  ++ T+  +    +    ++D L    D F
Sbjct: 107 LLQHEARYDEFIVFSADADFTPVLRKLRRWDRRTTVLAIGFPSAAYRASADLLID-PDEF 165

Query: 164 M 164
           +
Sbjct: 166 V 166


>gi|289610064|emb|CBI60331.1| unnamed protein product [Sordaria macrospora]
          Length = 257

 Score = 83.1 bits (204), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 58/186 (31%), Gaps = 31/186 (16%)

Query: 10  LFIDGANLYASSK------ALGFDIDYRKLLKAFR-----SRAIVIRAYYYTTVVGD--- 55
           +F+D  N++ +        A+ F  D    L              + A  Y    G+   
Sbjct: 7   IFVDFDNVFTALWGIDEGLAIRFASDPADWLTRLGTLDTDEPRRWLVARCYMNPRGNVSA 66

Query: 56  --PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
                               GF+V+                K++ D+ + +D  +     
Sbjct: 67  PGERNDRLWFSNFRTNFVRAGFEVIDCP-------PLTWGAKNAADIRMVIDVLDLLGHR 119

Query: 113 --LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
                 V  SGD  FT L+  L+ + ++ TI+S      +  S      A+  + L  L+
Sbjct: 120 TRFGEFVFLSGDSDFTPLLHRLRAEDRRTTILSPGHLAAAYTS-----VAERVLGLDTLE 174

Query: 171 NEIARD 176
             +   
Sbjct: 175 TLLTET 180


>gi|303247327|ref|ZP_07333600.1| protein of unknown function DUF88 [Desulfovibrio fructosovorans JJ]
 gi|302491241|gb|EFL51130.1| protein of unknown function DUF88 [Desulfovibrio fructosovorans JJ]
          Length = 193

 Score = 83.1 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 61/190 (32%), Gaps = 29/190 (15%)

Query: 11  FIDGANLYASSKALGFD--IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68
            ID   +Y        D  IDY KL         + RAYY  +V           +  + 
Sbjct: 8   LIDAGYMYRGQSIYNRDYSIDYVKLRNKLEIEEPLWRAYYLNSVPNPTPDAQVSFYNWMR 67

Query: 69  WLHYNGFQVVAK---------------------VAKEFTENCGR--KRVKSSMDVELAVD 105
                G +++ K                           +   R  +  +  +DV LA  
Sbjct: 68  SAPPIGPKIITKLYELRSSEITDLYCEHCRRKVPVACPNDPKHRLSREQQKGVDVGLATL 127

Query: 106 AFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165
           A    +  + L++ SGD      +  +  K K+  ++          S  L+ +AD    
Sbjct: 128 ALTHVDNYDTLILSSGDSDLLDAIEYITEKNKRFELLVFKNGV----STDLQCRADRIYW 183

Query: 166 LAYLKNEIAR 175
           +    +E+AR
Sbjct: 184 IDDFASEVAR 193


>gi|254776999|ref|ZP_05218515.1| hypothetical protein MaviaA2_20351 [Mycobacterium avium subsp.
           avium ATCC 25291]
          Length = 296

 Score = 83.1 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 60/207 (28%), Gaps = 46/207 (22%)

Query: 1   MFDP-REKIALFIDGANLYASS-----------------------KALGFDIDYRKLLKA 36
           M +P   ++A+++D  N+  S                        +     +D   +L  
Sbjct: 5   MSEPVAPRVAVYLDFDNIVISRYDQIHGRNSFQRDKAKGLEQFTERLEQATVDVGAILDF 64

Query: 37  FRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKS 96
             S   ++    Y     +    +              F                   K+
Sbjct: 65  ASSFGTLVLTRAYADWSAEINAGYRGQLVARAVDLVQLF-------------PAAAYGKN 111

Query: 97  SMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMAS 153
             D+ LAVDA E       L H+VI +GD  +  L    +R  + V  +         +S
Sbjct: 112 GADIRLAVDAVEDMFRLPDLTHVVIVAGDSDYIPLAQRCKRLGRYVVGI----GVAGASS 167

Query: 154 DQLRRQADYFMDLAYLKNE--IARDPD 178
             L    D F+    L     + R P 
Sbjct: 168 RALAAACDEFVIYDALPGVTALDRTPA 194


>gi|258649161|ref|ZP_05736630.1| conserved hypothetical protein [Prevotella tannerae ATCC 51259]
 gi|260850826|gb|EEX70695.1| conserved hypothetical protein [Prevotella tannerae ATCC 51259]
          Length = 239

 Score = 83.1 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 49/158 (31%), Gaps = 29/158 (18%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           IA+ IDG N+  ++  LG       ++    S    I    Y        +++       
Sbjct: 14  IAILIDGDNV--AADKLG------DIISFVSSYGNPIIRRIYADWTKPAMKRWK------ 59

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCF 125
                  F      A  +        VK++ D+ L +DA +      ++   I S D  +
Sbjct: 60  --EDAKTFSFRLVEALSYVG------VKNTTDMALVIDAMDLLHGKNVQGFCIVSSDSDY 111

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163
           T L   ++ +   V                L+     F
Sbjct: 112 TLLAQRIREEGLLVLGYGEQK-----TPASLQNSCHEF 144


>gi|146279485|ref|YP_001169643.1| hypothetical protein Rsph17025_3462 [Rhodobacter sphaeroides ATCC
           17025]
 gi|145557726|gb|ABP72338.1| hypothetical protein Rsph17025_3462 [Rhodobacter sphaeroides ATCC
           17025]
          Length = 225

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 51/161 (31%), Gaps = 37/161 (22%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           +A+ IDG NL  S K         ++++   +         Y                  
Sbjct: 4   VAVLIDGDNL--SGKHA------ARIVEVAAALGRPTVQRVYVDAQRPC----------- 44

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCF 125
           DW    GF++                 K++ D+ LA+DA E +     +  VI S D  F
Sbjct: 45  DWHAARGFRL-----------MHAGTGKNASDLLLALDAVELALRGDADQFVIASSDRDF 93

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
           T L   L+     VT V              R     F+ +
Sbjct: 94  THLALRLREYGASVTGVGEAK-----TPQSFRAACADFIVI 129


>gi|41410167|ref|NP_963003.1| hypothetical protein MAP4069c [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41399000|gb|AAS06619.1| hypothetical protein MAP_4069c [Mycobacterium avium subsp.
           paratuberculosis K-10]
          Length = 292

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 60/207 (28%), Gaps = 46/207 (22%)

Query: 1   MFDP-REKIALFIDGANLYASS-----------------------KALGFDIDYRKLLKA 36
           M +P   ++A+++D  N+  S                        +     +D   +L  
Sbjct: 1   MSEPVAPRVAVYLDFDNIVISRYDQIHGRNSFQRDKAKGLEQFTERLEQATVDVGAILDF 60

Query: 37  FRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKS 96
             S   ++    Y     +    +              F                   K+
Sbjct: 61  ASSFGTLVLTRAYADWSAEINAGYRGQLVARAVDLVQLF-------------PAAAYGKN 107

Query: 97  SMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMAS 153
             D+ LAVDA E       L H+VI +GD  +  L    +R  + V  +         +S
Sbjct: 108 GADIRLAVDAVEDMFRLPDLTHVVIVAGDSDYIPLAQRCKRLGRYVVGI----GVAGASS 163

Query: 154 DQLRRQADYFMDLAYLKNE--IARDPD 178
             L    D F+    L     + R P 
Sbjct: 164 RALAAACDEFVIYDALPGVTALDRTPA 190


>gi|301312472|ref|ZP_07218386.1| conserved hypothetical protein [Bacteroides sp. 20_3]
 gi|300829538|gb|EFK60194.1| conserved hypothetical protein [Bacteroides sp. 20_3]
          Length = 234

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 46/162 (28%), Gaps = 29/162 (17%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           +A+ IDG N                ++         +    Y             L    
Sbjct: 11  VAVLIDGDNASFE--------KMEDIMGFVSRYGDAVVRRIYGDWT------RKALSAWK 56

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCF 125
           +    +GF++V        +       K++ D+ L +DA +       +   + + DG +
Sbjct: 57  ETAREHGFRLV--------QASSHASGKNTTDIALVIDAMDILRDGRADCFCLVASDGDY 108

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
           + L   ++    KV                L R    F+   
Sbjct: 109 SLLAQRIREAGLKVLGYGEGK-----TPVSLVRSCSVFLYAD 145


>gi|29348060|ref|NP_811563.1| hypothetical protein BT_2650 [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29339962|gb|AAO77757.1| conserved hypothetical protein [Bacteroides thetaiotaomicron
           VPI-5482]
          Length = 233

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 49/172 (28%), Gaps = 30/172 (17%)

Query: 3   DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
           +    +A+ IDG N                +++        +    Y          +  
Sbjct: 4   EKDLSVAVLIDGDN--------ASSEKMEDVMRFVSRYGAAVVRRIYGDWTKKSLSGWK- 54

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFS 120
                D      F++V        +       K++ D+ L +DA +      +    + +
Sbjct: 55  -----DAARDYSFRMV--------QASSFVPGKNTTDIALVMDAMDILHEGRVGCFCLVA 101

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
            DG +T L   ++     V                L R    F+ LA  K E
Sbjct: 102 SDGDYTLLAQRIRESGLTVLGYGEGK-----TPAALVRSCTEFL-LADRKEE 147


>gi|302870557|ref|YP_003839194.1| hypothetical protein Micau_6123 [Micromonospora aurantiaca ATCC
           27029]
 gi|302573416|gb|ADL49618.1| protein of unknown function DUF88 [Micromonospora aurantiaca ATCC
           27029]
          Length = 441

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/190 (21%), Positives = 67/190 (35%), Gaps = 35/190 (18%)

Query: 7   KIALFIDGANLYASSKALGFDI------DYRKLLKAFR--------SRAIVIRAY----- 47
           + AL++D  N+++    L  D+      D    L+            R +V+R Y     
Sbjct: 5   RAALYLDFDNVFSGLYKLDPDVAVHFAEDPAGWLRRLATTATTDGARRWLVLRCYLNPAG 64

Query: 48  YYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAF 107
           +        EQ               GF V+                K++ D+ + VDA 
Sbjct: 65  WVYRPDPGGEQTRLYFSKFRPSFVRAGFDVIDCPR--------YSSTKNAADIRIVVDAV 116

Query: 108 EQSE---GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
           +        +  VI SGD   T L+  L+R  ++  IVS     P+ A++     AD  +
Sbjct: 117 DALSADTRYDEFVIASGDSDMTPLLQRLRRSDRRTMIVS-----PADAAEAFTAIADQVL 171

Query: 165 DLAYLKNEIA 174
           D   L   + 
Sbjct: 172 DSQQLLALVQ 181


>gi|302131135|ref|ZP_07257125.1| hypothetical protein PsyrptN_07055 [Pseudomonas syringae pv. tomato
           NCPPB 1108]
          Length = 170

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 21/170 (12%), Positives = 43/170 (25%), Gaps = 48/170 (28%)

Query: 3   DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
           + ++ +A+ ID  N  A+            L +      +      Y    G     +  
Sbjct: 8   NAQKHLAILIDADNAPAAI--------VEGLFEEIAKHGVASVKRIYGDWTGPQLGGWKK 59

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
                            +  ++F    G+                          + S D
Sbjct: 60  ----------VLLDHSIQPIQQFAYTKGKS-------------------------LVSSD 84

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
             FT L + L+ +   V       S     +       D F+ +  L+ +
Sbjct: 85  SDFTRLASRLREEGLTVYGFGEEKSPKPFVA-----ACDKFIYIELLRGD 129


>gi|237708343|ref|ZP_04538824.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|229457564|gb|EEO63285.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
          Length = 234

 Score = 82.8 bits (203), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/169 (15%), Positives = 51/169 (30%), Gaps = 29/169 (17%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           +A+ IDG N                ++         I    Y             L    
Sbjct: 11  VAVLIDGDNASFE--------KMEDIMGFVSRYGDAIVRRIYGDWTK------KALSAWK 56

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCF 125
           +    +GF++V        +       K++ D+ L +DA +       +   + + DG +
Sbjct: 57  ETAREHGFRLV--------QASSHAPGKNTTDIALVIDAMDILRDGRADCFCLVASDGDY 108

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
           + L   ++    KV                L R    F+     +N+I+
Sbjct: 109 SLLAQRIREAGLKVLGYGEGK-----TPVSLVRSCSVFLYADRKENKIS 152


>gi|91772864|ref|YP_565556.1| hypothetical protein Mbur_0855 [Methanococcoides burtonii DSM 6242]
 gi|91711879|gb|ABE51806.1| Protein of unknown function DUF88 [Methanococcoides burtonii DSM
           6242]
          Length = 183

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 55/166 (33%), Gaps = 32/166 (19%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
           R  I L +DG N+        F+++  ++    +    V     +               
Sbjct: 23  RRSIGLLVDGPNV----LRKEFNVNLEEIRDVLKEYGNVKIGRVFLN--------QYASD 70

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGD 122
            L++ +  NGF+ +                 S +DV LAV+  E      ++ + + + D
Sbjct: 71  KLVEAIENNGFEPIIC--------------SSDVDVRLAVEGMELVYNPTIDTIALVTRD 116

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
             F  L+       K+  +           S  LR  ADY + L  
Sbjct: 117 ADFKPLLNKANEHGKETILFGVEPGF----STALRNSADYVIILEN 158


>gi|167764633|ref|ZP_02436754.1| hypothetical protein BACSTE_03023 [Bacteroides stercoris ATCC
           43183]
 gi|167697302|gb|EDS13881.1| hypothetical protein BACSTE_03023 [Bacteroides stercoris ATCC
           43183]
          Length = 234

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 46/162 (28%), Gaps = 29/162 (17%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           +A+ IDG N                ++         I    Y             L    
Sbjct: 11  VAVLIDGDNASFE--------KMEDIMGFVSRYGDAIVRRIYGDWTK------KALSAWK 56

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCF 125
           +    +GF++V        +       K++ D+ L +DA +       +   + + DG +
Sbjct: 57  ETAREHGFRLV--------QASSHAPGKNTTDIALVIDAMDILRDGRADCFCLVASDGDY 108

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
           + L   ++    KV                L R    F+   
Sbjct: 109 SLLAQRIREAGLKVLGYGEGK-----TPVSLVRSCSVFLYAD 145


>gi|296168350|ref|ZP_06850274.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295896781|gb|EFG76414.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 297

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 62/205 (30%), Gaps = 44/205 (21%)

Query: 1   MFDP-REKIALFIDGANLY-----------------------ASSKALGFDIDYRKLLKA 36
           M +P   ++A+++D  N+                         +++     +D   +L  
Sbjct: 1   MTEPVAARVAVYLDFDNIVISRYDQVNGRSSFQRDKAKGLEQYANRLDRSTVDVGAILDF 60

Query: 37  FRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKS 96
             S  I++    Y     D    +              F                   K+
Sbjct: 61  ASSFGILVLTRAYADWSADINAGYRGQLVARAVDLVQLF-------------PAAAYGKN 107

Query: 97  SMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMAS 153
             D+ LAVDA E       L H+VI +GD  +  L    +R  + V  +         +S
Sbjct: 108 GADIRLAVDAVEDMFRLPDLTHVVIVAGDSDYIPLAQRCKRLGRYVVGI----GVAGASS 163

Query: 154 DQLRRQADYFMDLAYLKNEIARDPD 178
             L    D F+    L    A +P 
Sbjct: 164 RALAAACDEFVVYDSLPGVPALEPQ 188


>gi|301166431|emb|CBW26007.1| hypothetical protein BMS_1128 [Bacteriovorax marinus SJ]
          Length = 190

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 61/167 (36%), Gaps = 28/167 (16%)

Query: 6   EKIALFIDGANLYAS----SKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
           +++A+ +DG N+  S    S+     +++  L+        + R  Y+            
Sbjct: 9   QQVAVLVDGNNIERSIHAESERHSTMLNFDTLIPKLLVNRGLNRLIYFR----------- 57

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
                                     +   +    S D+ L++ A + ++ ++ ++I SG
Sbjct: 58  ---------EGKNISSKLAERLHDKYHGSVRPCHKSADIPLSIKATQLAQKVDTIIIMSG 108

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
           D  +  LV  L+ +  +V I +      S  S  L  +ADYF  +  
Sbjct: 109 DSDYIELVNHLKSEGVRVEIAAI----ESTTSHLLIEEADYFHPITS 151


>gi|254884216|ref|ZP_05256926.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|254837009|gb|EET17318.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
          Length = 217

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 52/170 (30%), Gaps = 18/170 (10%)

Query: 1   MFDPRE-KIALFIDGANLYASSKALGFD----IDYRKLLKAFRSRAIVIRAYYYTTVVGD 55
           M +  + ++ ++IDG N Y   K   +     +D  KL+++F      + A  Y +    
Sbjct: 3   MAEKNKQRVIIYIDGFNFYYGLKTAPWKKYYWLDIVKLMESFLRPNQELIAVKYFSARPT 62

Query: 56  PEQQFSPLHPLLDWLHYNGF------QVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFE 108
              +             N        + + K  + F  +       +   DV +A     
Sbjct: 63  DVGKRKRQDAFFQANKENPKFKLILGKYLKKEIECFKCHNIIHTYEEKESDVRIATQIVA 122

Query: 109 QS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
            +     +  +I S D      V   +     V     +   P   S  L
Sbjct: 123 DAFQHNCDLAIIVSADSDMIPAVELAKEAKINV----FIYFPPHQYSSNL 168


>gi|332672160|ref|YP_004455168.1| hypothetical protein Celf_3674 [Cellulomonas fimi ATCC 484]
 gi|332341198|gb|AEE47781.1| hypothetical protein Celf_3674 [Cellulomonas fimi ATCC 484]
          Length = 377

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 55/198 (27%), Gaps = 50/198 (25%)

Query: 7   KIALFIDGANLYASS------------------------------KALGFDIDYRKLLKA 36
           ++A++ID  N+  S                               +     +D   +L  
Sbjct: 8   RVAVYIDFDNIVISRYDQTFRRGEWQRDSARQHRMDAASDDLVDRRLAEARVDVGAILDY 67

Query: 37  FRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKS 96
             S   V+ +  Y          +              F V                VK+
Sbjct: 68  ASSFGSVVVSRAYADWSVPANAGYQRQLVDRAVDLTQLFPV-------------TAGVKN 114

Query: 97  SMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMAS 153
             D+ L+VD  E       + H+V+ +GD  +  L    +R  + V  +          S
Sbjct: 115 GADIRLSVDVVEDLFRLPDVTHVVVVAGDSDYIALAQRAKRLGRYVVGI----GVAGATS 170

Query: 154 DQLRRQADYFMDLAYLKN 171
             L    D F D   L +
Sbjct: 171 RALMAACDEFADYDDLLD 188


>gi|301311616|ref|ZP_07217543.1| conserved hypothetical protein [Bacteroides sp. 20_3]
 gi|300830702|gb|EFK61345.1| conserved hypothetical protein [Bacteroides sp. 20_3]
          Length = 234

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 46/162 (28%), Gaps = 29/162 (17%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           +A+ IDG N                ++         +    Y             L    
Sbjct: 11  VAVLIDGDNASFER--------MEDIMGFVSRYGDAVVRRIYGDWT------RKALSAWK 56

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCF 125
           +    +GF++V        +       K++ D+ L +DA +       +   + + DG +
Sbjct: 57  ESAREHGFRLV--------QASSHVPGKNTTDIALVIDAMDILRDGQADCFCLVASDGDY 108

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
           + L   ++    KV                L R    F+   
Sbjct: 109 SLLAQRIREAGLKVLGYGEGK-----TPVSLVRSCSVFLYAD 145


>gi|269956699|ref|YP_003326488.1| hypothetical protein Xcel_1911 [Xylanimonas cellulosilytica DSM
           15894]
 gi|269305380|gb|ACZ30930.1| protein of unknown function DUF88 [Xylanimonas cellulosilytica DSM
           15894]
          Length = 484

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 61/179 (34%), Gaps = 30/179 (16%)

Query: 7   KIALFIDGANLYASS--------KALGFDIDYRKLLKAFRSRAI------VIRAYYYTTV 52
           + ++FID   L AS+           G  +++ KL++  R +A       V+R Y+Y + 
Sbjct: 4   RCSVFIDAGYLLASAATRVTGTSLRSGIHVEFSKLIEGIRRQAEQVSGLPVLRVYWYDSA 63

Query: 53  VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG 112
                                G        K      G    +  +D+ L +D    +  
Sbjct: 64  RNAVPDAQQQ---------RIGELPR---VKLRLGRFGIDGQQKGVDLRLGLDLVTHARN 111

Query: 113 --LEHLVIFSGDGCFTTLVAALQRKVKKVTIVS--TVLSDPSMASDQLRRQADYFMDLA 167
              E  ++ SGD  FT  V   Q    +V +++           S  L+R AD    + 
Sbjct: 112 QAAEVFLLVSGDDDFTEAVEEAQVHGVEVILLAAPDAHGSAHAVSRHLQRAADEVYVID 170


>gi|220903862|ref|YP_002479174.1| hypothetical protein Ddes_0587 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219868161|gb|ACL48496.1| protein of unknown function DUF88 [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
          Length = 240

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 57/162 (35%), Gaps = 25/162 (15%)

Query: 9   ALFIDGANLYA--------SSKALG----FDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP 56
           AL++D  N++         +++A G      + + +           +R      +    
Sbjct: 13  ALYVDFDNIFTRFLEIDPEAARAFGATPYRWVRWIENHALRILYGEGVRRR---ILKRMC 69

Query: 57  EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE---QSEGL 113
                      +    + FQVV              R K+S D+ L +D  +    S   
Sbjct: 70  YLNPQRYQEFRNSFIRSAFQVVDCP-------PLTSRGKTSTDIHLVMDCMDDLSHSTKF 122

Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQ 155
           +  +I SGD  FT L+  LQ   ++  ++S   S P+  +  
Sbjct: 123 DEFIILSGDADFTPLLIRLQEHARRTLVLSVGYSSPAYTAAA 164


>gi|325854879|ref|ZP_08171631.1| hypothetical protein HMPREF9303_1963 [Prevotella denticola CRIS
           18C-A]
 gi|325484061|gb|EGC86998.1| hypothetical protein HMPREF9303_1963 [Prevotella denticola CRIS
           18C-A]
          Length = 239

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 50/171 (29%), Gaps = 35/171 (20%)

Query: 1   MFDPRE------KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVG 54
           M D +        IA+ IDG N+  S+  LG       ++         I    Y     
Sbjct: 1   MTDKKPIRQEQTNIAVLIDGDNM--SADKLG------DIISFVSIYGNPIVRRIYADWTK 52

Query: 55  DPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--G 112
               ++              +      A  +        VK++ D+ L +DA +      
Sbjct: 53  PAMMRWK--------EEAKVYSFRLVEALSYVG------VKNTTDMTLVIDAMDLLHGKT 98

Query: 113 LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163
           ++   I S D  +T L   ++ +   V                LR     F
Sbjct: 99  VQGFCIVSSDSDYTLLAQRIREEGLLVLGYGEHK-----TPVALRNSCHDF 144


>gi|291298318|ref|YP_003509596.1| hypothetical protein Snas_0791 [Stackebrandtia nassauensis DSM
           44728]
 gi|290567538|gb|ADD40503.1| protein of unknown function DUF88 [Stackebrandtia nassauensis DSM
           44728]
          Length = 335

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 59/187 (31%), Gaps = 32/187 (17%)

Query: 7   KIALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSR-------AIVIRAYYYTT 51
           + A+ ID   LYA++  +         + +D  KL+    +R         ++R Y++  
Sbjct: 15  RYAMLIDVGYLYAAAAEVLLGATSRREYKVDAEKLINTLITRAADQLPGGELLRVYWFDA 74

Query: 52  VVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE 111
                                        + K    N   +  +  +D  +  D  + + 
Sbjct: 75  ARDRVPTVDQR------------VIAAMALVKVRLGNLNSRGQQKGVDAMIRTDLEQLAR 122

Query: 112 G--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
              +   ++ +GD      V   Q    +V +        +  +++L  +AD    L  +
Sbjct: 123 HGAISEAILLAGDEDMVPAVEIAQAYGVRVHVWGVEPPYGTNQAERLLWEAD---TLDEI 179

Query: 170 KNEIARD 176
             E  + 
Sbjct: 180 SAEFCKP 186


>gi|297619281|ref|YP_003707386.1| hypothetical protein Mvol_0754 [Methanococcus voltae A3]
 gi|297378258|gb|ADI36413.1| protein of unknown function DUF88 [Methanococcus voltae A3]
          Length = 253

 Score = 82.0 bits (201), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 60/180 (33%), Gaps = 36/180 (20%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           K+AL IDG N+        F++D  K+  A      ++    Y                L
Sbjct: 24  KMALLIDGPNM----LRKEFNVDLDKIRDAVEQFGTIVVGRVYLN--------QYASDKL 71

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGC 124
           ++ +   GF+                     +DVE+AVD  +      ++ +V  + D  
Sbjct: 72  IEAIANQGFEPRI--------------SAGDVDVEMAVDGTDLVHNKNIDTIVYMTRDAD 117

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM----DLAYLKNEIARDPDED 180
           F   +   +     + +V          S  ++  AD+ +    D    K ++ +   E 
Sbjct: 118 FLPAMRKAKENGVGIIVVGAEPGF----SMAIQNIADHVIKVEEDFELNKQKLEQKKRER 173


>gi|45358613|ref|NP_988170.1| hypothetical protein MMP1050 [Methanococcus maripaludis S2]
 gi|44921371|emb|CAF30606.1| conserved hypothetical protein [Methanococcus maripaludis S2]
          Length = 215

 Score = 81.6 bits (200), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 64/181 (35%), Gaps = 38/181 (20%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           K+AL IDG N+        F++D  K+  A      ++    Y                L
Sbjct: 22  KMALLIDGPNM----LRKEFNVDLDKVRDALEQFGDIVVGRVYLN--------QYASDKL 69

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124
           ++ +   GF+                     +DVE+AV+  E    + ++ +V  + D  
Sbjct: 70  IEAIANQGFEPRI--------------SAGDVDVEMAVEGTELIFNKNIDTIVYMTRDAD 115

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM------DLAYLKNEIARDPD 178
           F   +   + + K++ +V          S  ++  AD+ +      +L   K E  +   
Sbjct: 116 FLPAIRKAKERGKQIIVVGAEPGF----STAIQNIADHVIRVEEDFELDKEKLEQKKRDR 171

Query: 179 E 179
           E
Sbjct: 172 E 172


>gi|88810791|ref|ZP_01126048.1| hypothetical protein NB231_16963 [Nitrococcus mobilis Nb-231]
 gi|88792421|gb|EAR23531.1| hypothetical protein NB231_16963 [Nitrococcus mobilis Nb-231]
          Length = 196

 Score = 81.6 bits (200), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 72/200 (36%), Gaps = 33/200 (16%)

Query: 5   REKIALFIDGANLYAS-SKALGFD--IDYRKLLKAFRSR-AIVIRAYYYTTVVGDPEQQF 60
            +++   IDG+ ++A+  +  G    +DY +L +       ++ R YY  +V  D     
Sbjct: 1   MKRLW-LIDGSYIHANNIQRFGPHTRVDYLRLRRLIEEHLGVLWRGYYLNSVQSDAHSAR 59

Query: 61  SPLHPLLDWLHYNGFQVVAKVA------------------------KEFTENCGRKRVKS 96
              H  L     NG  ++ K+                             ++    + + 
Sbjct: 60  ERFHSWLQSAAPNGPHLIVKLYGLKNERVENAFCVDCGTKIEVCCPHGGPDHHLVNQRQM 119

Query: 97  SMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
            +DV LA  A    E  + LV+ SGDG     V  L    K++ +           S  L
Sbjct: 120 GVDVGLATLALAHKERYDCLVLSSGDGDLLDAVEHLCENGKRIELAVFSTGV----STDL 175

Query: 157 RRQADYFMDLAYLKNEIARD 176
           + +AD  + +    +E+A  
Sbjct: 176 QARADRVLWIDDHMDELAAP 195


>gi|218888135|ref|YP_002437456.1| hypothetical protein DvMF_3051 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218759089|gb|ACL09988.1| protein of unknown function DUF88 [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 418

 Score = 81.6 bits (200), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 67/184 (36%), Gaps = 32/184 (17%)

Query: 8   IALFIDGANLYASSKALGFDI------DYRKLLKAFRS------RAIVIRAYYYTTVVGD 55
            AL++D  N+Y+  +    DI      + ++ +K              +R      +   
Sbjct: 12  AALYVDFDNIYSRLREQDEDIARAFATNPQRWVKWIEGHALRMLYGDGVRRR---ILKRI 68

Query: 56  PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE---QSEG 112
                   H    +     FQVV              + K+S D+ L +D  +    S  
Sbjct: 69  CYMNPQCFHEFRPFFIRAAFQVVDCP-------PLTNQGKTSADIHLVMDCMDALNHSTR 121

Query: 113 LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMA---SDQLRRQADYFMD--LA 167
            +  +I SGD  FT L+  LQ   ++  ++S   + P+     S ++R   D+F+   L 
Sbjct: 122 FDEFIILSGDADFTPLLIRLQEHARRPLVLSVGYTSPAYTAAASWRIRE--DWFVQQALE 179

Query: 168 YLKN 171
             + 
Sbjct: 180 DERP 183


>gi|294778673|ref|ZP_06744093.1| conserved hypothetical protein [Bacteroides vulgatus PC510]
 gi|294447485|gb|EFG16065.1| conserved hypothetical protein [Bacteroides vulgatus PC510]
          Length = 234

 Score = 81.6 bits (200), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 50/169 (29%), Gaps = 29/169 (17%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           +A+ IDG N                ++         +    Y             L    
Sbjct: 11  VAVLIDGDNASFE--------KMEDIMGFVSRYGDAVVRRIYGDWT------RKSLSAWK 56

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCF 125
           +    +GF++V        +       K++ D+ L +DA +       +   + + DG +
Sbjct: 57  ETAREHGFRLV--------QASSHAPGKNTTDIALVIDAMDILRDGRADCFCLVASDGDY 108

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
           + L   ++    KV                L R    F+     +N ++
Sbjct: 109 SLLAQRIREAGLKVLGYGEDK-----TPVSLVRSCSVFLYADRKENRVS 152


>gi|257068962|ref|YP_003155217.1| hypothetical protein Bfae_18070 [Brachybacterium faecium DSM 4810]
 gi|256559780|gb|ACU85627.1| Protein of unknown function DUF88 [Brachybacterium faecium DSM
           4810]
          Length = 335

 Score = 81.6 bits (200), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 58/213 (27%), Gaps = 50/213 (23%)

Query: 1   MFDPRE-KIALFIDGANL-------YASSKALGFD---------------------IDYR 31
           M D ++ ++A+++D  N+           +A   D                     +D  
Sbjct: 1   MADSQDPRVAVYLDFDNIVMSWYDRVHGRQAYSRDRQRIAEDPTEPEIAERLAKATVDVG 60

Query: 32  KLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGR 91
            ++    S   ++    Y          +              F                
Sbjct: 61  AVIDYAASFGSLMLTRAYADWSSPVNAIYRSQLVARAVDLVQLF-------------PAA 107

Query: 92  KRVKSSMDVELAVDAFE---QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSD 148
              K+  D+ LAVD  E       L H+VI +GD  +  L    +R  + V  +      
Sbjct: 108 AYAKNGADIRLAVDTVEDLYLMPDLTHVVIVAGDSDYVPLAQRCRRLGRYVIAM----GV 163

Query: 149 PSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
               +  L    D F     L   + R     +
Sbjct: 164 AGSTAKSLAAACDEFESYENL-PGVERPTKPQR 195


>gi|154250322|ref|YP_001411147.1| hypothetical protein Fnod_1655 [Fervidobacterium nodosum Rt17-B1]
 gi|154154258|gb|ABS61490.1| protein of unknown function DUF88 [Fervidobacterium nodosum
           Rt17-B1]
          Length = 432

 Score = 81.2 bits (199), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 59/165 (35%), Gaps = 32/165 (19%)

Query: 10  LFI--DGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           +FI  D  N           +D + +    +    ++    Y +        +S      
Sbjct: 11  IFIMFDFQN---------QPVDVQLVYNEAQKYGRIVGGKAYGS--------WSKHKMPS 53

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG---LEHLVIFSGDGC 124
             L+  G +++     EF         K   D+ LAVD  E +     ++   + +GD  
Sbjct: 54  FVLYNYGIELIEIPEAEFL------PNKKGNDIRLAVDCVEIALHNNVIDTFFLVTGDAD 107

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
           FT LV  L+   KKV  ++   S    AS +L    D F+    +
Sbjct: 108 FTALVYKLKSYGKKVIALARTKS----ASYELVSAVDLFIPYEDI 148


>gi|295084937|emb|CBK66460.1| Uncharacterized conserved protein [Bacteroides xylanisolvens XB1A]
          Length = 207

 Score = 81.2 bits (199), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 58/175 (33%), Gaps = 19/175 (10%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLL-----KAFRSRAIVIRAYYYTTVVGDP 56
            + ++K+ +++DG N Y   K+  + + Y   L        +S   ++   Y++    D 
Sbjct: 1   MEDKKKVIVYVDGFNFYYGLKSKKWKMCYWLDLVSFFNSFLKSYQELVEVNYFSARPTDA 60

Query: 57  EQQFSPLHPLLDWLHYNGFQVVA-----KVAKE-FTENCGRKRVKSSMDVELAVDAFEQS 110
            +                F ++      K  K  +         +   DV +A      +
Sbjct: 61  GKHDRQDKLFQANKCNPKFNLILGKYLKKEIKCRYCGGIIHSFEEKETDVRIATKILSDA 120

Query: 111 --EGLEHLVIFSGDGCFTTLVAALQRKV--KKVTIVSTVLSDPSMASDQLRRQAD 161
             +  +  +I S D      V  ++     +KV +       P+  S  L   +D
Sbjct: 121 YKKRCDIAIIVSADSDLIPPVELIREFNPLQKVYV----YFPPNRYSSNLSNLSD 171


>gi|283851692|ref|ZP_06368970.1| protein of unknown function DUF88 [Desulfovibrio sp. FW1012B]
 gi|283572812|gb|EFC20794.1| protein of unknown function DUF88 [Desulfovibrio sp. FW1012B]
          Length = 193

 Score = 81.2 bits (199), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 61/190 (32%), Gaps = 29/190 (15%)

Query: 11  FIDGANLYASSKALG--FDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68
            ID   +Y         + IDY KL     S   + RAYY  +V           +  + 
Sbjct: 8   LIDAGYMYRGQSIYSREYSIDYVKLRNRLESEEPLWRAYYLNSVPHPTPDSQVAFYNWMR 67

Query: 69  WLHYNGFQVVAK---------------------VAKEFTENCGR--KRVKSSMDVELAVD 105
                G +++ K                           +   R  +  +  +DV LA  
Sbjct: 68  SAPPLGPKIITKLYELRSSEITDLYCEQDRRKVPVSCPNDRAHRLSREQQKGVDVGLATL 127

Query: 106 AFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165
           A    E  + L++ SGD      +  +  K K+  ++          S  L+ +AD    
Sbjct: 128 ALTHIENYDTLILSSGDSDLLDAIEYITEKNKRFELLVFKNGV----STDLQCRADRIYW 183

Query: 166 LAYLKNEIAR 175
           +     ++AR
Sbjct: 184 IDEFAQDVAR 193


>gi|256394876|ref|YP_003116440.1| hypothetical protein Caci_5741 [Catenulispora acidiphila DSM 44928]
 gi|256361102|gb|ACU74599.1| protein of unknown function DUF88 [Catenulispora acidiphila DSM
           44928]
          Length = 435

 Score = 81.2 bits (199), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 64/187 (34%), Gaps = 28/187 (14%)

Query: 5   REKIALFIDGANLYASS--------KALGFDIDYRKLLKAFRSRA------IVIRAYYYT 50
            ++ A+ +D   + A++           G ++DY  L+ A   RA       V+R Y+Y 
Sbjct: 1   MDRCAVLVDAGYVLAAAANVVSGDPGRPGIEVDYPGLVTALTERAAAETGLPVLRVYWYD 60

Query: 51  TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110
                   +   L  +LD     G ++         +    K  +  +D  L  D    +
Sbjct: 61  AAPATGPTRDQRLLRVLD-----GLKLRLGKLVRRDDG---KFEQKGVDTFLHADLTGLA 112

Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
               +  +V+ SGD      V   Q    ++ +           S +L    D  M L+ 
Sbjct: 113 RKRAVADVVLVSGDEDLLHAVEEAQEYGTRIHLWGAASDY--NQSLELIAAVDKSMTLSE 170

Query: 169 --LKNEI 173
             LK  +
Sbjct: 171 EWLKPYV 177


>gi|78357527|ref|YP_388976.1| hypothetical protein Dde_2484 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78219932|gb|ABB39281.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 439

 Score = 81.2 bits (199), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 54/162 (33%), Gaps = 25/162 (15%)

Query: 9   ALFIDGANLYASSKA------LGFDIDYRKLLKAFRSR------AIVIRAYYYTTVVGDP 56
           ALF+D  N+Y             F  D ++ ++              +R      +    
Sbjct: 13  ALFVDFDNIYTRLAEQDPQYGYLFATDPQRWMRWLEHHALRMLHGDGVRRR---ILKRCC 69

Query: 57  EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG---L 113
                           N F V              K+ K+S D+ L +DA +        
Sbjct: 70  YLNPQIFQDFRPHFVRNAFSVTDCP-------PLTKQGKTSADIHLVIDALDALSHPTYF 122

Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQ 155
           +  +I SGD  FT L+  L+   +K  ++S   + P+ A+  
Sbjct: 123 DEFIILSGDADFTPLLIRLREHARKTLVLSVGFTSPAYAAAS 164


>gi|298479635|ref|ZP_06997835.1| conserved hypothetical protein [Bacteroides sp. D22]
 gi|298274025|gb|EFI15586.1| conserved hypothetical protein [Bacteroides sp. D22]
          Length = 207

 Score = 81.2 bits (199), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 57/175 (32%), Gaps = 19/175 (10%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLL-----KAFRSRAIVIRAYYYTTVVGDP 56
            + ++K+ +++DG N Y   K+  + + Y   L        +    ++   Y++    D 
Sbjct: 1   MEDKKKVIVYVDGFNFYYGLKSKKWKMCYWLDLVSFFNSFLKPYQELVEVNYFSARPTDA 60

Query: 57  EQQFSPLHPLLDWLHYNGFQVVA-----KVAKE-FTENCGRKRVKSSMDVELAVDAFEQS 110
            +                F ++      K  K  +         +   DV +A      +
Sbjct: 61  GKHDRQDKLFQANKCNPKFNLILGKYLKKEIKCRYCGGIIHSFEEKETDVRIATKILSDA 120

Query: 111 --EGLEHLVIFSGDGCFTTLVAALQRKV--KKVTIVSTVLSDPSMASDQLRRQAD 161
             +  +  +I S D      V  ++     +KV +       P+  S  L   +D
Sbjct: 121 YKKRCDIAIIVSADSDLIPPVELIREFNPLQKVYV----YFPPNRYSSNLSNLSD 171


>gi|227834252|ref|YP_002835959.1| hypothetical protein cauri_2430 [Corynebacterium aurimucosum ATCC
           700975]
 gi|227455268|gb|ACP34021.1| hypothetical protein cauri_2430 [Corynebacterium aurimucosum ATCC
           700975]
          Length = 405

 Score = 81.2 bits (199), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 64/181 (35%), Gaps = 27/181 (14%)

Query: 6   EKIALFIDGANL---YASSKALGF----DIDYRKLLKAFRS------RAIVIRAYYYTTV 52
           E+  +F+D + L   + +S   G     +ID  +++ +  S         + R Y+Y  +
Sbjct: 3   ERTLVFVDTSYLLASFYNSWETGARAQLEIDLPEVVSSLGSMIENQVGNRIHRQYWYDGI 62

Query: 53  VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAF--EQS 110
                 ++     + D     G Q+      E+    G +R + ++D  L  D       
Sbjct: 63  PDTGPHRYQRALRVCD-----GVQLRTGQLIEW----GERRTQKAVDTRLVADMIVSAMK 113

Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
             +   V+ SGD      V        +V +        SM+S  LR   D    L   +
Sbjct: 114 GQVTDFVLVSGDADMIPGVQEAVNNGVRVHLYGF--GWDSMSS-ALRHACDSTTILDPRE 170

Query: 171 N 171
           +
Sbjct: 171 D 171


>gi|311743916|ref|ZP_07717722.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272]
 gi|311313046|gb|EFQ82957.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272]
          Length = 325

 Score = 81.2 bits (199), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 58/215 (26%), Gaps = 52/215 (24%)

Query: 1   MFDP-REKIALFIDGANLYASS-------------------------------KALGFDI 28
           M DP   ++A++ID  N+  S                                +     +
Sbjct: 1   MTDPGDPRVAVYIDFDNIVISRYDQVHGRHMWQRDKVRGYAPGEGGDTGDIGERLREATV 60

Query: 29  DYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTEN 88
           D   ++    S   ++    Y         ++             G  V           
Sbjct: 61  DVGAVIDYASSFGTLVLTRAYADWSAPVNAEYRHQL--------VGRAVDLVQL-----F 107

Query: 89  CGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTV 145
                 K+  D+ LAVDA E       L H+VI +GD  +  L    +R  + V  +   
Sbjct: 108 PAAAYAKNGADIRLAVDAVEDMFRLPDLTHVVIVAGDSDYIALAQRCKRLGRYVVGI--- 164

Query: 146 LSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
                  S  L    D  +    L       P + 
Sbjct: 165 -GVAGSTSKSLAAACDELVTYDALPGITPITPRQR 198


>gi|254819495|ref|ZP_05224496.1| hypothetical protein MintA_06199 [Mycobacterium intracellulare ATCC
           13950]
          Length = 200

 Score = 81.2 bits (199), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 61/206 (29%), Gaps = 46/206 (22%)

Query: 1   MFDP-REKIALFIDGANLY-----------------------ASSKALGFDIDYRKLLKA 36
           M +P   ++A+++D  N+                         S +     +D   +L  
Sbjct: 5   MTEPVAARVAVYLDFDNIVISRYDQIHGRNSFQKDKAKGLEQHSERLGQATVDVGAILDY 64

Query: 37  FRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKS 96
             S   ++    Y     D    +              F                   K+
Sbjct: 65  ASSFGTLVLTRAYADWSADINAGYRGQLVARAVDLVQLF-------------PAAAYGKN 111

Query: 97  SMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMAS 153
             D+ LAVDA E       L H+VI +GD  +  L    +R  + V  +         +S
Sbjct: 112 GADIRLAVDAVEDMFRLPDLTHVVIVAGDSDYIPLAQRCKRLGRYVVGI----GVAGASS 167

Query: 154 DQLRRQADYFMDLAYL--KNEIARDP 177
             L    + F+    L     + R+P
Sbjct: 168 RALAAACEEFVVYDALPGVPALDREP 193


>gi|227505072|ref|ZP_03935121.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940]
 gi|227198337|gb|EEI78385.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940]
          Length = 419

 Score = 81.2 bits (199), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 64/181 (35%), Gaps = 27/181 (14%)

Query: 6   EKIALFIDGANL---YASSKALGF----DIDYRKLLKAFRS------RAIVIRAYYYTTV 52
           E+  +F+D + L   + +S   G     +ID  +++    S         + R Y+Y  +
Sbjct: 3   ERTLVFVDTSYLLASFYNSWETGARAQLEIDLPEVVNNLGSMVENQLGNRIHRQYWYDGI 62

Query: 53  VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS-- 110
                 ++       D     G Q+      E+    G +R + ++D  L  D    +  
Sbjct: 63  PDTGPHRYQRALRTCD-----GVQLRTGQLIEW----GERRTQKAVDTRLVADMILAAMK 113

Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
           + +   V+ SGD      V        +V +        SM+S  LR   D    L   +
Sbjct: 114 QQVTDFVLVSGDADMIPGVQEAVNAGVRVHLYGF--GWDSMSS-ALRHACDTTTILDPRE 170

Query: 171 N 171
           +
Sbjct: 171 D 171


>gi|188992022|ref|YP_001904032.1| hypothetical protein xccb100_2627 [Xanthomonas campestris pv.
           campestris str. B100]
 gi|167733782|emb|CAP51987.1| Hypothetical protein xcc-b100_2627 [Xanthomonas campestris pv.
           campestris]
          Length = 266

 Score = 80.8 bits (198), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 34/183 (18%)

Query: 1   MFDPR----EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP 56
           M +       ++A+ +D  N+         DI    LL   +   +V+R           
Sbjct: 1   MSNSNSPLEPRVAVLVDCDNVPT-------DIVEHALLMVAQFGRVVLRR---------- 43

Query: 57  EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLE 114
              +     L +       +       ++    G    K++ D+ LA+DA E       +
Sbjct: 44  --GYGNHSTLANKWQEVLVRQAFTPCLQYRYASG----KNTADIALALDALEALFDHRAD 97

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
              + + D  F+ L   L+ +   V IV           D LR   D F +      E+A
Sbjct: 98  TFCLVTSDSDFSYLCRKLRERGATVFIVGE-----PKTPDALRNACDQFFEWDRTAKEVA 152

Query: 175 RDP 177
              
Sbjct: 153 APE 155


>gi|302342036|ref|YP_003806565.1| hypothetical protein Deba_0599 [Desulfarculus baarsii DSM 2075]
 gi|301638649|gb|ADK83971.1| protein of unknown function DUF88 [Desulfarculus baarsii DSM 2075]
          Length = 200

 Score = 80.8 bits (198), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 70/193 (36%), Gaps = 15/193 (7%)

Query: 4   PREKIALFIDGANLYASSKALG-FDIDYRKLLKAFRSRAIVIRAYYYTTVV-------GD 55
             +++A+ IDG  +       G   + + +L         ++R YYY  +         +
Sbjct: 2   HDKRVAVLIDGGYMDKILYEAGSMKVSFSRLANKLARGKPLLRTYYYHCLPHLSQRPTPE 61

Query: 56  PEQQFSPLHPLLDWLHYNG-FQVVAKVA--KEFTENCGRKRVKSSMDVELAVDA--FEQS 110
            +  ++      + L     F+V       + +     R   +  +DV LAVD      +
Sbjct: 62  EQTFYANKERFFNALRRLDDFEVRLGHLAPRGWDNAGNRILEQKGVDVYLAVDVCRLSYT 121

Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA-YL 169
             +  +++ +GDG     VA  +    KV +     S  +  S+QL    D    L   +
Sbjct: 122 GSVSEIILVAGDGDLAPAVALAKDLGIKVCLW-FGESPSTRVSEQLWYICDQRRALDVAI 180

Query: 170 KNEIARDPDEDKK 182
             E    P  +++
Sbjct: 181 LEECLLSPAPERR 193


>gi|296118467|ref|ZP_06837045.1| conserved hypothetical protein [Corynebacterium ammoniagenes DSM
           20306]
 gi|295968366|gb|EFG81613.1| conserved hypothetical protein [Corynebacterium ammoniagenes DSM
           20306]
          Length = 444

 Score = 80.8 bits (198), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 65/181 (35%), Gaps = 27/181 (14%)

Query: 6   EKIALFIDGANL---YASSKALGF----DIDYRKLLKAFRS------RAIVIRAYYYTTV 52
           E+  +F+D + L   + +S  +G     +ID  +++   RS         V R  +Y  +
Sbjct: 3   ERTVVFVDTSYLLASFYNSWEIGARGQLEIDLPEVVATLRSMIENQIGHPVHRQNWYDGI 62

Query: 53  VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS-- 110
                 ++       D     G Q+      E+    G +R + ++D  L  D    +  
Sbjct: 63  PDTGPHRYQRALRTCD-----GVQLRTGQLIEW----GERRTQKAVDTRLVADMVVTAMN 113

Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
           +     V+ SGD      V+       +V +        SM+S  LR   D    L   +
Sbjct: 114 QHFTDFVLVSGDADMIPGVSEATNNGMRVHLYGF--GWDSMSS-ALRHACDTTTILDPRE 170

Query: 171 N 171
           +
Sbjct: 171 D 171


>gi|150004082|ref|YP_001298826.1| hypothetical protein BVU_1517 [Bacteroides vulgatus ATCC 8482]
 gi|154491570|ref|ZP_02031196.1| hypothetical protein PARMER_01181 [Parabacteroides merdae ATCC
           43184]
 gi|149932506|gb|ABR39204.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
 gi|154088371|gb|EDN87416.1| hypothetical protein PARMER_01181 [Parabacteroides merdae ATCC
           43184]
          Length = 234

 Score = 80.8 bits (198), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 49/169 (28%), Gaps = 29/169 (17%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           +A+ IDG N                ++         +    Y             L    
Sbjct: 11  VAVLIDGDNASFE--------KMEDIMGFVSRYGDAVVRRIYGDWT------RKALSAWK 56

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCF 125
                +GF++V        +       K++ D+ L +DA +       +   + + DG +
Sbjct: 57  GIAREHGFRLV--------QASSHAPGKNTTDIALVIDAMDILRDGRADCFCLVASDGDY 108

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
           + L   ++    KV                L R    F+     +N ++
Sbjct: 109 SLLAQRIREAGLKVLGYGEDK-----TPVSLVRSCSVFLYADRKENRVS 152


>gi|51891180|ref|YP_073871.1| hypothetical protein STH42 [Symbiobacterium thermophilum IAM 14863]
 gi|51854869|dbj|BAD39027.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM
           14863]
          Length = 264

 Score = 80.8 bits (198), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 65/172 (37%), Gaps = 19/172 (11%)

Query: 7   KIALFIDGANLYASSKA-LGFDIDYRKL---LKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
           +  +F+D  N+Y S K   G   D  +L   L+    R        +     D E+    
Sbjct: 2   RSVIFMDYENIYWSMKQQYGVAPDLDRLITSLREMGERGNGQVCLMHAYADFDHEE---- 57

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIF 119
              L+  L     +     +K + +       K++ D+E+++DA E       ++  V+ 
Sbjct: 58  FRGLMSDLQRRSVEPRHVFSKNYEDGT----RKNAADIEMSLDALEIMYTRSDIDTFVLV 113

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
            GD     ++  L+ + K+V +V+   +     S  +    + F  +  L  
Sbjct: 114 CGDRDMIQVIRKLRARGKQVHVVAVEKTM----SKDVMSFVNQFTTIEALLG 161


>gi|161789278|ref|YP_001595776.1| hypothetical protein BMSF_0033 [Vibrio sp. 09022]
 gi|161761499|gb|ABX77143.1| conserved hypothetical protein [Vibrio sp. 09022]
          Length = 297

 Score = 80.4 bits (197), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 53/171 (30%), Gaps = 32/171 (18%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            +     A+ +DG N   S         Y+ +L+    +  +   + Y        + + 
Sbjct: 1   MNSTLNFAVLVDGENAQPS--------KYQDILREVSQKGNIASKWVYADWTNPTHKSWK 52

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVI 118
            +            +  +   ++F         K + D  L +DA E    S+ +  + I
Sbjct: 53  DIM----------LETGSAPKQQFHY------CKDAADHALIMDAIELICTSDKINAICI 96

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
            S DG F  L   +  K   V  V              R+    F+ +  +
Sbjct: 97  VSSDGGFAGLAQRISEKGLHVMAVG-----KKDTPAAFRKACHNFVYVENI 142


>gi|118618529|ref|YP_906861.1| hypothetical protein MUL_3170 [Mycobacterium ulcerans Agy99]
 gi|118570639|gb|ABL05390.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
          Length = 288

 Score = 80.4 bits (197), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 61/207 (29%), Gaps = 42/207 (20%)

Query: 1   MFDP-REKIALFIDGANL-------------YASSKALGFD--------IDYRKLLKAFR 38
           M D    ++A++ D  N+             +   K+ G +        +D   ++    
Sbjct: 1   MTDSSTSRVAVYFDFDNIVISRYEQVHGRNTFHRDKSKGLEQERLQLATVDLGAIIDFAS 60

Query: 39  SRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSM 98
           S   ++    Y     D    +             G  V                 K+  
Sbjct: 61  SFGTLVLTRAYADWSADVNAGYHGQL--------VGRAVDLVQL-----FPAASYGKNGA 107

Query: 99  DVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQ 155
           ++ LAVDA E       L H+VI  GD  +  L    +R  + V  +         +S  
Sbjct: 108 NIRLAVDAVEDMFRLPDLTHVVIVGGDSDYIALAQRCKRLGRYVVGI----GVAGASSGS 163

Query: 156 LRRQADYFMDLAYLKNEIARDPDEDKK 182
           L    D F+    L       P   KK
Sbjct: 164 LAAACDEFVTYDALPGIPTLPPPAAKK 190


>gi|239813866|ref|YP_002942776.1| hypothetical protein Vapar_0857 [Variovorax paradoxus S110]
 gi|239800443|gb|ACS17510.1| protein of unknown function DUF88 [Variovorax paradoxus S110]
          Length = 275

 Score = 80.4 bits (197), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 55/165 (33%), Gaps = 31/165 (18%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
           P  ++ L ID  N+ A       D+  + + +       V     Y       +QQ    
Sbjct: 3   PSLRVMLLIDADNVSA-------DVIEQAVQRTLAEHGAVHVRRAYCNAETALKQQALFK 55

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSG 121
              +  +                        K+S D+ LAVDA +   +E  + +V+ S 
Sbjct: 56  RLSVRPMVNLS------------------AGKNSTDIALAVDALDLVIAERPDVVVLVSS 97

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
           D  F  LV  L+ K  +V  +           ++     D F DL
Sbjct: 98  DSDFAPLVIRLREKGCRVCGL----GQQGKTGEETVAVYDEFTDL 138


>gi|85717621|ref|ZP_01048561.1| hypothetical protein NB311A_09801 [Nitrobacter sp. Nb-311A]
 gi|85695548|gb|EAQ33466.1| hypothetical protein NB311A_09801 [Nitrobacter sp. Nb-311A]
          Length = 268

 Score = 80.4 bits (197), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 65/191 (34%), Gaps = 31/191 (16%)

Query: 9   ALFIDGANLYASSKALG------FDIDYRKLLKAFRSR---------AIVIRAYYYTTVV 53
            +F+D  N+++S           F  D  + L AF+              +    Y   V
Sbjct: 7   GIFLDFDNVFSSLFKQSKEAAREFATDPARWLGAFQGMQGSENDETSHNFVIRRCYMNPV 66

Query: 54  GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE---QS 110
           G       P          +G++V+              + K+S D  + +D  +     
Sbjct: 67  GRVGNS-EPFSNFRQSFVRDGWEVIDTP-------PLTNQGKTSADTHIVMDVLDSVSHY 118

Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
             ++  V+ + D  +T LV  L++ +K   + + +       S   R   D  +D   + 
Sbjct: 119 PHVDEYVLMAADADYTPLVIRLRKHMKTTVVYAAMQ-----TSMAYRAACDSIIDERSML 173

Query: 171 NEIARDPDEDK 181
             + +  +E K
Sbjct: 174 EILEQKDEETK 184


>gi|296126610|ref|YP_003633862.1| hypothetical protein Bmur_1576 [Brachyspira murdochii DSM 12563]
 gi|296018426|gb|ADG71663.1| conserved hypothetical protein [Brachyspira murdochii DSM 12563]
          Length = 209

 Score = 80.4 bits (197), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 72/192 (37%), Gaps = 28/192 (14%)

Query: 5   REKIALFIDGANLYASSKALG----FDIDYRKLLKAFRSRAIVIR-AYYYTTVVGDPEQQ 59
            +K+  +IDG N+Y +   L       I+Y  L K+      +I   YY++         
Sbjct: 1   MDKVNFYIDGFNIYHAIDRLNNNKLKWINYYDLCKSLLKDNEIINKVYYFSAYAFWKPYS 60

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTEN-------------CGRKRVKSSMDVELAVDA 106
            +  +  +  L Y   +VV    K+ ++N                   +   DV +A+  
Sbjct: 61  QNNHYIFIQALKYFNVEVVLGNFKKKSKNLIINDNNGNIIKYNYEYHEEKESDVNIAIYL 120

Query: 107 FEQS--EGLEHLVIFSGDGCFTTLVAALQRKV--KKVTIVSTVLSDPSMASDQLRRQADY 162
              +     +  ++ SGD      +   + +    KV +V      P++ +  L+  +D 
Sbjct: 121 VRDACKRNCDKAILLSGDSDLVPAIKMAKEENADLKVGVVV----PPNVQASSLKNISD- 175

Query: 163 FMDLAYLKNEIA 174
             D+  LK +I+
Sbjct: 176 -FDIKLLKIDIS 186


>gi|294677711|ref|YP_003578326.1| hypothetical protein RCAP_rcc02189 [Rhodobacter capsulatus SB 1003]
 gi|294476531|gb|ADE85919.1| protein of unknown function DUF88 [Rhodobacter capsulatus SB 1003]
          Length = 249

 Score = 80.4 bits (197), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 60/164 (36%), Gaps = 36/164 (21%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
            E +A+ +DG NL  S++  G      ++    R+   V     Y       + Q  P  
Sbjct: 1   METVAVLVDGDNL--SARYAG------QIALRARAFGTVTVRRVYLDAQKATDWQGGPQ- 51

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGD 122
                    GF++               + K++ D+ LA+DA E +    ++  VI S D
Sbjct: 52  ---------GFRL-----------MHAGKGKNASDLLLALDAMELALREGVKRFVIASSD 91

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
             F+ L   L+   ++VT +              R   + F+ L
Sbjct: 92  RDFSHLALRLREYGRQVTGIGETK-----TPQIFRDACETFLTL 130


>gi|78047256|ref|YP_363431.1| hypothetical protein XCV1700 [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|78035686|emb|CAJ23377.1| conserved hypothetical protein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 266

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 59/186 (31%), Gaps = 41/186 (22%)

Query: 1   MFDPRE----KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP 56
           M +       ++A+ +D  N+         DI    LL   +   +V+R           
Sbjct: 1   MSNSNSPHEARVAVLVDCDNVPT-------DIVEHALLMVAQFGRVVLRR---------- 43

Query: 57  EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLE 114
              +   + L +       +       ++    G    K++ D+ LA+DA E       +
Sbjct: 44  --GYGNHNTLANKWQEVLVRQAFTPCLQYQYASG----KNTADIALALDALEALFDSRAD 97

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
              + + D  F+ L   L+ +   V IV           D LR   D F        E  
Sbjct: 98  TFCLVTSDSDFSYLCRKLRERGATVFIVGE-----PKTPDALRNACDQFF-------EWE 145

Query: 175 RDPDED 180
           R   E 
Sbjct: 146 RPAKEP 151


>gi|296268684|ref|YP_003651316.1| hypothetical protein Tbis_0698 [Thermobispora bispora DSM 43833]
 gi|296091471|gb|ADG87423.1| protein of unknown function DUF88 [Thermobispora bispora DSM 43833]
          Length = 304

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 63/192 (32%), Gaps = 31/192 (16%)

Query: 3   DPREKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSR-------AIVIRAY 47
            P  K AL +D   LYA++            F +   +L+K+ +           ++R Y
Sbjct: 10  HPTSKFALLVDVGYLYAAAGEVLLGAKERKEFRVRADELIKSLQKHAAERIPGGELLRVY 69

Query: 48  YYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAF 107
           +Y             +   L W             K    N   +  +  +D ++  D  
Sbjct: 70  WYDAARDRVPTVDQRVIAQLPW------------VKVRLGNLNARGQQKGVDAQIRSDLE 117

Query: 108 EQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YF 163
             +    +   ++ +GD      V A Q    +V +        +  +++L  ++D    
Sbjct: 118 ALARHHAVSDTILIAGDEDMVPAVEAAQAYGVRVHLWGVEPPFGTNQAERLVWESDTVEI 177

Query: 164 MDLAYLKNEIAR 175
           +   +L+    R
Sbjct: 178 LSADFLRPYFTR 189


>gi|76803018|ref|YP_331113.1| hypothetical protein NP4776A [Natronomonas pharaonis DSM 2160]
 gi|76558883|emb|CAI50479.2| conserved hypothetical protein [Natronomonas pharaonis DSM 2160]
          Length = 145

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 60/163 (36%), Gaps = 31/163 (19%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           ++ +F+DG N++       FD+D  +L         +  A  Y           +    L
Sbjct: 12  RVGIFVDGPNVF----RAEFDVDLDELRALAGDEGTIAVARVYV--------DENASGGL 59

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124
           +      GF+VV                   +DV+LAVDA E +  E ++ +V+ S D  
Sbjct: 60  IQAAEARGFEVVT--------------TSGDVDVKLAVDAVEAAVDEQVDTVVVVSRDTD 105

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
           F  ++    ++      V+         SD LR  A   + L 
Sbjct: 106 FKPVLETAAKRGLHTVAVAPGTHGR---SDALRNAAHDEITLE 145


>gi|271961974|ref|YP_003336170.1| hypothetical protein Sros_0396 [Streptosporangium roseum DSM 43021]
 gi|270505149|gb|ACZ83427.1| hypothetical protein Sros_0396 [Streptosporangium roseum DSM 43021]
          Length = 393

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 64/188 (34%), Gaps = 31/188 (16%)

Query: 5   REKIALFIDGANL-------YASSK-ALGFDIDYRKLLKAF------RSRAIVIRAYYYT 50
            ++ ALF+D   L          ++       DY  LLK        R+   ++R Y+Y 
Sbjct: 1   MDRCALFVDAGYLLADGAMAVHGTRHREAVSWDYPGLLKLLGNLSKERTGLPLLRCYWYE 60

Query: 51  TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110
             V                       +      +   +  R   +  +D ++  D    +
Sbjct: 61  ASVEGRRTAEHDA-------------LADLPGLKLRLSRIRPGRREGVDAQVHRDLMTLA 107

Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL-- 166
               +   V+ SGD     +V   Q    +VT+V          S  LR++ D  +++  
Sbjct: 108 RNSAVCDAVVVSGDEDLAQVVCDAQDLGIRVTVVHITADGSWAVSRSLRQECDDLIEIGS 167

Query: 167 AYLKNEIA 174
           ++L+  ++
Sbjct: 168 SHLRPYVS 175


>gi|332527372|ref|ZP_08403428.1| hypothetical protein RBXJA2T_15598 [Rubrivivax benzoatilyticus JA2]
 gi|332111781|gb|EGJ11761.1| hypothetical protein RBXJA2T_15598 [Rubrivivax benzoatilyticus JA2]
          Length = 429

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 65/196 (33%), Gaps = 41/196 (20%)

Query: 7   KIALFIDGANLYASSKAL------GFDIDYRKLLKAFRS------------RAIVIRAYY 48
           K ALF+D  N+++  + L       F     + +    S            R  ++    
Sbjct: 2   KSALFVDFDNVFSQLRQLQPDAAERFARHPSEWIGWLTSALALPEPHEDGERRRLLVRRC 61

Query: 49  YTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE 108
           Y           +            GF++V              + K+S D+ + +D  +
Sbjct: 62  YLNP--------NWYQTYRHAFLRAGFEIVDCP-------PVTSQGKTSTDIHMVLDIVD 106

Query: 109 QSEG---LEHLVIFSGDGCFTTLVAALQRKVKKVTI--VSTVLSDPSMASDQLRRQADYF 163
             +     +  ++FS D  FT ++  L+R  ++ T+  +    +    ++D L    D  
Sbjct: 107 LLQHETRCDEFIVFSADADFTPVLRKLRRYDRRTTVLAIGFPSAAYQASADLLI---DER 163

Query: 164 MDLAYLKNEIARDPDE 179
           + L          P+ 
Sbjct: 164 VFLRDALALAQPAPEA 179


>gi|83768358|dbj|BAE58497.1| unnamed protein product [Aspergillus oryzae]
          Length = 209

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 32/102 (31%), Gaps = 11/102 (10%)

Query: 70  LHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTT 127
                 +   +  ++F    G    K++ D  + +DA +   S   +   + S D  FT 
Sbjct: 4   WKDQLLKQSIQPIQQFAYTHG----KNATDSAMIIDAMDLLYSSRYDGFCLVSSDSDFTR 59

Query: 128 LVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
           L A ++     V       +     +         F+    L
Sbjct: 60  LAARIRESGLIVYGFGENHTPKPFVA-----ACSKFIYTENL 96


>gi|302341970|ref|YP_003806499.1| hypothetical protein Deba_0533 [Desulfarculus baarsii DSM 2075]
 gi|301638583|gb|ADK83905.1| protein of unknown function DUF88 [Desulfarculus baarsii DSM 2075]
          Length = 438

 Score = 80.1 bits (196), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 25/184 (13%), Positives = 60/184 (32%), Gaps = 37/184 (20%)

Query: 5   REKIALFIDGANLYASSKALGF---------------DIDYRKLLKAFRSRAIVIRAYYY 49
            + IA++ D  N+++S   L +                +D   +++   S+  V     Y
Sbjct: 1   MKNIAVYWDFENIHSSLCNLRYGEDWLDQFRGQRHPAVVDIGAIMQFAESQGSVNINKAY 60

Query: 50  TTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ 109
                                 ++  +    + + F         K+  D+ LA+DA + 
Sbjct: 61  GNWA------------WYQQYSHDLHEFTFDLVQLFPRGMNM---KNGADIRLAIDALDD 105

Query: 110 SEGLEH---LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
               EH    +I  GD  + +L   ++++ K++  +          +       + F   
Sbjct: 106 LNRHEHLSVFIIVGGDSDYISLAQRVRQRGKEIIGI----GVRETTNKFWINACNDFRFY 161

Query: 167 AYLK 170
           + + 
Sbjct: 162 SSIA 165


>gi|240171215|ref|ZP_04749874.1| hypothetical protein MkanA1_18021 [Mycobacterium kansasii ATCC
           12478]
          Length = 289

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 56/187 (29%), Gaps = 41/187 (21%)

Query: 7   KIALFIDGANLYAS-----------SKALGFDIDYRKL----------LKAFRSRAIVIR 45
           ++A++ D  N+  S            K  G  +D  +L          +    S   ++ 
Sbjct: 8   RVAVYFDFDNIVISRYDQVHGRGTFQKDKGKGLDPERLRAATVDLGAIMDFASSFGTLVL 67

Query: 46  AYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVD 105
              Y     +   ++             G  V                 K+  D+ LAVD
Sbjct: 68  TRAYADWSAEVNARYHGQL--------VGRAVDLVQL-----FPAAAYGKNGADIRLAVD 114

Query: 106 AFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162
           A E       L H+VI  GD  +  L    +R  + V  +         +S  L    D 
Sbjct: 115 AVEDMFRLPDLTHVVIVGGDSDYIALAQRCKRLGRYVVGI----GVAGASSQSLAAACDE 170

Query: 163 FMDLAYL 169
           F+    L
Sbjct: 171 FVTYDTL 177


>gi|149203752|ref|ZP_01880721.1| hypothetical protein RTM1035_06788 [Roseovarius sp. TM1035]
 gi|149142869|gb|EDM30911.1| hypothetical protein RTM1035_06788 [Roseovarius sp. TM1035]
          Length = 232

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 57/172 (33%), Gaps = 37/172 (21%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
             P  +++ F+D  N+  +       +D    L        ++RAY    ++ D ++   
Sbjct: 9   LTPAPRLSAFVDAENIPVT--HARTILD----LARRYGDPDLLRAYGNVGLLSDWDK--- 59

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIF 119
                                 +F  +      K++ D+ + VDA E   S+    +++ 
Sbjct: 60  ------------------LPGFQFIHSG---CGKNATDMLICVDAMERALSDQCAAVLLV 98

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
           S D  FT L   L+     V             S++ R     F +L   + 
Sbjct: 99  SSDQDFTHLATRLRGYGLTVIGAGEAK-----TSERFRAACSVFEELEGCRE 145


>gi|119486459|ref|ZP_01620517.1| hypothetical protein L8106_00655 [Lyngbya sp. PCC 8106]
 gi|119456361|gb|EAW37492.1| hypothetical protein L8106_00655 [Lyngbya sp. PCC 8106]
          Length = 428

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 57/162 (35%), Gaps = 13/162 (8%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           +A+F D  NL     +    I+   L   F     + R  +              L  + 
Sbjct: 5   VAIFYDIENLLKGYGSSQNYINSISLKYVFNKIKSIERVEFIAVQRAYANWSDPRLSVMK 64

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGC 124
             ++  G        + F     R   K++ D++LAVDA + +     +E  VI SGDG 
Sbjct: 65  GEINELGID----PIQIF--GFSRNTHKNAADIQLAVDAIDLAYLRNYIEIFVIVSGDGG 118

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
           F+ L   L    K V   +      +  +       D F+ +
Sbjct: 119 FSALAKKLHEYGKYVIGCA----YFNATNKIFESVCDVFIGI 156


>gi|315608482|ref|ZP_07883469.1| conserved hypothetical protein [Prevotella buccae ATCC 33574]
 gi|315249808|gb|EFU29810.1| conserved hypothetical protein [Prevotella buccae ATCC 33574]
          Length = 239

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 47/157 (29%), Gaps = 29/157 (18%)

Query: 9   ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68
           A+ IDG N+  ++  LG       ++    S    I    Y        +++        
Sbjct: 15  AILIDGDNV--AADKLG------DIISFVSSYGNPIIRRIYADWTKSAMKRWK------- 59

Query: 69  WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCFT 126
                 F      A  +         K++ D+ L +DA +      ++   I S D  +T
Sbjct: 60  -EEAKTFSFRLVEALSYVGM------KNTTDMALVIDAMDLLHGKTVQGFCIVSSDSDYT 112

Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163
            L   ++ +   V                L+     F
Sbjct: 113 LLAQRIREEGLLVLGYGEQK-----TPASLQNSCHEF 144


>gi|258510539|ref|YP_003183973.1| hypothetical protein Aaci_0532 [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|257477265|gb|ACV57584.1| protein of unknown function DUF88 [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
          Length = 321

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 68/196 (34%), Gaps = 37/196 (18%)

Query: 3   DPREKIALFIDGANLYASS-KALGFDID--------YRKLLKAFRSRAIVIRAYYYTTVV 53
           D  + +A+F+D  N+Y +         D        + KL   +      +R +      
Sbjct: 50  DKMDNVAIFVDYDNVYWTLYNNYRHHPDHGDDDKNLFVKLWDFY--GRDNVRIFKAYADF 107

Query: 54  GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--- 110
              +   + L      + +            +      +  K++ D+EL++DA E +   
Sbjct: 108 EQIKSDLTRLQKRRVQIRH-----------VYANGKTEQGRKNASDIELSIDAIELTHTD 156

Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD------YFM 164
             +   VI + D     L++ L  K K+V +     +        LR  A        F+
Sbjct: 157 PEITCYVIVTADSDMIPLMSRLMYKGKRVELFYIESALAKHT--DLRNYAHISRDLITFL 214

Query: 165 DLA----YLKNEIARD 176
           ++      ++++IA  
Sbjct: 215 NVDTTPIDIRDKIAEA 230


>gi|319791587|ref|YP_004153227.1| hypothetical protein Varpa_0898 [Variovorax paradoxus EPS]
 gi|315594050|gb|ADU35116.1| protein of unknown function DUF88 [Variovorax paradoxus EPS]
          Length = 279

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 58/167 (34%), Gaps = 31/167 (18%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
           P  ++ L ID  N+ A       D+  + + +       V     Y        +Q    
Sbjct: 12  PTLRVMLLIDADNVSA-------DVIEQAVQRTMDEYGAVHVRRAYCNAEMAVNRQALFK 64

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSG 121
              +  +                        K+S D+ LAVDA +   +E  + +V+ S 
Sbjct: 65  QLSVRPMVNLS------------------AGKNSTDIALAVDAIDLVIAERPDVVVLVSS 106

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
           D  F  LV+ L+ K  +V  +           D+     D F+DLA+
Sbjct: 107 DSDFAPLVSRLREKGCRVCGI----GQQGKTGDETVGIYDTFIDLAH 149


>gi|303244983|ref|ZP_07331306.1| protein of unknown function DUF88 [Methanothermococcus okinawensis
           IH1]
 gi|302484635|gb|EFL47576.1| protein of unknown function DUF88 [Methanothermococcus okinawensis
           IH1]
          Length = 238

 Score = 79.7 bits (195), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 57/164 (34%), Gaps = 32/164 (19%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           ++AL +DG N+        F+ID  K+ +       ++    Y                L
Sbjct: 22  RMALLVDGPNM----LRKEFNIDLDKIREVLDEFGTIVIGRVYLN--------QYASDKL 69

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124
           ++ +   GF+                     +DVE+AV+  E      ++ +V  + D  
Sbjct: 70  IEAIANQGFEPRI--------------SAGDVDVEMAVEGTELIFNNNIDTIVYMTRDAD 115

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
           F   +   +   KK+ ++          S  ++  AD+ + +  
Sbjct: 116 FLPAIRKAKEHGKKIIVIGAEPGF----STAIQNIADHVIKIEE 155


>gi|25809033|gb|AAN74629.1| hypothetical protein [Gram-negative bacterium 0471]
          Length = 306

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 53/171 (30%), Gaps = 32/171 (18%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            +     A+ +DG N   S         Y+ +L+    +  +   + Y        + + 
Sbjct: 1   MNSTLNFAVLVDGENAQPS--------KYQDILREVSQKGNIASKWVYADWTNPTHKSWK 52

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVI 118
            +            +  +   ++F         K + D  L +DA E    S+ +  + I
Sbjct: 53  DIM----------LETGSAPKQQFHY------CKDAADHALIMDAIELICTSDKINAICI 96

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
            S DG F  L   +  K   V  V              R+    F+ +  +
Sbjct: 97  VSSDGGFAGLAQRISEKGLHVMAVG-----KKDTPAAFRKACHNFVYVENI 142


>gi|325851759|ref|ZP_08170981.1| hypothetical protein HMPREF9303_0793 [Prevotella denticola CRIS
           18C-A]
 gi|325484715|gb|EGC87625.1| hypothetical protein HMPREF9303_0793 [Prevotella denticola CRIS
           18C-A]
          Length = 239

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 49/158 (31%), Gaps = 29/158 (18%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           IA+ IDG N+  ++  LG       ++    S    I    Y        +++       
Sbjct: 14  IAILIDGDNV--AADKLG------DIISFVSSYGNPIIRRIYADWTKSAMKRWK------ 59

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCF 125
                  F      A  +        VK++ D+ L ++A +      ++   I S D  +
Sbjct: 60  --EEAKTFSFRLVEALSYVG------VKNTTDMALVIEAMDLLHGKTVQGFCIVSSDSDY 111

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163
           T L   ++ +   V                L+     F
Sbjct: 112 TLLAQRIREEGLLVLGYGEQK-----TPASLQNSCHEF 144


>gi|169825423|ref|YP_001695598.1| hypothetical protein Bsph_p009 [Lysinibacillus sphaericus C3-41]
 gi|168994700|gb|ACA42239.1| conserved hypothetical protein [Lysinibacillus sphaericus C3-41]
          Length = 181

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 66/173 (38%), Gaps = 14/173 (8%)

Query: 5   REKIALFIDGANLYASSKALGFD-ID----YRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
            +K A+ +D  N+    + LG    +    + + L+ +      ++A+Y   V  +  + 
Sbjct: 1   MKKTAILVDEMNVIQQLRRLGIHGFNPWNAFYQALQRWNGDKKGVKAFYCANVPKEDAEH 60

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG-LEHLVI 118
               +   + L  +  +V          +   +R+   +DV LA+D  E +   ++ + I
Sbjct: 61  EKR-NNFFEGLINHNIKVSVGTVV---YDSNSRRIAKGVDVALALDIVEHARSGVQDIFI 116

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
            +GD      +   Q    +V +V       ++ +  +   AD  + L  +  
Sbjct: 117 CTGDADVVPAIIRAQELGSRVHVVV----SRAIPAKNITLAADSVVRLEDILE 165


>gi|303325412|ref|ZP_07355855.1| conserved hypothetical protein [Desulfovibrio sp. 3_1_syn3]
 gi|302863328|gb|EFL86259.1| conserved hypothetical protein [Desulfovibrio sp. 3_1_syn3]
          Length = 228

 Score = 78.9 bits (193), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 65/189 (34%), Gaps = 30/189 (15%)

Query: 9   ALFIDGANLYA--------SSKALG----FDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP 56
           AL++D  N+Y         +++  G      + + +           +R      +    
Sbjct: 27  ALYVDFDNIYTRFLEADPEAARTFGSAPYRWVRWIENHALRILYGEGVRRR---ILKRMC 83

Query: 57  EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE---QSEGL 113
                      +    + FQVV              R K+S D+ L +D  +    S   
Sbjct: 84  YLNPQRYQEFRNPFIRSAFQVVDCP-------PLTSRGKTSTDIHLVMDCMDDLSHSTHF 136

Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
           +  +I SGD  FT L+  LQ   ++  ++S   S P+  +      A + +   +   + 
Sbjct: 137 DEFIILSGDADFTPLLIRLQEHARRTLVLSVGYSSPAYTA-----AASWRIREDWFLQQA 191

Query: 174 ARDPDEDKK 182
            +D   D +
Sbjct: 192 LKDDRSDDE 200


>gi|258648761|ref|ZP_05736230.1| conserved hypothetical protein [Prevotella tannerae ATCC 51259]
 gi|260851088|gb|EEX70957.1| conserved hypothetical protein [Prevotella tannerae ATCC 51259]
          Length = 238

 Score = 78.9 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 56/168 (33%), Gaps = 18/168 (10%)

Query: 3   DPREKIALFIDGANLYASSK-----ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
           + ++++ ++IDG N Y   K        + +D  KL ++F      + A  Y +   D  
Sbjct: 24  EEKQRVIVYIDGFNFYYGLKFTARWRKYYWLDVVKLFESFMRPNQELIAVKYFSAKPDDI 83

Query: 58  QQFSPLHPLLDWLHYNGF------QVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQS 110
           +Q    +        N        + + K    F          +   DV +A      +
Sbjct: 84  EQSRRQNAFFQANKENPKFRLILGKYLKKEITCFKCKNVIHTYEEKETDVRIATQIVADA 143

Query: 111 --EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
             +  +  ++ S D      +    +  +KV     V   P+  S  L
Sbjct: 144 YQKNCDVAIVVSADSDMVPAIELATQARQKV----FVYFPPNQYSSNL 187


>gi|282895639|ref|ZP_06303764.1| hypothetical protein CRD_00263 [Raphidiopsis brookii D9]
 gi|281199333|gb|EFA74198.1| hypothetical protein CRD_00263 [Raphidiopsis brookii D9]
          Length = 96

 Score = 78.9 bits (193), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 4/83 (4%)

Query: 94  VKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMAS 153
              +++VE+AVD    +   +  V+ SGDG     V A+     +V ++       +M S
Sbjct: 3   KNPNLNVEIAVDMITLAPYYDTAVLVSGDGDLAYAVNAVTSLGSRVEVI----GLQTMTS 58

Query: 154 DQLRRQADYFMDLAYLKNEIARD 176
           D L   ADYF+D   +K  I +D
Sbjct: 59  DSLIDVADYFIDFDSIKQYIQKD 81


>gi|145225022|ref|YP_001135700.1| hypothetical protein Mflv_4443 [Mycobacterium gilvum PYR-GCK]
 gi|145217508|gb|ABP46912.1| protein of unknown function DUF88 [Mycobacterium gilvum PYR-GCK]
          Length = 329

 Score = 78.5 bits (192), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 65/204 (31%), Gaps = 45/204 (22%)

Query: 7   KIALFIDGANLYASS-------------KALGFD----------IDYRKLLKAFRSRAIV 43
           ++A+++D  N+  S              KA GFD          +D   ++    S   +
Sbjct: 35  RVAVYLDFDNIVLSRYDQVNGRNSFQRDKAKGFDEVRDKLDRATVDVGAIIDFASSFGTL 94

Query: 44  IRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELA 103
           +    Y     +   ++             G  V                 K+  D+ LA
Sbjct: 95  VLTRAYADWSAEINARYRGQL--------VGRAVDLVQL-----FPAAAYGKNGADIRLA 141

Query: 104 VDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160
           VDA E       L H+VI +GD  +  L    +R  + V  +         +S  L    
Sbjct: 142 VDAVEDMFRLPDLTHVVIVAGDSDYIALAQRCKRLGRYVVGI----GVAGSSSRMLAAAC 197

Query: 161 DYFMDLAYL--KNEIARDPDEDKK 182
           D F+    L        +P  D+K
Sbjct: 198 DEFVTYDTLPGVPVFEPEPVADEK 221


>gi|312136340|ref|YP_004003677.1| hypothetical protein Mfer_0112 [Methanothermus fervidus DSM 2088]
 gi|311224059|gb|ADP76915.1| protein of unknown function DUF88 [Methanothermus fervidus DSM
           2088]
          Length = 174

 Score = 78.5 bits (192), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 58/175 (33%), Gaps = 32/175 (18%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           I L +DG N+        F ++  ++ +       +         VG           L+
Sbjct: 28  IGLLVDGPNM----LRKEFKLNLEQVKEILSEYGNL--------KVGKVLLNQYASDKLI 75

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCF 125
           + +   GF  +               V    DV +A++A E      ++ + + + D  F
Sbjct: 76  EAISNQGFSPIV--------------VAGDTDVYMAIEAMELIYNPNIDIIALMTRDADF 121

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
             ++   +   K+  ++          S  L+  AD+ + L   K     +  ++
Sbjct: 122 LPIINKAKENGKETIVIGAEPGF----SVALKNAADHTIILRSKKEGNEDEDSKN 172


>gi|323359351|ref|YP_004225747.1| hypothetical protein MTES_2903 [Microbacterium testaceum StLB037]
 gi|323275722|dbj|BAJ75867.1| uncharacterized conserved protein [Microbacterium testaceum
           StLB037]
          Length = 286

 Score = 78.5 bits (192), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 52/195 (26%), Gaps = 48/195 (24%)

Query: 6   EKIALFIDGANLYASS----------------------------KALGFDIDYRKLLKAF 37
            ++A+++D  N+  S                             +     ID   ++   
Sbjct: 7   PRVAVYLDFDNIVMSWYDRVHGRNAYSRDRQKIAENPMDPEIAERLTKATIDVGAVIDYA 66

Query: 38  RSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSS 97
            S   ++    Y         ++              F                   K+ 
Sbjct: 67  ASFGTLVLTRAYADWSAPVNAEYRSQLVARAVDLVQLF-------------PAAAYAKNG 113

Query: 98  MDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASD 154
            D+ LAVDA E       L H+VI +GD  +  L    +R  + V  V          + 
Sbjct: 114 ADIRLAVDAVEDMFRLPDLTHVVIVAGDSDYVPLAQRCKRLGRYVVGV----GVAGSTAK 169

Query: 155 QLRRQADYFMDLAYL 169
            L    D F     L
Sbjct: 170 SLAAACDRFDSYDSL 184


>gi|307320472|ref|ZP_07599888.1| protein of unknown function DUF88 [Sinorhizobium meliloti AK83]
 gi|306893885|gb|EFN24655.1| protein of unknown function DUF88 [Sinorhizobium meliloti AK83]
          Length = 259

 Score = 78.5 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 24/156 (15%), Positives = 42/156 (26%), Gaps = 29/156 (18%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           +AL IDG N   S            LL    +  +           G   + +       
Sbjct: 6   LALLIDGDNASPSI--------VTGLLAEIANYGVASVKRINGDWTGPNLKGWK------ 51

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCF 125
                   +   +  ++F    G    K++ D  + ++A +   +       I S D  F
Sbjct: 52  ----DCLVEHSIQRVQQFAYTTG----KNATDGAMIIEAMDLLYTGRFSGFCIVSSDSDF 103

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
             L A L  +   V       +             D
Sbjct: 104 ARLAARLPEQGVAVYGFGERKTPRP-----FVTACD 134


>gi|72163404|ref|YP_291061.1| hypothetical protein Tfu_3005 [Thermobifida fusca YX]
 gi|71917136|gb|AAZ57038.1| hypothetical protein Tfu_3005 [Thermobifida fusca YX]
          Length = 516

 Score = 78.5 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 60/187 (32%), Gaps = 31/187 (16%)

Query: 5   REKIALFIDGANL-------YASSK-ALGFDIDYRKLLKAFRSRAI------VIRAYYYT 50
            ++ ALF+D   L          ++       DY  L++     A        +R Y+Y 
Sbjct: 1   MDRCALFVDAGYLLAEGAMAVHGTRDRDSVSWDYAALVQLLNEVARDRTGLPPLRCYWYE 60

Query: 51  TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110
            V      Q                 +      +F     R   +  ++  +  D    +
Sbjct: 61  AVTDSRRSQEQEG-------------IAEIPGVKFRAARIRPGRREGVENYVQKDLIPLA 107

Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL-- 166
               +   V+  GD     ++A  Q    +VT+V   +      S  LR + D  +++  
Sbjct: 108 RNRAICDAVLVCGDEDMAPVIAEAQEYGVRVTVVHISIEGNWTVSRALRHECDDLIEIGA 167

Query: 167 AYLKNEI 173
            +L+  +
Sbjct: 168 GHLRPHV 174


>gi|297192241|ref|ZP_06909639.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
           25486]
 gi|297151272|gb|EDY63689.2| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 312

 Score = 78.5 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 61/188 (32%), Gaps = 31/188 (16%)

Query: 9   ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53
           A+F+D   +YA++  L         FD+D   L++AF  +A        ++R Y+Y    
Sbjct: 48  AIFVDAGYVYAAAGLLVAGTEDRRSFDLDAEGLIEAFIDKARTIFADSRLLRVYWYDGAR 107

Query: 54  GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
                        L               K    N      +  +D  +  D    +   
Sbjct: 108 RRIHTSEQQAIAELP------------DVKVRLGNLNANNQQKGVDSLIRTDLESLARHR 155

Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169
            +    +  GD    + V A Q    +V +      +    ++ L  + D     DL + 
Sbjct: 156 AISDAALVGGDEDLVSAVEAAQGYGARVHLWGIEAGEGRNQAEPLLWEVDSQRTFDLDFC 215

Query: 170 KNEIARDP 177
           +  I R P
Sbjct: 216 RPYITRRP 223


>gi|126433513|ref|YP_001069204.1| hypothetical protein Mjls_0904 [Mycobacterium sp. JLS]
 gi|126233313|gb|ABN96713.1| protein of unknown function DUF88 [Mycobacterium sp. JLS]
          Length = 311

 Score = 78.5 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 53/189 (28%), Gaps = 43/189 (22%)

Query: 7   KIALFIDGANLYASS-----------------------KALGFDIDYRKLLKAFRSRAIV 43
           ++A+++D  N+  S                        K     +D   ++    S   +
Sbjct: 14  RVAVYLDFDNIVISRYDQVHGRSSYQKDKTKDPDDFADKLQRATVDIGAVIDFASSFGTL 73

Query: 44  IRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELA 103
           +    Y     D    +              F                   K+  D+ LA
Sbjct: 74  VLTRAYADWSSDVNANYRGQLVARAVDLVQLF-------------PAAAYGKNGADIRLA 120

Query: 104 VDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160
           VDA E       L H+VI  GD  +  L    +R  + V  +         +S  L    
Sbjct: 121 VDAVEDMFRLPDLTHVVIVGGDSDYIALAQRCKRLGRYVVGI----GVAGASSRSLAAAC 176

Query: 161 DYFMDLAYL 169
           D F+    L
Sbjct: 177 DEFVTYDAL 185


>gi|120402029|ref|YP_951858.1| hypothetical protein Mvan_1014 [Mycobacterium vanbaalenii PYR-1]
 gi|119954847|gb|ABM11852.1| protein of unknown function DUF88 [Mycobacterium vanbaalenii PYR-1]
          Length = 299

 Score = 78.5 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 58/204 (28%), Gaps = 45/204 (22%)

Query: 7   KIALFIDGANLY-----------------------ASSKALGFDIDYRKLLKAFRSRAIV 43
           ++A+++D  N+                         + +     +D   ++    S   +
Sbjct: 8   RVAVYLDFDNIVISRYDQVNGRNSFQRDKAKGPDDWAERVARATVDVGAIIDFASSFGTL 67

Query: 44  IRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELA 103
           +    Y     +    +              F                   K+  D+ LA
Sbjct: 68  VLTRAYADWSVEINAGYRGQLVQRAVDLVQLF-------------PAAAYGKNGADIRLA 114

Query: 104 VDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160
           VDA E       L H+VI  GD  +  L    +R  + V  +         +S  L    
Sbjct: 115 VDAVEDMFRLPDLTHVVIVGGDSDYIALAQRCKRLGRYVVGI----GVAGSSSRMLAAAC 170

Query: 161 DYFMDLAYL--KNEIARDPDEDKK 182
           D F+    L     +   P  D+K
Sbjct: 171 DEFVTYDALPGIPVMEPPPVADEK 194


>gi|322436968|ref|YP_004219180.1| hypothetical protein AciX9_3394 [Acidobacterium sp. MP5ACTX9]
 gi|321164695|gb|ADW70400.1| hypothetical protein AciX9_3394 [Acidobacterium sp. MP5ACTX9]
          Length = 275

 Score = 78.5 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 64/183 (34%), Gaps = 32/183 (17%)

Query: 5   REKIALFIDGANLY---------ASSKALGFDIDYRKLLKAFRS-------RAIVIRAYY 48
            ++ A+F+D   LY         A++      +D  +L+   +S        A ++R Y+
Sbjct: 1   MQRNAVFVDAGYLYSQSAVSLTGANAARPSLRLDEAELINQLKSLALNLSAGAQLLRIYW 60

Query: 49  YTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE 108
           Y         +   L  + D              K    +      +  +D  L  D  +
Sbjct: 61  YDGAKNGMTAEQLVLADMAD-------------VKVRLGSINSAGQQKGVDSLLVTDLID 107

Query: 109 QSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
            +    +   VI +GDG     V   Q    +V +V    S  +  S  LR++AD   ++
Sbjct: 108 LARNQAISDAVIVTGDGDMRVAVQIAQSFGVRVHLVGLEPSS-ASQSQLLRQEADTVHEI 166

Query: 167 AYL 169
             +
Sbjct: 167 PKI 169


>gi|315637785|ref|ZP_07892977.1| conserved hypothetical protein [Campylobacter upsaliensis JV21]
 gi|315482128|gb|EFU72740.1| conserved hypothetical protein [Campylobacter upsaliensis JV21]
          Length = 220

 Score = 78.5 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 28/174 (16%), Positives = 51/174 (29%), Gaps = 32/174 (18%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRK-LLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            + +A+FID  N+            Y K +     S   +I    Y          +   
Sbjct: 3   NKSVAIFIDAENI---------SFKYAKDIFNIASSYGELIIKRIYADWRSPALSGWKDE 53

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSG 121
                 +    F+                  K+S D+ L  DA      + +E  +I S 
Sbjct: 54  IAEHSIIAIQNFKF---------------NRKNSSDMHLMADAMSIFYEKDVEIFIIVSS 98

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
           D  +  L   L+   K+V  +    ++ S            F  L   + +  +
Sbjct: 99  DSDYIPLTQKLRESKKQVIGMGENKANKSY-----INAFSAFHYLDKKEEKSDK 147


>gi|121596271|ref|YP_988167.1| hypothetical protein Ajs_3985 [Acidovorax sp. JS42]
 gi|120608351|gb|ABM44091.1| protein of unknown function DUF88 [Acidovorax sp. JS42]
          Length = 179

 Score = 78.5 bits (192), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 24/158 (15%), Positives = 55/158 (34%), Gaps = 23/158 (14%)

Query: 23  ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVA 82
              + ID+ KL +       +++                    L      NGF+V+    
Sbjct: 40  DYNWKIDFGKLFQFAGGDRNLVKKAGLFGSRPPKNDS------LWTAAEKNGFEVI---- 89

Query: 83  KEFTENCGRKRVKSSMDVELAVDAFEQSEGL-----EHLVIFSGDGCFTTLVAALQRKVK 137
                +      +  +D ++     E S  +     + + + SGD  +   +  L+++  
Sbjct: 90  ---VYDRNIAGHEKKIDTDIVATMIEDSYEILTIGQDEITLVSGDSDYVPAIEKLKKRGI 146

Query: 138 KVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
            V +V         A+ +L+  A  F++L    + +A+
Sbjct: 147 PVHVV-----FWGHAARELKEVATKFVNLDPYLDHLAK 179


>gi|269128328|ref|YP_003301698.1| hypothetical protein Tcur_4132 [Thermomonospora curvata DSM 43183]
 gi|268313286|gb|ACY99660.1| protein of unknown function DUF88 [Thermomonospora curvata DSM
           43183]
          Length = 333

 Score = 78.1 bits (191), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 63/190 (33%), Gaps = 30/190 (15%)

Query: 7   KIALFIDGANLYASSKAL--------GFDIDYRKLLKAFRS------RAIVIRAYYYTTV 52
           + A+F+D   LYA+S AL         + +   +L+ A         R  ++R Y++   
Sbjct: 12  RYAVFVDAGYLYAASGALLLDATSRREYRVAAEQLINALIDYAAKELRGELLRVYWFDAA 71

Query: 53  VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG 112
                     +   L               K    N   +  +  +D +L  D    +  
Sbjct: 72  PRRQPTVDQRVIANLP------------RVKLRLGNLNAQGQQKGVDAQLRADLEALARH 119

Query: 113 --LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAY 168
             +   V+ +GD      V A QR    V +     +  S  ++ L  ++D    +   +
Sbjct: 120 RAITDAVLLAGDEDMLPAVEAAQRYGVLVHLWGVEPTHGSNQAEWLVWESDTVEVLSADF 179

Query: 169 LKNEIARDPD 178
           L+    +   
Sbjct: 180 LRPYFTKAKA 189


>gi|15639879|ref|NP_219329.1| hypothetical protein TP0894 [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189026117|ref|YP_001933889.1| hypothetical protein TPASS_0894 [Treponema pallidum subsp. pallidum
           SS14]
 gi|3323212|gb|AAC65851.1| conserved hypothetical protein [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189018692|gb|ACD71310.1| hypothetical protein TPASS_0894 [Treponema pallidum subsp. pallidum
           SS14]
 gi|291060253|gb|ADD72988.1| conserved hypothetical protein [Treponema pallidum subsp. pallidum
           str. Chicago]
          Length = 340

 Score = 78.1 bits (191), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 22/171 (12%), Positives = 50/171 (29%), Gaps = 32/171 (18%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
            +K AL IDG N+               ++        +     Y          +  L 
Sbjct: 2   EKKFALLIDGDNI--------SPKFLEGIVGEVSKEGDIHVRRVYGDWTTPNMNGWKGLL 53

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG---LEHLVIFSG 121
                      ++  +  ++F          ++ D  + ++A E +     +  + I S 
Sbjct: 54  T----------KIPIRPVQQFRYG------DNATDNTIIMEAIELANNNRAINAVCIAST 97

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
           D  + +L   L+     V  +    +     S       + F  +  ++ E
Sbjct: 98  DSDYYSLALKLREYGLYVLGIGKRNAREIWVS-----ACNEFKYIENIETE 143


>gi|116672106|ref|YP_833039.1| hypothetical protein Arth_3564 [Arthrobacter sp. FB24]
 gi|116612215|gb|ABK04939.1| hypothetical protein Arth_3564 [Arthrobacter sp. FB24]
          Length = 415

 Score = 78.1 bits (191), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 63/170 (37%), Gaps = 27/170 (15%)

Query: 7   KIALFIDGANLYASSKAL------GFDIDYRKLLKAFRSRA--IVIRAYYYTTVVGDPEQ 58
           + A+F+D  N+Y    AL       F  D +    A  +       R +    ++ +   
Sbjct: 14  RAAMFVDFDNVYTGLLALDPLAAKRFAEDPKHWADALSAGGSAESSRRF----LIRNCYL 69

Query: 59  QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEH 115
                     +    GF+V+             +R KSS D+ L +DA +    S G++ 
Sbjct: 70  NPVVYSKYRTYWTRAGFRVIDCP-------SLTQRGKSSTDINLVLDAMDALSGSAGIDE 122

Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165
             I S D  FT+L+   +   K  T+++         +   R  AD  ++
Sbjct: 123 FFIASADADFTSLIQRFRAADKMTTVIA-----AGAVAFAYREMADSVVE 167


>gi|108797873|ref|YP_638070.1| hypothetical protein Mmcs_0898 [Mycobacterium sp. MCS]
 gi|119866967|ref|YP_936919.1| hypothetical protein Mkms_0915 [Mycobacterium sp. KMS]
 gi|108768292|gb|ABG07014.1| protein of unknown function DUF88 [Mycobacterium sp. MCS]
 gi|119693056|gb|ABL90129.1| protein of unknown function DUF88 [Mycobacterium sp. KMS]
          Length = 311

 Score = 78.1 bits (191), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 53/189 (28%), Gaps = 43/189 (22%)

Query: 7   KIALFIDGANLYASS-----------------------KALGFDIDYRKLLKAFRSRAIV 43
           ++A+++D  N+  S                        K     +D   ++    S   +
Sbjct: 14  RVAVYLDFDNIVISRYDQVHGRSSYQKDKTKDPDDFADKLQRATVDIGAVIDFASSFGTL 73

Query: 44  IRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELA 103
           +    Y     D    +              F                   K+  D+ LA
Sbjct: 74  VLTRAYADWSSDVNANYRGQLVARAVDLVQLF-------------PAAAYGKNGADIRLA 120

Query: 104 VDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160
           VDA E       L H+VI  GD  +  L    +R  + V  +         +S  L    
Sbjct: 121 VDAVEDMFRLPDLTHVVIVGGDSDYIALAQRCKRLGRYVVGI----GVAGASSRSLAAAC 176

Query: 161 DYFMDLAYL 169
           D F+    L
Sbjct: 177 DEFVTYDAL 185


>gi|85859964|ref|YP_462166.1| putative cytoplasmic protein [Syntrophus aciditrophicus SB]
 gi|85723055|gb|ABC77998.1| hypothetical cytosolic protein [Syntrophus aciditrophicus SB]
          Length = 196

 Score = 78.1 bits (191), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 40/177 (22%), Positives = 76/177 (42%), Gaps = 28/177 (15%)

Query: 7   KIALFIDGANLYASSKA------LGFDIDYRK---LLKAFRS-----RAIVIRAYYYTTV 52
           +  +F+DG NL    KA          +D+ +   +   F +        VIR YYYT V
Sbjct: 16  RAMVFVDGENLAIRYKAGLADAPPEKHVDFLQDVYVWSHFANIPYHVHCDVIRKYYYTAV 75

Query: 53  VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG 112
            GD  +        ++ +      +  +  + F +  GR      +D+ +A +    +  
Sbjct: 76  QGDDPK--------IEDVETQLKNIGIEAPRVFKKKKGRPT--KRVDITIATEMLTHAHR 125

Query: 113 --LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
              +  ++ +GD  +  LV A+Q + ++V ++     DP + S +L   ADYF D++
Sbjct: 126 GNYDIAILVAGDEDYVPLVKAVQDEGRRV-VLWFFEGDPGL-SKKLEMAADYFFDIS 180


>gi|312141909|ref|YP_004009245.1| hypothetical protein REQ_46160 [Rhodococcus equi 103S]
 gi|311891248|emb|CBH50567.1| conserved hypothetical protein [Rhodococcus equi 103S]
          Length = 339

 Score = 78.1 bits (191), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 53/171 (30%), Gaps = 30/171 (17%)

Query: 10  LFIDGANLYASS--------KALGFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGD 55
           L+ID   L AS+           G  +DY KL+ +    A       V+R ++Y +    
Sbjct: 18  LYIDAGYLLASAATRVTGTSLRGGIHVDYAKLVSSLVDAAQARSGLPVLRVHWYDSARNG 77

Query: 56  PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--L 113
                             G        K      G    +  +D+ + +D    +     
Sbjct: 78  VPDPQQ---------ERIG---ELSKVKLRLGRFGVNGEQKGVDLRIGLDLVAHARNGAS 125

Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVST--VLSDPSMASDQLRRQADY 162
           +   + SGD   T  V   Q    +V + +       P   S  L R AD 
Sbjct: 126 DVFFLVSGDDDLTEAVDEAQVHGVQVVVFAVPSAEGKPHGVSRHLVRAADE 176


>gi|225020005|ref|ZP_03709197.1| hypothetical protein CORMATOL_00001 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224947140|gb|EEG28349.1| hypothetical protein CORMATOL_00001 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 404

 Score = 78.1 bits (191), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 68/181 (37%), Gaps = 27/181 (14%)

Query: 6   EKIALFIDGANL---YASSKALGF----DIDYRKLLKAF------RSRAIVIRAYYYTTV 52
           E+  +F+D + L   + +S  +G     +ID   +++        +    V R ++Y  +
Sbjct: 3   ERTQIFVDTSYLLASFYNSWEIGARAQLEIDLPAVVRTLGTMVTEQFEQPVHRQFWYDGI 62

Query: 53  VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS-- 110
                 ++       D     G Q+ A    E+    G +R + ++D  L  D    S  
Sbjct: 63  PDTGPHRYQRALRTCD-----GVQLRAGQLIEW----GERRTQKAVDTRLVADMVLTSVR 113

Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
           + +  +V+ SGD      V        +V +        SM+S  LR   D  + L   +
Sbjct: 114 QEVTDIVLVSGDADMIPGVQEAVNHGIRVHLYGF--GWDSMSS-ALRHACDSLVILDPRE 170

Query: 171 N 171
           +
Sbjct: 171 D 171


>gi|134045586|ref|YP_001097072.1| hypothetical protein MmarC5_0543 [Methanococcus maripaludis C5]
 gi|132663211|gb|ABO34857.1| protein of unknown function DUF88 [Methanococcus maripaludis C5]
          Length = 193

 Score = 78.1 bits (191), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 33/176 (18%), Positives = 61/176 (34%), Gaps = 36/176 (20%)

Query: 9   ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68
           AL IDG N+        F++D  K+  A      ++    Y                L++
Sbjct: 2   ALLIDGPNM----LRKEFNVDLDKVRDALEQFGDIVVGRVYLN--------QYASDKLIE 49

Query: 69  WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFT 126
            +   GF+                     +DVE+AVD  E    + L+ LV  + D  F 
Sbjct: 50  AIANQGFEPRI--------------SAGDVDVEMAVDGTELIFNKNLDTLVYMTRDADFL 95

Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM----DLAYLKNEIARDPD 178
             +   + + K++ +V          S  ++  AD+ +    D    K ++ +   
Sbjct: 96  PAIRKAKERGKQIIVVGAEPGF----STAIQNIADHVIRVEEDFELDKEKLEQKKR 147


>gi|220936103|ref|YP_002515002.1| hypothetical protein Tgr7_2943 [Thioalkalivibrio sp. HL-EbGR7]
 gi|219997413|gb|ACL74015.1| conserved hypothetical protein [Thioalkalivibrio sp. HL-EbGR7]
          Length = 212

 Score = 78.1 bits (191), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 38/182 (20%), Positives = 63/182 (34%), Gaps = 21/182 (11%)

Query: 1   MFDPREKIALFIDGANLYASSKA--LGFDIDYRKL-LKAFRSRAIVIRAYYYTTVVGDPE 57
           M   + +  ++IDG N Y  S        +D   L ++    R  ++R  Y+T  V    
Sbjct: 1   MSSSQLRTIVYIDGFNFYYGSLKGTDYKWLDLEALFVRVLGERNNLVRIKYFTAKVQPTA 60

Query: 58  QQFSPLHPLLDWLHYN-----------GFQVVAKVAKEFTENCGR-----KRVKSSMDVE 101
           Q          +L              G  +  +V+ E      R     K  +   DV 
Sbjct: 61  QDPDVSIRQATYLRAIQKHSPKVEVYYGHFLRHRVSMENANPPPRLVHVWKNEEKGSDVN 120

Query: 102 LAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQ 159
           LA+     +  +  +  VI S D      +  ++    KV  + T  +     S QL+R 
Sbjct: 121 LALHVLNDAWQDAYDCAVIVSNDSDLAESLRLVKTHHDKVIGLVTPGAPKRKTSAQLKRY 180

Query: 160 AD 161
           AD
Sbjct: 181 AD 182


>gi|162447870|ref|YP_001621002.1| hypothetical protein ACL_1016 [Acholeplasma laidlawii PG-8A]
 gi|161985977|gb|ABX81626.1| conserved hypothetical protein [Acholeplasma laidlawii PG-8A]
          Length = 242

 Score = 78.1 bits (191), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 25/177 (14%), Positives = 54/177 (30%), Gaps = 30/177 (16%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           IAL ID  N+          I    ++        +  A  Y     +  + +       
Sbjct: 9   IALLIDADNI--------SPIYLDIIINEANKHGKITNARVYGDWSQERLKTW------- 53

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCF 125
                   +      +++     +    ++ D  L +DA +   S  +    I S D  F
Sbjct: 54  ---RSKAEKFSLTFVQQYANLSNKG---NATDFTLVIDAMDLLYSNKVNAFCIVSSDSDF 107

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182
           T L+  L+     +  +           + L    + F  +  +   +   P +++K
Sbjct: 108 TKLIIRLKEDNMYLIGMGESK-----TPEVLVNSYERFYYIDQILEALE--PKKERK 157


>gi|212705003|ref|ZP_03313131.1| hypothetical protein DESPIG_03071 [Desulfovibrio piger ATCC 29098]
 gi|212671555|gb|EEB32038.1| hypothetical protein DESPIG_03071 [Desulfovibrio piger ATCC 29098]
          Length = 229

 Score = 77.8 bits (190), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 55/162 (33%), Gaps = 25/162 (15%)

Query: 9   ALFIDGANLYA--------SSKALG----FDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP 56
           AL++D  N+Y         +++A G      + + +           +R      +    
Sbjct: 13  ALYVDFDNIYTRFLEADPEAARAFGMAPYRWVRWIENHALRILYGDGVRRR---ILKRMC 69

Query: 57  EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE---QSEGL 113
                           + FQVV              R K+S D+ L +D  +        
Sbjct: 70  YLNPQRYQEFRYHFIRSAFQVVDCP-------PLTTRGKTSTDIHLVMDCMDDLSHPTHF 122

Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQ 155
           +  +I SGD  FT L+  LQ   ++  I+S   S P+  +  
Sbjct: 123 DEFIILSGDADFTPLLIRLQEHARRTLILSVGYSSPAYTAAA 164


>gi|294495820|ref|YP_003542313.1| hypothetical protein Mmah_1163 [Methanohalophilus mahii DSM 5219]
 gi|292666819|gb|ADE36668.1| protein of unknown function DUF88 [Methanohalophilus mahii DSM
           5219]
          Length = 169

 Score = 77.8 bits (190), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 56/165 (33%), Gaps = 32/165 (19%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
           R  I L +DG N+        FD++  ++    +    V     +              +
Sbjct: 23  RRSIGLLVDGPNV----LRKEFDVNLEEIRDVLKEYGNVKIGRVFLN--------QYASN 70

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGD 122
            L++ +  NGF+ V                 S +DV LAV+  +      ++ L + + D
Sbjct: 71  KLVEAVENNGFEPVIC--------------SSDVDVRLAVEGMDLVHNPNIDTLALVTRD 116

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
             F  L+       K+  I           S  LR  +DY + L 
Sbjct: 117 ADFKPLLNKANEHGKETIIFGVEPGF----STALRNSSDYVVILN 157


>gi|330503755|ref|YP_004380624.1| hypothetical protein MDS_2841 [Pseudomonas mendocina NK-01]
 gi|328918041|gb|AEB58872.1| hypothetical protein MDS_2841 [Pseudomonas mendocina NK-01]
          Length = 239

 Score = 77.8 bits (190), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 39/131 (29%), Gaps = 22/131 (16%)

Query: 37  FRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKS 96
                 V+    Y                L +       ++      +     G    K+
Sbjct: 2   VAQFGHVVLRRGYGN-----------HGTLANKWQEAAVRLAFTPCLQCQYAAG----KN 46

Query: 97  SMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASD 154
           + D+ LA+DA E       +   + + D  F  L   L+ +   V IV           D
Sbjct: 47  TSDIALALDAMEALFDHRADTFCLVTSDSDFAYLCRKLRERGATVCIVGE-----PKTPD 101

Query: 155 QLRRQADYFMD 165
            LR  +D F +
Sbjct: 102 ALRNASDQFFE 112


>gi|305681687|ref|ZP_07404493.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC
           14266]
 gi|305658847|gb|EFM48348.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC
           14266]
          Length = 406

 Score = 77.8 bits (190), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 68/181 (37%), Gaps = 27/181 (14%)

Query: 6   EKIALFIDGANL---YASSKALGF----DIDYRKLLKAF------RSRAIVIRAYYYTTV 52
           E+  +F+D + L   + +S  +G     +ID   +++        +    V R ++Y  +
Sbjct: 3   ERTQIFVDTSYLLASFYNSWEIGARAQLEIDLPAVVRTLGTMVTEQFEQPVHRQFWYDGI 62

Query: 53  VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS-- 110
                 ++       D     G Q+ A    E+    G +R + ++D  L  D    S  
Sbjct: 63  PDTGPHRYQRALRTCD-----GVQLRAGQLIEW----GERRTQKAVDTRLVADMVLTSVR 113

Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
           + +  +V+ SGD      V        +V +        SM+S  LR   D  + L   +
Sbjct: 114 QEVTDIVLVSGDADMIPGVQEAVNHGIRVHLYGF--GWDSMSS-ALRHACDSLVILDPRE 170

Query: 171 N 171
           +
Sbjct: 171 D 171


>gi|56964892|ref|YP_176623.1| hypothetical protein ABC3128 [Bacillus clausii KSM-K16]
 gi|56911135|dbj|BAD65662.1| hypothetical protein [Bacillus clausii KSM-K16]
          Length = 280

 Score = 77.8 bits (190), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 65/184 (35%), Gaps = 24/184 (13%)

Query: 1   MFDPRE--KIALFIDGANLYASS-KALGFDIDYRK----LLKAFRSRAIVIRAYYYTTVV 53
           MF  ++   +A+FID  N+Y +       + ++ +    L      R    +   +    
Sbjct: 12  MFKTKDHNNVAIFIDYDNVYWTLMNRYNHNPNHEEQEKNLFNCLWDRYGQNQVRTFRAYA 71

Query: 54  GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--- 110
                 F  +   L  L     Q+       ++ +      K+S D+EL +DA E +   
Sbjct: 72  -----DFQRIRSSLTDLQKQRVQIRH----VYSNDKEGDSRKNSSDIELCIDAIESTYKD 122

Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
           E +   V  + D     +++ L  K K+V +     + P           +Y      L+
Sbjct: 123 ENISCYVFVTADSDMVPIMSRLMYKGKRVELYYLSEAAPKHT-----DITNYSHYSEDLR 177

Query: 171 NEIA 174
           + + 
Sbjct: 178 DFLQ 181


>gi|300780231|ref|ZP_07090087.1| conserved hypothetical protein [Corynebacterium genitalium ATCC
           33030]
 gi|300534341|gb|EFK55400.1| conserved hypothetical protein [Corynebacterium genitalium ATCC
           33030]
          Length = 402

 Score = 77.8 bits (190), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 61/184 (33%), Gaps = 27/184 (14%)

Query: 6   EKIALFIDGANL---YASSKALGF----DIDYRKLLKAFRS------RAIVIRAYYYTTV 52
           E+  +F+D + L   + +S   G     +ID  +++    +         + R ++Y  +
Sbjct: 3   ERTVVFVDTSYLLASFYNSWETGARSQLEIDLPEVVANLGTMITQQLHQPIHRQFWYDGI 62

Query: 53  VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS-- 110
                 ++       D     G Q+      E+    G +R +  +D  L  D    +  
Sbjct: 63  PDSGPHRYQRALRTCD-----GVQLRTGQLIEW----GERRTQKGVDTRLVADIVANAMR 113

Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
                 V+ SGD      V        ++ +        SM+S  LR   D    L   +
Sbjct: 114 GQYSDFVLVSGDADMIPGVEEATNAGVRMHLYGF--GWDSMSS-ALRHACDSTTILDPRE 170

Query: 171 NEIA 174
           +   
Sbjct: 171 DFAE 174


>gi|330987024|gb|EGH85127.1| hypothetical protein PLA107_18497 [Pseudomonas syringae pv.
           lachrymans str. M301315]
          Length = 206

 Score = 77.8 bits (190), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 67/193 (34%), Gaps = 23/193 (11%)

Query: 5   REKIALFIDGANLYASSKALGFD----IDYRKLLKAFRSRAIVIRAYYYTTVV----GDP 56
            +++  ++DG NL    K   F     +D   L  A       + A +Y T      G  
Sbjct: 1   MQRVITYVDGFNLSFGLKDSRFKKYYWLDLPALSAALFKPGQQLVATHYFTARIRTNGRN 60

Query: 57  EQQFSPLHPLLDWLHYNG----FQVVAKVAKEFTENCGRKRV---KSSMDVELAVDAFEQ 109
                     +D L         +       +    CG       +   DV +A      
Sbjct: 61  AADAKRQTSYIDALTAQDNLTVHEGHYLEKTQRCNGCGATWKAYEEKMTDVNIAAQMLAD 120

Query: 110 S--EGLEHLVIFSGDGCFTTLVAALQRK--VKKVTIVSTVLSDPSMASDQLRRQADYFMD 165
           +  +  +   I SGD   TT +  ++ +   K++ +V      P+  S QL++ A+ F+ 
Sbjct: 121 AYEDRFDTAFIISGDSDLTTPIQQVRNRFPNKRLIVV----FPPNRQSAQLKKAANGFLS 176

Query: 166 LAYLKNEIARDPD 178
           +   K    + PD
Sbjct: 177 IGEDKLRQNQLPD 189


>gi|325672821|ref|ZP_08152515.1| hypothetical protein HMPREF0724_10296 [Rhodococcus equi ATCC 33707]
 gi|325556074|gb|EGD25742.1| hypothetical protein HMPREF0724_10296 [Rhodococcus equi ATCC 33707]
          Length = 328

 Score = 77.8 bits (190), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 53/171 (30%), Gaps = 30/171 (17%)

Query: 10  LFIDGANLYASS--------KALGFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGD 55
           L+ID   L AS+           G  +DY KL+ +    A       V+R ++Y +    
Sbjct: 7   LYIDAGYLLASAATRVTGTSLRGGIHVDYAKLVSSLVDAAQARSGLPVLRVHWYDSARNG 66

Query: 56  PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--L 113
                             G        K      G    +  +D+ + +D    +     
Sbjct: 67  VPDPQQ---------ERIG---ELSKVKLRLGRFGVNGEQKGVDLRIGLDLVAHARNGAS 114

Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVST--VLSDPSMASDQLRRQADY 162
           +   + SGD   T  V   Q    +V + +       P   S  L R AD 
Sbjct: 115 DVFFLVSGDDDLTEAVDEAQVHGVQVVVFAVPSAEGKPHGVSRHLVRAADE 165


>gi|315445391|ref|YP_004078270.1| hypothetical protein Mspyr1_38410 [Mycobacterium sp. Spyr1]
 gi|315263694|gb|ADU00436.1| uncharacterized conserved protein [Mycobacterium sp. Spyr1]
          Length = 302

 Score = 77.8 bits (190), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 64/204 (31%), Gaps = 45/204 (22%)

Query: 7   KIALFIDGANLYASS-------------KALGFD----------IDYRKLLKAFRSRAIV 43
           ++A+++D  N+  S              KA GFD          +D   ++    S   +
Sbjct: 8   RVAVYLDFDNIVLSRYDQVNGRNSFQRDKAKGFDEVRDKLDRATVDVGAIIDFASSFGTL 67

Query: 44  IRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELA 103
           +    Y     +   ++              F                   K+  D+ LA
Sbjct: 68  VLTRAYADWSAEINARYRGQLVGRAVDLVQLF-------------PAAAYGKNGADIRLA 114

Query: 104 VDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160
           VDA E       L H+VI +GD  +  L    +R  + V  +         +S  L    
Sbjct: 115 VDAVEDMFRLPDLTHVVIVAGDSDYIALAQRCKRLGRYVVGI----GVAGSSSRMLAAAC 170

Query: 161 DYFMDLAYL--KNEIARDPDEDKK 182
           D F+    L        +P  D+K
Sbjct: 171 DEFVTYDTLPGVPVFEPEPVADEK 194


>gi|220919728|ref|YP_002495031.1| hypothetical protein Mnod_8422 [Methylobacterium nodulans ORS 2060]
 gi|219952148|gb|ACL62539.1| conserved hypothetical protein [Methylobacterium nodulans ORS 2060]
          Length = 204

 Score = 77.8 bits (190), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 53/166 (31%), Gaps = 13/166 (7%)

Query: 5   REKIALFIDGANLYASSKALGF----DIDYRKLLKAFRSRAI-VIRAYYYTTVVGDPEQQ 59
             ++  ++DG NLY +   L       +D  +L ++       +I   ++T         
Sbjct: 1   MRRVIAYVDGFNLYHAIDDLQKPHLKWLDLWQLAQSICGTGETLIEVNFFTAYPTWKPGP 60

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAK------EFTENCGRKRVKSSMDVELAVDAFEQS--E 111
                  +  L + G   V    K      +     G    +   DV +AV     +  +
Sbjct: 61  MKRHQVYVKALRHAGVNCVIGHFKTKQRECKRCGAQGDVHEEKETDVAIAVQITTDAFLD 120

Query: 112 GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLR 157
           G +  +I S D      +  +++   +  +           +  L+
Sbjct: 121 GYDRALIISADSDLAPALRTVRQHFPRKALNVIAPPGRKGHARDLQ 166


>gi|147920799|ref|YP_685395.1| hypothetical protein RCIX674 [uncultured methanogenic archaeon
           RC-I]
 gi|110620791|emb|CAJ36069.1| conserved hypothetical protein [uncultured methanogenic archaeon
           RC-I]
          Length = 190

 Score = 77.4 bits (189), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 55/162 (33%), Gaps = 32/162 (19%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
           R+ IAL +DG N+        F ID   +    +    +     +               
Sbjct: 32  RKGIALLVDGPNM----LRKEFQIDLEVVRDILKRYGDIKVGKVFLN--------QYASD 79

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGD 122
            L++ +   GF+ +                   +DV LAVDA E    + ++ + I + D
Sbjct: 80  KLVEAIENQGFEPIV--------------GSGDVDVRLAVDAMELVFNQHIDTIAIVTRD 125

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
             F  +++      K+  +           S  L+  ADY +
Sbjct: 126 ADFKPVLSKASMYGKETIVFGAEPGL----SIALKNVADYVI 163


>gi|271962863|ref|YP_003337059.1| hypothetical protein Sros_1318 [Streptosporangium roseum DSM 43021]
 gi|270506038|gb|ACZ84316.1| hypothetical protein Sros_1318 [Streptosporangium roseum DSM 43021]
          Length = 313

 Score = 77.4 bits (189), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 64/187 (34%), Gaps = 30/187 (16%)

Query: 7   KIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSR------AIVIRAYYYTTV 52
           K A+ +D   LYA++            + +   +L++A +          ++R Y+Y   
Sbjct: 14  KYAVLVDVGYLYAAAGEVLLGAKERKEYRVSADELIQALQKHAETRIHGELLRIYWYDAA 73

Query: 53  VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG 112
                     +   L W             K    N   +  +  +D ++  D    +  
Sbjct: 74  RDRVPTVDQRVIAQLPW------------VKVRLGNLNARGQQKGVDAQIRSDLEALARH 121

Query: 113 --LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAY 168
             +   ++ +GD      V A Q    ++ +        +  +++L  ++D    +   +
Sbjct: 122 HAVSDTILLAGDEDMVPAVEAAQAYGVRIHLWGVEPPYGTNQAERLVWESDTVEIISADF 181

Query: 169 LKNEIAR 175
           L++  +R
Sbjct: 182 LRSYFSR 188


>gi|291276906|ref|YP_003516678.1| hypothetical protein HMU06860 [Helicobacter mustelae 12198]
 gi|290964100|emb|CBG39944.1| Putative hypothetical protein [Helicobacter mustelae 12198]
          Length = 233

 Score = 77.4 bits (189), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 53/148 (35%), Gaps = 17/148 (11%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            D   KIALF+D  N+     A  +    R++ +   S   V     Y     D    ++
Sbjct: 1   MDKERKIALFLDCENV-----AAKWA---REIFERLESIGDVCIKKAYGDWRNDALNPWN 52

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIF 119
               L+ +       +     K       +   K+S D+++++D         ++ +VI 
Sbjct: 53  A--ELIQYAIEPIHIITGNHYK-----NNQGSGKNSCDIKISIDIMNCLYDKIVDCIVIV 105

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLS 147
           S D  F  L   ++ K  +V       +
Sbjct: 106 SSDSDFAPLAQEIRSKGLQVIGFGENKA 133


>gi|327480971|gb|AEA84281.1| conserved hypothetical protein [Pseudomonas stutzeri DSM 4166]
          Length = 220

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 20/98 (20%), Positives = 35/98 (35%), Gaps = 11/98 (11%)

Query: 70  LHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTT 127
                 ++      ++    G    K++ D+ LA+DA E       +   + + D  F  
Sbjct: 5   WQEALVRLAFTPCLQYQYAAG----KNTSDIALALDAMEALFDHRADTFCLVTSDSDFAY 60

Query: 128 LVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165
           L   L+ +   V IV           D LR  +D F +
Sbjct: 61  LCRKLRERGATVCIVGE-----PKTPDALRNASDQFFE 93


>gi|256829512|ref|YP_003158240.1| hypothetical protein Dbac_1733 [Desulfomicrobium baculatum DSM
           4028]
 gi|256578688|gb|ACU89824.1| protein of unknown function DUF88 [Desulfomicrobium baculatum DSM
           4028]
          Length = 209

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 65/192 (33%), Gaps = 34/192 (17%)

Query: 11  FIDGANLY---ASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
            ID   L+    S ++ G++  Y +L        ++ RAYY  +    P       H  L
Sbjct: 9   LIDAGYLFNARHSVRS-GYEFSYLRLRNYLEQDGLIWRAYYLNSTPNPPSDGQDNFHRWL 67

Query: 68  DWLHYNGFQVVAKVA---KEFTE-----------------------NCGRKRVKSSMDVE 101
                 G +++ K     ++  +                       +     ++  +DV 
Sbjct: 68  RSGPPFGPKIITKFYTLKQQRADKAYCEECGQKVSLRCQNQHGDFTHRVFNEIQKGVDVA 127

Query: 102 LAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
           +A  +       E L++ SGD      V  L  + K + +V          S +L+ +AD
Sbjct: 128 IATLSLIHQRNYETLMLSSGDSDLLDAVEHLSEQGKSIELVVFRDGV----SSELQCRAD 183

Query: 162 YFMDLAYLKNEI 173
               +    +E+
Sbjct: 184 RIYWINDFASEV 195


>gi|288926820|ref|ZP_06420728.1| conserved hypothetical protein [Prevotella buccae D17]
 gi|288336392|gb|EFC74770.1| conserved hypothetical protein [Prevotella buccae D17]
          Length = 226

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 48/157 (30%), Gaps = 29/157 (18%)

Query: 9   ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68
           A+ IDG N+  ++  LG       ++    S    I    Y        +++        
Sbjct: 2   AILIDGDNV--AADKLG------DIISFVSSYGNPIIRRIYADWTKSAMKRWK------- 46

Query: 69  WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCFT 126
                 F      A  +        VK++ D+ L ++A +      ++   I S D  +T
Sbjct: 47  -EEAKTFSFRLVEALSYVG------VKNTTDMALVIEAMDLLHGKTVQGFCIVSSDSDYT 99

Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163
            L   ++ +   V                L+     F
Sbjct: 100 LLAQRIREEGLLVLGYGEQK-----TPASLQNSCHEF 131


>gi|167629267|ref|YP_001679766.1| hypothetical protein HM1_0800 [Heliobacterium modesticaldum Ice1]
 gi|167592007|gb|ABZ83755.1| hypothetical protein HM1_0800 [Heliobacterium modesticaldum Ice1]
          Length = 214

 Score = 77.0 bits (188), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 41/176 (23%), Positives = 67/176 (38%), Gaps = 16/176 (9%)

Query: 6   EKIALFIDGANLYASSKAL--GFDIDYRKLLKAFRSRAIVIRAYYYTTVV-------GDP 56
           +K A+FIDG  L    +       +DY KL K       + R YYY  +         + 
Sbjct: 21  DKCAIFIDGGYLDKVFQDEFGSPRVDYLKLSKWLSRGTSIFRTYYYNCLPYQSNPPTTEE 80

Query: 57  EQQFSPLHPLLDWLHYNG-FQVVAKVAKEFTENCGRK--RVKSSMDVELAVDAFEQS--E 111
            Q+FS        L     ++V     +            V+  +D+ L VD    +   
Sbjct: 81  SQRFSKKQAFYGRLKQLERYEVRLGKLEFRGNRQDGTPIFVQKRVDILLGVDLALLAAKN 140

Query: 112 GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
            + H  IF+GD  F   ++  + +   +T+     S+P    D L R+AD  + L 
Sbjct: 141 RITHATIFAGDSDFLPAISVAKNEGVLITLAHGGASNPPH--DDLWREADERIQLD 194


>gi|222824458|ref|YP_002576032.1| hypothetical protein Cla_1475 [Campylobacter lari RM2100]
 gi|222539679|gb|ACM64780.1| conserved hypothetical protein [Campylobacter lari RM2100]
          Length = 229

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 50/165 (30%), Gaps = 29/165 (17%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
            + +A+FID  N+   SK      D             ++    Y        Q +    
Sbjct: 3   NKSVAIFIDAENIP--SKYAKSIFDI------ASDYGEIVIKRIYGDWTQKNIQNWKEQI 54

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGD 122
                +    F  +A               K+S D+ L  +       + ++  VI S D
Sbjct: 55  AQYSIIAMQQFNFIA--------------NKNSSDMYLITEIMSFFYEKDIDIFVIVSSD 100

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
             +T+L+  L+   K+V  +    +  S            F  L 
Sbjct: 101 SDYTSLIQRLKEGKKQVIGMGLKQAVKSY-----VNSFSEFFYLD 140


>gi|283955380|ref|ZP_06372879.1| hypothetical protein C414_000450061 [Campylobacter jejuni subsp.
           jejuni 414]
 gi|283793140|gb|EFC31910.1| hypothetical protein C414_000450061 [Campylobacter jejuni subsp.
           jejuni 414]
          Length = 232

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 50/166 (30%), Gaps = 29/166 (17%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
            + IA+FID  N+   +K      D             VI    Y        Q +    
Sbjct: 3   NKSIAIFIDAENIP--AKYAKSIFDI------ASDYGEVIIKRIYGDWTQKNIQGWKEQI 54

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGD 122
                      +      ++F         K+S D+ L  +       + ++  VI S D
Sbjct: 55  A----------EYSLIAMQQF----NFAANKNSSDMYLITEIMSIFYEKNIDIFVIVSSD 100

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
             +T+L+  L+   K+V  +    S  S            F  L  
Sbjct: 101 SDYTSLIQKLRENKKQVIGMGLEKSIKSY-----VNAFSEFFYLDK 141


>gi|296268176|ref|YP_003650808.1| hypothetical protein Tbis_0183 [Thermobispora bispora DSM 43833]
 gi|296090963|gb|ADG86915.1| protein of unknown function DUF88 [Thermobispora bispora DSM 43833]
          Length = 468

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 61/188 (32%), Gaps = 31/188 (16%)

Query: 5   REKIALFIDGANLYA--------SSKALGFDIDYRKLLKAFRSRAI------VIRAYYYT 50
            ++ ALF+D   L A        + +      D   L++     +       ++R Y+Y 
Sbjct: 1   MDRCALFVDAGYLLADGARAVHGTRQREAVSWDLPGLVRFLGKLSRDRTGLPLLRCYWYE 60

Query: 51  TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110
             V                       +      +   +  R   +  MD ++  D    +
Sbjct: 61  ATVEGRRTPEHD-------------VLADIPGIKLRLSRIRPGRREGMDAQVHRDLMTLA 107

Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL-- 166
               +   V+ SGD     ++   Q    +VT+V         ++  LR++ D  +++  
Sbjct: 108 RNNAICDAVVVSGDEDLVQVICDAQDLGIRVTVVQIAGESGWSSARALRQECDDLIEVGG 167

Query: 167 AYLKNEIA 174
             L+  + 
Sbjct: 168 GQLRPYVT 175


>gi|38234817|ref|NP_940584.1| hypothetical protein DIP2281 [Corynebacterium diphtheriae NCTC
           13129]
 gi|38201081|emb|CAE50805.1| Conserved hypothetical protein [Corynebacterium diphtheriae]
          Length = 458

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 64/181 (35%), Gaps = 27/181 (14%)

Query: 6   EKIALFIDGANL---YASSKALGF----DIDYRKLLKAFRS------RAIVIRAYYYTTV 52
           E+  +F+D + L   + +S  +G     +ID  +++    +         V R ++Y  +
Sbjct: 3   ERTQVFVDTSYLLASFYNSWEIGARAQLEIDLPEVVATLGNMIHNQLGQPVHRQFWYDGI 62

Query: 53  VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS-- 110
                 ++       D     G Q+ A    E+    G +R + ++D  L  D       
Sbjct: 63  PESGPHRYQRALRTCD-----GVQLRAGQLIEW----GERRTQKAVDTRLVADMVLAGVR 113

Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
                +V+ SGD      V        +V +        SM+S  LR   D    L   +
Sbjct: 114 REFTDIVLVSGDADMIPGVQEAVNAGVRVHLYGF--GWDSMSS-ALRHACDSTTILDPRE 170

Query: 171 N 171
           +
Sbjct: 171 D 171


>gi|332158255|ref|YP_004423534.1| hypothetical protein PNA2_0614 [Pyrococcus sp. NA2]
 gi|331033718|gb|AEC51530.1| hypothetical protein PNA2_0614 [Pyrococcus sp. NA2]
          Length = 165

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 60/171 (35%), Gaps = 32/171 (18%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
           P++ I L IDG N+        F I    + KA      +  A                 
Sbjct: 22  PQKTIGLIIDGPNI----LRKEFGIKLEDIKKALERIGKIRVAKVVLNQYAP-------- 69

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSG 121
             L++ +   GF+ +               V    DV +A++A E      ++ + + + 
Sbjct: 70  QGLIEAVVNQGFEPII--------------VAGDTDVRVAIEAMELIYNANVDVIALATR 115

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
           D  F  L++  +RK K+  ++          S  L+  ADY + +     E
Sbjct: 116 DADFLPLISEAKRKGKETVVIGVEPGF----SVALQNAADYIIKMEKKAEE 162


>gi|189462157|ref|ZP_03010942.1| hypothetical protein BACCOP_02839 [Bacteroides coprocola DSM 17136]
 gi|189431130|gb|EDV00115.1| hypothetical protein BACCOP_02839 [Bacteroides coprocola DSM 17136]
          Length = 213

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 52/166 (31%), Gaps = 14/166 (8%)

Query: 2   FDPREKIALFIDGANLYASSKALG-----FDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP 56
            + ++++ ++IDG N Y   K+       + +D  KL + F      + A  Y +   D 
Sbjct: 1   MEQKQRVIVYIDGFNFYFGLKSNAKWKKYYWLDIVKLFEMFMRPNQELVAVKYFSAKPDD 60

Query: 57  EQQFSPLHPLLDWLHYNGF------QVVAKVAKEFTENC-GRKRVKSSMDVELAVDAFEQ 109
             Q    +        N        + + K    F          +   DV +A      
Sbjct: 61  IDQSLRQNAFFQANRENPKFKLILGKYLKKSITCFKCGNVIHTHEEKETDVRIATQIIAD 120

Query: 110 S--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMAS 153
           +  +  +  ++ S D      +       +KV +        S  +
Sbjct: 121 AYQKNCDISIVVSADSDMIPAIELATEACQKVFVYFPPYQYSSNLA 166


>gi|332527193|ref|ZP_08403265.1| hypothetical protein RBXJA2T_14776 [Rubrivivax benzoatilyticus JA2]
 gi|332111617|gb|EGJ11598.1| hypothetical protein RBXJA2T_14776 [Rubrivivax benzoatilyticus JA2]
          Length = 155

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 53/176 (30%), Gaps = 31/176 (17%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           + L ID  N+         ++              +     Y T                
Sbjct: 5   VMLLIDADNVSLDVMEQAVEL-------MIERHGALHVRRAYCTA--------ESALKHQ 49

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCF 125
                 G + +  +A            K+S D+ +AVDA +   +     + I S D  F
Sbjct: 50  AAFKRLGIKPMVNLA----------AGKNSTDIAMAVDAIDLVLALRPAVVAIASSDSDF 99

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
             LV  L+ K  +V  +           D+     D F  L++ +  +A  P   +
Sbjct: 100 APLVQRLREKGCRVVGL----GQDGKTGDETISVYDEFTVLSHRRGGVATTPSRGR 151


>gi|255324081|ref|ZP_05365206.1| conserved hypothetical protein [Corynebacterium tuberculostearicum
           SK141]
 gi|311740303|ref|ZP_07714134.1| conserved hypothetical protein [Corynebacterium pseudogenitalium
           ATCC 33035]
 gi|255298938|gb|EET78230.1| conserved hypothetical protein [Corynebacterium tuberculostearicum
           SK141]
 gi|311304686|gb|EFQ80758.1| conserved hypothetical protein [Corynebacterium pseudogenitalium
           ATCC 33035]
          Length = 365

 Score = 76.2 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 61/181 (33%), Gaps = 27/181 (14%)

Query: 6   EKIALFIDGANL---YASSKALGF----DIDYRKLLKAFRS------RAIVIRAYYYTTV 52
           E+  +F+D + L   + +S   G     +ID  +++              + R Y+Y  +
Sbjct: 3   ERTLVFVDTSYLLASFYNSWETGARAQLEIDLPEVVSTMGGMIENQLGTPIQRQYWYDGI 62

Query: 53  VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS-- 110
                 ++       +     G Q+      E+    G +R + ++D  L  D    +  
Sbjct: 63  PDTGPHRYQRALRTCE-----GVQLRTGQLIEW----GERRTQKAVDTRLVADMVIAAMK 113

Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
                 V+ SGD        A      +V +        SM+S  LR   D    L   +
Sbjct: 114 GQFTDFVLVSGDADMIPGAQAAVDNGIRVHLYGF--GWDSMSS-ALRHACDSTTILDPRE 170

Query: 171 N 171
           +
Sbjct: 171 D 171


>gi|298674395|ref|YP_003726145.1| hypothetical protein Metev_0431 [Methanohalobium evestigatum
           Z-7303]
 gi|298287383|gb|ADI73349.1| protein of unknown function DUF88 [Methanohalobium evestigatum
           Z-7303]
          Length = 178

 Score = 76.2 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 55/165 (33%), Gaps = 32/165 (19%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
           R  I L +DG N+        F+++   +    +    V     +               
Sbjct: 23  RRNIGLLVDGPNV----LRKEFNVNLEAIRDVLKEYGNVKIGLVFLN--------QYASE 70

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGD 122
            L++ +  NGF+ V                 S +DV LAV+  E      ++ + + + D
Sbjct: 71  KLVEAIENNGFEPVIC--------------SSDVDVRLAVEGTEMVCNPNIDTITLVTRD 116

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
             F  L+    +  K+  +           S  L+  ADY + L 
Sbjct: 117 ADFKPLLNKANKHGKETILFGVEPGF----SPALKNSADYVIMLN 157


>gi|298708071|emb|CBJ30424.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 825

 Score = 76.2 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 60/174 (34%), Gaps = 42/174 (24%)

Query: 7   KIALFIDGANLYASS------------KALGFDIDY------------RKLLKAFRSRA- 41
           K+ +FIDG  LY S                G+  +Y            R +         
Sbjct: 188 KVMVFIDGTWLYYSFFGRGERCHVSAKLGPGWVYEYNVKWEMLPVIISRAVHAQLARYGQ 247

Query: 42  -----IVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKS 96
                 V+R   +++   D ++  + +    + +    F+V                 + 
Sbjct: 248 SSRLVEVVRTVVFSSARKDTDKDSTRMRMF-NAMREKNFEVHMATTV--------GVQEK 298

Query: 97  SMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLS 147
            +D+ LAV+    +   +  +  V+ +GD  F   +A  ++K ++V + S   S
Sbjct: 299 CIDIALAVEMMHYATIPDTYDVGVLVTGDKDFMPAMARTRQKGRRVCLCSMRNS 352


>gi|148926354|ref|ZP_01810038.1| hypothetical protein Cj8486_0183c [Campylobacter jejuni subsp.
           jejuni CG8486]
 gi|145844746|gb|EDK21851.1| hypothetical protein Cj8486_0183c [Campylobacter jejuni subsp.
           jejuni CG8486]
          Length = 232

 Score = 76.2 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 50/166 (30%), Gaps = 29/166 (17%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
            + IA+FID  N+   +K      D             VI    Y        Q +    
Sbjct: 3   NKSIAIFIDAENIP--AKYAKSIFDI------ASDYGEVIIKRIYGDWTQKNIQGW---- 50

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGD 122
                      +      ++F         K+S D+ L  +       + ++  VI S D
Sbjct: 51  ------REQIAEYSLIAMQQF----NFAANKNSSDMYLITEIMSIFYEKNIDIFVIVSSD 100

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
             +T+L+  L+   K+V  +    S  S            F  L  
Sbjct: 101 SDYTSLIQKLRENKKQVIGMGLEKSIKSY-----VNAFSEFFYLDK 141


>gi|315930197|gb|EFV09312.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           305]
          Length = 223

 Score = 76.2 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 50/166 (30%), Gaps = 29/166 (17%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
            + IA+FID  N+   +K      D             VI    Y        Q +    
Sbjct: 3   NKSIAIFIDAENIP--AKYAKSIFDI------ASDYGEVIIKRIYGDWTQKNIQGW---- 50

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGD 122
                      +      ++F         K+S D+ L  +       + ++  VI S D
Sbjct: 51  ------REQIAEYSLIAMQQF----NFAANKNSSDMYLITEIMSIFYEKNIDIFVIVSSD 100

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
             +T+L+  L+   K+V  +    S  S            F  L  
Sbjct: 101 SDYTSLIQKLRENKKQVIGMGLEKSIKSY-----VNAFSEFFYLDK 141


>gi|227541425|ref|ZP_03971474.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
           ATCC 51866]
 gi|227182813|gb|EEI63785.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
           ATCC 51866]
          Length = 448

 Score = 76.2 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 60/181 (33%), Gaps = 27/181 (14%)

Query: 6   EKIALFIDGANL---YASSKALGF----DIDYRKLLKAFRS------RAIVIRAYYYTTV 52
           E+  +F+D + L   + +S   G     +ID  +++   +          + R  +Y  +
Sbjct: 3   ERTMVFVDTSYLLASFYNSWETGARAQLEIDLPEVVAQLKGMIEDQLGQPIHRQMWYDGI 62

Query: 53  VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG 112
                 ++            NG Q+      E+    G +R + ++D  L  D       
Sbjct: 63  PDSGPHRYHRALRAC-----NGVQLRVGQLIEW----GERRTQKAVDTRLVADLVLAGVH 113

Query: 113 --LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
                 V+ SGD      V        +V +        SM+S  LR   D    L   +
Sbjct: 114 QTCSDAVLVSGDADMIPGVNEATNSGVRVHLYGF--GWDSMSS-ALRHACDTTTILDPRE 170

Query: 171 N 171
           +
Sbjct: 171 D 171


>gi|227487719|ref|ZP_03918035.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
           ATCC 51867]
 gi|227092340|gb|EEI27652.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
           ATCC 51867]
          Length = 448

 Score = 76.2 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 60/181 (33%), Gaps = 27/181 (14%)

Query: 6   EKIALFIDGANL---YASSKALGF----DIDYRKLLKAFRS------RAIVIRAYYYTTV 52
           E+  +F+D + L   + +S   G     +ID  +++   +          + R  +Y  +
Sbjct: 3   ERTMVFVDTSYLLASFYNSWETGARAQLEIDLPEVVAQLKGMIEDQLGQPIHRQMWYDGI 62

Query: 53  VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG 112
                 ++            NG Q+      E+    G +R + ++D  L  D       
Sbjct: 63  PDSGPHRYHRALRAC-----NGVQLRVGQLIEW----GERRTQKAVDTRLVADLVLAGVH 113

Query: 113 --LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
                 V+ SGD      V        +V +        SM+S  LR   D    L   +
Sbjct: 114 QTCSDAVLVSGDADMIPGVNEATNSGVRVHLYGF--GWDSMSS-ALRHACDTTTILDPRE 170

Query: 171 N 171
           +
Sbjct: 171 D 171


>gi|153951620|ref|YP_001397437.1| hypothetical protein JJD26997_0199 [Campylobacter jejuni subsp.
           doylei 269.97]
 gi|152939066|gb|ABS43807.1| conserved hypothetical protein [Campylobacter jejuni subsp. doylei
           269.97]
          Length = 232

 Score = 76.2 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 50/166 (30%), Gaps = 29/166 (17%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
             + IA+FID  N+   +K      D             VI    Y        Q +   
Sbjct: 2   KNKSIAIFIDAENIP--AKYAKSIFDI------ASDYGEVIIKRIYGDWTQKNIQGW--- 50

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSG 121
                       +      ++F         K+S D+ L  +       + ++  VI S 
Sbjct: 51  -------REQIAEYSLIAMQQF----NFAANKNSSDMYLITEIMSIFYEKNIDIFVIVSS 99

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
           D  +T+L+  L+   K+V  +    S  S            F  L 
Sbjct: 100 DSDYTSLIQKLRENKKQVIGMGLEKSIKSY-----VNAFSEFFYLD 140


>gi|227548518|ref|ZP_03978567.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM
           44291]
 gi|227079347|gb|EEI17310.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM
           44291]
          Length = 404

 Score = 76.2 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 59/181 (32%), Gaps = 27/181 (14%)

Query: 6   EKIALFIDGANL---YASSKALGF----DIDYRKLLKAFRS------RAIVIRAYYYTTV 52
           E+  +F+D + L   + +S  +G     +ID  +++    +         + R Y+Y  +
Sbjct: 3   ERTLVFVDTSYLLASFYNSWEIGARAQLEIDLPEVVSTLGAMITHQLHQPIHRQYWYDGI 62

Query: 53  VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG 112
                 ++       D     G Q+      E+    G +R +  +D  L  D    +  
Sbjct: 63  PDSGPHRYQRALRTCD-----GVQLRTGQLIEW----GERRTQKGVDTRLVADLVVNASR 113

Query: 113 --LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
                 V+ SGD      V        +V +           S  LR   D    L   +
Sbjct: 114 QQFTDFVLLSGDADMIPGVEEATGFGVRVHLYGFG---WDSMSTALRHSCDSTTILDPRE 170

Query: 171 N 171
           +
Sbjct: 171 D 171


>gi|84495933|ref|ZP_00994787.1| hypothetical protein JNB_00400 [Janibacter sp. HTCC2649]
 gi|84382701|gb|EAP98582.1| hypothetical protein JNB_00400 [Janibacter sp. HTCC2649]
          Length = 309

 Score = 75.8 bits (185), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 56/200 (28%), Gaps = 50/200 (25%)

Query: 1   MFDPREKIALFIDGANLYAS----------------------------SKALGFDIDYRK 32
           M D   ++A+++D  N+  S                            ++    ++D   
Sbjct: 1   MPDSS-RVAVYLDFDNMVISRYDNLHGNNSWRNDNARDHRPGGGDATDTRLAQAEVDLGA 59

Query: 33  LLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRK 92
           ++    S   V     Y          +              F                 
Sbjct: 60  IIDYASSFGTVALTRAYADWSVPANAAYKHQLIDRAVDLVQLF--------------ATS 105

Query: 93  RVKSSMDVELAVDAF-EQSEGLE--HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDP 149
             K+  D+ L++DA  +  +  +  H+VI +GD  +  L    +R  + V  +       
Sbjct: 106 GTKNGADIRLSIDAVNDLVDHKDLTHVVIVAGDSDYIALAQRCRRMGRFVVGI----GVT 161

Query: 150 SMASDQLRRQADYFMDLAYL 169
              S  L    D F D   L
Sbjct: 162 GSTSRALVAACDEFSDYGDL 181


>gi|86153669|ref|ZP_01071872.1| Protein of unknown function family [Campylobacter jejuni subsp.
           jejuni HB93-13]
 gi|85842630|gb|EAQ59842.1| Protein of unknown function family [Campylobacter jejuni subsp.
           jejuni HB93-13]
          Length = 232

 Score = 75.8 bits (185), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 50/166 (30%), Gaps = 29/166 (17%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
            + IA+FID  N+   +K      D             VI    Y        Q +    
Sbjct: 3   NKSIAIFIDAENIP--AKYAKSIFDI------ASDYGEVIIKRIYGDWTQKNIQGW---- 50

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGD 122
                      +      ++F         K+S D+ L  +       + ++  VI S D
Sbjct: 51  ------REQIAEYSLIAMQQF----NFAANKNSSDMYLITEIMSIFYEKNIDIFVIVSSD 100

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
             +T+L+  L+   K+V  +    S  S            F  L  
Sbjct: 101 SDYTSLIQKLRENKKQVIGMGLEKSIKSY-----VNAFSEFFYLDK 141


>gi|118463148|ref|YP_883698.1| hypothetical protein MAV_4568 [Mycobacterium avium 104]
 gi|118164435|gb|ABK65332.1| conserved hypothetical protein [Mycobacterium avium 104]
          Length = 284

 Score = 75.8 bits (185), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 55/198 (27%), Gaps = 45/198 (22%)

Query: 9   ALFIDGANLYASS-----------------------KALGFDIDYRKLLKAFRSRAIVIR 45
           A+++D  N+  S                        +     +D   +L    S   ++ 
Sbjct: 2   AVYLDFDNIVISRYDQIHGRNSFQRDKAKGLEQFTERLEQATVDVGAILDFASSFGTLVL 61

Query: 46  AYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVD 105
              Y     +    +              F                   K+  D+ LAVD
Sbjct: 62  TRAYADWSAEINAGYRGQLVARAVDLVQLF-------------PAAAYGKNGADIRLAVD 108

Query: 106 AFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162
           A E       L H+VI +GD  +  L    +R  + V  +         +S  L    D 
Sbjct: 109 AVEDMFRLPDLTHVVIVAGDSDYIPLAQRCKRLGRYVVGI----GVAGASSRALAAACDE 164

Query: 163 FMDLAYLKNE--IARDPD 178
           F+    L     + R P 
Sbjct: 165 FVIYDALPGVTALDRTPA 182


>gi|21226782|ref|NP_632704.1| hypothetical protein MM_0680 [Methanosarcina mazei Go1]
 gi|20905077|gb|AAM30376.1| conserved protein [Methanosarcina mazei Go1]
          Length = 197

 Score = 75.8 bits (185), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 61/186 (32%), Gaps = 39/186 (20%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
           R KI L +DG N+        FD++  ++    +    +     +               
Sbjct: 23  RRKIGLLVDGPNI----LRKEFDVNLEEIRDVLKDYGNIKIGRVFLN--------QYASD 70

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGD 122
            L++ +  +G + +                 S +DV LAV+  E      ++ L I + D
Sbjct: 71  KLVEAIENHGLEPIIC--------------SSDVDVRLAVEGMELVYNPNIDTLAIVTRD 116

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA-------YLKNEIAR 175
             F  L+       K+  I           S  L+  ADY + +          ++E  +
Sbjct: 117 ADFKPLLNKANEHGKETIIFGVEPGF----STALKNSADYVILMGKNHMSGYDDEDEEGK 172

Query: 176 DPDEDK 181
               ++
Sbjct: 173 PDASER 178


>gi|20092653|ref|NP_618728.1| hypothetical protein MA3857 [Methanosarcina acetivorans C2A]
 gi|19917935|gb|AAM07208.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
          Length = 195

 Score = 75.8 bits (185), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 55/166 (33%), Gaps = 32/166 (19%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
           R KI L +DG N+        FD++  ++    +    +     +               
Sbjct: 25  RRKIGLLVDGPNI----LRKEFDVNLEEIRDVLKDYGNIKIGRVFLN--------QYASD 72

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGD 122
            L++ +  +G + +                 S +DV LAV+  E      ++ L I + D
Sbjct: 73  KLVEAIENHGLEPIIC--------------SSDVDVRLAVEGMELVYNPNIDTLAIVTRD 118

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
             F  L+       K+  I           S  L+  ADY + +  
Sbjct: 119 ADFKPLLNKANEHGKETIIFGVEPGF----STALKNSADYVILMDK 160


>gi|11498667|ref|NP_069895.1| hypothetical protein AF1062 [Archaeoglobus fulgidus DSM 4304]
 gi|2649525|gb|AAB90177.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
          Length = 177

 Score = 75.8 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 64/182 (35%), Gaps = 32/182 (17%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
              R K+ + +DG N+        F+I+ +++ +       +  A  +            
Sbjct: 22  LSQRRKVGVLVDGPNM----LRKEFNINLKEIREILSEYGDIKIAKVFLN--------QY 69

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIF 119
               L++ +   GF+ +                   +DV +AV+A E      ++ + + 
Sbjct: 70  ATEKLVEAIENQGFEPIV--------------TSGDVDVRMAVEAMELIYNDSIDAVALV 115

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
           + D  F  ++       K+  I+          S  L+  AD  + L   + +   D DE
Sbjct: 116 TRDADFKAVLMKAMEMGKETIIIGAEPGF----STALKNSADIAIVLNEDEEKEKGDADE 171

Query: 180 DK 181
           ++
Sbjct: 172 EE 173


>gi|86149532|ref|ZP_01067762.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|86151302|ref|ZP_01069517.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|88597420|ref|ZP_01100655.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|121612716|ref|YP_999908.1| hypothetical protein CJJ81176_0220 [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|157414498|ref|YP_001481754.1| hypothetical protein C8J_0178 [Campylobacter jejuni subsp. jejuni
           81116]
 gi|167004869|ref|ZP_02270627.1| hypothetical protein Cjejjejuni_01040 [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|218561868|ref|YP_002343647.1| hypothetical protein Cj0189c [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
 gi|315123788|ref|YP_004065792.1| hypothetical protein ICDCCJ07001_182 [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
 gi|85839800|gb|EAQ57059.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|85841649|gb|EAQ58896.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|87250099|gb|EAQ73057.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|88190481|gb|EAQ94455.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|112359574|emb|CAL34358.1| conserved hypothetical protein Cj0189c [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|157385462|gb|ABV51777.1| hypothetical protein C8J_0178 [Campylobacter jejuni subsp. jejuni
           81116]
 gi|284925481|gb|ADC27833.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           IA3902]
 gi|307747140|gb|ADN90410.1| Putative uncharacterized protein [Campylobacter jejuni subsp.
           jejuni M1]
 gi|315017510|gb|ADT65603.1| hypothetical protein ICDCCJ07001_182 [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
 gi|315928120|gb|EFV07438.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           DFVF1099]
 gi|315931995|gb|EFV10948.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
           327]
          Length = 232

 Score = 75.8 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 50/166 (30%), Gaps = 29/166 (17%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
            + IA+FID  N+   +K      D             VI    Y        Q +    
Sbjct: 3   NKSIAIFIDAENIP--AKYAKSIFDI------ASDYGEVIIKRIYGDWTQKNIQGW---- 50

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGD 122
                      +      ++F         K+S D+ L  +       + ++  VI S D
Sbjct: 51  ------REQIAEYSLIAMQQF----NFAANKNSSDMYLITEIMSIFYEKNIDIFVIVSSD 100

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
             +T+L+  L+   K+V  +    S  S            F  L  
Sbjct: 101 SDYTSLIQKLRENKKQVIGMGLEKSIKSY-----VNAFSEFFYLDK 141


>gi|57237194|ref|YP_178206.1| hypothetical protein CJE0182 [Campylobacter jejuni RM1221]
 gi|57165998|gb|AAW34777.1| conserved hypothetical protein [Campylobacter jejuni RM1221]
 gi|315057626|gb|ADT71955.1| hypothetical protein CJS3_0185 [Campylobacter jejuni subsp. jejuni
           S3]
          Length = 232

 Score = 75.8 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 50/166 (30%), Gaps = 29/166 (17%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
            + IA+FID  N+   +K      D             VI    Y        Q +    
Sbjct: 3   NKSIAIFIDAENIP--AKYTKSIFDI------ASDYGEVIIKRIYGDWTQKNIQGW---- 50

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGD 122
                      +      ++F         K+S D+ L  +       + ++  VI S D
Sbjct: 51  ------REQIAEYSLIAMQQF----NFAANKNSSDMYLITEIMSIFYEKNIDIFVIVSSD 100

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
             +T+L+  L+   K+V  +    S  S            F  L  
Sbjct: 101 SDYTSLIQKLRENKKQVIGMGLEKSIKSY-----VNAFSEFFYLDK 141


>gi|284161858|ref|YP_003400481.1| hypothetical protein Arcpr_0744 [Archaeoglobus profundus DSM 5631]
 gi|284011855|gb|ADB57808.1| protein of unknown function DUF88 [Archaeoglobus profundus DSM
           5631]
          Length = 171

 Score = 75.4 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 60/167 (35%), Gaps = 32/167 (19%)

Query: 3   DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
           + R++IA+ +DG N+        F+++  ++    +    +  A  +       +     
Sbjct: 25  ESRKRIAVLVDGPNM----LRKEFNLNLSEIRDILKEYGDIKVAKVFLNQYATDK----- 75

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFS 120
              L++ +   GF+ V                   +DV +AV+A +      ++ L + +
Sbjct: 76  ---LVEAVENQGFEPVI--------------TSGDVDVRMAVEAMDLIYNDLIDVLALVT 118

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
            D  F  ++       K+  I+          S  L+  AD  + L 
Sbjct: 119 RDADFKAVLKKAMEMGKETIIIGAEPGF----STALKNSADIAIILN 161


>gi|295836648|ref|ZP_06823581.1| conserved hypothetical protein [Streptomyces sp. SPB74]
 gi|295826135|gb|EFG64694.1| conserved hypothetical protein [Streptomyces sp. SPB74]
          Length = 310

 Score = 75.4 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 39/188 (20%), Positives = 63/188 (33%), Gaps = 32/188 (17%)

Query: 9   ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRS-------RAIVIRAYYYTTVV 53
           A+F+D   LYA++  L        GFD+D + L+ A           + ++R Y+Y    
Sbjct: 33  AIFVDAGYLYAAAGRLVAGTEDRKGFDLDAQGLIDALVDCASHVFPHSRLLRVYWYDGAR 92

Query: 54  GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
                        L               K    N      +  +D  +  D    +   
Sbjct: 93  RRIHTAEQQSIAELP------------DVKVRLGNLNANNQQKGVDSLIRGDIESLARHR 140

Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVS-TVLSDPSMASDQLRRQAD--YFMDLAY 168
            +   V+  GD      V A Q    +V +            +D L  +AD    +DLA+
Sbjct: 141 AIGDAVLLGGDEDLVPAVEAAQDFGARVHLWGIEAPEGLRNQADPLLWEADAQRTLDLAF 200

Query: 169 LKNEIARD 176
           LK  +AR 
Sbjct: 201 LKPYVARR 208


>gi|297157475|gb|ADI07187.1| hypothetical protein SBI_04066 [Streptomyces bingchenggensis BCW-1]
          Length = 310

 Score = 75.4 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 62/189 (32%), Gaps = 31/189 (16%)

Query: 9   ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53
           A+F+D   +YA++  L         F++D   L++AF  +A        ++R Y+Y    
Sbjct: 41  AIFVDAGYVYAAAGRLVAGTEDRRTFELDAEGLIEAFIDKARTIFPDSRLLRVYWYDGAR 100

Query: 54  GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
                        L               K    N      +  +D  +  D    +   
Sbjct: 101 RRIHTSEQQSIAELP------------DVKVRLGNLNANNQQKGVDSLIRSDLESLARHR 148

Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169
            +   V+  GD    + V A Q    +V +      +    ++ L  + D     DL + 
Sbjct: 149 AIGDAVLIGGDEDLVSAVEAAQGYGARVHLWGIEAVEGRNQAEPLLWEVDSQRTFDLDFC 208

Query: 170 KNEIARDPD 178
           K  + R P 
Sbjct: 209 KPYVTRRPA 217


>gi|172039786|ref|YP_001799500.1| hypothetical protein cur_0106 [Corynebacterium urealyticum DSM
           7109]
 gi|171851090|emb|CAQ04066.1| hypothetical protein cu0106 [Corynebacterium urealyticum DSM 7109]
          Length = 513

 Score = 75.4 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 64/181 (35%), Gaps = 27/181 (14%)

Query: 6   EKIALFIDGANL---YASSKALGF----DIDYRKLLKAFRS------RAIVIRAYYYTTV 52
           E+  +F+D + L   + +S   G     +ID  +++           +  + R ++Y  +
Sbjct: 3   ERTQIFVDTSYLLASFYNSWETGARAQLEIDLPEVVCTLGRIAQDQLKQPIHRQFWYDGI 62

Query: 53  VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS-- 110
                 ++             G Q+ +    E+    G +R + ++D  L  D    +  
Sbjct: 63  PESGPHRYQRSL-----RSEPGVQLRSGQLIEW----GDRRTQKAVDTRLVADMVLAAVR 113

Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
             +  +V+ SGD      V        +V +        SM+S  LR   D    L   +
Sbjct: 114 GNVSDIVLVSGDADMLPGVEEAVDAGIRVHLYGF--GWDSMSSQ-LRFACDTTTILDPRE 170

Query: 171 N 171
           +
Sbjct: 171 D 171


>gi|282165479|ref|YP_003357864.1| hypothetical protein MCP_2809 [Methanocella paludicola SANAE]
 gi|282157793|dbj|BAI62881.1| conserved hypothetical protein [Methanocella paludicola SANAE]
          Length = 188

 Score = 75.4 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 54/165 (32%), Gaps = 32/165 (19%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
           R  IAL +DG N+        F ID   +    +    +     +               
Sbjct: 31  RRNIALLVDGPNM----LRKEFQIDLEVVRDILKRYGDIKVGKVFLN--------QYASD 78

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGD 122
            L++ +   GF+ +                   +DV LAVDA E   S  ++ + I + D
Sbjct: 79  KLVEAIENQGFEPII--------------GSGDVDVRLAVDAVELVFSPTIDTIAIVTRD 124

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
             F  ++A      K+  +           S  L+  AD+ +   
Sbjct: 125 ADFKPVLAKANSHGKETIVFGAEPGL----SIALKNVADFVIVFD 165


>gi|149179181|ref|ZP_01857749.1| hypothetical protein PM8797T_16967 [Planctomyces maris DSM 8797]
 gi|148841999|gb|EDL56394.1| hypothetical protein PM8797T_16967 [Planctomyces maris DSM 8797]
          Length = 210

 Score = 75.4 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/176 (19%), Positives = 65/176 (36%), Gaps = 20/176 (11%)

Query: 4   PREKIALFIDGANLYASSKALGFD----IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
            +++  ++IDG NLY   K  G+     +D  K  +A      VI   Y+T +V  P  +
Sbjct: 8   KKQRTVIYIDGFNLYFGMKDNGWKRYYWLDLWKFGEAISQDREVISVKYFTAIVSKPAAK 67

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCG--------RKRVKSSMDVELAVDAFEQS- 110
                  +               K +++            +  +   DV +A      + 
Sbjct: 68  NVRQRKFISAQKTLNNPPDIIKGKYYSKTKHCLSCEEPYERHEEKMTDVNIATHLVNDAW 127

Query: 111 -EGLEHLVIFSGDGCFTTLVAAL--QRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163
            +  +  ++ SGD   +T +  +  Q + KKV +       P+  S QL+    +F
Sbjct: 128 LDLYDVAIVVSGDSDLSTPIRTVNNQFEDKKVIV----GFPPNRHSKQLKGLGSWF 179


>gi|266624411|ref|ZP_06117346.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479]
 gi|288863732|gb|EFC96030.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479]
          Length = 259

 Score = 75.4 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/149 (20%), Positives = 61/149 (40%), Gaps = 24/149 (16%)

Query: 6   EKIALFIDGANLYASSKALGFDIDYRK-----LLKAFRSRAIV--IRAYYYTTVVGDPEQ 58
           E + +F+D  N+Y S K  G + +  +     L++   S   +  +RAY     VG   +
Sbjct: 18  ENVGIFVDFDNIYYSLKEYGVNPESPEYCVFSLMERIYSINKIRTLRAYADYDQVGVSLK 77

Query: 59  QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEH 115
               +   +  ++ NG +               +  K++ D+EL+VDA E    S  ++ 
Sbjct: 78  HLQEMRVQIKNVYGNGLE--------------EEYRKNASDIELSVDALEIYYRSPEIDT 123

Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVST 144
            V  + D     +++ L  K K + +   
Sbjct: 124 FVFLTSDSDMIPIMSRLTYKGKHIHLFCI 152


>gi|20094200|ref|NP_614047.1| hypothetical protein MK0763 [Methanopyrus kandleri AV19]
 gi|19887222|gb|AAM01977.1| Uncharacterized conserved protein [Methanopyrus kandleri AV19]
          Length = 179

 Score = 75.4 bits (184), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 62/177 (35%), Gaps = 32/177 (18%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           IA+ IDG N+        FD+  +++ +       +     +                L+
Sbjct: 24  IAMLIDGPNM----LRKEFDVSLKEVRELVEELGNIRVGLAFLN--------QYASDKLI 71

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCF 125
           + +   GF                      +DV LAV+A E   S+ ++ + + + D  F
Sbjct: 72  EAVANQGFVPRVIP--------------GDVDVYLAVEAMELIYSDNVDAIALMTRDTDF 117

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182
             ++A  + + K   ++          S  L+  ADY + L   K   +   +E  +
Sbjct: 118 LPIIAKAKEQGKVTIVIGADPGF----STALQNAADYVIKLKPRKERESEGKEEKPE 170


>gi|282865441|ref|ZP_06274493.1| hypothetical protein SACTEDRAFT_5038 [Streptomyces sp. ACTE]
 gi|282559914|gb|EFB65464.1| hypothetical protein SACTEDRAFT_5038 [Streptomyces sp. ACTE]
          Length = 303

 Score = 75.1 bits (183), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 61/188 (32%), Gaps = 31/188 (16%)

Query: 9   ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53
           A+F+D   +YA++  L         FD+D   L++AF  +A        ++R Y+Y    
Sbjct: 40  AIFVDAGYVYAAAGLLVTGTEDRRSFDLDAEGLIEAFIDKARTIFADSRLLRVYWYDGAR 99

Query: 54  GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
                        L               K    N      +  +D  +  D    +   
Sbjct: 100 RRIHTVEQQSIAELP------------DVKVRLGNLNANNQQKGVDSLIRSDLESLARHR 147

Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169
            +    +  GD    + V A Q    +V +      +    ++ L  + D     DL + 
Sbjct: 148 AISDAALVGGDEDLVSAVEAAQGYGARVHLWGIEAGEGRNQAEPLLWEVDSQRTFDLDFC 207

Query: 170 KNEIARDP 177
           +  + R P
Sbjct: 208 RPYVTRRP 215


>gi|283955630|ref|ZP_06373123.1| hypothetical protein C1336_000040041 [Campylobacter jejuni subsp.
           jejuni 1336]
 gi|283792855|gb|EFC31631.1| hypothetical protein C1336_000040041 [Campylobacter jejuni subsp.
           jejuni 1336]
          Length = 232

 Score = 75.1 bits (183), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 50/166 (30%), Gaps = 29/166 (17%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
            + IA+FID  N+   +K      D             VI    Y        Q +    
Sbjct: 3   NKSIAIFIDAENIP--AKYAKSIFDI------ASDYGEVIIKRIYGDWTQKNIQGW---- 50

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGD 122
                      +      ++F         K+S D+ L  +       + ++  VI S D
Sbjct: 51  ------REQIAEYSLIAMQQF----NFAANKNSSDMYLITEIMSIFYEKNIDIFVIVSSD 100

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
             +T+L+  L+   K+V  +    S  S            F  L  
Sbjct: 101 SDYTSLIQKLRENKKQVVGMGLEKSIKSY-----VNAFSEFFYLDK 141


>gi|53804338|ref|YP_114060.1| cold-shock DNA-binding domain-containing protein [Methylococcus
           capsulatus str. Bath]
 gi|53758099|gb|AAU92390.1| cold-shock DNA-binding domain protein [Methylococcus capsulatus
           str. Bath]
          Length = 305

 Score = 75.1 bits (183), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 72/208 (34%), Gaps = 33/208 (15%)

Query: 1   MFDPREKIALFIDGANLYASSKAL------GFDIDYRKLLKAF-----------RSRAIV 43
           M     +IA+F DG   +  S            + ++ L +                  +
Sbjct: 1   MESKLCRIAVFYDGNYFFKVSNYYLYQHPRRARLSFKGLHEFILAEVSKNEGLDARHCQI 60

Query: 44  IRAYYYTTVVGDPEQQFS----PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMD 99
           + A Y+   +   + Q            D L      +  +  +   +       +  +D
Sbjct: 61  VDAAYFRGRLTAQQAQDQDKLFADRIFEDVLMRANITLFQRHLRTRPDGS---FEEKGID 117

Query: 100 VELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS-------TVLSDPS 150
           V LA++A+E +  +  +  V+ +GDG F  LV  L     +V +++          +  +
Sbjct: 118 VWLALEAYEMASLKKYDVCVLVAGDGDFVPLVNKLNTLGSRVMLIAWDFSYVRDGRTYTT 177

Query: 151 MASDQLRRQADYFMDLAYLKNEIARDPD 178
            A+ +L  + +Y + +    +   R  D
Sbjct: 178 QAATELIDRVNYPILMNTEIDSRERRKD 205


>gi|239944100|ref|ZP_04696037.1| hypothetical protein SrosN15_24076 [Streptomyces roseosporus NRRL
           15998]
 gi|239990553|ref|ZP_04711217.1| hypothetical protein SrosN1_24813 [Streptomyces roseosporus NRRL
           11379]
 gi|291447568|ref|ZP_06586958.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
           15998]
 gi|291350515|gb|EFE77419.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
           15998]
          Length = 306

 Score = 75.1 bits (183), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 62/188 (32%), Gaps = 31/188 (16%)

Query: 9   ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53
           A+F+D   +YA++  L         FD+D   L++AF  +A        ++R Y+Y    
Sbjct: 43  AIFVDAGYVYAAAGLLVTGTEDRRSFDLDAEGLIEAFIDKARTIFADSRLLRVYWYDGAR 102

Query: 54  GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
                        L               K    N      +  +D  +  D    +   
Sbjct: 103 RRIHTTEQQAIAELP------------DVKVRLGNLNANNQQKGVDSLIRTDLESLARHR 150

Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169
            +    +  GD    + V A Q    +V +     ++    ++ L  + D     DL + 
Sbjct: 151 AISDAALVGGDEDLVSAVEAAQGYGARVHLWGIEAAEGRNQAEPLLWEVDSQRTFDLDFC 210

Query: 170 KNEIARDP 177
           +  + R P
Sbjct: 211 RPYVTRRP 218


>gi|315498578|ref|YP_004087382.1| hypothetical protein Astex_1565 [Asticcacaulis excentricus CB 48]
 gi|315416590|gb|ADU13231.1| hypothetical protein Astex_1565 [Asticcacaulis excentricus CB 48]
          Length = 254

 Score = 74.7 bits (182), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 31/176 (17%), Positives = 59/176 (33%), Gaps = 14/176 (7%)

Query: 5   REKIALFIDGANLYASSKALGF----DIDYRKLLKAFRSRAIVI-RAYYYTTVVGDPEQQ 59
           R++ A++ DG NLY +  A        +D + L +A      V+ R  + +      + +
Sbjct: 30  RKRAAVYYDGFNLYHAVDAYKRPYLKWLDLKALAQAISPSDEVVKRVVWCSAFRPQNKSK 89

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRV------KSSMDVELAVDAFEQSEG- 112
                  +  L   G            + C           +   DV LA+     +E  
Sbjct: 90  MKRHEDYMRALQARGVLCRLGHFVSAIDGCNACGHQWHLAIEKQGDVNLALSIASDAEDN 149

Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
             +   + S DG        L+ +  K  +V  V       +  + R AD  +++ 
Sbjct: 150 LFDVCYLVSADGDHAATARYLKERFPKKELV-LVCPPGRYPNKHILRFADRVVEIE 204


>gi|237800598|ref|ZP_04589059.1| hypothetical protein POR16_17368 [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331023458|gb|EGI03515.1| hypothetical protein POR16_17368 [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 274

 Score = 74.7 bits (182), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 50/161 (31%), Gaps = 30/161 (18%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           ++A+ +D  N+                LK       ++    Y                L
Sbjct: 11  RVAILVDCDNVSPEVLEHA--------LKVVAQFGRIVLRRGYGN-----------HGTL 51

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124
            +       ++      ++    G    K++ D+ LA+DA E       +   + + D  
Sbjct: 52  ANKWQEALVRLAFTPCLQYQYASG----KNTSDIALALDALEALFDHRADMFCLVTSDSD 107

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165
           F  L   L+ +   V IV           D LR  +D F +
Sbjct: 108 FAYLCRKLRERGASVCIVGE-----PKTPDALRNASDQFFE 143


>gi|332974970|gb|EGK11880.1| hypothetical protein HMPREF9374_1743 [Desmospora sp. 8437]
          Length = 273

 Score = 74.7 bits (182), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 58/171 (33%), Gaps = 17/171 (9%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRK-----LLKAFRSRAIVIRAYYYTTVVGDPEQ 58
             + I+++ID  N+Y   K    + D+        L+             +   +     
Sbjct: 3   KDKSISIWIDLENVYYGLKKYHMNPDHPDPKHNLFLRLQEHYGR------HKIRMMGVYG 56

Query: 59  QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLEH 115
            F  L P +         V     +      G +  K++ D++L +DA +       +E 
Sbjct: 57  DFEQLGPDISMNQLLKKHVHI--HQVHGNGRGEEERKNAADIQLCLDAMDVLHTVSEVET 114

Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
            VI S D     L+  L  + K+V +        S  +  L    D F +L
Sbjct: 115 FVIVSADQDMIPLMDRLWSRGKRVELFCLQDESLSRDAH-LEAFCDEFYNL 164


>gi|73667756|ref|YP_303771.1| hypothetical protein Mbar_A0207 [Methanosarcina barkeri str.
           Fusaro]
 gi|72394918|gb|AAZ69191.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
          Length = 194

 Score = 74.7 bits (182), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 56/168 (33%), Gaps = 32/168 (19%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
           R KI L +DG N+        FD++  ++    +    +     +               
Sbjct: 23  RRKIGLLVDGPNI----LRKEFDVNLEEIRDVLKDYGNIKIGRVFLN--------QYASD 70

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGD 122
            L++ +  +G + +                 S +DV LAV+  E      ++ L I + D
Sbjct: 71  KLVEAIENHGLEPIIC--------------SSDVDVRLAVEGMELVYNPNIDTLAIVTRD 116

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
             F  L+       K+  I           S  L+  ADY + +   +
Sbjct: 117 ADFKPLLNKANEHGKETIIFGVEPGF----STALKNSADYVILMKKDR 160


>gi|57168636|ref|ZP_00367768.1| conserved hypothetical protein [Campylobacter coli RM2228]
 gi|305432736|ref|ZP_07401896.1| conserved hypothetical protein [Campylobacter coli JV20]
 gi|57019917|gb|EAL56597.1| conserved hypothetical protein [Campylobacter coli RM2228]
 gi|304444245|gb|EFM36898.1| conserved hypothetical protein [Campylobacter coli JV20]
          Length = 232

 Score = 74.7 bits (182), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 50/165 (30%), Gaps = 29/165 (17%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
            + IA+FID  N+   +K      D             +I    Y        Q +    
Sbjct: 3   NKSIAIFIDAENIP--AKYAKSIFDI------ASDYGEIIIKRIYGDWTQKNIQAWKEQI 54

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGD 122
                      +      ++F         K+S D+ L  +       + ++  VI S D
Sbjct: 55  A----------EYSLIAMQQF----NFAANKNSSDMYLITEIMSIFYEKDIDIFVIVSSD 100

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
             +T+L+  L+   K+V  +    S  S            F  L 
Sbjct: 101 SDYTSLIQKLRENKKQVIGMGLEKSIKSY-----VNAFSEFFYLD 140


>gi|291437417|ref|ZP_06576807.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
 gi|291340312|gb|EFE67268.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
          Length = 319

 Score = 74.7 bits (182), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 60/187 (32%), Gaps = 31/187 (16%)

Query: 9   ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53
           A+F+D   LYA++  L         FD+D   L+ A   RA        ++R Y+Y    
Sbjct: 56  AIFVDAGYLYAAAGRLVAGTEDRRAFDLDAEGLIDALIDRARTVFADSRLLRVYWYDGAR 115

Query: 54  GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
                        L               K    N      +  +D  +  D    +   
Sbjct: 116 RRIHTAEQQSIAELP------------DVKVRLGNLNANNQQKGVDSLIRTDLESLARHR 163

Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169
            +    +  GD    + V A Q    +V +      +    ++ L  + D    +DL + 
Sbjct: 164 AISDAALLGGDEDLVSAVEAAQGYGARVHLWGIEAPEGRNQAEPLLWEVDSQRTLDLDFF 223

Query: 170 KNEIARD 176
           K  ++R 
Sbjct: 224 KPYVSRR 230


>gi|150400659|ref|YP_001324425.1| hypothetical protein Maeo_0221 [Methanococcus aeolicus Nankai-3]
 gi|150013362|gb|ABR55813.1| protein of unknown function DUF88 [Methanococcus aeolicus Nankai-3]
          Length = 193

 Score = 74.3 bits (181), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 57/164 (34%), Gaps = 32/164 (19%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           ++AL IDG N+        F+ID  K+ +       V+    Y                L
Sbjct: 23  RMALLIDGPNM----LRKEFNIDLDKIREVLDEFGSVVVGRVYLN--------QYASDKL 70

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124
           ++ +   G++                     +DVE+AVD  E    + ++ ++  + D  
Sbjct: 71  IEAIANQGYEPKV--------------SAGDVDVEMAVDGTELIFNDTIDTIIYMTRDAD 116

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
           F   +   +   K + I+          S  ++  ADY + +  
Sbjct: 117 FLPAIRKAKEHGKNIIIIGAEPGF----STAIQNIADYVIKIED 156


>gi|328884857|emb|CCA58096.1| hypothetical protein SVEN_4810 [Streptomyces venezuelae ATCC 10712]
          Length = 322

 Score = 74.3 bits (181), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 62/188 (32%), Gaps = 31/188 (16%)

Query: 9   ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53
           A+F+D   ++A++  L         FD+D   L++AF  +A        ++R Y+Y    
Sbjct: 58  AIFVDAGYVHAAAGLLVAGTEDRRSFDLDAEGLIEAFIDKARTIFADSRLLRVYWYDGAR 117

Query: 54  GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
                        L               K    N      +  +D  +  D    +   
Sbjct: 118 RRIHTPEQQAIAELP------------DVKVRLGNLNANNQQKGVDSLIRTDLESLARHR 165

Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169
            +    +  GD    + V A Q    +V +     ++    ++ L  + D     +L + 
Sbjct: 166 AISDAALVGGDEDLVSAVEAAQGYGARVHLWGIEAAEGRNQAEALLWEVDSQRTFELDFC 225

Query: 170 KNEIARDP 177
           +  + R P
Sbjct: 226 RPYVTRRP 233


>gi|182436154|ref|YP_001823873.1| hypothetical protein SGR_2361 [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178464670|dbj|BAG19190.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
           NBRC 13350]
          Length = 303

 Score = 74.3 bits (181), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 62/188 (32%), Gaps = 31/188 (16%)

Query: 9   ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53
           A+F+D   +YA++  L         FD+D   L++AF  +A        ++R Y+Y    
Sbjct: 40  AIFVDAGYVYAAAGLLVTGTEDRRSFDLDAEGLIEAFIDKARTIFADSRLLRVYWYDGAR 99

Query: 54  GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
                        L               K    N      +  +D  +  D    +   
Sbjct: 100 RRIHTTEQQAIAELP------------DVKVRLGNLNANNQQKGVDSLIRTDLESLARHR 147

Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169
            +    +  GD    + V A Q    +V +     ++    ++ L  + D     +L + 
Sbjct: 148 AISDAALVGGDEDLVSAVEAAQGYGARVHLWGIEAAEGRNQAEPLLWEVDSQRTFELDFC 207

Query: 170 KNEIARDP 177
           +  + R P
Sbjct: 208 RPYVTRRP 215


>gi|326776780|ref|ZP_08236045.1| Domain of unknown function DUF88 protein [Streptomyces cf. griseus
           XylebKG-1]
 gi|326657113|gb|EGE41959.1| Domain of unknown function DUF88 protein [Streptomyces cf. griseus
           XylebKG-1]
          Length = 303

 Score = 73.9 bits (180), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 62/188 (32%), Gaps = 31/188 (16%)

Query: 9   ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53
           A+F+D   +YA++  L         FD+D   L++AF  +A        ++R Y+Y    
Sbjct: 40  AIFVDAGYVYAAAGLLVTGTEDRRSFDLDAEGLIEAFIDKARTIFADSRLLRVYWYDGAR 99

Query: 54  GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
                        L               K    N      +  +D  +  D    +   
Sbjct: 100 RRIHTTEQQAIAELP------------DVKVRLGNLNANNQQKGVDSLIRTDLESLARHR 147

Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169
            +    +  GD    + V A Q    +V +     ++    ++ L  + D     +L + 
Sbjct: 148 AISDAALVGGDEDLVSAVEAAQGYGARVHLWGIEAAEGRNQAEPLLWEVDSQRTFELDFC 207

Query: 170 KNEIARDP 177
           +  + R P
Sbjct: 208 RPYVTRRP 215


>gi|85703543|ref|ZP_01034647.1| hypothetical protein ROS217_22417 [Roseovarius sp. 217]
 gi|85672471|gb|EAQ27328.1| hypothetical protein ROS217_22417 [Roseovarius sp. 217]
          Length = 242

 Score = 73.9 bits (180), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 51/159 (32%), Gaps = 37/159 (23%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           ++++F+D  N+  S       +D    L         +RAY    ++ D ++        
Sbjct: 14  RLSVFVDADNI--SVTHAQTILD----LARRHGAPDQLRAYGNVGLLPDWDK-------- 59

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDGC 124
                            +F  +      K++ D+ + +DA E   S+    +++ S D  
Sbjct: 60  -------------VPGFQFIHSG---SGKNATDMLMCIDAMERALSDQCAAVLLVSSDQD 103

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163
           FT L   L+     V       +         R     F
Sbjct: 104 FTHLATRLRGYGLTVIGAGEAKTLER-----FRAACSEF 137


>gi|256785360|ref|ZP_05523791.1| hypothetical protein SlivT_12796 [Streptomyces lividans TK24]
          Length = 298

 Score = 73.9 bits (180), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 61/187 (32%), Gaps = 31/187 (16%)

Query: 9   ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53
           A+F+D   LYA++  L         FD+D   L++A   RA        ++R Y+Y    
Sbjct: 34  AIFVDAGYLYAAAGRLVAGTEDRRAFDLDAEGLIEALIDRARNIFADSRLLRVYWYDGAR 93

Query: 54  GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
                        L               K    N      +  +D  +  D    +   
Sbjct: 94  RRIHTAEQQSIAELP------------DVKVRLGNLNANNQQKGVDSLIRTDLESLARHR 141

Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169
            +    +  GD    + V A Q    +V +      +    ++ L  + D    +DL + 
Sbjct: 142 AISDAALLGGDEDLVSAVEAAQGFGARVHLWGIEAPEGRNQAEPLLWEVDSQRTLDLDFF 201

Query: 170 KNEIARD 176
           K  ++R 
Sbjct: 202 KPYVSRR 208


>gi|21223533|ref|NP_629312.1| hypothetical protein SCO5164 [Streptomyces coelicolor A3(2)]
 gi|289769257|ref|ZP_06528635.1| conserved hypothetical protein [Streptomyces lividans TK24]
 gi|9714449|emb|CAC01365.1| hypothetical protein [Streptomyces coelicolor A3(2)]
 gi|289699456|gb|EFD66885.1| conserved hypothetical protein [Streptomyces lividans TK24]
          Length = 301

 Score = 73.9 bits (180), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 61/187 (32%), Gaps = 31/187 (16%)

Query: 9   ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53
           A+F+D   LYA++  L         FD+D   L++A   RA        ++R Y+Y    
Sbjct: 37  AIFVDAGYLYAAAGRLVAGTEDRRAFDLDAEGLIEALIDRARNIFADSRLLRVYWYDGAR 96

Query: 54  GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
                        L               K    N      +  +D  +  D    +   
Sbjct: 97  RRIHTAEQQSIAELP------------DVKVRLGNLNANNQQKGVDSLIRTDLESLARHR 144

Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169
            +    +  GD    + V A Q    +V +      +    ++ L  + D    +DL + 
Sbjct: 145 AISDAALLGGDEDLVSAVEAAQGFGARVHLWGIEAPEGRNQAEPLLWEVDSQRTLDLDFF 204

Query: 170 KNEIARD 176
           K  ++R 
Sbjct: 205 KPYVSRR 211


>gi|300933975|ref|ZP_07149231.1| hypothetical protein CresD4_07892 [Corynebacterium resistens DSM
           45100]
          Length = 482

 Score = 73.9 bits (180), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 65/181 (35%), Gaps = 27/181 (14%)

Query: 6   EKIALFIDGANL---YASSKALGF----DIDYRKLLKAFRS------RAIVIRAYYYTTV 52
           E+  +++D + L   + ++   G     +ID  +++    +      +  V R ++Y  +
Sbjct: 3   ERTQVYVDTSYLLASFYNAWETGARAQLEIDLPEVVSVLSTMVQNQLKQPVHRQFWYDGI 62

Query: 53  VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS-- 110
             +   ++             G Q+ A    E+    G +R + ++D  L  D    +  
Sbjct: 63  PENGPHRYQRSL-----RSEPGVQLRAGQLIEW----GDRRTQKAVDTRLVADMVIAAMK 113

Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
             +  +V+ SGD      V        +V +           S+QLR   D    L   +
Sbjct: 114 GQVSDIVLVSGDADMLPGVEEAVAAGIRVHLYGFG---WDSMSNQLRYACDTTTILDPRE 170

Query: 171 N 171
           +
Sbjct: 171 D 171


>gi|302553970|ref|ZP_07306312.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM
           40736]
 gi|302471588|gb|EFL34681.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM
           40736]
          Length = 305

 Score = 73.9 bits (180), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 60/187 (32%), Gaps = 31/187 (16%)

Query: 9   ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53
           A+F+D   LYA++  L         FD+D   L+ A   +A        ++R Y+Y    
Sbjct: 42  AIFVDAGYLYAAAGRLVAGTEDRRAFDLDPEGLIDALIDKARTIFADSRLLRVYWYDGAR 101

Query: 54  GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
                        L               K    N      +  +D  +  D    +   
Sbjct: 102 RRIHTAEQQSIAELP------------DVKVRLGNLNANNQQKGVDSLIRTDLESLARHR 149

Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169
            +    +  GD    + V A Q    +V +      +    ++ L  + D    +DL + 
Sbjct: 150 AISDAALLGGDEDLVSAVEAAQGYGARVHLWGIEAPEGRNQAEPLLWEVDSQRTLDLDFF 209

Query: 170 KNEIARD 176
           K  ++R 
Sbjct: 210 KPYVSRR 216


>gi|14520299|ref|NP_125774.1| hypothetical protein PAB0043 [Pyrococcus abyssi GE5]
 gi|5457514|emb|CAB49005.1| Conserved archaebacterial protein, DUF88 family [Pyrococcus abyssi
           GE5]
          Length = 162

 Score = 73.9 bits (180), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 58/168 (34%), Gaps = 32/168 (19%)

Query: 6   EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
           + I L IDG N+        F I    + KA      +  A                   
Sbjct: 21  KTIGLIIDGPNI----LRKEFGIKLEDIKKALERIGKIRVAKVVLNQYAP--------QG 68

Query: 66  LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDG 123
           L++ +   GF+ +               V    DV +A++A E      ++ + + + D 
Sbjct: 69  LIEAVVNQGFEPII--------------VAGDTDVRMAIEAMELIYNADVDVIALATRDA 114

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
            F  L++  +RK K+  ++          S  L+  ADY + +   K 
Sbjct: 115 DFLPLISEAKRKGKETVVIGVEPGF----SVALQNAADYIIKMEKKKE 158


>gi|55378280|ref|YP_136130.1| hypothetical protein rrnAC1502 [Haloarcula marismortui ATCC 43049]
 gi|55231005|gb|AAV46424.1| unknown [Haloarcula marismortui ATCC 43049]
          Length = 148

 Score = 73.9 bits (180), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 56/166 (33%), Gaps = 31/166 (18%)

Query: 3   DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
           D  +++ LF+DG N+        FD+D  ++         +     Y           + 
Sbjct: 12  DSPQRVGLFVDGPNV----LRSEFDVDLDEVRDIAAEYGPLAVTRLYV--------DQNA 59

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFS 120
              L+      GF+V                    +DV LAVDA   +    ++ L + S
Sbjct: 60  SPGLIQAAEARGFEVRT--------------TSGDVDVRLAVDATNAAVAGQIDVLAVAS 105

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
            D  F   +    R+  K   ++         SD LR  A+  + L
Sbjct: 106 RDTDFKPALEVAAREGVKTVAIAPGEYGR---SDALRNAAEDAVTL 148


>gi|306834717|ref|ZP_07467784.1| conserved hypothetical protein [Corynebacterium accolens ATCC
           49726]
 gi|304569388|gb|EFM44886.1| conserved hypothetical protein [Corynebacterium accolens ATCC
           49726]
          Length = 384

 Score = 73.9 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 56/181 (30%), Gaps = 27/181 (14%)

Query: 6   EKIALFIDGANL---YASSKALGF----DIDYRKLLKAFRS------RAIVIRAYYYTTV 52
           E+  +F+D + L   + +S   G     +ID  +++              + R Y+Y  +
Sbjct: 3   ERTLVFVDTSYLLASFYNSWETGARAQLEIDLPEVVSTMGGMIEEQLGNPIQRQYWYDGI 62

Query: 53  VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS-- 110
                 ++       +     G Q+      E+    G +R +  +D  L  D    +  
Sbjct: 63  PDTGPHRYQRALRTCE-----GVQLRTGQLIEW----GERRTQKGVDTRLVADMVMAAVK 113

Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
                 V+ SGD               +V +           S  LR   D    L   +
Sbjct: 114 NQFTDFVLVSGDADMIPGAQTAVDNGIRVHLYGFG---WDSMSAALRHTCDSTTILDPRE 170

Query: 171 N 171
           +
Sbjct: 171 D 171


>gi|227502160|ref|ZP_03932209.1| conserved hypothetical protein [Corynebacterium accolens ATCC
           49725]
 gi|227076984|gb|EEI14947.1| conserved hypothetical protein [Corynebacterium accolens ATCC
           49725]
          Length = 391

 Score = 73.9 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 56/181 (30%), Gaps = 27/181 (14%)

Query: 6   EKIALFIDGANL---YASSKALGF----DIDYRKLLKAFRS------RAIVIRAYYYTTV 52
           E+  +F+D + L   + +S   G     +ID  +++              + R Y+Y  +
Sbjct: 3   ERTLVFVDTSYLLASFYNSWETGARAQLEIDLPEVVSTMGGMIEEQLGNPIQRQYWYDGI 62

Query: 53  VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS-- 110
                 ++       +     G Q+      E+    G +R +  +D  L  D    +  
Sbjct: 63  PDTGPHRYQRALRTCE-----GVQLRTGQLIEW----GERRTQKGVDTRLVADMVMAAVK 113

Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
                 V+ SGD               +V +           S  LR   D    L   +
Sbjct: 114 NQFTDFVLVSGDADMIPGAQTAVDNGIRVHLYGFG---WDSMSAALRHTCDSTTILDPRE 170

Query: 171 N 171
           +
Sbjct: 171 D 171


>gi|239929080|ref|ZP_04686033.1| hypothetical protein SghaA1_12721 [Streptomyces ghanaensis ATCC
           14672]
          Length = 297

 Score = 73.9 bits (180), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 60/187 (32%), Gaps = 31/187 (16%)

Query: 9   ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53
           A+F+D   LYA++  L         FD+D   L+ A   RA        ++R Y+Y    
Sbjct: 34  AIFVDAGYLYAAAGRLVAGTEDRRAFDLDAEGLIDALIDRARTVFADSRLLRVYWYDGAR 93

Query: 54  GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
                        L               K    N      +  +D  +  D    +   
Sbjct: 94  RRIHTAEQQSIAELP------------DVKVRLGNLNANNQQKGVDSLIRTDLESLARHR 141

Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169
            +    +  GD    + V A Q    +V +      +    ++ L  + D    +DL + 
Sbjct: 142 AISDAALLGGDEDLVSAVEAAQGYGARVHLWGIEAPEGRNQAEPLLWEVDSQRTLDLDFF 201

Query: 170 KNEIARD 176
           K  ++R 
Sbjct: 202 KPYVSRR 208


>gi|18977686|ref|NP_579043.1| hypothetical protein PF1314 [Pyrococcus furiosus DSM 3638]
 gi|18893418|gb|AAL81438.1| hypothetical protein PF1314 [Pyrococcus furiosus DSM 3638]
          Length = 185

 Score = 73.5 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/163 (22%), Positives = 58/163 (35%), Gaps = 25/163 (15%)

Query: 7   KIALFIDGANLYASSKA-------LGFDIDYRKLLKAFRS-RAIVIRAYYYTTVVGDPEQ 58
           K A+ IDG N+    K        L  DID+RK  +  +S    V  A  Y         
Sbjct: 2   KAAVLIDGENVVMCLKNALGGKVQLDRDIDWRKFFEYLKSLGYEVTIARIYAN-----PF 56

Query: 59  QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEH 115
            F     + + L   G +VV   +            KS+ D  + VD          ++ 
Sbjct: 57  IFLKNPHIANNLEKMGIKVVLAESTMKENGP-----KSTTDATMIVDGMSILYERPAIDA 111

Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRR 158
           L+I SGD  F  L    +   + V  V+     P   ++ ++ 
Sbjct: 112 LIIVSGDRDFLPLAEKARELGRTVLFVAF----PDSTANVIKN 150


>gi|319442042|ref|ZP_07991198.1| hypothetical protein CvarD4_09805 [Corynebacterium variabile DSM
           44702]
          Length = 456

 Score = 73.5 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 63/181 (34%), Gaps = 27/181 (14%)

Query: 6   EKIALFIDGANL---YASSKALGF----DIDYRKLLKAFRS------RAIVIRAYYYTTV 52
           E+  +F+D + L   + +S   G     +ID  +++   +          V R  +Y  +
Sbjct: 3   ERTLVFVDTSYLLASFYNSWETGARSQLEIDLPEVVSVIQRMAVNQLDQPVHRQNWYDGI 62

Query: 53  VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAF--EQS 110
                 ++             G Q+ A    E+    G +R + ++D  L  D      +
Sbjct: 63  PDSGPHRYQRAL-----RSEPGVQLRAGQLIEW----GDRRTQKAVDTRLVADMVKASLT 113

Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
                +++ SGD      V        +V +        SM+S+ LR   D    L   +
Sbjct: 114 GTCSDIILVSGDADMIPGVEEAVDAGVRVHLYGF--GWDSMSSN-LRFACDSTTILDPRE 170

Query: 171 N 171
           +
Sbjct: 171 D 171


>gi|253565602|ref|ZP_04843057.1| cold-shock protein DNA-binding [Bacteroides sp. 3_2_5]
 gi|251945881|gb|EES86288.1| cold-shock protein DNA-binding [Bacteroides sp. 3_2_5]
          Length = 208

 Score = 73.5 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/207 (18%), Positives = 72/207 (34%), Gaps = 25/207 (12%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M +    I +FIDG      ++AL   +     +  F        AY Y       +   
Sbjct: 1   MIESITSIGIFIDGGYFTKINQALEEKLSLNIDITFFFKFIKEKIAYEYNLNTEFCQITE 60

Query: 61  SPL-------------------HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVE 101
           S                         D L  N      K  +E  +      ++  +DV 
Sbjct: 61  SHYFRGRYRVNDANNKHLLFSERKFEDSLIENDVIFHYKHLREIQKEGEINVIEKGIDVW 120

Query: 102 LAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQ 159
            A++A+E S     + +++ +GD     L+  L+       +++  LS  S  +  LR +
Sbjct: 121 FALEAYELSLFRKFDFVILITGDADHEMLIKKLKALKIHTILLTWDLSPESATARLLREE 180

Query: 160 ADYFMDLAYL----KNEIARDPDEDKK 182
           A   ++L+ +    K+ I +     +K
Sbjct: 181 ACKHIELSEIAIEDKDLIKKICRSKQK 207


>gi|330981753|gb|EGH79856.1| hypothetical protein PSYAP_24831 [Pseudomonas syringae pv. aptata
           str. DSM 50252]
          Length = 197

 Score = 73.5 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 29/76 (38%), Gaps = 7/76 (9%)

Query: 94  VKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151
            K++ D+ +AVDA +      ++   + S D  FT LV  L+ + K+V       +    
Sbjct: 7   GKNATDMAMAVDAMDVLFNKPVDVFCLVSSDCDFTPLVMRLRAEGKQVVGFGERKAPEP- 65

Query: 152 ASDQLRRQADYFMDLA 167
                      F+   
Sbjct: 66  ----FVNACSRFLYFD 77


>gi|18978412|ref|NP_579769.1| hypothetical protein PF2040 [Pyrococcus furiosus DSM 3638]
 gi|18894254|gb|AAL82164.1| hypothetical protein PF2040 [Pyrococcus furiosus DSM 3638]
          Length = 183

 Score = 73.5 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 67/179 (37%), Gaps = 32/179 (17%)

Query: 6   EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
           ++IALF+DG N+    K LG  +    +++A      +  A                   
Sbjct: 26  KRIALFVDGPNILR--KELGIHL--EDIVEALSKLGNIRVAKVILNQYAP--------QS 73

Query: 66  LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDG 123
           L++ +   GF+ V               V   + V++AV+A     +  ++ + + + + 
Sbjct: 74  LIEAVSNQGFEPVI--------------VAGEIGVKMAVEAMREVYNPNIDMIALATRNT 119

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182
            F  ++   + K K+  I+          S  L+  ADY + L     +I     ED +
Sbjct: 120 EFVPIILKAKEKGKETAIIGVEHGL----SSALKHAADYVIILKPRGEKIEERHHEDSE 174


>gi|288932625|ref|YP_003436685.1| hypothetical protein Ferp_2286 [Ferroglobus placidus DSM 10642]
 gi|288894873|gb|ADC66410.1| protein of unknown function DUF88 [Ferroglobus placidus DSM 10642]
          Length = 161

 Score = 73.5 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 62/166 (37%), Gaps = 32/166 (19%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
           R+KI + +DG N+        F+++ +++ +   S   V  A  +       +       
Sbjct: 23  RKKIGVLVDGPNM----LRKEFNLNLKEIREILDSYGDVKIAKVFINQYAGEK------- 71

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGD 122
            L++ +   GF+ V                   +DV++AV+A E      ++ L + + D
Sbjct: 72  -LVEAIENQGFEPVV--------------TSGDVDVKMAVEAMEIIYNDSIDVLALVTRD 116

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
             F  ++     K K+  I+          S  L+  AD  + L  
Sbjct: 117 ADFKAVLQKAMEKGKETIIIGAEPGF----SAALKNAADIAICLNE 158


>gi|124265642|ref|YP_001019646.1| hypothetical protein Mpe_A0449 [Methylibium petroleiphilum PM1]
 gi|124258417|gb|ABM93411.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
          Length = 251

 Score = 73.5 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 52/173 (30%), Gaps = 27/173 (15%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M  P  + AL +D  N+         ++    + +   +  ++     Y +V        
Sbjct: 1   MTTPTIRTALLVDADNV-------KVELVAEVIERLQAAGRVLQHRRAYGSV-------- 45

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVI 118
                       +  + +                 ++ D+ LA+DA E    + ++ +V+
Sbjct: 46  QKATEFAALSQDHAIRFL----------PSTFAGPNATDLALAIDAVELVLRQPVDEVVL 95

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
            S D  F  L+  L+    +V                  R  D F  L   + 
Sbjct: 96  VSSDRDFAPLIVRLRELGCRVVGYGQHGKTAQDVERDYLRVYDEFHVLGAARP 148


>gi|300859441|ref|YP_003784424.1| hypothetical protein cpfrc_02024 [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300686895|gb|ADK29817.1| hypothetical protein cpfrc_02024 [Corynebacterium
           pseudotuberculosis FRC41]
 gi|302207120|gb|ADL11462.1| Conserved hypothetical protein [Corynebacterium pseudotuberculosis
           C231]
 gi|302331680|gb|ADL21874.1| Conserved hypothetical protein [Corynebacterium pseudotuberculosis
           1002]
 gi|308277373|gb|ADO27272.1| Conserved hypothetical protein [Corynebacterium pseudotuberculosis
           I19]
          Length = 460

 Score = 73.5 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 62/181 (34%), Gaps = 27/181 (14%)

Query: 6   EKIALFIDGANL---YASSKALGF----DIDYRKLLKAFRS------RAIVIRAYYYTTV 52
           E+  +F+D + L   + +S  +G     +ID  +++    S         V R  +Y  +
Sbjct: 3   ERTQVFVDTSYLLASFYNSWEIGARAQLEIDLPEVVATLGSMIQSQLGQPVHRQLWYDGI 62

Query: 53  VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG 112
                 ++       D     G Q+ A    E+    G +R +  +D  L  D       
Sbjct: 63  PDSGPHRYQRALRTCD-----GVQLRAGQLIEW----GERRTQKGVDTRLVADMVLAGAR 113

Query: 113 --LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
                +V+ SGD      V        +V +        SM+S  LR   D    L   +
Sbjct: 114 REFTDIVLVSGDADMIPGVQEAVNAGVRVHLYGF--GWDSMSS-ALRHCCDSTTILDPRE 170

Query: 171 N 171
           +
Sbjct: 171 D 171


>gi|116754600|ref|YP_843718.1| hypothetical protein Mthe_1300 [Methanosaeta thermophila PT]
 gi|116666051|gb|ABK15078.1| protein of unknown function DUF88 [Methanosaeta thermophila PT]
          Length = 162

 Score = 73.5 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 54/166 (32%), Gaps = 32/166 (19%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
           R+KI L +DG N+        F +D  ++    R    +     +               
Sbjct: 20  RKKIGLLVDGPNM----LRKEFQMDLEEIRNILRDYGDIKVGKVFLN--------QYASE 67

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGD 122
            L++ +   GF+ V                 S +DV +AV+  +      ++ + + + D
Sbjct: 68  KLVEAVENQGFEPVICT--------------SDVDVRMAVEGVDMIYNPVIDTIALVTRD 113

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
                ++       K+  I           S  LR  ADY + L  
Sbjct: 114 ADLKPVLMKAMEHGKETIIFGAEPGF----SVALRNSADYVIVLRN 155


>gi|312115431|ref|YP_004013027.1| hypothetical protein Rvan_2717 [Rhodomicrobium vannielii ATCC
           17100]
 gi|311220560|gb|ADP71928.1| hypothetical protein Rvan_2717 [Rhodomicrobium vannielii ATCC
           17100]
          Length = 626

 Score = 73.5 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 58/180 (32%), Gaps = 31/180 (17%)

Query: 9   ALFIDGANLYASSKAL------GFDIDYRKLLKAFRSRAIVIR--------------AYY 48
           ALF+D  N+Y S +         F  +  + +    +   ++R              A  
Sbjct: 12  ALFVDFDNVYLSLRRQSEEAAGRFARNPAEWMARIATGG-LVRFKSHSDYVRRRFAVARC 70

Query: 49  YTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA-- 106
           Y         +  P  P         F +               + K+  D+++A D   
Sbjct: 71  YGNPGRKLISRGGPHDPHNFADVRVNFMMAGLEVV--DCQPLSNQFKNGTDIKIACDIRD 128

Query: 107 -FEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165
             E        ++ SGD  FT ++  L+   ++  + +         +D  +  +D +++
Sbjct: 129 FLEHPTRFGEFIVLSGDADFTPVLHHLRSHDRRTVVYA-----NESTADIYKAFSDGWIE 183


>gi|192362254|ref|YP_001981906.1| hypothetical protein CJA_1417 [Cellvibrio japonicus Ueda107]
 gi|190688419|gb|ACE86097.1| conserved hypothetical protein [Cellvibrio japonicus Ueda107]
          Length = 178

 Score = 73.5 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 52/160 (32%), Gaps = 22/160 (13%)

Query: 20  SSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVA 79
           +     + +D+ KL +        +R                    L      NGF+V  
Sbjct: 37  NVCDHSWKLDFGKLFQFAGGEKAEVRKAALFGSRPPKNDS------LWVAAQKNGFEVTT 90

Query: 80  KVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGL----EHLVIFSGDGCFTTLVAALQRK 135
                   +      +  +D ++     E S  +    + + + SGD  +   +  L+++
Sbjct: 91  -------YDRNVANAEKKIDTDIVATMIEDSYEILQPGDEVTLVSGDSDYVPAIEKLKKR 143

Query: 136 VKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
              V +V         A+ +L+  A  F +L    + + R
Sbjct: 144 GIAVHVV-----FWKHAARELKEAASTFTELDPYLDHLKR 178


>gi|254417374|ref|ZP_05031116.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
           7420]
 gi|196175809|gb|EDX70831.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
           7420]
          Length = 99

 Score = 73.5 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 4/69 (5%)

Query: 99  DVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRR 158
           DVELA+D  E ++  +  ++ SGDG F   +  +Q+  ++V +VS      +  S +L +
Sbjct: 26  DVELALDLVELADTYDTAILVSGDGDFVPAIERIQQLSRRVEVVS----YRATTSQKLMQ 81

Query: 159 QADYFMDLA 167
            AD +++L 
Sbjct: 82  LADNYLNLE 90


>gi|320008714|gb|ADW03564.1| hypothetical protein Sfla_2131 [Streptomyces flavogriseus ATCC
           33331]
          Length = 303

 Score = 73.5 bits (179), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 60/187 (32%), Gaps = 31/187 (16%)

Query: 9   ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53
           A+F+D   +YA++  L         FD+D   L++AF  +A        ++R Y+Y    
Sbjct: 40  AIFVDAGYVYAAAGLLVTGTEDRRSFDLDAEGLIEAFIDKARTIFADSRLLRVYWYDGAR 99

Query: 54  GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
                        L               K    N      +  +D  +  D    +   
Sbjct: 100 RRIHTVEQQSIAELP------------DVKVRLGNLNANNQQKGVDSLIRTDLESLARHR 147

Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169
            +    +  GD    + V A Q    +V +      +    ++ L  + D     DL + 
Sbjct: 148 AISDAALVGGDEDLVSAVEAAQGYGARVHLWGIEAGEGRNQAEPLLWEVDSQRTFDLDFC 207

Query: 170 KNEIARD 176
           +  + R 
Sbjct: 208 RPYVTRR 214


>gi|254456978|ref|ZP_05070406.1| protein containing DUF88 [Campylobacterales bacterium GD 1]
 gi|207085770|gb|EDZ63054.1| protein containing DUF88 [Campylobacterales bacterium GD 1]
          Length = 257

 Score = 73.1 bits (178), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 51/170 (30%), Gaps = 26/170 (15%)

Query: 1   MFDPREK-IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
           M +  +  IA+FID  N+  SSK +    D             V     Y          
Sbjct: 1   MKNQHKNNIAMFIDCDNV--SSKYIESIFD------DLSQYGTVNIRRAYGDWKDKQLYG 52

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119
           +  +    +           K  ++F    G+     +M +++       ++ LE +V+ 
Sbjct: 53  WENILQDYN----------IKPIQQFAYTKGKNATDIAMIIDIMDIL--YTKDLEAIVLI 100

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
           + D  FT +V  +      V                       F+ +  L
Sbjct: 101 TSDSDFTPIVTRILSDGLTVYGYGEAK-----TPMAFVNACSQFIYVEKL 145


>gi|240103392|ref|YP_002959701.1| hypothetical protein TGAM_1335 [Thermococcus gammatolerans EJ3]
 gi|239910946|gb|ACS33837.1| Conserved hypothetical protein [Thermococcus gammatolerans EJ3]
          Length = 166

 Score = 73.1 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 57/165 (34%), Gaps = 32/165 (19%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
             P++KI L IDG N+        F I    +++A      V  A               
Sbjct: 18  EHPKKKIGLIIDGPNI----LRKEFGIKLEDIIEALNRIGSVRIAKVILNQYAP------ 67

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIF 119
               L++ +   G + V               V    DV +A++  E   +  ++ + + 
Sbjct: 68  --QGLVEAIVNQGLEPVI--------------VAGDTDVRVAIETMEMIYTADVDVIALA 111

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
           S D  F  L+   +R  K+  ++          S  L+  ADY +
Sbjct: 112 SRDADFLPLIIEAKRHGKETVVIGVEPGF----SVALQNAADYVI 152


>gi|237784719|ref|YP_002905424.1| hypothetical protein ckrop_0084 [Corynebacterium kroppenstedtii DSM
           44385]
 gi|237757631|gb|ACR16881.1| hypothetical protein ckrop_0084 [Corynebacterium kroppenstedtii DSM
           44385]
          Length = 639

 Score = 73.1 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 63/181 (34%), Gaps = 27/181 (14%)

Query: 6   EKIALFIDGANL---YASSKALGF----DIDYRKLLKAFRS------RAIVIRAYYYTTV 52
           E+  +F+D + L   + +S   G     +ID  ++               V R  +Y  +
Sbjct: 3   ERTLVFVDTSYLLASFYNSWEEGARTQLEIDLPEVCSVLDRMITQHVGQPVQRQNWYDGI 62

Query: 53  VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS-- 110
                 ++      +D     G Q+ A +  E     G++R + ++D  L  D    +  
Sbjct: 63  PDSGPHRYQRALRTVD-----GVQLRAGLLIE----TGQRRTQKAVDTRLVADMILAAVR 113

Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
           +    +V+ SGD      V        +V +           S+ LR + D    L   +
Sbjct: 114 QQCSDMVLVSGDQDMIPGVVEASAMGVRVHLYGFS---WDSMSNALRHKCDSITVLDPRE 170

Query: 171 N 171
           +
Sbjct: 171 D 171


>gi|229489850|ref|ZP_04383707.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
 gi|229323360|gb|EEN89124.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
          Length = 334

 Score = 73.1 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 58/181 (32%), Gaps = 33/181 (18%)

Query: 10  LFIDGANLYASS--------KALGFDIDYRKLLKAFRSRAIV------IRAYYYTTVVGD 55
           L+ID   L AS+           G  +DY KL+ +  + A V      +R ++Y +    
Sbjct: 7   LYIDAGYLLASAATRVTGTSLRGGIHVDYSKLIGSLLAAAEVKAGLPMLRVHWYDSARNG 66

Query: 56  PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--L 113
                             G        K      G    +  +D+ + +D    +     
Sbjct: 67  IPDAQQ---------ERIGELPK---VKLRLGRFGVNGEQKGVDLRMGLDLVAHARNRAS 114

Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVS--TVLSDPSMASDQLRRQADYFMDLAYLKN 171
           +   + SGD      V   Q    +V +++  TV       S  L R AD    L  +  
Sbjct: 115 DVFFLVSGDDDLAEAVEEAQVHGVQVLLLAVPTVEGKAHGVSRHLIRAADE---LDNIDG 171

Query: 172 E 172
           E
Sbjct: 172 E 172


>gi|89900334|ref|YP_522805.1| hypothetical protein Rfer_1542 [Rhodoferax ferrireducens T118]
 gi|89345071|gb|ABD69274.1| conserved hypothetical protein [Rhodoferax ferrireducens T118]
          Length = 272

 Score = 73.1 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 55/189 (29%), Gaps = 39/189 (20%)

Query: 3   DPREKIALFIDGANLYASSKALGFD-----------------IDYRKLLKAFRSRAIVIR 45
           +  + +AL+ D  NL+AS     F                  +D + +++   S   +  
Sbjct: 7   EENKSVALYWDFENLHASLCEARFGEGAYNKPDGRFKAQEPLVDVQAIVELAASFGPIAI 66

Query: 46  AYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVD 105
              Y          +       D L     +++                K+  D++L +D
Sbjct: 67  NRAYCN--------WQYFGRYRDALLQGAVELIQL-------FSPGASAKNGADIKLCLD 111

Query: 106 AFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162
           A E       +  +VI  GD  F  +   ++   + +  V    S     +         
Sbjct: 112 AVEDISRFGHIGTIVIVGGDSDFMPVSQKIKAAGRTLIGVGARKSTNRHWAKS----CHE 167

Query: 163 FMDLAYLKN 171
           F     L  
Sbjct: 168 FRYYENLVE 176


>gi|15679895|ref|NP_277013.1| hypothetical protein MTH1913 [Methanothermobacter
           thermautotrophicus str. Delta H]
 gi|2623047|gb|AAB86373.1| conserved protein [Methanothermobacter thermautotrophicus str.
           Delta H]
          Length = 173

 Score = 73.1 bits (178), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 57/181 (31%), Gaps = 35/181 (19%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
            + I L +DG N+        F ++   + +       +                     
Sbjct: 23  EKNIGLLVDGPNM----LRKEFSLNLDLVRQIMSEYGNMRVGKV--------LLNQYASD 70

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGD 122
            L++ +   GF  +               V    DV +AV+A E      ++ + + + D
Sbjct: 71  KLIEAIVNQGFTPIV--------------VAWDTDVYMAVEAMELIYNPNIDIIALMTRD 116

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL--AYLKNEIAR-DPDE 179
             F  ++   +   K   ++          S  L+  AD+ + L     +    R  P+E
Sbjct: 117 ADFLPIINKAKENGKDTIVIGAEPGF----SAALQNSADHAIILKPENSRPRKKRATPEE 172

Query: 180 D 180
           D
Sbjct: 173 D 173


>gi|29829642|ref|NP_824276.1| hypothetical protein SAV_3100 [Streptomyces avermitilis MA-4680]
 gi|29606750|dbj|BAC70811.1| hypothetical protein [Streptomyces avermitilis MA-4680]
          Length = 298

 Score = 72.7 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 60/187 (32%), Gaps = 31/187 (16%)

Query: 9   ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53
           A+F+D   LYA++  L         F++D   L++A   +A        ++R Y+Y    
Sbjct: 34  AIFVDAGYLYAAAGRLVAGTEDRRAFELDAEGLIEALIDKARTIFADSRLLRVYWYDGAR 93

Query: 54  GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
                        L               K    N      +  +D  +  D    +   
Sbjct: 94  RRIHTAEQQSIAELP------------DVKVRLGNLNANNQQKGVDSLIRTDLESLARHR 141

Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169
            +    +  GD    + V A Q    +V +      +    ++ L  + D     DL + 
Sbjct: 142 AISDAALLGGDEDLVSAVEAAQGYGARVHLWGIEAPEGRNQAEPLLWEVDSQRTFDLDFF 201

Query: 170 KNEIARD 176
           K  ++R 
Sbjct: 202 KPYVSRR 208


>gi|150021343|ref|YP_001306697.1| hypothetical protein Tmel_1465 [Thermosipho melanesiensis BI429]
 gi|149793864|gb|ABR31312.1| protein of unknown function DUF88 [Thermosipho melanesiensis BI429]
          Length = 188

 Score = 72.7 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 63/176 (35%), Gaps = 15/176 (8%)

Query: 7   KIALFIDGANLYASS-----KALGFDIDYRKLLKAFRS----RAIVIRAYYYTTVVGDPE 57
           +  + +DG  LY S      KA  +D  ++ ++K +         +IR  ++ +   +  
Sbjct: 2   RAIIIVDGNYLYKSCMNEWKKAPKYDFCFQNIIKFYSKVINTEMHLIRVRFHDSPPCEGG 61

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLV 117
                             Q    V        G    +  +DV +A+D    +  ++ ++
Sbjct: 62  DNNFRTKKEKVLNKLRSIQ-RIDVVLGRCRKIGNTFSQKGVDVNMALDIVRYANDIDTII 120

Query: 118 IFSGDGCFTTLVAALQRKVKK-VTIVSTVLSDPSMASDQ----LRRQADYFMDLAY 168
           I SGD          + +  + V ++S    + + ++D+    L   +D++     
Sbjct: 121 IISGDSDLVPAFDEARNRGAEIVLLLSPHHFNSTGSADESIKKLIVASDFYFTFDD 176


>gi|269124499|ref|YP_003297869.1| hypothetical protein Tcur_0226 [Thermomonospora curvata DSM 43183]
 gi|268309457|gb|ACY95831.1| protein of unknown function DUF88 [Thermomonospora curvata DSM
           43183]
          Length = 446

 Score = 72.7 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 61/187 (32%), Gaps = 31/187 (16%)

Query: 5   REKIALFIDGANL-------YASSK-ALGFDIDYRKLLKAFRSRAI------VIRAYYYT 50
            ++ ALF+D   L          ++       D+  LL+   +         ++R Y+Y 
Sbjct: 1   MDRCALFVDAGYLLADGAMAVHGTRHREAVSWDFAGLLQLLSNLGRERTGLPLLRCYWYE 60

Query: 51  TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110
             V                       +      +      R   +  +D E+  D    +
Sbjct: 61  ATVEGRRSPEHEA-------------LADLPGLKLRLGRIRPGRREGVDAEIQRDLMTLA 107

Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL-- 166
               +   V+  GD     +VA  Q    +VT+V   +      S  LR++ D  +++  
Sbjct: 108 RNRAIADAVLVGGDEDMAPVVAEAQEFGVRVTVVHVAVDGNWTISRVLRQECDDLIEIGA 167

Query: 167 AYLKNEI 173
            +L+  +
Sbjct: 168 GHLRPYV 174


>gi|254388917|ref|ZP_05004148.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
           27064]
 gi|197702635|gb|EDY48447.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
           27064]
          Length = 334

 Score = 72.7 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 62/187 (33%), Gaps = 31/187 (16%)

Query: 9   ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53
           A+F+D   +YA++  L         FD+D   +++AF  +A        ++R Y+Y    
Sbjct: 70  AIFVDAGYVYAAAGLLVAGTEDRRAFDLDAEGMIEAFIDKARTIFADSRLLRVYWYDGAR 129

Query: 54  GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
                        L               K    N      +  +D  +  D    +   
Sbjct: 130 RRIHTPEQQSIAELP------------DVKVRLGNLNANNQQKGVDSLIRSDLESLARHR 177

Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169
            +    +  GD    + V A Q    +V +     +D S  ++ L  + D     DL + 
Sbjct: 178 AISDAALVGGDEDLVSAVEAAQGYGARVHLWGIEAADGSNQAEPLLWEVDSQRTFDLDFC 237

Query: 170 KNEIARD 176
           +  I R 
Sbjct: 238 RPYITRR 244


>gi|330955890|gb|EGH56150.1| hypothetical protein PSYCIT7_32171 [Pseudomonas syringae Cit 7]
          Length = 82

 Score = 72.7 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/86 (26%), Positives = 34/86 (39%), Gaps = 6/86 (6%)

Query: 5  REKIALFIDGANLYASSK-ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
           +KIA+F D  NLY + + A G   +Y  L      R  ++ A+ Y    GD     S  
Sbjct: 1  MKKIAVFADVQNLYYTVRQAHGCHFNYAALWADISKRGEIVHAFAYAIDRGD-----SKQ 55

Query: 64 HPLLDWLHYNGFQVVAKVAKEFTENC 89
                L   GF V  K   + ++  
Sbjct: 56 QQFQQILRNLGFTVRLKPYIQRSDGS 81


>gi|212224115|ref|YP_002307351.1| hypothetical protein TON_0966 [Thermococcus onnurineus NA1]
 gi|212009072|gb|ACJ16454.1| hypothetical protein, conserved [Thermococcus onnurineus NA1]
          Length = 170

 Score = 72.7 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 57/163 (34%), Gaps = 32/163 (19%)

Query: 6   EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
           +KIAL IDG N+        F +    ++        +  A                   
Sbjct: 31  KKIALLIDGPNI----LRKEFGVKLEDIVDVLEDIGDLRVAKVILNQYAP--------QG 78

Query: 66  LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDG 123
           L++ +   GF+VV               V     V+LAV+A     +  ++ + + + + 
Sbjct: 79  LIEAVSNQGFEVVV--------------VSGETGVKLAVEAMREIYNPNIDVIALATRNA 124

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
            F  ++   + K K+  ++          S  L+  ADY + L
Sbjct: 125 EFLPVILKAKEKGKETIVIGIEPGF----SAALKHAADYTIIL 163


>gi|297202206|ref|ZP_06919603.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
 gi|297148057|gb|EDY57683.2| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
          Length = 300

 Score = 72.7 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 61/187 (32%), Gaps = 31/187 (16%)

Query: 9   ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53
           A+F+D   LYA++  L         FD+D   L++A   RA        ++R Y+Y    
Sbjct: 37  AIFVDAGYLYAAAGRLVAGTEDRRAFDLDAEGLIEALIDRARTIFADSRLLRVYWYDGAR 96

Query: 54  GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
                        L               K    N      +  +D  +  D    +   
Sbjct: 97  RRIHTTEQQSIAELP------------DVKVRLGNLNANNQQKGVDSLIRSDLESLARHR 144

Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169
            +    +  GD    + V A Q    +V +      +    ++ L  + D    +DL + 
Sbjct: 145 AISDAALLGGDEDLVSAVEAAQGYGARVHLWGIEAPEGRNQAEPLLWEVDSQRTLDLDFF 204

Query: 170 KNEIARD 176
           K  ++R 
Sbjct: 205 KPYVSRR 211


>gi|254173531|ref|ZP_04880203.1| conserved hypothetical protein TIGR00288 [Thermococcus sp. AM4]
 gi|214032223|gb|EEB73053.1| conserved hypothetical protein TIGR00288 [Thermococcus sp. AM4]
          Length = 165

 Score = 72.7 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 58/165 (35%), Gaps = 32/165 (19%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
             P+++I L IDG N+        F I    +++A      V  A               
Sbjct: 17  EQPKKRIGLIIDGPNI----LRKEFGIKLEDIIEALNRIGSVRIAKVILNQYAP------ 66

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIF 119
               L++ +   G + V               V    DV +A++  E   +  ++ + + 
Sbjct: 67  --QGLVEAIVNQGLEPVI--------------VAGDTDVRVAIETMEMIYTADVDVIALA 110

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
           S D  F  L+   +R+ K+  ++          S  L+  ADY +
Sbjct: 111 SRDADFLPLIIEAKRRGKETVVIGVEPGF----SVALQNAADYVI 151


>gi|294814854|ref|ZP_06773497.1| DUF88 domain-containing protein [Streptomyces clavuligerus ATCC
           27064]
 gi|294327453|gb|EFG09096.1| DUF88 domain-containing protein [Streptomyces clavuligerus ATCC
           27064]
          Length = 322

 Score = 72.7 bits (177), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 62/187 (33%), Gaps = 31/187 (16%)

Query: 9   ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53
           A+F+D   +YA++  L         FD+D   +++AF  +A        ++R Y+Y    
Sbjct: 58  AIFVDAGYVYAAAGLLVAGTEDRRAFDLDAEGMIEAFIDKARTIFADSRLLRVYWYDGAR 117

Query: 54  GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
                        L               K    N      +  +D  +  D    +   
Sbjct: 118 RRIHTPEQQSIAELP------------DVKVRLGNLNANNQQKGVDSLIRSDLESLARHR 165

Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169
            +    +  GD    + V A Q    +V +     +D S  ++ L  + D     DL + 
Sbjct: 166 AISDAALVGGDEDLVSAVEAAQGYGARVHLWGIEAADGSNQAEPLLWEVDSQRTFDLDFC 225

Query: 170 KNEIARD 176
           +  I R 
Sbjct: 226 RPYITRR 232


>gi|260579645|ref|ZP_05847514.1| conserved hypothetical protein [Corynebacterium jeikeium ATCC
           43734]
 gi|258602286|gb|EEW15594.1| conserved hypothetical protein [Corynebacterium jeikeium ATCC
           43734]
          Length = 455

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 64/181 (35%), Gaps = 27/181 (14%)

Query: 6   EKIALFIDGANL---YASSKALGF----DIDYRKLLKAFRS------RAIVIRAYYYTTV 52
           E+  +++D + L   + +S   G     +ID  +++           +  V R ++Y  +
Sbjct: 3   ERTQVYVDTSYLLASFYNSWDTGARAQLEIDLPEVVAVLGQMIQDQLKQPVHRQFWYDGI 62

Query: 53  VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS-- 110
                 ++             G Q+ A    E+    G +R + ++D  L  D    +  
Sbjct: 63  PDSGPHRYQRSL-----RSEPGVQLRAGQLIEW----GDRRTQKAVDTRLVADIVIAAMK 113

Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
             +  +V+ SGD      V        +V +        SM+S  LR   D    L   +
Sbjct: 114 RQVSDIVLVSGDADMLPGVEEAVAAGIRVHLYGF--GWDSMSS-ALRFACDTTTILDPRE 170

Query: 171 N 171
           +
Sbjct: 171 D 171


>gi|68535150|ref|YP_249855.1| hypothetical protein jk0087 [Corynebacterium jeikeium K411]
 gi|68262749|emb|CAI36237.1| hypothetical protein jk0087 [Corynebacterium jeikeium K411]
          Length = 451

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 64/181 (35%), Gaps = 27/181 (14%)

Query: 6   EKIALFIDGANL---YASSKALGF----DIDYRKLLKAFRS------RAIVIRAYYYTTV 52
           E+  +++D + L   + +S   G     +ID  +++           +  V R ++Y  +
Sbjct: 3   ERTQVYVDTSYLLASFYNSWDTGARAQLEIDLPEVVAVLGQMIQDQLKQPVHRQFWYDGI 62

Query: 53  VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS-- 110
                 ++             G Q+ A    E+    G +R + ++D  L  D    +  
Sbjct: 63  PDSGPHRYQRSL-----RSEPGVQLRAGQLIEW----GDRRTQKAVDTRLVADIVIAAMK 113

Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
             +  +V+ SGD      V        +V +        SM+S  LR   D    L   +
Sbjct: 114 RQVSDIVLVSGDADMLPGVEEAVAAGIRVHLYGF--GWDSMSS-ALRFACDTTTILDPRE 170

Query: 171 N 171
           +
Sbjct: 171 D 171


>gi|240103393|ref|YP_002959702.1| hypothetical protein TGAM_1336 [Thermococcus gammatolerans EJ3]
 gi|239910947|gb|ACS33838.1| Conserved hypothetical protein [Thermococcus gammatolerans EJ3]
          Length = 169

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 63/169 (37%), Gaps = 32/169 (18%)

Query: 6   EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
           ++IAL IDG N+    K LG  +    L++       +  A                   
Sbjct: 30  KRIALLIDGPNMLR--KELG--VKLEDLVEVLSEIGDIRVAKVVLNQYAP--------QG 77

Query: 66  LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDG 123
           L++ +   GF+ +               V     V+LAV+A +   +  ++ + I + + 
Sbjct: 78  LIEAVSNQGFEPMV--------------VSGETGVKLAVEAMKEIYNPHIDVIAIATRNA 123

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
            F  ++   + K K+  ++          S  L+  ADY + L   K+E
Sbjct: 124 EFLPVILKAKEKGKETIVIGVEPGF----SVALKHAADYAIVLGGEKDE 168


>gi|34496201|ref|NP_900416.1| hypothetical protein CV_0746 [Chromobacterium violaceum ATCC 12472]
 gi|34102055|gb|AAQ58422.1| hypothetical protein CV_0746 [Chromobacterium violaceum ATCC 12472]
          Length = 180

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 63/193 (32%), Gaps = 48/193 (24%)

Query: 10  LFIDGANLYASSKA----------------------LGFDIDYRKLLKAFRSRA--IVIR 45
           ++ID +NLY   +                        G+ I + KL +         + R
Sbjct: 5   IYIDNSNLYIEGRRVSAVQQRLATNINEAMRDGILDHGYTISFGKLHEFLTGGDLTKIKR 64

Query: 46  AYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAV- 104
           A  Y +     +  +             GF++         E+      +  +D  +A  
Sbjct: 65  AALYGSRPPPNDSIWKSA-------ERAGFELHL-------EDRNVANKEKKIDTGIATL 110

Query: 105 ---DAFEQS-EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160
              DA++      +  V+ +GD  +   +  L+    +V +V       S A+ +L+  A
Sbjct: 111 LTKDAYKHGKPEEDLFVLVAGDKDYVPTLNELRADGYQVEVV-----FWSHAAKELKDAA 165

Query: 161 DYFMDLAYLKNEI 173
             F+ L      +
Sbjct: 166 TRFISLDQHLEHL 178


>gi|121604991|ref|YP_982320.1| hypothetical protein Pnap_2090 [Polaromonas naphthalenivorans CJ2]
 gi|120593960|gb|ABM37399.1| conserved hypothetical protein [Polaromonas naphthalenivorans CJ2]
          Length = 268

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 55/188 (29%), Gaps = 38/188 (20%)

Query: 3   DPREKIALFIDGANLYASSKALGFD----------------IDYRKLLKAFRSRAIVIRA 46
           + +  +AL+ D  NL+AS      +                ID + +++   S   +   
Sbjct: 7   ESQPSVALYWDFENLHASLCEARQEGAYSKQDNRFRVQEPLIDIQAVVELAASFGPIAIN 66

Query: 47  YYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA 106
             Y          +       D L     +++                K+  D++L +DA
Sbjct: 67  RAYCN--------WQYFSRYRDALLQCAVELIQL-------FPPGGSAKNGADIKLCLDA 111

Query: 107 FEQSE---GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163
            E       +  ++I  GD  F  +   ++   + +  +    S     +         F
Sbjct: 112 MEDMGRFGHIGTIIIVGGDSDFMPVSQKVKAAGRSLIGIGARKSTNRHWAKS----CHEF 167

Query: 164 MDLAYLKN 171
                L  
Sbjct: 168 RYYENLVE 175


>gi|315231506|ref|YP_004071942.1| hypothetical protein TERMP_01744 [Thermococcus barophilus MP]
 gi|315184534|gb|ADT84719.1| hypothetical protein TERMP_01744 [Thermococcus barophilus MP]
          Length = 175

 Score = 72.4 bits (176), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 56/162 (34%), Gaps = 32/162 (19%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           I L IDG N+        F I    + +A      +  A                   L+
Sbjct: 27  IGLIIDGPNI----LRKEFGIRLEDIKEALERIGKIRVAKVVLNQYAP--------QGLI 74

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCF 125
           + +   GF+ +               V    DV +A++A E      ++ + I + D  F
Sbjct: 75  EAVVNQGFEPII--------------VAGDTDVRIAIEAMELIYNSDVDIIAIATRDADF 120

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
             +++  +RK K+  ++          S  L+  ADY + + 
Sbjct: 121 LPIISEAKRKGKETIVIGVEPGF----SVALQNAADYVIKME 158


>gi|302558564|ref|ZP_07310906.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
 gi|302476182|gb|EFL39275.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
          Length = 305

 Score = 72.4 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 60/187 (32%), Gaps = 31/187 (16%)

Query: 9   ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53
           A+F+D   LYA++  L         FD+D   L+ A   RA        ++R Y+Y    
Sbjct: 42  AIFVDAGYLYAAAGRLVTGTEDRRAFDLDAEGLIDALIDRARTVFADSRLLRVYWYDGAR 101

Query: 54  GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
                        L               K    N      +  +D  +  D    +   
Sbjct: 102 RRIHTAEQQTIAELP------------DVKVRLGNLNANNQQKGVDSLIRSDLESLARHR 149

Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169
            +    +  GD    + V A Q    +V +      +    ++ L  + D    +DL + 
Sbjct: 150 AISDAALLGGDEDLVSAVEAAQGYGARVHLWGIEAPEGRNQAEPLLWEVDSQRTLDLDFF 209

Query: 170 KNEIARD 176
           K  ++R 
Sbjct: 210 KPYVSRR 216


>gi|212224114|ref|YP_002307350.1| hypothetical protein TON_0965 [Thermococcus onnurineus NA1]
 gi|212009071|gb|ACJ16453.1| hypothetical protein, conserved [Thermococcus onnurineus NA1]
          Length = 170

 Score = 72.4 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 54/162 (33%), Gaps = 32/162 (19%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           I L IDG N+        F I    +++A      +  A                   L+
Sbjct: 29  IGLIIDGPNI----LRKEFGIKLEDIVEALERIGKIRVAKVVLNQYAP--------QGLI 76

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEH--LVIFSGDGCF 125
           + +   G + +               V    DV +A++A E     +   + + + D  F
Sbjct: 77  EAVVNQGLEPII--------------VAGDTDVRIAIEAMELIYNSDVEVIALATRDADF 122

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
             ++   +RK K+  ++          S  L+  ADY + + 
Sbjct: 123 LPIINEAKRKGKETIVIGVEPGF----SVALQNAADYVIKME 160


>gi|242398824|ref|YP_002994248.1| hypothetical protein TSIB_0838 [Thermococcus sibiricus MM 739]
 gi|242265217|gb|ACS89899.1| hypothetical protein TSIB_0838 [Thermococcus sibiricus MM 739]
          Length = 187

 Score = 72.4 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 66/182 (36%), Gaps = 35/182 (19%)

Query: 6   EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
           +KIAL IDG N+        F++    ++ A      +  A                   
Sbjct: 34  KKIALLIDGPNI----LRKEFNVHLEDIVAALEELGNIRVAKVVLNQYAP--------QG 81

Query: 66  LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDG 123
           L++ +   GF+ +               V     V+LAV+A     ++ ++ + + + + 
Sbjct: 82  LIEAIANQGFEPII--------------VAGETGVKLAVEAMREIYNQNIDIIALATRNA 127

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL---AYLKNEIARDPDED 180
            F  ++   + K K+  I+          S  L+  ADY + L      +  I +D  + 
Sbjct: 128 EFLPIILKAKEKGKETAIIGIEPGF----SAALKHAADYVIALERGEDNEEIIIQDTKKR 183

Query: 181 KK 182
           +K
Sbjct: 184 RK 185


>gi|302521778|ref|ZP_07274120.1| conserved hypothetical protein [Streptomyces sp. SPB78]
 gi|318062102|ref|ZP_07980823.1| hypothetical protein SSA3_29472 [Streptomyces sp. SA3_actG]
 gi|302430673|gb|EFL02489.1| conserved hypothetical protein [Streptomyces sp. SPB78]
          Length = 310

 Score = 72.4 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 40/194 (20%), Positives = 63/194 (32%), Gaps = 44/194 (22%)

Query: 9   ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRS-------RAIVIRAYYYTTVV 53
           A+F+D   LYA++  L        GF++D + L+ A           + ++R Y+Y    
Sbjct: 33  AIFVDAGYLYAAAGRLVTGTEDRKGFELDAQGLIDALVDCASHVFPHSRLLRVYWYDGAR 92

Query: 54  GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
                        L               K    N      +  +D  +  D    +   
Sbjct: 93  RRIHTAEQQSIAELP------------DVKVRLGNLNANNQQKGVDSLIRGDLESLARHR 140

Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD---------Y 162
            +   V+  GD      V A Q    +V +          A + LR QAD          
Sbjct: 141 AIGDAVLLGGDEDLVPAVEAAQDFGARVHLWGIE------APEGLRNQADPLLWEVDTQR 194

Query: 163 FMDLAYLKNEIARD 176
            +DLA+LK   AR 
Sbjct: 195 TLDLAFLKPYAARR 208


>gi|329939623|ref|ZP_08288924.1| hypothetical protein SGM_4416 [Streptomyces griseoaurantiacus M045]
 gi|329301193|gb|EGG45088.1| hypothetical protein SGM_4416 [Streptomyces griseoaurantiacus M045]
          Length = 302

 Score = 72.4 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 61/187 (32%), Gaps = 31/187 (16%)

Query: 9   ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53
           A+F+D   LYA++  L         FD+D   L++A   +A        ++R Y+Y    
Sbjct: 38  AIFVDAGYLYAAAGRLVAGTEDRRAFDVDAEGLIEALIDKARTIFADSRLLRVYWYDGAR 97

Query: 54  GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
                        L               K    N      +  +D  +  D    +   
Sbjct: 98  RRIHTAEQQSIAELP------------DVKVRLGNLNANNQQKGVDSLIRSDLESLARHR 145

Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169
            +    +  GD    + V A Q    +V +      +    ++ L  + D    +DL + 
Sbjct: 146 AISDAALLGGDEDLVSAVEAAQGYGARVHLWGIEAPEGRNQAEPLLWEVDSQRTLDLDFF 205

Query: 170 KNEIARD 176
           K  ++R 
Sbjct: 206 KPYVSRR 212


>gi|326317506|ref|YP_004235178.1| hypothetical protein Acav_2702 [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|323374342|gb|ADX46611.1| Domain of unknown function DUF88 [Acidovorax avenae subsp. avenae
           ATCC 19860]
          Length = 179

 Score = 72.4 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 70/185 (37%), Gaps = 20/185 (10%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRS--RAIVIRAYYYTTVVGDPEQQFSP 62
            + + + +DGA L+   K+     DY KL           +  +YY  +V        + 
Sbjct: 1   MKTVWI-VDGAYLFNYGKS--RPFDYLKLKNEITRLNGGPIRESYYLNSVSDPATDAQNA 57

Query: 63  LHPLLDWLHYNG--FQVVAKVAKEF------TENCGRKRVKSSMDVELAVDAFEQSEG-- 112
            H  +     +G  F+V     K          +   + V+  +DV +A    + +    
Sbjct: 58  FHSWIKTAPPHGPKFRVQLYKLKRMHMSCAACGHSSDRWVQKGVDVGIATLIIKLAAQNV 117

Query: 113 LEHLVIFSGDGCFTTLVAALQ-RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
            + L++ +GDG F   ++ ++    K+V +  +  S     S  L+  +D  + +  +  
Sbjct: 118 YDRLILSAGDGDFEDAISYVKSELHKEVWVSGSAASL----SPDLQSYSDNVLWMEDMSP 173

Query: 172 EIARD 176
            I R 
Sbjct: 174 TIDRT 178


>gi|326381644|ref|ZP_08203338.1| hypothetical protein SCNU_01805 [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326199891|gb|EGD57071.1| hypothetical protein SCNU_01805 [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 355

 Score = 72.4 bits (176), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 61/200 (30%), Gaps = 35/200 (17%)

Query: 5   REKIALFIDGANLYASS--------KALGFDIDYRKLLKAFRSRAI------VIRAYYYT 50
           R   +L+ID   L AS+           G +++Y +L+      A        +R ++Y 
Sbjct: 33  RPTCSLYIDTGYLLASAATRVTGTSLRNGINVEYSRLIDTLIETAEKLSGLPTLRVHWYD 92

Query: 51  TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110
           +               L               K      G    +  +D+ + +D    +
Sbjct: 93  SADNGVPNPLQQRIGELA------------KVKLRLGRFGVNGEQKGVDLRIGLDLVAHA 140

Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVS--TVLSDPSMASDQLRRQADYFMDL 166
                +   + SGD   T  V   Q    +V +++  T        S  L R AD    +
Sbjct: 141 RNNTSDVFFLVSGDDDLTEAVEEAQVHGVQVILLAVPTADGKSHGVSRHLIRAADDLHRI 200

Query: 167 AYLK-----NEIARDPDEDK 181
             L       ++ R P    
Sbjct: 201 DGLALDESILKVERQPAPKP 220


>gi|330508315|ref|YP_004384743.1| hypothetical protein MCON_2481 [Methanosaeta concilii GP-6]
 gi|328929123|gb|AEB68925.1| conserved hypothetical protein TIGR00288 [Methanosaeta concilii
           GP-6]
          Length = 161

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 54/166 (32%), Gaps = 32/166 (19%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
           R++I L +DG N+        F +D  ++    +    +     +               
Sbjct: 20  RKRIGLLVDGPNM----LRKEFQMDLEEIRDILKDYGDIKMGKVFLN--------QYASE 67

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGD 122
            L++ +   GF+ V                 S +DV +AV+  +      ++ L + + D
Sbjct: 68  KLVEAVENQGFEPVICT--------------SDVDVRMAVEGVDMIYNPVIDTLALVTRD 113

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
                ++       K+  I           S  LR  ADY + L  
Sbjct: 114 ADLKPVLMKAMEHGKETIIFGAEPGF----SVALRNSADYVIVLRD 155


>gi|327401247|ref|YP_004342086.1| hypothetical protein Arcve_1367 [Archaeoglobus veneficus SNP6]
 gi|327316755|gb|AEA47371.1| protein of unknown function DUF88 [Archaeoglobus veneficus SNP6]
          Length = 186

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 58/166 (34%), Gaps = 32/166 (19%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
           R K+ + +DG N+        F+I+ +++ +       +  A  +               
Sbjct: 26  RRKVGVLVDGPNM----LRKEFNINLQEIREILSEYGDIKAAKVFLN--------QYASE 73

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGD 122
            L++ +   GF+ +                   +DV +AV+A E      ++ + + + D
Sbjct: 74  KLVEAIENQGFEPIV--------------TSGDVDVRMAVEAMEMIYNDAIDAIALVTRD 119

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
             F +++       K+  I+          S  L+  AD  + L  
Sbjct: 120 ADFKSVLKKAMEMGKETIIIGAEPGF----SAALKNSADIAIVLNE 161


>gi|284165328|ref|YP_003403607.1| hypothetical protein Htur_2050 [Haloterrigena turkmenica DSM 5511]
 gi|284014983|gb|ADB60934.1| protein of unknown function DUF88 [Haloterrigena turkmenica DSM
           5511]
          Length = 156

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 54/168 (32%), Gaps = 31/168 (18%)

Query: 3   DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
           +    + L +DG N++       FD+D   L  A R    V     Y             
Sbjct: 18  ETEPTVGLLVDGPNVF----RDEFDVDLNDLRDAARDLGRVGVIRLYL--------DEHA 65

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFS 120
              L+      GF+V+                   +DV+LAVDA        ++ L I S
Sbjct: 66  TPGLIQAAEARGFEVIV--------------TSGDVDVKLAVDATALCSDGTIDRLAIGS 111

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
            D  F  ++        +   ++         SD LR  AD  + L  
Sbjct: 112 RDTDFKPVLEYAGTVGVETVAIAPGTYGR---SDALRNAADEAITLGD 156


>gi|304314246|ref|YP_003849393.1| hypothetical protein MTBMA_c04840 [Methanothermobacter marburgensis
           str. Marburg]
 gi|302587705|gb|ADL58080.1| conserved hypothetical protein [Methanothermobacter marburgensis
           str. Marburg]
          Length = 173

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/178 (15%), Positives = 55/178 (30%), Gaps = 35/178 (19%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
            + I L +DG N+        F ++   + K       +                     
Sbjct: 23  EKNIGLLVDGPNM----LRKEFSLNLDLVRKIMSEYGNMRVGKV--------LLNQYASD 70

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGD 122
            L++ +   GF  +               V    DV +AV+A E      ++ + + + D
Sbjct: 71  KLIEAIVNQGFTPIV--------------VAGDTDVYMAVEAMELIYNPNIDIIALMTRD 116

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDED 180
             F  ++   +   K   ++          S  L+  AD+ +    LK E  R    +
Sbjct: 117 ADFLPIINKAKENGKDTIVIGAEPGF----SAALQNSADHAI---ILKPENGRPRKGN 167


>gi|294676826|ref|YP_003577441.1| hypothetical protein RCAP_rcc01279 [Rhodobacter capsulatus SB 1003]
 gi|294475646|gb|ADE85034.1| conserved hypothetical protein [Rhodobacter capsulatus SB 1003]
          Length = 214

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 51/144 (35%), Gaps = 20/144 (13%)

Query: 1   MFDPRE------KIALFIDGANLYASSKALG----FDIDYRKLLKAFRSR--AIVIRAYY 48
           M +  +      + AL+IDG NLY +   LG      + Y +L +    +    ++R  Y
Sbjct: 1   MSEKDQQETRAARAALYIDGFNLYHAIDRLGQPHLKWLSYWRLGQVILPQKTQKLVRVVY 60

Query: 49  YTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKE---FTENCGRKRVK---SSMDVEL 102
            T        +      ++      G +V             +CG +  K    + D+ L
Sbjct: 61  CTAFYPGSAGKRWRHEQVIAAQRAEGVEVALGHYVHERMMCRSCGDRWEKPTEKAGDINL 120

Query: 103 AVDAFEQS--EGLEHLVIFSGDGC 124
           A+     +  +  +H  + + D  
Sbjct: 121 AIHLMHDAFEDVFDHAYLLTADSD 144


>gi|294631254|ref|ZP_06709814.1| conserved hypothetical protein [Streptomyces sp. e14]
 gi|292834587|gb|EFF92936.1| conserved hypothetical protein [Streptomyces sp. e14]
          Length = 305

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 60/187 (32%), Gaps = 31/187 (16%)

Query: 9   ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53
           A+F+D   LYA++  L         FD+D   L+ A   RA        ++R Y+Y    
Sbjct: 41  AIFVDAGYLYAAAGRLVAGTEDRRAFDLDAEGLIDALIDRARTVFADSRLLRVYWYDGAR 100

Query: 54  GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
                        L               K    N      +  +D  +  D    +   
Sbjct: 101 RRIHTAEQQSIAELP------------DVKVRLGNLNANNQQKGVDSLIRSDLESLARHR 148

Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169
            +    +  GD    + V A Q    +V +      +    ++ L  + D    +DL + 
Sbjct: 149 AISDAALLGGDEDLVSAVEAAQGYGARVHLWGIEAPEGRNQAEPLLWEVDSQRTLDLDFF 208

Query: 170 KNEIARD 176
           K  ++R 
Sbjct: 209 KPYVSRR 215


>gi|57640690|ref|YP_183168.1| hypothetical protein TK0755 [Thermococcus kodakarensis KOD1]
 gi|57159014|dbj|BAD84944.1| hypothetical protein, conserved, DUF88 family [Thermococcus
           kodakarensis KOD1]
          Length = 165

 Score = 72.0 bits (175), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 60/163 (36%), Gaps = 32/163 (19%)

Query: 6   EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
           ++IAL IDG N+    K LG  +    + +A      +  A                   
Sbjct: 30  KRIALLIDGPNILR--KELG--VKLEDIAEALSEIGDIRVAKVILNQYAP--------QG 77

Query: 66  LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDG 123
           L++ +   GF+ +               V     V+LAV+A +   +  ++ + + + + 
Sbjct: 78  LIEAVSNQGFEPII--------------VSGETGVKLAVEAMKEIYNPHIDVIALATRNA 123

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
            F  ++   + K K+  ++          S  L+  ADY + L
Sbjct: 124 EFLPVILKAKEKGKETVVIGVEPGF----SVALKHAADYTIIL 162


>gi|315231507|ref|YP_004071943.1| hypothetical protein TERMP_01745 [Thermococcus barophilus MP]
 gi|315184535|gb|ADT84720.1| hypothetical protein TERMP_01745 [Thermococcus barophilus MP]
          Length = 185

 Score = 72.0 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 65/192 (33%), Gaps = 40/192 (20%)

Query: 1   MFDPR---EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
           M       +KIAL IDG N+        F+I    +++A      +  A           
Sbjct: 22  MKRKMRRGKKIALLIDGPNI----LRKEFNIHLEDIVEALEQLGNIRVAKVILNQYAP-- 75

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEH 115
                   L++ +   GF+ +                     V+LAV+A     +  ++ 
Sbjct: 76  ------QGLIEAVANQGFEPIIVP--------------GETGVKLAVEAMREIYNPNIDI 115

Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA- 174
           + + + +  F  ++   + K K+  I+          S  L+  ADY + L     E   
Sbjct: 116 IALATRNAEFLPIILKAKEKGKETVIIGVEPGF----SAALKHGADYVIVLTPRGEESGE 171

Query: 175 ----RDPDEDKK 182
               ++  E +K
Sbjct: 172 RKDIQNSKERRK 183


>gi|14590028|ref|NP_142092.1| hypothetical protein PH0074 [Pyrococcus horikoshii OT3]
 gi|3256460|dbj|BAA29143.1| 163aa long hypothetical protein [Pyrococcus horikoshii OT3]
          Length = 163

 Score = 72.0 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 57/166 (34%), Gaps = 32/166 (19%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           I L IDG N+        F I    + KA      +  A                   L+
Sbjct: 24  IGLIIDGPNI----LRKEFGIKLEDIKKALEKIGKIRVAKVVLNQYAP--------QGLI 71

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCF 125
           + +   GF+ +               V    DV +A++A E      ++ + + + D  F
Sbjct: 72  EAVVNQGFEPII--------------VAGDTDVRVAIEAMELIYNTDVDVIALATRDADF 117

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
             L++  +RK K+  ++          S  L+  ADY + +   K 
Sbjct: 118 LPLISEAKRKGKETVVIGVEPGF----SVALQNAADYIIKMEKKKE 159


>gi|326443231|ref|ZP_08217965.1| hypothetical protein SclaA2_19298 [Streptomyces clavuligerus ATCC
           27064]
          Length = 303

 Score = 72.0 bits (175), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 62/187 (33%), Gaps = 31/187 (16%)

Query: 9   ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53
           A+F+D   +YA++  L         FD+D   +++AF  +A        ++R Y+Y    
Sbjct: 39  AIFVDAGYVYAAAGLLVAGTEDRRAFDLDAEGMIEAFIDKARTIFADSRLLRVYWYDGAR 98

Query: 54  GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
                        L               K    N      +  +D  +  D    +   
Sbjct: 99  RRIHTPEQQSIAELP------------DVKVRLGNLNANNQQKGVDSLIRSDLESLARHR 146

Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169
            +    +  GD    + V A Q    +V +     +D S  ++ L  + D     DL + 
Sbjct: 147 AISDAALVGGDEDLVSAVEAAQGYGARVHLWGIEAADGSNQAEPLLWEVDSQRTFDLDFC 206

Query: 170 KNEIARD 176
           +  I R 
Sbjct: 207 RPYITRR 213


>gi|120611183|ref|YP_970861.1| hypothetical protein Aave_2514 [Acidovorax citrulli AAC00-1]
 gi|120589647|gb|ABM33087.1| protein of unknown function DUF88 [Acidovorax citrulli AAC00-1]
          Length = 179

 Score = 71.6 bits (174), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 71/184 (38%), Gaps = 20/184 (10%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRS--RAIVIRAYYYTTVVGDPEQQFSP 62
            + + + IDGA L+   K+     DY KL           +  +YY  +V        + 
Sbjct: 1   MKTVWI-IDGAYLFNYGKS--KPFDYLKLKNEITRLNGGPIRESYYLNSVSDPATDAQNA 57

Query: 63  LHPLLDWLHYNG--FQVVAKVAKEF------TENCGRKRVKSSMDVELAVDAFEQSEG-- 112
            H  +     +G  F+V     K+         +   + V+  +DV +A    + +    
Sbjct: 58  FHSWIKTAPPHGPKFRVQLYKLKKMHMNCAACGHSSDRWVQKGVDVGIATLIIKLAAQNV 117

Query: 113 LEHLVIFSGDGCFTTLVAALQ-RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKN 171
            + L++ +GDG F   ++ ++    K+V +  +  S     S  L+  +D  + +  +  
Sbjct: 118 YDRLILSAGDGDFEDAISYVKSELHKEVWVSGSAASL----SPDLQSYSDNVLWMEDMSP 173

Query: 172 EIAR 175
            I R
Sbjct: 174 TIDR 177


>gi|156602934|ref|XP_001618742.1| hypothetical protein NEMVEDRAFT_v1g224852 [Nematostella vectensis]
 gi|156200154|gb|EDO26642.1| predicted protein [Nematostella vectensis]
          Length = 343

 Score = 71.6 bits (174), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 21/148 (14%), Positives = 46/148 (31%), Gaps = 24/148 (16%)

Query: 34  LKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKR 93
           +        +        ++ D  +  +    ++D  H  G +  +K+            
Sbjct: 132 IHEALENGELDILIGTHALLEDKVKFRNLGFAIIDEQHRFGVEQRSKL-----------W 180

Query: 94  VKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMAS 153
            K +MD+         S  +    + S D  FT L   L+    +V  +    +      
Sbjct: 181 KKDAMDIL-------YSGKVTGFCLVSSDSDFTRLATRLREAGMEVIGIGEKKTPHP--- 230

Query: 154 DQLRRQADYFMDLAYLKNE-IARDPDED 180
                  D F+ +  LK E + ++  + 
Sbjct: 231 --FIVACDKFIYIEILKKETVEKNDQKQ 256


>gi|318080774|ref|ZP_07988106.1| hypothetical protein SSA3_29788 [Streptomyces sp. SA3_actF]
          Length = 302

 Score = 71.6 bits (174), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 37/188 (19%), Positives = 61/188 (32%), Gaps = 32/188 (17%)

Query: 9   ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRS-------RAIVIRAYYYTTVV 53
           A+F+D   LYA++  L        GF++D + L+ A           + ++R Y+Y    
Sbjct: 33  AIFVDAGYLYAAAGRLVTGTEDRKGFELDAQGLIDALVDCASHVFPHSRLLRVYWYDGAR 92

Query: 54  GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
                        L               K    N      +  +D  +  D    +   
Sbjct: 93  RRIHTAEQQSIAELP------------DVKVRLGNLNANNQQKGVDSLIRGDLESLARHR 140

Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVS-TVLSDPSMASDQLRRQAD--YFMDLAY 168
            +   V+  GD      V A Q    +V +            +D L  + D    +DLA+
Sbjct: 141 AIGDAVLLGGDEDLVPAVEAAQDFGARVHLWGIEAPEGLRNQADPLLWEVDTQRTLDLAF 200

Query: 169 LKNEIARD 176
           LK   AR 
Sbjct: 201 LKPYAARR 208


>gi|290957576|ref|YP_003488758.1| hypothetical protein SCAB_30991 [Streptomyces scabiei 87.22]
 gi|260647102|emb|CBG70201.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
          Length = 301

 Score = 71.6 bits (174), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 58/187 (31%), Gaps = 31/187 (16%)

Query: 9   ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53
           A+F+D   LYA+   L         FD+D   L+ A   +A        ++R Y+Y    
Sbjct: 37  AIFVDAGYLYAAVGRLAAGTEDRRSFDLDAEGLIDALIDKARTIFADSRLLRVYWYDGAR 96

Query: 54  GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
                        L               K    N      +  +D  +  D    +   
Sbjct: 97  RRIHTAEQQSIAELP------------DVKVRLGNLNANNQQKGVDSLIRTDLESLARHR 144

Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169
            +    +  GD    + V A Q    +V +      +    ++ L  + D     DL + 
Sbjct: 145 AISDAALIGGDEDLVSAVEAAQGYGARVHLWGIEAPEGRNQAEPLLWEVDSQRTFDLDFF 204

Query: 170 KNEIARD 176
           K  ++R 
Sbjct: 205 KPYVSRR 211


>gi|254173701|ref|ZP_04880373.1| conserved hypothetical protein TIGR00288 [Thermococcus sp. AM4]
 gi|214032393|gb|EEB73223.1| conserved hypothetical protein TIGR00288 [Thermococcus sp. AM4]
          Length = 169

 Score = 71.6 bits (174), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 63/169 (37%), Gaps = 32/169 (18%)

Query: 6   EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
           ++IAL IDG N+    K LG  +    L++       +  A                   
Sbjct: 30  KRIALLIDGPNMLR--KELG--VKLEDLVEVLSEIGDIRVAKVVLNQYAP--------QG 77

Query: 66  LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDG 123
           L++ +   GF+ +               V     V+LAV+A +   +  ++ + I + + 
Sbjct: 78  LIEAVSNQGFEPMI--------------VSGETGVKLAVEAMKEIYNPHIDVIAIATRNA 123

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
            F  ++   + K K+  ++          S  L+  ADY + L   ++E
Sbjct: 124 EFLPVILKAKEKGKETVVIGVEPGF----SVALKHAADYAIVLGGEEDE 168


>gi|187940199|gb|ACD39327.1| hypothetical protein PACL_0668 [Pseudomonas aeruginosa]
          Length = 274

 Score = 71.2 bits (173), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 51/161 (31%), Gaps = 30/161 (18%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           ++A+ +D  N+                L+       V+    Y           +  H  
Sbjct: 11  RVAVLVDCDNVSPDILEHA--------LRVVAQFGRVVLRRGYGN-------HATLSHRW 55

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124
            + L    F        ++    G    K++ D+ LA+DA E       +   + + D  
Sbjct: 56  QETLVRQAFT----PCLQYQYAAG----KNTSDIALALDALEALFDSRADTFCLVTSDSD 107

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165
           F  L   L+ +   V IV           D LR  +D F +
Sbjct: 108 FAYLCRKLRERGAMVCIVGE-----PKTPDALRNSSDQFFE 143


>gi|330509013|ref|YP_004385441.1| hypothetical protein MCON_3373 [Methanosaeta concilii GP-6]
 gi|328929821|gb|AEB69623.1| conserved hypothetical protein [Methanosaeta concilii GP-6]
          Length = 184

 Score = 71.2 bits (173), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 58/179 (32%), Gaps = 13/179 (7%)

Query: 6   EKIALFIDGANLYASSKAL--GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
           ++ A+FIDGA L            ID  +           +R YYY  +           
Sbjct: 10  DRAAVFIDGAYLTKILDVDFGKPKIDLARFSDILCGNYERLRTYYYNCMPYQSCPSTDEE 69

Query: 64  HPLLDWLHYNGFQVVAKVAKE----FTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLV 117
                 +    + +      E         G + V+  +D+ LA D    S    +   V
Sbjct: 70  SRRFASMDKFVYTLRKLPRFEVKLGRLGRVGGEFVQKRVDIALAADLVRLSCGRMIGKAV 129

Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA-YLKNEIAR 175
           I +GD  F   + A +     VT+        S   D+L    D    +   L + +AR
Sbjct: 130 IVTGDSDFLPAIEAAKDAGVLVTLFY----SESSIHDELLSAVDERTPIDQDLIDLVAR 184


>gi|110668763|ref|YP_658574.1| hypothetical protein HQ2865A [Haloquadratum walsbyi DSM 16790]
 gi|109626510|emb|CAJ52972.1| conserved hypothetical protein [Haloquadratum walsbyi DSM 16790]
          Length = 219

 Score = 70.8 bits (172), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 61/181 (33%), Gaps = 33/181 (18%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
                 + LF+DG N+        FD+D   +  A            Y            
Sbjct: 9   EQSNRSVGLFVDGPNV----LREEFDVDLDDVRTAAEQFGRPAIRRLYL--------DEH 56

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIF 119
               L+      GF+V+                 + +DV L+VD  + +  +  + + I 
Sbjct: 57  APSGLIQAAESRGFEVIV--------------TSTDVDVRLSVDLTKAAVTDTADIIAIV 102

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
           S D  F   + A     ++  +++  ++     SD LR  AD  + L    +   ++  +
Sbjct: 103 SRDADFKPAIEAANSHDRRTVVIAPGVNGR---SDALRNAADTQITLGE--DNQEKNQSK 157

Query: 180 D 180
           D
Sbjct: 158 D 158


>gi|187939647|gb|ACD38790.1| conserved hypothetical protein [Pseudomonas aeruginosa]
 gi|187939724|gb|ACD38865.1| hypothetical protein PACL_0607 [Pseudomonas aeruginosa]
          Length = 286

 Score = 70.8 bits (172), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 24/180 (13%), Positives = 52/180 (28%), Gaps = 31/180 (17%)

Query: 5   REKIALFIDGANLYASS---------KALGFDIDYRKLLKAF-------RSRAIVIRAYY 48
             ++ +F+D   L+A           +     ++   ++               ++R Y+
Sbjct: 1   MNRLGIFVDAGYLFAQGSTAIAGNPERRTNLSLNEEAVVTQLLETAADLSGGTPLLRIYW 60

Query: 49  YTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE 108
           Y  +                          +   K           +  +D  + +D  E
Sbjct: 61  YDAIGDRGPTLEQKRLA------------SSNNVKVRMGTLNGSGQQKGVDSMIVIDMIE 108

Query: 109 QSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTV-LSDPSMASDQLRRQADYFMD 165
            +    +   V+ SGD      V   Q    +V ++      D S  S  L ++AD   +
Sbjct: 109 LARNHAIADAVLLSGDEDVRVGVQFAQSYGVRVHLIGIANEHDNSHQSLSLIQEADTHTE 168


>gi|242398823|ref|YP_002994247.1| hypothetical protein TSIB_0837 [Thermococcus sibiricus MM 739]
 gi|242265216|gb|ACS89898.1| hypothetical protein TSIB_0837 [Thermococcus sibiricus MM 739]
          Length = 174

 Score = 70.8 bits (172), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 56/171 (32%), Gaps = 32/171 (18%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
           P + I L IDG N+        F I    + +A      +  A                 
Sbjct: 28  PPKTIGLIIDGPNI----LRKEFGIKLENIKEALEKIGNIRVAKVVLNQYAP-------- 75

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLE--HLVIFSG 121
             L++ +   GF+ +               V    DV +A++A E     +   +   + 
Sbjct: 76  QGLIEAVVNQGFEPII--------------VAGDTDVRIAIEAMELIYNSDIEVIGFATR 121

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
           D  F  ++   +RK K+  ++          S  L+  ADY + +     E
Sbjct: 122 DADFLPIINEGKRKGKETVVIGVEPGF----SVALQNAADYVIRMEGKSEE 168


>gi|325960103|ref|YP_004291569.1| hypothetical protein Metbo_2384 [Methanobacterium sp. AL-21]
 gi|325331535|gb|ADZ10597.1| protein of unknown function DUF88 [Methanobacterium sp. AL-21]
          Length = 165

 Score = 70.8 bits (172), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 53/165 (32%), Gaps = 32/165 (19%)

Query: 6   EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
           + I L +DG N+        FD D   +         V     +                
Sbjct: 24  KNIGLLVDGPNM----LRKEFDCDLEIVRDLMLEHGNVKVGKVFLN--------QYASDK 71

Query: 66  LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDG 123
           L++ +   GF  +               V    DV++A++AFE      ++ + + + D 
Sbjct: 72  LIEAVVNQGFSPMI--------------VSGETDVQMAIEAFELIHNPNIDIIALMTRDV 117

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
            F  L+   +   K+  ++          S  L+  AD  + L  
Sbjct: 118 DFFPLINVAKENGKQTIVIGAEPGF----SAALKNSADDTITLKN 158


>gi|307331746|ref|ZP_07610850.1| conserved hypothetical protein [Streptomyces violaceusniger Tu
           4113]
 gi|306882612|gb|EFN13694.1| conserved hypothetical protein [Streptomyces violaceusniger Tu
           4113]
          Length = 305

 Score = 70.8 bits (172), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 61/187 (32%), Gaps = 31/187 (16%)

Query: 9   ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53
           A+F+D   +YA++  L         F++D   L++AF  +A        ++R Y++    
Sbjct: 37  AIFVDAGYVYAAAGRLVAGTEDRRAFELDAEGLIEAFIDKARTIFPDSRLLRVYWFDGAR 96

Query: 54  GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
                        L               K    N      +  +D  +  D    +   
Sbjct: 97  RRIHTPEQQSIAELP------------DVKVRLGNLNANNQQKGVDSLIRSDLESLARHR 144

Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169
            +   V+  GD    + V A Q    +V +      D    ++ L  + D     DL + 
Sbjct: 145 AIGDAVLIGGDEDLVSAVEAAQGYGARVHLWGIEALDGRNQAEPLLWEVDSQRTFDLDFC 204

Query: 170 KNEIARD 176
           K  + R 
Sbjct: 205 KPYVTRR 211


>gi|25029366|ref|NP_739420.1| hypothetical protein CE2810 [Corynebacterium efficiens YS-314]
 gi|259508454|ref|ZP_05751354.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
 gi|23494654|dbj|BAC19620.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
 gi|259164008|gb|EEW48562.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
          Length = 422

 Score = 70.8 bits (172), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 62/181 (34%), Gaps = 27/181 (14%)

Query: 6   EKIALFIDGANL---YASSKALGF----DIDYRKLLKAFRS------RAIVIRAYYYTTV 52
           E+  +F+D + L   + +S   G     +ID  +++           +  V R  +Y  +
Sbjct: 3   ERTQVFVDTSYLLASFYNSWETGARAQLEIDLPEVVGVLGRMIEQQLKQPVQRQMWYDGI 62

Query: 53  VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS-- 110
                 ++       D     G Q+ A    E+    G +R + ++D  L  D       
Sbjct: 63  PDSGPHRYQRALRTCD-----GVQLRAGQLIEW----GERRTQKAVDTRLVADLVLAGVR 113

Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
                +V+ SGD      V        +V +        SM+S  LR   D    L   +
Sbjct: 114 GQCSDIVLVSGDADMIPGVQEATNAGVRVHLYGF--GWDSMSSQ-LRHCCDTTTILDPRE 170

Query: 171 N 171
           +
Sbjct: 171 D 171


>gi|282895638|ref|ZP_06303763.1| Protein of unknown function DUF88 [Raphidiopsis brookii D9]
 gi|281199332|gb|EFA74197.1| Protein of unknown function DUF88 [Raphidiopsis brookii D9]
          Length = 156

 Score = 70.8 bits (172), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 6/100 (6%)

Query: 1   MFD--PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58
           M D   R ++A+FIDG NL+ ++  +G +IDY KLL      + ++RA++YT V    E+
Sbjct: 50  MSDDLNRGRVAIFIDGLNLFHAALQIGIEIDYVKLLCRLTQTSRLLRAFFYTGVDTSKEK 109

Query: 59  QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSM 98
           Q       L W+  NG++VV K     TEN  + + +   
Sbjct: 110 Q----QGFLLWMRRNGYRVVTKDIIALTENGKKPKSQCGN 145


>gi|14590027|ref|NP_142091.1| hypothetical protein PH0073 [Pyrococcus horikoshii OT3]
 gi|3256459|dbj|BAA29142.1| 195aa long hypothetical protein [Pyrococcus horikoshii OT3]
          Length = 195

 Score = 70.4 bits (171), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 67/173 (38%), Gaps = 33/173 (19%)

Query: 6   EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
           ++IAL +DG N+    K LG  +    +++A  S   +  A                   
Sbjct: 29  KRIALLVDGPNILR--KELGVHL--EDIVEALSSLGNIRVAKVILNQYAP--------QS 76

Query: 66  LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDG 123
           L++ +   GF+ V               V   + V+LAV+A     +  ++ + + + + 
Sbjct: 77  LIEAVSNQGFEPVI--------------VAGEIGVKLAVEAMREVYNPNIDIIALATRNT 122

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
            F  ++   + K K+  I+          S  L+  ADY + L   + E++ +
Sbjct: 123 EFVPIILKAKEKGKETAIIGVEPGF----SSALKHAADYVIVLES-RGELSEE 170


>gi|57640691|ref|YP_183169.1| hypothetical protein TK0756 [Thermococcus kodakarensis KOD1]
 gi|57159015|dbj|BAD84945.1| hypothetical protein, conserved, DUF88 family [Thermococcus
           kodakarensis KOD1]
          Length = 166

 Score = 70.4 bits (171), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 61/177 (34%), Gaps = 38/177 (21%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           I L IDG N+        F I    +L+A +    V  A                   L+
Sbjct: 25  IGLIIDGPNI----LRKEFGIKLEDILEALKRIGNVRVAKVILNQYAP--------QGLI 72

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCF 125
           + +   G + V               V    DV +A++A E      ++ + + S D  F
Sbjct: 73  EAVVNQGLEPVI--------------VAGDTDVRVAIEAMELIYNSDVDVIALASRDADF 118

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182
             ++   +R+ K+  ++          S  L+  ADY + +        R   E+K+
Sbjct: 119 LPIIIEAKRRGKETVVIGVDPGF----SVALQNAADYVIKME------GRKTPENKE 165


>gi|333024585|ref|ZP_08452649.1| hypothetical protein STTU_2089 [Streptomyces sp. Tu6071]
 gi|332744437|gb|EGJ74878.1| hypothetical protein STTU_2089 [Streptomyces sp. Tu6071]
          Length = 310

 Score = 70.4 bits (171), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 62/194 (31%), Gaps = 44/194 (22%)

Query: 9   ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRS-------RAIVIRAYYYTTVV 53
           A+F+D   LYA++  L        GF++D + L+ A           + ++R Y+Y    
Sbjct: 33  AIFVDAGYLYAAAGRLVTGTEDRKGFELDAQGLIDALVDCASHVFPHSRLLRVYWYDGAR 92

Query: 54  GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
                        L               K    N      +  +D  +  D    +   
Sbjct: 93  RRIHTAEQQSIAELP------------DVKVRLGNLNANNQQKGVDSLIRGDLESLARHR 140

Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD---------Y 162
            +   V+  GD      V A Q    +V +          A + LR QAD          
Sbjct: 141 AIGDAVLLGGDEDLVPAVEAAQDFGARVHLWGIE------APEGLRNQADPLLWEVDTQR 194

Query: 163 FMDLAYLKNEIARD 176
            +DLA+LK    R 
Sbjct: 195 TLDLAFLKPYAVRR 208


>gi|239817540|ref|YP_002946450.1| hypothetical protein Vapar_4578 [Variovorax paradoxus S110]
 gi|239804117|gb|ACS21184.1| protein of unknown function DUF88 [Variovorax paradoxus S110]
          Length = 527

 Score = 70.4 bits (171), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 67/190 (35%), Gaps = 27/190 (14%)

Query: 7   KIALFIDGANLYASSKAL------GFDIDYRKLLKAFRSRAIVIRA-----YYYTTVVGD 55
           KIALF+D  N+Y+  + +       F     + L    + A               +V  
Sbjct: 2   KIALFVDFDNVYSGLRRISAEAAERFSRQPLRWLSWLTTGADGENIDDTSRDRRRVLVRR 61

Query: 56  PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EG 112
                          H  GF++V                K+S D+ L +D  +       
Sbjct: 62  CYLNPVMYQKYRRPFHEAGFEIVDCPPM-------TATGKTSTDIHLVLDTMDALLDDTH 114

Query: 113 LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL-AYLKN 171
            +  ++FS D  F+ ++  L+R  ++  + +         S+  +  AD  +D+  +L +
Sbjct: 115 FDEFIVFSADADFSPVLRRLRRHDRRTVVFA-----AGAMSESYKASADRVIDIQTFLHD 169

Query: 172 EIARDPDEDK 181
            +     ED+
Sbjct: 170 ALELPSAEDE 179


>gi|313681102|ref|YP_004058841.1| hypothetical protein Ocepr_2220 [Oceanithermus profundus DSM 14977]
 gi|313153817|gb|ADR37668.1| hypothetical protein Ocepr_2220 [Oceanithermus profundus DSM 14977]
          Length = 242

 Score = 70.4 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 59/185 (31%), Gaps = 26/185 (14%)

Query: 2   FDPREKIALFIDGANLYASS--KALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGD---P 56
            D   ++ +++DG N Y  +  +     +++ KL K    +  ++   Y+T  V +    
Sbjct: 25  TDSVSRLIVYVDGFNFYYGAVKQTPYKWLNFNKLFKILFPKDDLVLVRYFTARVKNNPLN 84

Query: 57  EQQFSPLHPLLDWLH-------YNGF---QVVAKVAKEFTENCGR--KRVKSSMDVELAV 104
             Q       L  L        + GF     V            R  K  +   DV LA 
Sbjct: 85  PGQRERQGTYLRALRTLPDFEIHEGFFLSHPVNMPVAPPGTGFARVLKFEEKGSDVNLAT 144

Query: 105 DAFEQS--EGLEHLVIFSGDGCFTTLVAALQRK-VKKVTIVST------VLSDPSMASDQ 155
                +  +  +  V+ S D      +  +  +  K V +V                S  
Sbjct: 145 YLMLDAIEDRFDTAVVVSHDSDLALPIQIVNERLGKPVGVVGYDPRFQRKYGKRPRTSKS 204

Query: 156 LRRQA 160
           LR+ A
Sbjct: 205 LRKVA 209


>gi|15790568|ref|NP_280392.1| hypothetical protein VNG1608C [Halobacterium sp. NRC-1]
 gi|10581082|gb|AAG19872.1| conserved hypothetical protein [Halobacterium sp. NRC-1]
          Length = 187

 Score = 70.4 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/157 (21%), Positives = 54/157 (34%), Gaps = 31/157 (19%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           +ALF+DG N+        FD+D   + +       +     Y               PL+
Sbjct: 52  VALFVDGPNV----LRDEFDVDLDDVREIAGEVGPLAVTRLYL--------DEHATPPLI 99

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCF 125
                 G+ V                    +DV+LAVDA E    +G++ L + S D  F
Sbjct: 100 QAGEARGYDVRV--------------TSGDVDVKLAVDATELVLDDGVDVLAVASRDTDF 145

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162
             +    +R+  +   ++         SD LR  A  
Sbjct: 146 KPVFEQAERRGVRTLAIAPGEHGR---SDALRNAATD 179


>gi|14520298|ref|NP_125773.1| hypothetical protein PAB0042 [Pyrococcus abyssi GE5]
 gi|5457513|emb|CAB49004.1| Conserved archaebacterial protein, DUF88 family [Pyrococcus abyssi
           GE5]
          Length = 191

 Score = 70.4 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 61/163 (37%), Gaps = 32/163 (19%)

Query: 6   EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
           ++IAL +DG N+    K LG  +    +++A      +  A                   
Sbjct: 26  KRIALLVDGPNILR--KELGVHL--EDIVEALSDLGNIRVAKVILNQYAP--------QS 73

Query: 66  LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDG 123
           L++ +   GF+ V               V   + V+LAV+A     +  ++ + + + + 
Sbjct: 74  LIEAVSNQGFEPVI--------------VAGEIGVKLAVEAMREVYNPNIDIIALATRNT 119

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
            F  ++   + K K+  I+          S  L+  ADY + L
Sbjct: 120 EFVPIILKAKEKGKETAIIGVEPGF----SSALKHAADYVIVL 158


>gi|145296960|ref|YP_001139781.1| hypothetical protein cgR_2860 [Corynebacterium glutamicum R]
 gi|140846880|dbj|BAF55879.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 472

 Score = 70.4 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 62/184 (33%), Gaps = 27/184 (14%)

Query: 6   EKIALFIDGANL---YASSKALGF----DIDYRKLLKAFRS------RAIVIRAYYYTTV 52
           E+  +F+D + L   + +S   G     +ID  +++           +  V R  +Y  +
Sbjct: 3   ERTQVFVDTSYLLASFYNSWETGARAQLEIDLPEVVGVLGRMIEQQLKQPVQRQMWYDGI 62

Query: 53  VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS-- 110
                 ++       D     G Q+ A    E+    G +R + ++D  L  D       
Sbjct: 63  PDSGPHRYQRALRTCD-----GVQLRAGQLIEW----GERRTQKAVDTRLVADLVLAGVR 113

Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
                +V+ SGD      V        +V +        SM+S  LR   D    L   +
Sbjct: 114 GQCSDIVLVSGDADMIPGVQEAANAGLRVHLYGF--GWDSMSSQ-LRHCCDTTTILDPRE 170

Query: 171 NEIA 174
           +   
Sbjct: 171 DFAE 174


>gi|23308996|ref|NP_602135.2| hypothetical protein NCgl2847 [Corynebacterium glutamicum ATCC
           13032]
 gi|62391787|ref|YP_227189.1| hypothetical protein cg3263 [Corynebacterium glutamicum ATCC 13032]
 gi|21325721|dbj|BAC00342.1| Hypothetical protein [Corynebacterium glutamicum ATCC 13032]
 gi|41327129|emb|CAF20973.1| conserved hypothetical protein [Corynebacterium glutamicum ATCC
           13032]
          Length = 472

 Score = 70.4 bits (171), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 62/184 (33%), Gaps = 27/184 (14%)

Query: 6   EKIALFIDGANL---YASSKALGF----DIDYRKLLKAFRS------RAIVIRAYYYTTV 52
           E+  +F+D + L   + +S   G     +ID  +++           +  V R  +Y  +
Sbjct: 3   ERTQVFVDTSYLLASFYNSWETGARAQLEIDLPEVVGVLGRMIEQQLKQPVQRQMWYDGI 62

Query: 53  VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS-- 110
                 ++       D     G Q+ A    E+    G +R + ++D  L  D       
Sbjct: 63  PDSGPHRYQRALRTCD-----GVQLRAGQLIEW----GERRTQKAVDTRLVADLVLAGVR 113

Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
                +V+ SGD      V        +V +        SM+S  LR   D    L   +
Sbjct: 114 GQCSDIVLVSGDADMIPGVQEAANAGLRVHLYGF--GWDSMSSQ-LRHCCDTTTILDPRE 170

Query: 171 NEIA 174
           +   
Sbjct: 171 DFAE 174


>gi|89896708|ref|YP_520195.1| hypothetical protein DSY3962 [Desulfitobacterium hafniense Y51]
 gi|89336156|dbj|BAE85751.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 274

 Score = 70.0 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 55/163 (33%), Gaps = 9/163 (5%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
            + IA FID  N++      G+++    L+++ +  A       Y          F    
Sbjct: 1   MKAIA-FIDYENIWTGLFEQGYELTPEILMESIQLYAKQND---YVLSAIYLYANFDREE 56

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ----SEGLEHLVIFS 120
                  +    V  +              +++ DVEL ++A E     +   +   + +
Sbjct: 57  FWRAQTSFEKIHVYTRHVYGKNNFASTGLRRNAADVELILEAQEILLTRTATFDVFFLLT 116

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163
           GDG F  L+  ++   K V ++  V               D+F
Sbjct: 117 GDGDFLPLLRKVRAWGKDVKVIG-VKGSMHHELQAFSDSGDFF 158


>gi|149913234|ref|ZP_01901768.1| hypothetical protein RAZWK3B_04560 [Roseobacter sp. AzwK-3b]
 gi|149813640|gb|EDM73466.1| hypothetical protein RAZWK3B_04560 [Roseobacter sp. AzwK-3b]
          Length = 225

 Score = 70.0 bits (170), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 57/168 (33%), Gaps = 40/168 (23%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M  P   +++ +DG N+  S K  G      K+L              Y           
Sbjct: 1   MAQP---VSVLVDGDNI--SGKHAG------KILSVAAQHGEPTLVRVYADAQRPS---- 45

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVI 118
                  DW    G++++                K++ D+ LA+DA E    + +   VI
Sbjct: 46  -------DWHSAIGYRML-----------HSGTGKNAADILLALDALELLLAKNMRCFVI 87

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
            S DG FT L   L+    KV  +  V +         R     F+++
Sbjct: 88  ASSDGDFTHLATRLREHGAKVIGIGEVKAP-----SAFRACCSDFVEI 130


>gi|260885342|ref|ZP_05896875.1| conserved hypothetical protein [Prevotella tannerae ATCC 51259]
 gi|260852796|gb|EEX72665.1| conserved hypothetical protein [Prevotella tannerae ATCC 51259]
          Length = 166

 Score = 69.7 bits (169), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 19/132 (14%), Positives = 35/132 (26%), Gaps = 21/132 (15%)

Query: 34  LKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKR 93
           +    S    I    Y        +++              F         +        
Sbjct: 1   MSFVSSYGNPIIRRIYADWTKSAMKRWK--------EEAKTFSFRLVEVLSYVG------ 46

Query: 94  VKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151
           VK++ D+ L +DA +      ++   I S D  +T L   ++ K   V            
Sbjct: 47  VKNTTDMALVIDAMDLLHGKTVQGFCIVSSDSDYTLLAQRIREKGLLVLGYGEQK----- 101

Query: 152 ASDQLRRQADYF 163
               L+     F
Sbjct: 102 TPASLQNSCHEF 113


>gi|319791586|ref|YP_004153226.1| hypothetical protein Varpa_0897 [Variovorax paradoxus EPS]
 gi|315594049|gb|ADU35115.1| protein of unknown function DUF88 [Variovorax paradoxus EPS]
          Length = 273

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 55/140 (39%), Gaps = 26/140 (18%)

Query: 6   EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
           + +A+FID  NL  ++      +D+  L     +  ++ R  Y          +   L  
Sbjct: 13  KNLAVFIDADNLNDAT-----ALDHVLLALRPMADRVIYRRAY---------GRPESLKA 58

Query: 66  LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDG 123
           +   L  +G + VA +             K++ D  L +DA E   +  ++ + I SGD 
Sbjct: 59  IHAVLWRHGVRPVANLIV----------DKTTTDSALVIDAVEAVCTNDIDIVAICSGDA 108

Query: 124 CFTTLVAALQRKVKKVTIVS 143
            F  L   L+ K  +V   S
Sbjct: 109 DFVPLALWLREKGCRVLCYS 128


>gi|114764533|ref|ZP_01443758.1| hypothetical protein 1100011001295_R2601_11629 [Pelagibaca
          bermudensis HTCC2601]
 gi|114543100|gb|EAU46119.1| hypothetical protein R2601_11629 [Roseovarius sp. HTCC2601]
          Length = 60

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/59 (52%), Positives = 45/59 (76%)

Query: 1  MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
          MF   E++ALFIDG+NLYA++KALGFDIDY+ L + F  R  ++RA+YYT ++ + E +
Sbjct: 1  MFYKDERLALFIDGSNLYAAAKALGFDIDYKLLRQEFVRRGKMVRAFYYTALLENDEYR 59


>gi|219667461|ref|YP_002457896.1| hypothetical protein Dhaf_1404 [Desulfitobacterium hafniense DCB-2]
 gi|219537721|gb|ACL19460.1| protein of unknown function DUF88 [Desulfitobacterium hafniense
           DCB-2]
          Length = 296

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 53/157 (33%), Gaps = 8/157 (5%)

Query: 11  FIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWL 70
           FID  N++      G+++    L+++ +  A       Y          F          
Sbjct: 28  FIDYENIWTGLFEQGYELTPEILMESIQLYAKQND---YVLSAIYLYANFDREEFWRAQT 84

Query: 71  HYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ----SEGLEHLVIFSGDGCFT 126
            +    V  +              +++ DVEL ++A E     +   +  ++ +GDG F 
Sbjct: 85  SFEKIHVYTRHVYGKNNFASTGLRRNAADVELILEAQEILLTRTATFDVFLLLTGDGDFL 144

Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163
            L+  ++   K V ++  V               D+F
Sbjct: 145 PLLRKVRAWGKDVKVIG-VKGSMHHELQAFSDSGDFF 180


>gi|87303496|ref|ZP_01086279.1| hypothetical protein WH5701_09555 [Synechococcus sp. WH 5701]
 gi|87281909|gb|EAQ73872.1| hypothetical protein WH5701_09555 [Synechococcus sp. WH 5701]
          Length = 132

 Score = 69.7 bits (169), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 7/77 (9%)

Query: 100 VELAVDAFE--QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLR 157
           V L +DA +   S  ++   + S D   T L A ++     V       +     +    
Sbjct: 19  VALIIDAMDLLHSGRVDGFWLVSSDNDVTRLAARIRAAGLAVYAFGEKKTPKPFVA---- 74

Query: 158 RQADYFMDLAYLKNEIA 174
              D F+D   L+  ++
Sbjct: 75  -ACDKFIDTEILRKALS 90


>gi|297563529|ref|YP_003682503.1| hypothetical protein Ndas_4611 [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296847977|gb|ADH69997.1| protein of unknown function DUF88 [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 574

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/187 (19%), Positives = 65/187 (34%), Gaps = 31/187 (16%)

Query: 5   REKIALFIDGANLYA--------SSKALGFDIDYRKLLKAFRSRAI------VIRAYYYT 50
            ++ ALF+D   L A        +        DY  L++     A       ++R Y+Y 
Sbjct: 1   MDRCALFVDAGYLLADGAMAVHGTRNRDSVSWDYTGLVQFLNEVARDRTGLPLLRCYWYE 60

Query: 51  TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110
            V  D   Q                 +      +F     R   +  ++  +  D    +
Sbjct: 61  AVADDRRTQEQDG-------------IADIPGIKFRGARIRPGRREGVESYVQRDLTTLA 107

Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL-- 166
               L   V+ SGD     +VA +Q    +VT+V   +      S  LRR+ D  +++  
Sbjct: 108 RTGVLCDAVLVSGDEDMAPVVADVQDMGVRVTVVHVSVEGNWTISRALRRECDDLIEIGA 167

Query: 167 AYLKNEI 173
            +L+  +
Sbjct: 168 GHLRPHV 174


>gi|291453992|ref|ZP_06593382.1| conserved hypothetical protein [Streptomyces albus J1074]
 gi|291356941|gb|EFE83843.1| conserved hypothetical protein [Streptomyces albus J1074]
          Length = 317

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 61/191 (31%), Gaps = 31/191 (16%)

Query: 9   ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53
           A+F+D   LYA++  L         FD+D   L+ A   RA        ++R Y+Y    
Sbjct: 52  AVFVDAGYLYAAAGRLVTGTEERGAFDLDAEGLIDALIDRARQIFADSRLLRVYWYDGAR 111

Query: 54  GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
                        L               K    N      +  +D  +  D    +   
Sbjct: 112 RRIHTAEQLAIAALP------------DVKVRLGNLNANNQQKGVDSLIRGDLESLARHR 159

Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169
            +   V+  GD    + V + Q    +V +      +    +D L  + D    +DLA+ 
Sbjct: 160 AISDAVLIGGDEDLVSAVESAQGHGARVHLWGIEAPEGRNQADPLLWEVDTQRTLDLAFF 219

Query: 170 KNEIARDPDED 180
           +  + R     
Sbjct: 220 QPYLTRRATTP 230


>gi|94265587|ref|ZP_01289332.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93453916|gb|EAT04271.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
          Length = 207

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 68/194 (35%), Gaps = 23/194 (11%)

Query: 7   KIALFIDGANLYASSKA--LGFDIDYRKLLK-AFRSRAIVIRAYYYTTVVGD--PEQQFS 61
           + +++IDG NLY  +        +D R+++    +    + +  Y+T +V       Q +
Sbjct: 2   RTSVYIDGFNLYYRALKGTPHKWLDLRQMVANLLQPHHQITQLKYFTAIVSGIFDPSQPN 61

Query: 62  PLHPLLDWLHYN--GFQVVAKVA-------------KEFTENCGRKRVKSSMDVELAVDA 106
                +  L ++   F V                  +  +     K  +   DV LA+  
Sbjct: 62  RQKSYIRALKHHIPNFSVHYGHFLSHEVFAPKAPLTRPPSFTRVIKTEEKGSDVNLAIHL 121

Query: 107 FEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
              +  +  +  ++ S D      +  ++ +  KV  +          S +L++ A +  
Sbjct: 122 LNDAWLDRYDCAIVISNDSDLVEPLRLVREQNGKVIGL-ISPLLRGHPSRELQKHAHFVK 180

Query: 165 DLAYLKNEIARDPD 178
            +      +++ P 
Sbjct: 181 RIREGVLRVSQLPS 194


>gi|224000195|ref|XP_002289770.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220974978|gb|EED93307.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 735

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 67/206 (32%), Gaps = 33/206 (16%)

Query: 7   KIALFIDGANLYASS-----------------KALGFDIDYRKLLKAFRSRAIVIRAYYY 49
           K  LFIDG  LY S                      + +D+  L +    +    R    
Sbjct: 162 KAMLFIDGTWLYYSLHARNANRCPIVPRFGQGWQSNYKVDWLALPRLICEQIDKQRNSQT 221

Query: 50  TTVVGDPEQQFSPLHPLLDWLHYNGFQ-VVAKVAKEFTENCGRKR-------VKSSMDVE 101
           +    D   + S +              +  ++ +E +               +  +D++
Sbjct: 222 SFKGSDRPLEISRVMVFTSAKKETDPNSIRMRMFREMSNANYDVHMMETVGQGEKCVDIQ 281

Query: 102 LAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS--MASDQL 156
           LAV+    +      +  ++ +GD  F   +   ++K K+V I S           S  +
Sbjct: 282 LAVEMLHYATVPNAYDVAILLTGDKDFVPALVRTRQKGKQVVICSMKTGCNRVLYESPHI 341

Query: 157 RRQADYFMDLAYLKNEIARD-PDEDK 181
           R      + L    +E+    P+E++
Sbjct: 342 RDY--NVVWLEDCLDELIVPIPEEER 365


>gi|262182985|ref|ZP_06042406.1| hypothetical protein CaurA7_03252 [Corynebacterium aurimucosum ATCC
           700975]
          Length = 362

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 44/134 (32%), Gaps = 14/134 (10%)

Query: 40  RAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMD 99
              + R Y+Y  +      ++     + D     G Q+      E+    G +R + ++D
Sbjct: 7   GNRIHRQYWYDGIPDTGPHRYQRALRVCD-----GVQLRTGQLIEW----GERRTQKAVD 57

Query: 100 VELAVDAF--EQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLR 157
             L  D         +   V+ SGD      V        +V +        SM+S  LR
Sbjct: 58  TRLVADMIVSAMKGQVTDFVLVSGDADMIPGVQEAVNNGVRVHLYGF--GWDSMSS-ALR 114

Query: 158 RQADYFMDLAYLKN 171
              D    L   ++
Sbjct: 115 HACDSTTILDPRED 128


>gi|237751560|ref|ZP_04582040.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879]
 gi|229372926|gb|EEO23317.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879]
          Length = 248

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 53/161 (32%), Gaps = 30/161 (18%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           IA+  D  N+ ++            +L+  +    V+  Y +                  
Sbjct: 2   IAILFDCENVSST--------HIPFILQRLKRFGKVVLKYAFKDWSRQS----------- 42

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDGCF 125
           DW      +      + F      K  K++ D+++   A++      +EH+ I S D  F
Sbjct: 43  DWTQQVVEEYGMIPIQVFR----HKNFKNTSDLKIQASAYKILYESNIEHICIVSSDSDF 98

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
             +   +Q K K       +        + L+    +F+ L
Sbjct: 99  RDIALEIQAKGKISIGFGEMK-----TPESLQNAYTHFIHL 134


>gi|218529118|ref|YP_002419934.1| hypothetical protein Mchl_1107 [Methylobacterium chloromethanicum
           CM4]
 gi|218521421|gb|ACK82006.1| conserved hypothetical protein [Methylobacterium chloromethanicum
           CM4]
          Length = 246

 Score = 69.3 bits (168), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 65/187 (34%), Gaps = 17/187 (9%)

Query: 4   PREKIALFIDGANLYASSKALGFDI----DYRKLLKAFRSRA--IVIRAYYYTTVVGDPE 57
            R + AL+IDG NLY S   LG       ++ KL ++   R    ++R  + T       
Sbjct: 10  SRIRAALYIDGFNLYHSVNDLGESFLKWCNFWKLGESIIPRQSEELVRVVFCTAYYPGDH 69

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVA-----KEFTENCGR-KRVKSSMDVELAVDAFEQS- 110
            +      L+  L   G + +         K         K  + + D+ LA+  ++ + 
Sbjct: 70  SKKIRHERLVRALKLVGVETILGHFSKEDAKCRDCGSAWQKPTEKATDINLALSVYDDAV 129

Query: 111 -EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
            + ++   + + D           ++  K  +VS      + +   L         +A  
Sbjct: 130 QDAMDTAYLLTADTDQAATAELFAKRFPKKKLVSVSPPGRTHSQHILSHTPHK---IALN 186

Query: 170 KNEIARD 176
           +  I R 
Sbjct: 187 REHIERA 193


>gi|32455334|ref|NP_862346.1| hypothetical protein pHel5_14 [Helicobacter pylori]
 gi|20502866|gb|AAM22673.1|AF469113_13 unknown [Helicobacter pylori]
          Length = 197

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 54/185 (29%), Gaps = 28/185 (15%)

Query: 2   FDPREKIALFIDGANLYASS-----KALGFDIDYRKLLKAFRSRA--------------I 42
            +  +K A+F+D  NL         K      DY    +                     
Sbjct: 1   MNHTQKTAIFVDFENLRIGVFDKTWKKKRLFFDYNNNPQKVVDFCNLCVFDSYHDKDLLN 60

Query: 43  VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQ-VVAKVAKEFTENCGRKRVKSSMDVE 101
           + R ++YT    D   +   +   L  L       +      +     G   V+  +D+ 
Sbjct: 61  LYRIFFYTAKPLDSHSKKKDILNFLSTLECLNHTALRLGKLVKR----GDVEVQKQVDML 116

Query: 102 LAVDAFE--QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQ 159
           L +D  E      +E +V+   D   +  +   +    +  I+             L + 
Sbjct: 117 LGIDMLEISLKHFVEKVVLIGYDSDMSPALKLARTNGIQTEIILFED-LKQKIEPSLTKH 175

Query: 160 ADYFM 164
            D F+
Sbjct: 176 CD-FI 179


>gi|239982145|ref|ZP_04704669.1| hypothetical protein SalbJ_22130 [Streptomyces albus J1074]
          Length = 302

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 61/191 (31%), Gaps = 31/191 (16%)

Query: 9   ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53
           A+F+D   LYA++  L         FD+D   L+ A   RA        ++R Y+Y    
Sbjct: 37  AVFVDAGYLYAAAGRLVTGTEERGAFDLDAEGLIDALIDRARQIFADSRLLRVYWYDGAR 96

Query: 54  GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
                        L               K    N      +  +D  +  D    +   
Sbjct: 97  RRIHTAEQLAIAALP------------DVKVRLGNLNANNQQKGVDSLIRGDLESLARHR 144

Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169
            +   V+  GD    + V + Q    +V +      +    +D L  + D    +DLA+ 
Sbjct: 145 AISDAVLIGGDEDLVSAVESAQGHGARVHLWGIEAPEGRNQADPLLWEVDTQRTLDLAFF 204

Query: 170 KNEIARDPDED 180
           +  + R     
Sbjct: 205 QPYLTRRATTP 215


>gi|302542712|ref|ZP_07295054.1| conserved hypothetical protein [Streptomyces hygroscopicus ATCC
           53653]
 gi|302460330|gb|EFL23423.1| conserved hypothetical protein [Streptomyces himastatinicus ATCC
           53653]
          Length = 309

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 61/187 (32%), Gaps = 31/187 (16%)

Query: 9   ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRAI-------VIRAYYYTTVV 53
           A+F+D   +YA++  L         F++D   +++AF  +A        ++R Y++    
Sbjct: 41  AIFVDAGYVYAAAGRLVAGTEDRRAFELDAEGIIEAFIDKARMIFPDSRLLRVYWFDGAR 100

Query: 54  GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
                        L               K    N      +  +D  +  D    +   
Sbjct: 101 RRIHTPEQQSIAELP------------DVKVRLGNLNANNQQKGVDSLIRSDLESLARHR 148

Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD--YFMDLAYL 169
            +   V+  GD    + V A Q    +V +      D    ++ L  + D     DL + 
Sbjct: 149 AIGDAVLIGGDEDLVSAVEAAQGYGARVHLWGIEALDGRNQAEPLLWEVDSQRTFDLDFC 208

Query: 170 KNEIARD 176
           K  + R 
Sbjct: 209 KPYVTRR 215


>gi|317011853|gb|ADU85599.1| hypothetical protein HPSA_08374 [Helicobacter pylori SouthAfrica7]
          Length = 193

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 62/198 (31%), Gaps = 31/198 (15%)

Query: 2   FDPREKIALFIDGANLYASS-----KALGFDIDYRKLLKAFRSRA--------------I 42
            +  +K A+F+D  NL         K      DY    +                     
Sbjct: 1   MNHTQKTAIFVDFENLRIGVFNKTWKKKRLFFDYNNNPQKVVDFCNLCVFDSYHDKDLLN 60

Query: 43  VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQ-VVAKVAKEFTENCGRKRVKSSMDVE 101
           + R ++YT    D   +   +   L  L       +      +     G   V+  +D+ 
Sbjct: 61  LYRIFFYTAKPLDSHSKKEDILKFLSTLECLNHTALRLGKLVKR----GDVEVQKQVDML 116

Query: 102 LAVDAFE--QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQ 159
           L +D  E      +E +V+   D   +  +   +    +  I+     +  + S  L + 
Sbjct: 117 LGIDMLEISLKHFVEKVVLIGYDSDMSPALKLARTNGIQTEIILFEDLEQKIES-SLTKH 175

Query: 160 ADYFMD---LAYLKNEIA 174
            D F+    +  + N++ 
Sbjct: 176 CD-FIKKVRIEDIYNKLG 192


>gi|33329851|gb|AAQ10302.1| hypothetical protein [Gram-negative bacterium 0471]
          Length = 126

 Score = 68.5 bits (166), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 48/150 (32%), Gaps = 27/150 (18%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            +     A+ +DG N   S         Y+ +L+    +  +   + Y        + + 
Sbjct: 1   MNSTLNFAVLVDGENAQPS--------KYQDILREVSQKGNIASKWVYADWTNPTHKSWK 52

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVI 118
            +            +  +   ++F         K + D  L +DA E    S+ +  + I
Sbjct: 53  DIM----------LETGSAPKQQFHY------CKDAADHALIMDAIELICTSDKINAICI 96

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSD 148
            S DG F  L   +  K   V  V    + 
Sbjct: 97  VSSDGGFAGLAQRISEKGLHVMAVGKKDTP 126


>gi|148359486|ref|YP_001250693.1| hypothetical protein LPC_1394 [Legionella pneumophila str. Corby]
 gi|148281259|gb|ABQ55347.1| hypothetical protein LPC_1394 [Legionella pneumophila str. Corby]
          Length = 211

 Score = 68.5 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 62/183 (33%), Gaps = 23/183 (12%)

Query: 4   PREKIALFIDGANLYASS--KALGFDIDYRKL-LKAFRSRAIVIRAYYYTTV---VGDPE 57
             ++  ++IDG NLY     +     +D + L +    S   + +  YYT         E
Sbjct: 2   NNKRTTIYIDGFNLYYGCLKRTSYKWLDLKALFINLLESSHNIQKIKYYTAPISSRDGNE 61

Query: 58  QQFSPLHPLLDW------------LHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVELAV 104
                    L               HY   +V AKV     +     K  +   DV LA+
Sbjct: 62  ASRFRQKYYLQALESYIPEIEIYYGHYLTHEVSAKVVNPPPDFIKIYKTEEKGSDVNLAL 121

Query: 105 DAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLS-DPSMASDQLRRQAD 161
                +  +  +  VI S D      +  ++ +  K+  V    +      S +L + AD
Sbjct: 122 HVLNDAWLDAYDCAVIVSNDSDLAESLRLVKSQTNKLIGVVFPNTDHKRRPSRELAKYAD 181

Query: 162 YFM 164
            F+
Sbjct: 182 -FI 183


>gi|239813864|ref|YP_002942774.1| hypothetical protein Vapar_0855 [Variovorax paradoxus S110]
 gi|239800441|gb|ACS17508.1| protein of unknown function DUF88 [Variovorax paradoxus S110]
          Length = 272

 Score = 68.5 bits (166), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/140 (22%), Positives = 55/140 (39%), Gaps = 26/140 (18%)

Query: 6   EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
           + +A+FID  NL  ++      +D+  L     +  I+ R  Y          +   L  
Sbjct: 13  KSMAVFIDADNLNDAT-----ALDHVLLALRSMADRILYRRAY---------GRPESLKS 58

Query: 66  LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDG 123
           +   L  +G + VA +             K++ D  L +DA E   +  ++ + I SGD 
Sbjct: 59  IHAVLWRHGVRPVANLIV----------DKTTTDSALVIDAVEAVCTNDIDIVAICSGDA 108

Query: 124 CFTTLVAALQRKVKKVTIVS 143
            F  L   L+ K  +V   S
Sbjct: 109 DFVPLAIWLREKGCRVLCYS 128


>gi|332158254|ref|YP_004423533.1| hypothetical protein PNA2_0613 [Pyrococcus sp. NA2]
 gi|331033717|gb|AEC51529.1| hypothetical protein PNA2_0613 [Pyrococcus sp. NA2]
          Length = 194

 Score = 68.1 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 67/188 (35%), Gaps = 41/188 (21%)

Query: 6   EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
           ++IAL +DG N+    K LG  +    +++A      +  A                   
Sbjct: 26  KRIALLVDGPNILR--KELGIHL--EDIVEALSKLGNIRVAKVILNQYAP--------QS 73

Query: 66  LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDG 123
           L++ +   GF+ V               V   + V+LAV+A     +  ++ L + + + 
Sbjct: 74  LIEAVSNQGFEPVI--------------VAGEIGVKLAVEAMREVYNPNIDILALATRNT 119

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA---------YLKNEIA 174
            F  ++   + K K+  I+          S  L+  ADY + L            K+   
Sbjct: 120 EFVPIILKAKEKGKETAIIGVEPGF----SSALKHAADYVIILEPRGEVSEERDFKDIEE 175

Query: 175 RDPDEDKK 182
           RD    ++
Sbjct: 176 RDGRRKER 183


>gi|171315862|ref|ZP_02905092.1| protein of unknown function DUF88 [Burkholderia ambifaria MEX-5]
 gi|171098958|gb|EDT43746.1| protein of unknown function DUF88 [Burkholderia ambifaria MEX-5]
          Length = 131

 Score = 68.1 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 5/116 (4%)

Query: 25  GFDIDYRKLLKAFRSRA-IVIRAYYYTTVVGDPEQQ----FSPLHPLLDWLHYNGFQVVA 79
           G  + Y  L          + R + Y +       +     + +      L   GF+V  
Sbjct: 6   GHLMRYEVLRSLAGRAGATIQRLHAYLSFDERRAARSPDYDARIKGYQAALRDKGFRVTI 65

Query: 80  KVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRK 135
           K  + + +  G + VKS+ D+ +A+DA  +S+ L+ ++I + DG F  +V ALQ+K
Sbjct: 66  KPLRHYADEDGTETVKSNSDLGMAIDALSESDRLDTVLIATSDGDFVEVVRALQKK 121


>gi|84497148|ref|ZP_00995970.1| hypothetical protein JNB_13178 [Janibacter sp. HTCC2649]
 gi|84382036|gb|EAP97918.1| hypothetical protein JNB_13178 [Janibacter sp. HTCC2649]
          Length = 386

 Score = 68.1 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 58/172 (33%), Gaps = 28/172 (16%)

Query: 8   IALFIDGANLYASS--------KALGFDIDYRKLLKAFRSRAI------VIRAYYYTTVV 53
            A+++D   L AS+           G ++DY  L+    ++        ++R  +Y +  
Sbjct: 5   CAVYVDVGYLLASAATRVTGSSLRSGIEVDYPGLIAGLVAQVEADSGLPLLRVNWYDSGA 64

Query: 54  GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SE 111
               Q               G     K+        G    +  +DV L +D   Q  + 
Sbjct: 65  RSGGQPDYHQ-------DQIGLLPRIKLRLGRLSYAG---EQKGVDVRLGLDLALQGRAR 114

Query: 112 GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTV--LSDPSMASDQLRRQAD 161
             + + + SGD   T  V   Q    +V ++S           S  LRR AD
Sbjct: 115 VADVVYLVSGDDDLTEAVEEAQSAGVQVVLLSVPGLNGHGHAVSKHLRRAAD 166


>gi|219128471|ref|XP_002184436.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217404237|gb|EEC44185.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 779

 Score = 68.1 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 57/189 (30%), Gaps = 57/189 (30%)

Query: 7   KIALFIDGANLYASS-----------KALGF----DIDY------RKLLKAFRSRA---- 41
           K  LFIDG  LY S            +  G       D+      R L ++ R       
Sbjct: 223 KAMLFIDGTWLYYSIYERTEARCPIIQRYGRGWQNRYDFHWAALPRILCESLRDPGWSTN 282

Query: 42  --------------------IVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKV 81
                                ++RA  +T+   D            D    N + V    
Sbjct: 283 TAAPAHTTTHESATKNARPMEIVRASVFTSYKADTPTSSFRYQMFQDMQAAN-YDVHMME 341

Query: 82  AKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKK 138
                        +  +D++LAV+    +      +  ++ +GD  F   +   ++K +K
Sbjct: 342 TVGR--------GEKCVDIQLAVEMMHYATVPNAYDVALLLTGDKDFMPAMIRTRQKARK 393

Query: 139 VTIVSTVLS 147
           V +VS    
Sbjct: 394 VGLVSMKTG 402


>gi|284038322|ref|YP_003388252.1| hypothetical protein Slin_3445 [Spirosoma linguale DSM 74]
 gi|283817615|gb|ADB39453.1| protein of unknown function DUF88 [Spirosoma linguale DSM 74]
          Length = 338

 Score = 68.1 bits (165), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 67/202 (33%), Gaps = 36/202 (17%)

Query: 7   KIALFIDGANLYASSKALGF------DIDYRKLLKAFRSR-----------AIVIRAYYY 49
           +I +F DG      S    +       I    L    R +             ++ A+Y+
Sbjct: 9   RIGVFYDGNYFLHVSNYYNYSHERRSRISISGLHAFIRRQVAEEEGVNERLCQIVDAHYF 68

Query: 50  TTVVGDPEQQFSPLHPLLD-----WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAV 104
              +   E          D      L   G        K +       R +  +DV LA+
Sbjct: 69  RGRLNAHEANQRGNQLFYDRLFDDILMSEGVVTHYLPVKTYQG----YRQEKGIDVWLAL 124

Query: 105 DAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS--------TVLSDPSMASD 154
           +AFE ++    + +V+ + DG +  L+  L     ++ ++S              +  S 
Sbjct: 125 EAFELAQYKKFDVVVLITSDGDYVPLIRKLNTLGSRIMVLSWDFEFLNEQGEKQVTRTSQ 184

Query: 155 QLRRQADYFMDLAYLKNEIARD 176
            L  +  Y + +  L ++ +R 
Sbjct: 185 DLLEEVSYPVGMHGLIDDRSRR 206


>gi|320538110|ref|ZP_08038007.1| hypothetical protein HMPREF9554_02765 [Treponema phagedenis F0421]
 gi|320145044|gb|EFW36763.1| hypothetical protein HMPREF9554_02765 [Treponema phagedenis F0421]
          Length = 323

 Score = 68.1 bits (165), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 24/168 (14%), Positives = 51/168 (30%), Gaps = 32/168 (19%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
            +  AL IDG N+  S + L        ++        +     Y          +  L 
Sbjct: 2   EKNYALLIDGDNI--SPRYL------EAIVNEVSKEGEIQIKRIYGDWTTVNMNGWKSLL 53

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHL---VIFSG 121
                      ++  +  ++F          ++ D  + ++A E +   +++    I S 
Sbjct: 54  A----------KIPVRPVQQFRYG------DNATDNTIIMEAIELANNNKNINAICIVST 97

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
           D  + +L   L+     V  +    +     S       + F  L  L
Sbjct: 98  DADYYSLALKLREYGLYVLGIGRSNAKDIWVS-----SCNEFKYLENL 140


>gi|218248953|ref|YP_002374324.1| hypothetical protein PCC8801_4244 [Cyanothece sp. PCC 8801]
 gi|257062039|ref|YP_003139927.1| hypothetical protein Cyan8802_4306 [Cyanothece sp. PCC 8802]
 gi|218169431|gb|ACK68168.1| protein of unknown function DUF88 [Cyanothece sp. PCC 8801]
 gi|256592205|gb|ACV03092.1| protein of unknown function DUF88 [Cyanothece sp. PCC 8802]
          Length = 299

 Score = 67.7 bits (164), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 61/167 (36%), Gaps = 28/167 (16%)

Query: 1   MFDPRE--KIALFIDGANLYASSKALGFD------IDYRKLLKAFRSR-----------A 41
           M   ++  +I +F DG      S    ++      +    L +  R +            
Sbjct: 1   MTQDQKLTRIGIFYDGNYFLHVSNYYNYNHERKARVSIPGLHEFIRHQVAKEEGVDVRLC 60

Query: 42  IVIRAYYYTTVVGDPEQQFSPL---HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSM 98
            ++ A+Y+   +   E   + L       D L   G        +      G K  +  +
Sbjct: 61  QIVDAHYFRGRLSAGEASRNQLYYDRVFDDILMSEGVITHYLPLR----TWGGKMEEKGI 116

Query: 99  DVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS 143
           DV LA++AFE +  +    LV+ + DG +  LV  L     +V ++S
Sbjct: 117 DVWLALEAFELAFYKRFSVLVLIACDGDYVPLVRKLNTLGTRVMVLS 163


>gi|188583320|ref|YP_001926765.1| hypothetical protein Mpop_4114 [Methylobacterium populi BJ001]
 gi|179346818|gb|ACB82230.1| hypothetical protein Mpop_4114 [Methylobacterium populi BJ001]
          Length = 246

 Score = 67.7 bits (164), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 52/135 (38%), Gaps = 14/135 (10%)

Query: 4   PREKIALFIDGANLYASSKALGFDI----DYRKLLKAFRSRA--IVIRAYYYTTVVGDPE 57
            R + AL+IDG NLY S   LG       ++ KL ++  SR    ++R  + T       
Sbjct: 10  SRIRAALYIDGFNLYHSVNDLGEPFLKWCNFWKLGESIISRQSEELVRVVFCTAYYPGDH 69

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVA-----KEFTENCGR-KRVKSSMDVELAVDAFEQS- 110
            +      L+  L   G + V         K         K  + + D+ LA+  ++ + 
Sbjct: 70  SKKIRHERLVRALKLVGVETVLGHFSHEDAKCRDCGSTWQKPTEKATDINLALSVYDDAV 129

Query: 111 -EGLEHLVIFSGDGC 124
            + ++   + + D  
Sbjct: 130 QDVMDTAYLLTADTD 144


>gi|292656541|ref|YP_003536438.1| hypothetical protein HVO_2415 [Haloferax volcanii DS2]
 gi|291370393|gb|ADE02620.1| Uncharacterized conserved protein [Haloferax volcanii DS2]
          Length = 158

 Score = 67.4 bits (163), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 57/168 (33%), Gaps = 32/168 (19%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRS-RAIVIRAYYYTTVVGDPEQQFSP 62
           P  ++ALF+DG N+        FD+D   +  A RS    +  A  Y             
Sbjct: 14  PSGRVALFVDGPNV----LRDEFDVDLDDIRAAGRSLGGQLSAARLYL--------DEHA 61

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFS 120
              L+      GF+VV                   +DV+LAVD    +  +  + + + S
Sbjct: 62  TPGLIQAAEARGFEVVV--------------TSGDVDVKLAVDLTRYAVEDRADVIAVAS 107

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
            D  F   +        +   ++         SD L+  A + M L  
Sbjct: 108 RDTDFKPALETANAYGLRTVAIAPGSYGR---SDALQNAATHAMTLDE 152


>gi|332703414|ref|ZP_08423502.1| protein of unknown function DUF88 [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332553563|gb|EGJ50607.1| protein of unknown function DUF88 [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 179

 Score = 67.4 bits (163), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 61/183 (33%), Gaps = 18/183 (9%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRS-RAIVIRAYYYTTVVGDPEQQFSP 62
             +++   +DG+ L    KA     DY KL               Y+     DP    + 
Sbjct: 2   NEKRVIWIVDGSYL---LKAPKGKFDYLKLKDTLEDLNGCPFYESYFLDSTLDPSDAQNA 58

Query: 63  LHPLLDWLHYNG-------FQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--L 113
            +  L      G       ++V     +        + V+  +DV +       +     
Sbjct: 59  FYTWLKTAPPKGPKMRVRLYKVKTLSFRCPNGEYVERHVQKGVDVGITTLLIRLATQGMY 118

Query: 114 EHLVIFSGDGCFTTLVAALQR-KVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
           + LV+ +GDG F   ++ ++    K+  +     +     S  L+  AD  + L     +
Sbjct: 119 DRLVLSTGDGDFEDAISYIKEDLHKEFWLAGFTDT----ISADLQCYADRVVWLDDHWEK 174

Query: 173 IAR 175
           I +
Sbjct: 175 IRK 177


>gi|293443850|ref|ZP_06662273.1| predicted protein [Escherichia coli B088]
 gi|291323775|gb|EFE63202.1| predicted protein [Escherichia coli B088]
          Length = 214

 Score = 67.4 bits (163), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 67/185 (36%), Gaps = 18/185 (9%)

Query: 2   FDPREKIALFIDGANLYASSKAL----GFDIDYRKLLKAFRSR--AIVIRAYYYTTVVGD 55
             P++++  FIDG NLY +           +D  KL   + S+   ++   ++++     
Sbjct: 3   EPPKKRVQCFIDGYNLYHAIDETRETKNHWVDLWKLASKYISKNTCVLSDVFWFSAPPVH 62

Query: 56  PEQQFSPLH-PLLDWLHYNGFQVVAKVAKEFTENCG---------RKRVKSSMDVELAVD 105
             ++   LH      L + G  VV+   K    +C           +  +   DV LA+ 
Sbjct: 63  LTKRKQELHANYSAALQHCGVSVVSGKFKLKRVSCNAGSGCGKSFDRHEEKESDVNLAIG 122

Query: 106 AFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF 163
               +  +  +  ++ + D      +  ++ +     +   +       ++ L+  A+  
Sbjct: 123 LVSAACNDEFDIAIVITADSDLCPPIKYVRNRFPNKQVWILIPPKRRSRANDLKAIANRD 182

Query: 164 MDLAY 168
            ++  
Sbjct: 183 FEITN 187


>gi|317132397|ref|YP_004091711.1| hypothetical protein Ethha_1443 [Ethanoligenens harbinense YUAN-3]
 gi|315470376|gb|ADU26980.1| hypothetical protein Ethha_1443 [Ethanoligenens harbinense YUAN-3]
          Length = 201

 Score = 67.4 bits (163), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 65/204 (31%), Gaps = 37/204 (18%)

Query: 5   REKIALFIDGANLYASSKALGFD-------IDYR----KLLKAFRSRAIVIRAYYYTTVV 53
            +++ +FID  N   +      D       +DY     +L K       +++ + +    
Sbjct: 1   MQRVMVFIDQLNFEIALLNYYRDNGSQAPRLDYNAIPVELTKLLPGENHLVKTFLFVPKP 60

Query: 54  GDPEQQFSPLHPLLDW----LHYNGFQVVAKVAKEF----------TENCGRKRVKSSMD 99
            +            +W     + + F V+                  +     + +   D
Sbjct: 61  DEFLMNLPRWQHYSNWINGMKNQHYFTVIEGSYVARQIDESIPMDANDPRSYYKEEKGTD 120

Query: 100 VELAVDAFE--QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLR 157
           + +AV           +  +I SGD  + T++  L    K  T+++ V       S  LR
Sbjct: 121 INIAVHVLTKGFMNAYDTALILSGDSDYVTVLDILNMIGK-TTVIAGVKGQ--NISK-LR 176

Query: 158 RQADYFMDLAY------LKNEIAR 175
           +  D    +        L+++  R
Sbjct: 177 KSCDDSYIIDDTFFQKCLRDDSKR 200


>gi|328948489|ref|YP_004365826.1| hypothetical protein Tresu_1630 [Treponema succinifaciens DSM 2489]
 gi|328448813|gb|AEB14529.1| Domain of unknown function DUF88 [Treponema succinifaciens DSM
           2489]
          Length = 325

 Score = 67.4 bits (163), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 25/169 (14%), Positives = 53/169 (31%), Gaps = 30/169 (17%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           KIA+F D  N+   +  +   IDY         +  ++    Y        + +      
Sbjct: 6   KIAVFFDSENVP--ADKVPLIIDY------LSGKGDILFQRAYADWSVSNTKSWKDQLN- 56

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG---LEHLVIFSGDG 123
                    +      ++F         K ++D  + +DA E +     +    I + D 
Sbjct: 57  ---------KTPITAIQQF-----HHNEKQAVDKLIMMDAIEMAINHADINLFAIIASDN 102

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
            + +L   L+   K+V  +        +      +  + F  L  L  +
Sbjct: 103 GYHSLALRLRELGKRVIGIGEKAKCNPIW----IKSCNEFSYLEDLDEK 147


>gi|300710717|ref|YP_003736531.1| hypothetical protein HacjB3_06760 [Halalkalicoccus jeotgali B3]
 gi|299124400|gb|ADJ14739.1| hypothetical protein HacjB3_06760 [Halalkalicoccus jeotgali B3]
          Length = 157

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 55/162 (33%), Gaps = 31/162 (19%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           + L +DG N+        FD+D   +         ++    Y                L+
Sbjct: 22  VGLLVDGPNV----LREEFDVDLDDVRAVGDDAGTLVATRLYL--------DEHATPGLI 69

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCF 125
                 G++VV                   +DV+LA+DA E   ++ ++ L++ S D  F
Sbjct: 70  QAAEARGYEVVI--------------TSGDVDVKLAIDATELVYTDAVDTLMVVSRDTDF 115

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
             ++    ++      V+         SD LR  A   + L 
Sbjct: 116 KPVLEKAAKRGIHTVAVAPGTYGR---SDALRNAAQEAVLLD 154


>gi|241765008|ref|ZP_04763004.1| protein of unknown function DUF88 [Acidovorax delafieldii 2AN]
 gi|241365405|gb|EER60198.1| protein of unknown function DUF88 [Acidovorax delafieldii 2AN]
          Length = 358

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/172 (18%), Positives = 53/172 (30%), Gaps = 34/172 (19%)

Query: 9   ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68
           A+FID  NL  ++       D R   +    +    RAY     +   E           
Sbjct: 17  AVFIDADNLNEATALDHVLTDLRHRAERVLYK----RAYGRVDSLKGIESVLWRH----- 67

Query: 69  WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFT 126
                G + V                K + D  L +DA E   ++ ++ + I SGD  F 
Sbjct: 68  -----GVRPV----------SNMIVNKVTTDSALVIDAVEAVCTQDIDTVAICSGDADFV 112

Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
            L   ++ +   V   S      +  S+      D  +    L   + +   
Sbjct: 113 PLATWVRERGCHVLCFSLSNKIFAN-SESF---YDEVI----LLEVVEKPES 156


>gi|169236305|ref|YP_001689505.1| hypothetical protein OE3283F [Halobacterium salinarum R1]
 gi|167727371|emb|CAP14159.1| conserved hypothetical protein [Halobacterium salinarum R1]
          Length = 152

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/157 (21%), Positives = 54/157 (34%), Gaps = 31/157 (19%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           +ALF+DG N+        FD+D   + +       +     Y               PL+
Sbjct: 17  VALFVDGPNV----LRDEFDVDLDDVREIAGEVGPLAVTRLYL--------DEHATPPLI 64

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCF 125
                 G+ V                    +DV+LAVDA E    +G++ L + S D  F
Sbjct: 65  QAGEARGYDVRV--------------TSGDVDVKLAVDATELVLDDGVDVLAVASRDTDF 110

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162
             +    +R+  +   ++         SD LR  A  
Sbjct: 111 KPVFEQAERRGVRTLAIAPGEHGR---SDALRNAATD 144


>gi|18978411|ref|NP_579768.1| hypothetical protein PF2039 [Pyrococcus furiosus DSM 3638]
 gi|18894253|gb|AAL82163.1| hypothetical protein PF2039 [Pyrococcus furiosus DSM 3638]
          Length = 162

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 58/167 (34%), Gaps = 32/167 (19%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           I L IDG N+        F I    + KA      +  A                   L+
Sbjct: 26  IGLIIDGPNI----LRKEFKIRLEDIKKALEKIGKIRVAKVVLNQYAP--------QGLI 73

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCF 125
           + +   GF+ +               V    DV +A++A E      ++ L + + D  F
Sbjct: 74  EAVVNQGFEPII--------------VAGDTDVRVAIEAMELIYNSDIDVLALATRDADF 119

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
             +++  +R+ K+  ++          +  L+  ADY + +   + +
Sbjct: 120 LPIISEAKRRGKETVVIGVEPGF----AVALQNAADYVIIMEKREED 162


>gi|325958516|ref|YP_004289982.1| hypothetical protein Metbo_0759 [Methanobacterium sp. AL-21]
 gi|325329948|gb|ADZ09010.1| protein of unknown function DUF88 [Methanobacterium sp. AL-21]
          Length = 163

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/163 (13%), Positives = 50/163 (30%), Gaps = 32/163 (19%)

Query: 6   EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
           + + L +DG N+        F ++   +         +                      
Sbjct: 24  KNVGLLVDGPNM----LRKEFSLNLDIVRDIIAEYGNMRVGKV--------LLNQYASDK 71

Query: 66  LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDG 123
           L++ +   G+  +               V    DV +AV+A E      ++ + + + D 
Sbjct: 72  LIEAIVNQGYTPIV--------------VAGDTDVYMAVEAMELIYNPNIDIIALMTRDA 117

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
            F  ++   +   K+  ++          S  L+  AD  + L
Sbjct: 118 DFLPIINKAKENGKETLVIGAEPGF----SAALQNSADSAIVL 156


>gi|119472307|ref|ZP_01614467.1| hypothetical protein ATW7_14156 [Alteromonadales bacterium TW-7]
 gi|119445029|gb|EAW26325.1| hypothetical protein ATW7_14156 [Alteromonadales bacterium TW-7]
          Length = 227

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/140 (22%), Positives = 48/140 (34%), Gaps = 26/140 (18%)

Query: 6   EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
           +K ALFID  N+            Y + + A      V +AY     V         L P
Sbjct: 5   KKTALFIDAENISH---------KYIEQIMAKFEHIEVKKAYGNFGAV--------QLKP 47

Query: 66  LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDG 123
            ++       ++V        +    K   ++ D+ L V   E      ++   I S D 
Sbjct: 48  WVNICSRFAIEMVY-------QEKLVKSKSNAADIALTVGVMESLYVSPIDTFAIASSDS 100

Query: 124 CFTTLVAALQRKVKKVTIVS 143
            F  LV  L+R  KKV    
Sbjct: 101 DFAALVHFLRRNGKKVIGFG 120


>gi|303246560|ref|ZP_07332839.1| protein of unknown function DUF88 [Desulfovibrio fructosovorans JJ]
 gi|302492270|gb|EFL52145.1| protein of unknown function DUF88 [Desulfovibrio fructosovorans JJ]
          Length = 283

 Score = 66.6 bits (161), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 61/189 (32%), Gaps = 34/189 (17%)

Query: 5   REKIALFIDGANLYASS-----------KALGFDID----YRKLLKAFRSRAIVIRAYYY 49
            +++A+F+D                   + +   ID    + K      S   ++R Y+Y
Sbjct: 1   MDRVAIFVDAGYFCTGGGSSIAGRKTKRREVNVKIDNTIAFLKEKSKKLSGLPLLRIYWY 60

Query: 50  TTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ 109
              +                     +   A   K           +  +D  +  D  E 
Sbjct: 61  DGALSQNLTTEQQ------------YIASAADVKLRLGTVNGYGEQKGVDARIVTDLTEL 108

Query: 110 SE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF--MD 165
           S    +   V+ +GD      V   Q +  +V ++S   S     S  LRR+AD    + 
Sbjct: 109 SRLNAICDAVLLAGDEDLRIGVELAQAQGVRVHLLSIQNSG---CSTPLRREADTCSEIS 165

Query: 166 LAYLKNEIA 174
           +  +KN I+
Sbjct: 166 IDEIKNLIS 174


>gi|329850271|ref|ZP_08265116.1| hypothetical protein ABI_31720 [Asticcacaulis biprosthecum C19]
 gi|328840586|gb|EGF90157.1| hypothetical protein ABI_31720 [Asticcacaulis biprosthecum C19]
          Length = 240

 Score = 65.8 bits (159), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 60/171 (35%), Gaps = 15/171 (8%)

Query: 5   REKIALFIDGANLYASSKALGF----DIDYRKLLKAFRSRAI-VIRAYYYTTVVGDPEQQ 59
           R++ A + DG NLY +  A        ++ + L +A   R+  + R  + +      + +
Sbjct: 16  RQRAAFYFDGFNLYHAVDAYKRPYLKWLNLKALARAVAPRSEAIKRVVWCSAYRPQNKSK 75

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRK------RVKSSMDVELAVDAFEQSEG- 112
                     L   G           +++C          ++   DV LA+     +E  
Sbjct: 76  LKRHEDYRKALEGQGVICRMGHFVHASDSCNACGHNWQLHIEKQGDVNLALSIAADAEDD 135

Query: 113 -LEHLVIFSGDGCFTTLVAALQRKV--KKVTIVSTVLSDPSMASDQLRRQA 160
             +   + + DG        ++ +   KK+ +VS     P+   ++L    
Sbjct: 136 LFDVCYLVTADGDHAATARYIRERFPKKKLVLVSPPGRHPNRHIERLAHAC 186


>gi|313125619|ref|YP_004035889.1| hypothetical protein Hbor_08480 [Halogeometricum borinquense DSM
           11551]
 gi|312291984|gb|ADQ66444.1| uncharacterized conserved protein [Halogeometricum borinquense DSM
           11551]
          Length = 177

 Score = 65.8 bits (159), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 50/164 (30%), Gaps = 31/164 (18%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           ++ALF+DG N+        FD+D   + +A            Y                L
Sbjct: 31  RVALFVDGPNV----LRDEFDVDLDDVREAAAEIGRPTATRLYL--------DEHATPGL 78

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124
           +      GF+VV                   +DV LAVD  + +     + + + S D  
Sbjct: 79  IQAAEARGFEVVI--------------TSGDVDVRLAVDITQFAVEGRADVIAVASRDTD 124

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
           F   +        +   ++         SD LR  A     L  
Sbjct: 125 FKPAIETANAYGLRTFAIAPGEFGR---SDALRNAATDSATLGD 165


>gi|331746820|ref|YP_004422857.1| hypothetical protein TERMP_02242 [Thermococcus barophilus MP]
 gi|315185031|gb|ADT85215.1| hypothetical protein TERMP_02242 [Thermococcus barophilus MP]
          Length = 182

 Score = 65.4 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 56/163 (34%), Gaps = 25/163 (15%)

Query: 7   KIALFIDGANLYASSK-------ALGFDIDYRKLLKAFRS-RAIVIRAYYYTTVVGDPEQ 58
           K A+ IDG N+    +        L  DI+++K  K   S    V  A  Y         
Sbjct: 2   KAAVLIDGENVVMCLRDVVGGKVHLDKDINWKKFFKYLESLDYEVTIARIYAN-----PF 56

Query: 59  QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEH 115
            F     + + L   G +VV   +            KS+ D  + VD          ++ 
Sbjct: 57  IFLKNPHIANNLEKMGIKVVLADSTMKENGP-----KSTTDATMIVDGISILYERPAIDA 111

Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRR 158
           +VI SGD  F  L    +   + V   +     P   ++ ++ 
Sbjct: 112 IVIVSGDRDFLPLAEKAKELGRTVLFAAF----PDSTANVIKN 150


>gi|291545850|emb|CBL18958.1| Protein of unknown function DUF88 [Ruminococcus sp. SR1/5]
          Length = 185

 Score = 65.4 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 31/82 (37%), Gaps = 8/82 (9%)

Query: 102 LAVDAFE--QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQ 159
           + +DA +   S  ++   I S D  FT L A L+     V  +    +     S      
Sbjct: 1   MIIDAMDILYSGNVDGYCIVSSDSDFTRLAARLRESGMLVLGMGEEKTPKPFIS-----A 55

Query: 160 ADYFMDLAYL-KNEIARDPDED 180
            + F  L  L +N+   +  ED
Sbjct: 56  CNQFKYLDLLYRNQQEEEKKED 77


>gi|229496814|ref|ZP_04390524.1| cold shock protein [Porphyromonas endodontalis ATCC 35406]
 gi|229316269|gb|EEN82192.1| cold shock protein [Porphyromonas endodontalis ATCC 35406]
          Length = 298

 Score = 65.4 bits (158), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 69/197 (35%), Gaps = 35/197 (17%)

Query: 7   KIALFIDGANLYASSKALGF------DIDYRKLLKAFRSR-----------AIVIRAYYY 49
           +I +F DG      S    +       +    L    +++             ++ A+Y+
Sbjct: 9   RIGVFYDGNYFLHVSNYYNYSHERKNRLSIAGLHHFIKNQVAQQESTDERLCQIVDAHYF 68

Query: 50  TTVVGDPEQQFSPL-----HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAV 104
              +   E + +           D L   G        +      G  + +  +DV LA+
Sbjct: 69  RGRLTANEAKATGQTLYYDRLFDDILSSEGVTTHYLPLR---SKQGGGKQEKGIDVWLAL 125

Query: 105 DAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVST--------VLSDPSMASD 154
           +AFEQ+  +    LV+ + DG +  L+  L     +V ++S           S  +  S 
Sbjct: 126 EAFEQAFYKRFNVLVLIACDGDYVPLIRKLNALGTRVMVLSWDFEYTNDNGKSMTTRTSQ 185

Query: 155 QLRRQADYFMDLAYLKN 171
           +L  +  Y + +  + +
Sbjct: 186 ELLEEVTYPIAMHEIID 202


>gi|332296842|ref|YP_004438764.1| protein of unknown function DUF88 [Treponema brennaborense DSM
           12168]
 gi|332179945|gb|AEE15633.1| protein of unknown function DUF88 [Treponema brennaborense DSM
           12168]
          Length = 332

 Score = 65.0 bits (157), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 57/165 (34%), Gaps = 26/165 (15%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
            A+  D  N+   +         + ++        +  A  +           + +  + 
Sbjct: 7   TAILWDIENVTPPAGTSY----IQSIIDTISEAGKISYAMAFGDW------NKNNIKNIA 56

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGC 124
             L  N F+++   A            K S D+ +     E       +E  V+ +GD  
Sbjct: 57  SELASNSFELIHVPA----------SRKDSADMSMVAHGVELIFQYPHIESYVLITGDAD 106

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
           F  L+ +L++  K+  I+       + AS+ L   AD ++D   +
Sbjct: 107 FRPLLLSLRKYGKQTLIICD---VKNNASEDLLNMADKYLDYREI 148


>gi|258649060|ref|ZP_05736529.1| conserved hypothetical protein [Prevotella tannerae ATCC 51259]
 gi|260850689|gb|EEX70558.1| conserved hypothetical protein [Prevotella tannerae ATCC 51259]
          Length = 208

 Score = 65.0 bits (157), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 46/148 (31%), Gaps = 30/148 (20%)

Query: 34  LKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKR 93
           +    S    I    Y        +++  +           F      A  + E      
Sbjct: 1   MSFISSYGNPIVQRIYADWTKPAMKRWKEV--------AKTFSFRLVEAISYIE------ 46

Query: 94  VKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151
           VK++ D+ L +DA +      ++   I S D  +  L   ++ +   V       +  S+
Sbjct: 47  VKNTTDMALVIDAMDLLHGKTVQGFCIISSDSDYALLAQRIREEGLLVLGYGEQKTPASL 106

Query: 152 --ASDQLR------------RQADYFMD 165
             +S + R               DYF+D
Sbjct: 107 QNSSHEFRFSDKTEPVQPNNNTPDYFID 134


>gi|289580394|ref|YP_003478860.1| hypothetical protein Nmag_0713 [Natrialba magadii ATCC 43099]
 gi|289529947|gb|ADD04298.1| protein of unknown function DUF88 [Natrialba magadii ATCC 43099]
          Length = 154

 Score = 65.0 bits (157), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/161 (21%), Positives = 55/161 (34%), Gaps = 31/161 (19%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           + LF+DG N++       FD+D   L         V     Y                L+
Sbjct: 21  VGLFVDGPNVF----RDEFDVDLDDLRDVAGGLGRVGVIRLYL--------DEHATPGLI 68

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCF 125
                 GF+VV                   +DV+LAVDA   S  + ++ L I S D  F
Sbjct: 69  QAAEARGFEVVI--------------TSGDVDVKLAVDATALSTDQTIDTLAIASRDTDF 114

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
             ++     +  +   ++         SD L+  AD  + L
Sbjct: 115 KPVLEHAAAQGIETIAIAPGSHGR---SDALQNAADEAITL 152


>gi|291526127|emb|CBK91714.1| Protein of unknown function DUF88 [Eubacterium rectale DSM 17629]
          Length = 189

 Score = 64.7 bits (156), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 64/164 (39%), Gaps = 27/164 (16%)

Query: 5   REKI--ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
           R+K+  ALFIDG N+  SSK         ++ K    + ++     Y     +  + +S 
Sbjct: 50  RKKVNAALFIDGENI--SSKKA------EQIQKIANKQGVLGTEKVYGLQKDECTKSWSD 101

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
               LD       ++     K+  +N  +K V             + ++ ++ + I + D
Sbjct: 102 KAKKLDIKD---IRLCGNPEKDKVDNKIKKDVNQE---------IKNNKSVDVVCIATSD 149

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
             +T  V  L+R+ KKV  +    +       +LR     F ++
Sbjct: 150 KGYTDTVKELRRQGKKVVGIGEKKAPK-----ELRDACSEFFEI 188


>gi|304315197|ref|YP_003850344.1| hypothetical protein MTBMA_c14520 [Methanothermobacter marburgensis
           str. Marburg]
 gi|302588656|gb|ADL59031.1| conserved hypothetical protein [Methanothermobacter marburgensis
           str. Marburg]
          Length = 157

 Score = 64.7 bits (156), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 59/166 (35%), Gaps = 32/166 (19%)

Query: 3   DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
           + ++ + L +DG N+    K    D+D+ K L     R  +                   
Sbjct: 17  EDKKNLGLLVDGPNMLR--KEFCSDLDFVKNL--LVDRGNLRVGKV--------LLNQYA 64

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFS 120
              L++ +   GF  +               V   +DV+LAV+AFE      ++ + + +
Sbjct: 65  SDKLIEAVVNQGFSPMI--------------VAGDVDVQLAVEAFELIHNPHIDVVALMT 110

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
            +  F  L+   +   K+  ++          S  L+  AD  + L
Sbjct: 111 RNADFLPLINIAKENGKETLVIGAEPGF----SIALQNSADDSIKL 152


>gi|257053809|ref|YP_003131642.1| protein of unknown function DUF88 [Halorhabdus utahensis DSM 12940]
 gi|256692572|gb|ACV12909.1| protein of unknown function DUF88 [Halorhabdus utahensis DSM 12940]
          Length = 148

 Score = 64.7 bits (156), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 50/162 (30%), Gaps = 31/162 (19%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           + L++DG N+        FD+D   L         +  A  Y                L+
Sbjct: 15  VGLYVDGPNV----LREEFDVDLDDLRAIATEYGRIGAARLYL--------DEHATPGLI 62

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE--GLEHLVIFSGDGCF 125
                 GF VV                   +DV+LAVDA   +    +E LVI S D  F
Sbjct: 63  QAGEARGFAVVT--------------TSGDVDVKLAVDATRAASEARIETLVIASRDTDF 108

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
              +     +  +   ++         SD L   A     L 
Sbjct: 109 KPALEVAADRGCRTVAIAPGEHGR---SDALSNTAHESHSLE 147


>gi|302690852|ref|XP_003035105.1| hypothetical protein SCHCODRAFT_105532 [Schizophyllum commune H4-8]
 gi|300108801|gb|EFJ00203.1| hypothetical protein SCHCODRAFT_105532 [Schizophyllum commune H4-8]
          Length = 500

 Score = 64.3 bits (155), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 56/167 (33%), Gaps = 20/167 (11%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP--EQ 58
           MF   EK+A+F D  N    ++  G+D+    +         + +   Y           
Sbjct: 1   MFRSSEKVAVFWDYENCAPPAQVSGYDV-VDTIRGIGHRYGAICQLKAYLEPPRQYVDPS 59

Query: 59  QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEH 115
             + L  L   L  +G  +                +K   D  + VD    +        
Sbjct: 60  GTARLLALRTELQASGVSLTDCP---------HNGMKEVADHMMQVDMLAFALDHPAPAT 110

Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162
           +++ +GD  F    A L+ +  +V I+S          + L+ QAD 
Sbjct: 111 VILITGDRDFAYATAVLRARRYRVIILSL-----PHIHETLKAQADE 152


>gi|144575162|gb|AAZ43949.2| conserved hypothetical protein [Mycoplasma synoviae 53]
          Length = 385

 Score = 64.3 bits (155), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 57/153 (37%), Gaps = 29/153 (18%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M + R  IAL ID  N Y S K+         L+K  + R  +  A   T+       +F
Sbjct: 1   MLNQRPNIALIIDYEN-YKSEKS------IISLIKGLKFRGNLAIAKLITSDKSQINNKF 53

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVI 118
                          ++     +++ +       KS+ D  L ++  +    + ++   I
Sbjct: 54  --------------HELEIVYQQKYIDG------KSTADPRLIIETMQILYEKDIDIFCI 93

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151
            + D  F  L+  L+ K K V +    ++ P +
Sbjct: 94  ATSDSDFVYLLQKLKSKNKYVILACESVASPWL 126


>gi|71894552|ref|YP_278660.1| hypothetical protein MS53_0541 [Mycoplasma synoviae 53]
          Length = 391

 Score = 64.3 bits (155), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 57/153 (37%), Gaps = 29/153 (18%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M + R  IAL ID  N Y S K+         L+K  + R  +  A   T+       +F
Sbjct: 7   MLNQRPNIALIIDYEN-YKSEKS------IISLIKGLKFRGNLAIAKLITSDKSQINNKF 59

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVI 118
                          ++     +++ +       KS+ D  L ++  +    + ++   I
Sbjct: 60  --------------HELEIVYQQKYIDG------KSTADPRLIIETMQILYEKDIDIFCI 99

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151
            + D  F  L+  L+ K K V +    ++ P +
Sbjct: 100 ATSDSDFVYLLQKLKSKNKYVILACESVASPWL 132


>gi|298531231|ref|ZP_07018631.1| conserved hypothetical protein [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298508841|gb|EFI32747.1| conserved hypothetical protein [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 214

 Score = 64.3 bits (155), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 60/188 (31%), Gaps = 28/188 (14%)

Query: 4   PREKIALFIDGANLYASSKALGFD-------IDYRKLLKAFRSRA-------IVIRAYYY 49
           P +KI   +DG NLY S +  G         +D + L  +             +   YY+
Sbjct: 2   PTKKITYLVDGFNLYHSVRKAGKQLKASTKWLDLKSLCISMIHNFKPKADKLELENIYYF 61

Query: 50  TTVVG--DPEQQFSPLHPLLDWLHYNGFQVVAKVAKE------FTENCGRKRVKSSMDVE 101
           +      +          L+  L   G +V     K       F      K  +   DV 
Sbjct: 62  SAYAYHLNDPDMVQRHKSLVACLEDTGVKVEINRFKYKAIDCPFCNKTIPKYEEKETDVS 121

Query: 102 LAVDAFE--QSEGLEHLVIFSGDGCFTTLVA-ALQRKVKKVTIVSTVLSDPSMASDQLRR 158
           +A+   E    +  +  ++ SGD      V  A++    K T  +      +    +L +
Sbjct: 122 IALKLQEIFIKDECDVAILVSGDTDLAPAVRLAIKLFPAKHTFFAFPAFRKNN---ELAK 178

Query: 159 QADYFMDL 166
                + +
Sbjct: 179 LCSGSITI 186


>gi|238924719|ref|YP_002938235.1| hypothetical protein EUBREC_2370 [Eubacterium rectale ATCC 33656]
 gi|238876394|gb|ACR76101.1| Hypothetical protein EUBREC_2370 [Eubacterium rectale ATCC 33656]
          Length = 191

 Score = 64.3 bits (155), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 64/164 (39%), Gaps = 27/164 (16%)

Query: 5   REKI--ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
           R+K+  ALFIDG N+  SSK         ++ K    + ++     Y     +  + +S 
Sbjct: 52  RKKVNAALFIDGENI--SSKKA------EQIQKIANKQGVLGTEKVYGLQKDECTKSWSD 103

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
               LD       ++     K+  +N  +K V             + ++ ++ + I + D
Sbjct: 104 KAKKLDIKD---IRLCGNPEKDKVDNKIKKDVNQE---------IKNNKSVDVVCIATSD 151

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
             +T  V  L+R+ KKV  +    +       +LR     F ++
Sbjct: 152 KGYTDTVKELRRQGKKVVGIGEKKAPK-----ELRDACSEFFEI 190


>gi|254415491|ref|ZP_05029251.1| hypothetical protein MC7420_4949 [Microcoleus chthonoplastes PCC
           7420]
 gi|196177672|gb|EDX72676.1| hypothetical protein MC7420_4949 [Microcoleus chthonoplastes PCC
           7420]
          Length = 265

 Score = 63.9 bits (154), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 51/161 (31%), Gaps = 20/161 (12%)

Query: 16  NLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGF 75
           NLY   + +        LL   +++  ++    Y         Q          L   GF
Sbjct: 17  NLYWDLQNVSIQKSAHLLLSFAQTQGHLLAQNVYYN------SQCQNQAQAKKPLSRLGF 70

Query: 76  QVVA--KVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQ 133
                    K+  ++         +  + + D          +++ SGDG F  LV  LQ
Sbjct: 71  DCRDVPCPLKDSADHQLIAHCLKDIHSDRSPDI---------IILVSGDGDFCPLVRNLQ 121

Query: 134 RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
              KKV I + + +        L +  D F  +  L   + 
Sbjct: 122 SLDKKVIIFAQLGNVKQKL-KDLVQ--DDFYFVDQLPKLVQ 159


>gi|254417369|ref|ZP_05031111.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
           7420]
 gi|196175804|gb|EDX70826.1| conserved hypothetical protein [Microcoleus chthonoplastes PCC
           7420]
          Length = 302

 Score = 63.9 bits (154), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 5/86 (5%)

Query: 7   KIALFIDGANLYASSKALGFD-IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
           ++A+FID AN+Y S+  LGFD  DY  LL   + +    +A++YT +     QQ      
Sbjct: 187 RVAIFIDAANIYHSALQLGFDPPDYADLLAFLKRQYSSYQAFFYTGLDSTNRQQ----KR 242

Query: 66  LLDWLHYNGFQVVAKVAKEFTENCGR 91
           LL  L   G+++++K   +  +   +
Sbjct: 243 LLFRLQNLGYKIISKEIIKRADGSCK 268


>gi|294628827|ref|ZP_06707387.1| conserved hypothetical protein [Streptomyces sp. e14]
 gi|292832160|gb|EFF90509.1| conserved hypothetical protein [Streptomyces sp. e14]
          Length = 408

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/175 (12%), Positives = 53/175 (30%), Gaps = 26/175 (14%)

Query: 5   REKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSR------AIVIRAYYYT 50
            ++  + +D   L  ++              +D+  L++  R +        ++R Y++ 
Sbjct: 1   MDRCIVLVDAGYLLGAAASLLAGEPSRSRITVDHSALVQQLREQAESDTERPLLRIYWFD 60

Query: 51  TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110
                  Q                      V          +  +  +D  +  +  E +
Sbjct: 61  GAPDRVPQ---------PEHRRLRVMPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELA 111

Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162
                  +V+ +GDG     + A +     V + +   +D     S+ L  +AD 
Sbjct: 112 RNRACSDVVLVTGDGDLLPGMMAAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 166


>gi|332667285|ref|YP_004450073.1| hypothetical protein Halhy_5375 [Haliscomenobacter hydrossis DSM
           1100]
 gi|332336099|gb|AEE53200.1| protein of unknown function DUF88 [Haliscomenobacter hydrossis DSM
           1100]
          Length = 315

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 63/185 (34%), Gaps = 36/185 (19%)

Query: 7   KIALFIDG------ANLYASSKALGFDIDYRKLLKAFRS-----------RAIVIRAYYY 49
           +I +F DG      +N Y         I  R L    R            R  +I A+Y+
Sbjct: 13  RIGVFYDGHYFLQVSNYYNYVHDRRSRISIRGLHDFVRKQVAIEEDEEFHRCQIIDAHYF 72

Query: 50  TTVVGDPEQQFS-----PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAV 104
              +   E               D L   G  V     + F      +  +  +DV LA+
Sbjct: 73  RGRLSASEASQRGNLLYFERAFDDILMSEGVSVHYLPVRNFHG----RWQEKGIDVWLAL 128

Query: 105 DAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS--------TVLSDPSMASD 154
           +AFE +  +  + +VI + DG ++ LV  L     +V ++               +  S+
Sbjct: 129 EAFEMTFYKRFDVVVILAADGDYSPLVRKLHSLGSRVMLLHWNFEYTDEEGNRFSTRTSN 188

Query: 155 QLRRQ 159
           +L   
Sbjct: 189 ELVSS 193


>gi|328881764|emb|CCA55003.1| hypothetical protein SVEN_1716 [Streptomyces venezuelae ATCC 10712]
          Length = 447

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/175 (12%), Positives = 53/175 (30%), Gaps = 26/175 (14%)

Query: 5   REKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSRAI------VIRAYYYT 50
            ++  + +D   L  ++              +D+  L++    RA       ++R Y++ 
Sbjct: 1   MDRCVVLVDAGYLLGAAASLLAGEPARSRITVDHAGLIQQLSQRAEAETALPLLRIYWFD 60

Query: 51  TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110
                  Q                      V          +  +  +D  +  +  E +
Sbjct: 61  GAPDRVPQ---------PEHRRLRVMPRVTVRLGALTRSDGRWAQKGVDAAMHTELTELA 111

Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162
                  +V+ +GDG     + + +     V + +   +D     S+ L  +AD 
Sbjct: 112 RNRACSDIVLVTGDGDLLPGLMSAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 166


>gi|297161308|gb|ADI11020.1| hypothetical protein SBI_07900 [Streptomyces bingchenggensis BCW-1]
          Length = 457

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/175 (13%), Positives = 54/175 (30%), Gaps = 26/175 (14%)

Query: 5   REKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSRAI------VIRAYYYT 50
            ++  + +D   L  ++              +D+  L++  R RA       ++R Y++ 
Sbjct: 1   MDRCVVLVDAGYLLGAAASLLAGEPARSRISVDHATLIQGLRERAEAETERPLLRIYWFD 60

Query: 51  TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110
                  Q                      V          +  +  +D  +  +  E +
Sbjct: 61  GAPDRVPQ---------PEHRRLRVMPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELA 111

Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162
                  +V+ +GDG     + + +     V + +   +D     S+ L  +AD 
Sbjct: 112 RNRACSDIVLVTGDGDLLPGLMSAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 166


>gi|21220543|ref|NP_626322.1| hypothetical protein SCO2062 [Streptomyces coelicolor A3(2)]
 gi|256788319|ref|ZP_05526750.1| hypothetical protein SlivT_27854 [Streptomyces lividans TK24]
 gi|5596807|emb|CAB51454.1| hypothetical protein [Streptomyces coelicolor A3(2)]
          Length = 403

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/175 (13%), Positives = 54/175 (30%), Gaps = 26/175 (14%)

Query: 5   REKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSRAI------VIRAYYYT 50
            ++  + +D   L  ++              +D+  L++  R RA       ++R Y++ 
Sbjct: 1   MDRCIVLVDAGYLLGAAASLLAGEPSRSRITVDHAALIQGLRDRAESDTQQPLLRIYWFD 60

Query: 51  TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110
                  Q                      V          +  +  +D  +  +  E +
Sbjct: 61  GAPDRVPQ---------PEHRRLRVMPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELA 111

Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162
                  +V+ +GDG     + A +     V + +   +D     S+ L  +AD 
Sbjct: 112 RNRACSDVVLVTGDGDLLPGMMAAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 166


>gi|239978948|ref|ZP_04701472.1| hypothetical protein SalbJ_05917 [Streptomyces albus J1074]
          Length = 409

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/175 (13%), Positives = 52/175 (29%), Gaps = 26/175 (14%)

Query: 5   REKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSRAI------VIRAYYYT 50
            ++  + +D   L  ++              +D+  L++  R RA       ++R Y++ 
Sbjct: 1   MDRCVVLVDAGYLLGAAASLLAGDPSRSRISVDHATLVRQLRERAEAETAQPLLRIYWFD 60

Query: 51  TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110
                  Q                      V          +  +  +D  +  +  E +
Sbjct: 61  GAPDRVPQ---------PEHRRLRVMPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELA 111

Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVST-VLSDPSMASDQLRRQADY 162
                  +V+ +GDG     + A +     V + +          S+ L  +AD 
Sbjct: 112 RNKACSDIVLVTGDGDLLPGMTAAKEHGVAVHLWAVQAAGGDYNQSEDLVAEADE 166


>gi|15679075|ref|NP_276192.1| hypothetical protein MTH1064 [Methanothermobacter
           thermautotrophicus str. Delta H]
 gi|2622162|gb|AAB85553.1| conserved protein [Methanothermobacter thermautotrophicus str.
           Delta H]
          Length = 155

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 56/164 (34%), Gaps = 32/164 (19%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
           ++ + L +DG N+        F  D   +      R  +         VG          
Sbjct: 17  KKSLGLLVDGPNM----LRKEFCSDLEFVKNLLFDRGNL--------KVGKVLLNQYASD 64

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGD 122
            L++ +   GF  +               V   +DV+LAV+AFE      ++ + I + +
Sbjct: 65  KLIEAVVNQGFSPMI--------------VAGDVDVQLAVEAFELIHNPNIDVVAIMTRN 110

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
             F  L+   +   K+  ++          S  L+  AD  + L
Sbjct: 111 ADFLPLINIAKENGKETLVIGAEPGF----SIALQNSADDSIIL 150


>gi|242398802|ref|YP_002994226.1| hypothetical protein TSIB_0816 [Thermococcus sibiricus MM 739]
 gi|242265195|gb|ACS89877.1| hypothetical protein TSIB_0816 [Thermococcus sibiricus MM 739]
          Length = 153

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 60/169 (35%), Gaps = 34/169 (20%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M D   +I L I+G N+  S     FDI    +L A      ++                
Sbjct: 1   MEDKYPQIGLVINGPNILLS----KFDISLEDILYALNDIGRIVVGKV------------ 44

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRK-RVKSSMDVELAVDAFE--QSEGLEHLV 117
                         ++  + + K   ++      V   +DV +AV+  +   +  +  L 
Sbjct: 45  -----------VINYEFSSNLLKSIIDSGLESVMVNGRVDVAVAVEGMKIIYNPRINVLA 93

Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
           + + D  F  LV   +R  K V +++         S+ L+  AD  ++L
Sbjct: 94  LATRDAHFMPLVFEAKRMGKDVIVIA----PEKKVSEALQNIADKTIEL 138


>gi|295839453|ref|ZP_06826386.1| conserved hypothetical protein [Streptomyces sp. SPB74]
 gi|197698733|gb|EDY45666.1| conserved hypothetical protein [Streptomyces sp. SPB74]
          Length = 420

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/175 (13%), Positives = 55/175 (31%), Gaps = 26/175 (14%)

Query: 5   REKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSRAI------VIRAYYYT 50
            ++  + +D   L  ++              +D+  L++  R RA       ++R Y++ 
Sbjct: 1   MDRCVVLVDAGYLLGAAASLLAGDPSRSRITVDHAALIQRLRERAEEETGQPLLRIYWFD 60

Query: 51  TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110
                  Q                 +    V          +  +  +D  +  +  E +
Sbjct: 61  GAPDRVPQ---------PEHRRLRVRPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELA 111

Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162
                  +V+ +GDG     + + +     V + +   +D     S+ L  +AD 
Sbjct: 112 RNRACSDVVLVTGDGDLLPGLVSAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 166


>gi|222479667|ref|YP_002565904.1| protein of unknown function DUF88 [Halorubrum lacusprofundi ATCC
           49239]
 gi|222452569|gb|ACM56834.1| protein of unknown function DUF88 [Halorubrum lacusprofundi ATCC
           49239]
          Length = 164

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 55/165 (33%), Gaps = 31/165 (18%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           +ALF+DG N+        FD+D   +  A  +   ++    Y                L+
Sbjct: 13  VALFVDGPNV----LREEFDVDLDDVRIAAEAEGQLVTTRLYL--------DEHATPGLI 60

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCF 125
                 GF+VV                   +DV+LAVDA   +    +  L I S D  F
Sbjct: 61  QAAEARGFEVVV--------------TSGDVDVKLAVDAARFAAEGRMSTLAIASRDTDF 106

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
             +V        +   ++         SD LR   +  + L   +
Sbjct: 107 KPVVEIANSYGIRTLAIAPGEFGR---SDALRNATNDSVTLDGDR 148


>gi|218132405|ref|ZP_03461209.1| hypothetical protein BACPEC_00264 [Bacteroides pectinophilus ATCC
           43243]
 gi|217992743|gb|EEC58745.1| hypothetical protein BACPEC_00264 [Bacteroides pectinophilus ATCC
           43243]
          Length = 251

 Score = 63.5 bits (153), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/197 (13%), Positives = 61/197 (30%), Gaps = 37/197 (18%)

Query: 4   PREKIALFIDGANLYASS-KALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
            + + A+F+D  + +           ++ + ++  ++   +   + +            P
Sbjct: 8   SKPRAAVFVDYEHWFYGYHNNFHMRPNFEEWIQELKNEYDIDELHVFGDFSERQIGAELP 67

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG---LEHLVIF 119
               +   +              T +      K   DV +    +  +      +  V+F
Sbjct: 68  ELQRITNNN-----------VTHTASDKLGVDKDFTDVIILDHIYRSAAKKKSADVYVLF 116

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD-------------- 165
           +GD  FT +V  L+   KKV I           S+ L+  A  +++              
Sbjct: 117 TGDAHFTCVVDYLKELNKKVVIYGVKFGF----SNALKSAATSYVEMPRQIQVKNHYNDL 172

Query: 166 ----LAYLKNEIARDPD 178
               L  L+ +  + P 
Sbjct: 173 ILASLDKLRRKPGKTPS 189


>gi|322368949|ref|ZP_08043516.1| hypothetical protein ZOD2009_05667 [Haladaptatus paucihalophilus
           DX253]
 gi|320551680|gb|EFW93327.1| hypothetical protein ZOD2009_05667 [Haladaptatus paucihalophilus
           DX253]
          Length = 160

 Score = 63.1 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 53/163 (32%), Gaps = 31/163 (19%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           +ALF+DG N+      +        +  A R    +     Y                L+
Sbjct: 20  VALFVDGPNVLRDDFDVDL----DDVRTAGRQLGQLATTRLYL--------DEHATPGLI 67

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCF 125
                 GF+VV                   +DV+LA+DA E +  E ++ L I S D  F
Sbjct: 68  QAAEARGFEVVI--------------TSGDVDVKLAIDATELALDERVDVLAIASRDTDF 113

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
             ++    R   +   ++         SD L+  A     +  
Sbjct: 114 KPVLEKAARNGVRTVAIAPGEYGR---SDALQNAAHEAFVIED 153


>gi|186681791|ref|YP_001864987.1| hypothetical protein Npun_R1332 [Nostoc punctiforme PCC 73102]
 gi|186464243|gb|ACC80044.1| protein of unknown function DUF88 [Nostoc punctiforme PCC 73102]
          Length = 283

 Score = 63.1 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 56/180 (31%), Gaps = 31/180 (17%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           + +F D  N+        F      LL+  +S+  +     Y          +       
Sbjct: 37  VGIFADIQNVSLIKGKGHF------LLEFAQSKGRIDCKNVYYN------SHYINQVCTK 84

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVD---AFEQSEGLEHLVIFSGDGC 124
           + L   G + V                 +S D  L  D   A   +  L  +++ SGD  
Sbjct: 85  NELEILGIKCVDVP----------DHSNNSADYRLMADCVKAVAFNPSLTTIILLSGDWD 134

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA--DYFMDLAYLKNEIARDPDEDKK 182
           +  L+  L+   KKV I +         S +L +    D F  +  L   +A       +
Sbjct: 135 YAGLICILKSLGKKVKIFA----QRGSESPKLIKLVGNDNFHFVDELPQLVANTNKTQPQ 190


>gi|78189938|ref|YP_380276.1| cold shock protein [Chlorobium chlorochromatii CaD3]
 gi|78172137|gb|ABB29233.1| Cold shock protein [Chlorobium chlorochromatii CaD3]
          Length = 310

 Score = 63.1 bits (152), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 60/171 (35%), Gaps = 31/171 (18%)

Query: 1   MFDPRE----KIALFIDGANLYASSKALGF------DIDYRKLLKAFRSR---------- 40
           M + R+    +I +F DG      S    +       I    L    R+           
Sbjct: 1   MVNNRDLSLTRIGVFYDGNYFLHISNYYNYFHERKARISISGLHHFVRNYIAQQEGSDEQ 60

Query: 41  -AIVIRAYYYTTVVGDPEQQFS-----PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRV 94
              ++ A+Y+   +   E               D L   G        K    +    R 
Sbjct: 61  LCQIVDAHYFRGRLNAYEAAQEGNALFYDRLFDDILSSEGVTTHYLPVKT---SQTGVRY 117

Query: 95  KSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS 143
           +  +DV LA++AFEQ+  +  + LV+ + DG +  L+  L     +V ++S
Sbjct: 118 EKGIDVWLALEAFEQAFYKRFDVLVLIASDGDYVPLIRKLNTLGTRVMVLS 168


>gi|126734452|ref|ZP_01750199.1| hypothetical protein RCCS2_09834 [Roseobacter sp. CCS2]
 gi|126717318|gb|EBA14182.1| hypothetical protein RCCS2_09834 [Roseobacter sp. CCS2]
          Length = 213

 Score = 62.7 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 50/176 (28%), Gaps = 24/176 (13%)

Query: 7   KIALFIDGANLYASSKALGF--DIDYRKLLKAFRSRAIVIRAYYY----TTVVGDPEQQF 60
           ++ +++DG NLY            D + L         VI    Y     +         
Sbjct: 2   RVRVYVDGFNLYYRLLKHSRYKWTDLKLLSSELLQTGDVIERIRYFTADVSPRAGDPDAP 61

Query: 61  SPLHPLLDWLHYNG----------FQVVAKVA--KEFTENCGRKRVKSSMDVELAVDAFE 108
           +        L               + + +    +E +    R   +   DV LA     
Sbjct: 62  TRQQAYFRALRTIPELEIHKGTFLAKTIHRPVRGQEESYVYVRDTEEKGSDVNLASHLLM 121

Query: 109 --QSEGLEHLVIFSGDGCFTTLVAAL-QRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
               +  +  ++ S D      +  + Q   K V +     + P   S  LR+ A 
Sbjct: 122 DGFCDTYDIALVMSQDTDLLEPIRMVSQELGKVVIVAWFEDTSP---SKLLRQYAT 174


>gi|302518506|ref|ZP_07270848.1| conserved hypothetical protein [Streptomyces sp. SPB78]
 gi|302427401|gb|EFK99216.1| conserved hypothetical protein [Streptomyces sp. SPB78]
          Length = 457

 Score = 62.7 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/174 (13%), Positives = 55/174 (31%), Gaps = 26/174 (14%)

Query: 6   EKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSRAI------VIRAYYYTT 51
           ++  + +D   L  ++              +D+  L++  R RA       ++R Y++  
Sbjct: 136 DRCVVLVDAGYLLGAAASLLAGDPSRSRITVDHAALIQRLRERAEEETGQPLLRIYWFDG 195

Query: 52  VVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE 111
                 Q                 +    V          +  +  +D  +  +  E + 
Sbjct: 196 APDRVPQ---------PEHRRLRVRPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELAR 246

Query: 112 G--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162
                 +V+ +GDG     + + +     V + +   +D     S+ L  +AD 
Sbjct: 247 NRACSDIVLVTGDGDLLPGLVSAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 300


>gi|302546171|ref|ZP_07298513.1| conserved hypothetical protein [Streptomyces hygroscopicus ATCC
           53653]
 gi|302463789|gb|EFL26882.1| conserved hypothetical protein [Streptomyces himastatinicus ATCC
           53653]
          Length = 435

 Score = 62.7 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/175 (13%), Positives = 54/175 (30%), Gaps = 26/175 (14%)

Query: 5   REKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSRAI------VIRAYYYT 50
            ++  + +D   L  ++              +D+  L++  R RA       ++R Y++ 
Sbjct: 1   MDRCVVLVDAGYLLGAAASLLAGEPARSRISVDHATLIQGLRERAEAETERPLLRIYWFD 60

Query: 51  TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110
                  Q                      V          +  +  +D  +  +  E +
Sbjct: 61  GAPDRVPQ---------PEHRRLRVMPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELA 111

Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162
                  +V+ +GDG     + + +     V + +   +D     S+ L  +AD 
Sbjct: 112 RNRACSDIVLVTGDGDLLPGLMSAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 166


>gi|325186423|emb|CCA20928.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 304

 Score = 62.7 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/178 (20%), Positives = 61/178 (34%), Gaps = 15/178 (8%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAI-VIRAYYYTTVVGDPEQQFSPLHPL 66
            AL IDGA    + +  G  +DY KL K    +    IR  +Y T               
Sbjct: 11  TALIIDGAYAEINGQKKG-GLDYLKLRKFLEEKGKAQIRERWYFTHDRRKYTTSFFTMIK 69

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKR------VKSSMDVELAVDAFEQSEG--LEHLVI 118
                   FQ+     K +   C R        V+  +D  +A      +     +  ++
Sbjct: 70  SAPPLGPQFQLKVYGTKSYACRCKRCHYRFSQFVQKGVDNGIATKLLSLAYENVCDRFIL 129

Query: 119 FSGDGCFTTLVAALQR-KVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
            +GDG F   +  ++    K++ +V    S     S  L++ A   + L      + R
Sbjct: 130 LAGDGDFYDSLYQVKNVLRKEIWVVGFRDSV----SADLQQLASMIIWLDDHWQGVQR 183


>gi|297194912|ref|ZP_06912310.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197723066|gb|EDY66974.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 427

 Score = 62.7 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/194 (12%), Positives = 58/194 (29%), Gaps = 28/194 (14%)

Query: 5   REKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRS------RAIVIRAYYYT 50
            ++  + +D   L  ++              +D+  L++  R       +  ++R Y++ 
Sbjct: 1   MDRCVVLVDAGYLLGAAASLLAGEPARSRITVDHASLIQGLRELAEADTQRPLLRIYWFD 60

Query: 51  TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110
                  Q                      V          +  +  +D  +  +  E +
Sbjct: 61  GAPDRVPQ---------PEHRRLRVMPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELA 111

Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADYFMDLA 167
                  +V+ +GDG     + + +     V + +   +D     S+ L  +AD    L 
Sbjct: 112 RNRACSDVVLVTGDGDLLPGLMSAKEHGVAVHLWAVQAADGDYNQSEDLVAEADERRVLD 171

Query: 168 YLKNEIARDPDEDK 181
             +  I R     +
Sbjct: 172 --RAWITRAVRAKE 183


>gi|239931834|ref|ZP_04688787.1| hypothetical protein SghaA1_26677 [Streptomyces ghanaensis ATCC
           14672]
 gi|291440202|ref|ZP_06579592.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
 gi|291343097|gb|EFE70053.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
          Length = 403

 Score = 62.7 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/175 (13%), Positives = 54/175 (30%), Gaps = 26/175 (14%)

Query: 5   REKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSRAI------VIRAYYYT 50
            ++  + +D   L  ++              +D+  L++  R RA       ++R Y++ 
Sbjct: 1   MDRCIVLVDAGYLLGAAASLLAGEPSRSRITVDHAALIQGLRERAESDTRQPLLRIYWFD 60

Query: 51  TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110
                  Q                      V          +  +  +D  +  +  E +
Sbjct: 61  GAPDRVPQ---------PEHRRLRVMPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELA 111

Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162
                  +V+ +GDG     + A +     V + +   +D     S+ L  +AD 
Sbjct: 112 RNRACSDIVLVTGDGDLLPGMMAAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 166


>gi|327403774|ref|YP_004344612.1| hypothetical protein Fluta_1784 [Fluviicola taffensis DSM 16823]
 gi|327319282|gb|AEA43774.1| hypothetical protein Fluta_1784 [Fluviicola taffensis DSM 16823]
          Length = 209

 Score = 62.7 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 62/179 (34%), Gaps = 25/179 (13%)

Query: 7   KIALFIDGANLYASSKALGFD-------IDYRKLLKAFRSR----AIVIRAYYYTTVV-- 53
           K++  IDG NLY S + L  +       +D + LL ++       A   + +Y+T +   
Sbjct: 2   KVSFLIDGFNLYHSIEDLEKNNGIKAKWLDIKTLLHSYMGAIGGTAKFEKIFYFTALRLH 61

Query: 54  --GDPEQQFSPLHPLLDWLHYNGFQVVA---KVAKEFT---ENCGRKRVKSSMDVELAVD 105
              +           +  L   G + +    K  + F            +   DV +A  
Sbjct: 62  VQKEKPNSIERHKRYIAALETKGIEAIYGGFKPKEVFCKKCNETFETFEEKKTDVAIASK 121

Query: 106 AFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162
             E +     + + I SGD      +   ++   K+ I+          +D+L+   D 
Sbjct: 122 IIELAAKAMCDVIAIVSGDTDLIPAIELAKQINPKIKIIVF--FPYKRTNDELKIYTDQ 178


>gi|218780432|ref|YP_002431750.1| hypothetical protein Dalk_2589 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218761816|gb|ACL04282.1| conserved hypothetical protein [Desulfatibacillum alkenivorans
           AK-01]
          Length = 207

 Score = 62.7 bits (151), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 63/180 (35%), Gaps = 24/180 (13%)

Query: 7   KIALFIDGANLYASSKA--LGFDIDYRKLLK-AFRSRAIVIRAYYYTTVVGDPEQQFS-- 61
           + +++IDG NLY  +        +D ++L     + + ++    Y+T +V          
Sbjct: 2   RTSVYIDGFNLYYRALRGTPYKWLDLKQLAANLLQPKHVITEIKYFTAIVSGIFDPRQPI 61

Query: 62  PLHPLLDWLHYNGFQVVAK---------------VAKEFTENCGRKRVKSSMDVELAVDA 106
                +  L     +V                  +A+  +     K  +   DV LAV  
Sbjct: 62  RQKTYIRALESYIPEVSVHYGHFLSHTVSLPQSPLAQPPSFAKVIKTEEKGSDVNLAVHL 121

Query: 107 FEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
              +  +  +  ++ S D      +  ++ +  K+  +          S +L++ A +F+
Sbjct: 122 LNDAWLDKYDCAIVISNDSDLAEPLRLIREQNGKLLGL-LSPLVQGHPSQELQKHA-HFV 179


>gi|297199039|ref|ZP_06916436.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
 gi|297147270|gb|EFH28556.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
          Length = 406

 Score = 62.3 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/175 (13%), Positives = 53/175 (30%), Gaps = 26/175 (14%)

Query: 5   REKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSR------AIVIRAYYYT 50
            ++  + +D   L  ++              +D+  L++  R R        ++R Y++ 
Sbjct: 1   MDRCIVLVDAGYLLGAAASLLAGEPSRSRITVDHAALVQGLRDRAESDTERPLLRIYWFD 60

Query: 51  TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110
                  Q                      V          +  +  +D  +  +  E +
Sbjct: 61  GAPDRVPQ---------PEHRRLRVMPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELA 111

Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162
                  +V+ +GDG     + A +     V + +   +D     S+ L  +AD 
Sbjct: 112 RNRACSDIVLVTGDGDLLPGMMAAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 166


>gi|325290777|ref|YP_004266958.1| protein of unknown function DUF88 [Syntrophobotulus glycolicus DSM
           8271]
 gi|324966178|gb|ADY56957.1| protein of unknown function DUF88 [Syntrophobotulus glycolicus DSM
           8271]
          Length = 274

 Score = 62.3 bits (150), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 60/176 (34%), Gaps = 25/176 (14%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA-----IVIRAYYYTTVVGDPEQQ 59
            + +A FID  N++      G  I     ++A    A      +   + Y     +   +
Sbjct: 1   MKAVA-FIDYENIWTGLAEKGCRIMPEVFIEALHKYAQSIDVELSVIFLYANFDKEEFWR 59

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS----EGLEH 115
              +             ++ +           +   ++ D EL ++A E      +  + 
Sbjct: 60  MQTVF--------EKKSIITRHVYGKNSFAQTELRPNAADHELMLEAQEILLTRPDSFDI 111

Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA---DYFMDLAY 168
            ++F+GDG F +LV  ++   KKV I+             L       D F++L  
Sbjct: 112 FLLFTGDGDFMSLVRKIRAWGKKVKII----GVKGKIHHDLEPFCESMDVFLELTK 163


>gi|220935117|ref|YP_002514016.1| hypothetical protein Tgr7_1948 [Thioalkalivibrio sp. HL-EbGR7]
 gi|219996427|gb|ACL73029.1| hypothetical protein Tgr7_1948 [Thioalkalivibrio sp. HL-EbGR7]
          Length = 199

 Score = 62.3 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 48/163 (29%), Gaps = 17/163 (10%)

Query: 5   REKIALFIDGANLYASSKALG----FDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
            + + +F+D  NL+      G    + +D+ +LL A    A     +  +  +       
Sbjct: 28  NDSVHVFVDDQNLFWGVLNSGQSRGYRVDFGRLLTAASRDASGKTRFVKSAYIAGVIPDD 87

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLE---HLV 117
                        GF V     + +    G  +     D  L  +        +    +V
Sbjct: 88  DS---FWKIAENQGFTVR----RGYLSGAGGGQRSKQDDAYLITEITSTLYEHQGPSTIV 140

Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS---MASDQLR 157
           + +GD  +   +     K  +V +        S     S   R
Sbjct: 141 LVAGDADYVPPLIRANEKGWRVEVAFIDRGLSSALDAVSHLFR 183


>gi|153809371|ref|ZP_01962039.1| hypothetical protein BACCAC_03685 [Bacteroides caccae ATCC 43185]
 gi|149127957|gb|EDM19179.1| hypothetical protein BACCAC_03685 [Bacteroides caccae ATCC 43185]
          Length = 192

 Score = 62.3 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 37/114 (32%), Gaps = 16/114 (14%)

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVI 118
             L    D      F++V        +     + K++ D+ L +DA +      +    +
Sbjct: 7   KKLSGWKDAARDYSFRMV--------QASSFVQGKNTTDIALVMDAMDILHEGRVGCFCL 58

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
            + DG +T L   ++     V                L R    F+ LA  K E
Sbjct: 59  VASDGDYTLLAQRIRESGLMVLGYGEGK-----TPVALVRSCTGFL-LADRKEE 106


>gi|254382567|ref|ZP_04997925.1| conserved hypothetical protein [Streptomyces sp. Mg1]
 gi|194341470|gb|EDX22436.1| conserved hypothetical protein [Streptomyces sp. Mg1]
          Length = 431

 Score = 62.3 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/175 (13%), Positives = 54/175 (30%), Gaps = 26/175 (14%)

Query: 5   REKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSRAI------VIRAYYYT 50
            ++  + +D   L  ++              +D+  L++  R RA       ++R Y++ 
Sbjct: 1   MDRCVVLVDAGYLLGAAASLLAGEPSRSRITVDHAALIQGLRERAEADTEQPLLRIYWFD 60

Query: 51  TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110
                  Q                      V          +  +  +D  +  +  E +
Sbjct: 61  GAPDRVPQ---------PEHRRLRVMPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELA 111

Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162
                  +V+ +GDG     + + +     V + +   +D     S+ L  +AD 
Sbjct: 112 RNRACSDVVLVTGDGDLLPGLMSAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 166


>gi|320011309|gb|ADW06159.1| hypothetical protein Sfla_4758 [Streptomyces flavogriseus ATCC
           33331]
          Length = 417

 Score = 62.3 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/175 (13%), Positives = 54/175 (30%), Gaps = 26/175 (14%)

Query: 5   REKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSRAI------VIRAYYYT 50
            ++  + +D   L  ++              +D+  L++  R RA       ++R Y++ 
Sbjct: 1   MDRCVVLVDAGYLLGAAASLLAGEPARSRITVDHTALIQGLRERAEADTEQPLLRIYWFD 60

Query: 51  TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110
                  Q                      V          +  +  +D  +  +  E +
Sbjct: 61  GAPDRVPQ---------PEHRRLRVMPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELA 111

Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162
                  +V+ +GDG     + + +     V + +   +D     S+ L  +AD 
Sbjct: 112 RNRACSDVVLVTGDGDLLPGLMSAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 166


>gi|51102980|gb|AAT96127.1| hypothetical protein [Pseudomonas viridiflava]
          Length = 186

 Score = 62.3 bits (150), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 60/195 (30%), Gaps = 49/195 (25%)

Query: 11  FIDGANLYASSKALG------------------------FDIDYRKLLKAFRSRAIVIRA 46
           ++D +N++   +                           +++DY  L +     A  I  
Sbjct: 11  YVDNSNVFLEGRRASAVAKKLLGAESYIEAMNNRILDNTWNLDYGLLHQFACGDAENIGG 70

Query: 47  YYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELA--- 103
                     +            +   GF+V                 +  +DV +A   
Sbjct: 71  AKLWGSPPPSDS-------FWHMVESKGFEVKT-------YEKNFAGKEKKVDVAIAHQI 116

Query: 104 -VDAFE--QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160
             DA+    S+G + + + +GD  F  +V  L     +V +V         A+ +L+   
Sbjct: 117 TKDAYSGKISKGTDEITLVAGDKDFVPVVEDLVENGYQVHVV-----FWENAAPELKVVC 171

Query: 161 DYFMDLAYLKNEIAR 175
             F+ L    + + +
Sbjct: 172 SKFISLNPYLDNLTK 186


>gi|318057577|ref|ZP_07976300.1| hypothetical protein SSA3_06549 [Streptomyces sp. SA3_actG]
          Length = 436

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 23/174 (13%), Positives = 55/174 (31%), Gaps = 26/174 (14%)

Query: 6   EKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSRAI------VIRAYYYTT 51
           ++  + +D   L  ++              +D+  L++  R RA       ++R Y++  
Sbjct: 5   DRCVVLVDAGYLLGAAASLLAGDPSRSRITVDHAALIQRLRERAEEETGQPLLRIYWFDG 64

Query: 52  VVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE 111
                 Q                 +    V          +  +  +D  +  +  E + 
Sbjct: 65  APDRVPQ---------PEHRRLRVRPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELAR 115

Query: 112 G--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162
                 +V+ +GDG     + + +     V + +   +D     S+ L  +AD 
Sbjct: 116 NRACSDIVLVTGDGDLLPGLVSAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 169


>gi|163783250|ref|ZP_02178244.1| hypothetical protein HG1285_14539 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881584|gb|EDP75094.1| hypothetical protein HG1285_14539 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 205

 Score = 61.6 bits (148), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 71/207 (34%), Gaps = 39/207 (18%)

Query: 5   REKIALFIDGANLYASSKALGFDI----------DYRKLL----KAFRSRAIVIRAYYYT 50
            +K+A+ +D  NL  + +                D  KLL            V R ++Y 
Sbjct: 1   MKKVAILVDWENLRKTLERAFKKFRISPDKFSYNDVDKLLLFIMSLLEEDEEVYRIFFYV 60

Query: 51  TVVG------------DPEQQFSPLH----PLLDWLHYNGFQVVAKVAKEFTENCGRK-- 92
           +               D ++++  ++      L+ L       + K   EF     +   
Sbjct: 61  SEPPKEARWRSATYSIDMDEKYRKIYENAVTFLESLKTKDLVSIRKGKLEFRGYNSQNKP 120

Query: 93  -RVKSSMDVELAVDA--FEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDP 149
              +  +D+ + +D         ++ +++FS D      +   +    +V I +      
Sbjct: 121 LFTQKQVDMLIGLDMAHLSYLRLVDRVMVFSLDKDLIPALKIARVNGLQVIIPT--YKGL 178

Query: 150 SMASDQLRRQAD--YFMDLAYLKNEIA 174
             AS +L+  AD   ++DLA     I+
Sbjct: 179 RQASPELQEHADFIRYVDLAERLRNIS 205


>gi|317132837|ref|YP_004092151.1| hypothetical protein Ethha_1898 [Ethanoligenens harbinense YUAN-3]
 gi|315470816|gb|ADU27420.1| hypothetical protein Ethha_1898 [Ethanoligenens harbinense YUAN-3]
          Length = 180

 Score = 61.6 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 38/191 (19%), Positives = 68/191 (35%), Gaps = 40/191 (20%)

Query: 10  LFIDGANL-----YASSKALG-----------------FDIDYRKLLKAFRSRAI--VIR 45
           +++D +N+     Y S+   G                 +  D+ KLL          + R
Sbjct: 5   VYVDNSNVWIEGKYYSAVKKGMVANIFDAHENKICDMPWGYDFGKLLNISCEGDENSLKR 64

Query: 46  AYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVD 105
           A  Y +   D +  +       +     GF+V      E       KRV +  D E+  D
Sbjct: 65  AVLYGSKPTDNDSLW-------NAARRFGFEVYHP---ERNVKNKEKRVDTGFDKEVLKD 114

Query: 106 AF-EQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
            +       +++++ +GD     +  A+  +  K T+V         AS+ L+  A  F+
Sbjct: 115 LYKSVIGHDDNIILVAGDADHVPVAEAIVEEGMKFTLV-----FWDNASETLKNMASKFI 169

Query: 165 DLAYLKNEIAR 175
            L     EI R
Sbjct: 170 SLNNYIAEITR 180


>gi|149184904|ref|ZP_01863221.1| hypothetical protein ED21_17662 [Erythrobacter sp. SD-21]
 gi|148831015|gb|EDL49449.1| hypothetical protein ED21_17662 [Erythrobacter sp. SD-21]
          Length = 205

 Score = 61.6 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 47/141 (33%), Gaps = 19/141 (13%)

Query: 11  FIDGANLYASSKAL----GFDIDYRKLLKAFRSRA----IVIRAYYYTTVVGDPEQQFSP 62
           FIDG NL+  +K L      + D   L +     A      +R Y          +    
Sbjct: 13  FIDGQNLFKQAKRLFGHREPNFDPVALHREVSRMAGFAPGPVRVYTGIPAANRQPRWHLF 72

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTEN---------CGRKRVKSSMDVELAVDAFEQSEG- 112
            +  +  +   G  V  +  +                 +  +  +D+ +A+D    +   
Sbjct: 73  WNNKIQAMKRAGVTVTTRPLRYRKRQLFDEDGEVETITQAEEKGIDIRIALDLVRMARRE 132

Query: 113 -LEHLVIFSGDGCFTTLVAAL 132
            L+  +I+S D     +V+ +
Sbjct: 133 ELDAAIIYSQDQDLNEVVSEI 153


>gi|239987029|ref|ZP_04707693.1| hypothetical protein SrosN1_06957 [Streptomyces roseosporus NRRL
           11379]
          Length = 417

 Score = 61.6 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 23/175 (13%), Positives = 54/175 (30%), Gaps = 26/175 (14%)

Query: 5   REKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSRAI------VIRAYYYT 50
            ++  + +D   L  ++              +D+  L++  R RA       ++R Y++ 
Sbjct: 1   MDRCVVLVDAGYLLGAAASLLAGEPARSRITVDHAALIQGLRERAEADTQQPLLRIYWFD 60

Query: 51  TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110
                  Q                      V          +  +  +D  +  +  E +
Sbjct: 61  GAPDRVPQ---------PEHRRLRVMPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELA 111

Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162
                  +V+ +GDG     + + +     V + +   +D     S+ L  +AD 
Sbjct: 112 RNRACSDVVLVTGDGDLLPGLMSAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 166


>gi|302533928|ref|ZP_07286270.1| conserved hypothetical protein [Streptomyces sp. C]
 gi|302442823|gb|EFL14639.1| conserved hypothetical protein [Streptomyces sp. C]
          Length = 425

 Score = 61.6 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 23/175 (13%), Positives = 54/175 (30%), Gaps = 26/175 (14%)

Query: 5   REKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSRAI------VIRAYYYT 50
            ++  + +D   L  ++              +D+  L++  R RA       ++R Y++ 
Sbjct: 1   MDRCVVLVDAGYLLGAAASLLAGEPSRSRITVDHSALIQGLRERAEADTQQPLLRIYWFD 60

Query: 51  TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110
                  Q                      V          +  +  +D  +  +  E +
Sbjct: 61  GAPDRVPQ---------PEHRRLRVMPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELA 111

Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162
                  +V+ +GDG     + + +     V + +   +D     S+ L  +AD 
Sbjct: 112 RNRACSDVVLVTGDGDLLPGLMSAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 166


>gi|289772213|ref|ZP_06531591.1| conserved hypothetical protein [Streptomyces lividans TK24]
 gi|289702412|gb|EFD69841.1| conserved hypothetical protein [Streptomyces lividans TK24]
          Length = 406

 Score = 61.6 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 24/174 (13%), Positives = 54/174 (31%), Gaps = 26/174 (14%)

Query: 6   EKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSRAI------VIRAYYYTT 51
           ++  + +D   L  ++              +D+  L++  R RA       ++R Y++  
Sbjct: 5   DRCIVLVDAGYLLGAAASLLAGEPSRSRITVDHAALIQGLRDRAESDTQQPLLRIYWFDG 64

Query: 52  VVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE 111
                 Q                      V          +  +  +D  +  +  E + 
Sbjct: 65  APDRVPQ---------PEHRRLRVMPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELAR 115

Query: 112 G--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162
                 +V+ +GDG     + A +     V + +   +D     S+ L  +AD 
Sbjct: 116 NRACSDVVLVTGDGDLLPGMMAAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 169


>gi|114570762|ref|YP_757442.1| hypothetical protein Mmar10_2212 [Maricaulis maris MCS10]
 gi|114341224|gb|ABI66504.1| conserved hypothetical protein [Maricaulis maris MCS10]
          Length = 201

 Score = 61.6 bits (148), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/180 (19%), Positives = 61/180 (33%), Gaps = 36/180 (20%)

Query: 7   KIALFIDGANLYASSKALG--FDIDYRKLLKA--FRSRAIVIRAYYYTTVV--------- 53
           K+A+ IDG      ++  G  ++ D+ + L       R  ++RA YY             
Sbjct: 2   KVAVLIDGGFTRVLARKDGHSYNPDFIENLAHCVVSDRETLLRALYYDCEPFTGTVQLPV 61

Query: 54  GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRK----------------RVKSS 97
              +++FS     LD L    F  V K   +F     RK                  +  
Sbjct: 62  SGEDKEFSKSGKWLDDLARKDFFAVRKGVLKFRGFKPRKIPVSGRALSDQDFAPDFEQKG 121

Query: 98  MDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQ 155
           +D+ + +D    S    +E +V+ S D      +   ++   +      VL  P   S  
Sbjct: 122 VDMRIGLDMATLSNGPKVERIVLISNDTDCVPAMKHARKAGVQ-----LVLGVPPNQSPA 176


>gi|302347101|ref|YP_003815399.1| hypothetical protein HMPREF0659_A7383 [Prevotella melaninogenica
           ATCC 25845]
 gi|302151044|gb|ADK97305.1| conserved hypothetical protein [Prevotella melaninogenica ATCC
           25845]
          Length = 256

 Score = 61.2 bits (147), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 56/173 (32%), Gaps = 26/173 (15%)

Query: 6   EKIALFIDGANLYASSKALG---------FDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP 56
           +++  + DG N Y + K            + +D     ++F     V+    Y T     
Sbjct: 44  KRVTFYFDGFNFYFALKRKKKISPEWKDFYWLDLVAFCESFLGPDQVLEKVIYFTASPLS 103

Query: 57  EQQFSPLHPLLDWLH---YNGFQVVAKVAK------EFTENCGRKRVKSSMDVELAVDAF 107
            Q+ S     L+       + F+V+            + +    K  +   DV ++V   
Sbjct: 104 PQKNSRQSAFLNANRILHSDKFEVIRGKYMSKQIECPYCKYSISKPEEKRTDVNISVRMM 163

Query: 108 EQS--EGLEHLVIFSGDGCFTTLVAALQRK--VKKVTIVSTVLSDPSMASDQL 156
                +  + +V+ S D      +  +      KKV +       P   + +L
Sbjct: 164 ADCVQDKTDVIVLISADTDLIPPLNFIHTNYPNKKVKVF----FPPGSHALEL 212


>gi|302383830|ref|YP_003819653.1| hypothetical protein Bresu_2723 [Brevundimonas subvibrioides ATCC
           15264]
 gi|302194458|gb|ADL02030.1| conserved hypothetical protein [Brevundimonas subvibrioides ATCC
           15264]
          Length = 256

 Score = 61.2 bits (147), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 48/168 (28%), Gaps = 13/168 (7%)

Query: 5   REKIALFIDGANLYASSKALGFD----IDYRKLLKAFRSRAI-VIRAYYYTTVVGDPEQQ 59
           R++  L++DG NL+ +   L       +D   L +A       +  A + +      + +
Sbjct: 25  RKRARLYVDGFNLHHAILDLNRHELLWLDLMALGRALLPPGERLTGAVWVSAHRPQRKDR 84

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCG------RKRVKSSMDVELAVDAFEQSE-- 111
              +      L     + +        ++C           +   DV LA+     +   
Sbjct: 85  MQAMMAYEAALVARDVRCLMGHFVVHGDHCHACGHQWMDATEKQSDVNLALSIAADAAAD 144

Query: 112 GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQ 159
             +   I + DG        L        IVS            L   
Sbjct: 145 RFDTAYIVTTDGDHAATTRFLHESYPHKRIVSVAPPGRGHNRQLLEWA 192


>gi|326779887|ref|ZP_08239152.1| Domain of unknown function DUF88 protein [Streptomyces cf. griseus
           XylebKG-1]
 gi|326660220|gb|EGE45066.1| Domain of unknown function DUF88 protein [Streptomyces cf. griseus
           XylebKG-1]
          Length = 418

 Score = 60.8 bits (146), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 23/175 (13%), Positives = 54/175 (30%), Gaps = 26/175 (14%)

Query: 5   REKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSRAI------VIRAYYYT 50
            ++  + +D   L  ++              +D+  L++  R RA       ++R Y++ 
Sbjct: 1   MDRCVVLVDAGYLLGAAASLLAGEPARSRITVDHAALIQGLRERAEADTQQPLLRIYWFD 60

Query: 51  TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110
                  Q                      V          +  +  +D  +  +  E +
Sbjct: 61  GAPDRVPQ---------PEHRRLRVMPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELA 111

Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162
                  +V+ +GDG     + + +     V + +   +D     S+ L  +AD 
Sbjct: 112 RNRACSDVVLVTGDGDLLPGLMSAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 166


>gi|333027817|ref|ZP_08455881.1| hypothetical protein STTU_5321 [Streptomyces sp. Tu6071]
 gi|332747669|gb|EGJ78110.1| hypothetical protein STTU_5321 [Streptomyces sp. Tu6071]
          Length = 434

 Score = 60.8 bits (146), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 23/174 (13%), Positives = 55/174 (31%), Gaps = 26/174 (14%)

Query: 6   EKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSRAI------VIRAYYYTT 51
           ++  + +D   L  ++              +D+  L++  R RA       ++R Y++  
Sbjct: 5   DRCVVLVDAGYLLGAAASLLAGDPSRSRITVDHAALIQRLRERAEEETGQPLLRIYWFDG 64

Query: 52  VVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE 111
                 Q                 +    V          +  +  +D  +  +  E + 
Sbjct: 65  APDRVPQ---------PEHRRLRVRPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELAR 115

Query: 112 G--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162
                 +V+ +GDG     + + +     V + +   +D     S+ L  +AD 
Sbjct: 116 NRACSDVVLVTGDGDLLPGLVSAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 169


>gi|326440583|ref|ZP_08215317.1| hypothetical protein SclaA2_05933 [Streptomyces clavuligerus ATCC
           27064]
          Length = 410

 Score = 60.8 bits (146), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 21/175 (12%), Positives = 52/175 (29%), Gaps = 26/175 (14%)

Query: 5   REKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRS------RAIVIRAYYYT 50
            ++  + +D   L  ++              +D+  L++  R          ++R Y++ 
Sbjct: 1   MDRCVVLVDAGYLLGAAASLLAGEPARSRITVDHTALIQGLRELAERDTERPLLRIYWFD 60

Query: 51  TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110
                  Q                      V          +  +  +D  +  +  E +
Sbjct: 61  GAPDRVPQ---------PEHRRLRVMPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELA 111

Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162
                  +V+ +GDG     + + +     V + +   +D     S+ L  +AD 
Sbjct: 112 RNRACSDVVLVTGDGDLLPGLMSAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 166


>gi|290961181|ref|YP_003492363.1| hypothetical protein SCAB_68271 [Streptomyces scabiei 87.22]
 gi|260650707|emb|CBG73823.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
          Length = 407

 Score = 60.8 bits (146), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 23/175 (13%), Positives = 53/175 (30%), Gaps = 26/175 (14%)

Query: 5   REKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSR------AIVIRAYYYT 50
            ++  + +D   L  ++              +D+  L++  R R        ++R Y++ 
Sbjct: 1   MDRCIVLVDAGYLLGAAASLLAGEPSRSRITVDHAALIQGLRERAEADTERPLLRIYWFD 60

Query: 51  TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110
                  Q                      V          +  +  +D  +  +  E +
Sbjct: 61  GAPDRVPQ---------PEHRRLRVMPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELA 111

Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162
                  +V+ +GDG     + A +     V + +   +D     S+ L  +AD 
Sbjct: 112 RNRACSDVVLVTGDGDLLPGMMAAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 166


>gi|225619659|ref|YP_002720916.1| hypothetical protein BHWA1_00718 [Brachyspira hyodysenteriae WA1]
 gi|225214478|gb|ACN83212.1| hypothetical protein BHWA1_00718 [Brachyspira hyodysenteriae WA1]
          Length = 364

 Score = 60.8 bits (146), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 64/170 (37%), Gaps = 19/170 (11%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
            ++I ++ID  N+      L +++++ ++     S        +Y   + D E  +S   
Sbjct: 1   MKRIGIYIDLENVSH----LSYEVNFEQMFNNIFS--------FYKNNLKDKEIVYSIKK 48

Query: 65  PLLDWLHYNGFQVVAKV-AKEFTENCGRKRVKSSMDVELAVDAFE---QSEGLEHLVIFS 120
              D      +    +    +   +    + K+  D+  ++DAFE    ++ ++  +  S
Sbjct: 49  AYGDAKSIKKYSKNLRDMHIDIVYSVPVNKAKNMADMISSIDAFEDFVINKKIDIAIFVS 108

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
            D  +T ++  L R    V IV+   +         +   ++   +   K
Sbjct: 109 RDVDYTVVMDRLSRYGAIVGIVTVFDNSKRNI---FKTSCNHIFKIEDYK 155


>gi|302550773|ref|ZP_07303115.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM
           40736]
 gi|302468391|gb|EFL31484.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM
           40736]
          Length = 406

 Score = 60.8 bits (146), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 24/174 (13%), Positives = 54/174 (31%), Gaps = 26/174 (14%)

Query: 6   EKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSRAI------VIRAYYYTT 51
           ++  + +D   L  ++              +D+  L++  R RA       ++R Y++  
Sbjct: 5   DRCIVLVDAGYLLGAAASLLAGEPSRSRITVDHAALIQGLRERAESDTQQPLLRIYWFDG 64

Query: 52  VVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE 111
                 Q                      V          +  +  +D  +  +  E + 
Sbjct: 65  APDRVPQ---------PEHRRLRVMPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELAR 115

Query: 112 G--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162
                 +V+ +GDG     + A +     V + +   +D     S+ L  +AD 
Sbjct: 116 NRACSDVVLVTGDGDLLPGMMAAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 169


>gi|307331652|ref|ZP_07610759.1| protein of unknown function DUF88 [Streptomyces violaceusniger Tu
           4113]
 gi|306882678|gb|EFN13757.1| protein of unknown function DUF88 [Streptomyces violaceusniger Tu
           4113]
          Length = 227

 Score = 60.4 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/175 (13%), Positives = 54/175 (30%), Gaps = 26/175 (14%)

Query: 5   REKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSRAI------VIRAYYYT 50
            ++  + +D   L  ++              +D+  L++  R RA       ++R Y++ 
Sbjct: 1   MDRCVVLVDAGYLLGAAASLLAGEPARSRISVDHATLIQGLRERAEAETECPLLRIYWFD 60

Query: 51  TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110
                  Q                      V          +  +  +D  +  +  E +
Sbjct: 61  GAPDRVPQ---------PEHRRLRVMPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELA 111

Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162
                  +V+ +GDG     + + +     V + +   +D     S+ L  +AD 
Sbjct: 112 RNRACADIVLVTGDGDLLPGLMSAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 166


>gi|301117790|ref|XP_002906623.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262107972|gb|EEY66024.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 564

 Score = 60.4 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 71/190 (37%), Gaps = 19/190 (10%)

Query: 6   EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRA--IVIRAYYYTTVVGDPEQQFSPL 63
           +  AL IDGA      ++LG +ID+ +L       A       +Y+ +   D        
Sbjct: 13  KTTALIIDGAYARIHGRSLGGNIDFSRLRTELEEIASTEFDECWYFDSQRRDAPGNSQLA 72

Query: 64  HPLLD--WLHYNGFQVV-----AKVAKEFTENCGRKR---VKSSMDVELA--VDAFEQSE 111
                  +    G Q+       K       +CG K    V+  +D  +A  +     + 
Sbjct: 73  SEFHALKYARPRGPQLQVEIYSTKPRSCKCTSCGHKFNQNVQKGVDNGIATKLLTLTLTR 132

Query: 112 GLEHLVIFSGDGCFTTLVAALQ-RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
            +E +++ SGDG F T +  ++    ++V +V  + +     S  L++ A   M +  + 
Sbjct: 133 NIERVILVSGDGDFYTSLRYVRNELAREVWVVGFLDTV----SGDLQQLASQIMWIDEMW 188

Query: 171 NEIARDPDED 180
            +  +     
Sbjct: 189 GDATKREATT 198


>gi|296171006|ref|ZP_06852490.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295894402|gb|EFG74150.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 214

 Score = 60.4 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 59/166 (35%), Gaps = 19/166 (11%)

Query: 8   IALFIDGANLYAS----SKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
           +A+++DG NLY      S      +D   L +  R ++ + +  Y+T  V +     +  
Sbjct: 13  LAVYVDGFNLYHGLHEASGRKHLWLDVVALAQNLRPQSSLAKVMYFTAPVLNDSGGLARQ 72

Query: 64  HPLLDWLHYNG----------FQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG- 112
              L+ L              +Q   K  K+      R   +   DV +A++    +   
Sbjct: 73  QRYLNALKAQNPGVIEIVEGRYQQKNKTCKKCGNTW-RTYEEKETDVNIAINLVADASIK 131

Query: 113 -LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLR 157
             +  +I S D      V   ++    + + +     P    ++L+
Sbjct: 132 LTDAALIISADSDLAPGVKLARKLNPNLFVAA--AFPPRRVCNELK 175


>gi|218779797|ref|YP_002431115.1| cold-shock DNA-binding domain protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218761181|gb|ACL03647.1| cold-shock DNA-binding domain protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 409

 Score = 60.4 bits (145), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 69/197 (35%), Gaps = 31/197 (15%)

Query: 7   KIALFIDGANLYASSKALGF------DIDYRKLLKAFR-----------SRAIVIRAYYY 49
           +I +F DG   Y  S    +       +    + +  +               V+ A+Y+
Sbjct: 11  RIGVFYDGNFFYHVSNYYKYVHPRRARLSVAGIHEFIKSQVAESEGVDPRYCQVVDAHYF 70

Query: 50  TTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ 109
              +G  E +   +            +++ +            R +  +DV LA++AFE 
Sbjct: 71  RGRLGAQEAEQRQVLM----SERVFDEILMREGIVTHYLPLGARGEKGIDVWLALEAFEL 126

Query: 110 S--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS--TVLSDPSM------ASDQLRRQ 159
           +  +    +V+ +GDG +  L+  +     ++ ++      +D          S  L  Q
Sbjct: 127 TVLKHFNVVVLIAGDGDYVPLIRKINTLGTRIMVLGWDFEYTDNQNNKRRTVTSVNLLDQ 186

Query: 160 ADYFMDLAYLKNEIARD 176
             Y + +  L ++  R 
Sbjct: 187 VTYPILMHTLIDDKTRR 203


>gi|282862137|ref|ZP_06271200.1| protein of unknown function DUF88 [Streptomyces sp. ACTE]
 gi|282563162|gb|EFB68701.1| protein of unknown function DUF88 [Streptomyces sp. ACTE]
          Length = 415

 Score = 60.0 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/175 (13%), Positives = 54/175 (30%), Gaps = 26/175 (14%)

Query: 5   REKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSRAI------VIRAYYYT 50
            ++  + +D   L  ++              +D+  L++  R RA       ++R Y++ 
Sbjct: 1   MDRCVVLVDAGYLLGAAASLLAGEPARSRITVDHAALIQGLRLRAEADTEQPLLRIYWFD 60

Query: 51  TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110
                  Q                      V          +  +  +D  +  +  E +
Sbjct: 61  GAPDRVPQ---------PEHRRLRVMPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELA 111

Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162
                  +V+ +GDG     + + +     V + +   +D     S+ L  +AD 
Sbjct: 112 RNRACSDVVLVTGDGDLLPGLMSAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 166


>gi|256832383|ref|YP_003161110.1| hypothetical protein Jden_1151 [Jonesia denitrificans DSM 20603]
 gi|256685914|gb|ACV08807.1| hypothetical protein Jden_1151 [Jonesia denitrificans DSM 20603]
          Length = 388

 Score = 60.0 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 57/181 (31%), Gaps = 22/181 (12%)

Query: 5   REKIALFIDGANLY--------ASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDP 56
            ++ A+F+D   L+        A+S      + Y  L++         RA+     +   
Sbjct: 2   NKQSAIFVDAGFLHSVGAQRTAATSYRHAVKLQYSTLIRGIT---HTTRAHSGVENLRTY 58

Query: 57  EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LE 114
               S    L D         +    K           +  +D+ LA+D    +      
Sbjct: 59  WYDASRDGLLTDEHKRIA---MIPGVKVRLGRVNYYGEQKGVDLRLALDLVGLARTGAAS 115

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
              + SGD   T  V   Q    +V ++        +    L   AD   +LA+  + I 
Sbjct: 116 VAYLISGDDDLTEAVEEAQSLGMRVVLLGIDDKSSRI---GLASVAD---NLAFAVDAIE 169

Query: 175 R 175
           R
Sbjct: 170 R 170


>gi|318078652|ref|ZP_07985984.1| hypothetical protein SSA3_18541 [Streptomyces sp. SA3_actF]
          Length = 229

 Score = 60.0 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/174 (13%), Positives = 55/174 (31%), Gaps = 26/174 (14%)

Query: 6   EKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSRAI------VIRAYYYTT 51
           ++  + +D   L  ++              +D+  L++  R RA       ++R Y++  
Sbjct: 5   DRCVVLVDAGYLLGAAASLLAGDPSRSRITVDHAALIQRLRERAEEETGQPLLRIYWFDG 64

Query: 52  VVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE 111
                 Q                 +    V          +  +  +D  +  +  E + 
Sbjct: 65  APDRVPQ---------PEHRRLRVRPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELAR 115

Query: 112 G--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162
                 +V+ +GDG     + + +     V + +   +D     S+ L  +AD 
Sbjct: 116 NRACSDIVLVTGDGDLLPGLVSAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 169


>gi|288561663|ref|YP_003429069.1| hypothetical protein BpOF4_20909 [Bacillus pseudofirmus OF4]
 gi|288548295|gb|ADC52177.1| hypothetical protein BpOF4_20909 [Bacillus pseudofirmus OF4]
          Length = 191

 Score = 60.0 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 59/177 (33%), Gaps = 12/177 (6%)

Query: 7   KIALFIDGANLYASS------KALGFDIDYRKLLKAFRSRA-IVIRAYYYTTVVGDPEQQ 59
           K A+ +D  N  ++           +   +  +    +     +   Y     V   +  
Sbjct: 2   KAAILVDEQNAMSTMHLMDVKGLTRWKTFFDAIHHVVKRDYPTLQMDYCMYGAVVPKKVN 61

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS-EGLEHLVI 118
           +S       + H      +         N      +  +DVELA+D ++++ EG E L++
Sbjct: 62  YSLHEKRRRFFHSLSKDQIKVSLGYCLLNAQGVMTEKGVDVELALDIYQKALEGYELLIV 121

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
           FSGD      +   +    KV  V       +  S    +  D  +    + + + +
Sbjct: 122 FSGDSDLVPAIERAKALGTKVVAVLGDNQPATHMS----KVCDATIPFTAIVHLLPK 174


>gi|251772713|gb|EES53276.1| protein of unknown function DUF88 [Leptospirillum
           ferrodiazotrophum]
          Length = 307

 Score = 60.0 bits (144), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 43/119 (36%), Gaps = 7/119 (5%)

Query: 55  DPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTEN----CGRKRVKSSMDVELAVDAFEQS 110
           D  Q+ S                  +  +   E      G    +  +D+ + +D   + 
Sbjct: 128 DEIQKRSSFLEFKYVGQLVLRPYRVREMQRDKEGGILYQGTVEGEKGVDIGITIDMIAKM 187

Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMA---SDQLRRQADYFMDL 166
              +  VI SGD  F  L+  L+ ++K V  +S   ++       S Q++   DYF  +
Sbjct: 188 PHYDAAVIVSGDTDFIPLIQYLKDQLKLVYSLSLSRTENGQVQIFSPQIKSAVDYFHAI 246


>gi|257387927|ref|YP_003177700.1| hypothetical protein Hmuk_1879 [Halomicrobium mukohataei DSM 12286]
 gi|257170234|gb|ACV47993.1| protein of unknown function DUF88 [Halomicrobium mukohataei DSM
           12286]
          Length = 152

 Score = 59.6 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 53/167 (31%), Gaps = 31/167 (18%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
              ++ +F+DG N+        FD+D   + +   +   +     Y              
Sbjct: 15  SEPRVGVFVDGPNV----LRSEFDVDLDDVREEAENWGRLAITRLYV--------DEHAT 62

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEH--LVIFSG 121
             L+      GF+VV                   +DV+LAVDA           L I S 
Sbjct: 63  PGLIQAAEARGFEVVV--------------TSGDVDVKLAVDATAAGADDAIDLLAIVSR 108

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
           D  F  ++ ++  +  +   ++         SD LR  A     L  
Sbjct: 109 DTDFKPVLESVGERGIETLAIAPGEHGR---SDALRNAAQNATTLEE 152


>gi|329940919|ref|ZP_08290199.1| hypothetical protein SGM_5691 [Streptomyces griseoaurantiacus M045]
 gi|329300213|gb|EGG44111.1| hypothetical protein SGM_5691 [Streptomyces griseoaurantiacus M045]
          Length = 406

 Score = 59.6 bits (143), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/174 (13%), Positives = 54/174 (31%), Gaps = 26/174 (14%)

Query: 6   EKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSRAI------VIRAYYYTT 51
           ++  + +D   L  ++              +D+  L++  R RA       ++R Y++  
Sbjct: 5   DRCIVLVDAGYLLGAAASLLAGEPSRSRITVDHAALIQGLRERAESDTRQPLLRIYWFDG 64

Query: 52  VVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE 111
                 Q                      V          +  +  +D  +  +  E + 
Sbjct: 65  APDRVPQ---------PEHRRLRVMPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELAR 115

Query: 112 G--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162
                 +V+ +GDG     + A +     V + +   +D     S+ L  +AD 
Sbjct: 116 NRACSDVVLITGDGDLLPGMMAAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 169


>gi|29832687|ref|NP_827321.1| hypothetical protein SAV_6145 [Streptomyces avermitilis MA-4680]
 gi|29609807|dbj|BAC73856.1| hypothetical protein [Streptomyces avermitilis MA-4680]
          Length = 408

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/174 (13%), Positives = 53/174 (30%), Gaps = 26/174 (14%)

Query: 6   EKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSR------AIVIRAYYYTT 51
           ++  + +D   L  ++              +D+  L++  R R        ++R Y++  
Sbjct: 5   DRCIVLVDAGYLLGAAASLLAGEPSRSRITVDHAALIQGLRERAEFDTERPLLRIYWFDG 64

Query: 52  VVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE 111
                 Q                      V          +  +  +D  +  +  E + 
Sbjct: 65  APDRVPQ---------PEHRRLRVMPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELAR 115

Query: 112 G--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162
                 +V+ +GDG     + A +     V + +   +D     S+ L  +AD 
Sbjct: 116 NRACSDVVLVTGDGDLLPGMMAAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 169


>gi|308177196|ref|YP_003916602.1| hypothetical protein AARI_14200 [Arthrobacter arilaitensis Re117]
 gi|307744659|emb|CBT75631.1| hypothetical protein AARI_14200 [Arthrobacter arilaitensis Re117]
          Length = 335

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 57/193 (29%), Gaps = 38/193 (19%)

Query: 1   MFDPREKIALFIDGANLYA--------SSKALGFDIDYRKLLKAFRS------RAIVIRA 46
           M +     A+FID   L +        ++    F   Y  L++              +R 
Sbjct: 1   MMNQ---TAIFIDAGFLLSLGGHRAAGTTLRSAFTTHYESLVRGIVQTVKKNTGLNNLRV 57

Query: 47  YYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA 106
           Y+Y           S      +     G        K           +  +D+ LA+D 
Sbjct: 58  YWYDA---------SKDGLFTEQHKRIGLIPG---VKVRLGRISYNGEQKGVDLRLALDL 105

Query: 107 FEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM----ASDQLRRQA 160
              +         + SGD      V   Q    KV ++    SD  +     ++ L   A
Sbjct: 106 VGVARNRSASIAYLVSGDDDLAEAVEEAQDLGMKVVLLGVAKSDSRLGVASVAEHLALTA 165

Query: 161 DYFMDLAYLKNEI 173
           D    +  + +++
Sbjct: 166 D---YIETISDQL 175


>gi|170290659|ref|YP_001737475.1| hypothetical protein Kcr_1046 [Candidatus Korarchaeum cryptofilum
           OPF8]
 gi|170174739|gb|ACB07792.1| protein of unknown function DUF88 [Candidatus Korarchaeum
           cryptofilum OPF8]
          Length = 167

 Score = 59.3 bits (142), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/179 (13%), Positives = 56/179 (31%), Gaps = 33/179 (18%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
             +++A+ +DG N+    K LG   D  ++ K       +  A                 
Sbjct: 11  KTKQLAVIVDGPNMLR--KELGT--DLEEIRKLAEREGRIRLAVV--------VLDRKAP 58

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
             L++ +   GF+ +    K   +         +             E ++ +++ +   
Sbjct: 59  EKLVEAVTNAGFKPLISTGKVEVDFSIVCMEAIND------------EKIDMIIMAARSA 106

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL-----AYLKNEIARDP 177
            +  L+   +   K+V I+          S  L++  D ++ L       L      D 
Sbjct: 107 AYMPLIHKAKESGKEVMIIGAEPGF----SVALKKACDQYILLPSSSPEDLAEPEGEDE 161


>gi|182439235|ref|YP_001826954.1| hypothetical protein SGR_5442 [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178467751|dbj|BAG22271.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
           NBRC 13350]
          Length = 421

 Score = 58.9 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/174 (13%), Positives = 54/174 (31%), Gaps = 26/174 (14%)

Query: 6   EKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSRAI------VIRAYYYTT 51
           ++  + +D   L  ++              +D+  L++  R RA       ++R Y++  
Sbjct: 5   DRCVVLVDAGYLLGAAASLLAGEPARSRITVDHAALIQGLRERAEADTQQPLLRIYWFDG 64

Query: 52  VVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE 111
                 Q                      V          +  +  +D  +  +  E + 
Sbjct: 65  APDRVPQ---------PEHRRLRVMPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELAR 115

Query: 112 G--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162
                 +V+ +GDG     + + +     V + +   +D     S+ L  +AD 
Sbjct: 116 NRACSDVVLVTGDGDLLPGLMSAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 169


>gi|294812108|ref|ZP_06770751.1| DUF88 domain-containing protein [Streptomyces clavuligerus ATCC
           27064]
 gi|294324707|gb|EFG06350.1| DUF88 domain-containing protein [Streptomyces clavuligerus ATCC
           27064]
          Length = 413

 Score = 58.9 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/174 (12%), Positives = 52/174 (29%), Gaps = 26/174 (14%)

Query: 6   EKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRS------RAIVIRAYYYTT 51
           ++  + +D   L  ++              +D+  L++  R          ++R Y++  
Sbjct: 5   DRCVVLVDAGYLLGAAASLLAGEPARSRITVDHTALIQGLRELAERDTERPLLRIYWFDG 64

Query: 52  VVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE 111
                 Q                      V          +  +  +D  +  +  E + 
Sbjct: 65  APDRVPQ---------PEHRRLRVMPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELAR 115

Query: 112 G--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162
                 +V+ +GDG     + + +     V + +   +D     S+ L  +AD 
Sbjct: 116 NRACSDVVLVTGDGDLLPGLMSAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 169


>gi|237714047|ref|ZP_04544528.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262407099|ref|ZP_06083648.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294644732|ref|ZP_06722480.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a]
 gi|229445871|gb|EEO51662.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262355802|gb|EEZ04893.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|292639941|gb|EFF58211.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a]
          Length = 122

 Score = 58.9 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 17/122 (13%), Positives = 39/122 (31%), Gaps = 11/122 (9%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLL-----KAFRSRAIVIRAYYYTTVVGDP 56
            + ++K+ +++DG N Y   K+  + + Y   L        +S   ++   Y++    D 
Sbjct: 1   MEDKKKVIVYVDGFNFYYGLKSKKWKMCYWLDLVSFFNSFLKSYQELVEVNYFSARPTDA 60

Query: 57  EQQFSPLHPLLDWLHYNGFQVVA-----KVAKE-FTENCGRKRVKSSMDVELAVDAFEQS 110
            +                F ++      K  K  +         +   DV +A      +
Sbjct: 61  GKHDRQDKLFQANKCNPKFNLILGKYLKKEIKCRYCGGIIHSFEEKETDVRIATKILSDA 120

Query: 111 EG 112
             
Sbjct: 121 YK 122


>gi|121606339|ref|YP_983668.1| hypothetical protein Pnap_3450 [Polaromonas naphthalenivorans CJ2]
 gi|120595308|gb|ABM38747.1| hypothetical protein Pnap_3450 [Polaromonas naphthalenivorans CJ2]
          Length = 375

 Score = 58.9 bits (141), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 37/139 (26%), Gaps = 28/139 (20%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSR-AIVIRAYYYTTVVGDPEQQFSPLHPL 66
            AL ID  N      +    ID         +    V     Y             L  L
Sbjct: 16  AALLIDADNF-----SDPQAID--AAWAELNAYAGRVSVCRAYGAGP--------RLEWL 60

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGC 124
                Y G +    +  +          K++ D  L  DA        +    I SGD  
Sbjct: 61  QSVWRYLGTRTFPNLPLQ----------KNTTDAALIADAVALHFQQGIRLFAIASGDAD 110

Query: 125 FTTLVAALQRKVKKVTIVS 143
           F  L   L+    +V   S
Sbjct: 111 FAPLAVRLREWGCEVWCFS 129


>gi|302561149|ref|ZP_07313491.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
 gi|302478767|gb|EFL41860.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
          Length = 184

 Score = 58.5 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/175 (13%), Positives = 54/175 (30%), Gaps = 26/175 (14%)

Query: 5   REKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSRAI------VIRAYYYT 50
            ++  + +D   L  ++              +D+  L++  R RA       ++R Y++ 
Sbjct: 1   MDRCIVLVDAGYLLGAAASLLAGEPSRSRITVDHAALIQGLRERAESDTRQPLLRIYWFD 60

Query: 51  TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110
                  Q                      V          +  +  +D  +  +  E +
Sbjct: 61  GAPDRVPQ---------PEHRRLRVMPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELA 111

Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162
                  +V+ +GDG     + A +     V + +   +D     S+ L  +AD 
Sbjct: 112 RNRACSDIVLVTGDGDLLPGMMAAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 166


>gi|78189973|ref|YP_380311.1| hypothetical protein Cag_2020 [Chlorobium chlorochromatii CaD3]
 gi|78172172|gb|ABB29268.1| hypothetical protein Cag_2020 [Chlorobium chlorochromatii CaD3]
          Length = 212

 Score = 58.5 bits (140), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 56/170 (32%), Gaps = 25/170 (14%)

Query: 5   REKIALFIDGANLYASSKALG--------FDIDYRKL----LKAFRSRAIVIRAYYYTTV 52
             ++   +DG NLY S KA            +D   L    L  F   A++ + +Y + +
Sbjct: 1   MNRVVFIVDGFNLYHSLKAAQAVQRPASTKWLDLCSLFSSQLYHFGKDAVLHKVFYISAL 60

Query: 53  V----GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEF------TENCGRKRVKSSMDVEL 102
                             +  L  NG   +    K         +    K  +   DV L
Sbjct: 61  AVHLEASNPNLTKRHQAYIKCLQANGVITLLNRFKRKDVFCKLCKRSFYKYEEKETDVML 120

Query: 103 AVDAFE--QSEGLEHLVIFSGDGCFTTLVAALQRKV-KKVTIVSTVLSDP 149
           A   FE   ++  + +V+ +GD      + + Q+    K+ + +      
Sbjct: 121 ATTLFEQLATDNCDTVVLVTGDTDLAPAIRSGQKLFPHKLILFAFPYGTK 170


>gi|330836836|ref|YP_004411477.1| hypothetical protein Spico_0871 [Spirochaeta coccoides DSM 17374]
 gi|329748739|gb|AEC02095.1| Domain of unknown function DUF88 [Spirochaeta coccoides DSM 17374]
          Length = 265

 Score = 58.1 bits (139), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 57/182 (31%), Gaps = 21/182 (11%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            R+  A++ID  N+ A       ++D + L      +           V        S +
Sbjct: 2   KRKNNAVYIDLENIPA-------NLDVKNLFDELTLKHNAEDDEENIFVTKMACGNSSAI 54

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ----SEGLEHLVIF 119
             L   L    F +                 K+  D+ ++++A E     +  ++  V  
Sbjct: 55  KKLERKLAEYNFIIRDTPPITSAY-------KNRADLIISLEALETIITNTPSIDRYVFI 107

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDE 179
           + D  FT ++  L++  K+V +V+                 D  + L      +      
Sbjct: 108 TSDSDFTVIMEMLRKYGKEVYLVTKESVASKPI---FNNCCDEILLLEDFLTGVQEKNTG 164

Query: 180 DK 181
            +
Sbjct: 165 GR 166


>gi|103487486|ref|YP_617047.1| hypothetical protein Sala_2003 [Sphingopyxis alaskensis RB2256]
 gi|98977563|gb|ABF53714.1| hypothetical protein Sala_2003 [Sphingopyxis alaskensis RB2256]
          Length = 213

 Score = 58.1 bits (139), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 53/154 (34%), Gaps = 21/154 (13%)

Query: 1   MFDPRE--KIALFIDGANLYASSKA---LGF-DIDYRKLLKAFRS--RAIVIRAYYYTTV 52
           M D     +   F DG NL+ S+K      + + D   L +         + +  +YT V
Sbjct: 5   MADQLPLIRAVAFFDGQNLFHSAKQAFGYSWPNFDPTLLAERVCQDHGWQLQQTRFYTGV 64

Query: 53  VGDPEQQFSPLHPLLDW--LHYNGFQVVAKVAKEF---------TENCGRKRVKSSMDVE 101
               ++ F     +     +   G  V  +  +           TE+      +  +DV 
Sbjct: 65  PDAADKPFWNHFWVAKAAQMARQGVHVFTRSLRYRNKKVRLPDGTEHSFLDGDEKGIDVR 124

Query: 102 LAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQ 133
           +A+D    +     +  ++F  D   T +   ++
Sbjct: 125 IALDVIRLALKREFDVAILFCRDQDLTEVADEIR 158


>gi|46127481|ref|XP_388294.1| hypothetical protein FG08118.1 [Gibberella zeae PH-1]
          Length = 206

 Score = 57.7 bits (138), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 57/200 (28%), Gaps = 37/200 (18%)

Query: 8   IALFIDGANLYASSKALG--------FDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
           + ++ID +N+    +A+         ++ D   L      +  +     +     +    
Sbjct: 14  VCIYIDDSNVAIRGRAMHDPQGTLTPWNYDIDVLANIIIQQFDLTAIEPFVQKSLNFYGA 73

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGL------ 113
                P LD L   G                    +   DV LA D  EQ++        
Sbjct: 74  DLHRSPQLDHLRGLGLVYG------CDCPRNGHGHEKQADVALATDMTEQAKHALDFGIA 127

Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF---------- 163
              V+ SGD  F   V  +      V + +         S +  R    F          
Sbjct: 128 RDFVLVSGDSDFIPAVRKVLGYGFNVHVWA----WRRSLSSEFYRLKQDFEDNCVPGLGQ 183

Query: 164 ---MDLAYLKNEIARDPDED 180
                L    +++ R P+ D
Sbjct: 184 MRVHFLESHLHQLTRSPESD 203


>gi|282897247|ref|ZP_06305249.1| hypothetical protein CRD_02171 [Raphidiopsis brookii D9]
 gi|281197899|gb|EFA72793.1| hypothetical protein CRD_02171 [Raphidiopsis brookii D9]
          Length = 128

 Score = 57.7 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 48/129 (37%), Gaps = 11/129 (8%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRA-YYYTTVVGDPEQQFSPLHPL 66
            A+  D  NL   +K   F  D+ K L   +    ++         +      +S     
Sbjct: 6   TAILYDIENL---TKGYSFSKDFIKELSLKQIYRQILEVDIVNKICLQRAYANWSDHR-- 60

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDG 123
           L  L     ++     + F     R   K++ D++L VD  + +     +E  VI SGDG
Sbjct: 61  LSLLRGEINELGIDPIQIF--GFARYHKKNAADIQLVVDTMDITIRFPHIEVYVIVSGDG 118

Query: 124 CFTTLVAAL 132
            F +L   L
Sbjct: 119 GFASLAKKL 127


>gi|170093988|ref|XP_001878215.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164646669|gb|EDR10914.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 565

 Score = 57.7 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 55/160 (34%), Gaps = 15/160 (9%)

Query: 1   MFDP-REKIALFIDGANLYASSKALGFDI-DYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58
           M +   E +A+F D  N  A S   G++I    + L        + +AY   + +     
Sbjct: 1   MQNNGSENVAIFWDYENCPAPSNISGYEIVKGIRSLAQLYGSVKLFKAYLEISSLESGLL 60

Query: 59  QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEH 115
               L      L  +G  ++                K   D  + VD    +        
Sbjct: 61  TPRLLTL-TSELQSSGVSLIHCP---------HNGRKDVADKMMLVDMLSHAIDNPAPTT 110

Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQ 155
           +V+ SGD  F   ++ L+ +   V +++   +  S+ S  
Sbjct: 111 IVLISGDRDFAYAISVLRLRRYHVVLITLANAHLSLTSQA 150


>gi|291450828|ref|ZP_06590218.1| conserved hypothetical protein [Streptomyces albus J1074]
 gi|291353777|gb|EFE80679.1| conserved hypothetical protein [Streptomyces albus J1074]
          Length = 403

 Score = 57.7 bits (138), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 21/149 (14%), Positives = 44/149 (29%), Gaps = 18/149 (12%)

Query: 23  ALGFDIDYRKLLKAFRSRAI------VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQ 76
                +D+  L++  R RA       ++R Y++        Q                  
Sbjct: 21  RSRISVDHATLVRQLRERAEAETAQPLLRIYWFDGAPDRVPQ---------PEHRRLRVM 71

Query: 77  VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQR 134
               V          +  +  +D  +  +  E +       +V+ +GDG     + A + 
Sbjct: 72  PRVTVRLGALTRSDGRWAQKGVDAAMHAELTELARNKACSDIVLVTGDGDLLPGMTAAKE 131

Query: 135 KVKKVTIVST-VLSDPSMASDQLRRQADY 162
               V + +          S+ L  +AD 
Sbjct: 132 HGVAVHLWAVQAAGGDYNQSEDLVAEADE 160


>gi|291443977|ref|ZP_06583367.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Streptomyces
           roseosporus NRRL 15998]
 gi|291346924|gb|EFE73828.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Streptomyces
           roseosporus NRRL 15998]
          Length = 232

 Score = 57.7 bits (138), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 23/174 (13%), Positives = 54/174 (31%), Gaps = 26/174 (14%)

Query: 6   EKIALFIDGANLYASSK--------ALGFDIDYRKLLKAFRSRAI------VIRAYYYTT 51
           ++  + +D   L  ++              +D+  L++  R RA       ++R Y++  
Sbjct: 5   DRCVVLVDAGYLLGAAASLLAGEPARSRITVDHAALIQGLRERAEADTQQPLLRIYWFDG 64

Query: 52  VVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE 111
                 Q                      V          +  +  +D  +  +  E + 
Sbjct: 65  APDRVPQ---------PEHRRLRVMPRVTVRLGALTRSDGRWAQKGVDAAMHAELTELAR 115

Query: 112 G--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS-MASDQLRRQADY 162
                 +V+ +GDG     + + +     V + +   +D     S+ L  +AD 
Sbjct: 116 NRACSDVVLVTGDGDLLPGLMSAKEHGVAVHLWAVQAADGDYNQSEDLVAEADE 169


>gi|28897852|ref|NP_797457.1| hypothetical protein VP1078 [Vibrio parahaemolyticus RIMD 2210633]
 gi|153838031|ref|ZP_01990698.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810]
 gi|28806065|dbj|BAC59341.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633]
 gi|149748565|gb|EDM59424.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810]
          Length = 249

 Score = 57.0 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 63/177 (35%), Gaps = 25/177 (14%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M      IA++ID  N+ AS      D    +++ +F S           T+      Q 
Sbjct: 10  MKKKNFNIAVYIDMENIAAS------DFQLEEVMNSFLSADD--EYNCIFTIKSAYGNQA 61

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE----QSEGLEHL 116
           +    L   +  + F ++              + K+  D+ L++DAFE     +  ++  
Sbjct: 62  TAKKSLKTQILEHNFNIIDTPKI--------GKEKNRADLLLSLDAFESLHLDNPRVDRY 113

Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSD-PSMASDQLRRQADYFMDLAYLKNE 172
              + D  FT +   L++  ++V +V        ++ +       D  + +     +
Sbjct: 114 CFMTTDSDFTVIADKLRKFGREVWLVCKKSDKDRAIIAKSF----DNLLFVEDFLPK 166


>gi|294084800|ref|YP_003551560.1| hypothetical protein SAR116_1233 [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292664375|gb|ADE39476.1| hypothetical protein SAR116_1233 [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 267

 Score = 57.0 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 32/92 (34%)

Query: 55  DPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLE 114
           D   +       L     N  +       ++     +   + ++DV L++    ++   +
Sbjct: 135 DSTHKSIRHKQDLIAKDNNAIEFCRSGEIQYNLLKRQYGKEKTVDVNLSLGMVLKAPIYD 194

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVL 146
             +I SGD  +   V  ++   K V  VS   
Sbjct: 195 TAIIVSGDQDYVPAVQQVKNLGKHVINVSFQK 226


>gi|298245748|ref|ZP_06969554.1| protein of unknown function DUF88 [Ktedonobacter racemifer DSM
           44963]
 gi|297553229|gb|EFH87094.1| protein of unknown function DUF88 [Ktedonobacter racemifer DSM
           44963]
          Length = 451

 Score = 57.0 bits (136), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 8/79 (10%)

Query: 92  KRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQ-RKVKKVTIVSTVLS 147
             V+S++D+ + +D  E       +   V+ +GD  FT + A L+ R  K V +V     
Sbjct: 232 TVVQSTVDLNMLMDIIETVFDRPTISTFVLMTGDKDFTRISARLKLRLNKNVIVVGI--- 288

Query: 148 DPSMASDQLRRQADYFMDL 166
            P   S  L   A+ F+ L
Sbjct: 289 -PGTVSRDLISSANQFVPL 306



 Score = 48.5 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 29/80 (36%), Gaps = 8/80 (10%)

Query: 8  IALFIDGANLYASSKAL-GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
          IALFID  N+  S   +   + D ++L+   R    V+ A  Y      PE       P 
Sbjct: 5  IALFIDFENIRYSMLNIQRREPDPQELIAVARRYGTVMVARAYADWSRQPE-------PF 57

Query: 67 LDWLHYNGFQVVAKVAKEFT 86
             L       V   AK+  
Sbjct: 58 KGSLTAAMIDRVDCPAKQRD 77


>gi|296446572|ref|ZP_06888514.1| protein of unknown function DUF88 [Methylosinus trichosporium OB3b]
 gi|296255926|gb|EFH03011.1| protein of unknown function DUF88 [Methylosinus trichosporium OB3b]
          Length = 272

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/168 (19%), Positives = 57/168 (33%), Gaps = 26/168 (15%)

Query: 11  FIDGANLYASSKALG--------FDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
           FIDG  L      +G          +D+R+L  + R        +YY  +      +   
Sbjct: 13  FIDGECLNRIVSKIGDTYFSGARPPLDWRRLGDSCRK------IFYYDAIPVPKAGEDEA 66

Query: 63  LHPLLDWLHYNGFQVVAKVAKEF------TENCGRKRVKSSMDVELAVDAFEQSEG--LE 114
           +         +    + +  +             R   +  +DV+LAVDA   +      
Sbjct: 67  IFNARAVPKNSELSEIDRQPRYHVRTGEARHRRKRGNEQKMVDVQLAVDALSMASRGLFT 126

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162
              + +GD  F  LV+AL      VT++          +D L+  AD 
Sbjct: 127 SCTLITGDLDFKPLVSALVDMGVDVTLL----FPDDETNDDLKAAADQ 170


>gi|262197445|ref|YP_003268654.1| hypothetical protein Hoch_4264 [Haliangium ochraceum DSM 14365]
 gi|262080792|gb|ACY16761.1| protein of unknown function DUF88 [Haliangium ochraceum DSM 14365]
          Length = 261

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/148 (13%), Positives = 44/148 (29%), Gaps = 10/148 (6%)

Query: 32  KLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGR 91
            L +      +     +Y       ++                F  + +      +   R
Sbjct: 110 SLCREAWKHHLSECRRWYDAKRHTLDKMR---RFYHAVRSSTDFIDIDERGHWKVDILRR 166

Query: 92  KRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDP-- 149
              +  +D  LAVD     +  +  V+ SGD      +   + + K+V  V         
Sbjct: 167 SVQEKGIDTSLAVDMVAMLDNYDVAVVLSGDADMIPSIEIAKNRCKQVAAVQFQQGQRTE 226

Query: 150 ---SMASDQLRRQADYFMDL--AYLKNE 172
                 + +L+  AD+ + +    L  +
Sbjct: 227 RRGRGFASRLKASADFVVTIYEDDLLAQ 254



 Score = 34.6 bits (78), Expect = 5.9,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 34/103 (33%), Gaps = 18/103 (17%)

Query: 5   REKIALFIDGANLYASSKALGFDI-DYRKLLKAFRSR----------------AIVIRAY 47
             + +LF+DG+NL+   +  G  + DY+   +    +                A ++R Y
Sbjct: 1   MHRFSLFVDGSNLFGVLRGQGIQVDDYQGFYRFLFEQTVSSWHSSAPATEPLPACLVRVY 60

Query: 48  YY-TTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENC 89
           +Y    + D +   S     L        +V      E     
Sbjct: 61  WYVVGQMDDWDLSDSKTQRHLQEQFERDEEVQRLALAEIGHPP 103


>gi|260361784|ref|ZP_05774809.1| conserved hypothetical protein [Vibrio parahaemolyticus K5030]
 gi|260877013|ref|ZP_05889368.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034]
 gi|260899084|ref|ZP_05907525.1| conserved hypothetical protein [Vibrio parahaemolyticus Peru-466]
 gi|308089166|gb|EFO38861.1| conserved hypothetical protein [Vibrio parahaemolyticus Peru-466]
 gi|308093770|gb|EFO43465.1| conserved hypothetical protein [Vibrio parahaemolyticus AN-5034]
 gi|308113222|gb|EFO50762.1| conserved hypothetical protein [Vibrio parahaemolyticus K5030]
          Length = 240

 Score = 56.6 bits (135), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 20/146 (13%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M      IA++ID  N+ AS      D    +++ +F S           T+      Q 
Sbjct: 1   MKKKNFNIAVYIDMENIAAS------DFQLEEVMNSFLSADD--EYNCIFTIKSAYGNQA 52

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE----QSEGLEHL 116
           +    L   +  + F ++              + K+  D+ L++DAFE     +  ++  
Sbjct: 53  TAKKSLKTQILEHNFNIIDTPKI--------GKEKNRADLLLSLDAFESLHLDNPRVDRY 104

Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIV 142
              + D  FT +   L++  ++V +V
Sbjct: 105 CFMTTDSDFTVIADKLRKFGREVWLV 130


>gi|325972567|ref|YP_004248758.1| hypothetical protein SpiBuddy_2755 [Spirochaeta sp. Buddy]
 gi|324027805|gb|ADY14564.1| Domain of unknown function DUF88 [Spirochaeta sp. Buddy]
          Length = 266

 Score = 56.6 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 66/186 (35%), Gaps = 26/186 (13%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            R+  AL+ID  N+ +        +D + L +    +           V+       + +
Sbjct: 2   HRKNNALYIDLENIPSG-------LDLKMLFEELTLKHNESPEEENIFVIKMACGNSASI 54

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ----SEGLEHLVIF 119
             L   L    F +                 K+  D+ ++++A E     +  ++  V  
Sbjct: 55  KKLEKQLAEYNFTIRDTP-------SITTNYKNRADLIISLEALETIIINTPVIDRYVFI 107

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQ--LRRQADYFMDLAYLKNE-IARD 176
           + D  FT ++ AL++  K+V +V+         SD+       D  + +     +    +
Sbjct: 108 TSDSDFTVIMEALRKYGKEVYLVT-----KESVSDKPIFNNCCDEILIIESFMPKPKTEE 162

Query: 177 PDEDKK 182
           P E +K
Sbjct: 163 PKEAEK 168


>gi|150378220|ref|YP_001314815.1| hypothetical protein Smed_6284 [Sinorhizobium medicae WSM419]
 gi|150032767|gb|ABR64882.1| conserved hypothetical protein [Sinorhizobium medicae WSM419]
          Length = 48

 Score = 56.6 bits (135), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/47 (70%), Positives = 38/47 (80%)

Query: 1  MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAY 47
          MFD REKIAL IDGANL+A+SKALGF+ID+ KLL AFR RA + R  
Sbjct: 1  MFDQREKIALLIDGANLHAASKALGFEIDFCKLLSAFRRRASLPRCN 47


>gi|307305137|ref|ZP_07584886.1| protein of unknown function DUF88 [Sinorhizobium meliloti BL225C]
 gi|306902477|gb|EFN33072.1| protein of unknown function DUF88 [Sinorhizobium meliloti BL225C]
          Length = 92

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/45 (75%), Positives = 39/45 (86%)

Query: 1  MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIR 45
          MFD REKIAL +DG NLYA+SKALGFDIDY KLL+AFR RA ++R
Sbjct: 1  MFDHREKIALLMDGPNLYAASKALGFDIDYCKLLEAFRKRAYLLR 45


>gi|150249496|gb|ABR67774.1| unknown [Saccharothrix mutabilis subsp. capreolus]
          Length = 278

 Score = 56.2 bits (134), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 49/136 (36%), Gaps = 7/136 (5%)

Query: 6   EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTT----VVGDPEQQFS 61
           E+I +F DG             +  R    +       +R Y +T     +      +  
Sbjct: 5   ERIGVFYDGTWFAY-LSDYFASVHPRAARVSLDGFHDALRWYVHTVTHQPLDECVVSEAH 63

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGL--EHLVIF 119
            +   +D        V+A       +       +  +DV LA++A+E++  +    +V+ 
Sbjct: 64  YVRGRIDTPAVAFDAVLAAAGVVRHDLPLHAGKEKGVDVHLALEAWERATSVPLRWVVLV 123

Query: 120 SGDGCFTTLVAALQRK 135
           +GD  F  L   L+ +
Sbjct: 124 TGDADFAPLATRLKTR 139


>gi|153832437|ref|ZP_01985104.1| conserved hypothetical protein [Vibrio harveyi HY01]
 gi|148871232|gb|EDL70104.1| conserved hypothetical protein [Vibrio harveyi HY01]
          Length = 241

 Score = 55.8 bits (133), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 57/146 (39%), Gaps = 20/146 (13%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M      IA++ID  N+ AS      D    +++ +F S           T+      Q 
Sbjct: 2   MKKKNFNIAVYIDMENIAAS------DFQLEEVMNSFLSADD--EYNCIFTIKSAYGNQA 53

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE----QSEGLEHL 116
           +    L   +  + F ++        +     + K+  D+ L++DAFE     +  ++  
Sbjct: 54  TAKKSLKTQILEHNFNII--------DTQKIGKEKNRADLLLSLDAFESLHLDNPRVDRY 105

Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIV 142
              + D  FT +   L++  ++V +V
Sbjct: 106 CFMTTDSDFTVIADKLRKFGREVWLV 131


>gi|302865596|ref|YP_003834233.1| hypothetical protein Micau_1095 [Micromonospora aurantiaca ATCC
           27029]
 gi|315502144|ref|YP_004081031.1| hypothetical protein ML5_1342 [Micromonospora sp. L5]
 gi|302568455|gb|ADL44657.1| hypothetical protein Micau_1095 [Micromonospora aurantiaca ATCC
           27029]
 gi|315408763|gb|ADU06880.1| hypothetical protein ML5_1342 [Micromonospora sp. L5]
          Length = 485

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 43/132 (32%), Gaps = 5/132 (3%)

Query: 28  IDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD-WLHYNGFQVVAKVAKEFT 86
           +D+  L  A   R  ++       +  D   +                  +   + +   
Sbjct: 11  VDWDNLAGAVIGRGHLVERGIVDALWSDATTRCGGHLQYKHMAAVRFDGSITTAMTEHLI 70

Query: 87  ENCGRKRVKSSMDVELAVDAFEQSEG-LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTV 145
           +      +K   D+ L V A +         V+ +GD  F  L+  L R   +VT+V   
Sbjct: 71  DAEVVVSLKEQADIHLTVLAMDYLHQGCGQFVLVTGDQDFIPLIRRLLRDGCRVTVV--- 127

Query: 146 LSDPSMASDQLR 157
             DP   S Q R
Sbjct: 128 YGDPDRLSPQFR 139


>gi|119356715|ref|YP_911359.1| hypothetical protein Cpha266_0887 [Chlorobium phaeobacteroides DSM
           266]
 gi|119354064|gb|ABL64935.1| conserved hypothetical protein [Chlorobium phaeobacteroides DSM
           266]
          Length = 136

 Score = 55.4 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 45/136 (33%), Gaps = 23/136 (16%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLL-------KAFRSRAIVIRAYYYTTVVGDPE 57
           +E++ +++DG NLY      G   DY K L          +    ++   Y+T+ V D  
Sbjct: 11  KERVHVYVDGFNLYFGMLEAG--FDYCKWLNLKLLATNLLKPNQELVCVKYFTSRVSDNP 68

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRK------RVKSSMDVELAVDAFEQSE 111
            +       ++ L      ++    +     C R         +   DV +A      S 
Sbjct: 69  DKQKRQTTYIEALESERVHILYGHYQRNPIECKRCGNIWASYNEKMTDVNIA---MSLSG 125

Query: 112 GLEHLVIFSGDGCFTT 127
            + H     G   F  
Sbjct: 126 RVRH-----GHADFRR 136


>gi|149912718|ref|ZP_01901252.1| hypothetical protein RAZWK3B_01980 [Roseobacter sp. AzwK-3b]
 gi|149813124|gb|EDM72950.1| hypothetical protein RAZWK3B_01980 [Roseobacter sp. AzwK-3b]
          Length = 204

 Score = 55.4 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 59/205 (28%), Gaps = 51/205 (24%)

Query: 7   KIALFIDGANLYASSK-ALGFDIDYRKLL--------KAFRSRAIVIRAYYYTTVVGDPE 57
           + A+ IDG       K  L    D   +L            S   ++R YYY       +
Sbjct: 4   RYAILIDGGFFTRKLKQRLNKTPDVDDVLHAIDELKENELLSGFELLRTYYYDAYAASGK 63

Query: 58  QQ---------------FSPLHPLLDWLH-----------------YNGFQVVA------ 79
            +               F+     L  L                     ++V+       
Sbjct: 64  VKHPVTKQTVNLAETDVFTRNKAFLQKLELQPNISLRAGELSPRGYKLNYRVMHQDDLAS 123

Query: 80  KVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKV 139
           +  +E       ++    + + L +D     + +  +V+ +GD  F       +R+  +V
Sbjct: 124 RPLEEKDFMLDIEQKGVDLRIGLDIDRLSLRQMVRTIVVVTGDSDFIPAFKFARREGVRV 183

Query: 140 TIVSTVLSDPSMASDQLRRQADYFM 164
            +             +L+   D F+
Sbjct: 184 ILAHMDHGVK----RELKAHTDGFI 204


>gi|307322651|ref|ZP_07601984.1| protein of unknown function DUF88 [Sinorhizobium meliloti AK83]
 gi|306891697|gb|EFN22550.1| protein of unknown function DUF88 [Sinorhizobium meliloti AK83]
          Length = 193

 Score = 55.4 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 44/172 (25%), Positives = 76/172 (44%), Gaps = 9/172 (5%)

Query: 5   REKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            ++    IDG++ Y   ++ L    D   L     + A +  A YY  V  + E+     
Sbjct: 17  TQQTIFLIDGSH-YDRLRSVLESPFDLSALAHIASNGAPLDHAIYYRDVRDESEEARQRS 75

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
             L  WL +NGF V  +       +   +    +  VELAVDA   +   + ++I + D 
Sbjct: 76  --LFGWLKHNGFMVKGR----RHSSGEPRERYGTNLVELAVDALLLAHSGDRVLILAADA 129

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMA-SDQLRRQADYFMDLAYLKNEIA 174
               L+AAL+     VT++ST  +  ++A +  L   A+ F++L  +   IA
Sbjct: 130 KLAPLLAALRDDDIDVTLISTEDAPNTIAPARHLIENANRFLELKSVLEWIA 181


>gi|319948971|ref|ZP_08023074.1| hypothetical protein ES5_06227 [Dietzia cinnamea P4]
 gi|319437361|gb|EFV92378.1| hypothetical protein ES5_06227 [Dietzia cinnamea P4]
          Length = 361

 Score = 55.4 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 27/82 (32%), Gaps = 5/82 (6%)

Query: 88  NCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTV 145
             G +R + ++D  L  D  + +       +V+ +GD      V        ++ +V   
Sbjct: 8   EWGERRTQKAVDTLLVADMIQAAYKGHCSDMVLVTGDADMIPGVRVAVDAGVRMHLVGFG 67

Query: 146 LSDPSMASDQLRRQADYFMDLA 167
                  S  LR   D    L 
Sbjct: 68  ---WDSISSALRHACDTTTVLD 86


>gi|186683222|ref|YP_001866418.1| hypothetical protein Npun_F2944 [Nostoc punctiforme PCC 73102]
 gi|186465674|gb|ACC81475.1| conserved hypothetical protein [Nostoc punctiforme PCC 73102]
          Length = 186

 Score = 55.4 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 62/173 (35%), Gaps = 29/173 (16%)

Query: 12  IDG-ANLYASSK----ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           IDG  N+Y +         + +DY +L +                          P    
Sbjct: 26  IDGVGNIYEAINLKIFDNDWYMDYGRLHEFLCG------TEKSEIGGTRLWGSPPPKDTF 79

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGL-----EHLVIFSG 121
            D++   GF V     + +  + G+   +  +D  +A    + S  +     + +VI +G
Sbjct: 80  WDYVKSKGFNV-----QTYERSKGK---EKKVDTAIAYQIGKDSGKIIDKENDIIVIAAG 131

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
           D  +   +  L     KV +     +    A+ +++  A  F++L   ++ ++
Sbjct: 132 DKDYMPCIDDLTSDGFKVHV-----AFWGHAAREVQEAATKFINLDPHQDYLS 179


>gi|319943364|ref|ZP_08017646.1| hypothetical protein HMPREF0551_0492 [Lautropia mirabilis ATCC
           51599]
 gi|319743179|gb|EFV95584.1| hypothetical protein HMPREF0551_0492 [Lautropia mirabilis ATCC
           51599]
          Length = 323

 Score = 55.4 bits (132), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/183 (13%), Positives = 55/183 (30%), Gaps = 37/183 (20%)

Query: 5   REKIALFIDGANLYA----------SSKALGFDI-DYRKLLKAFRSR---------AIVI 44
            ++  + +D   L            S+K    ++ +   L+     +           ++
Sbjct: 6   MDRFVVMVDAGYLLHQSAEIVSERASTKRHHLEVMNPAALINLLLEKTRTALGLTTRELL 65

Query: 45  RAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAV 104
           R Y+Y  V+             L                  +        +  +D  +  
Sbjct: 66  RVYWYDGVMASGLSPQQRAIAELP------------DVHFRSGIVNAAGQQRGVDSLIVT 113

Query: 105 DAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVS---TVLSDPSMASDQLRRQ 159
           D  E +    +    + +GDG F   +   Q+K  ++ ++    T L      S ++  +
Sbjct: 114 DLIELASNGAISDAALVTGDGDFAIGIEMAQKKGVRIAVIGVEDTELGVSHRQSFEITSR 173

Query: 160 ADY 162
           AD 
Sbjct: 174 ADR 176


>gi|68535260|ref|YP_249965.1| hypothetical protein jk0195 [Corynebacterium jeikeium K411]
 gi|68262859|emb|CAI36347.1| hypothetical protein jk0195 [Corynebacterium jeikeium K411]
          Length = 245

 Score = 55.0 bits (131), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 63/201 (31%), Gaps = 36/201 (17%)

Query: 3   DPREKIALFID---------GANLY---ASSKALGFDIDYRKLLKAFRSRAIVIRAYYYT 50
           +P E+    +D         GANLY            + +  L +   +        + +
Sbjct: 30  EPSERANELVDYCRRHIRTAGANLYRIFYYDCQPSERVLFHPLAQKQVNLGKSEEFRWNS 89

Query: 51  TVVGDPEQQFSPLHPLLDWLH-YNGFQVVAKVAKE-----------FTENCGRKRVKSSM 98
             + +  ++        + L   NG+ +     K+             E+      +  +
Sbjct: 90  EFLKEIVKKRKVALRRGEELETQNGYMLKFAPLKKLCRGAISVDDLRLEDFYLDITQKGV 149

Query: 99  DVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL 156
           D+ + +D    +E   +  +++ SGD  F       +R      I        +  SD L
Sbjct: 150 DMRIGLDIATMAERGIVTQIIMISGDSDFVPAAKHARRAGIDFII----DPLWARISDSL 205

Query: 157 RRQADYFMDLAYLKNEIARDP 177
           +   D       ++  + R P
Sbjct: 206 KEHVD------GVRECVRRPP 220


>gi|94312282|ref|YP_585492.1| hypothetical protein Rmet_3351 [Cupriavidus metallidurans CH34]
 gi|93356134|gb|ABF10223.1| conserved hypothetical protein [Cupriavidus metallidurans CH34]
          Length = 253

 Score = 55.0 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 59/180 (32%), Gaps = 23/180 (12%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M      IA+++D  N+ AS      D+    LL       I +    Y +       Q 
Sbjct: 14  MKKQVLNIAVYVDMENV-ASIDFALEDLMSALLLAEDDHNCIFVIKAAYGS-------QG 65

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS----EGLEHL 116
           +    L + L  + F ++                K+  D+ +++DAFE        ++  
Sbjct: 66  NAKKALKEQLIDHNFTLIDTPKI--------GVEKNRADLCISLDAFETLYLGNPRIDRY 117

Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
              + D  FT +   L++  K+V +              L +  D  + L        R 
Sbjct: 118 CFLTSDSDFTVIGDRLRKYGKEVWLACRRKDKDRAI---LAKAFDTMLFLEDFAQAKIRT 174


>gi|320103348|ref|YP_004178939.1| hypothetical protein Isop_1808 [Isosphaera pallida ATCC 43644]
 gi|319750630|gb|ADV62390.1| protein of unknown function DUF88 [Isosphaera pallida ATCC 43644]
          Length = 276

 Score = 55.0 bits (131), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 15/107 (14%), Positives = 32/107 (29%), Gaps = 5/107 (4%)

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119
                          F  + +      +       +  +D  +AVD     +  +  ++ 
Sbjct: 139 DRKKRFYYGVQAATDFVEIRQEGHWKIDLLHHTINEKGLDTSMAVDMIALRDTYDVALLI 198

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDP-----SMASDQLRRQAD 161
           +GD      V  ++   K V ++              AS +L+  AD
Sbjct: 199 TGDTDGIPGVHYVKNHAKHVGVIEFRRGSRDDFGGKTASSRLKIAAD 245


>gi|121609559|ref|YP_997366.1| hypothetical protein Veis_2603 [Verminephrobacter eiseniae EF01-2]
 gi|121554199|gb|ABM58348.1| hypothetical protein Veis_2603 [Verminephrobacter eiseniae EF01-2]
          Length = 277

 Score = 54.6 bits (130), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/183 (12%), Positives = 57/183 (31%), Gaps = 37/183 (20%)

Query: 5   REKIALFIDGANLY-----------ASSKALGFDIDYRKLLKAFRS---------RAIVI 44
             +  + +D   L+           ++S+A    +D   L++A            R  ++
Sbjct: 1   MNRFVVMVDADYLFRQAIDIVSNRASTSRADLDIVDPAGLIEALLDKSRSTLDLTRKELL 60

Query: 45  RAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAV 104
           R Y+Y  V+ +           +D              +        +  +  +   +A 
Sbjct: 61  RVYWYDGVMANGFTPQQRSLANID------------DVQFRAGTINGRDQQRDIASLIAT 108

Query: 105 DAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVL---SDPSMASDQLRRQ 159
           D  E +    +   V+ +GD      +   ++   ++ ++             S ++  +
Sbjct: 109 DLLELAGHHAICDAVLVTGDSDLAVGIDMAKKHGVRIAVLGVEDPATGVARHRSAEIACR 168

Query: 160 ADY 162
           AD 
Sbjct: 169 ADR 171


>gi|168698676|ref|ZP_02730953.1| hypothetical cytosolic protein [Gemmata obscuriglobus UQM 2246]
          Length = 207

 Score = 54.3 bits (129), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 46/128 (35%), Gaps = 9/128 (7%)

Query: 45  RAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEF----TENCGRKRVKSSMDV 100
           R  Y+T   G+          L             K  ++       + G        D+
Sbjct: 70  RKVYFTAFTGNDNVLHDAHVYLRSLHFEPYIIKEDKGLRDRRRSKANDAGVIEKPKGADI 129

Query: 101 ELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRR 158
            LAV   E +  +  + + +F+ D  +  ++ A++R  K V +        ++ + +L  
Sbjct: 130 ALAVRMIEDAVLDNYQIVGLFTSDADYLPVIKAVRRMGKYVVVYGFK---ENLGNPELEY 186

Query: 159 QADYFMDL 166
             D F+DL
Sbjct: 187 VPDEFVDL 194


>gi|300871590|ref|YP_003786463.1| hypothetical protein BP951000_1984 [Brachyspira pilosicoli 95/1000]
 gi|300689291|gb|ADK31962.1| conserved hypothetical protein [Brachyspira pilosicoli 95/1000]
          Length = 260

 Score = 54.3 bits (129), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 71/172 (41%), Gaps = 19/172 (11%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
            ++I ++ID  N+      L F+++++ +L+            +Y + + D +  +S   
Sbjct: 1   MKRIGIYIDLENIAH----LKFNVNFKLILEDI--------IKFYRSNLKDKDIYYSIKK 48

Query: 65  PLLDWLHYNGFQVVAKVAKE-FTENCGRKRVKSSMDVELAVDAFE---QSEGLEHLVIFS 120
              D      ++   +        +    + K+  D+  ++DAFE    ++ ++ +V  S
Sbjct: 49  AYGDNKSIKLYEKELRDLHIDIIHSVHINKAKNMSDMISSIDAFEDFVFNKNIDIIVFVS 108

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
            D  +T ++  L+R      IV+T+ +      D  +  ++    +   K +
Sbjct: 109 RDVDYTIVMERLKRHGAIAAIVTTITNANR---DIFQNVSNKIFKIEKYKAK 157


>gi|219128570|ref|XP_002184482.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217403932|gb|EEC43881.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 401

 Score = 54.3 bits (129), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 24/180 (13%), Positives = 55/180 (30%), Gaps = 29/180 (16%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           +A+F D  N+   S         + ++ +   +  ++    Y       +          
Sbjct: 11  VAIFWDYENVPVPSWCKVASEASKAIVNSVSEQGRIVDRRLYFDFSNQEQGNRWSG---- 66

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS----------EGLEHLV 117
             L  +GF +V    +           K ++D ++  D                    +V
Sbjct: 67  --LDSSGFDLVNTPQR---------NQKETLDKKMIADVLLFCWDSATRNQGTNKGSCVV 115

Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
           + + DG +   +  L+ +     ++          +D L   AD  + L +   +  R P
Sbjct: 116 LVTSDGDYAYTLNKLRDRGVSSVVIYGH----GNVADILISSADVALSLKHDVLKHLRPP 171


>gi|290983351|ref|XP_002674392.1| predicted protein [Naegleria gruberi]
 gi|284087982|gb|EFC41648.1| predicted protein [Naegleria gruberi]
          Length = 650

 Score = 54.3 bits (129), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 55/166 (33%), Gaps = 27/166 (16%)

Query: 6   EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
           +K  L+ID  N   S        +Y ++L   +S+  +           +  ++      
Sbjct: 241 KKAILYIDLDNFPIS-----RPSEYLEMLAKIKSKYSIDVTAKKIFGDLNQFEKLPVDFQ 295

Query: 66  LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG---LEHLVIFSGD 122
                     Q++                K++ D+ L ++  +  E     +  +I S D
Sbjct: 296 F-------SHQLIICPKV--------SSRKNTTDIALTIEVIKDLERKKPFDVFIIASSD 340

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
             F  +V A++ + K+  I+    + P      L    +  +D   
Sbjct: 341 SDFVPVVKAIRDEGKECWIL-PSHNYPHQT---LMSICNGILDFNS 382


>gi|171057047|ref|YP_001789396.1| hypothetical protein Lcho_0356 [Leptothrix cholodnii SP-6]
 gi|170774492|gb|ACB32631.1| hypothetical protein Lcho_0356 [Leptothrix cholodnii SP-6]
          Length = 160

 Score = 53.9 bits (128), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 20/123 (16%), Positives = 36/123 (29%), Gaps = 25/123 (20%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           +A+ +D  N                 L+       V+    Y           S    L 
Sbjct: 4   VAVLVDCDNTAPDVLEHA--------LRVVAQFGQVVLRRGY-----------SSHTTLA 44

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCF 125
           +       ++      +F    G    K++ D+ LA+DA E       +   + + D  F
Sbjct: 45  NKWQEALVRLAFTPCLQFQYAAG----KNTSDIALALDALEAMFDRRSDTFCLVTSDSDF 100

Query: 126 TTL 128
             L
Sbjct: 101 AYL 103


>gi|299753919|ref|XP_002911926.1| hypothetical protein CC1G_13966 [Coprinopsis cinerea okayama7#130]
 gi|298410524|gb|EFI28432.1| hypothetical protein CC1G_13966 [Coprinopsis cinerea okayama7#130]
          Length = 938

 Score = 53.9 bits (128), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 58/176 (32%), Gaps = 27/176 (15%)

Query: 14  GANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYN 73
           G N  A +   G+D+    + +  +    V     Y  V        S    L   L  +
Sbjct: 465 GENCPAPANYTGYDL-VDAIRRMAQQFGSVKLFKAYLEVSEQVLNARS--LTLRSELQVS 521

Query: 74  GFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVA 130
           G  +                 K + D  + VD    +         ++ SGD  F   ++
Sbjct: 522 GVSLTDCP---------HNGRKDAADKMMLVDMLAHAIDHPAPRTFILISGDRDFAYALS 572

Query: 131 ALQRKVKKVTIVSTVLSDPSMASDQLRRQA----DYFMDLAYLKNEIARDPDEDKK 182
            L+ +  KV +V+        A   L+ QA    D+F D+  +   I   P   KK
Sbjct: 573 TLRLRRYKVVLVTL-----PNAHASLKAQATTCLDWFTDVVDI---ITPPPSSPKK 620


>gi|311895493|dbj|BAJ27901.1| hypothetical protein KSE_20780 [Kitasatospora setae KM-6054]
          Length = 395

 Score = 53.9 bits (128), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 61/194 (31%), Gaps = 30/194 (15%)

Query: 5   REKIALFIDGANLYASS--------KALGFDIDYRKLLKAFRSRAI------VIRAYYYT 50
            ++  + +D   L  ++              +D+  L+ A R RA       ++R Y++ 
Sbjct: 1   MDRCVVLVDAGYLLGAAASLLAGEPGRSRIAVDHPVLIAALRERAQAETGLPLLRIYWFD 60

Query: 51  TVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110
             V                           V          + V+  +D  +  +  E +
Sbjct: 61  AAVDRRPA---------PEHRRLRVLPRVTVRLGALTRAEGRWVQKGVDAAMHAELSELA 111

Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVS-TVLSDPSMASDQLRRQADYFMDLA 167
                  +V+ +GDG     VA+ +     V + +          S++L  +AD    L 
Sbjct: 112 RNHACADVVLVTGDGDLLPGVASAKEHGVAVHLWALEAADGDFNQSEELVGEADERRVLD 171

Query: 168 YLKNEIAR--DPDE 179
             +  I R   P E
Sbjct: 172 --RAWIQRWARPRE 183


>gi|256378342|ref|YP_003102002.1| hypothetical protein Amir_4302 [Actinosynnema mirum DSM 43827]
 gi|255922645|gb|ACU38156.1| protein of unknown function DUF88 [Actinosynnema mirum DSM 43827]
          Length = 281

 Score = 53.9 bits (128), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/170 (16%), Positives = 58/170 (34%), Gaps = 15/170 (8%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTT---VVGDPEQQFSPL 63
           +I +F DG                R+   +       +R + +      + D   + +  
Sbjct: 6   RIGVFYDGTWFAY-LSDFYATTHPRRARVSLDGFHDALRWHVHLAEGVPLDDCVIREAHY 64

Query: 64  HPLLDWLHYNGF-QVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFS 120
                     GF + +A       +       +  +DV  A++ ++++    L  +V+ +
Sbjct: 65  VRGRIETPATGFDEALALAGITRHDLPLHGGKEKGVDVHFALETWDRAVTAGLRWVVLVT 124

Query: 121 GDGCFTTLVAALQRKVKKVTI-VSTVLSDP-------SMASDQLRRQADY 162
           GD  FT L A L ++  +V + V+     P          +  LR  A  
Sbjct: 125 GDADFTPLAARLVKRGVRVLVPVADPRRAPQKWPENGPRTAAPLRANATD 174


>gi|188580701|ref|YP_001924146.1| hypothetical protein Mpop_1444 [Methylobacterium populi BJ001]
 gi|179344199|gb|ACB79611.1| conserved hypothetical protein [Methylobacterium populi BJ001]
          Length = 221

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 56/193 (29%), Gaps = 40/193 (20%)

Query: 7   KIALFIDGANLYASSKALGFDIDY--RKLLKA--FRSRAIVIRAYYYTTVVGDP--EQQF 60
           +  ++IDG NLY        D+ +   KLL     R    VI+  YYT  V         
Sbjct: 2   RTIVYIDGFNLYFRMLQKRPDLKWVNPKLLSEQALRPENQVIQVRYYTARVSARVDPTAP 61

Query: 61  SPLHPLLDWLHYNGFQVVAK--------------VAKEFTE------------NCGRKRV 94
           S      + L      ++ +                +   +                K  
Sbjct: 62  SRQQVYFNALDTVPEVLIHQGTFLATKKFAGLVHPPQFRPQLAAQLPQPWPAVVKVHKTE 121

Query: 95  KSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFT-TLVAALQRKVKKVTIVSTVLSDPSM 151
           +   DV LA      +  +  +   + S D      +  A Q   K V ++S V      
Sbjct: 122 EKGSDVNLASHLLLDAFRDNFDVAAVLSADSDLIEPIRIATQELGKVVGLLSPVAVPNPD 181

Query: 152 ASDQLRRQADYFM 164
            +      A  F+
Sbjct: 182 LA-----AASSFV 189


>gi|299753946|ref|XP_001833647.2| EDA32 [Coprinopsis cinerea okayama7#130]
 gi|298410535|gb|EAU88192.2| EDA32 [Coprinopsis cinerea okayama7#130]
          Length = 491

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 48/155 (30%), Gaps = 17/155 (10%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
              K+A+F D  N        G     + +  A +    +     Y  +        +  
Sbjct: 2   NDRKVAIFWDYENCPVLGGCSGHQA-VKSIRGAIQPFGSIKLFKAYFAISESH----TKS 56

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFS 120
             L   L  +G  +                 K   D  + VD    +        +V+ S
Sbjct: 57  VTLRSELQASGVSLTDTP---------HNGQKDVADKMIIVDMLLYAMDNPAPATVVLIS 107

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQ 155
           GD  +   ++ L+ +   V +++   + PS+ S  
Sbjct: 108 GDKDYAYAISVLRLRQYDVVVLTPPNASPSLTSHA 142


>gi|190576877|ref|YP_001966209.1| hypothetical protein pK245.entp41 [Klebsiella pneumoniae]
 gi|110264461|gb|ABG56824.1| hypothetical protein [Klebsiella pneumoniae]
          Length = 228

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 66/219 (30%), Gaps = 44/219 (20%)

Query: 7   KIALFIDGANLYASSKA--LGFDIDYRKLLKAFRSRAIV----IRAYYYTT-----VVGD 55
           + A FIDG NL+    A      +D   LL              +  Y+T+     +   
Sbjct: 2   RTAFFIDGYNLFYGLLAGTPFKWLDLPALLTYITKIQNPASETAQVNYFTSPVLPPLATR 61

Query: 56  PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRK----------------RVKSSMD 99
            ++        +  L   G  V     +    +  R                   +   D
Sbjct: 62  GKESAEAQDVYIRALKAKGVTVHLGRHRLNRGSAPRYLDGIPASRSDKVDVWDLEEKETD 121

Query: 100 VELAVDAFEQSE---------GLEHLVIFSGDGCFTTLVAALQRKVKKVTI---VSTVLS 147
           V +A+  +              +  +V+ S D   T  + A++    ++T+   +     
Sbjct: 122 VNIAISMYRLLSKQQNLEADARIAQIVLVSADTDMTPALKAIKEDFPEITVGIILPHREG 181

Query: 148 DPSMASDQLRRQADYF---MDLAYLKNEI--ARDPDEDK 181
                   L+  +D+    + +  L++     R P + K
Sbjct: 182 IERGVPGSLKNHSDWIRRQVKIDELQSHQFPERVPTKKK 220


>gi|257075430|ref|ZP_05569791.1| hypothetical protein Faci_00130 [Ferroplasma acidarmanus fer1]
          Length = 193

 Score = 53.1 bits (126), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 52/154 (33%), Gaps = 18/154 (11%)

Query: 3   DPREKIALFIDGANLYASSKA-LGFDID-------YRKLLKAFRSRAIVIRAYYYTTVVG 54
           +   K  +  D + L+ + K       +         K +   +      +A  Y +   
Sbjct: 12  NDELKTVILADISCLFNAVKKSYNSHANRSTINRYIVKYMTKLKHEHPADKAIGYDSKFP 71

Query: 55  DPEQQFSPLHP----LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS 110
           +  +     +     L   L   GF+ V+       +       +  +DV+LA+DA E  
Sbjct: 72  ESFKNRRKSNNETNILHGELKNIGFETVSSPLMYRKQG----IFEKGVDVKLAMDATELI 127

Query: 111 EG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIV 142
                  L+I SGDG F  +     R   +  I+
Sbjct: 128 HSGIFHRLIIVSGDGDFYPVAELAVRNHLEFIII 161


>gi|86741259|ref|YP_481659.1| hypothetical protein Francci3_2568 [Frankia sp. CcI3]
 gi|86568121|gb|ABD11930.1| hypothetical protein Francci3_2568 [Frankia sp. CcI3]
          Length = 199

 Score = 53.1 bits (126), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/118 (14%), Positives = 33/118 (27%), Gaps = 5/118 (4%)

Query: 31  RKLLKAFRSRAIVIRAYYYTTVVGDPEQ---QFSPLHPLLDWLHYNGFQVVAKVAKEFTE 87
           R+++        +     Y        Q     +       W       VV +  +    
Sbjct: 30  RRIVNGRPLGGELAAVRVYRGRPSPDHQPEAARASDRQADRWTRDPRVVVVRRQLRYPKA 89

Query: 88  NCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS 143
                  +  +DV  AVD    +     +  V+FS D      +  ++     V + S
Sbjct: 90  WPAEPAQEKGIDVAFAVDFVRLACEGAYDVGVLFSRDTDLVPALEPVRDLGAHVEVAS 147


>gi|295697550|ref|YP_003590788.1| hypothetical protein Btus_3020 [Bacillus tusciae DSM 2912]
 gi|295413152|gb|ADG07644.1| hypothetical protein Btus_3020 [Bacillus tusciae DSM 2912]
          Length = 297

 Score = 52.7 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 58/158 (36%), Gaps = 16/158 (10%)

Query: 22  KALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKV 81
           + +G ++D+ +L +  +    +   +  T   GD ++    L   L        QV  + 
Sbjct: 21  RGVGKELDFDQLSRVIKEICSLQGHWCGTLAYGDFDRGDYGLQTRL-------LQVGIQP 73

Query: 82  AKEFTENCGRKRVKSSMDVELAVDAFE---QSEGLEHLVIFSGDGCFTTLVAALQRKVKK 138
                   G      ++ +EL++DA E       +   +   GD  +  L   L +  K 
Sbjct: 74  RHVAAREAGELHRD-AVALELSLDALESVHTLPHITDHLFVGGDISWVPLFRRLTQHGKH 132

Query: 139 VTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
           + +        S     LR  A+ F  L + + EI RD
Sbjct: 133 IHLCGF----QSYTHRALREWAETFTALDH-REEITRD 165


>gi|237745115|ref|ZP_04575596.1| predicted protein [Fusobacterium sp. 7_1]
 gi|229432344|gb|EEO42556.1| predicted protein [Fusobacterium sp. 7_1]
          Length = 291

 Score = 52.7 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 58/189 (30%), Gaps = 32/189 (16%)

Query: 5   REKIALFIDGANLYASSKAL------GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58
            + + +FID  N++ +           F  D  ++    R   I+    Y    + D   
Sbjct: 2   EKNVMIFIDYENIHKNLIKKKQNALGSFFFDKIRVWCNNRKLRILDIKVYCNFDIEDLYL 61

Query: 59  QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSM--DVELAVDAFEQS---EGL 113
                                   +E+         K     D+++  D  E+      +
Sbjct: 62  SHHQSK-----------------LQEYGLETFHTANKGKNYADLKITSDLLEELYENSNI 104

Query: 114 EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
           +  +I S D   T L+  ++R  + V + +      S     L+   D    L      I
Sbjct: 105 DGFIIISNDKDMTPLIKIIKRYKEFVYLFTNKDCYDST----LKNFPDELFILEDEVLNI 160

Query: 174 ARDPDEDKK 182
           A   + +K+
Sbjct: 161 ANPKESEKE 169


>gi|213965345|ref|ZP_03393541.1| conserved hypothetical protein [Corynebacterium amycolatum SK46]
 gi|213951961|gb|EEB63347.1| conserved hypothetical protein [Corynebacterium amycolatum SK46]
          Length = 227

 Score = 52.7 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/194 (19%), Positives = 61/194 (31%), Gaps = 45/194 (23%)

Query: 8   IALFI-DGANLYASSKAL-----------------GFDIDYRKLLKAFRSRAIVIRAYYY 49
            AL + D  NL     A+                  + ID  + +       ++  A  +
Sbjct: 19  TALLVWDAPNLDMGLGAILGSRPTAAHRPRFDAVGKWLIDEAERVSHKIGSDVLPEATVF 78

Query: 50  TTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ 109
           T V          + P ++ L   GF V AK              K   D ++  D    
Sbjct: 79  TNV---NPGSAEIVRPWVEALRNVGFAVFAKP-------------KIEEDTDVDPDMIAH 122

Query: 110 S-EGLEH-----LVIFSGDG-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162
                +      +V+ S DG  F  L+  L  +  +VT++         AS  L   A  
Sbjct: 123 IQRRYDEGVLRSVVVASADGQNFQELLEKLASEGIRVTVIGFH----EHASWALASDAIR 178

Query: 163 FMDLAYLKNEIARD 176
           F+DL  +K      
Sbjct: 179 FVDLEEIKGVFREP 192


>gi|159121942|gb|EDP47066.1| hypothetical protein AFUB_102220 [Aspergillus fumigatus A1163]
          Length = 178

 Score = 52.7 bits (125), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 17/59 (28%), Gaps = 5/59 (8%)

Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
           + L  +V    DG FT L A ++     V                     D F+    L
Sbjct: 11  DNLCAVVWRPRDGDFTRLAARIRESGPTVYGFGEHK-----TPRSFVAACDKFIYTENL 64


>gi|322836790|ref|YP_004210704.1| hypothetical protein AciX9_4647 [Acidobacterium sp. MP5ACTX9]
 gi|321165877|gb|ADW71577.1| hypothetical protein AciX9_4647 [Acidobacterium sp. MP5ACTX9]
          Length = 213

 Score = 52.3 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/208 (13%), Positives = 58/208 (27%), Gaps = 39/208 (18%)

Query: 6   EKIALFIDGANLYA-SSKALGFD-IDYRKLLKAFRSR-AIVIRAYYYTTVVGDPEQQ--F 60
           ++  +++DG NLY  + +   F  ++   L+++       ++   Y+T  V         
Sbjct: 5   KRTYVYVDGFNLYYRTLRKTKFKWLNLEALVRSLLDDENEIVCIRYFTAPVSGKFDPGVP 64

Query: 61  SPLHPLLDWLH----------YNGFQVVAKVAKE-----FTENCGRKRVKSSMDVELAVD 105
                 L  L               +   +          T        +   DV LA  
Sbjct: 65  VRQQRYLQALRTLPTVSIHEGNFLTRAKIRPLVHPAPDGPTHVEIWNTEEKGSDVNLATY 124

Query: 106 AFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIV------------STVLSDPSM 151
               +  +  +  V+ S D      V  ++ ++KK   V            +       +
Sbjct: 125 LIHDAWRDLFDVAVVLSQDTDLNEPVRIVRDEIKKSIGVIILDGKAPGKLSTFGSFVRHI 184

Query: 152 ASDQLRRQADYF---MDLAYLKNEIARD 176
               L   A  F   +        + R 
Sbjct: 185 THADL--AASQFPDIIPFGQRGKAVERP 210


>gi|225389922|ref|ZP_03759646.1| hypothetical protein CLOSTASPAR_03672 [Clostridium asparagiforme
           DSM 15981]
 gi|225044002|gb|EEG54248.1| hypothetical protein CLOSTASPAR_03672 [Clostridium asparagiforme
           DSM 15981]
          Length = 232

 Score = 52.3 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 18/57 (31%), Gaps = 5/57 (8%)

Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
             + S D  FT L   L+     V  +    +         R   D F  L  + +E
Sbjct: 2   FCLVSSDSDFTKLAQRLRESGMFVMGIGEQKTPKP-----FRTACDTFKLLEIISSE 53


>gi|328768035|gb|EGF78082.1| hypothetical protein BATDEDRAFT_26780 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 491

 Score = 52.3 bits (124), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 53/159 (33%), Gaps = 27/159 (16%)

Query: 6   EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
             +A+F D  N    +   G+ +  + + K+ R    +     Y  V          +  
Sbjct: 151 PSVAIFWDFENCAPPAAVPGY-VAVQNIRKSLRQFGPI----AYLEVRETF------IKS 199

Query: 66  LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFSGD 122
           +   L  +G  V+                K + D  + VD       +     +V+ SGD
Sbjct: 200 MRSELQSSGCSVIDTP---------HNGRKDAADKMIMVDMLSYIIDTPAPATIVLISGD 250

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
             F   +A LQ +   V ++         AS  LR QA 
Sbjct: 251 RDFLYALAVLQNRGYNVVLIVPNRG----ASPILRAQAS 285


>gi|119489617|ref|ZP_01622377.1| hypothetical protein L8106_08411 [Lyngbya sp. PCC 8106]
 gi|119454529|gb|EAW35677.1| hypothetical protein L8106_08411 [Lyngbya sp. PCC 8106]
          Length = 257

 Score = 51.6 bits (122), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 61/168 (36%), Gaps = 30/168 (17%)

Query: 9   ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68
           A+F D  N+           D   LLK    R  V  +  Y+  +              +
Sbjct: 16  AIFWDYENVP----QFNIASD---LLKFSHQRGNVGASNAYSCNLD---------KKAKN 59

Query: 69  WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA---FEQSEGLEHLVIFSGDGCF 125
            L   GF+ +             K+ K+++D ++A+D     + +   + +++ +GD   
Sbjct: 60  HLQKQGFECIQV-------ENPNKKNKNAVDFQIAIDCFKPIKTNSYPDEIILVTGDCYS 112

Query: 126 TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI 173
             +   L+ + +K+ + +            L+++ D F  +  L   +
Sbjct: 113 LIVQENLKSENRKLIVFA----RRGSDCHSLKKEVDEFYYIDELPKLV 156


>gi|156744147|ref|YP_001434276.1| hypothetical protein Rcas_4231 [Roseiflexus castenholzii DSM 13941]
 gi|156235475|gb|ABU60258.1| hypothetical protein Rcas_4231 [Roseiflexus castenholzii DSM 13941]
          Length = 206

 Score = 51.6 bits (122), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 4/64 (6%)

Query: 111 EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLK 170
            GL+  VI SGDG F  L   L    K V   +      S  +   +   D F+ +   +
Sbjct: 13  PGLDVFVIVSGDGGFAALAKKLHEYGKTVIGCA----YRSAVNKTFQAVCDEFVWITDPE 68

Query: 171 NEIA 174
            ++ 
Sbjct: 69  EKVQ 72


>gi|67921187|ref|ZP_00514706.1| hypothetical protein CwatDRAFT_5542 [Crocosphaera watsonii WH
          8501]
 gi|67857304|gb|EAM52544.1| hypothetical protein CwatDRAFT_5542 [Crocosphaera watsonii WH
          8501]
          Length = 76

 Score = 51.6 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 16/35 (45%), Positives = 25/35 (71%)

Query: 2  FDPREKIALFIDGANLYASSKALGFDIDYRKLLKA 36
           + R ++A+FIDG+NL+ ++  LG +IDY KLL  
Sbjct: 42 LENRGRVAIFIDGSNLFYAALQLGIEIDYTKLLCR 76


>gi|254482849|ref|ZP_05096086.1| hypothetical protein GPB2148_1333 [marine gamma proteobacterium
          HTCC2148]
 gi|214036930|gb|EEB77600.1| hypothetical protein GPB2148_1333 [marine gamma proteobacterium
          HTCC2148]
          Length = 64

 Score = 51.6 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)

Query: 5  REKIALFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58
           EKI++F+D  N+Y + +     + DY +          +I AY Y T  GD +Q
Sbjct: 1  MEKISIFVDVQNIYYTCRQTYQRNFDYNRFWVEITQGRELIGAYAYATDRGDAKQ 55


>gi|120406915|ref|YP_956744.1| hypothetical protein Mvan_5982 [Mycobacterium vanbaalenii PYR-1]
 gi|119959733|gb|ABM16738.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
          Length = 175

 Score = 51.6 bits (122), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 48/159 (30%), Gaps = 28/159 (17%)

Query: 12  IDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLH 71
           +D  NL      +G  +    + + +     +I    YT +      +       L  L 
Sbjct: 34  VDLENL------VGGRVSSSAVREVWSEFGEIIDT-CYTDLTTVAVSRQHAATAFL-ALP 85

Query: 72  YNGFQVVAKVAKEFTENCGRKRVKSSMDVELA--VDAFEQSEGLEHLVIFSGDGCFTTLV 129
            N  +V+                    D+ L   VD    +     +VI SGD  F  L 
Sbjct: 86  ANLHRVI------------GANGPDGADIALIDSVDIGWVAANFGQVVIASGDHIFAPLA 133

Query: 130 AALQRKVKKVT-IVSTVLSDPSMASDQLRRQADYFMDLA 167
             LQR    V  ++          S  L R  +    LA
Sbjct: 134 RRLQRNGLHVIQVIG-----RGACSAALYRACNEQKYLA 167


>gi|288917691|ref|ZP_06412054.1| hypothetical protein FrEUN1fDRAFT_1749 [Frankia sp. EUN1f]
 gi|288350906|gb|EFC85120.1| hypothetical protein FrEUN1fDRAFT_1749 [Frankia sp. EUN1f]
          Length = 108

 Score = 51.2 bits (121), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 16/94 (17%), Positives = 32/94 (34%), Gaps = 3/94 (3%)

Query: 77  VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQR 134
           VV +  +           +  +DV LAVD    +     +  V+FS D      +  ++ 
Sbjct: 3   VVRRQLRYPKAWPAEPAQEKGIDVALAVDFVRLACESAYDVGVLFSRDTDLVPALETVRD 62

Query: 135 KVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
               V + S   +      D       +++D+  
Sbjct: 63  LGAHVEVASWKGTSRLRFPDSQLPWC-HYLDVDD 95


>gi|83591783|ref|YP_425535.1| hypothetical protein Rru_A0443 [Rhodospirillum rubrum ATCC 11170]
 gi|83574697|gb|ABC21248.1| hypothetical protein Rru_A0443 [Rhodospirillum rubrum ATCC 11170]
          Length = 216

 Score = 50.8 bits (120), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 22/165 (13%), Positives = 44/165 (26%), Gaps = 31/165 (18%)

Query: 7   KIALFIDGANL-------------------YASSKALGFDIDYR--------KLLKAFRS 39
           +  +F+D  N                    Y  +K  G+ +D          ++  +F  
Sbjct: 21  RCMIFVDFWNFTLSMKTVEEAFPCDWKALPYVLTKEAGYQVDPSASTEYRGMRVYGSFDG 80

Query: 40  RAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCG--RKRVKSS 97
           +       +  T +                +      +  KV  +        R   +  
Sbjct: 81  KGDANLRKWVKTKLETFPGVSIKFVDRQKKMSGPKCPICYKVIGKCPYCGNDMRGTEEKG 140

Query: 98  MDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVT 140
           +D  +  D    +     +  V+ S D  F  +   L  K  KV 
Sbjct: 141 VDTAIVTDMISLAWENAFDIAVLVSADRDFVPVAEYLHTKGIKVI 185


>gi|260804479|ref|XP_002597115.1| hypothetical protein BRAFLDRAFT_76354 [Branchiostoma floridae]
 gi|229282378|gb|EEN53127.1| hypothetical protein BRAFLDRAFT_76354 [Branchiostoma floridae]
          Length = 555

 Score = 50.8 bits (120), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 27/148 (18%), Positives = 56/148 (37%), Gaps = 35/148 (23%)

Query: 10  LFIDGANLYASSKALGFD-------------IDYRKLLKAFRSRAI-----VIRAYYYTT 51
           +F+D +N++ + K                  I+Y   L    S+       +  A  Y +
Sbjct: 165 VFVDDSNIWIAGKRAAVKQKDLACDEDPRLRIEYGNFLDVLSSKERQTSSVIKIANMYGS 224

Query: 52  VVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE 111
           +    +  +       D +   G++V     KE ++  G+   + ++D +L VDA   + 
Sbjct: 225 IPPPNDSLW-------DKMKEKGWKV---DLKERSKITGK---EKAVDAQLMVDAISFAA 271

Query: 112 GLEH----LVIFSGDGCFTTLVAALQRK 135
             +     +V+ SGD  F  L+  +   
Sbjct: 272 QRKDAGGTIVLISGDKDFLPLINKVLEY 299


>gi|242209571|ref|XP_002470632.1| predicted protein [Postia placenta Mad-698-R]
 gi|220730311|gb|EED84170.1| predicted protein [Postia placenta Mad-698-R]
          Length = 456

 Score = 50.4 bits (119), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 47/141 (33%), Gaps = 16/141 (11%)

Query: 6   EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
           + +A+F D  N    S A G  I    + +  R    V     Y+ +   P  +   L  
Sbjct: 5   DSVAIFWDYENCALPSNATGSII-VNNIAQLARRYGSVKSFRAYSELPEQPSPKNIALRS 63

Query: 66  LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGD 122
            L      G  V+                K   D  + VD    +        +++ +GD
Sbjct: 64  DLQLC---GVSVIDCP---------HNGGKDVADKMMIVDMMAFAIDTPAPATIILITGD 111

Query: 123 GCFTTLVAALQRKVKKVTIVS 143
             F   V+ L  +  ++ +++
Sbjct: 112 RDFVYAVSILSLRQYRLVVLA 132


>gi|121999162|ref|YP_001003949.1| hypothetical protein Hhal_2384 [Halorhodospira halophila SL1]
 gi|121590567|gb|ABM63147.1| conserved hypothetical protein [Halorhodospira halophila SL1]
          Length = 218

 Score = 50.0 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 48/158 (30%), Gaps = 29/158 (18%)

Query: 7   KIALFIDGANLYASS--KALGFDIDYRKLLK--AFRSRAIVIRAYYYTTVVG----DPEQ 58
           +  +++DG NLY     K     +D   L +  A   +  ++   YYT  V     D  +
Sbjct: 2   RTVVYVDGYNLYYGLLRKTAFKWLDLVVLFRDHALDPQVDLVEVRYYTAPVLGRMCDDPK 61

Query: 59  QFSPLHPLLDWLHYN---------GFQVVAKVAKEFTENCGRK----------RVKSSMD 99
                   L  L            G  +     K   +    +            +   D
Sbjct: 62  SPQRQRRYLQALRTMHPERLSIIEGKIIATTPFKRLAQPIPERPDLERVQVLDFHEKKTD 121

Query: 100 VELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRK 135
           V LA D    S     E  V+ S D      +A ++R 
Sbjct: 122 VNLAADLIAGSWVGSYEQAVVCSNDTDLDAALATVRRY 159


>gi|319790520|ref|YP_004152153.1| hypothetical protein Theam_1553 [Thermovibrio ammonificans HB-1]
 gi|317115022|gb|ADU97512.1| hypothetical protein Theam_1553 [Thermovibrio ammonificans HB-1]
          Length = 355

 Score = 50.0 bits (118), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/175 (13%), Positives = 57/175 (32%), Gaps = 31/175 (17%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAI-------------VIRAY 47
           M + R K A+++D  N+Y +  ++ + +   K                       +    
Sbjct: 1   MEERRIKTAIYVDFDNIYGALLSI-YQMAPGKDRNELSPFQAQLLKLLIPEFLKLLKNGI 59

Query: 48  YYTTVVGDPEQQFSPLHPLLDWLH------------YNGFQVVAKVAKEFTENCGRKRVK 95
            +T    D  Q    +    ++ +            +   +V A     F  +  + + K
Sbjct: 60  IFTGGGEDIYQDSRCIKIFAEYHNLPYQARISPPLTHIVQEVGAVTHNPFIPSSKKGKGK 119

Query: 96  SSMDVELAV----DAFEQSEGLEHLVIFSGDGCFTTLVAALQRK-VKKVTIVSTV 145
           ++ DV L +    D   +   ++ +VI + D      +  L+      + + S  
Sbjct: 120 NAADVALVLSVIEDLLIKRIPVDAVVIATCDIDLYPAIRWLKEHTGLSIILASFE 174


>gi|71004032|ref|XP_756682.1| hypothetical protein UM00535.1 [Ustilago maydis 521]
 gi|46095754|gb|EAK80987.1| hypothetical protein UM00535.1 [Ustilago maydis 521]
          Length = 847

 Score = 49.6 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/145 (15%), Positives = 48/145 (33%), Gaps = 15/145 (10%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSR--AIVIRAYYYTTVVGDPEQQFSPLHP 65
           IA+F D  N    + + G  +    +  A ++     ++    Y  +  + +   +    
Sbjct: 90  IAIFWDVDNCAPPTGSSGRSVAL-AVRTAIQNFEIGPIVSFKAYLELSSETQAPNAAQVQ 148

Query: 66  LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGD 122
           L   L   G  ++            +   K   D  +  D    +        +V+ SGD
Sbjct: 149 LRSELQGCGVSLIDTP---------KSGRKDVADKMMITDLLAYAIDQPAPATVVLISGD 199

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLS 147
             F   +  L+ +   V +V+  + 
Sbjct: 200 RDFAYPLGILRNRGYNVVLVTPPIG 224


>gi|189016716|ref|YP_001711755.1| hypothetical protein CMS_pCSL0024 [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|167728887|emb|CAQ03269.1| hypothetical protein pCSL0024 [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 195

 Score = 49.6 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 48/164 (29%), Gaps = 22/164 (13%)

Query: 10  LFIDGANLYASSKA---------LGFDIDYRKLLKAFRSRA--------IVIRAYYYTTV 52
           LFID  NL+ S+               I   K      +           + + + Y  +
Sbjct: 6   LFIDYQNLHFSAWETFTSYGSAVYDSLIHPGKFGDQVLAARAARNFPELELTKIHVYRGL 65

Query: 53  VG---DPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ 109
                +P Q         +W       +  +  K   +       +  +DV LA+   + 
Sbjct: 66  PSRKREPGQHARVQRQASNWTRDPRVVMSLRALKYPRDWPDEPSQEKGIDVLLAIQVVQA 125

Query: 110 S--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151
           S     + L++ + D      +  +Q        ++T      +
Sbjct: 126 SIESAADTLIVSTRDTDILPALELVQSTGNTALELATWKGQSEL 169


>gi|302692514|ref|XP_003035936.1| hypothetical protein SCHCODRAFT_105537 [Schizophyllum commune H4-8]
 gi|300109632|gb|EFJ01034.1| hypothetical protein SCHCODRAFT_105537 [Schizophyllum commune H4-8]
          Length = 837

 Score = 49.6 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 49/156 (31%), Gaps = 18/156 (11%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           + +F D  N   S+   G++I  R + +       V     Y        Q  +    + 
Sbjct: 7   VGIFWDFENCRYSAGRSGYEI-ARAIEQVALEYGTVSDFNAYLD-----MQFCALPATMR 60

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGC 124
             L  +G  +V                K  +D  L  D    +        L++ SGD  
Sbjct: 61  SELQSSGVALVDCP---------HNGQKDVVDQMLQTDMLAYALDHPAPATLILISGDRD 111

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160
           F   V+ L+R+  +V ++      P  +        
Sbjct: 112 FAYTVSVLRRRRYEVVLLCHSQPGPHKSLAWQVSAC 147


>gi|83815599|ref|YP_445763.1| hypothetical protein SRU_1643 [Salinibacter ruber DSM 13855]
 gi|83756993|gb|ABC45106.1| hypothetical protein SRU_1643 [Salinibacter ruber DSM 13855]
          Length = 369

 Score = 49.6 bits (117), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 68/189 (35%), Gaps = 29/189 (15%)

Query: 3   DPREKIALFIDGANLYASSK----------ALGFDIDYRKLLKAFRSRAIVIRAYYYTTV 52
            PR+  A+F+D  NLY+  K          A   +I + ++ +           Y     
Sbjct: 11  PPRQ-AAMFVDYDNLYSILKSQSGRDRSTSAYAEEI-FEEVRRYLEEGDDTPTIYGRAYG 68

Query: 53  VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVD---AFEQ 109
             D     +        LH  G   +   A             ++ +V L +D   A  +
Sbjct: 69  TFDTLLDENDAPVP-SALHREGINPIHVPA---------GMQDNTSEVRLTLDVTQALTR 118

Query: 110 SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD-YFMDLAY 168
              L+ +VI +G+  +  LV  ++ +  +  + +    +P   +D      D  ++D   
Sbjct: 119 RSDLQTVVIITGNRPYLPLVRWIREQGCRPLVAAV---NPPQTADTPSFAEDSRYLDARN 175

Query: 169 LKNEIARDP 177
           L +E +R+ 
Sbjct: 176 LLSEESRED 184


>gi|240141954|ref|YP_002966464.1| hypothetical protein MexAM1_META2p0215 [Methylobacterium extorquens
           AM1]
 gi|254559795|ref|YP_003066890.1| hypothetical protein METDI1275 [Methylobacterium extorquens DM4]
 gi|240011898|gb|ACS43123.1| Hypothetical protein MexAM1_META2p0215 [Methylobacterium extorquens
           AM1]
 gi|254267073|emb|CAX22886.1| hypothetical protein METDI1275 [Methylobacterium extorquens DM4]
          Length = 224

 Score = 49.2 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/174 (14%), Positives = 56/174 (32%), Gaps = 17/174 (9%)

Query: 17  LYASSKALGFDI----DYRKLLKAFRSRA--IVIRAYYYTTVVGDPEQQFSPLHPLLDWL 70
           +Y S   LG       ++ KL ++   R    ++R  + T        +      L+  L
Sbjct: 1   MYHSVNDLGESFLKWCNFWKLGESIIPRQSEELVRVVFCTAYYPGDHSKKIRHERLVRAL 60

Query: 71  HYNGFQVVAKVA-----KEFTENCGR-KRVKSSMDVELAVDAFEQS--EGLEHLVIFSGD 122
              G + +         K         K  + + D+ LA+  ++ +  + ++   + + D
Sbjct: 61  KLVGVETILGHFSKEDAKCRDCGSAWQKPTEKATDINLALSVYDDAVQDAMDTAYLLTAD 120

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
                      ++  K  +VS      + +   L         +A  +  I R 
Sbjct: 121 TDQAATAELFAKRFPKKKLVSVSPPGRTHSQHILSHTPHK---IALNREHIERA 171


>gi|294507660|ref|YP_003571718.1| hypothetical protein SRM_01845 [Salinibacter ruber M8]
 gi|294343988|emb|CBH24766.1| conserved hypothetical protein [Salinibacter ruber M8]
          Length = 369

 Score = 49.2 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 68/189 (35%), Gaps = 29/189 (15%)

Query: 3   DPREKIALFIDGANLYASSK----------ALGFDIDYRKLLKAFRSRAIVIRAYYYTTV 52
            PR+  A+F+D  NLY+  K          A   +I + ++ +           Y     
Sbjct: 11  PPRQ-AAMFVDYDNLYSILKSQSGRDRSTSAYAEEI-FEEVRRYLEEGDDTPTIYGRAYG 68

Query: 53  VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVD---AFEQ 109
             D     +        LH  G   +   A             ++ +V L +D   A  +
Sbjct: 69  TFDTLLDENDAPVP-SALHREGINPIHVPA---------GMQDNTSEVRLTLDVTQALTR 118

Query: 110 SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD-YFMDLAY 168
              L+ +VI +G+  +  LV  ++ +  +  + +    +P   +D      D  ++D   
Sbjct: 119 RSDLQTVVIITGNRPYLPLVRWIREQGCRPLVAAV---NPPQTADTPSFAEDSRYLDARN 175

Query: 169 LKNEIARDP 177
           L +E +R+ 
Sbjct: 176 LLSEESRED 184


>gi|323508074|emb|CBQ67945.1| conserved hypothetical protein [Sporisorium reilianum]
          Length = 856

 Score = 49.2 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/150 (15%), Positives = 50/150 (33%), Gaps = 15/150 (10%)

Query: 3   DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSR--AIVIRAYYYTTVVGDPEQQF 60
           +  E IA+F D  N    + + G  +    +  A ++     ++    Y  +  + +   
Sbjct: 86  EDTEPIAIFWDVDNCAPPTGSSGRSVAL-AVRSAIQNLDVGPIVSFKAYLELSSETQAPN 144

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLV 117
           +    L   L   G  ++            +   K   D  +  D    +        +V
Sbjct: 145 AAQVQLRSELQGCGVSLIDTP---------KSGRKDVADKMMITDLLAYAIDQPAPATVV 195

Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLS 147
           + SGD  F   +  L+ +   V +V+  + 
Sbjct: 196 LISGDRDFAYPLGILRNRGYNVVLVTPPIG 225


>gi|296125472|ref|YP_003632724.1| hypothetical protein Bmur_0422 [Brachyspira murdochii DSM 12563]
 gi|296017288|gb|ADG70525.1| protein of unknown function DUF88 [Brachyspira murdochii DSM 12563]
          Length = 455

 Score = 49.2 bits (116), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 63/160 (39%), Gaps = 19/160 (11%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
            +KI ++ID  N+    + L F ++ + +LK            YY   + D +  FS   
Sbjct: 1   MKKIGIYIDLENI----RYLDFHVNLKSMLKNILD--------YYKEQLKDEDIVFSIKK 48

Query: 65  PLLDWLHYNGFQVVAKVAKE-FTENCGRKRVKSSMDVELAVDAFEQ---SEGLEHLVIFS 120
              D      +    +        +   K+ K+  D++ ++DAFE     + ++ ++  +
Sbjct: 49  AYGDSKSIKKYAKHLRDLHIDIIHSVPFKKAKNMADMKSSLDAFEDFIIYKKIDIIIFVT 108

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160
            D  ++ ++  L R    V++V+T  +         +   
Sbjct: 109 KDVDYSIVMDKLMRHGCIVSMVTTSDNFEKNI---FQNAC 145


>gi|226363405|ref|YP_002781187.1| hypothetical protein ROP_39950 [Rhodococcus opacus B4]
 gi|226241894|dbj|BAH52242.1| hypothetical protein [Rhodococcus opacus B4]
          Length = 208

 Score = 48.9 bits (115), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/152 (9%), Positives = 48/152 (31%), Gaps = 25/152 (16%)

Query: 6   EKIALFIDGANLYASSK---ALGFDIDYRKLLKAFRSRAIVIRAYY-------------- 48
           +++A+ +D  N++ +++          +  LL        +++A                
Sbjct: 5   QRVAVVVDYQNMHLTARGKFTPEGTPTHESLLHPLLLAQQILKARANAKGADTPPADIAK 64

Query: 49  ---YTTVVG---DPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVEL 102
              Y  +     D            +W   +  +V  +  +    +      +  +DV +
Sbjct: 65  VEVYRGLPSNEHDSTSYRRSQAQRAEWTRDSRVEVTYRPLRYRYVHNILTPQEKGVDVLV 124

Query: 103 AVDAFEQ--SEGLEHLVIFSGDGCFTTLVAAL 132
           A++  +   S   + +++ + D      +   
Sbjct: 125 ALNFVQAVVSGEYDVVILAAHDTDLEPALEMA 156


>gi|171692967|ref|XP_001911408.1| hypothetical protein [Podospora anserina S mat+]
 gi|170946432|emb|CAP73233.1| unnamed protein product [Podospora anserina S mat+]
          Length = 465

 Score = 48.5 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/170 (10%), Positives = 49/170 (28%), Gaps = 26/170 (15%)

Query: 1   MFDPREKIALFIDGANLYASSKAL------------------GFDIDYRKLLKAFRSRAI 42
           M    ++  LF+D +N++  ++                       I+  +L+       I
Sbjct: 1   MDADNDECLLFVDDSNVWIEAQKFAASGNSHMPKLTDGDQDPRLRINIGRLVNTLCDGRI 60

Query: 43  VIRAYYYTTVVGDPEQQFSPLHP--LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDV 100
             ++Y Y +     +  +           ++  G     K       +      + ++D+
Sbjct: 61  QRQSYIYGSRPPPNDLVWDQYKKCSFKTKIYDRGANGREKEV---DNSMSADMTEEAVDL 117

Query: 101 ELAV---DAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLS 147
                   A E+       ++ +GD      +  +     +V +      
Sbjct: 118 RAVAKFDQAVEERRKRTVFIVITGDRDMLPAIRKVLGCGIRVELWGWNSG 167


>gi|119887743|gb|ABM05923.1| NicB [Pseudomonas putida]
          Length = 312

 Score = 48.5 bits (114), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 60/201 (29%), Gaps = 47/201 (23%)

Query: 7   KIALFIDGANLYASSKA--LGFDIDYRKLLKA-------FRSRAIVIRAY--------YY 49
           +  ++IDG N Y           +D   L +               IRA+         Y
Sbjct: 11  RTRIYIDGYNFYYGCLRGTPYKWLDLLPLFEKHILPSILVTDNHGQIRAWRLLESPSIKY 70

Query: 50  --------TTVVGDPEQQFSPLHPLLDWLHYNGFQVV-------------------AKVA 82
                       GD     +  H  L  LH    +++                    K  
Sbjct: 71  FTAKIIESVARAGDSVSSQARYHTALRKLHDGRIELIEGYYAVNKMKVKIVDPENPDKAP 130

Query: 83  KEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRK-VKKV 139
           +E  E    K  +   DV LA+ A+  S    ++H VI + D      +  ++     ++
Sbjct: 131 RECREIQAWKVEEKQSDVNLALQAYHDSITGQVDHAVIVTNDTDIAPALQMIRAHTDVRI 190

Query: 140 TIVSTVLSDPSMASDQLRRQA 160
            +V         A+  L + A
Sbjct: 191 GVVVPTSGQNRSANTDLIKFA 211


>gi|16519880|ref|NP_444000.1| hypothetical 23.5 kDa protein [Sinorhizobium fredii NGR234]
 gi|2496724|sp|P55589|Y4OD_RHISN RecName: Full=Uncharacterized protein y4oD
 gi|2182554|gb|AAB91797.1| hypothetical 23.5 kDa protein [Sinorhizobium fredii NGR234]
          Length = 214

 Score = 48.1 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 30/82 (36%), Gaps = 3/82 (3%)

Query: 82  AKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKV 139
            K        +  +  +D  +  D  E +    +  +V+ SGD      V   Q    +V
Sbjct: 14  IKLRLGFINGQGQQKGVDSLIVTDLIELARQRAISEVVLLSGDEDVRVGVQIAQNYGVRV 73

Query: 140 TIVSTVLSDPSMASDQLRRQAD 161
            ++  +       S  LR++AD
Sbjct: 74  HLLG-IHPARGSQSPTLRQEAD 94


>gi|148905892|gb|ABR16108.1| unknown [Picea sitchensis]
          Length = 593

 Score = 48.1 bits (113), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 53/163 (32%), Gaps = 25/163 (15%)

Query: 8   IALFIDGAN--LYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
           +A+  D  N  + A  +A     + R  L+      ++  A  + +  GD          
Sbjct: 45  VAILWDIENCPVPAEVRAEDVASNIRVALRL---HPVIKGAVTFFSAYGDFNN---FPRK 98

Query: 66  LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGD 122
           L +     G  ++                K + D  + VD F  +        +++ SGD
Sbjct: 99  LREGCQRTGVNLIDVP----------SGKKDAADKAILVDMFLFALDNPPPSTILLISGD 148

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165
             F   +  L ++   V +++         S  L   A  F+ 
Sbjct: 149 VDFAPALHKLGQRGYTV-VLAIPAGVG--VSSALCN-AGRFVW 187


>gi|300702658|ref|YP_003744258.1| hypothetical protein RCFBP_10301 [Ralstonia solanacearum CFBP2957]
 gi|299070319|emb|CBJ41611.1| conserved protein of unknown function [Ralstonia solanacearum
           CFBP2957]
          Length = 309

 Score = 48.1 bits (113), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 27/199 (13%), Positives = 57/199 (28%), Gaps = 45/199 (22%)

Query: 7   KIALFIDGANLYASSKA--LGFDIDYRKLLKA-------FRSRAIVIR------------ 45
           +  +++DG N Y           +D  KL +               +R            
Sbjct: 12  RTRVYVDGYNFYYGCLKGTHHKWLDLYKLFQEHVLPSALIERDGQYVRSELLTEAVQFFT 71

Query: 46  -----------------AYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQV-VAKVAKEFTE 87
                            A Y+T +    + +   +            ++  AK      +
Sbjct: 72  ATIIERAAKAHDSVSSQARYHTALRKRHDGRIRIVEGYYSVAKARAPRIDAAKPDAWPRD 131

Query: 88  N---CGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRK-VKKVTI 141
                  +  +   DV LA+ A+  +    ++H+VI S D      +  ++      V +
Sbjct: 132 CERVPIWRLEEKQTDVNLALHAYHDAMTAQVDHVVIASNDTDLVPALRMIREHTSVTVGL 191

Query: 142 VSTVLSDPSMASDQLRRQA 160
           V          ++ L + A
Sbjct: 192 VIPTRDSERRPNEDLAKYA 210


>gi|302692534|ref|XP_003035946.1| hypothetical protein SCHCODRAFT_232516 [Schizophyllum commune H4-8]
 gi|300109642|gb|EFJ01044.1| hypothetical protein SCHCODRAFT_232516 [Schizophyllum commune H4-8]
          Length = 1064

 Score = 47.7 bits (112), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 51/165 (30%), Gaps = 33/165 (20%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           + +  D  N+               L K +     V R         D   Q+  ++   
Sbjct: 11  VGILWDYENV--------------PLPKGYSGYGAVQRIR-------DIALQYGTINLFK 49

Query: 68  DWLHYNGFQVVAKVAKEFTE----NCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFS 120
            ++   G     +   + +     +      K   D  L VD    +        +V+ S
Sbjct: 50  AYMEVKGHATNVRAELQISGVSLTDTPHVGYKDVADQMLQVDMLVFAWDNPPPTTIVLIS 109

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165
           GD  F    A L+ +  ++ I+S   +        LR QA +  D
Sbjct: 110 GDRDFAYAAAILRNRNFRIVIISPAQAV-----TCLREQATHVYD 149


>gi|227488269|ref|ZP_03918585.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
           ATCC 51867]
 gi|227091839|gb|EEI27151.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
           ATCC 51867]
          Length = 237

 Score = 47.7 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 26/208 (12%), Positives = 59/208 (28%), Gaps = 60/208 (28%)

Query: 8   IALFIDGANLYASSKALGFDID------YRKLLKAFRSR-----AIVIRAYYYTTVVGDP 56
            A+ IDG   +   +A     D       ++L+   R       A + R +YY     + 
Sbjct: 24  TAILIDGG--FYRRRAYSLFGDKDPVARAKELVAYARRHIEKSNANLYRIFYYDCPPSEK 81

Query: 57  ---------------EQQFSPLHPLLDWLHY---------------NGFQVVAKVAKEFT 86
                            Q+       + L +               NG+ +  +  K+  
Sbjct: 82  VLYHPLLKKQVNLAKTPQYKWSITFFEELIHKRKVALRRGEELRTQNGYLLKPETVKKLC 141

Query: 87  -----------ENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQ 133
                      ++      +  +D+ + +D    ++   +  +V+ +GD  F       +
Sbjct: 142 AGKIQVKDLTEDDFSLDINQKGVDMRIGLDIASLAQQGIVNQIVMITGDSDFVPAAKHAR 201

Query: 134 RKVKKVTIVSTVLSDPSMASDQLRRQAD 161
           R      +        +  +  L    D
Sbjct: 202 RMGIDFIL----DPMWANIAPSLSEHVD 225


>gi|296130250|ref|YP_003637500.1| hypothetical protein Cfla_2411 [Cellulomonas flavigena DSM 20109]
 gi|296022065|gb|ADG75301.1| conserved hypothetical protein [Cellulomonas flavigena DSM 20109]
          Length = 187

 Score = 47.7 bits (112), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 22/161 (13%), Positives = 54/161 (33%), Gaps = 27/161 (16%)

Query: 10  LFIDGANLYASSKA--------LGFDIDYRKLLKAFRS-RAIVIRAYYYTTVVGDPEQQF 60
           L +DG N+ A+  +              + ++L   +      ++A ++           
Sbjct: 9   LLVDGENIDATLGSSILGGRPTPEQRPRWERVLTFAQQAWGQPVKALFFLNASNGTLP-- 66

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
                 +  L   GF  +    + +         +  +D+ +       ++    +++ S
Sbjct: 67  ---MSFVQALTAIGFVPIPLSGESY---------EKVVDIGIKRTLEAIADRDGDVLLAS 114

Query: 121 GDGCFTTLVAALQRKVKKVTIVST----VLSDPSMASDQLR 157
            DG F   VA L    ++V +++       S   + +  LR
Sbjct: 115 HDGDFAPEVAQLVDAGRQVGLLAFREFTSQSLAGLTARGLR 155


>gi|227542867|ref|ZP_03972916.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
           ATCC 51866]
 gi|227181372|gb|EEI62344.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
           ATCC 51866]
          Length = 182

 Score = 47.3 bits (111), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 10/98 (10%), Positives = 35/98 (35%), Gaps = 12/98 (12%)

Query: 87  ENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVST 144
           ++      +  +D+ + +D    ++   +  +V+ +GD  F       +R      +   
Sbjct: 67  DDFSLDINQKGVDMRIGLDIASLAQQGIVNQIVMITGDSDFVPAAKHARRMGIDFIL--- 123

Query: 145 VLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDKK 182
                +  +  L    D       +++ + ++P+   +
Sbjct: 124 -DPMWANIAPSLSEHVD------GVRSCVPKEPNAQNE 154


>gi|168020521|ref|XP_001762791.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162685900|gb|EDQ72292.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 474

 Score = 47.3 bits (111), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 45/163 (27%), Gaps = 26/163 (15%)

Query: 8   IALFIDGAN--LYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
           +A+  D  N  +     A     + R  L+       V     Y                
Sbjct: 18  VAILWDIENCPVPGEVNAEDVAGNIRIALREHPHVGAVTMFSAYGDFN-------HFPRK 70

Query: 66  LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGD 122
           + +     G  ++                K + D  + VD F  +        + + +GD
Sbjct: 71  VREGCQRTGVNLIDVP----------NGKKDAADKAILVDMFLFALDNPPPSTIFLITGD 120

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165
             F   +  L ++   V ++          S  LR  A  F+ 
Sbjct: 121 VDFAPALHKLGQRG-YVVVLVIPDGVG--VSSALR-GAGRFVY 159


>gi|226326984|ref|ZP_03802502.1| hypothetical protein PROPEN_00844 [Proteus penneri ATCC 35198]
 gi|225204821|gb|EEG87175.1| hypothetical protein PROPEN_00844 [Proteus penneri ATCC 35198]
          Length = 264

 Score = 47.3 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/101 (13%), Positives = 35/101 (34%), Gaps = 9/101 (8%)

Query: 86  TENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVS 143
             +      +  +D++L VD    ++   ++ +V+F+GD  F       +       +  
Sbjct: 149 NNDFYYSIRQKGVDIKLGVDITSIAQKKLVDKIVLFAGDSDFVPAAKLARTNGIDFVL-- 206

Query: 144 TVLSDPSMASDQLRRQADYFMDLA---YLKNEIARDPDEDK 181
              +  +  +  L    D  +       LK+ + + P    
Sbjct: 207 --DALRNNIAPSLHEHIDGLVSYDLVAILKDILGKPPTTTP 245


>gi|224103613|ref|XP_002313122.1| predicted protein [Populus trichocarpa]
 gi|222849530|gb|EEE87077.1| predicted protein [Populus trichocarpa]
          Length = 504

 Score = 47.3 bits (111), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 47/138 (34%), Gaps = 17/138 (12%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           +A+  D  N    S     D+    +  A +   ++  A    +  GD     S    L 
Sbjct: 20  VAILWDIENCPVPSDVRSEDV-AGNIRMALQVHPVIKGAVMMFSAYGDFN---SFPRRLR 75

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGC 124
           +     G +++                K + D  + VD F  +        +++ SGD  
Sbjct: 76  EGCQRTGVKLIDVP----------NGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVD 125

Query: 125 FTTLVAALQRKVKKVTIV 142
           F+  +  L ++   V +V
Sbjct: 126 FSPALHILGQRGYTVILV 143


>gi|227505745|ref|ZP_03935794.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940]
 gi|227197713|gb|EEI77761.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940]
          Length = 198

 Score = 46.9 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 43/115 (37%), Gaps = 14/115 (12%)

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
           + P ++ +   GF V AK          +      +D ++     E  + L+ +++ S D
Sbjct: 68  IRPWVEAIRNVGFAVFAKP---------KLHEDDDVDPDMIAYIQENRDNLDSVIVASAD 118

Query: 123 G-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
           G  F +L+  L  + K V ++          + +       F+DL  ++      
Sbjct: 119 GQNFQSLLEELAAEGKPVCVLGFHEHASWAVTHEDI----EFVDLEDIEGVFREP 169


>gi|254252774|ref|ZP_04946092.1| hypothetical protein BDAG_02014 [Burkholderia dolosa AUO158]
 gi|124895383|gb|EAY69263.1| hypothetical protein BDAG_02014 [Burkholderia dolosa AUO158]
          Length = 211

 Score = 46.9 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/104 (14%), Positives = 35/104 (33%), Gaps = 18/104 (17%)

Query: 1   MFDPREKI--ALFIDGANLYASSKALGF-DIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
           M  P + +  A+F D  N+    +   +   D + +L+    +  ++    Y        
Sbjct: 1   MALPLDNVSMAVFCDFENVALGVRDAKYEKFDIKPVLERLLLKGSIVVKKAYC------- 53

Query: 58  QQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVE 101
             +         +H   F+++            R+  K+S D+ 
Sbjct: 54  -DWDRYKGFKAAMHEASFELIEIPHV-------RQSGKNSADIR 89


>gi|302692518|ref|XP_003035938.1| hypothetical protein SCHCODRAFT_105540 [Schizophyllum commune H4-8]
 gi|300109634|gb|EFJ01036.1| hypothetical protein SCHCODRAFT_105540 [Schizophyllum commune H4-8]
          Length = 710

 Score = 46.9 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 54/161 (33%), Gaps = 21/161 (13%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           + +F D  N    S   GFD+  + + +   +   +     Y  +     QQ +    + 
Sbjct: 4   VGIFWDYENCQFMSGCSGFDV-AKNIERVALAHGPIASFNAYLDL-----QQCAVPASMR 57

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGC 124
             L   G  +V                K  +D  L  D    +        +V+ SGD  
Sbjct: 58  SELQSTGVALVDCP---------HNGQKDVVDQMLQTDMLVFALDHPAPATIVLISGDRD 108

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165
           F  + + L+R++  V ++      P      L +Q    +D
Sbjct: 109 FAYVASILRRRMYNVVLICHSTPGPH---KSLLQQVSTHID 146


>gi|257486916|ref|ZP_05640957.1| hypothetical protein PsyrptA_26815 [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 229

 Score = 46.9 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 49/165 (29%), Gaps = 37/165 (22%)

Query: 7   KIALFIDGANLYASSKA--LGFDIDYRKLLKAFRS----RAIVIRAYYYTTVVGDPEQQF 60
           + A F+DG NL+    A      +D   LL            +    ++T+ V       
Sbjct: 2   RTACFVDGYNLFYGLLAGTKYKWLDLPSLLAHILRVEHPENTLASVSFFTSGVKPSLASR 61

Query: 61  -----SPLHPLLDWLHYNGFQV-----------------VAKVAKEFTENCGRKRVKSSM 98
                      L  L   G  V                  +  A    +    K  +   
Sbjct: 62  GILSKEAQDSYLRALIARGVSVNYGRHQLESGKAPRFVDKSTPASRLDQVDIWKLEEKET 121

Query: 99  DVELAVDAFEQS---------EGLEHLVIFSGDGCFTTLVAALQR 134
           DV +A+  +  +         + L+ LV+ S D   T  + AL+ 
Sbjct: 122 DVHIAISMYRLAARQAGLMQEDRLQQLVLVSADTDMTPALRALRE 166


>gi|91200595|emb|CAJ73644.1| hypothetical protein kuste2892 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 165

 Score = 46.9 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 49/125 (39%), Gaps = 18/125 (14%)

Query: 44  IRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELA 103
           IR Y++++  G  +      + L   L   GF+ V    K+  +       +  +D+ L 
Sbjct: 34  IRRYWFSSYKGSEDIG----NNLKTELRCLGFEPVL--FKKRGD------REKGVDIALT 81

Query: 104 VDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
            +    +  +  +   + + D  +  LV  ++R  + V             S  L+ + D
Sbjct: 82  REMLINAFNQNFDIGFLITSDEDYVVLVKDVKRYGQIVGGGFFKNGL----SKHLKVEFD 137

Query: 162 YFMDL 166
           +F++L
Sbjct: 138 HFIEL 142


>gi|167999628|ref|XP_001752519.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162696419|gb|EDQ82758.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 465

 Score = 46.9 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 47/163 (28%), Gaps = 26/163 (15%)

Query: 8   IALFIDGAN--LYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
           +A+  D  N  +     A     + R  L+       V     Y                
Sbjct: 18  VAILWDIENCPVPGEVNAEDVAGNIRIALREHPHVGAVTMFSAYGDFN-------HFPRK 70

Query: 66  LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGD 122
           + +     G  ++                K + D  + VD F  +        + + +GD
Sbjct: 71  VREGCQRTGVNLIDVP----------NGKKDAADKAILVDMFLFALDNPPPSTIFLITGD 120

Query: 123 GCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165
             F   +  L    ++  +V  V+ D    S  LR  A  F+ 
Sbjct: 121 VDFAPALHKL---GQRGYVVVLVIPDGVGVSSALR-GAGRFVY 159


>gi|297741265|emb|CBI32396.3| unnamed protein product [Vitis vinifera]
          Length = 437

 Score = 46.9 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/142 (17%), Positives = 47/142 (33%), Gaps = 17/142 (11%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
           P   +A+  D  N    S     D+    +  A R   ++  A    +  GD     +  
Sbjct: 43  PHGSVAILWDIENCPVPSDVRPEDV-AGNIRMALRVHPVIRGAVTMFSAYGDFN---AFP 98

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFS 120
             L +     G +++                K + D  + VD F  +        +++ S
Sbjct: 99  RRLREGCQRTGVKLIDVP----------NGRKDAADKAILVDMFLFALDNPPPSSIMLIS 148

Query: 121 GDGCFTTLVAALQRKVKKVTIV 142
           GD  F   +  L ++   V +V
Sbjct: 149 GDVDFAPALHILGQRGYTVILV 170


>gi|225428830|ref|XP_002282292.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 1361

 Score = 46.9 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/142 (17%), Positives = 47/142 (33%), Gaps = 17/142 (11%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
           P   +A+  D  N    S     D+    +  A R   ++  A    +  GD     +  
Sbjct: 111 PHGSVAILWDIENCPVPSDVRPEDV-AGNIRMALRVHPVIRGAVTMFSAYGDFN---AFP 166

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFS 120
             L +     G +++                K + D  + VD F  +        +++ S
Sbjct: 167 RRLREGCQRTGVKLIDVP----------NGRKDAADKAILVDMFLFALDNPPPSSIMLIS 216

Query: 121 GDGCFTTLVAALQRKVKKVTIV 142
           GD  F   +  L ++   V +V
Sbjct: 217 GDVDFAPALHILGQRGYTVILV 238


>gi|170093986|ref|XP_001878214.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164646668|gb|EDR10913.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 620

 Score = 46.9 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/148 (18%), Positives = 50/148 (33%), Gaps = 10/148 (6%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           +A+F D      +S   G+DI              +    + T         FS L  L 
Sbjct: 7   VAIFWDFEGTRTASNISGYDI---------AKNIRLTGQIFGTVKSFRSYYDFSALTSLR 57

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTT 127
           +    +  Q       +     G+      M V+L + A +        +I + D  F  
Sbjct: 58  NPNLRHELQSSGISLIDCPSAGGKNIATKMMMVDLIIHALDH-PAPTTFLIITADRDFGY 116

Query: 128 LVAALQRKVKKVTIVSTVLSDPSMASDQ 155
            +A L+ +  +V ++S   + P + S  
Sbjct: 117 AIATLRLRKYRVVLLSPPGTHPDVTSQA 144


>gi|147795296|emb|CAN64994.1| hypothetical protein VITISV_001778 [Vitis vinifera]
          Length = 531

 Score = 46.9 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/142 (17%), Positives = 47/142 (33%), Gaps = 17/142 (11%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
           P   +A+  D  N    S     D+    +  A R   ++  A    +  GD     +  
Sbjct: 43  PHGSVAILWDIENCPVPSDVRPEDV-AGNIRMALRVHPVIRGAVTMFSAYGDFN---AFP 98

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFS 120
             L +     G +++                K + D  + VD F  +        +++ S
Sbjct: 99  RRLREGCQRTGVKLIDVP----------NGRKDAADKAILVDMFLFALDNPPPSSIMLIS 148

Query: 121 GDGCFTTLVAALQRKVKKVTIV 142
           GD  F   +  L ++   V +V
Sbjct: 149 GDVDFAPALHILGQRGYTVILV 170


>gi|160896436|ref|YP_001562018.1| hypothetical protein Daci_0987 [Delftia acidovorans SPH-1]
 gi|160362020|gb|ABX33633.1| conserved hypothetical protein [Delftia acidovorans SPH-1]
          Length = 234

 Score = 46.9 bits (110), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 43/161 (26%), Gaps = 33/161 (20%)

Query: 7   KIALFIDGANLYASSKA--LGFDIDYRKLLKAFR-----SRAIVIRAYYYTTVVGDPEQQ 59
           +  ++IDG NLY S         +D   L +          A V+   Y+T  V     +
Sbjct: 8   RTTIYIDGYNLYYSRLKGTPYKWLDIAALFRDRILLPQDPGAEVVAIKYFTAPVKASYAR 67

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCG------------------------RKRVK 95
                      +    Q       +                                  +
Sbjct: 68  HGEASVQAQTQYLRALQARDPGLIQIVNGFHVFEPTSLPSYQAGANPSKNNVSRVWMIEE 127

Query: 96  SSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQR 134
              DV LA+ A+  +     + LVI S D      +  L+ 
Sbjct: 128 KQTDVNLALHAYRDAVRGECDQLVICSNDSDVEPALRMLRE 168


>gi|224123372|ref|XP_002330299.1| predicted protein [Populus trichocarpa]
 gi|222871334|gb|EEF08465.1| predicted protein [Populus trichocarpa]
          Length = 531

 Score = 46.6 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 47/138 (34%), Gaps = 17/138 (12%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           +A+  D  N    S     D+    +  A R   ++  A    +  GD     S    L 
Sbjct: 47  VAILWDIENCRVPSDVRPEDV-AGNIRMALRVHPVIKGAVMMFSAYGDFN---SFSRRLR 102

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGC 124
           +     G ++V                K + D  + VD F  +        +++ SGD  
Sbjct: 103 EGCQRTGVKLVDVP----------NGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVD 152

Query: 125 FTTLVAALQRKVKKVTIV 142
           F+  +  L ++   V +V
Sbjct: 153 FSPALHILGQRGYTVILV 170


>gi|330880020|gb|EGH14169.1| hypothetical protein PSYMP_26883 [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 229

 Score = 46.6 bits (109), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 50/165 (30%), Gaps = 37/165 (22%)

Query: 7   KIALFIDGANLYASSKA--LGFDIDYRKLLKAFRS----RAIVIRAYYYTTVVGDPEQQF 60
           + A F+DG NL+    A      +D   LL            +    ++TT V       
Sbjct: 2   RTACFVDGYNLFYGLLAGTPYKWLDLPSLLAHIIRVEYPDNTLDAVSFFTTGVMPTLATR 61

Query: 61  -----SPLHPLLDWLHYNGFQVVAKVAKE----------------FTENCGRKR-VKSSM 98
                      +  L   G +V+    +                   +  G  +  +   
Sbjct: 62  GTLSKEAQDTYVRALKVRGVEVLYGRHQLEPRNAPRFVDKDTPASRADQVGIWKLEEKET 121

Query: 99  DVELAVDAFEQSE---------GLEHLVIFSGDGCFTTLVAALQR 134
           DV +A+  +  +           ++ +V+ S D   T  + A++ 
Sbjct: 122 DVHIAISMYRLASRQMALPPEARIQQIVLVSADTDMTPSLRAIRE 166


>gi|301117798|ref|XP_002906627.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262107976|gb|EEY66028.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 173

 Score = 46.2 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 39/118 (33%), Gaps = 12/118 (10%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ------F 60
           + AL IDG+     ++ALG  IDY KL  A   +A       +        Q+       
Sbjct: 18  RAALIIDGSYAMIGARALGGKIDYIKLRSALEDQASTQFGDCWFFDQNPSAQRVNPALTA 77

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRK------RVKSSMDVELAVDAFEQSEG 112
                         FQV     K++  +C R        V+  +D  +A      +  
Sbjct: 78  EYHMLKFAPPDGPQFQVSLFPMKKYNCHCRRCGNHFTQNVQKGVDNGIATKILSLAYE 135


>gi|162148603|ref|YP_001603064.1| hypothetical protein GDI_2830 [Gluconacetobacter diazotrophicus PAl
           5]
 gi|161787180|emb|CAP56773.1| hypothetical protein GDI2830 [Gluconacetobacter diazotrophicus PAl
           5]
          Length = 199

 Score = 46.2 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 61/192 (31%), Gaps = 38/192 (19%)

Query: 5   REKIALFIDGANLYASSKAL---------GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGD 55
            +++ +  D +N++ S ++          GF I +  L+        + + +   +V   
Sbjct: 2   NDRVHIIWDNSNIFHSGRSTGDILERRTDGFRIYFENLIDLAADGRPIEQVFCVGSVPPP 61

Query: 56  PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGL-- 113
               +  +  L                 E     GR   + ++D  L V           
Sbjct: 62  TNSVWGHIERLTGKKPE---------LFERGAASGR---EQAVDQALQVRMLRLGFDYRP 109

Query: 114 -EHLVIFSGDGC-------FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY--- 162
            E +V+ +GDG        F      L     KV +++      +    ++R  A+    
Sbjct: 110 PETIVLLTGDGSGYEDGTGFFADAERLHNFGWKVEVLA----WQNHCKREMRNWAETNGV 165

Query: 163 FMDLAYLKNEIA 174
           F+ L    + I 
Sbjct: 166 FVPLDDFYSSIT 177


>gi|225389921|ref|ZP_03759645.1| hypothetical protein CLOSTASPAR_03671 [Clostridium asparagiforme
           DSM 15981]
 gi|225044022|gb|EEG54268.1| hypothetical protein CLOSTASPAR_03671 [Clostridium asparagiforme
           DSM 15981]
          Length = 84

 Score = 46.2 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 39/106 (36%), Gaps = 22/106 (20%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M     + A+ ID  N+  S K + +      +L     + I      Y     + ++ +
Sbjct: 1   MEQNDRRFAVLIDADNV--SPKYIKY------ILDEVSDQGIATYKRIYGDWTDNEKRSW 52

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA 106
             +  LLDW             ++++   G    K++ D  + +DA
Sbjct: 53  KNV--LLDWS--------VNPIQQYSYTTG----KNATDSAMIIDA 84


>gi|294666413|ref|ZP_06731658.1| GCN5-related N-acetyltransferase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292603817|gb|EFF47223.1| GCN5-related N-acetyltransferase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 276

 Score = 46.2 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 65/217 (29%), Gaps = 42/217 (19%)

Query: 8   IALFIDGANLYAS-SKALGFD-IDYRKLLKAFRSRAI----VIRAYYYTT---------- 51
            A++IDG NLY    +   F  +D   L             ++   Y+T           
Sbjct: 49  TAVYIDGYNLYYGRIRGTAFKWLDVVTLFDRLLHDQDPTTDLLHVRYFTASALGRFATHK 108

Query: 52  -------------VVGDPEQQFSPLHPLLDWLHY---NGFQVVAKVAKEFTENCGRKRVK 95
                        +     Q+F+       W          V  +           K  +
Sbjct: 109 QASEIAQTTYLRALAHTHPQRFTTTLGKHSWDKGGTLLAEFVSGQPYDRTRRVRVWKLEE 168

Query: 96  SSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKK-VTIVSTVLSDP--- 149
              DV LA+  +  +     E LV+ S D      +AA++      V  + T    P   
Sbjct: 169 KQTDVNLALAMYRDAASGRYEQLVVCSNDSDIAPALAAIREDFPTIVLGMVTPRRPPVDG 228

Query: 150 ---SMASDQLRRQADYF-MDLAYLKNEIARDPDEDKK 182
                 S  L R AD+    +   +   A+ P+  +K
Sbjct: 229 EADRRVSVSLSRCADWIRHYILDDELATAQLPERVRK 265


>gi|289668076|ref|ZP_06489151.1| hypothetical protein XcampmN_06148 [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 250

 Score = 46.2 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 67/217 (30%), Gaps = 42/217 (19%)

Query: 8   IALFIDGANLYAS-SKALGFD-IDYRKLLKAFRSRA----IVIRAYYYT----------- 50
            A++IDG NLY    +   F  +D   L             ++   Y+T           
Sbjct: 7   TAVYIDGYNLYYGRIRGTAFKWLDVVALFDRLLHDQDPSTELLHVRYFTAPALGRFATNK 66

Query: 51  ------------TVVGDPEQQFSPLHPLLDWLHYNGFQ---VVAKVAKEFTENCGRKRVK 95
                        +     Q+F+       W     F    V  +           K  +
Sbjct: 67  QASEIAQTTYLRALAHTHPQRFTTTLGKHSWDKGGAFLAEFVSGQPYDRTRRVRVWKLEE 126

Query: 96  SSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKK-VTIVSTVLSDP--- 149
              DV LA+  +  +     + LV+ S D     ++ A++      V  V T+   P   
Sbjct: 127 KQTDVNLALAMYRDAASAQYQQLVVCSNDSDIEPVLTAIREDFPTIVLGVVTLRRQPVEG 186

Query: 150 ---SMASDQLRRQADYF-MDLAYLKNEIARDPDEDKK 182
                 S  L  +AD+    +   +   A+ P+  +K
Sbjct: 187 ESDRRVSASLSSRADWTRHYILDSELAAAQLPERVRK 223


>gi|326436665|gb|EGD82235.1| hypothetical protein PTSG_02906 [Salpingoeca sp. ATCC 50818]
          Length = 210

 Score = 46.2 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 62/189 (32%), Gaps = 30/189 (15%)

Query: 1   MFDPR-EKIALFIDGANLYASSKALGFDID-----YRKLLKAFRSRAIVIRAYYYTTVV- 53
           M +P+ EK  L +DG   +A  +     +        +L +    R  +  A  +     
Sbjct: 1   MEEPKGEKALLLVDGTCYFAPLERDRLSVRAAPKWLERLSEKIADRWSLSIARIHLFDAV 60

Query: 54  --------GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVK---------- 95
                       +       LL  +      V  +  K F  NC     +          
Sbjct: 61  MDSSLHDFPSHRKADKSRKSLLRNMQQAHIAVHFRYLKPFRTNCEDVNCRYKSAAIEVPV 120

Query: 96  -SSMDVELAVDAF-EQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMAS 153
            + +DV +   A  +    ++ +V+F  D  +  L+ AL+ K  +V +V+   +      
Sbjct: 121 GAGVDVAITTFALADMPTDVKTVVLFVTDPDYAPLIRALKGKGTRVLVVTDSDAALD--- 177

Query: 154 DQLRRQADY 162
             LR   D 
Sbjct: 178 PALRDALDE 186


>gi|313159517|gb|EFR58880.1| conserved hypothetical protein [Alistipes sp. HGB5]
          Length = 186

 Score = 46.2 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/203 (11%), Positives = 61/203 (30%), Gaps = 40/203 (19%)

Query: 1   MFDPREKIALFIDGANLY------ASSKA--------------LGFDIDYRKLLKAFRSR 40
           M + +E   + ID +N++      ++ K                 + + +  LL      
Sbjct: 1   MNEEKE-CIVIIDNSNVWIEGMKLSALKEGIKSSPIKEKEPCDYSWRLSFGNLLNKVSEG 59

Query: 41  AIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDV 100
             V+      +     +  ++            GFQV          +   +  + ++D 
Sbjct: 60  KKVVSTLLVGSRPPKNDSLWTSAK-------KQGFQVS-------VFDRNTQGKEKAVDA 105

Query: 101 ELAVD---AFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLR 157
           ++                L++ SGD  F  L+        +  I +   + P   + ++ 
Sbjct: 106 QIVAQGTKMICTHPNKGVLILLSGDSDFIPLLEICNELGWESEIWAFKSALP--CAKKMI 163

Query: 158 RQADYFMDLAYLKNEIARDPDED 180
           +       L  + ++I     + 
Sbjct: 164 QYVTRVNYLDSIFSDIGYRQKKK 186


>gi|255555429|ref|XP_002518751.1| conserved hypothetical protein [Ricinus communis]
 gi|223542132|gb|EEF43676.1| conserved hypothetical protein [Ricinus communis]
          Length = 531

 Score = 46.2 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 46/138 (33%), Gaps = 17/138 (12%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           +A+  D  N    S     D+    +  A R   ++  A    +  GD     S    L 
Sbjct: 48  VAILWDIENCPVPSDVRPEDVG-GNIRMALRVHPVIKGAVMMFSAYGDFN---SFPRRLR 103

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGC 124
           +     G +++                K + D  + VD F  +        +++ SGD  
Sbjct: 104 EGCQRTGVKLIDVP----------NGRKDAADKAILVDMFLFALDNPPPSSIMLISGDVD 153

Query: 125 FTTLVAALQRKVKKVTIV 142
           F   +  L ++   V +V
Sbjct: 154 FAPALHILGQRGYTVILV 171


>gi|54027459|ref|YP_121701.1| hypothetical protein nfa54850 [Nocardia farcinica IFM 10152]
 gi|54018967|dbj|BAD60337.1| hypothetical protein [Nocardia farcinica IFM 10152]
          Length = 243

 Score = 46.2 bits (108), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 44/116 (37%), Gaps = 15/116 (12%)

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
            P ++ L   G+ V AK           +      D+   ++   +  GL  +++ S DG
Sbjct: 106 RPWVEALRNVGYAVFAKPKI-------DEDSDVDADMLAHIELRSRGAGLAGIMVASADG 158

Query: 124 C-FTTLVAALQRKVKKVTIVST-VLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
             F   +  L  +   V ++     +  ++ SD L      F+DL  +     R+P
Sbjct: 159 QAFREPLERLAARGVPVQVLGFREHASWAVTSDTL-----EFIDLEDIPGVF-REP 208


>gi|242085250|ref|XP_002443050.1| hypothetical protein SORBIDRAFT_08g006900 [Sorghum bicolor]
 gi|241943743|gb|EES16888.1| hypothetical protein SORBIDRAFT_08g006900 [Sorghum bicolor]
          Length = 457

 Score = 45.8 bits (107), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 52/162 (32%), Gaps = 23/162 (14%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIR-AYYYTTVVGDPEQQFSPLHPL 66
           +A+F D  N    S       D    ++       V+R A    +  GD     +    L
Sbjct: 52  VAIFWDIENCPVPSDV--RPEDVAGNIRMALRMHPVVRGAVTMLSAYGDFN---AFPRRL 106

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDG 123
            +     G ++V                K + D  + VD F  +        +++ SGD 
Sbjct: 107 REGCQRTGVKLVDVP----------NGRKDAADKAILVDMFLFALDNRPPSSIMLISGDV 156

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165
            F   +  L ++     ++S   S     S  L   A  F+ 
Sbjct: 157 DFAPALHILGQRG-YTIVISIPSSV--TVSSAL-SSAGSFVW 194


>gi|118616825|ref|YP_905157.1| hypothetical protein MUL_1097 [Mycobacterium ulcerans Agy99]
 gi|118568935|gb|ABL03686.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
          Length = 245

 Score = 45.8 bits (107), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 42/120 (35%), Gaps = 24/120 (20%)

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG-----LEHLVI 118
            P +D L   GF V AK              K   D ++  D  E  +      L  LV+
Sbjct: 114 RPWVDALRNVGFAVFAKP-------------KIDEDSDVDRDMLEHIDQRYREGLAALVV 160

Query: 119 FSGDGC-FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
            S DG  F   +  + R    V ++         AS  L   A  F+DL  +     R+P
Sbjct: 161 ASADGQAFRQPLEKISRAGTPVQVLGF----REHASWALASDALEFVDLEDIAGVF-REP 215


>gi|226528190|ref|NP_001143204.1| hypothetical protein LOC100275707 [Zea mays]
 gi|223944455|gb|ACN26311.1| unknown [Zea mays]
          Length = 531

 Score = 45.4 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 51/162 (31%), Gaps = 23/162 (14%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIR-AYYYTTVVGDPEQQFSPLHPL 66
           +A+F D  N            D    ++       V+R A    +  GD     +    L
Sbjct: 52  VAIFWDIENCPVPCDV--RPEDVAGNVRMALRMHPVVRGAVTMLSAYGDFN---AFPRRL 106

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDG 123
            +     G ++V                K + D  + VD F  +        +++ SGD 
Sbjct: 107 REGCQRTGVKLVDVP----------NGRKDAADKAILVDMFLFALDNHPPSSIMLISGDV 156

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165
            F   +  L ++     +++   S     S  L   A  F+ 
Sbjct: 157 DFAPALHILGQRG-YTIVIAIPSSV--TVSSAL-SSAGSFVW 194


>gi|195615754|gb|ACG29707.1| hypothetical protein [Zea mays]
          Length = 531

 Score = 45.4 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 51/162 (31%), Gaps = 23/162 (14%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIR-AYYYTTVVGDPEQQFSPLHPL 66
           +A+F D  N            D    ++       V+R A    +  GD     +    L
Sbjct: 52  VAIFWDIENCPVPCDV--RPEDVAGNVRMALRMHPVVRGAVTMLSAYGDFN---AFPRRL 106

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDG 123
            +     G ++V                K + D  + VD F  +        +++ SGD 
Sbjct: 107 REGCQRTGVKLVDVP----------NGRKDAADKAILVDMFLFALDNHPPSSIMLISGDV 156

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165
            F   +  L ++     +++   S     S  L   A  F+ 
Sbjct: 157 DFAPALHILGQRG-YTIVIAIPSSV--TVSSAL-SSAGSFVW 194


>gi|168032729|ref|XP_001768870.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162679782|gb|EDQ66224.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 431

 Score = 45.4 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/156 (14%), Positives = 43/156 (27%), Gaps = 24/156 (15%)

Query: 8   IALFIDGAN--LYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
           +A+  D  N  +     A     + R  L+       V     Y                
Sbjct: 9   VAILWDIENCPVPGEVNAEDVAGNIRIALRDQPHIGAVTMFSAYGDFN-------HFPKK 61

Query: 66  LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDG 123
           + +     G  ++                K + D  + VD F  +       +V+ +GD 
Sbjct: 62  VREGCQRTGVNLIDVP----------NGKKDAADKAILVDMFLFALDNPCSTIVLVTGDV 111

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQ 159
            F   +  L ++   V ++          S  L+  
Sbjct: 112 DFAPALHKLGQRG-YVVVLVIPDGVG--VSPALKGA 144


>gi|224436330|ref|ZP_03657356.1| hypothetical protein HcinC1_00245 [Helicobacter cinaedi CCUG 18818]
          Length = 175

 Score = 45.4 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/90 (12%), Positives = 30/90 (33%), Gaps = 2/90 (2%)

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA--FEQSEGLEHLVIF 119
            L   +    Y   ++     + FT+      V+  +D+ + +D         ++ +++F
Sbjct: 60  KLLHDISVSPYIALRLGELKMQGFTDRGKPNIVQKQVDMLMGLDISHVSYKRLVDKIIVF 119

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDP 149
             D      +   +    +V +V       
Sbjct: 120 CKDTDIVPALKCARTNGIEVIVVDIAEGYK 149


>gi|262204298|ref|YP_003275506.1| hypothetical protein Gbro_4480 [Gordonia bronchialis DSM 43247]
 gi|262087645|gb|ACY23613.1| hypothetical protein Gbro_4480 [Gordonia bronchialis DSM 43247]
          Length = 230

 Score = 45.4 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 48/122 (39%), Gaps = 27/122 (22%)

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE------GLEHLV 117
            P +D L   G+ V AK              K + D ++  D  +  +      GL  +V
Sbjct: 101 RPWVDALRNVGYAVFAKP-------------KLADDSDVDADMLDHIQLRRQTVGLAGVV 147

Query: 118 IFSGDGC-FTTLVAALQRKVKKVTIVST-VLSDPSMASDQLRRQADYFMDLAYLKNEIAR 175
           + S DG  F   ++ +  +   VT++     +  ++ +D L      F+DL  +     R
Sbjct: 148 VASADGQAFREPLSQVAAEGVGVTVIGFREHASWALTADDL-----EFIDLEDIPGVF-R 201

Query: 176 DP 177
           +P
Sbjct: 202 EP 203


>gi|167997905|ref|XP_001751659.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162697640|gb|EDQ83976.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 449

 Score = 45.4 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/139 (15%), Positives = 40/139 (28%), Gaps = 21/139 (15%)

Query: 8   IALFIDGAN--LYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
           +A+  D  N  +     A     + R  L+       V     Y                
Sbjct: 9   VAILWDIENCPVPGEVNAEDVARNIRIALRDQPHIGAVTMFSAYGDFN-------HFPKK 61

Query: 66  LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDG 123
           + +     G  ++                K + D  + VD F  +       +V+ +GD 
Sbjct: 62  VREGCQRTGVNLIDVP----------NGKKDAADKAILVDMFLFALDNPCSTIVLVTGDV 111

Query: 124 CFTTLVAALQRKVKKVTIV 142
            F   +  L ++   V +V
Sbjct: 112 DFAPALHKLGQRGYVVILV 130


>gi|237784873|ref|YP_002905578.1| hypothetical protein ckrop_0248 [Corynebacterium kroppenstedtii DSM
           44385]
 gi|237757785|gb|ACR17035.1| hypothetical protein ckrop_0248 [Corynebacterium kroppenstedtii DSM
           44385]
          Length = 228

 Score = 45.4 bits (106), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 56/188 (29%), Gaps = 39/188 (20%)

Query: 9   ALFI-DGANLYASSKAL-------GFDIDYRKLLKAFRSRAIVIRAYYY-------TTVV 53
           AL I D  N+     ++        +   +  L +   + A  + A          T   
Sbjct: 24  ALLIWDAPNIDMGLGSILGGRPSSAYRPRFDSLGQWLINEADQLSASRDEQIEPEATVFT 83

Query: 54  GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS-EG 112
                    + P +D L   GF V AK              K   D ++  D        
Sbjct: 84  NIMPGSADSIRPWIDALRNLGFAVFAKP-------------KLFDDTDVDPDMLAHINRR 130

Query: 113 LEH-----LVIFSGDG-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
            +      + + S DG  F   +  L  +   V ++         A+  +  +A  F+DL
Sbjct: 131 YDEGVLRSVYVASADGRNFQPRLEELAAEGIDVAVLGF----YEHATWAVMSEAIRFVDL 186

Query: 167 AYLKNEIA 174
             + +   
Sbjct: 187 EDIPDIFT 194


>gi|260578532|ref|ZP_05846443.1| conserved hypothetical protein [Corynebacterium jeikeium ATCC
           43734]
 gi|258603316|gb|EEW16582.1| conserved hypothetical protein [Corynebacterium jeikeium ATCC
           43734]
          Length = 130

 Score = 45.0 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/95 (16%), Positives = 33/95 (34%), Gaps = 12/95 (12%)

Query: 85  FTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIV 142
             E+     ++  +D+ + +D    +E   +  +++ SGD  F       +R      I 
Sbjct: 21  RLEDFYLDIIQKGVDMRIGLDIATMAERGIVTQIIMISGDSDFVPAAKHARRAGIDFII- 79

Query: 143 STVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
                  +  SD L    D       ++  + R P
Sbjct: 80  ---DPLWARISDSLNEHVD------GVRECVRRPP 105


>gi|190572401|ref|YP_001970246.1| hypothetical protein Smlt0329 [Stenotrophomonas maltophilia K279a]
 gi|190010323|emb|CAQ43931.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a]
          Length = 253

 Score = 45.0 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 9/78 (11%), Positives = 24/78 (30%), Gaps = 6/78 (7%)

Query: 86  TENCGRKRVKSSMDVELAVDA--FEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS 143
            ++      +  +D+ + +D         +  +++ +GD  F       +R+     +  
Sbjct: 135 PDDLYPNVRQKGVDMRIGIDISSLALKRQVRQIILMAGDADFVPAAKLARREGVDFVL-- 192

Query: 144 TVLSDPSMASDQLRRQAD 161
                 S     L    D
Sbjct: 193 --DPMWSKTPKGLIEHVD 208


>gi|227549577|ref|ZP_03979626.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM
           44291]
 gi|227078341|gb|EEI16304.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM
           44291]
          Length = 177

 Score = 45.0 bits (105), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/118 (11%), Positives = 37/118 (31%), Gaps = 23/118 (19%)

Query: 74  GFQVVAKVAKEFT-----------ENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFS 120
           G+ +     K+              +   +  +  +D+ + +D    +E   +  +V+ S
Sbjct: 48  GYTLRDGPLKKLCRGAISVEDLQEHDFVLEISQKGVDMRIGLDIASLAERGLVNQIVMIS 107

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
           GD  F       +R      +        +  +D L         +  ++  ++  P 
Sbjct: 108 GDSDFVPAAKHARRSGIDFIL----DPMWAPITDSLAEH------IDGIRQCVSPPPR 155


>gi|325918809|ref|ZP_08180894.1| hypothetical protein XVE_4927 [Xanthomonas vesicatoria ATCC 35937]
 gi|325534983|gb|EGD06894.1| hypothetical protein XVE_4927 [Xanthomonas vesicatoria ATCC 35937]
          Length = 247

 Score = 45.0 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 63/216 (29%), Gaps = 41/216 (18%)

Query: 8   IALFIDGANLYAS-SKALGFD-IDYRKLLKAFRSRAI-----VIRAYYYTTVVGDPEQQF 60
            A++IDG NLY    +   F  +D   L              +   Y+    +G      
Sbjct: 21  TAVYIDGYNLYYGRIRGTAFKWLDVVALFDRLLHDQDPTTDLLHVRYFTAPALGRFATHK 80

Query: 61  SPLHPLLDWLHYNGFQV----VAKVAKEFTENCG--------------------RKRVKS 96
                   +L              + K   +  G                     K  + 
Sbjct: 81  QASETQAAYLRALAHTHPQRFTTTLGKHSWDKGGTLLPEFVSGQPYDRARRVRVWKLEEK 140

Query: 97  SMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVT-IVSTVLSDP---- 149
             DV LA+  +  +     + LV+ S D      + A++     V   V T  + P    
Sbjct: 141 QTDVNLALTMYRDAASARYQQLVVCSNDSDIEPALVAIREDFPSVVLGVVTPRNPPVDGE 200

Query: 150 --SMASDQLRRQADYF-MDLAYLKNEIARDPDEDKK 182
                S  L  +AD+    +   +   A+ P+  +K
Sbjct: 201 SDRRVSVSLSSRADWTRHYILDGELAAAQLPERVRK 236


>gi|313142851|ref|ZP_07805044.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Helicobacter
           cinaedi CCUG 18818]
 gi|313127882|gb|EFR45499.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Helicobacter
           cinaedi CCUG 18818]
          Length = 212

 Score = 45.0 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 11/90 (12%), Positives = 30/90 (33%), Gaps = 2/90 (2%)

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA--FEQSEGLEHLVIF 119
            L   +    Y   ++     + FT+      V+  +D+ + +D         ++ +++F
Sbjct: 97  KLLHDISVSPYIALRLGELKMQGFTDRGKPNIVQKQVDMLMGLDISHVSYKRLVDKIIVF 156

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDP 149
             D      +   +    +V +V       
Sbjct: 157 CKDTDIVPALKCARTNGIEVIVVDIAEGYK 186


>gi|25026904|ref|NP_736958.1| hypothetical protein CE0348 [Corynebacterium efficiens YS-314]
 gi|23492184|dbj|BAC17158.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
          Length = 281

 Score = 45.0 bits (105), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/90 (13%), Positives = 33/90 (36%), Gaps = 12/90 (13%)

Query: 94  VKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151
            +  +D+ + +D    +E   +  +V+ +GD  F       +R+     +        + 
Sbjct: 178 TQKGVDMRIGLDIASLAERQTVNQIVMITGDSDFVPAAKHARREGIDFIL----DPMWAP 233

Query: 152 ASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
            +  L    D       ++  + + P+ +K
Sbjct: 234 IAKSLSEHVD------GIRQCVFKKPENEK 257


>gi|239916658|ref|YP_002956216.1| Protein of unknown function DUF88 [Micrococcus luteus NCTC 2665]
 gi|281414886|ref|ZP_06246628.1| hypothetical protein MlutN2_06748 [Micrococcus luteus NCTC 2665]
 gi|289706971|ref|ZP_06503306.1| conserved hypothetical protein [Micrococcus luteus SK58]
 gi|239837865|gb|ACS29662.1| Protein of unknown function DUF88 [Micrococcus luteus NCTC 2665]
 gi|289556296|gb|EFD49652.1| conserved hypothetical protein [Micrococcus luteus SK58]
          Length = 182

 Score = 44.6 bits (104), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 46/161 (28%), Gaps = 14/161 (8%)

Query: 10  LFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDW 69
           L IDG N+ A+            +L+         R       + D   Q       L  
Sbjct: 8   LLIDGENIDATLG--------TSILQRRPQPDERPRWKRLLGYLEDRWDQPVKGLFFLAI 59

Query: 70  LHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTT-L 128
                   V  +     +    +     +D+ +   A       + +V+ S D  F   L
Sbjct: 60  DGEIPIPFVQALTALGFQPIMLRGEGKVVDIGIQRTAEALLGREDDVVLVSHDADFAPQL 119

Query: 129 VAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD-YFMDLAY 168
                   ++  I+          S +LRR     F DL +
Sbjct: 120 TDLAATPGRRTGIMGF----EEFLSHELRRIPGVEFFDLEH 156


>gi|331682212|ref|ZP_08382834.1| conserved hypothetical protein [Escherichia coli H299]
 gi|331080636|gb|EGI51812.1| conserved hypothetical protein [Escherichia coli H299]
          Length = 285

 Score = 44.6 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/95 (12%), Positives = 35/95 (36%), Gaps = 3/95 (3%)

Query: 86  TENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVS 143
            ++      +  +D++L +D    +    ++ +V+ +GD  F       + K     +  
Sbjct: 151 NDDFYYDIKQKQVDIKLGMDITTLAYEKLVDVIVLVAGDSDFVPAAKHARIKGIDFILDP 210

Query: 144 TVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPD 178
              +     S+        +  ++ L + +  +PD
Sbjct: 211 LRQNVTPSLSEH-IDGVQSYSLISGLADALHVEPD 244


>gi|259506035|ref|ZP_05748937.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
 gi|259166392|gb|EEW50946.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
          Length = 247

 Score = 44.6 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/90 (13%), Positives = 33/90 (36%), Gaps = 12/90 (13%)

Query: 94  VKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151
            +  +D+ + +D    +E   +  +V+ +GD  F       +R+     +        + 
Sbjct: 144 TQKGVDMRIGLDIASLAERQTVNQIVMITGDSDFVPAAKHARREGIDFIL----DPMWAP 199

Query: 152 ASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
            +  L    D       ++  + + P+ +K
Sbjct: 200 IAKSLSEHVD------GIRQCVFKKPENEK 223


>gi|328948943|ref|YP_004366280.1| hypothetical protein Tresu_2114 [Treponema succinifaciens DSM 2489]
 gi|328449267|gb|AEB14983.1| Domain of unknown function DUF88 [Treponema succinifaciens DSM
           2489]
          Length = 311

 Score = 44.6 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 47/121 (38%), Gaps = 13/121 (10%)

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---------GLE 114
                 L   GFQ      +    + GR        V+  +  F  ++           +
Sbjct: 76  QKFYRALDEAGFQRNTFNLRSQESSNGRLPTLKEDAVDTTI-VFNTAKEFYTKSRDERFD 134

Query: 115 HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDP---SMASDQLRRQADYFMDLAYLKN 171
            LV+++GDG  + LV+ L+ +  +V ++      P   + AS  L   AD  + ++ L +
Sbjct: 135 TLVLYAGDGDLSVLVSGLKAEGVRVFVIYYDFKTPVSITRASQNLLETADKAISISSLLD 194

Query: 172 E 172
           E
Sbjct: 195 E 195


>gi|313896562|ref|ZP_07830111.1| hypothetical protein HMPREF9162_1765 [Selenomonas sp. oral taxon
           137 str. F0430]
 gi|312974747|gb|EFR40213.1| hypothetical protein HMPREF9162_1765 [Selenomonas sp. oral taxon
           137 str. F0430]
          Length = 305

 Score = 44.6 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/181 (13%), Positives = 47/181 (25%), Gaps = 29/181 (16%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
             + +A+  D  N                          + +A  Y          +   
Sbjct: 6   SNDTVAILYDIENAPIEMLQY-----------------TIDKAQRYQPCRMIVVSDWEAH 48

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG-LEHLVIFSGD 122
                W     +         F +       K+S+D  L   A    +  +    I + D
Sbjct: 49  PEQKRWDRLMQY-----PDFTFRQISRTFFGKNSLDSALYDSAQILYQEGVRKYFIITTD 103

Query: 123 GCFTTLVAALQRKV-KKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
             F  +  +L  +    +  V T       AS+ LR   + F      +    R   ++ 
Sbjct: 104 SDFVRIAESLNAQDPSYIIGVGTKQ-----ASEDLRNAYNEFFVYPPERKTKGRTAKKNT 158

Query: 182 K 182
           +
Sbjct: 159 E 159


>gi|125572356|gb|EAZ13871.1| hypothetical protein OsJ_03795 [Oryza sativa Japonica Group]
          Length = 454

 Score = 44.6 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/192 (10%), Positives = 55/192 (28%), Gaps = 24/192 (12%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M +  +++A +ID  +L +    +     + +    + ++  +       + V   +   
Sbjct: 233 MPEEGKRLAFYIDIEHLQSVVGIVEHK-RFWEDWDKWGAQGQLGVRIIEDSRVAPTKFSK 291

Query: 61  SPL-------------HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAF 107
           S               +   +        V+               +   +   + VD  
Sbjct: 292 SRDPLIVRKFGDVEPGNYWYNVCEGEAEHVLRPPQGAIRTAPSLMDIVDGIISRMQVD-- 349

Query: 108 EQSEGLEHLVIFSGDGCF-TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
                 + + +   DG     +   L    ++V +    ++   +  D L+ +      L
Sbjct: 350 -----FDSVHVGGNDGNLRRRIEERLNGGGRQVYVAGEGINVVLL--DALKAKYSSVHYL 402

Query: 167 AYLKNEIARDPD 178
              +   ARD  
Sbjct: 403 DAFEELWARDSK 414


>gi|304437583|ref|ZP_07397538.1| conserved hypothetical protein [Selenomonas sp. oral taxon 149 str.
           67H29BP]
 gi|304369396|gb|EFM23066.1| conserved hypothetical protein [Selenomonas sp. oral taxon 149 str.
           67H29BP]
          Length = 227

 Score = 44.6 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/127 (10%), Positives = 39/127 (30%), Gaps = 2/127 (1%)

Query: 17  LYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQ 76
           +Y        D     L     +    ++      +             L + +     +
Sbjct: 65  VYHPLLQRQIDFSQSDLRTWMYAFIEQLKKKRKFAIRLGKLADEQAQFLLREDITRKLCR 124

Query: 77  VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQR 134
              +V     ++      +  +D+++ +D    +  + ++ +V+ SGD  F       +R
Sbjct: 125 SALQVTDLKEQDFLLDVSQKGVDMKIGLDIASLAYKQQVDQIVLISGDSDFVPAAKLARR 184

Query: 135 KVKKVTI 141
           +     +
Sbjct: 185 EGIDFIL 191


>gi|120552973|ref|YP_957324.1| hypothetical protein Maqu_0029 [Marinobacter aquaeolei VT8]
 gi|120322822|gb|ABM17137.1| conserved hypothetical protein [Marinobacter aquaeolei VT8]
          Length = 271

 Score = 44.6 bits (104), Expect = 0.006,   Method: Composition-based stats.
 Identities = 6/50 (12%), Positives = 22/50 (44%), Gaps = 2/50 (4%)

Query: 94  VKSSMDVELAVDA--FEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTI 141
            +  +D+ + +D       + ++ +++ +GD  F       +R+  +  +
Sbjct: 189 HQKGVDMRIGIDIASLTLKQQVDTIILVAGDSDFVPAAKMARREGIEFIL 238


>gi|209916815|ref|YP_002291006.1| hypothetical protein ECSE_P4-0009 [Escherichia coli SE11]
 gi|209915445|dbj|BAG80515.1| conserved hypothetical protein [Escherichia coli SE11]
          Length = 224

 Score = 44.2 bits (103), Expect = 0.007,   Method: Composition-based stats.
 Identities = 20/160 (12%), Positives = 47/160 (29%), Gaps = 33/160 (20%)

Query: 7   KIALFIDGANLYASS-KALGFD-IDYRKLLKA-------------------------FRS 39
           +  +++DG N Y    K  G+  +D  KL +                          F +
Sbjct: 2   RTIVYVDGFNFYHGLVKRSGYKWLDLYKLFEEQLLPIRARESQLIQVKFFTAEIKAKFAT 61

Query: 40  RAIVIR---AYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAK-VAKEFTENCGRKRVK 95
           R  +       Y+  ++    ++   +                     +       K  +
Sbjct: 62  RGELAHQAQQAYHRALLQIYGEKLQIIKGYYSERQECAMTFNEGYPPSKTDRTTVWKLEE 121

Query: 96  SSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQ 133
              DV +A++ +  +     E LV+ + D      +  ++
Sbjct: 122 KQTDVRMALEMYRDAIRGEAEQLVLCTNDSDMIPPIEMIK 161


>gi|299469634|emb|CBN76488.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 353

 Score = 44.2 bits (103), Expect = 0.007,   Method: Composition-based stats.
 Identities = 20/118 (16%), Positives = 38/118 (32%), Gaps = 17/118 (14%)

Query: 3   DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
           + ++++ +F+D  N+    K  G      +LL       +V     +             
Sbjct: 16  ERKQRVGVFVDVENVLGWLKRGGC----TELLAKAGELGVVGIRRAFGDFSNATVASRQ- 70

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
                D L  +GF +V  V          K   +S D+ + +D  E       +   S
Sbjct: 71  -----DELQRHGFDLVHTVH-------PAKGKSNSADISMTIDVMESCRTPGGVFDAS 116


>gi|21282108|ref|NP_645196.1| hypothetical protein MW0379 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|300911084|ref|ZP_07128533.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|21203544|dbj|BAB94244.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MW2]
 gi|300887263|gb|EFK82459.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           TCH70]
          Length = 229

 Score = 44.2 bits (103), Expect = 0.007,   Method: Composition-based stats.
 Identities = 25/218 (11%), Positives = 57/218 (26%), Gaps = 60/218 (27%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAI---------------VIRAYYY 49
            EK+A+ +DG      S  +   +  ++      S                  + R +YY
Sbjct: 1   MEKVAILVDGGYYRKISAKVYGKVTAKERADELYSYCNRHLKETHFKEEIYNKLYRIFYY 60

Query: 50  TTVVGDP----------------EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKR 93
                D                 + +        +        +      E++  C  K 
Sbjct: 61  DCPPIDKIVYHPLLKKNVNFSNTDTKKWTEDFFKEMSKKRKVALRLGELSEYSVECNLKY 120

Query: 94  -------------------------VKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFT 126
                                     +  +D+++ +D    S    ++ +++ +GD  F 
Sbjct: 121 SITKKLLNGSIDLNDLKEKDFSLSLQQKGVDMKIGLDIASLSFKHQVDKIILIAGDSDFV 180

Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQL--RRQADY 162
                 + +     + S      +  S  +  RR  D 
Sbjct: 181 PAAKLARTEGIDFVLDSLGADIRNNLSLHIDGRRTCDE 218


>gi|326436666|gb|EGD82236.1| hypothetical protein PTSG_02907 [Salpingoeca sp. ATCC 50818]
          Length = 341

 Score = 44.2 bits (103), Expect = 0.007,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 49/134 (36%), Gaps = 12/134 (8%)

Query: 45  RAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGR----KRVKSSMDV 100
           R  ++  ++   + +      +   + +     +    K    +       + V++ +DV
Sbjct: 73  RRAFHKALLEQMQTEAGKDILIKTHIQHLKPMAIRCPEKTCVHSQPGKEVVRPVQAGVDV 132

Query: 101 ELAV-DAFEQSEGLEHLVIFSGDGCFTTLVAALQR--KVKKVTIVSTVLSDPSMASDQLR 157
           ++A          + H+  F GDG F  ++ AL+R    K V +V    +     S  LR
Sbjct: 133 DIAAFLLTSLPPDVTHVYCFIGDGDFVPVIEALRRPQFGKTVKLVLFSET---ALSIGLR 189

Query: 158 R--QADYFMDLAYL 169
                   + L+ L
Sbjct: 190 SVMAKSDIIFLSKL 203


>gi|320529053|ref|ZP_08030145.1| conserved domain protein [Selenomonas artemidis F0399]
 gi|320138683|gb|EFW30573.1| conserved domain protein [Selenomonas artemidis F0399]
          Length = 305

 Score = 44.2 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 24/181 (13%), Positives = 47/181 (25%), Gaps = 29/181 (16%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
             + +A+  D  N                          + +A  Y          +   
Sbjct: 6   SNDTVAILYDIENAPIEMLQY-----------------TIDKAQRYQPCRMIVVSDWEAH 48

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG-LEHLVIFSGD 122
                W     +         F +       K+S+D  L   A    +  +    I + D
Sbjct: 49  PEQKRWDRLMQY-----PDFTFRQISRTFFGKNSLDSALYDSAQILYQEGVRKYFIITTD 103

Query: 123 GCFTTLVAALQRKV-KKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDPDEDK 181
             F  +  +L  +    +  V T       AS+ LR   + F      +    R   ++ 
Sbjct: 104 SDFVRIAESLNAQDPSYIIGVGTKQ-----ASEDLRNAYNEFFVYPPERKIKGRTTKKNT 158

Query: 182 K 182
           +
Sbjct: 159 E 159


>gi|125528075|gb|EAY76189.1| hypothetical protein OsI_04122 [Oryza sativa Indica Group]
          Length = 454

 Score = 44.2 bits (103), Expect = 0.008,   Method: Composition-based stats.
 Identities = 21/192 (10%), Positives = 55/192 (28%), Gaps = 24/192 (12%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M +  +++A +ID  +L  S   +     + +    + ++  +       + V   +   
Sbjct: 233 MPEEGKRLAFYIDIEHLQ-SVFGIVEHKRFWEDWDKWGAQGQLGVRIIEDSRVAPTKFSK 291

Query: 61  SPL-------------HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAF 107
           S               +   +        V+               +   +   + VD  
Sbjct: 292 SRDPLIVRKFGDVEPGNYWYNVCEGEAEHVLRPPQGAIRTAPSLMDIVDGIISRMQVD-- 349

Query: 108 EQSEGLEHLVIFSGDGCF-TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
                 + + +   DG     +   L    ++V +    ++   +  D L+ +      L
Sbjct: 350 -----FDSVHVGGNDGNLRRRIEERLNGGGRQVYVAGEGINVVLL--DALKAKYSSVHYL 402

Query: 167 AYLKNEIARDPD 178
              +   ARD  
Sbjct: 403 DAFEELWARDSK 414


>gi|148927765|ref|ZP_01811198.1| hypothetical protein TM7_0453 [candidate division TM7 genomosp.
           GTL1]
 gi|147886893|gb|EDK72430.1| hypothetical protein TM7_0453 [candidate division TM7 genomosp.
           GTL1]
          Length = 199

 Score = 43.9 bits (102), Expect = 0.009,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 46/188 (24%), Gaps = 36/188 (19%)

Query: 13  DGANLYA------------SSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           DG N               + K + F  D+            +   YY T +    ++  
Sbjct: 4   DGENFRHQIAHILLEHEKITEKNIFFKFDFYGFCSEIIGEEHLKITYYTTKIKQPRQKIP 63

Query: 61  SPL-----------HPLLDWLHYNGFQVV-AKVAKEFTENCGRKRVK-------SSMDVE 101
             L              + WL     +VV A   +    N      K         +DV 
Sbjct: 64  KALEKNIASISAANRRWVAWLTNQKIKVVKAGHLRVRESNACIHCGKRTLVLQEKGVDVR 123

Query: 102 LAVDAFEQSEGLEH-LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160
           +A D    +   +  +V+ S D      +         +  +          +      A
Sbjct: 124 VATDLVHFARQKKGPIVLGSSDSDIVPALEVAAGLGAPIIYLCYASQLNRSVA----AAA 179

Query: 161 DYFMDLAY 168
              +    
Sbjct: 180 SKVITFDD 187


>gi|120406890|ref|YP_956719.1| hypothetical protein Mvan_5954 [Mycobacterium vanbaalenii PYR-1]
 gi|119959708|gb|ABM16713.1| hypothetical protein Mvan_5954 [Mycobacterium vanbaalenii PYR-1]
          Length = 222

 Score = 43.9 bits (102), Expect = 0.009,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 28/76 (36%), Gaps = 8/76 (10%)

Query: 99  DVELA--VDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVT-IVSTVLSDPSMASDQ 155
           D  L   VD    +     +VI SGD  F  L   LQ     V  ++         +S  
Sbjct: 83  DTALIDSVDVGWVAANFGQVVIASGDHIFAPLAHGLQSNGLHVIQVIG-----RGASSAT 137

Query: 156 LRRQADYFMDLAYLKN 171
           L R  +    L ++++
Sbjct: 138 LYRACNEQKYLTHIRD 153


>gi|58583681|ref|YP_202697.1| hypothetical protein XOO4058 [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|58428275|gb|AAW77312.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 84

 Score = 43.9 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 14/92 (15%), Positives = 33/92 (35%), Gaps = 13/92 (14%)

Query: 93  RVKSSMDVELAVDA--FEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS 150
             +  +D+ + +D         ++ +V+F+GD  F       +R+     +        S
Sbjct: 1   MRQKGVDMRIGIDISSLALKHQVDQIVLFAGDADFVPAAKLARREGIDFVL----DPMWS 56

Query: 151 MASDQLRRQADYFMDLAYLKNEIARD-PDEDK 181
             +D L         +  +++   R  P + K
Sbjct: 57  SVADGLLEH------IDGMRSVCPRPIPRKPK 82


>gi|269796423|ref|YP_003315878.1| hypothetical protein Sked_31470 [Sanguibacter keddieii DSM 10542]
 gi|269098608|gb|ACZ23044.1| hypothetical protein Sked_31470 [Sanguibacter keddieii DSM 10542]
          Length = 192

 Score = 43.9 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 25/186 (13%), Positives = 60/186 (32%), Gaps = 38/186 (20%)

Query: 1   MFDPREKIA----LFIDGANLYASSK--------ALGFDIDYRKLLKAFRS-RAIVIRAY 47
           M    ++ A    L +DG N+ A+          A      + ++ +  ++     +   
Sbjct: 1   MSGSEQRTARPTYLLVDGENIDATLGMNVLGHRPAPEERPRWDRISEFAQTLWGQPVTPL 60

Query: 48  YYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAF 107
           ++               P +  L   G++ +                +  +D+ +     
Sbjct: 61  FFLNASSGQMP-----MPFVQALLAMGYRPIPL---------AGASHEKVVDIGIQR-TL 105

Query: 108 EQSEGLE-HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS----MASDQLRRQADY 162
           E  + ++  +++ S DG F   V AL    ++V ++            +++  L      
Sbjct: 106 EAIKDVDGDVLLASHDGDFLPQVEALLDGERRVGLMCFREFVNGRLNELSARGL-----E 160

Query: 163 FMDLAY 168
           F DL  
Sbjct: 161 FFDLEE 166


>gi|213493840|gb|ACJ48051.1| 6-hydroxy-3-succinoylpyridine hydroxylase [Pseudomonas putida]
          Length = 204

 Score = 43.9 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 23/138 (16%), Positives = 49/138 (35%), Gaps = 9/138 (6%)

Query: 32  KLLKAFRSRAIVI--RAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV----AKVAKEF 85
           K++++       +  +A Y+T +    + +   +             V      K  +E 
Sbjct: 53  KIIESVARAGDSVSSQALYHTALRKLHDGRIELIEGYYAVNKMKVKIVDPENPDKAPREC 112

Query: 86  TENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRK-VKKVTIV 142
            E    K  +   DV LA+ A+  S    ++H VI + D      +  ++     ++ +V
Sbjct: 113 REIQAWKVEEKQSDVNLALQAYHDSITGQVDHAVIVTNDTDIAPALQMIRAHTDVRIGVV 172

Query: 143 STVLSDPSMASDQLRRQA 160
                    A+  L + A
Sbjct: 173 VPTSGQNRSANTDLIKFA 190


>gi|325001258|ref|ZP_08122370.1| hypothetical protein PseP1_20962 [Pseudonocardia sp. P1]
          Length = 203

 Score = 43.9 bits (102), Expect = 0.010,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 59/185 (31%), Gaps = 26/185 (14%)

Query: 4   PREKIALFIDGANLYASSK---------ALGFDID-YRKLLKAFRSRAIVIRAYYYTTVV 53
           P E++ L  D  N+  S           A     D   + L           A  +T V 
Sbjct: 5   PLERVLLVWDAPNMDMSLGSLLGARPTSAYRPRFDAVGRWLLDLAGTEAEAEACVFTNVA 64

Query: 54  GDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGL 113
               +    + P ++ L   GF V AK       +     +         +D       L
Sbjct: 65  PGSIE---IVRPWVEALRNVGFAVFAKPKTSDDSDVDDDMLA-------HIDLRSGEGRL 114

Query: 114 EHLVIFSGDG-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
            H+V+ SGDG  F   +  L      VT++          + ++      F+DL  +   
Sbjct: 115 RHVVVASGDGRAFKDPLEKLVEGGTDVTVIGFREYAGFAQASEVIS----FLDLEDMDGV 170

Query: 173 IARDP 177
             R+P
Sbjct: 171 F-REP 174


>gi|298693751|gb|ADI96973.1| hypothetical protein SAOV_0437 [Staphylococcus aureus subsp. aureus
           ED133]
          Length = 229

 Score = 43.9 bits (102), Expect = 0.011,   Method: Composition-based stats.
 Identities = 24/218 (11%), Positives = 56/218 (25%), Gaps = 60/218 (27%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAI---------------VIRAYYY 49
            EK+A+ +DG      S  +   +  ++      S                  + R +YY
Sbjct: 1   MEKVAILVDGGYYRKISAKVYGKVTAKERADELYSYCNRQLKETHFKEEIYNKLYRIFYY 60

Query: 50  TTVVGDP----------------EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKR 93
                D                 + +        +        +      E++     K 
Sbjct: 61  DCPPIDKIVYHPLLKKNVNFSNTDTKKWTEDFFKEMSKKRKVALRLGELSEYSVEYNLKY 120

Query: 94  -------------------------VKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFT 126
                                     +  +D+++ +D    S    ++ +++ +GD  F 
Sbjct: 121 SITKKLLNGSIDLNDLKEKDFSLSLQQKGVDMKIGLDIASLSFKHQVDKIILIAGDSDFV 180

Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQL--RRQADY 162
                 + +     + S      +  S  +  RR  D 
Sbjct: 181 PAAKLARTEGIDFVLDSLGADIRNNLSLHIDGRRTCDE 218


>gi|254420143|ref|ZP_05033867.1| hypothetical protein BBAL3_2453 [Brevundimonas sp. BAL3]
 gi|196186320|gb|EDX81296.1| hypothetical protein BBAL3_2453 [Brevundimonas sp. BAL3]
          Length = 253

 Score = 43.9 bits (102), Expect = 0.011,   Method: Composition-based stats.
 Identities = 17/143 (11%), Positives = 40/143 (27%), Gaps = 13/143 (9%)

Query: 5   REKIALFIDGANLYASSKALGFD----IDYRKLLKAFRSRAI-VIRAYYYTTVVGDPEQQ 59
           + +  L++DG NL+ +           +D R L +        +    + +        +
Sbjct: 20  KRRAVLYVDGYNLFHALLDQKRREWLWLDLRALGRGLIDPMERLTGVVWVSAHKPQARAR 79

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA--------FEQSE 111
                     L     + +        E+C       S   E   D            + 
Sbjct: 80  MEAQFRYETALRARRVRCLMGHFVVHGEHCRACGHGWSSATEKQSDVNLALAVADDVAAN 139

Query: 112 GLEHLVIFSGDGCFTTLVAALQR 134
            ++ + + + DG     V  ++ 
Sbjct: 140 RVDSVYLLTTDGDHAATVRFVRE 162


>gi|49485284|ref|YP_042505.1| hypothetical protein SAS0381 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|297209084|ref|ZP_06925483.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           ATCC 51811]
 gi|49243727|emb|CAG42152.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|296886017|gb|EFH24951.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           ATCC 51811]
          Length = 229

 Score = 43.5 bits (101), Expect = 0.012,   Method: Composition-based stats.
 Identities = 24/218 (11%), Positives = 56/218 (25%), Gaps = 60/218 (27%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAI---------------VIRAYYY 49
            EK+A+ +DG      S  +   +  ++      S                  + R +YY
Sbjct: 1   MEKVAILVDGGYYRKISAKVYGKVTAKERADELYSYCNRHLKETHFKEEIYNKLYRIFYY 60

Query: 50  TTVVGDP----------------EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKR 93
                D                 + +        +        +      E++     K 
Sbjct: 61  DCPPIDKIVYHPLLKKNVNFSNTDTKKWTEDFFKEMSKKRKVALRLGELSEYSVEYNLKY 120

Query: 94  -------------------------VKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFT 126
                                     +  +D+++ +D    S    ++ +++ +GD  F 
Sbjct: 121 SITKKLLNGSIDLNDLKEKDFSLSLQQKGVDMKIGLDIASLSFKHQVDKIILIAGDSDFV 180

Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMASDQL--RRQADY 162
                 + +     + S      +  S  +  RR  D 
Sbjct: 181 PAAKLARTEGIDFVLDSLGADIRNNLSLHIDGRRTCDE 218


>gi|242310286|ref|ZP_04809441.1| helicase [Helicobacter pullorum MIT 98-5489]
 gi|239522684|gb|EEQ62550.1| helicase [Helicobacter pullorum MIT 98-5489]
          Length = 242

 Score = 43.5 bits (101), Expect = 0.012,   Method: Composition-based stats.
 Identities = 13/111 (11%), Positives = 34/111 (30%), Gaps = 6/111 (5%)

Query: 32  KLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTEN-CG 90
           K           +R   Y  V      + S      ++  +           E +     
Sbjct: 100 KFRSELLKH---LRRQPYFAVRLGEIDENSFQWKFKNYDKFKKILRKEIDVSELSNEDFV 156

Query: 91  RKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKV 139
               +  +D+++ +D    +    +E +++ + D  F   V   +++   V
Sbjct: 157 LDIKQKGVDMKIGLDIATLANKHQVEKIILITADSDFVPAVKHARKEGLIV 207


>gi|222823150|ref|YP_002574723.1| hypothetical protein Cla_0106 [Campylobacter lari RM2100]
 gi|222538371|gb|ACM63472.1| conserved hypothetical protein [Campylobacter lari RM2100]
          Length = 240

 Score = 43.5 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 16/110 (14%), Positives = 40/110 (36%), Gaps = 16/110 (14%)

Query: 46  AYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFT--------------ENCGR 91
            + + T + D  +Q       L  +  N FQ   K  K+F               ++   
Sbjct: 98  TFKFRTSLLDCLRQQPYFAVRLGEIDENSFQWKIKDYKKFQQLLQKEIKIDSLTEDDFVL 157

Query: 92  KRVKSSMDVELAVDA--FEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKV 139
              +  +D+++ +D       + +E +++ + D  F   +   +++   V
Sbjct: 158 DIRQKGVDMKIGLDIATLSIKKQIEKIILITADSDFIPAIKHARKEGVIV 207


>gi|152965451|ref|YP_001361235.1| hypothetical protein Krad_1483 [Kineococcus radiotolerans SRS30216]
 gi|151359968|gb|ABS02971.1| hypothetical protein Krad_1483 [Kineococcus radiotolerans SRS30216]
          Length = 259

 Score = 43.5 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 39/120 (32%), Gaps = 12/120 (10%)

Query: 56  PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEH 115
                  L   ++ L   G+ V A+      ++     ++        + +   S  L  
Sbjct: 71  HPTSAVSLRGWIEALRSFGYAVFARPKVHPEDDVDDAMLQ-------HIASRRASHRLRR 123

Query: 116 LVIFSGDG-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIA 174
           +V+ SGDG  F   +  L R   +V ++S            L      F+DL  +     
Sbjct: 124 VVVASGDGRNFLAPLEELHRAGVRVVVLSFAEVAGYAQESPLI----EFVDLEDVPGAFQ 179


>gi|295394693|ref|ZP_06804911.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC
           49030]
 gi|294972463|gb|EFG48320.1| conserved hypothetical protein [Brevibacterium mcbrellneri ATCC
           49030]
          Length = 257

 Score = 43.5 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 35/105 (33%), Gaps = 5/105 (4%)

Query: 40  RAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYN-GFQVVAKVAKEFTENCGRKRVKSSM 98
              ++R   +    G+  +  S      D L      ++     K   E+      +  +
Sbjct: 105 HQQLVRKRKFAFRRGEELESQSHFSLKYDKLKKLCSGKISVSDLK--PEDFDLDITQKGV 162

Query: 99  DVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTI 141
           D+ + +D    +E   +  +V+ SGD  F       +R      +
Sbjct: 163 DMRIGLDIASLAERRLVNQIVMISGDSDFVPAAKHARRSGIDFIL 207


>gi|296138104|ref|YP_003645347.1| hypothetical protein Tpau_0365 [Tsukamurella paurometabola DSM
           20162]
 gi|296026238|gb|ADG77008.1| conserved hypothetical protein [Tsukamurella paurometabola DSM
           20162]
          Length = 221

 Score = 43.5 bits (101), Expect = 0.014,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 62/195 (31%), Gaps = 45/195 (23%)

Query: 7   KIALFIDGANLYASSKAL-----------------GFDIDYRKLLKAFRSRAIVIRAYYY 49
           ++ L  D  NL     ++                  + ++Y   L++     +   A  +
Sbjct: 18  RVLLVWDAPNLDMGLGSILGGRPTAAHRPRFDALGRWLLEYTAALESDTDSRLEPEATVF 77

Query: 50  TTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ 109
           T +          + P ++ L   G+ V AK              K   D ++  D  + 
Sbjct: 78  TNIAPGTAD---VVRPWVEALRNVGYAVFAKP-------------KVDEDSDVDADMLDH 121

Query: 110 S------EGLEHLVIFSGDGC-FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162
                   GL  L++ S DG  F   +  +      V ++         A+  L+     
Sbjct: 122 IEVRRYRPGLGGLLVASADGQAFREPLEEIAATGVPVKVLGF----REHAAWALQSPTLE 177

Query: 163 FMDLAYLKNEIARDP 177
           F+DL  +     R+P
Sbjct: 178 FVDLEDIAGVF-REP 191


>gi|209693661|ref|YP_002261589.1| hypothetical protein VSAL_I0028 [Aliivibrio salmonicida LFI1238]
 gi|208007612|emb|CAQ77713.1| hypothetical protein VSAL_I0028 [Aliivibrio salmonicida LFI1238]
          Length = 317

 Score = 43.5 bits (101), Expect = 0.015,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 48/174 (27%), Gaps = 42/174 (24%)

Query: 7   KIALFIDGANLYASSKA--LGFDIDYRKLLKA-FRSRAIVIRAYYY-------------- 49
           +  ++IDG N Y           +D  KL +     R+ V  A  +              
Sbjct: 2   RTRIYIDGYNFYYGCLKGTPYKWLDLVKLFEEHIIPRSDVYNATLHDNVGIKYFTAEITN 61

Query: 50  --TTVVGDPEQQFSPLHPLLDWLHYNGFQV--------------------VAKVAKEFTE 87
                      Q S  H L          +                    + K  K+   
Sbjct: 62  KAAADPNSVNDQRSYHHALYLHSENLLKTIKGSYAVDKVEYPKVEYYEAGIEKEPKDCAR 121

Query: 88  NCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKK 138
               K  +   DV +A++A   +     LE ++  + D      +  ++   +K
Sbjct: 122 VKVWKLEEKQSDVNIAIEAVYDAVMDHTLEQIIFVTNDTDIVPALEKIREHNQK 175


>gi|300933129|ref|ZP_07148385.1| hypothetical protein CresD4_03618 [Corynebacterium resistens DSM
           45100]
          Length = 240

 Score = 43.1 bits (100), Expect = 0.015,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 41/120 (34%), Gaps = 25/120 (20%)

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE------GLEHLV 117
            P ++ L   GF V AK              K + D ++  D  +          L+ +V
Sbjct: 112 RPWVEALRNVGFAVFAKP-------------KLTEDSDVDPDMLDHIRLRHQQGTLDGVV 158

Query: 118 IFSGDG-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
           + S DG  F   +  L  +   VT++          +  L  +A  F+DL  +       
Sbjct: 159 VASADGQNFQDFLEELAEE-IPVTVLGF----QEHTTWALVSEAIEFIDLEDIPGVFREP 213


>gi|77458643|ref|YP_348149.1| hypothetical protein Pfl01_2418 [Pseudomonas fluorescens Pf0-1]
 gi|77382646|gb|ABA74159.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
          Length = 247

 Score = 43.1 bits (100), Expect = 0.016,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 25/70 (35%), Gaps = 6/70 (8%)

Query: 94  VKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151
            +  +D+ + VD    S  + ++ +V+ +GD  F       +R+     +          
Sbjct: 156 RQKGVDMRIGVDVASLSFKQQVDQIVLIAGDADFVPAAKMARREGVDFIL----DPMWQS 211

Query: 152 ASDQLRRQAD 161
             D L    D
Sbjct: 212 IPDSLMEHID 221


>gi|302801828|ref|XP_002982670.1| hypothetical protein SELMODRAFT_58009 [Selaginella moellendorffii]
 gi|300149769|gb|EFJ16423.1| hypothetical protein SELMODRAFT_58009 [Selaginella moellendorffii]
          Length = 153

 Score = 43.1 bits (100), Expect = 0.018,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 53/165 (32%), Gaps = 26/165 (15%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDI--DYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58
           M     K +++ D  N    +    F I  +   +L AF     +  + Y          
Sbjct: 1   MEASVAKTSVWWDIENCRPPADVNPFHIARNISNVLHAFNFFGPLTISAY--------GD 52

Query: 59  QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA---FEQSEGLEH 115
            +     + + L   G  +                 K + D  + ++       +    +
Sbjct: 53  TYQLTRHVQNALTSTGISLNHIP----------SGRKEASDKAILMNMAFWTSDNPPPAN 102

Query: 116 LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160
           +V+ SGD  F+ L+  LQ K   V +V     +    S+ L   A
Sbjct: 103 VVLISGDQDFSPLLHRLQMKRFNVLLV---RPEGVHVSESLLNSA 144


>gi|260886456|ref|ZP_05897719.1| conserved hypothetical protein [Selenomonas sputigena ATCC 35185]
 gi|260863838|gb|EEX78338.1| conserved hypothetical protein [Selenomonas sputigena ATCC 35185]
          Length = 241

 Score = 43.1 bits (100), Expect = 0.018,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 49/164 (29%), Gaps = 32/164 (19%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
             E +A+  D  N          D    K  K F  R IV+               +   
Sbjct: 6   STETVAVLYDIENAPFEML----DFTLGKARKFFPCRMIVV-------------SDWEKH 48

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSG 121
                W       ++++    F +   +   K+S+D  L  D  +      +   +I + 
Sbjct: 49  PEQKRWNR-----LMSRKGLTFRQIDRKVDGKNSLDYAL-FDMAKILRDEGVRRFLIVTT 102

Query: 122 DGCFTTLVAALQRKV--KKVTIVSTVLSDPSMASDQLRRQADYF 163
           D  F  +   L+       +  V T       AS  LR   D F
Sbjct: 103 DSDFVAIAQMLRESDTPCHIIGVGTEQ-----ASQSLRDAYDEF 141


>gi|299470313|emb|CBN78363.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 588

 Score = 43.1 bits (100), Expect = 0.019,   Method: Composition-based stats.
 Identities = 18/140 (12%), Positives = 38/140 (27%), Gaps = 17/140 (12%)

Query: 32  KLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGR 91
           +LL++      +             + Q             +   +  +     +   G 
Sbjct: 298 ELLESIDILDELGTRDVGVIYADWNKTQDWRSELFGRSKARDFKLLQREPLPPGSNPLG- 356

Query: 92  KRVKSSMDVELAVDAFEQSEGLE----HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLS 147
                  D  +  +    +   E       + S DG  + L A L+ + + V  V     
Sbjct: 357 -------DDTMTAEVLALARSEELNKYEFCLLSADGSLSELAAKLRGEGRAVRGVG---- 405

Query: 148 DPSMASDQLRRQADYFMDLA 167
               A ++     D FM + 
Sbjct: 406 -RRQAPEEFLDNCDTFMYID 424


>gi|330838781|ref|YP_004413361.1| Domain of unknown function DUF88 [Selenomonas sputigena ATCC 35185]
 gi|329746545|gb|AEB99901.1| Domain of unknown function DUF88 [Selenomonas sputigena ATCC 35185]
          Length = 242

 Score = 43.1 bits (100), Expect = 0.019,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 49/164 (29%), Gaps = 32/164 (19%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
             E +A+  D  N          D    K  K F  R IV+               +   
Sbjct: 7   STETVAVLYDIENAPFEML----DFTLGKARKFFPCRMIVV-------------SDWEKH 49

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSG 121
                W       ++++    F +   +   K+S+D  L  D  +      +   +I + 
Sbjct: 50  PEQKRWNR-----LMSRKGLTFRQIDRKVDGKNSLDYAL-FDMAKILRDEGVRRFLIVTT 103

Query: 122 DGCFTTLVAALQRKV--KKVTIVSTVLSDPSMASDQLRRQADYF 163
           D  F  +   L+       +  V T       AS  LR   D F
Sbjct: 104 DSDFVAIAQMLRESDTPCHIIGVGTEQ-----ASQSLRDAYDEF 142


>gi|332974390|gb|EGK11317.1| hypothetical protein HMPREF0476_0432 [Kingella kingae ATCC 23330]
          Length = 162

 Score = 43.1 bits (100), Expect = 0.019,   Method: Composition-based stats.
 Identities = 8/81 (9%), Positives = 29/81 (35%), Gaps = 9/81 (11%)

Query: 92  KRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSD 148
              +  +D+++ +D    +         V+ + D  F   +   + +  ++ +     + 
Sbjct: 84  NITQKGVDMKIGLDMATLALKKASGRDFVLVTADSDFVPAIKLARMEGVQIFLAHLGHTV 143

Query: 149 PSMASDQLRRQADYFMDLAYL 169
                 +L+  +D  + L  +
Sbjct: 144 KP----ELKEHSD--VLLDNI 158


>gi|300859364|ref|YP_003784347.1| hypothetical protein cpfrc_01947 [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300686818|gb|ADK29740.1| hypothetical protein cpfrc_01947 [Corynebacterium
           pseudotuberculosis FRC41]
 gi|302207047|gb|ADL11389.1| Conserved hypothetical protein [Corynebacterium pseudotuberculosis
           C231]
 gi|302331607|gb|ADL21801.1| Conserved hypothetical protein [Corynebacterium pseudotuberculosis
           1002]
 gi|308277300|gb|ADO27199.1| Conserved hypothetical protein [Corynebacterium pseudotuberculosis
           I19]
          Length = 219

 Score = 42.7 bits (99), Expect = 0.020,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 44/117 (37%), Gaps = 13/117 (11%)

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
            + P ++ L   GF V AK           +      D+   +    Q+  L+ LV+ S 
Sbjct: 86  NVRPWVEALRNIGFAVFAKP-------KLSEETDVDPDMLAHIRLRHQAGKLKGLVVASA 138

Query: 122 DG-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
           DG  F   +  L  +   VT++          +D+    A  F+DL  +     RDP
Sbjct: 139 DGQNFKDTLDELAAEGVAVTVLGFHEHASWAVADE----ALTFVDLEEVPGVF-RDP 190


>gi|218200714|gb|EEC83141.1| hypothetical protein OsI_28326 [Oryza sativa Indica Group]
          Length = 523

 Score = 42.7 bits (99), Expect = 0.022,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 53/161 (32%), Gaps = 21/161 (13%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           +A+F D  N    S     D+    +  A R   +V  A    +  GD     +    L 
Sbjct: 45  VAIFWDIENCPVPSDVRPEDV-AGNVRMALRLHPVVKGAVTMLSAYGDFN---AFPRRLR 100

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGC 124
           +     G ++V                K + D  + VD F  +        +++ SGD  
Sbjct: 101 EGCQRTGVKLVDVP----------NGRKDAADKAILVDMFLFALDNRPPSSIMLISGDVD 150

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165
           F   +  L ++     +++   S     S  L   A  F+ 
Sbjct: 151 FAPALHILGQRG-YTIVLAIPSSV--TVSSAL-SSAGTFVW 187


>gi|170691868|ref|ZP_02883032.1| conserved hypothetical protein [Burkholderia graminis C4D1M]
 gi|170143152|gb|EDT11316.1| conserved hypothetical protein [Burkholderia graminis C4D1M]
          Length = 242

 Score = 42.7 bits (99), Expect = 0.022,   Method: Composition-based stats.
 Identities = 8/54 (14%), Positives = 23/54 (42%), Gaps = 2/54 (3%)

Query: 85  FTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKV 136
             ++      +  +D+ + VD    +  + ++ +V+ +GD  F       +R+ 
Sbjct: 152 REDDVTIDIRQKGVDMRIGVDVSSLAFKKQVDQIVLMAGDADFVPAAKQARREG 205


>gi|317181056|dbj|BAJ58842.1| hypothetical protein HPF32_1260 [Helicobacter pylori F32]
          Length = 213

 Score = 42.7 bits (99), Expect = 0.023,   Method: Composition-based stats.
 Identities = 20/177 (11%), Positives = 53/177 (29%), Gaps = 46/177 (25%)

Query: 6   EKIALFIDGANLYASSKAL--GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
           +K+A+ +DG       K+      +D  + L   ++   + R ++Y     D +  +   
Sbjct: 3   KKVAILVDGDFFIRCYKSHLKKQSVDKYEDLNPKKNDEELYRIFFYDCKPLDKKVHYPHT 62

Query: 64  HPLLDWLHYNGFQVVAKVAKEF-------------------------------------- 85
              LD    + ++    + K                                        
Sbjct: 63  QRALDLSKSSTYKERTALHKHLISKPCLALRLGYLDANNARWVIHNKEKEKKLFKGEIYI 122

Query: 86  ----TENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136
                ++      +  +D+++ +D    +    ++ +V+ SGD  F       + + 
Sbjct: 123 ADFTNDDFIYHAKQKGVDIKIGLDIATLALKKLVQKIVLISGDSDFVPAAKLARVEG 179


>gi|255659675|ref|ZP_05405084.1| histone H1-II [Mitsuokella multacida DSM 20544]
 gi|260848240|gb|EEX68247.1| histone H1-II [Mitsuokella multacida DSM 20544]
          Length = 336

 Score = 42.7 bits (99), Expect = 0.023,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 46/159 (28%), Gaps = 29/159 (18%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           + +  D  N                       R    R    +     PEQ+        
Sbjct: 10  VGILYDIENAPFEMLNYTLGK---------ARRFQPCRTIVISDWEERPEQKRWE----- 55

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA-FEQSEGLEHLVIFSGDGCFT 126
                   +++ +    F +       K+S+D  L   A     EG+    I + D  F 
Sbjct: 56  --------KLLRRPGFTFRQISRTFLGKNSLDSALYDSAKLLYEEGVRRYFIITTDSDFV 107

Query: 127 TLVAALQRKVK-KVTIVSTVLSDPSMASDQLRRQADYFM 164
            +   L  K K  +  V T       AS+ LR   D F+
Sbjct: 108 RIAQMLNSKEKSYIIGVGTKQ-----ASETLRNAYDEFI 141


>gi|241664407|ref|YP_002982767.1| hypothetical protein Rpic12D_2825 [Ralstonia pickettii 12D]
 gi|240866434|gb|ACS64095.1| conserved hypothetical protein [Ralstonia pickettii 12D]
          Length = 244

 Score = 42.7 bits (99), Expect = 0.024,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 27/72 (37%), Gaps = 5/72 (6%)

Query: 94  VKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151
            +  +D+ + VD    +  + ++ +V+ +GD  F       +R+     +       P  
Sbjct: 159 RQKGVDMRIGVDVSSLAFKQQVDQIVLIAGDADFVPAAKQARREGIDFILDPMWQGIPPN 218

Query: 152 AS---DQLRRQA 160
            +   D LR   
Sbjct: 219 LNEHIDGLRSTC 230


>gi|222640135|gb|EEE68267.1| hypothetical protein OsJ_26494 [Oryza sativa Japonica Group]
          Length = 523

 Score = 42.7 bits (99), Expect = 0.024,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 53/161 (32%), Gaps = 21/161 (13%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           +A+F D  N    S     D+    +  A R   +V  A    +  GD     +    L 
Sbjct: 45  VAIFWDIENCPVPSDVRPEDV-AGNVRMALRLHPVVKGAVTMLSAYGDFN---AFPRRLR 100

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGC 124
           +     G ++V                K + D  + VD F  +        +++ SGD  
Sbjct: 101 EGCQRTGVKLVDVP----------NGRKDAADKAILVDMFLFALDNRPPSSIMLISGDVD 150

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165
           F   +  L ++     +++   S     S  L   A  F+ 
Sbjct: 151 FAPALHILGQRG-YTIVLAIPSSV--TVSSAL-SSAGSFVW 187


>gi|115475405|ref|NP_001061299.1| Os08g0230500 [Oryza sativa Japonica Group]
 gi|38175445|dbj|BAD01251.1| unknown protein [Oryza sativa Japonica Group]
 gi|113623268|dbj|BAF23213.1| Os08g0230500 [Oryza sativa Japonica Group]
          Length = 530

 Score = 42.7 bits (99), Expect = 0.024,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 53/161 (32%), Gaps = 21/161 (13%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           +A+F D  N    S     D+    +  A R   +V  A    +  GD     +    L 
Sbjct: 52  VAIFWDIENCPVPSDVRPEDV-AGNVRMALRLHPVVKGAVTMLSAYGDFN---AFPRRLR 107

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGC 124
           +     G ++V                K + D  + VD F  +        +++ SGD  
Sbjct: 108 EGCQRTGVKLVDVP----------NGRKDAADKAILVDMFLFALDNRPPSSIMLISGDVD 157

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165
           F   +  L ++     +++   S     S  L   A  F+ 
Sbjct: 158 FAPALHILGQRG-YTIVLAIPSSV--TVSSAL-SSAGSFVW 194


>gi|297597805|ref|NP_001044557.2| Os01g0805100 [Oryza sativa Japonica Group]
 gi|55296825|dbj|BAD68169.1| unknown protein [Oryza sativa Japonica Group]
 gi|255673790|dbj|BAF06471.2| Os01g0805100 [Oryza sativa Japonica Group]
          Length = 259

 Score = 42.7 bits (99), Expect = 0.024,   Method: Composition-based stats.
 Identities = 20/192 (10%), Positives = 55/192 (28%), Gaps = 24/192 (12%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M +  +++A +ID  +L +    +     + +    + ++  +       + V   +   
Sbjct: 38  MPEEGKRLAFYIDIEHLQSVVGIVEHK-RFWEDWDKWGAQGQLGVRIIEDSRVAPTKFSK 96

Query: 61  SPL-------------HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAF 107
           S               +   +        V+               +   +   + VD  
Sbjct: 97  SRDPLIVRKFGDVEPGNYWYNVCEGEAEHVLRPPQGAIRTAPSLMDIVDGIISRMQVD-- 154

Query: 108 EQSEGLEHLVIFSGDGCF-TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
                 + + +   DG     +   L    ++V +    ++   +  D L+ +      L
Sbjct: 155 -----FDSVHVGGNDGNLRRRIEERLNGGGRQVYVAGEGINVVLL--DALKAKYSSVHYL 207

Query: 167 AYLKNEIARDPD 178
              +   ARD  
Sbjct: 208 DAFEELWARDSK 219


>gi|254779696|ref|YP_003057802.1| hypothetical protein HELPY_1119 [Helicobacter pylori B38]
 gi|254001608|emb|CAX29697.1| Conserved hypothetical protein [Helicobacter pylori B38]
          Length = 263

 Score = 42.7 bits (99), Expect = 0.025,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 63/214 (29%), Gaps = 63/214 (29%)

Query: 10  LFIDGANLYASSKAL----------GFDID-----YRKLLKAFRSRAIVIRAYYYTTVV- 53
           +F+D  NL A  KA+           F+ +        +         + R Y+Y +   
Sbjct: 8   IFVDWENLLADLKAIQETDERLKEPNFNFNNPDQLLALIRSFLEPEEELKRIYFYVSEPF 67

Query: 54  ----------GDPEQQFSPLHPLLDWLHYNGF----------------------QVVAKV 81
                      + E +        D+                            +V  K 
Sbjct: 68  TEVEPRIKGNKNEELEEYKEKNPKDYEERVNKSGIIQSFNHEIAQQNQVELRVGRVKFKF 127

Query: 82  AKEFTEN------------CGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTT 127
             +F +                K  +  +DV LA D      ++    +++FS D  F  
Sbjct: 128 VYKFEDKEVCNGLEAKIFIPYLKLRQKQVDVLLAHDITRLYCTKQGGCILLFSRDTDFVP 187

Query: 128 LVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
           ++ A   K  +V  ++ +   P+     L++  +
Sbjct: 188 VLEAAWEKGFEV-FIANIQESPNSVPSDLKKSCN 220


>gi|15612138|ref|NP_223790.1| hypothetical protein jhp1073 [Helicobacter pylori J99]
 gi|4155667|gb|AAD06653.1| putative [Helicobacter pylori J99]
          Length = 285

 Score = 42.7 bits (99), Expect = 0.025,   Method: Composition-based stats.
 Identities = 30/236 (12%), Positives = 69/236 (29%), Gaps = 64/236 (27%)

Query: 10  LFIDGANLYASSKAL----------GFDID-----YRKLLKAFRSRAIVIRAYYYTTVV- 53
           +F+D  NL A  KA+           F+ +        +         + R Y+Y +   
Sbjct: 30  IFVDWENLLADLKAIQETDERLKESNFNFNNPEQLLALIRSFLEPEEELKRIYFYVSEPF 89

Query: 54  --------------------------GDPEQQFSPLHPLLDWLHYNG----------FQV 77
                                      +   +   +      +              F  
Sbjct: 90  TEVEPRIKSNKKEELEEYKEKNPKEYEEKVNKSGIIQSFNHAIAQQNQVKLRVGRVRFMF 149

Query: 78  VAKVAKEFTEN--------CGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTT 127
                 +               +  +  +D  LA D  +   ++ L  +V+FS D  F  
Sbjct: 150 KDMPKDQRVHGGLEAEILIPHLELRQKQIDALLAHDITKLYCTKPLGCVVLFSKDTDFVP 209

Query: 128 LVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD-YFMDLAYLKNEIARDPDEDKK 182
           ++ A   K  +V  ++ +   P+     L++  +    ++A + + + ++    KK
Sbjct: 210 VLEAAWEKGFEV-FIANIQESPNSVPSDLKKSCNVRERNVAEIVDNLPKNQYTPKK 264


>gi|119961979|ref|YP_948879.1| hypothetical protein AAur_3182 [Arthrobacter aurescens TC1]
 gi|119948838|gb|ABM07749.1| conserved hypothetical protein [Arthrobacter aurescens TC1]
          Length = 170

 Score = 42.3 bits (98), Expect = 0.027,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 29/87 (33%), Gaps = 10/87 (11%)

Query: 77  VVAKVAKEFTENCGRKRVKSSMDVEL--AVDAFEQSEGLEHLVIFSGDGCFTTLVAALQR 134
           V+ +   +     G    +   D  L  A+D    S     LVI SGDG FT L     R
Sbjct: 73  VLPRQGIQRVVGSG----QDGADNALLHAIDITHDSRRFSRLVIGSGDGIFTELALKAAR 128

Query: 135 KVKKVTIVSTVLSDPSMASDQLRRQAD 161
              +V  V          S +L     
Sbjct: 129 NGMEVEQVV----GRGRPSRRLMAACT 151


>gi|302339827|ref|YP_003805033.1| hypothetical protein Spirs_3345 [Spirochaeta smaragdinae DSM 11293]
 gi|301637012|gb|ADK82439.1| hypothetical protein Spirs_3345 [Spirochaeta smaragdinae DSM 11293]
          Length = 332

 Score = 42.3 bits (98), Expect = 0.027,   Method: Composition-based stats.
 Identities = 22/139 (15%), Positives = 38/139 (27%), Gaps = 17/139 (12%)

Query: 31  RKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCG 90
           + LL    S   +  A  Y     +              LH   F+++            
Sbjct: 25  KGLLDYVHSYGRISIARVYGDFAKN------RFARAAAELHRESFEMIHIP-------DS 71

Query: 91  RKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS 150
            K           +        ++ L++ SG   F  L+  L+    +  +         
Sbjct: 72  AKEEYPDTITGGVIALLALHPHIDQLLLISGRKSFAPLLRQLRTLDLETMVFCDARKAD- 130

Query: 151 MASDQLRRQADYFMDLAYL 169
              +QL   AD F D   L
Sbjct: 131 ---EQLLLLADDFGDFRDL 146


>gi|326427441|gb|EGD73011.1| hypothetical protein PTSG_04720 [Salpingoeca sp. ATCC 50818]
          Length = 615

 Score = 42.3 bits (98), Expect = 0.027,   Method: Composition-based stats.
 Identities = 23/150 (15%), Positives = 48/150 (32%), Gaps = 21/150 (14%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKL---LKAFRSRAIVI--RAYYYTTVVGDPEQQ 59
           + +  L IDG  +  ++ +     DY ++   +        V     +Y+     D    
Sbjct: 26  QRRAVLMIDGGYMR-NADSTSVFSDYDRIQWIMHKIAEDFDVEFEELHYFDADFSDSPAH 84

Query: 60  -------FSPLHPLLDWLHYNGFQVVAKVAKE------FTENCGRKRVKSSMDVELAVDA 106
                     L  L+  L            K             R  +++ +DV  A   
Sbjct: 85  HGISKSGKKSLVTLVKVLRRAHVFCHILPLKYKTTTCSRCHAQNRNLMQAGVDVAFATHM 144

Query: 107 FEQS--EGLEHLVIFSGDGCFTTLVAALQR 134
            + +   G++ +V++ GDG F   +   + 
Sbjct: 145 IKVALKPGIDTIVLWCGDGDFFEAMKMCRE 174


>gi|256824702|ref|YP_003148662.1| hypothetical protein Ksed_08430 [Kytococcus sedentarius DSM 20547]
 gi|256688095|gb|ACV05897.1| hypothetical protein Ksed_08430 [Kytococcus sedentarius DSM 20547]
          Length = 190

 Score = 42.3 bits (98), Expect = 0.028,   Method: Composition-based stats.
 Identities = 24/168 (14%), Positives = 54/168 (32%), Gaps = 34/168 (20%)

Query: 10  LFIDGANLYASSKA-LGF--DIDYRKLLKAFRSR-----AIVIRAYYYTTVVGDPEQQFS 61
           L +DG N+ A+    LG     D R   +   +         +   ++     D      
Sbjct: 12  LLVDGENIDATLGNCLGRRPQPDERPRWERLLTHVQSSWEQPVTGLFFLAASEDHLP--- 68

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
                +  L   G++ +                +  +D+ +       +E  + +V+ S 
Sbjct: 69  --MNFVQALMAIGYKPIPL---------SGAADEKVVDIAIQKTLEALAERSDDVVLVSH 117

Query: 122 DGCFTTLVAALQ-RKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
           DG F   + AL   + +++ ++            + R     F++L  
Sbjct: 118 DGDFLPQMTALLDDEDRRLGLMGF---------REYRNA--GFVELEE 154


>gi|239918681|ref|YP_002958239.1| hypothetical protein Mlut_22170 [Micrococcus luteus NCTC 2665]
 gi|239839888|gb|ACS31685.1| hypothetical protein Mlut_22170 [Micrococcus luteus NCTC 2665]
          Length = 247

 Score = 42.3 bits (98), Expect = 0.029,   Method: Composition-based stats.
 Identities = 24/181 (13%), Positives = 49/181 (27%), Gaps = 52/181 (28%)

Query: 8   IALFIDGANLYASSKALGFDIDYR----KLLKAFRSRAIVIRAYYYTTVVGDPE------ 57
            A+ +DG      +  L    D      +LL+  R      R+  Y     D        
Sbjct: 7   TAILVDGGFYRKRAARLFGHKDPEARADELLEYCRRHTRKTRSRLYRIFYYDCPPSEKVV 66

Query: 58  --------------QQFSPLHPLLDWLHYN---------------GFQVVAKVAKEF--- 85
                           +  +      L                  G+Q+ A+  K+    
Sbjct: 67  YHPLTQKSVNLAKTDDYRWMTDFHAALLKKRKVALRRGETLETQSGYQIKAQPLKKLLRG 126

Query: 86  --------TENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRK 135
                    ++      +  +D+ + +D    +  E +  +++ SGD  F       +R 
Sbjct: 127 EISVADLEADDFLLDITQKGVDMRVGLDIAALAATEPVNQIIMISGDSDFVPAGKHARRS 186

Query: 136 V 136
            
Sbjct: 187 G 187


>gi|284988699|ref|YP_003407253.1| hypothetical protein Gobs_0072 [Geodermatophilus obscurus DSM
           43160]
 gi|284061944|gb|ADB72882.1| hypothetical protein Gobs_0072 [Geodermatophilus obscurus DSM
           43160]
          Length = 268

 Score = 42.3 bits (98), Expect = 0.029,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 43/108 (39%), Gaps = 12/108 (11%)

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
            L   ++ L   GF V A+  ++  +       ++ +D    +D    S  L  LV+FSG
Sbjct: 130 SLQRWVEALRGFGFAVFARPKQQPDD----DIDQAMLD---HIDVRRHSHRLRRLVVFSG 182

Query: 122 DG-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
           DG  F   +  L R   +VT+V+            L      F+D+  
Sbjct: 183 DGRNFAEPLEELARTGTQVTVVAFSEVAGYAIGSDLL----EFIDIED 226


>gi|320537841|ref|ZP_08037758.1| hypothetical protein HMPREF9554_02512 [Treponema phagedenis F0421]
 gi|320145310|gb|EFW37009.1| hypothetical protein HMPREF9554_02512 [Treponema phagedenis F0421]
          Length = 250

 Score = 42.3 bits (98), Expect = 0.032,   Method: Composition-based stats.
 Identities = 13/127 (10%), Positives = 37/127 (29%), Gaps = 2/127 (1%)

Query: 17  LYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQ 76
           LY        D    +     +     +       +        +  + L + +    F 
Sbjct: 81  LYHPVLEKSIDFSKTETYTWMKEFIENLIHQRKVALRMGVLADNTAYYGLKNEIAKKLFS 140

Query: 77  VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQR 134
              +V      +      +  +D+++ +D    +     + +V+ +GD  F       +R
Sbjct: 141 GRLQVTDITETDFDLVLRQKGVDMKIGIDIATLAYKKLADQIVLITGDSDFVPAAKLARR 200

Query: 135 KVKKVTI 141
           +     +
Sbjct: 201 EGIDFIV 207


>gi|300088531|ref|YP_003759053.1| hypothetical protein Dehly_1445 [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
 gi|299528264|gb|ADJ26732.1| conserved hypothetical protein [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
          Length = 241

 Score = 42.3 bits (98), Expect = 0.033,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 57/213 (26%), Gaps = 56/213 (26%)

Query: 7   KIALFIDGANLYASSKAL--GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ---FS 61
           K  ++IDG NLY  +        ++  ++ +       + +  Y+T  V           
Sbjct: 2   KTNVYIDGFNLYYGALKYTGYKWLNLYEMCRRLFPSDSINKIRYFTARVKPSPHDINAPV 61

Query: 62  PLHPLLDWLH----------------------------------YNGFQVVAKVAKEF-- 85
                L  L                                        ++ K    +  
Sbjct: 62  RQDIYLRALRTIPEITIFEGRYVQHPTLAAQYPLVYLNHPKKHTALKPSIITKPEFAYMA 121

Query: 86  ----------TENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFT-TLVAAL 132
                           KR +   DV LA            E  V+ S D      +   +
Sbjct: 122 DGCSLPSSSPICTYILKREEKGSDVNLASMLLSDCYEGDFEKAVVISNDSDLCMPIELVM 181

Query: 133 QRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165
           +R  + VT+V     D S  S  L+  A  +++
Sbjct: 182 RRCNRPVTVV--NPHDKSYQSVHLKNIAGNYLN 212


>gi|51209447|ref|YP_063410.1| cpp15 [Campylobacter coli]
 gi|39979655|gb|AAR29499.1| cpp15 [Campylobacter coli]
 gi|315059224|gb|ADT73552.1| cpp15 [Campylobacter jejuni subsp. jejuni S3]
          Length = 242

 Score = 41.9 bits (97), Expect = 0.033,   Method: Composition-based stats.
 Identities = 14/99 (14%), Positives = 34/99 (34%), Gaps = 3/99 (3%)

Query: 44  IRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEF-TENCGRKRVKSSMDVEL 102
           +R   Y  V      + S      D+  +           E  +E+      +  +D+++
Sbjct: 109 LRKQPYFAVRLGEIDENSFQWKFRDYDKFRKILRKEIDICELTSEDFVLDIKQKGVDMKI 168

Query: 103 AVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKV 139
            +D    +     E +++ + D  F   V   +++   V
Sbjct: 169 GLDIATLANKHHAEKIILITADSDFIPAVKHARKEGIIV 207


>gi|192361640|ref|YP_001984103.1| hypothetical protein CJA_3650 [Cellvibrio japonicus Ueda107]
 gi|190687805|gb|ACE85483.1| conserved hypothetical protein [Cellvibrio japonicus Ueda107]
          Length = 281

 Score = 41.9 bits (97), Expect = 0.034,   Method: Composition-based stats.
 Identities = 9/50 (18%), Positives = 22/50 (44%), Gaps = 2/50 (4%)

Query: 94  VKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTI 141
            +  +D+ + VD    +  + ++ LV+ +GD  F       +R+     +
Sbjct: 187 KQKGVDMRIGVDIASLALKKQVDTLVLVAGDSDFVPAAKLARREGIDFIL 236


>gi|237751873|ref|ZP_04582353.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229376706|gb|EEO26797.1| conserved hypothetical protein [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 242

 Score = 41.9 bits (97), Expect = 0.035,   Method: Composition-based stats.
 Identities = 14/99 (14%), Positives = 32/99 (32%), Gaps = 3/99 (3%)

Query: 44  IRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTEN-CGRKRVKSSMDVEL 102
           +R   Y  V      + S      D+  +           E T         +  +D+++
Sbjct: 109 LRKQPYFAVRLGEIDENSFQWKFRDYDKFRKILRKEIDIGELTNEDFVLDIKQKGVDMKI 168

Query: 103 AVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKV 139
            +D    +     E +++ + D  F   V   +++   V
Sbjct: 169 GLDIATLANKHQAEKIILITADSDFIPAVKHARKEGIIV 207


>gi|292670860|ref|ZP_06604286.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
 gi|292647481|gb|EFF65453.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
          Length = 286

 Score = 41.9 bits (97), Expect = 0.036,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 45/167 (26%), Gaps = 30/167 (17%)

Query: 1   MFDP-REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
           M D   + +A+  D  N                          + +A  Y          
Sbjct: 1   MLDSSNDTVAILYDIENAPIEMLQY-----------------TIDKAQRYQPCRMIIVSD 43

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA-FEQSEGLEHLVI 118
           +        W     +         F +       K+S+D  L   A     EG+    I
Sbjct: 44  WEAHPEQKRWDRLMQY-----PDFTFRQISRTFYGKNSLDSALYDSAQILYQEGVRKYFI 98

Query: 119 FSGDGCFTTLVAALQRKV-KKVTIVSTVLSDPSMASDQLRRQADYFM 164
            + D  F  +  +L  +    +  V T       AS+ LR   + F 
Sbjct: 99  ITTDSDFVRIAESLNAEDPSYIIGVGTKQ-----ASEDLRNAYNEFF 140


>gi|207721985|ref|YP_002252423.1| hypothetical protein (partial sequence c terminus) [Ralstonia
           solanacearum MolK2]
 gi|206587158|emb|CAQ17742.1| hypothetical protein (partial sequence c terminus) [Ralstonia
           solanacearum MolK2]
          Length = 175

 Score = 41.9 bits (97), Expect = 0.037,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 29/75 (38%), Gaps = 3/75 (4%)

Query: 89  CGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRK-VKKVTIVSTV 145
              +  +   DV LA+ A+  +    ++H+VI S D      +  ++      V +V   
Sbjct: 2   PIWRLEEKQTDVNLALHAYHDAMTAQVDHVVIASNDTDLVPALRMIREHTSVTVGLVIPT 61

Query: 146 LSDPSMASDQLRRQA 160
                  ++ L + A
Sbjct: 62  RDSERRPNEDLAKYA 76


>gi|121608659|ref|YP_996466.1| hypothetical protein Veis_1693 [Verminephrobacter eiseniae EF01-2]
 gi|121553299|gb|ABM57448.1| conserved hypothetical protein [Verminephrobacter eiseniae EF01-2]
          Length = 236

 Score = 41.9 bits (97), Expect = 0.041,   Method: Composition-based stats.
 Identities = 7/45 (15%), Positives = 20/45 (44%), Gaps = 2/45 (4%)

Query: 94  VKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKV 136
            +  +D+ + +D    +    ++ +V+ +GD  F       +R+ 
Sbjct: 147 RQKGVDMRIGIDIASLAFKRQVDQIVLVAGDADFVPAAKLARREG 191


>gi|269957712|ref|YP_003327501.1| hypothetical protein Xcel_2936 [Xylanimonas cellulosilytica DSM
           15894]
 gi|269306393|gb|ACZ31943.1| conserved hypothetical protein [Xylanimonas cellulosilytica DSM
           15894]
          Length = 186

 Score = 41.9 bits (97), Expect = 0.042,   Method: Composition-based stats.
 Identities = 22/153 (14%), Positives = 46/153 (30%), Gaps = 9/153 (5%)

Query: 4   PREKIALFIDGANLYASS--KALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
            + K  L +DG N+ A+     LG   +  +       R    R   +   V   +    
Sbjct: 2   SQRKTYLLVDGENIDATLGMNVLGRRPNPDE-------RPRWDRITAFAAQVWGQDVVPL 54

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
                        F                   +  +D+ +       +E    +++ S 
Sbjct: 55  FFLNATSGQMPMPFVQALLAMGYRPIPLAGSATEKVVDIGIQRTLDALAERDGDVLLASH 114

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASD 154
           DG F   + AL    +KV +++      +  ++
Sbjct: 115 DGDFLPQIEALLGSDRKVGLLAFREFVNAKFAE 147


>gi|320531414|ref|ZP_08032380.1| hypothetical protein HMPREF9057_00244 [Actinomyces sp. oral taxon
           171 str. F0337]
 gi|320136367|gb|EFW28349.1| hypothetical protein HMPREF9057_00244 [Actinomyces sp. oral taxon
           171 str. F0337]
          Length = 208

 Score = 41.5 bits (96), Expect = 0.046,   Method: Composition-based stats.
 Identities = 22/160 (13%), Positives = 45/160 (28%), Gaps = 32/160 (20%)

Query: 9   ALFIDGANLYASSKAL--------GFDIDYRKLLKAFRSRA----------IVIRAYYYT 50
           A+ +D  N++ +   L           ID  +                    V R   + 
Sbjct: 2   AVVVDYQNVHLTGAGLYTPGCPPEDALIDPYRFASQLAQARNATNDDMHQVEVSRVEVFR 61

Query: 51  TVV-----GDPEQQFSPLHPLLDWLHYNGFQVVAKVAK---EFTENCGR----KRVKSSM 98
            +       D  ++           H+    V  +  K   E+ +   R     R +  +
Sbjct: 62  GLPIPEDDSDAYRRNQAQQAQWTRGHHGVVNVTLRPLKYSWEYIDGVRRPVRSSRQEKGV 121

Query: 99  DVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136
           DV  A+   + +     + +V+ S D      +    R  
Sbjct: 122 DVLCALMLVDLARCGLYDVVVLASRDTDLAPALDNAARTG 161


>gi|227834183|ref|YP_002835890.1| hypothetical protein cauri_2361 [Corynebacterium aurimucosum ATCC
           700975]
 gi|262183327|ref|ZP_06042748.1| hypothetical protein CaurA7_04992 [Corynebacterium aurimucosum ATCC
           700975]
 gi|227455199|gb|ACP33952.1| hypothetical protein cauri_2361 [Corynebacterium aurimucosum ATCC
           700975]
          Length = 203

 Score = 41.5 bits (96), Expect = 0.047,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 53/180 (29%), Gaps = 29/180 (16%)

Query: 10  LFIDGANLYASSKA---------LGFDID-YRKLLKAFRSRAIVI-RAYYYTTVVGDPEQ 58
           L  D  N+     A              D   + L            A  +T V      
Sbjct: 7   LVWDAPNMDMGLGAILGGRPTAAYRPRFDAIGRWLVELAFDNDATPEAAVFTNVTPGGAD 66

Query: 59  QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVI 118
               + P ++ +   GF V AK          +      +D ++        E L  +++
Sbjct: 67  ---VIRPWVEAIRNVGFAVFAKP---------KLHEDDDVDPDMVEYIKANRENLSGVIV 114

Query: 119 FSGDG-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
            S DG  F  L+  L        ++         AS  L      F+DL  ++    R+P
Sbjct: 115 ASADGQNFQHLLEQLNASGLPTCVLGFH----EHASWALTHPDIEFVDLEDIEGVF-REP 169


>gi|332705555|ref|ZP_08425633.1| hypothetical protein LYNGBM3L_08400 [Lyngbya majuscula 3L]
 gi|332355915|gb|EGJ35377.1| hypothetical protein LYNGBM3L_08400 [Lyngbya majuscula 3L]
          Length = 475

 Score = 41.5 bits (96), Expect = 0.052,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 47/139 (33%), Gaps = 31/139 (22%)

Query: 8   IALFI-DGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           IA+ + D  NL  +++         K L    S  I I+              +  +   
Sbjct: 134 IAILLLDAENLRLNTET-------EKFLAQICSYPIQIKIAV---------ANWRAMGKY 177

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAV---DAFEQSEGLEHLVIFSGDG 123
              LH  G++++                K S D ++A      F      + +++ S DG
Sbjct: 178 DTELHSRGYELIHVP-----------PGKDSADFKMATVGASIFIHYPTAKEVLVCSSDG 226

Query: 124 CFTTLVAALQRKVKKVTIV 142
             T L   LQ    KV +V
Sbjct: 227 VMTHLCTTLQTHGLKVYLV 245


>gi|330466560|ref|YP_004404303.1| LacI family transcriptional regulator [Verrucosispora maris
           AB-18-032]
 gi|328809531|gb|AEB43703.1| transcriptional regulator, laci family protein [Verrucosispora
           maris AB-18-032]
          Length = 318

 Score = 41.5 bits (96), Expect = 0.056,   Method: Composition-based stats.
 Identities = 21/163 (12%), Positives = 47/163 (28%), Gaps = 30/163 (18%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M  P  + A F+D  N+  + +A          ++    R    R         D     
Sbjct: 134 MLHPEAQPASFVDVDNVGGARQA----------VEYLAGRGR--RRIATIAGPQDMGAGL 181

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           + L    D +   GF  +      + +        +           E+   L+ + + +
Sbjct: 182 ARLSGYRDAVRSAGFG-INPDLIGYGDFSEESGATAM------RHLLERCPDLDAVFVAA 234

Query: 121 GDGCFTTLVAALQRKVKK----VTIVST------VLSDPSMAS 153
               F   +  L+   ++    V ++          + P + S
Sbjct: 235 DLMAF-GAMRTLRESGRRIPEDVAVIGFDDAPIARQAVPPLTS 276


>gi|302912167|ref|XP_003050653.1| hypothetical protein NECHADRAFT_85184 [Nectria haematococca mpVI
           77-13-4]
 gi|256731590|gb|EEU44940.1| hypothetical protein NECHADRAFT_85184 [Nectria haematococca mpVI
           77-13-4]
          Length = 733

 Score = 41.2 bits (95), Expect = 0.058,   Method: Composition-based stats.
 Identities = 24/197 (12%), Positives = 54/197 (27%), Gaps = 54/197 (27%)

Query: 1   MFDPREKI-ALFIDGANLYASS------------------KALGFDIDYRKLLKAFRSRA 41
           M +  ++I   F+D +N++  +                  +     I+  KL+K      
Sbjct: 2   MTEEDKEICMFFVDDSNIWIEAQKFAASGNSHMPKLTDRDRDPRLRINIGKLVKTLLGGR 61

Query: 42  IVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVE 101
               +Y Y +     +  ++             F+               +  +  +D  
Sbjct: 62  FQGTSYLYGSRPPPNDAVWNTFEKY-------NFRTKI--------YNRSRGKEKQVDSA 106

Query: 102 LAVDAFEQSEGLEH----------------LVIFSGDGCFTTLVAALQRKVKKVTIVSTV 145
           +A D    S  L                   +  +GD      +        +V + +  
Sbjct: 107 MATDLSHTSTKLSTMADFLPEIKEENKRTVFIAITGDQDMVPPITQALDDGFRVELWA-- 164

Query: 146 LSDPSMASDQLRRQADY 162
               S  S + R+ A+ 
Sbjct: 165 --WKSGISSEYRKLANE 179


>gi|190015967|ref|YP_001965175.1| hypothetical protein PNSL1.072 [Rhodococcus sp. NS1]
 gi|114796807|gb|ABI79400.1| hypothetical protein PNSL1.072 [Rhodococcus sp. NS1]
          Length = 224

 Score = 41.2 bits (95), Expect = 0.058,   Method: Composition-based stats.
 Identities = 19/151 (12%), Positives = 41/151 (27%), Gaps = 18/151 (11%)

Query: 5   REKIALFIDGANLYASSK-ALGFDI------------DYRKLLKAFRSRAIVIRAYYYTT 51
           R+++ +F+D   +  S++ A G+ +            +   L         V        
Sbjct: 37  RDRVDVFLDMGYVIRSARTAFGWRVGSRTPDPLATAREILALRYRSSELGTVHVFDGLHD 96

Query: 52  VVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE 111
               P      L             V  +  +   +       +  +D  LA    + + 
Sbjct: 97  PDRRPLDHHRMLDWKHQVEASGEVIVHLRPLQYLPDGG---FRQKEVDTSLAFAMDDAAR 153

Query: 112 --GLEHLVIFSGDGCFTTLVAALQRKVKKVT 140
               E +V F+GD         +     +  
Sbjct: 154 SGRTEAIVAFTGDRDLLPAARRVIAADVRFE 184


>gi|57237868|ref|YP_179116.1| hypothetical protein CJE1124 [Campylobacter jejuni RM1221]
 gi|57166672|gb|AAW35451.1| conserved domain protein [Campylobacter jejuni RM1221]
          Length = 180

 Score = 41.2 bits (95), Expect = 0.059,   Method: Composition-based stats.
 Identities = 7/50 (14%), Positives = 22/50 (44%), Gaps = 2/50 (4%)

Query: 92  KRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKV 139
              +  +D+++ +D    +    +E +++ + D  F   V   +++   V
Sbjct: 96  DIKQKGVDMKIGLDIATLANKHQVEKIILITSDSDFVPAVKHARKEGLIV 145


>gi|207092671|ref|ZP_03240458.1| hypothetical protein HpylHP_07376 [Helicobacter pylori
           HPKX_438_AG0C1]
          Length = 120

 Score = 41.2 bits (95), Expect = 0.062,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 30/70 (42%), Gaps = 3/70 (4%)

Query: 94  VKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151
            +  +D  LA D  +   ++    +++FS D  F  ++ A   K  +V  ++ +   P  
Sbjct: 8   RQKQIDALLAHDITKLYCTKQGGCILLFSKDTDFVPVLEAAWEKGFEV-FIAKIKESPIS 66

Query: 152 ASDQLRRQAD 161
               L++  D
Sbjct: 67  VPSDLKKSCD 76


>gi|326433886|gb|EGD79456.1| hypothetical protein PTSG_10022 [Salpingoeca sp. ATCC 50818]
          Length = 1243

 Score = 41.2 bits (95), Expect = 0.062,   Method: Composition-based stats.
 Identities = 27/179 (15%), Positives = 49/179 (27%), Gaps = 45/179 (25%)

Query: 10  LFIDGANLY--------ASS-----KALGFDIDYRKLLKAF-RSRAIVIRAYYYTTVVGD 55
           LF+D +N +         S      + + F I    L+         +  A+ + +   +
Sbjct: 8   LFVDDSNFWIEGQKACAHSLGLKEPRDVRFRIHLENLIAFVTVKYGPIKGAHLFASEAFN 67

Query: 56  PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMD----VELAVDAFEQSE 111
            +  +                      K    +   +  +  +D    VELA  A    E
Sbjct: 68  SDGVWRKAKE--------------VKFKVHNFSRSLRGKEKEVDQAVCVELAFQAAVTRE 113

Query: 112 GLEH--LVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
             E    VI +GD      V         V +++                AD +  L  
Sbjct: 114 RHEEASFVIVTGDRDMMPAVHKALSCGIHVHLLAFSSGL-----------ADQYKHLDK 161


>gi|222624986|gb|EEE59118.1| hypothetical protein OsJ_10996 [Oryza sativa Japonica Group]
          Length = 1004

 Score = 41.2 bits (95), Expect = 0.063,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 39/114 (34%), Gaps = 11/114 (9%)

Query: 50  TTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ 109
             V           H ++  L   GF         F     R R K   D ++ VD    
Sbjct: 22  CGVPPCCRDPHRVAHGVIAALAAAGF---PGPVSIFAYGRRRPRAKDGTDKKMLVDMLFW 78

Query: 110 S---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160
           +       + ++ SGD  F+ L+  L+ K         +L+ PS  S ++   A
Sbjct: 79  AFDNPPPGNYLLISGDQDFSDLLHRLRMKR-----YGILLAQPSNVSSRVLAAA 127


>gi|229844492|ref|ZP_04464632.1| hypothetical protein CGSHi6P18H1_09260 [Haemophilus influenzae
           6P18H1]
 gi|229812741|gb|EEP48430.1| hypothetical protein CGSHi6P18H1_09260 [Haemophilus influenzae
           6P18H1]
          Length = 273

 Score = 41.2 bits (95), Expect = 0.066,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 25/58 (43%), Gaps = 2/58 (3%)

Query: 86  TENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTI 141
            ++   +  + S+DV+L +D    S    ++ +V+ +GD  F       + K     +
Sbjct: 150 NDDWYYEITQKSVDVKLGMDITILSYEKLVDVIVLIAGDSDFVPAAKQARIKGVDFIL 207


>gi|242214336|ref|XP_002472991.1| predicted protein [Postia placenta Mad-698-R]
 gi|220727901|gb|EED81807.1| predicted protein [Postia placenta Mad-698-R]
          Length = 183

 Score = 41.2 bits (95), Expect = 0.069,   Method: Composition-based stats.
 Identities = 16/137 (11%), Positives = 38/137 (27%), Gaps = 19/137 (13%)

Query: 3   DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
           +  + ++LF D  N     ++        +LL+       +     Y             
Sbjct: 31  ENSKTVSLFWDMENCGLRLRSKD-GFTIEELLRFAEGFGCLKTLNAYLDKSH------HA 83

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLE---HLVIF 119
               L      GF ++                ++ +D  +  D    +        +V+ 
Sbjct: 84  TSSSLSAFRSQGFNIIDCP---------HNGERNVVDRRMIDDMMAWAARNPAPVTMVLI 134

Query: 120 SGDGCFTTLVAALQRKV 136
           +GD  +    + L  + 
Sbjct: 135 AGDKDYVKAASTLSTRG 151


>gi|116788141|gb|ABK24771.1| unknown [Picea sitchensis]
          Length = 393

 Score = 41.2 bits (95), Expect = 0.069,   Method: Composition-based stats.
 Identities = 18/153 (11%), Positives = 42/153 (27%), Gaps = 18/153 (11%)

Query: 23  ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVA 82
                I ++K  +    R  + R     ++ G  +  F          +      V    
Sbjct: 135 KFKTHIKFQKHFRQLHEREQLKRLRRLDSLKGKKKDAFRAKIVPKQEKYRVVANQVLVPK 194

Query: 83  --------KEFTENCGRKRVKS--SMDVELAVDAFEQSEG-LEHLVIFSGDGCFTTLVAA 131
                    +              + D+ L     +  +  ++ L + S D  F  ++  
Sbjct: 195 VGYGLAGEIKRAGFWVITVSDKPQAADIALKKHMMDCMDKGIDCLCLVSDDTDFVEVLKV 254

Query: 132 LQRKVKKVTIVSTVLSDPSMASDQLRRQADYFM 164
            + +  +  +V             L+R AD + 
Sbjct: 255 ARARSLRTVVVGDNAGG-------LKRFADAYF 280


>gi|332673942|gb|AEE70759.1| conserved hypothetical protein [Helicobacter pylori 83]
          Length = 266

 Score = 41.2 bits (95), Expect = 0.070,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 31/70 (44%), Gaps = 3/70 (4%)

Query: 94  VKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151
            +  +D  LA D  +   ++    +++FS D  F  ++ A   K  +V I +     P++
Sbjct: 155 HQKQIDALLAHDITKLYRTKQGGCILLFSKDTDFVPVLEATWEKGFQVFIANIQEG-PNL 213

Query: 152 ASDQLRRQAD 161
               LR+  D
Sbjct: 214 VPPDLRKSCD 223


>gi|302785307|ref|XP_002974425.1| hypothetical protein SELMODRAFT_57723 [Selaginella moellendorffii]
 gi|300158023|gb|EFJ24647.1| hypothetical protein SELMODRAFT_57723 [Selaginella moellendorffii]
          Length = 152

 Score = 40.8 bits (94), Expect = 0.079,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 49/164 (29%), Gaps = 24/164 (14%)

Query: 7   KIALFIDGAN--LYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
           KI ++ D  N  +     A    ++    L++   +  V                     
Sbjct: 1   KIGVWWDFENCNVPYGIDAHRVGLNIVSGLRSSGFKGPVSI--------SGYGDMLQLSR 52

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSG 121
            + + L   G ++            G K  + S D  L +D    +       HL + SG
Sbjct: 53  CVQESLSATGIRLHHVP-------SGGKESE-SSDRALLMDLILWTIENPPPAHLFLISG 104

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165
           D  F+T +  L+ +   V +        +  S  L   A     
Sbjct: 105 DRDFSTALHKLRMRNYNVLLAC---PAGAYISPSLLGAASRVWY 145


>gi|261838472|gb|ACX98238.1| hypothetical protein KHP_1042 [Helicobacter pylori 51]
          Length = 215

 Score = 40.8 bits (94), Expect = 0.079,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 31/75 (41%), Gaps = 3/75 (4%)

Query: 89  CGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVL 146
              K  +  +D  LA D  +   ++    +++FS D  F  ++ A   K   V I +   
Sbjct: 98  PHLKLRQKQIDALLAHDITKLYCTKQGGCILLFSKDTDFVPVLEAAWEKGFGVFIANIQE 157

Query: 147 SDPSMASDQLRRQAD 161
             P++    LR+  D
Sbjct: 158 G-PNLVPPDLRKSCD 171


>gi|330822484|ref|XP_003291681.1| hypothetical protein DICPUDRAFT_99095 [Dictyostelium purpureum]
 gi|325078117|gb|EGC31786.1| hypothetical protein DICPUDRAFT_99095 [Dictyostelium purpureum]
          Length = 1309

 Score = 40.8 bits (94), Expect = 0.081,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 61/178 (34%), Gaps = 28/178 (15%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           + +F D  N    S   G  +    +      R ++     +  +    ++  S L    
Sbjct: 49  VNVFWDLENCAVPSNLKGIHV-VNAIRSFALQRGVLKNISAFANLKLIRDELRSNLQ--- 104

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGC 124
                 G  +              +   ++ D+ + V+  +     +    +V+ SGD  
Sbjct: 105 ----ECGVLLHDV----------TRNKSNASDIAILVEILKLVIDNKPPHCIVLISGDRD 150

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD-YFMDLAYLKNEIARDPDEDK 181
           F+ ++  L  +  +V ++       + ASD L+  A   +  ++ LK  I + P    
Sbjct: 151 FSNVLNTLTFRRYQVFLI-----HSTHASDVLKYSATASYEWISLLKGTI-KAPSSPP 202


>gi|302866160|ref|YP_003834797.1| periplasmic binding protein/LacI transcriptional regulator
           [Micromonospora aurantiaca ATCC 27029]
 gi|315502718|ref|YP_004081605.1| transcriptional regulator, laci family [Micromonospora sp. L5]
 gi|302569019|gb|ADL45221.1| periplasmic binding protein/LacI transcriptional regulator
           [Micromonospora aurantiaca ATCC 27029]
 gi|315409337|gb|ADU07454.1| transcriptional regulator, LacI family [Micromonospora sp. L5]
          Length = 348

 Score = 40.8 bits (94), Expect = 0.082,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 53/160 (33%), Gaps = 28/160 (17%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           M  P  + A F+D  N+  + +A          ++    +    R         D     
Sbjct: 164 MLHPNAQPAWFVDMDNVGGARQA----------VEHLFRQGR--RRVATIAGPQDMGAGL 211

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKE--FTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVI 118
           + L    + +   G +V   +     F+E  G   ++  +DV            L+ + +
Sbjct: 212 ARLSGYQEAVRAAGGRVDPGLIAYGDFSEGSGTAAMRRLLDV---------CPELDAVFV 262

Query: 119 FSGDGCFTTLVAALQRKVKK----VTIVSTVLSDPSMASD 154
            S    F   + AL+   ++    V ++    +  +  ++
Sbjct: 263 ASDLMAF-GALRALREAGRRVPEDVAVIGFDDAPIARQAE 301


>gi|47104067|ref|YP_015496.1| hypothetical protein PBPRC0042 [Photobacterium profundum SS9]
 gi|46911631|emb|CAG17980.1| hypothetical protein [Photobacterium profundum SS9]
          Length = 317

 Score = 40.4 bits (93), Expect = 0.10,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 47/174 (27%), Gaps = 42/174 (24%)

Query: 7   KIALFIDGANLYASSKA--LGFDIDYRKLLKA-FRSRAIVIRAYYY-------------- 49
           +  ++IDG N Y           +D  KL +     R+ V  A  +              
Sbjct: 2   RTRIYIDGYNFYYGCLKGTPYKWLDLVKLFEEHIIPRSDVRNATLHDDVGIKYFTAEITN 61

Query: 50  --TTVVGDPEQQFSPLHPLLDWLHYNGFQV--------------------VAKVAKEFTE 87
                      Q S  H L                               + K  K+   
Sbjct: 62  KAAADPNSVNDQRSYHHALYLHSENWLKTFKGSYAVDKVEYPKVEHHEAGIEKEPKDCAR 121

Query: 88  NCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKK 138
               K  +   DV +A++A   +     LE ++  + D      +  ++   +K
Sbjct: 122 VKVWKLEEKQSDVNVAIEAVYDAVMDHTLEQIIFVTNDTDIVPALKKIREHNQK 175


>gi|208435041|ref|YP_002266707.1| hypothetical protein HPG27_1090 [Helicobacter pylori G27]
 gi|208432970|gb|ACI27841.1| hypothetical protein HPG27_1090 [Helicobacter pylori G27]
          Length = 295

 Score = 40.4 bits (93), Expect = 0.10,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 27/79 (34%), Gaps = 3/79 (3%)

Query: 84  EFTENCGRKRVKSSMDVELAVDA--FEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTI 141
             T        +  +D  L  D      +     +++FS D  F  ++  ++ +  K   
Sbjct: 174 IRTNQERLDLRQKGIDTLLVHDIAKICYTATSRCVLLFSKDTDFAPVLKEIREQGFK-IF 232

Query: 142 VSTVLSDPSMASDQLRRQA 160
           ++ +   P      L++  
Sbjct: 233 IARIKESPISVPSDLKKSC 251


>gi|134288743|ref|YP_001111040.1| gp9, Cpp15 [Burkholderia phage phiE202]
 gi|134131956|gb|ABO60704.1| gp9, Cpp15 [Burkholderia phage phiE202]
          Length = 251

 Score = 40.4 bits (93), Expect = 0.10,   Method: Composition-based stats.
 Identities = 7/50 (14%), Positives = 22/50 (44%), Gaps = 2/50 (4%)

Query: 94  VKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTI 141
            +  +D+ + +D    +  + ++ +V+ +GD  F       +R+     +
Sbjct: 161 RQKGVDMRIGLDVSSLAFKKQVDQIVLIAGDADFVPAAKQARREGIDFIL 210


>gi|330467792|ref|YP_004405535.1| hypothetical protein VAB18032_19165 [Verrucosispora maris
           AB-18-032]
 gi|328810763|gb|AEB44935.1| hypothetical protein VAB18032_19165 [Verrucosispora maris
           AB-18-032]
          Length = 187

 Score = 40.4 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 19/140 (13%), Positives = 41/140 (29%), Gaps = 11/140 (7%)

Query: 10  LFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDW 69
           L +DG N+ A+            +L+   + A   R         D  +Q       L+ 
Sbjct: 11  LIVDGENIDATLGN--------SVLERRPAPAERPRWERLREFARDTWRQPVKGLFFLNA 62

Query: 70  LHYNGFQVVAKVAKEFTENC---GRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFT 126
                     +                 +  +D+ +       +    ++++ S DG F 
Sbjct: 63  SGGALPMPFVRALLSMDYRPIPLAGSSDQKVVDIGIQRTLEAIARRSGNVMLASHDGDFL 122

Query: 127 TLVAALQRKVKKVTIVSTVL 146
             +  L    ++V +V    
Sbjct: 123 PQLGELLEGDRQVAVVGFKE 142


>gi|218768924|ref|YP_002343436.1| hypothetical protein NMA2192 [Neisseria meningitidis Z2491]
 gi|6900422|emb|CAB72032.1| hypothetical protein [Neisseria meningitidis]
 gi|121052932|emb|CAM09286.1| conserved hypothetical protein [Neisseria meningitidis Z2491]
 gi|254671541|emb|CBA09160.1| conserved hypothetical protein [Neisseria meningitidis alpha153]
 gi|254672832|emb|CBA07007.1| conserved hypothetical protein [Neisseria meningitidis alpha275]
 gi|308388512|gb|ADO30832.1| hypothetical protein NMBB_0327 [Neisseria meningitidis alpha710]
 gi|319411222|emb|CBY91629.1| conserved hypothetical protein [Neisseria meningitidis WUE 2594]
 gi|325131019|gb|EGC53746.1| hypothetical protein NMBOX9930304_0283 [Neisseria meningitidis
           OX99.30304]
 gi|325131640|gb|EGC54346.1| gp9, Cpp15 [Neisseria meningitidis M6190]
 gi|325137119|gb|EGC59715.1| gp9, Cpp15 [Neisseria meningitidis M0579]
 gi|325139012|gb|EGC61559.1| hypothetical protein NMBES14902_0278 [Neisseria meningitidis
           ES14902]
 gi|325199009|gb|ADY94465.1| hypothetical protein NMBG2136_1806 [Neisseria meningitidis G2136]
 gi|325202880|gb|ADY98334.1| hypothetical protein NMBM01240149_1792 [Neisseria meningitidis
           M01-240149]
 gi|325207321|gb|ADZ02773.1| conserved hypothetical protein [Neisseria meningitidis NZ-05/33]
          Length = 219

 Score = 40.4 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 10/70 (14%), Positives = 24/70 (34%), Gaps = 6/70 (8%)

Query: 94  VKSSMDVELAVDA--FEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151
            +  +D+ + +D       +  + +++FSGD  F       +R+     +        + 
Sbjct: 145 KQKGVDMRIGLDISSITLKKQADKIILFSGDSDFVPAAKLARREGIDFIL----DPMWNH 200

Query: 152 ASDQLRRQAD 161
               L    D
Sbjct: 201 VPPDLMEHID 210


>gi|326438113|gb|EGD83683.1| hypothetical protein PTSG_04288 [Salpingoeca sp. ATCC 50818]
          Length = 841

 Score = 40.4 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 25/178 (14%), Positives = 53/178 (29%), Gaps = 28/178 (15%)

Query: 10  LFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDW 69
           +F+D +N++  ++  G   D   +    R+   +I                       +W
Sbjct: 367 IFVDNSNIFIGAQLEGSVRDL-AVRVNIRALCEIIEDNMPCAFRAVAGTNPHSGRIWHEW 425

Query: 70  LHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC----- 124
            +        +   + ++      + + +D     +        + LV+ +GDG      
Sbjct: 426 ENN-----HYRTLLDRSDASMHNVIAAKID-----EVANSGANPQTLVLATGDGNEVEGN 475

Query: 125 --FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF------MDLAYLKNEIA 174
             F  L     +   +V + S   S     S + R   + F        L   K  I 
Sbjct: 476 ESFPRLAERAIQHGWRVRVWSWEQSL----SGKFRDLKERFNAYVTIHFLDPFKERIT 529


>gi|288947791|ref|YP_003445174.1| hypothetical protein Alvin_3251 [Allochromatium vinosum DSM 180]
 gi|288898307|gb|ADC64142.1| hypothetical protein Alvin_3251 [Allochromatium vinosum DSM 180]
          Length = 328

 Score = 40.4 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 51/157 (32%), Gaps = 23/157 (14%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRS--RAIVIRAYYYTTVVGDPEQQ 59
             P   +AL+IDG N Y +            LL + R      V R        G    +
Sbjct: 69  LQPPRSVALYIDGDNQYPAIAR--------DLLASVRQDLGLDVSRVVLAGNDHGHTVPR 120

Query: 60  FSPL--HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLV 117
           +        L        +V  K           +    ++ +EL  +     +G + +V
Sbjct: 121 WQAALAKEGLAEDRILALRVPRKP----------EAADLAVILELGANMERHRQGPDLVV 170

Query: 118 IFSGDGCFTTLVAALQRKVKKVTI-VSTVLSDPSMAS 153
           + S D        A++ +  +V +  +   + P+  S
Sbjct: 171 VVSRDEWLIGAAEAVRARGCRVWVAYAENDAVPAQTS 207


>gi|268317430|ref|YP_003291149.1| hypothetical protein Rmar_1878 [Rhodothermus marinus DSM 4252]
 gi|262334964|gb|ACY48761.1| protein of unknown function DUF88 [Rhodothermus marinus DSM 4252]
          Length = 320

 Score = 40.4 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 40/135 (29%), Gaps = 6/135 (4%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
            ALF+D  NLY  +       D    L    +  +     Y                   
Sbjct: 13  TALFVDYENLYQQATRYLKRTD---NLNGQLADLLYSLRRYLLARRRFRVVLGRAYADFE 69

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGC 124
            +      Q V                  S  ++L +DA +       ++  V+ SG+  
Sbjct: 70  QYDDGLAIQRVLAEQGIVPRMVPSSYEAPSRSLQLTIDALQTLQSHPEVQAFVVVSGNRS 129

Query: 125 FTTLVAALQRKVKKV 139
           +  L+  L+   +++
Sbjct: 130 YLPLLEHLRGHGRQI 144


>gi|254411600|ref|ZP_05025376.1| protein-glutamate methylesterase CheB [Microcoleus chthonoplastes
           PCC 7420]
 gi|196181322|gb|EDX76310.1| protein-glutamate methylesterase CheB [Microcoleus chthonoplastes
           PCC 7420]
          Length = 341

 Score = 40.4 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 22/148 (14%), Positives = 47/148 (31%), Gaps = 10/148 (6%)

Query: 32  KLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGR 91
           +L +    +  +  A  YT    +P   +         +  NG  V  +  +    +   
Sbjct: 198 RLAERLAQKCQIKVAEGYTLGQLEPGLAWIAPGDYHLIIERNGTGVHLRTHQ----DAPE 253

Query: 92  KRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTI----VSTVLS 147
              + ++DV     A         +++             +++   +V +     S V  
Sbjct: 254 NSCRPAVDVLFRSVAKLYGANTLAIILTGMGQDGRLGCECIRQVGGQVWVQDEATSVVWG 313

Query: 148 DPSMASDQLRRQADYFMDLAYLKNEIAR 175
            P M ++     AD  + L  +  EI R
Sbjct: 314 MPGMVANS--GLADRVIPLPDIAAEIIR 339


>gi|162455452|ref|YP_001617819.1| Alpha-amylase-family protein [Sorangium cellulosum 'So ce 56']
 gi|161166034|emb|CAN97339.1| Alpha-amylase-family protein [Sorangium cellulosum 'So ce 56']
          Length = 648

 Score = 40.4 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 56/162 (34%), Gaps = 22/162 (13%)

Query: 12  IDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGD-------PEQQFSPLH 64
            DG NL+A ++  G   D R+ + A     I +        +G            +    
Sbjct: 171 YDGVNLFAPTRLYGSPDDLRRFVDAAHRAGIAVILDVVYNHLGPDGNYLGQFSGDYFTDR 230

Query: 65  PLLDWLHYNGFQ-VVAKVAKE-FTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
              DW     F    ++  +E F  N G    +  +D  L +DA +      ++   S D
Sbjct: 231 HKTDWGAAINFDGPRSEAVREYFIANAGYWIDEFHLD-GLRLDATQ------NIYDGSKD 283

Query: 123 GCFTTLVAALQR--KVKKVTIVSTVLSDPSMASDQLRRQADY 162
                +   ++   K K+  +V+   S      + L R A+ 
Sbjct: 284 HILAAIARRVREAAKGKETFLVAENESQE----EWLIRAAER 321


>gi|217034222|ref|ZP_03439640.1| hypothetical protein HP9810_2g1 [Helicobacter pylori 98-10]
 gi|216943282|gb|EEC22744.1| hypothetical protein HP9810_2g1 [Helicobacter pylori 98-10]
          Length = 166

 Score = 40.4 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 3/75 (4%)

Query: 89  CGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVL 146
              K  +  +D+ LA D  +   ++    +++FS D  F  ++ A   K  +V I +   
Sbjct: 49  PHLKLRQKQIDMLLAHDITKLYCTKQGGCILLFSKDTDFMPVLEAAWEKEFEVFIANIQE 108

Query: 147 SDPSMASDQLRRQAD 161
             P++    LR+  D
Sbjct: 109 G-PNLVPPDLRKSCD 122


>gi|154483449|ref|ZP_02025897.1| hypothetical protein EUBVEN_01152 [Eubacterium ventriosum ATCC
           27560]
 gi|149735701|gb|EDM51587.1| hypothetical protein EUBVEN_01152 [Eubacterium ventriosum ATCC
           27560]
          Length = 222

 Score = 40.4 bits (93), Expect = 0.11,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 48/133 (36%), Gaps = 14/133 (10%)

Query: 42  IVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVE 101
                 +Y  +  +       L    D+      + + K+ K           K  +D +
Sbjct: 2   KPNVQEWYDELTEEY--NVKKLMFFGDFNGSAIEKELPKLEKITKNVVHTASTKDGVDKD 59

Query: 102 ----LAVDAF----EQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMAS 153
               + +DA      + +  +  VIF+GD  F   +  L+   KKV I           S
Sbjct: 60  FTDFIILDAIYREAAKKDSPDVFVIFTGDAHFNLAIKYLRELKKKVII----YGVKRSLS 115

Query: 154 DQLRRQADYFMDL 166
           ++L+  A+ ++++
Sbjct: 116 NKLKSSANSYVEM 128


>gi|227505008|ref|ZP_03935057.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940]
 gi|227198372|gb|EEI78420.1| conserved hypothetical protein [Corynebacterium striatum ATCC 6940]
          Length = 92

 Score = 40.4 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 11/81 (13%), Positives = 27/81 (33%), Gaps = 12/81 (14%)

Query: 100 VELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLR 157
           + + +D    +E   +  +++ SGD  F       +R      +        +  S+ L 
Sbjct: 1   MRIGLDIASLAERGLVNQIIMISGDSDFVPAAKHARRSGIDFIL----DPLWAPVSESLN 56

Query: 158 RQADYFMDLAYLKNEIARDPD 178
              D       ++  + + P 
Sbjct: 57  EHVD------GVRECVVKPPK 71


>gi|188527929|ref|YP_001910616.1| hypothetical protein HPSH_05910 [Helicobacter pylori Shi470]
 gi|188144169|gb|ACD48586.1| hypothetical protein HPSH_05910 [Helicobacter pylori Shi470]
          Length = 266

 Score = 40.4 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 3/70 (4%)

Query: 94  VKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151
            +  +D  LA D  +   ++    +++FS D  F  ++ A   K  +V I +     P++
Sbjct: 155 RQKQIDALLAHDITKLYCTKQGGCILLFSKDTDFVPVLEAAWEKGFEVFIANIQEG-PNL 213

Query: 152 ASDQLRRQAD 161
               LR+   
Sbjct: 214 VPPDLRKSCS 223


>gi|121635573|ref|YP_975818.1| hypothetical protein NMC1886 [Neisseria meningitidis FAM18]
 gi|161870771|ref|YP_001599944.1| hypothetical protein NMCC_1852 [Neisseria meningitidis 053442]
 gi|120867279|emb|CAM11050.1| conserved hypothetical protein [Neisseria meningitidis FAM18]
 gi|161596324|gb|ABX73984.1| conserved hypothetical protein [Neisseria meningitidis 053442]
          Length = 219

 Score = 40.4 bits (93), Expect = 0.12,   Method: Composition-based stats.
 Identities = 8/50 (16%), Positives = 21/50 (42%), Gaps = 2/50 (4%)

Query: 94  VKSSMDVELAVDA--FEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTI 141
            +  +D+ + +D       +  + +++FSGD  F       +R+     +
Sbjct: 145 KQKGVDMRIGLDISSITLKKQADKIILFSGDSDFVPAAKLARREGIDFIL 194


>gi|227500425|ref|ZP_03930487.1| conserved hypothetical protein [Anaerococcus tetradius ATCC 35098]
 gi|227217488|gb|EEI82807.1| conserved hypothetical protein [Anaerococcus tetradius ATCC 35098]
          Length = 224

 Score = 40.0 bits (92), Expect = 0.13,   Method: Composition-based stats.
 Identities = 7/47 (14%), Positives = 22/47 (46%), Gaps = 2/47 (4%)

Query: 92  KRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKV 136
              +  +D+++ +D    +  + ++ +V+ +GD  F       +R+ 
Sbjct: 143 TSKQKGVDMKIGIDIASLAYKKQVDKIVLIAGDSDFVPAAKLARREG 189


>gi|309811372|ref|ZP_07705159.1| conserved hypothetical protein [Dermacoccus sp. Ellin185]
 gi|308434679|gb|EFP58524.1| conserved hypothetical protein [Dermacoccus sp. Ellin185]
          Length = 186

 Score = 40.0 bits (92), Expect = 0.13,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 50/172 (29%), Gaps = 32/172 (18%)

Query: 10  LFIDGANLYASSKAL----GFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE---QQFSP 62
           L IDG N+ A+            D R         A      ++    G           
Sbjct: 8   LLIDGENIDATLGTSILGRRPHPDERPRWDRLLKFAQ---RQWHQDAKGLFFLAANGPEL 64

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVEL--AVDAFEQSEGLEHLVIFS 120
               +  L   G+Q +                +  +D+ +   +DA    +    +++ S
Sbjct: 65  PMAFIQALTALGYQPIPL---------SGAEGEKVVDMAIQKTLDALVTLQA--DVMLVS 113

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVL----SDPSMASDQLRRQADYFMDLAY 168
            DG F   +  L    +KV ++            + +  L      F DL +
Sbjct: 114 HDGDFLPQLEPLLGGSRKVGLIGFKEFRNAGFSPLEAQGL-----EFFDLEH 160


>gi|312128669|ref|YP_003993543.1| 1-phosphofructokinase [Caldicellulosiruptor hydrothermalis 108]
 gi|311778688|gb|ADQ08174.1| 1-phosphofructokinase [Caldicellulosiruptor hydrothermalis 108]
          Length = 315

 Score = 40.0 bits (92), Expect = 0.13,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 46/143 (32%), Gaps = 24/143 (16%)

Query: 11  FIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP----- 65
            ID           G  I+  K++K+       I   +      D   ++          
Sbjct: 32  LIDAG---------GKGINVSKVIKSL--GGKSIALGFLGNDNKDWFLKYLKNMQIDYDF 80

Query: 66  -LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG--- 121
             +D L     ++V    K +T+           D+ L  D  ++    + + + SG   
Sbjct: 81  IFVDGLTRTNIKIVETAQKVYTDLNQNGFEVKKKDINLLFDKIDRIAKTDDIFVLSGSLP 140

Query: 122 ---DGC-FTTLVAALQRKVKKVT 140
              D   +  L+  L+RK  KV 
Sbjct: 141 PGTDEDVYVELIRMLKRKGAKVI 163


>gi|304436308|ref|ZP_07396286.1| conserved hypothetical protein [Selenomonas sp. oral taxon 149 str.
           67H29BP]
 gi|304370713|gb|EFM24360.1| conserved hypothetical protein [Selenomonas sp. oral taxon 149 str.
           67H29BP]
          Length = 293

 Score = 40.0 bits (92), Expect = 0.13,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 45/167 (26%), Gaps = 30/167 (17%)

Query: 1   MFDP-REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
           M D   + +A+  D  N                          +  A  Y          
Sbjct: 1   MLDSSNDTVAILYDIENAPIEMLQY-----------------TIDIAQRYQPCRMIVVSD 43

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA-FEQSEGLEHLVI 118
           +        W       ++      F +       K+S+D  L   A     EG+    I
Sbjct: 44  WEAHPDQKRWDR-----LMESPDFTFRQISRTFLGKNSLDSALYDSAQILYQEGVRKYFI 98

Query: 119 FSGDGCFTTLVAALQRKV-KKVTIVSTVLSDPSMASDQLRRQADYFM 164
            + D  F  +  +L  +    +  + T       AS+ LR   + F 
Sbjct: 99  ITTDSDFVRIAESLNAEDPSYIIGIGTKQ-----ASEDLRNAYNEFF 140


>gi|332669784|ref|YP_004452792.1| hypothetical protein Celf_1270 [Cellulomonas fimi ATCC 484]
 gi|332338822|gb|AEE45405.1| hypothetical protein Celf_1270 [Cellulomonas fimi ATCC 484]
          Length = 191

 Score = 40.0 bits (92), Expect = 0.13,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 50/157 (31%), Gaps = 28/157 (17%)

Query: 10  LFIDGANLYASSKA--------LGFDIDYRKLLKAFRS-RAIVIRAYYYTTVVGDPEQQF 60
           L +DG N+ A+  +              + ++L   +      ++A ++           
Sbjct: 12  LLVDGENIDATLGSSILGGRPTPEQRPRWERVLGFAQQAWGQPVKALFFLNASNG----- 66

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S     +  L   GF  +    + +         +  +DV +       +     +++ S
Sbjct: 67  SLPMSFVQALLAIGFTPIPLSGESY---------EKVVDVGIKRTLEAIAARGGDVLLAS 117

Query: 121 GDGCFTTLVAALQRKV-KKVTIVSTVLSDPSMASDQL 156
            DG F   V  L     ++V +++         S  L
Sbjct: 118 HDGDFAPEVETLVDAGDRRVGLLAF----REFTSTAL 150


>gi|169334288|ref|ZP_02861481.1| hypothetical protein ANASTE_00686 [Anaerofustis stercorihominis DSM
           17244]
 gi|169259005|gb|EDS72971.1| hypothetical protein ANASTE_00686 [Anaerofustis stercorihominis DSM
           17244]
          Length = 233

 Score = 40.0 bits (92), Expect = 0.13,   Method: Composition-based stats.
 Identities = 8/52 (15%), Positives = 22/52 (42%), Gaps = 2/52 (3%)

Query: 87  ENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKV 136
            +      +  +D+++ VD    +  + +  +++ SGD  F       +R+ 
Sbjct: 139 NDFFIDIKQKGVDMKIGVDIASLAYKKQVSQIILISGDSDFVPAAKLARREG 190


>gi|145301490|ref|YP_001144329.1| hypothetical protein ASA_P5G111 [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142856372|gb|ABO92581.1| conserved hypothetical protein [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 240

 Score = 40.0 bits (92), Expect = 0.14,   Method: Composition-based stats.
 Identities = 15/110 (13%), Positives = 37/110 (33%), Gaps = 8/110 (7%)

Query: 31  RKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCG 90
           ++L +A   +  V R   + +      +         D +H +      +  +   E   
Sbjct: 89  KELHQALVKQPYVARRMGFLS------KNDRQWKIADDRMHKSLLAGRIQANQIPAEKIV 142

Query: 91  RKRVKSSMDVELAVDA--FEQSEGLEHLVIFSGDGCFTTLVAALQRKVKK 138
               +  +D++L +D       + +  +V+ SGD  F       + +   
Sbjct: 143 LHAPQKGVDMKLGLDIATLTLKKQVNKIVLISGDSDFVPAAKLARAEGVH 192


>gi|103485875|ref|YP_615436.1| hypothetical protein Sala_0380 [Sphingopyxis alaskensis RB2256]
 gi|98975952|gb|ABF52103.1| hypothetical protein Sala_0380 [Sphingopyxis alaskensis RB2256]
          Length = 64

 Score = 40.0 bits (92), Expect = 0.15,   Method: Composition-based stats.
 Identities = 6/54 (11%), Positives = 14/54 (25%), Gaps = 8/54 (14%)

Query: 132 LQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI---ARDPDEDKK 182
           ++ +   V              +  R+    F+    L  E         +D +
Sbjct: 3   IREQGIDVYGFGEQK-----TPESFRQACRRFIYTENLLPEAPTSDEPSRQDAR 51


>gi|108563509|ref|YP_627825.1| hypothetical protein HPAG1_1084 [Helicobacter pylori HPAG1]
 gi|107837282|gb|ABF85151.1| hypothetical protein HPAG1_1084 [Helicobacter pylori HPAG1]
          Length = 119

 Score = 40.0 bits (92), Expect = 0.15,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 31/70 (44%), Gaps = 3/70 (4%)

Query: 94  VKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151
            +  +D  LA D  +   ++    +++FS D  F  ++ A   K  +V  ++ +   P+ 
Sbjct: 8   RQKQVDALLAHDITKLYCTKQGGCILLFSRDTDFVPVLEAAWEKGFEV-FIANIQESPNS 66

Query: 152 ASDQLRRQAD 161
               L++  +
Sbjct: 67  VPSDLKKSCN 76


>gi|322434519|ref|YP_004216731.1| multi-sensor signal transduction histidine kinase [Acidobacterium
           sp. MP5ACTX9]
 gi|321162246|gb|ADW67951.1| multi-sensor signal transduction histidine kinase [Acidobacterium
           sp. MP5ACTX9]
          Length = 793

 Score = 40.0 bits (92), Expect = 0.15,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 3/74 (4%)

Query: 103 AVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKK-VTIVSTVLSDPSMASD--QLRRQ 159
             D    ++  +  +  SG+  F+   AA+ +K    VT+V  +     M+++   LR  
Sbjct: 248 VTDILALAQRSDEPMYTSGESDFSLGTAAVIKKGSSAVTVVVGLPLPAGMSANMTSLRTA 307

Query: 160 ADYFMDLAYLKNEI 173
           AD +  LA  + E+
Sbjct: 308 ADAYWRLARSRREV 321


>gi|167838348|ref|ZP_02465207.1| hypothetical protein Bpse38_17705 [Burkholderia thailandensis
           MSMB43]
          Length = 172

 Score = 40.0 bits (92), Expect = 0.15,   Method: Composition-based stats.
 Identities = 8/58 (13%), Positives = 24/58 (41%), Gaps = 2/58 (3%)

Query: 86  TENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKVTI 141
            ++      +  +D+ + VD    +  + ++ +V+ +GD  F       +R+     +
Sbjct: 69  PDDVVVDVRQKGVDMRIGVDVSSLAFKKQVDQIVLVAGDADFVPAAKQARREGIDFIL 126


>gi|259505747|ref|ZP_05748649.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
 gi|259166655|gb|EEW51209.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
          Length = 228

 Score = 40.0 bits (92), Expect = 0.15,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 37/120 (30%), Gaps = 24/120 (20%)

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG------LEHLV 117
            P ++ L   GF V AK              K + D ++  D             L  +V
Sbjct: 92  RPWVEALRNVGFAVFAKP-------------KLTEDSDVDEDMLAHIRRRFEEGVLRGVV 138

Query: 118 IFSGDG-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
           + S DG  F  L+  L       T++          + +    A  F+DL  +       
Sbjct: 139 VASADGQNFRELLEELTGDGIPATVIGFHEHASWAVAHE----AIEFVDLEEIAGVFREP 194


>gi|25029253|ref|NP_739307.1| hypothetical protein CE2697 [Corynebacterium efficiens YS-314]
 gi|23494541|dbj|BAC19507.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
          Length = 234

 Score = 40.0 bits (92), Expect = 0.15,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 37/120 (30%), Gaps = 24/120 (20%)

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG------LEHLV 117
            P ++ L   GF V AK              K + D ++  D             L  +V
Sbjct: 98  RPWVEALRNVGFAVFAKP-------------KLTEDSDVDEDMLAHIRRRFEEGVLRGVV 144

Query: 118 IFSGDG-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
           + S DG  F  L+  L       T++          + +    A  F+DL  +       
Sbjct: 145 VASADGQNFRELLEELTGDGIPATVIGFHEHASWAVAHE----AIEFVDLEEIAGVFREP 200


>gi|163781959|ref|ZP_02176959.1| oxaloacetate decarboxylase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159883179|gb|EDP76683.1| oxaloacetate decarboxylase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 441

 Score = 40.0 bits (92), Expect = 0.16,   Method: Composition-based stats.
 Identities = 24/157 (15%), Positives = 40/157 (25%), Gaps = 26/157 (16%)

Query: 14  GANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ------------FS 61
           G N+ A  K     I + +LL        V R  + T    D                 +
Sbjct: 201 GQNVTAWGKDFERPIPFSELLYEVSKVDGVERIRFTTGHPKDLTDDTVEAMADIPQVCNA 260

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
              P           +  K  KEF  +   +  ++  D+ L+ D                
Sbjct: 261 LHLPFQAGSDRILELMDRKYTKEFYLDRINRLKEAVEDIALSTDII-------VGFPTET 313

Query: 122 DGCFTTLVAALQRKVKKVT---IVSTVLSDPSMASDQ 155
           D  F   +  ++     V    + S   S        
Sbjct: 314 DEDFEHTLDVVRE----VEFEQVFSFKYSPRPGTPAA 346


>gi|25026602|ref|NP_736656.1| hypothetical protein CE0046 [Corynebacterium efficiens YS-314]
 gi|259508265|ref|ZP_05751165.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
 gi|23491881|dbj|BAC16856.1| hypothetical protein [Corynebacterium efficiens YS-314]
 gi|259164153|gb|EEW48707.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
          Length = 160

 Score = 40.0 bits (92), Expect = 0.16,   Method: Composition-based stats.
 Identities = 21/117 (17%), Positives = 37/117 (31%), Gaps = 8/117 (6%)

Query: 56  PEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKS--SMDVELA--VDAFEQSE 111
              Q +P         ++ + V A   ++                D+ L   + A   ++
Sbjct: 35  HVTQAAPHDQFTVSTSHHNYTVAAFALRDIRSVHLLPPRSGPDGADMALIDGIAASRLNK 94

Query: 112 GLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
            ++ + I SGD  F   +  L       T VS     P   S  + R A   + L  
Sbjct: 95  NVDQICIGSGDHIFAFALTRLNNLGFHTTAVS----RPEACSLHITRAASRVLYLPD 147


>gi|190015992|ref|YP_001965200.1| hypothetical protein PNSL1.097 [Rhodococcus sp. NS1]
 gi|114796832|gb|ABI79425.1| hypothetical protein PNSL1.097 [Rhodococcus sp. NS1]
          Length = 174

 Score = 39.6 bits (91), Expect = 0.16,   Method: Composition-based stats.
 Identities = 24/157 (15%), Positives = 41/157 (26%), Gaps = 24/157 (15%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
           R +    ID  NL      LG  ID   +   +     +    +      D         
Sbjct: 18  RPRTLHLIDLENL------LGGRIDPHAVATLWNHYRELTAMRW-----DDHVIVAVSRR 66

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
             LD        V   V     +      +        A+D    +     +++ +GD  
Sbjct: 67  HALDTFTALPATVQRVVGPNSPDGADHALLD-------AIDIDWAARRFGQVIVATGDHI 119

Query: 125 FTTLVAALQRKVKK-VTIVSTVLSDPSMASDQLRRQA 160
           FT     L     + V ++          +  L  Q 
Sbjct: 120 FTDTARRLAATGLQLVQVLGLGY-----TATDLYHQC 151


>gi|298345622|ref|YP_003718309.1| hypothetical protein HMPREF0573_10496 [Mobiluncus curtisii ATCC
           43063]
 gi|304390689|ref|ZP_07372642.1| conserved hypothetical protein [Mobiluncus curtisii subsp. curtisii
           ATCC 35241]
 gi|315654221|ref|ZP_07907129.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333]
 gi|315657881|ref|ZP_07910761.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii
           ATCC 35242]
 gi|298235683|gb|ADI66815.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 43063]
 gi|304326445|gb|EFL93690.1| conserved hypothetical protein [Mobiluncus curtisii subsp. curtisii
           ATCC 35241]
 gi|315491256|gb|EFU80873.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333]
 gi|315491678|gb|EFU81289.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii
           ATCC 35242]
          Length = 191

 Score = 39.6 bits (91), Expect = 0.17,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 55/154 (35%), Gaps = 21/154 (13%)

Query: 10  LFIDGANLYASSK--ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           L +DG N+ A+     LG   D  +       R    R   Y     +     +     L
Sbjct: 13  LLVDGENIDATLGLSVLGRRPDPDE-------RPRWDRVRDYV---SETFPGQTKGLFFL 62

Query: 68  DWLHYNGFQVVAKVAKEFTENC--GRKRVKSSMDVEL--AVDAFEQSEGLEHLVIFSGDG 123
           +   +     V  +     +      +R +  +DV +   ++A +  +   ++V+ S DG
Sbjct: 63  NASAHMPMTFVQALLAMNYQPIPLASERDEKVVDVGIQRTLEAID-KQEYGNVVLVSHDG 121

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLR 157
            F   + +L R    VT+V          S +LR
Sbjct: 122 DFEPQLRSLLRNDHDVTVVGF----EEFLSGELR 151


>gi|21325639|dbj|BAC00260.1| Hypothetical protein [Corynebacterium glutamicum ATCC 13032]
          Length = 235

 Score = 39.6 bits (91), Expect = 0.17,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 35/120 (29%), Gaps = 24/120 (20%)

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG------LEHLV 117
            P ++ L   GF V AK              K   D ++  D  +          L  ++
Sbjct: 99  RPWVEALRNVGFAVFAKP-------------KIGEDSDVDPDMIDHIRRRYEEGVLRGVI 145

Query: 118 IFSGDG-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
           + S DG  F   +  L  +    T++          +         F+DL  +       
Sbjct: 146 VASADGQNFRETLEELVAEGIPATVIGFHEHASWAVAHDTI----EFVDLEEIPGVFREP 201


>gi|302692524|ref|XP_003035941.1| hypothetical protein SCHCODRAFT_105543 [Schizophyllum commune H4-8]
 gi|300109637|gb|EFJ01039.1| hypothetical protein SCHCODRAFT_105543 [Schizophyllum commune H4-8]
          Length = 598

 Score = 39.6 bits (91), Expect = 0.17,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 52/183 (28%), Gaps = 37/183 (20%)

Query: 10  LFIDG---ANLYASSKALGFDIDYRKLLKAFRSRAIVIRAY-YYTTVVGDPEQQFSPLHP 65
           L +D     N   ++   G   D  + ++       ++R +  Y  V     QQ +    
Sbjct: 22  LVVDALSIENCQYTAGRSG--FDIARNIEEQARGHGLLRTFNAYLDV-----QQCATPAT 74

Query: 66  LLDWLHYNGFQVVAKVAKEFTE----------------NCGRKRVKSSMDVE----LAVD 105
           L   L  +G  +V                               +  + D      L  D
Sbjct: 75  LRSELQSSGVTLVDCPHNGQKNVVDLMLLSALCAFAPLPHALTIILINFDSLVSLVLVAD 134

Query: 106 AFEQS---EGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162
               +        +V+ SGD  F    + L+++   V +V      P      L  Q   
Sbjct: 135 MLVFALREPAPSTVVLVSGDRDFAYTASILRQRGINVVLVCHARPGPH---RSLAAQVSE 191

Query: 163 FMD 165
            +D
Sbjct: 192 CVD 194


>gi|210135304|ref|YP_002301743.1| hypothetical protein HPP12_1111 [Helicobacter pylori P12]
 gi|210133272|gb|ACJ08263.1| hypothetical protein HPP12_1111 [Helicobacter pylori P12]
          Length = 295

 Score = 39.6 bits (91), Expect = 0.17,   Method: Composition-based stats.
 Identities = 26/223 (11%), Positives = 60/223 (26%), Gaps = 68/223 (30%)

Query: 3   DPREKI--ALFIDGANLYASSKALG--------FDIDYRK-------LLKAFRSRAIVIR 45
           +   KI   +F+D  NL A  +A+            ++         +         + R
Sbjct: 32  ENMGKIETTIFVDWENLLADLRAIQETDERFKESHFNFNNPEQLLALIRSFLEPEEELKR 91

Query: 46  AYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKR------------ 93
            Y+Y +      +    +    +       +   K  +E     G  +            
Sbjct: 92  IYFYVS--EPFTEAEPRIKGKKNEKLEEHKEKNPKDYEERVNKSGIIQSFNHNIAQQNQV 149

Query: 94  ----------------------------------VKSSMDVELAVDAFEQ--SEGLEHLV 117
                                              +  +D  LA D  +   ++    ++
Sbjct: 150 KLRVGRVMFEFVYEFEGKEVYGLEAKIPIPQLKSRQKQVDALLAHDITKLYCTKQGGCIL 209

Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160
           +FS D  F  ++  +Q +  K   ++ +   P      L++  
Sbjct: 210 LFSRDTDFVPVLEEVQDQHSK-AFIANIKKSPISVPSDLKKSC 251


>gi|66825719|ref|XP_646214.1| hypothetical protein DDB_G0269710 [Dictyostelium discoideum AX4]
 gi|60474268|gb|EAL72205.1| hypothetical protein DDB_G0269710 [Dictyostelium discoideum AX4]
          Length = 1442

 Score = 39.6 bits (91), Expect = 0.18,   Method: Composition-based stats.
 Identities = 26/177 (14%), Positives = 59/177 (33%), Gaps = 27/177 (15%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           + +F D  N    S   G  +    +      R ++     +  +    ++  S L    
Sbjct: 7   VNVFWDLENCAVPSNLKGIHV-VNAIRSFALQRGVLKNISAFANLKLIKDELRSNLQ--- 62

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGC 124
                 G  +              +   ++ D+ + V+  +     +    +V+ SGD  
Sbjct: 63  ----ECGVLLHDV----------TRNKSNASDIAILVEILKLVIDNKPPHCIVLISGDRD 108

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD-YFMDLAYLKNEIARDPDED 180
           F+ ++  L  +  +V ++       + ASD L+  A   +  ++ LK  I       
Sbjct: 109 FSNVLNTLTFRRYQVFLI-----HSTHASDVLKYSATASYEWISLLKGTIKAPNSPP 160


>gi|19554056|ref|NP_602058.1| hypothetical protein NCgl2768 [Corynebacterium glutamicum ATCC
           13032]
 gi|62391705|ref|YP_227107.1| hypothetical protein cg3173 [Corynebacterium glutamicum ATCC 13032]
 gi|145296854|ref|YP_001139675.1| hypothetical protein cgR_2754 [Corynebacterium glutamicum R]
 gi|41327047|emb|CAF20891.1| conserved hypothetical protein [Corynebacterium glutamicum ATCC
           13032]
 gi|140846774|dbj|BAF55773.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 228

 Score = 39.6 bits (91), Expect = 0.18,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 35/120 (29%), Gaps = 24/120 (20%)

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG------LEHLV 117
            P ++ L   GF V AK              K   D ++  D  +          L  ++
Sbjct: 92  RPWVEALRNVGFAVFAKP-------------KIGEDSDVDPDMIDHIRRRYEEGVLRGVI 138

Query: 118 IFSGDG-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
           + S DG  F   +  L  +    T++          +         F+DL  +       
Sbjct: 139 VASADGQNFRETLEELVAEGIPATVIGFHEHASWAVAHDTI----EFVDLEEIPGVFREP 194


>gi|302808057|ref|XP_002985723.1| hypothetical protein SELMODRAFT_47664 [Selaginella moellendorffii]
 gi|300146632|gb|EFJ13301.1| hypothetical protein SELMODRAFT_47664 [Selaginella moellendorffii]
          Length = 152

 Score = 39.6 bits (91), Expect = 0.18,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 49/164 (29%), Gaps = 24/164 (14%)

Query: 7   KIALFIDGAN--LYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
           KI ++ D  N  +     A    ++    L++   +  V                     
Sbjct: 1   KIGVWWDFENCNVPYGIDAHRVGLNIVSGLRSSGFKGPVSI--------SGYGDMLQLSR 52

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSG 121
            + + L   G ++            G K  + S D  L +D    +       HL + SG
Sbjct: 53  SVQESLSATGIRLHHVP-------SGGKESE-SSDRALLMDLILWTIENPPPAHLFLISG 104

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD 165
           D  F+T +  L+ +   V +        +  S  L   A     
Sbjct: 105 DRDFSTALHKLRMRNYNVLLAC---PAGAYISPSLLGAASRVWY 145


>gi|295093641|emb|CBK82732.1| Protein of unknown function DUF88. [Coprococcus sp. ART55/1]
          Length = 299

 Score = 39.6 bits (91), Expect = 0.18,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 53/168 (31%), Gaps = 33/168 (19%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           + AL+ID  ++ A +           + +       ++    + +   D     S     
Sbjct: 2   RAALYIDCDSIEAKA--------VPVIYEDIIRTDKLVICKMFNSDKDDDSFMESAGRFR 53

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGC 124
           +    +  ++V + +                  V LAV+    +     E + I +GD  
Sbjct: 54  IQDCMHGEYKVSSAM------------------VALAVEVMADAALSKPERIYIATGDSL 95

Query: 125 FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
              L+  L+    +V +     +D       L   A  +M +  L  E
Sbjct: 96  TVPLLNKLRLTDIEVVVAGPCDADKI-----LVNSAQRYMYIDVLAGE 138


>gi|57505164|ref|ZP_00371104.1| conserved hypothetical protein [Campylobacter coli RM2228]
 gi|57019057|gb|EAL55779.1| conserved hypothetical protein [Campylobacter coli RM2228]
          Length = 180

 Score = 39.6 bits (91), Expect = 0.19,   Method: Composition-based stats.
 Identities = 7/50 (14%), Positives = 22/50 (44%), Gaps = 2/50 (4%)

Query: 92  KRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKVKKV 139
              +  +D+++ +D    +    +E +++ + D  F   V   +++   V
Sbjct: 96  DIKQKGVDMKVGLDIATLANKHQVEKIILITSDSDFVPAVKHARKEGLIV 145


>gi|227876363|ref|ZP_03994475.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35243]
 gi|269975928|ref|ZP_06182932.1| conserved hypothetical protein [Mobiluncus mulieris 28-1]
 gi|306817255|ref|ZP_07451001.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239]
 gi|307700454|ref|ZP_07637493.1| conserved hypothetical protein [Mobiluncus mulieris FB024-16]
 gi|227842904|gb|EEJ53101.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35243]
 gi|269935756|gb|EEZ92286.1| conserved hypothetical protein [Mobiluncus mulieris 28-1]
 gi|304649935|gb|EFM47214.1| conserved hypothetical protein [Mobiluncus mulieris ATCC 35239]
 gi|307614439|gb|EFN93669.1| conserved hypothetical protein [Mobiluncus mulieris FB024-16]
          Length = 191

 Score = 39.6 bits (91), Expect = 0.20,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 52/164 (31%), Gaps = 18/164 (10%)

Query: 10  LFIDGANLYASSK--ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           L +DG N+ A+     L    D  +       R    R   Y     +     +     L
Sbjct: 13  LLVDGENIDATLGLSVLQRRPDPDE-------RPRWDRVRDYVA---ENNAGETKALFFL 62

Query: 68  DWLHYNGFQVVAKVA--KEFTENCGRKRVKSSMDVEL--AVDAFEQSEGLEHLVIFSGDG 123
           +   +     V  +            +  +  +DV +   +DA   + G  ++V+ S DG
Sbjct: 63  NATAHMPMTFVQALLAMNYLPIPLSSEGTEQVVDVGIQRTLDAI-AARGEGNIVLVSHDG 121

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
            F   +  L R   +V +V             L  Q    +DL 
Sbjct: 122 DFEPQLQTLLRNGHRVAVVGFDEFLSGEL-RSLEEQGLKIIDLE 164


>gi|227547784|ref|ZP_03977833.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM
           44291]
 gi|227080150|gb|EEI18113.1| conserved hypothetical protein [Corynebacterium lipophiloflavum DSM
           44291]
          Length = 238

 Score = 39.6 bits (91), Expect = 0.20,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 41/115 (35%), Gaps = 13/115 (11%)

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
            P ++ L   GF V AK   +   +  +  +         ++       L  LV+ S DG
Sbjct: 92  RPWVEALRNVGFAVFAKPKSDDDSDVDQDMLA-------HIERRRDEGVLRGLVVASADG 144

Query: 124 -CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
             F   +  L  +   VT++          S++       F+DL  +     R+P
Sbjct: 145 QNFMPAIEDLLNEGIPVTVLGFHEHASWAVSNEEID----FVDLEDIPGVF-REP 194


>gi|317178554|dbj|BAJ56342.1| hypothetical protein HPF30_0245 [Helicobacter pylori F30]
          Length = 213

 Score = 39.6 bits (91), Expect = 0.21,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 47/129 (36%), Gaps = 5/129 (3%)

Query: 35  KAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRV 94
           +   +++ +I+A+       +  +             +   +V    AK        K  
Sbjct: 45  EKRVNKSGIIQAFNRKIAQQNQVKLRVGRVMFEFVYEFEDKEVHNIEAKIPI--PHLKLR 102

Query: 95  KSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMA 152
           +  +D  L  D  +   ++    +++FS D  F  ++ A   K  +V I +     P++ 
Sbjct: 103 QKQIDALLVHDITKLYCTKQGGCILLFSKDTDFVPVLEAAWEKDFEVFIANIQEG-PNLV 161

Query: 153 SDQLRRQAD 161
              LR+  D
Sbjct: 162 PPDLRKSCD 170


>gi|311742102|ref|ZP_07715912.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272]
 gi|311314595|gb|EFQ84502.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272]
          Length = 192

 Score = 39.2 bits (90), Expect = 0.21,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 46/145 (31%), Gaps = 21/145 (14%)

Query: 10  LFIDGANLYASSKA--LGFDIDY------RKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
           L +DG N+ A+     LG            +LL+             +   V   E    
Sbjct: 14  LLVDGENIDATLGQSILGRRPHPTERPRWDRLLRFAEEHWDQQVKGLFFLAVTAGELP-- 71

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
                +  L   GF+ V                +  +DV +     E +     +V+ S 
Sbjct: 72  --MGFVQALTAIGFRPVPL---------AGAPEQKVVDVAIQRTLEEIARREADVVLASN 120

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVL 146
           DG F   + AL +  ++V ++    
Sbjct: 121 DGDFLPQIEALVQGSRRVAMLGFEE 145


>gi|319954470|ref|YP_004165737.1| d-lactate dehydrogenase [Cellulophaga algicola DSM 14237]
 gi|319423130|gb|ADV50239.1| D-lactate dehydrogenase [Cellulophaga algicola DSM 14237]
          Length = 331

 Score = 39.2 bits (90), Expect = 0.22,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 20/50 (40%)

Query: 89  CGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKK 138
              K      D  L++D  + ++G + + IF+ D     ++  L     K
Sbjct: 20  NNDKHTLKMFDTYLSLDTVDLAKGYDAICIFTEDNAAAPILDRLYELGIK 69


>gi|308050612|ref|YP_003914178.1| NAD(+) kinase [Ferrimonas balearica DSM 9799]
 gi|307632802|gb|ADN77104.1| NAD(+) kinase [Ferrimonas balearica DSM 9799]
          Length = 309

 Score = 39.2 bits (90), Expect = 0.22,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 27/90 (30%), Gaps = 9/90 (10%)

Query: 53  VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG 112
             D +     L  L  WL   G++V+ +          R       D    VD     + 
Sbjct: 28  KPDHDGANQTLTRLFYWLRKQGYEVLLE---------QRVAKHLGCDKAERVDLTTLGQR 78

Query: 113 LEHLVIFSGDGCFTTLVAALQRKVKKVTIV 142
            +  ++  GDG        L R    V  V
Sbjct: 79  CDLAIVVGGDGNMLGAARVLSRFDVAVIGV 108


>gi|119715267|ref|YP_922232.1| hypothetical protein Noca_1026 [Nocardioides sp. JS614]
 gi|119535928|gb|ABL80545.1| hypothetical protein Noca_1026 [Nocardioides sp. JS614]
          Length = 207

 Score = 39.2 bits (90), Expect = 0.25,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 4/56 (7%)

Query: 106 AFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
               ++  + +VI SGDG F  L    +R+   V  V+ +       S  L R A 
Sbjct: 103 LTHAADRFDRVVIASGDGMFEDLAIEARRRGLHVHQVTGL----GRCSAALSRAAT 154


>gi|302757247|ref|XP_002962047.1| hypothetical protein SELMODRAFT_227265 [Selaginella moellendorffii]
 gi|300170706|gb|EFJ37307.1| hypothetical protein SELMODRAFT_227265 [Selaginella moellendorffii]
          Length = 546

 Score = 39.2 bits (90), Expect = 0.25,   Method: Composition-based stats.
 Identities = 18/144 (12%), Positives = 43/144 (29%), Gaps = 31/144 (21%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL- 66
           +A+  D  N       +  +++  ++         V  A    +      + FS      
Sbjct: 23  VAILWDIENC-----TVPGEVNPEEVA------GNVRMALRMHSSTRGAVKMFSAYGDFN 71

Query: 67  ------LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLV 117
                  +     G  ++                K++ D  + VD F  +        ++
Sbjct: 72  HFPRKVREGCQRTGVNLIDVP----------NGRKNASDKAILVDMFLFALDNRPPCTIL 121

Query: 118 IFSGDGCFTTLVAALQRKVKKVTI 141
           + +GD  F   +  L ++   V +
Sbjct: 122 LITGDVDFAPALHKLGQRDYTVVL 145


>gi|302775250|ref|XP_002971042.1| hypothetical protein SELMODRAFT_270892 [Selaginella moellendorffii]
 gi|300161024|gb|EFJ27640.1| hypothetical protein SELMODRAFT_270892 [Selaginella moellendorffii]
          Length = 550

 Score = 39.2 bits (90), Expect = 0.26,   Method: Composition-based stats.
 Identities = 18/144 (12%), Positives = 43/144 (29%), Gaps = 31/144 (21%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL- 66
           +A+  D  N       +  +++  ++         V  A    +      + FS      
Sbjct: 23  VAILWDIENC-----TVPGEVNPEEVA------GNVRMALRMHSSTRGAVKMFSAYGDFN 71

Query: 67  ------LDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLV 117
                  +     G  ++                K++ D  + VD F  +        ++
Sbjct: 72  HFPRKVREGCQRTGVNLIDVP----------NGRKNASDKAILVDMFLFALDNRPPCTIL 121

Query: 118 IFSGDGCFTTLVAALQRKVKKVTI 141
           + +GD  F   +  L ++   V +
Sbjct: 122 LITGDVDFAPALHKLGQRDYTVVL 145


>gi|302692512|ref|XP_003035935.1| hypothetical protein SCHCODRAFT_105536 [Schizophyllum commune H4-8]
 gi|300109631|gb|EFJ01033.1| hypothetical protein SCHCODRAFT_105536 [Schizophyllum commune H4-8]
          Length = 701

 Score = 39.2 bits (90), Expect = 0.27,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 50/151 (33%), Gaps = 20/151 (13%)

Query: 15  ANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNG 74
            N + +    GFDI  + + +       V     Y        Q  +  + L   L  +G
Sbjct: 7   ENCHFTGGCSGFDI-AKNIERVALPHGSVTAFNAYLD-----PQLCTISNNLRSELQSSG 60

Query: 75  FQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGCFTTLVAA 131
             ++                K+++D  L  D    +        LV+ SGD  F    A 
Sbjct: 61  VALIDCP---------HNGQKNAVDQMLQTDILLFALDNPAPATLVLISGDRDFAYTAAV 111

Query: 132 LQRKVKKVTIVSTVLSDPSMASDQLRRQADY 162
           L+R+   V ++      P  +   L + A +
Sbjct: 112 LRRRHYNVILICRSQPGPHRS--LLSQVASH 140


>gi|319948099|ref|ZP_08022264.1| hypothetical protein ES5_02124 [Dietzia cinnamea P4]
 gi|319438233|gb|EFV93188.1| hypothetical protein ES5_02124 [Dietzia cinnamea P4]
          Length = 177

 Score = 38.8 bits (89), Expect = 0.28,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 7/62 (11%)

Query: 104 VDAFEQ---SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160
           +D       ++  + +V+ SGDG FT  VA L     KVT+V+      +  + +L+  A
Sbjct: 105 LDVLNYENIADRFDEVVLVSGDGIFTETVATLGGHGVKVTVVA----HRTSLAKRLQMAA 160

Query: 161 DY 162
             
Sbjct: 161 SQ 162


>gi|332994847|gb|AEF04902.1| hypothetical protein ambt_16985 [Alteromonas sp. SN2]
          Length = 273

 Score = 38.8 bits (89), Expect = 0.28,   Method: Composition-based stats.
 Identities = 10/113 (8%), Positives = 29/113 (25%), Gaps = 10/113 (8%)

Query: 31  RKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCG 90
           ++L  + +    +       +              +L         V         E+  
Sbjct: 123 QELHSSLKKSRKLALRMGKLSKAKRWIMDERAQKSILTGEKDINELV--------PEDFY 174

Query: 91  RKRVKSSMDVELAVDA--FEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTI 141
               +  +D  + +D       +  + +V+ + D  F       +     V +
Sbjct: 175 LDVKQKGVDTRIGIDITTVTLRKFADTIVLIASDADFVPAAKLARTHGVDVVL 227


>gi|172355523|ref|NP_001116497.1| intraflagellar transport 140 homolog [Xenopus (Silurana) tropicalis]
 gi|160774080|gb|AAI55382.1| ift140 protein [Xenopus (Silurana) tropicalis]
          Length = 1461

 Score = 38.8 bits (89), Expect = 0.29,   Method: Composition-based stats.
 Identities = 17/108 (15%), Positives = 31/108 (28%), Gaps = 7/108 (6%)

Query: 15   ANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNG 74
            +NL A+ K      DY  L++       + RA       G+    +              
Sbjct: 969  SNLDAALKYYEMAQDYLSLVRVHCFLGNIQRAAEIANETGNGAASYHLARHYESQEEVKQ 1028

Query: 75   FQVVAKVAKEFTENCGRKRVKSSMD--VELAV-----DAFEQSEGLEH 115
                   A+ +       +  +  D  + LA+     D  E +   E 
Sbjct: 1029 AVHFYTRAQAYNNGIRLCKENNMDDQLMNLALLSSPEDMMEAARYYEE 1076


>gi|229819338|ref|YP_002880864.1| hypothetical protein Bcav_0841 [Beutenbergia cavernae DSM 12333]
 gi|229565251|gb|ACQ79102.1| conserved hypothetical protein [Beutenbergia cavernae DSM 12333]
          Length = 197

 Score = 38.8 bits (89), Expect = 0.29,   Method: Composition-based stats.
 Identities = 23/169 (13%), Positives = 48/169 (28%), Gaps = 30/169 (17%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGD-------PEQQ 59
           +  + +DG N+ A+   LG  +   +     R R   I A+  T                
Sbjct: 16  RTYVLVDGENIDAT---LGMSVLGHRPAPEERPRWDRITAFAETLWDQPVTALFFLNASN 72

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIF 119
                  +  L   G+  +                +  +D+ +       ++    +++ 
Sbjct: 73  GQMPMSFVQALLALGYHPIPL---------AGGPGEKVVDIGIQRTLAALTDRPSDVLLA 123

Query: 120 SGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
           S DG F   V  L     +V ++            +       F +L  
Sbjct: 124 SHDGDFLPQVEDLLTPDHRVGLLCF---------REFANA--RFTELTE 161


>gi|315446769|ref|YP_004079648.1| hypothetical protein Mspyr1_52890 [Mycobacterium sp. Spyr1]
 gi|315265072|gb|ADU01814.1| Protein of unknown function DUF88 [Mycobacterium sp. Spyr1]
          Length = 171

 Score = 38.8 bits (89), Expect = 0.30,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 50/144 (34%), Gaps = 24/144 (16%)

Query: 6   EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
           ++  + +D  N+     A+   + + K          V+         GD          
Sbjct: 17  KRRIVLVDIENVVGGLSAVRDHVSWAK----------VVIGECVPAQPGDQVVIGVGPTG 66

Query: 66  LLD-WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELA-VDAFEQSEGLEHLVIFSGDG 123
           LLD    +   + V +  +            +  D+ L  V     ++    +V+ SGDG
Sbjct: 67  LLDLACAWKSVRYVMRPGQ------------NGADLALLEVLGENIADRFTEVVLVSGDG 114

Query: 124 CFTTLVAALQRKVKKVTIVSTVLS 147
            FT  +AAL  +  K T+V+    
Sbjct: 115 IFTHAIAALASRGVKTTVVAHASG 138


>gi|296131338|ref|YP_003638588.1| hypothetical protein Cfla_3517 [Cellulomonas flavigena DSM 20109]
 gi|296023153|gb|ADG76389.1| conserved hypothetical protein [Cellulomonas flavigena DSM 20109]
          Length = 163

 Score = 38.8 bits (89), Expect = 0.31,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 25/71 (35%), Gaps = 6/71 (8%)

Query: 92  KRVKSSMDVELA--VDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDP 149
           +      DV L   VD          LV+ SGD  F  LV  ++R   +   V    +  
Sbjct: 79  RSGAGGADVALVDDVDLGHLVARFTWLVVASGDHAFVPLVETVRRAGVRTWQV----TGA 134

Query: 150 SMASDQLRRQA 160
              +  L R A
Sbjct: 135 GRPAHALLRTA 145


>gi|320166337|gb|EFW43236.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 428

 Score = 38.8 bits (89), Expect = 0.32,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 48/153 (31%), Gaps = 9/153 (5%)

Query: 30  YRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKE-FTEN 88
           +  LL+ F      +  Y++T+               L  +      + +K         
Sbjct: 22  FVNLLEHFCGSR-FVEVYFFTSAPDTVGPAPLHARLRLAQIKPCISPLKSKNVTCTHCNA 80

Query: 89  CGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVL 146
                V++ +DV LA           L  L + +GDG F  ++  +     +   +    
Sbjct: 81  HFSTVVQAGVDVALATKVLTLVGEKALTGLFLLTGDGDFKEMLHYVTD--VRHIPMWLA- 137

Query: 147 SDPSMASDQLRRQADY--FMDLAYLKNEIARDP 177
                 S  L+  A+    + L  + + I   P
Sbjct: 138 GFQKCTSTLLQAYANRGAILWLDEIWDAITYQP 170


>gi|281415100|ref|ZP_06246842.1| hypothetical protein MlutN2_07862 [Micrococcus luteus NCTC 2665]
          Length = 162

 Score = 38.8 bits (89), Expect = 0.32,   Method: Composition-based stats.
 Identities = 8/53 (15%), Positives = 21/53 (39%), Gaps = 2/53 (3%)

Query: 86  TENCGRKRVKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKV 136
            ++      +  +D+ + +D    +  E +  +++ SGD  F       +R  
Sbjct: 50  ADDFLLDITQKGVDMRVGLDIAALAATEPVNQIIMISGDSDFVPAGKHARRSG 102


>gi|320532285|ref|ZP_08033142.1| hypothetical protein HMPREF9057_01013 [Actinomyces sp. oral taxon
           171 str. F0337]
 gi|320135502|gb|EFW27593.1| hypothetical protein HMPREF9057_01013 [Actinomyces sp. oral taxon
           171 str. F0337]
          Length = 234

 Score = 38.8 bits (89), Expect = 0.34,   Method: Composition-based stats.
 Identities = 22/159 (13%), Positives = 44/159 (27%), Gaps = 34/159 (21%)

Query: 10  LFIDGANLYASSK-----------------ALGFDIDYRKLLKAFRSRAIVIRAYYYTTV 52
           L +DG N+ A+                    +    D      A        RA ++   
Sbjct: 41  LLVDGENIDATLGMSVLGRRPEPEERPRWDRVLAYCDELSSADATEGEGDEARALFFLNA 100

Query: 53  VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG 112
                         +  L    ++ V                +  +D+ +       +E 
Sbjct: 101 TSGHMP-----MSFIQALLAMDYRPVPL-------AGSGSNEEKVVDIGIQRTLEALAER 148

Query: 113 LE-----HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVL 146
           +E     H+++ S DG +   +  L +   KV I+    
Sbjct: 149 VESGQEAHVLLGSHDGDYIPHIERLLQAGAKVGILCFRE 187


>gi|238926766|ref|ZP_04658526.1| hypothetical protein HMPREF0908_0666 [Selenomonas flueggei ATCC
           43531]
 gi|238885298|gb|EEQ48936.1| hypothetical protein HMPREF0908_0666 [Selenomonas flueggei ATCC
           43531]
          Length = 293

 Score = 38.8 bits (89), Expect = 0.34,   Method: Composition-based stats.
 Identities = 24/167 (14%), Positives = 44/167 (26%), Gaps = 30/167 (17%)

Query: 1   MFDPR-EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ 59
           M D   + +A+  D  N                          +  A  Y          
Sbjct: 1   MLDSSSDTVAILYDIENAPIEMLQY-----------------TIDIAQRYQPCRMIVVSD 43

Query: 60  FSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG-LEHLVI 118
           +        W       ++      F +       K+S+D  L   A    +  +    I
Sbjct: 44  WEAHPDQKRWDR-----LMESPDFTFRQISRTFLGKNSLDSALYDSAQILYQEGVRKYFI 98

Query: 119 FSGDGCFTTLVAALQRKV-KKVTIVSTVLSDPSMASDQLRRQADYFM 164
            + D  F  +  +L  +    +  + T       AS+ LR   + F 
Sbjct: 99  ITTDSDFVRIAESLNSEDPSYIIGIGTKQ-----ASEDLRNAYNEFF 140


>gi|15645947|ref|NP_208126.1| hypothetical protein HP1334 [Helicobacter pylori 26695]
 gi|2314514|gb|AAD08389.1| predicted coding region HP1334 [Helicobacter pylori 26695]
          Length = 224

 Score = 38.8 bits (89), Expect = 0.34,   Method: Composition-based stats.
 Identities = 22/189 (11%), Positives = 55/189 (29%), Gaps = 58/189 (30%)

Query: 6   EKIALFIDGANL---YAS-SKALGFDIDYRKLLKAFRSRA----------IVIRAYYYTT 51
           +K+A+ +DG      Y S  K    D++ +KL     +             + R ++Y  
Sbjct: 3   KKVAILVDGDFFIRCYKSHLKKQPEDLNPKKLAHHIHTYCLKHINKKNDEELYRIFFYDC 62

Query: 52  VVGDPEQQFSPLHPLLDWLHYNGFQ--------VVAKVAK-------------------- 83
                +  +      LD      ++        +++K                       
Sbjct: 63  KPLKKKAHYPYTQKALDLSKSPTYREREELHEHLISKPCLALRLGYLDEKNARWVIRDQE 122

Query: 84  --------------EFTENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTT 127
                            ++      +  +D+++ +D    +    ++ +V+ SGD  F  
Sbjct: 123 KEKKLFNRRISIEEFQNDDFIYHAKQKGVDIKIGLDIATLALKKLVQKIVLISGDSDFVP 182

Query: 128 LVAALQRKV 136
                + + 
Sbjct: 183 ASKLARVEG 191


>gi|271965410|ref|YP_003339606.1| hypothetical protein Sros_3953 [Streptosporangium roseum DSM 43021]
 gi|270508585|gb|ACZ86863.1| hypothetical protein Sros_3953 [Streptosporangium roseum DSM 43021]
          Length = 148

 Score = 38.8 bits (89), Expect = 0.36,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 48/157 (30%), Gaps = 23/157 (14%)

Query: 11  FIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWL 70
            +D  NL  +++    D+               + A Y+  V      Q+         L
Sbjct: 12  LLDVENLVGNARPATRDV-------------RTMMARYHERVPTGGMDQYVAAVN-HGAL 57

Query: 71  HYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVA 130
              G  +        +   G             +     ++  E +VI SGDG F     
Sbjct: 58  VPVGLALAGIQLLVRSGPDGADGALGE-----VIRLDHLADRFERVVIGSGDGIFADFAG 112

Query: 131 ALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLA 167
            L  +   V +VS     P   + +LRR A   + L 
Sbjct: 113 WLSGRGVLVVVVS----RPESLNRRLRRTAAQVISLD 145


>gi|227489162|ref|ZP_03919478.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
           ATCC 51867]
 gi|227540727|ref|ZP_03970776.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
           ATCC 51866]
 gi|227090868|gb|EEI26180.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
           ATCC 51867]
 gi|227183484|gb|EEI64456.1| conserved hypothetical protein [Corynebacterium glucuronolyticum
           ATCC 51866]
          Length = 225

 Score = 38.8 bits (89), Expect = 0.36,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 60/188 (31%), Gaps = 41/188 (21%)

Query: 10  LFIDGANLYASSKAL-------GFDIDYRKLLKAFRSRAIVI------RAYYYTTVVGDP 56
           L  D  N+     ++        +   +  + +    RA  +       A  +T V    
Sbjct: 23  LVWDAPNVDMGLGSILGGRPTSAYRPRFDAIGRWLLKRAEQLGEDIEPEATVFTNVAPGG 82

Query: 57  EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG---- 112
            +    +   ++ L   GF V AK              KS  D ++  D           
Sbjct: 83  AE---VMRSWVEALRNVGFAVFAKP-------------KSEEDSDVDPDMLAHIRRRHTE 126

Query: 113 --LEHLVIFSGDG-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
             L  +V+ S DG  F  L+  L  +    T++         AS  +  +   F+DL  +
Sbjct: 127 GVLRGVVVASADGQNFRELLLELADEGIPATVIGFH----EHASWAVTAENIEFVDLEEI 182

Query: 170 KNEIARDP 177
                R+P
Sbjct: 183 PGVF-REP 189


>gi|317012923|gb|ADU83531.1| hypothetical protein HPLT_05705 [Helicobacter pylori Lithuania75]
          Length = 255

 Score = 38.5 bits (88), Expect = 0.36,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 31/70 (44%), Gaps = 3/70 (4%)

Query: 94  VKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151
            +  +D  LA D  +   ++    +++FS D  F  ++ A   K  +V  ++ +   P++
Sbjct: 142 RQKQIDALLAHDITKLYCTKQGGCILLFSKDTDFVPVLEAAWEKGFEV-FIAKIEESPNL 200

Query: 152 ASDQLRRQAD 161
               L+   D
Sbjct: 201 VPPDLKDPCD 210


>gi|259047876|ref|ZP_05738277.1| conserved hypothetical protein [Granulicatella adiacens ATCC 49175]
 gi|259035553|gb|EEW36808.1| conserved hypothetical protein [Granulicatella adiacens ATCC 49175]
          Length = 224

 Score = 38.5 bits (88), Expect = 0.36,   Method: Composition-based stats.
 Identities = 7/45 (15%), Positives = 22/45 (48%), Gaps = 2/45 (4%)

Query: 94  VKSSMDVELAVDAFEQS--EGLEHLVIFSGDGCFTTLVAALQRKV 136
            +  +D+ + +D  + +  + +E +++ +GD  F       +R+ 
Sbjct: 145 EQKGVDMRIGLDIAQLAFKKQVEKIILIAGDSDFVPAAKLARREG 189


>gi|307204444|gb|EFN83151.1| Limkain-b1 [Harpegnathos saltator]
          Length = 1652

 Score = 38.5 bits (88), Expect = 0.37,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 59/173 (34%), Gaps = 20/173 (11%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           I +F D  N           +  + +   F S     R   +  V    ++ +  +  L 
Sbjct: 100 IGVFWDIENCQVPKGRSAIAVT-QVIRDKFFSGY---REAEFIVVCDVQKENYQIIQELN 155

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTT 127
           D              K   +   ++ ++   D+  +  A         +++ SGD  F  
Sbjct: 156 DAQVNLIHVSATC--KNAADEKLKQSIRRFADIHGSPAA---------IILISGDINFAA 204

Query: 128 LVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI-ARDPDE 179
            ++ L+ + K++ ++   L      S+ L   A+   D   L   + +R P +
Sbjct: 205 DLSDLRHR-KRIHVI---LLHKKNTSEALILCANEHYDFTELMEPLPSRTPAK 253


>gi|226941993|ref|YP_002797067.1| Gp9, Cpp15 [Laribacter hongkongensis HLHK9]
 gi|226716920|gb|ACO76058.1| Gp9, Cpp15 [Laribacter hongkongensis HLHK9]
          Length = 227

 Score = 38.5 bits (88), Expect = 0.37,   Method: Composition-based stats.
 Identities = 16/149 (10%), Positives = 44/149 (29%), Gaps = 20/149 (13%)

Query: 33  LLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRK 92
           L +A   +  ++              +      +L                   ++    
Sbjct: 90  LHEALSRKRKLVLRRGQLADFNQWNIKPMVQRQILKGERSVDDL--------RDDDFIYD 141

Query: 93  RVKSSMDVELAVDA--FEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS 150
             ++ +D  +A+D       +  + +V+F+ D  F  L   ++ +   + +         
Sbjct: 142 VRQNGIDTLMALDVAGIVYKKLADQVVLFAADADFVPLAQLVRPEGIDLVL----DPMWK 197

Query: 151 MASDQLRRQADYFMDLAYLKNEIARDPDE 179
             + +L      F  +  L++   R   E
Sbjct: 198 PVAPEL------FNHIDGLRSTCPRPVRE 220


>gi|298735852|ref|YP_003728377.1| hypothetical protein HPB8_356 [Helicobacter pylori B8]
 gi|298355041|emb|CBI65913.1| hypothetical protein HPB8_356 [Helicobacter pylori B8]
          Length = 148

 Score = 38.5 bits (88), Expect = 0.40,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 30/69 (43%), Gaps = 3/69 (4%)

Query: 94  VKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSM 151
            +  +D  LA D  +   ++    +++FS D  F  ++ A   K  +V I +     P++
Sbjct: 37  RQKQIDALLAHDITKLYCTKQGGCILLFSKDTDFVPVLEAAWEKGFEVFIANIQEG-PNL 95

Query: 152 ASDQLRRQA 160
               L++  
Sbjct: 96  VPPDLKKSC 104


>gi|302883636|ref|XP_003040717.1| hypothetical protein NECHADRAFT_67900 [Nectria haematococca mpVI
           77-13-4]
 gi|256721607|gb|EEU35004.1| hypothetical protein NECHADRAFT_67900 [Nectria haematococca mpVI
           77-13-4]
          Length = 434

 Score = 38.5 bits (88), Expect = 0.41,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 61/194 (31%), Gaps = 28/194 (14%)

Query: 8   IALFIDGANLYAS-SKALGFDIDYRKLLKA-------FRSRAIVIRAYYYTTVV--GDPE 57
           I +FID +N+     KAL       + ++              ++    +   +  G   
Sbjct: 238 IHVFIDMSNIIIGFQKALRARYSLPESVRFIPLPQMNLEFFHKLLVRDRHAEWLNVGCSM 297

Query: 58  QQFSPLHPLLDWLHYNGFQV---VAKVAKEFTENCGRKRVKSSMD----VELAVDAFEQS 110
                    ++ L   G++V     +      E  G + V+  +D    + +     +  
Sbjct: 298 HPDKQKPHFIEELEDLGYRVDLRSRRPQNMAMEGHGSRYVEDMVDETLQIRIGESVMQYF 357

Query: 111 EGLEHLVIFSGD------GC-FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRR--QAD 161
           +    LV+ +GD         F        +    V +VS   S  S  +   +      
Sbjct: 358 DKPGTLVLATGDARPAKYSDGFLAYAQRALKMGWNVEVVSWRSSLSSAWNGVWKEEGVGS 417

Query: 162 YF--MDLAYLKNEI 173
            F  ++L    +E+
Sbjct: 418 RFRVIELDQFLDEL 431


>gi|297836172|ref|XP_002885968.1| hypothetical protein ARALYDRAFT_480415 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297331808|gb|EFH62227.1| hypothetical protein ARALYDRAFT_480415 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 451

 Score = 38.5 bits (88), Expect = 0.42,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 41/138 (29%), Gaps = 19/138 (13%)

Query: 9   ALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL-HPLL 67
           A+  D  N       +  D+    +    R    +        V       F+     + 
Sbjct: 15  AILWDMENCP-----VPSDVRPEDVASNIRMAIQLHPVISGPVVNFSAYGDFNAFPRRVR 69

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGDGC 124
           +     G +++                K + D  + +D F      +    +++ SGD  
Sbjct: 70  EGCQRTGVRLIDVP----------NGRKDASDKAILIDMFLFVLDNKPPATIILVSGDVD 119

Query: 125 FTTLVAALQRKVKKVTIV 142
           F   +  L ++   V +V
Sbjct: 120 FAPALHILGQRGYTVILV 137


>gi|208435230|ref|YP_002266896.1| hypothetical protein HPG27_1282 [Helicobacter pylori G27]
 gi|208433159|gb|ACI28030.1| hypothetical protein HPG27_1282 [Helicobacter pylori G27]
          Length = 220

 Score = 38.5 bits (88), Expect = 0.44,   Method: Composition-based stats.
 Identities = 10/108 (9%), Positives = 31/108 (28%), Gaps = 8/108 (7%)

Query: 31  RKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCG 90
            +L +   S+  +     Y                   +      +          ++  
Sbjct: 86  EELHEHLISKPCLALRLGYLDEKNARWVIRDQEKEKKLFNRRISIEEFQN------DDFI 139

Query: 91  RKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136
               +  +D+++ +D    +    ++ +V+ SGD  F       + + 
Sbjct: 140 YHAKQKGVDIKIGLDIATLALKKLVQKIVLISGDSDFVPASKLARVEG 187


>gi|320592592|gb|EFX05022.1| hypothetical protein CMQ_5284 [Grosmannia clavigera kw1407]
          Length = 457

 Score = 38.5 bits (88), Expect = 0.45,   Method: Composition-based stats.
 Identities = 20/176 (11%), Positives = 49/176 (27%), Gaps = 49/176 (27%)

Query: 6   EKIALFIDGANLYA------------------SSKALGFDIDYRKLLKAFRSRAIVIRAY 47
           E    F+D +N++                   S +     ID  KL++   +      +Y
Sbjct: 7   ETCMFFVDDSNIWIEAQKFAAVRDNHVPGLSDSDRDPRLRIDVGKLIRVILNGRSQGPSY 66

Query: 48  YYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAF 107
            Y +     +  ++                   + K +  + G+   +  +D  ++VD  
Sbjct: 67  LYGSRPPPNDSVWNVFKKSQF------------LTKIYDRSNGK---EKEVDTAMSVDMS 111

Query: 108 EQSEGLE----------------HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLS 147
            ++  +                   +  +GD      V  +      V + +    
Sbjct: 112 SEATEISVMAKFDCISRSKKAQTTFIAITGDRDMIPPVKKVLAYNIHVELWAWSSG 167


>gi|109900172|ref|YP_663427.1| arginine decarboxylase [Pseudoalteromonas atlantica T6c]
 gi|109702453|gb|ABG42373.1| arginine decarboxylase [Pseudoalteromonas atlantica T6c]
          Length = 642

 Score = 38.5 bits (88), Expect = 0.46,   Method: Composition-based stats.
 Identities = 20/153 (13%), Positives = 48/153 (31%), Gaps = 20/153 (13%)

Query: 23  ALGFDIDYRKLLKAFRSRAI--VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAK 80
                ID++ +++  +   I   +   ++  +              ++   Y G  +   
Sbjct: 44  NKNMRIDFQSVIEEIKEEGIQFPVVVRFHDILRSQVACLNQTFINTIEEAQYQGKYMGVY 103

Query: 81  VAKEF-----------TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG--DGCFTT 127
             K                     +++    EL +     +  ++ L I +G  D  F  
Sbjct: 104 PVKVNQMREVVEEIVDAGAPFNYGLEAGSKAEL-ITVMAYNTNIDSLTILNGYKDAEFMR 162

Query: 128 LVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160
           L    ++  +K+ +V    S+ S+    L   A
Sbjct: 163 LALLGRKLGRKMIVVIEKYSELSL----LVNAA 191


>gi|326431690|gb|EGD77260.1| hypothetical protein PTSG_08354 [Salpingoeca sp. ATCC 50818]
          Length = 631

 Score = 38.1 bits (87), Expect = 0.48,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 52/180 (28%), Gaps = 34/180 (18%)

Query: 10  LFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDW 69
           +F+D +N++  ++      D   +    RS   +I                       +W
Sbjct: 304 VFVDNSNVFIGAQLESSVRDL-AVRVNIRSLCGIIEDNMPCAFRAVAGTNPHSGRIWHEW 362

Query: 70  LHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSE---GLEHLVIFSGDGC-- 124
            + +                   R  +SM   +A    E +      + LV+ +GDG   
Sbjct: 363 ENNH-------------YCTLLDRSDASMHNVIAAKIVEVANSGANPQTLVLVTGDGNEV 409

Query: 125 -----FTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYF------MDLAYLKNEI 173
                F  L     +   +V + S   S     S + R   + F        L   +  I
Sbjct: 410 EGNESFPRLAERAIQHGWRVRVWSWEQSL----SGKFRDLKERFRANITIHFLDPFRERI 465


>gi|255578428|ref|XP_002530079.1| conserved hypothetical protein [Ricinus communis]
 gi|223530432|gb|EEF32319.1| conserved hypothetical protein [Ricinus communis]
          Length = 952

 Score = 38.1 bits (87), Expect = 0.48,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 46/154 (29%), Gaps = 23/154 (14%)

Query: 7   KIALFIDGAN--LYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
           K++++ D  N  L                L+A   +  V    +           F    
Sbjct: 58  KVSVWWDFENCNLPTGVNVFKVAHAITAALRANGIKGPVQITAF--------GDVFQLSR 109

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAF---EQSEGLEHLVIFSG 121
              + L   G  +                 K+S D  L VD      Q+    HL + SG
Sbjct: 110 ANQEALSSTGINLAHVP----------HGGKNSADRSLLVDLMYWVSQNPPPAHLFLISG 159

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQ 155
           D  F +++  L+     V + S   +   + S  
Sbjct: 160 DRDFASILHRLRMINYNVLLASNDTAPSVLCSAA 193


>gi|226357736|ref|YP_002787476.1| tricarballylate dehydrogenase [Deinococcus deserti VCD115]
 gi|226319979|gb|ACO47972.1| putative FAD binding protein, putative fumarate reductase
           flavoprotein subunit [Deinococcus deserti VCD115]
          Length = 509

 Score = 38.1 bits (87), Expect = 0.52,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 33/85 (38%), Gaps = 3/85 (3%)

Query: 100 VELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQ 159
           + L  D+       + +V+ +G+      ++  + +  +V ++          +      
Sbjct: 1   MHLNSDSPSDQHTFDTVVVGAGNAALCAALS-ARERGMRVLVLERGPHGKRGGNSYFTDG 59

Query: 160 ADYFM--DLAYLKNEIARDPDEDKK 182
           A  F   DL  +++ I R  DE+ +
Sbjct: 60  AIRFAYNDLNDIRDVIPRISDEEAE 84


>gi|4335722|gb|AAD17400.1| unknown protein [Arabidopsis thaliana]
          Length = 524

 Score = 38.1 bits (87), Expect = 0.52,   Method: Composition-based stats.
 Identities = 20/145 (13%), Positives = 41/145 (28%), Gaps = 33/145 (22%)

Query: 9   ALFIDGANLYAS--------SKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQF 60
           A+  D  N            +  +   I    ++        V+    Y    G      
Sbjct: 15  AILWDMENCPVPSDVRPEDVASNIRMAIQLHPVIS-----GPVVNFSAYGDFNG------ 63

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLV 117
                + +     G +++                K + D  + +D F      +    +V
Sbjct: 64  -FPRRVREGCQRTGVKLIDVP----------NGRKDASDKAILIDMFLFVLDNKPPATIV 112

Query: 118 IFSGDGCFTTLVAALQRKVKKVTIV 142
           + SGD  F   +  L ++   V +V
Sbjct: 113 LVSGDVDFAPALHILGQRGYTVILV 137


>gi|330981754|gb|EGH79857.1| hypothetical protein PSYAP_24836 [Pseudomonas syringae pv. aptata
          str. DSM 50252]
          Length = 63

 Score = 38.1 bits (87), Expect = 0.54,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 21/62 (33%), Gaps = 10/62 (16%)

Query: 1  MFDPREK--IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58
          M +  +   +A+FID  N  A SK LG       +L    S   V     Y         
Sbjct: 1  MSNQLQNLNVAMFIDADN--APSKKLG------SVLAELASYGAVSIRRAYGNWKSPSLD 52

Query: 59 QF 60
           +
Sbjct: 53 PW 54


>gi|300780304|ref|ZP_07090160.1| conserved hypothetical protein [Corynebacterium genitalium ATCC
           33030]
 gi|300534414|gb|EFK55473.1| conserved hypothetical protein [Corynebacterium genitalium ATCC
           33030]
          Length = 223

 Score = 38.1 bits (87), Expect = 0.54,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 44/121 (36%), Gaps = 25/121 (20%)

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG------LEHLV 117
            P ++ L   GF V AK              K+  D ++  +  E  E       L+ +V
Sbjct: 92  RPWVEALRNVGFAVFAKP-------------KADDDSDVDGEMIEHIERRRAEGVLQGVV 138

Query: 118 IFSGDG-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
           + S DG  F  L+  L       T++         AS  +   A  F+DL  +     R+
Sbjct: 139 VASADGQNFHELLDELSADGLPATVLGFH----EHASWAVTSPAITFVDLEDIPGVF-RE 193

Query: 177 P 177
           P
Sbjct: 194 P 194


>gi|315930785|gb|EFV09786.1| Putative uncharacterized protein [Campylobacter jejuni subsp.
           jejuni 305]
          Length = 226

 Score = 38.1 bits (87), Expect = 0.55,   Method: Composition-based stats.
 Identities = 7/48 (14%), Positives = 20/48 (41%), Gaps = 2/48 (4%)

Query: 91  RKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136
               +  +D+++ +D    +    ++ +V+ SGD  F       + + 
Sbjct: 147 YYAKQKGVDMKIGIDIATLALKKLVQKIVLISGDSDFVPASKLARTEG 194


>gi|154315023|ref|XP_001556835.1| hypothetical protein BC1G_04853 [Botryotinia fuckeliana B05.10]
 gi|150848391|gb|EDN23584.1| hypothetical protein BC1G_04853 [Botryotinia fuckeliana B05.10]
          Length = 270

 Score = 38.1 bits (87), Expect = 0.55,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 21/56 (37%), Gaps = 8/56 (14%)

Query: 106 AFEQSEG--LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQ 159
           A    +    + LV+ S D  F  LV  L RK  +  +V +        S  L R 
Sbjct: 141 AMRHRKETLYDWLVLISDDTDFGDLVKRLSRKGVRTIVVGSKP------SRNLVRA 190


>gi|77463789|ref|YP_353293.1| hypothetical protein RSP_6103 [Rhodobacter sphaeroides 2.4.1]
 gi|77388207|gb|ABA79392.1| hypothetical protein RSP_6103 [Rhodobacter sphaeroides 2.4.1]
          Length = 161

 Score = 38.1 bits (87), Expect = 0.55,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 28/87 (32%), Gaps = 1/87 (1%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           +I L +D  NL  S++ L   +D+  L  AF       +   +     D       +H +
Sbjct: 39  RILLLVDAENLVLSARDLDVALDFEALRAAFARYDR-RQVECHAVYSQDIGDGPLAVHLV 97

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKR 93
               H      + ++  +         
Sbjct: 98  RRGWHPTPRPPIQRLPADRGHRNADNW 124


>gi|307638007|gb|ADN80457.1| hypothetical protein hp908_1336 [Helicobacter pylori 908]
          Length = 123

 Score = 38.1 bits (87), Expect = 0.58,   Method: Composition-based stats.
 Identities = 9/82 (10%), Positives = 29/82 (35%), Gaps = 2/82 (2%)

Query: 57  EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG--LE 114
           +++ +             F     + K   ++      +  +D+++ +D    +    ++
Sbjct: 9   DEKNARWVIRDQEKEKKLFNRRISIEKFQNDDFIYHAKQKGVDIKIGLDIATLALKKLVQ 68

Query: 115 HLVIFSGDGCFTTLVAALQRKV 136
            +V+ SGD  F       + + 
Sbjct: 69  KIVLISGDSDFVPASKLARVEG 90


>gi|30679459|ref|NP_179158.2| unknown protein [Arabidopsis thaliana]
 gi|34365745|gb|AAQ65184.1| At2g15560 [Arabidopsis thaliana]
 gi|51968780|dbj|BAD43082.1| unknown protein [Arabidopsis thaliana]
 gi|51970842|dbj|BAD44113.1| unknown protein [Arabidopsis thaliana]
 gi|110738852|dbj|BAF01349.1| hypothetical protein [Arabidopsis thaliana]
 gi|330251322|gb|AEC06416.1| Putative endonuclease or glycosyl hydrolase [Arabidopsis thaliana]
          Length = 489

 Score = 38.1 bits (87), Expect = 0.58,   Method: Composition-based stats.
 Identities = 20/140 (14%), Positives = 43/140 (30%), Gaps = 23/140 (16%)

Query: 9   ALFIDGAN--LYASSKALGFDIDYRKLLK-AFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
           A+  D  N  + +  +      + R  ++        V+    Y    G           
Sbjct: 51  AILWDMENCPVPSDVRPEDVASNIRMAIQLHPVISGPVVNFSAYGDFNG-------FPRR 103

Query: 66  LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVIFSGD 122
           + +     G +++                K + D  + +D F      +    +V+ SGD
Sbjct: 104 VREGCQRTGVKLIDVP----------NGRKDASDKAILIDMFLFVLDNKPPATIVLVSGD 153

Query: 123 GCFTTLVAALQRKVKKVTIV 142
             F   +  L ++   V +V
Sbjct: 154 VDFAPALHILGQRGYTVILV 173


>gi|317180877|dbj|BAJ58663.1| hypothetical protein HPF32_1081 [Helicobacter pylori F32]
          Length = 265

 Score = 37.7 bits (86), Expect = 0.64,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 3/75 (4%)

Query: 89  CGRKRVKSSMDVELAVDAFEQ--SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVL 146
              K  +  +D  LA D  +   ++    +++FS D  F  ++ A   K  +V I +   
Sbjct: 148 PHLKLRQKQIDALLAHDITKLYCTKQGGCILLFSKDTDFVPVLEAAWEKDFEVFIANIQE 207

Query: 147 SDPSMASDQLRRQAD 161
              ++    LR+  D
Sbjct: 208 GL-NLVPPDLRKSCD 221


>gi|262379821|ref|ZP_06072977.1| FAD/FMN-binding/pyridine nucleotide-disulphide oxidoreductase
           [Acinetobacter radioresistens SH164]
 gi|262299278|gb|EEY87191.1| FAD/FMN-binding/pyridine nucleotide-disulphide oxidoreductase
           [Acinetobacter radioresistens SH164]
          Length = 674

 Score = 37.7 bits (86), Expect = 0.65,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 36/91 (39%), Gaps = 4/91 (4%)

Query: 69  WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTL 128
           W+H  G  +  K  +  +     K     +   + VD       ++++VI +G   +T +
Sbjct: 580 WIHRTG--LKHKHVQMMSGVNYEKIDDQGL--HITVDGKPMLLEVDNVVICAGQESYTAM 635

Query: 129 VAALQRKVKKVTIVSTVLSDPSMASDQLRRQ 159
              LQ   K+V ++        + + +  RQ
Sbjct: 636 FEQLQADGKRVHLIGGAREAGELDAKRAIRQ 666


>gi|255318128|ref|ZP_05359372.1| FAD/FMN-binding/pyridine nucleotide-disulphide oxidoreductase
           family protein [Acinetobacter radioresistens SK82]
 gi|255304839|gb|EET84012.1| FAD/FMN-binding/pyridine nucleotide-disulphide oxidoreductase
           family protein [Acinetobacter radioresistens SK82]
          Length = 687

 Score = 37.7 bits (86), Expect = 0.65,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 36/91 (39%), Gaps = 4/91 (4%)

Query: 69  WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTL 128
           W+H  G  +  K  +  +     K     +   + VD       ++++VI +G   +T +
Sbjct: 593 WIHRTG--LKHKHVQMMSGVNYEKIDDQGL--HITVDGKPMLLEVDNVVICAGQESYTAM 648

Query: 129 VAALQRKVKKVTIVSTVLSDPSMASDQLRRQ 159
              LQ   K+V ++        + + +  RQ
Sbjct: 649 FEQLQADGKRVHLIGGAREAGELDAKRAIRQ 679


>gi|317178375|dbj|BAJ56163.1| hypothetical protein HPF30_0066 [Helicobacter pylori F30]
          Length = 230

 Score = 37.7 bits (86), Expect = 0.66,   Method: Composition-based stats.
 Identities = 7/53 (13%), Positives = 22/53 (41%), Gaps = 2/53 (3%)

Query: 86  TENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136
            ++      +  +D+++ +D    +    ++ +V+ SGD  F       + + 
Sbjct: 143 NDDFIYHAKQKGVDIKIGLDIATLALKKLVQKIVLISGDSDFVPAAKLARVEG 195


>gi|317177894|dbj|BAJ55683.1| hypothetical protein HPF16_1086 [Helicobacter pylori F16]
          Length = 221

 Score = 37.7 bits (86), Expect = 0.67,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 3/75 (4%)

Query: 89  CGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVL 146
              K  +  +D  LA D  +   ++    +++FS D  F  ++ A   K  +V  ++ + 
Sbjct: 104 PHLKLRQKQIDALLAHDITKPYCTKQGGCILLFSKDTNFVPVLEAAWEKGFEV-FIANIQ 162

Query: 147 SDPSMASDQLRRQAD 161
            DP++    LR+  D
Sbjct: 163 KDPNLVPPDLRKSCD 177


>gi|85714185|ref|ZP_01045174.1| tRNA-i(6)A37 modification enzyme MiaB [Nitrobacter sp. Nb-311A]
 gi|85699311|gb|EAQ37179.1| tRNA-i(6)A37 modification enzyme MiaB [Nitrobacter sp. Nb-311A]
          Length = 478

 Score = 37.7 bits (86), Expect = 0.70,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 52/170 (30%), Gaps = 16/170 (9%)

Query: 16  NLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGF 75
           N Y      G    + KLL        ++R  Y T+   D E      H  LD L     
Sbjct: 221 NAYHGEGPDGRPWPFGKLLYRLAEIPGIVRLRYSTSHPRDVEDSLIDAHRHLDALMPF-- 278

Query: 76  QVVAKVAKEFTEN--CGRKRVKSSMDVELAVDAFEQSEG-----LEHLVIFSGDG--CFT 126
             V    +  ++       R  S+ D    +D F  +        + +V F G+    F 
Sbjct: 279 --VHLPVQSGSDRILAAMNRRHSASDYRRVIDRFRHARQDIAFSSDFIVGFPGETEEDFA 336

Query: 127 TLVAALQRKVKKVTIVSTVLSDPSMA-SDQLRRQADYFMDLAYLKNEIAR 175
             +A + +        S   S      + +LR       D+      + +
Sbjct: 337 ATLALVGQIGYA-AAYSFKYSPRPGTPAAELREAVST-ADMDARLERLQK 384


>gi|332308197|ref|YP_004436048.1| arginine decarboxylase [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332175526|gb|AEE24780.1| arginine decarboxylase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 640

 Score = 37.7 bits (86), Expect = 0.70,   Method: Composition-based stats.
 Identities = 19/153 (12%), Positives = 47/153 (30%), Gaps = 20/153 (13%)

Query: 23  ALGFDIDYRKLLKAFRSRAI--VIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAK 80
                ID++ +++  +   I   +   ++  +              ++   Y G  +   
Sbjct: 42  NKNMRIDFQSVIEEIKQEGIQFPVVVRFHDILRSQVACLNQTFIDTIEEAQYQGKYMGVY 101

Query: 81  VAKEF-----------TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG--DGCFTT 127
             K                     +++    EL +     +  ++ L I +G  D  F  
Sbjct: 102 PVKVNQMREVVEEIVDAGAPFNYGLEAGSKAEL-ITVMAYNTNIDSLTILNGYKDAEFMR 160

Query: 128 LVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160
           L    ++  +K+ +V    S+  +    L   A
Sbjct: 161 LALLGRKLGRKMIVVIEKYSELGL----LVDAA 189


>gi|296088635|emb|CBI37626.3| unnamed protein product [Vitis vinifera]
          Length = 871

 Score = 37.7 bits (86), Expect = 0.71,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 48/160 (30%), Gaps = 28/160 (17%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVG--DPEQQFSPLH 64
           K++++ D  N    +    F I          S    +RA      +             
Sbjct: 51  KVSVWWDFENCNIPAGVNVFKI--------AHSITAAVRANGIKGPLQITAFGDVSQLAR 102

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAF---EQSEGLEHLVIFSG 121
              + L   G  +                 K+S D  L +D      Q+    HL + SG
Sbjct: 103 SNQEALSSTGINLAHIP----------NGGKNSADRSLLLDLMYWVSQNPPPAHLFLISG 152

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
           D  F +++  L+     V + S     P  AS  L   A 
Sbjct: 153 DRDFASILHRLRMSNYNVLLAS-----PGTASGVLCSAAS 187


>gi|225431392|ref|XP_002272192.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 990

 Score = 37.7 bits (86), Expect = 0.71,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 48/160 (30%), Gaps = 28/160 (17%)

Query: 7   KIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVG--DPEQQFSPLH 64
           K++++ D  N    +    F I          S    +RA      +             
Sbjct: 51  KVSVWWDFENCNIPAGVNVFKI--------AHSITAAVRANGIKGPLQITAFGDVSQLAR 102

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAF---EQSEGLEHLVIFSG 121
              + L   G  +                 K+S D  L +D      Q+    HL + SG
Sbjct: 103 SNQEALSSTGINLAHIP----------NGGKNSADRSLLLDLMYWVSQNPPPAHLFLISG 152

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
           D  F +++  L+     V + S     P  AS  L   A 
Sbjct: 153 DRDFASILHRLRMSNYNVLLAS-----PGTASGVLCSAAS 187


>gi|172039849|ref|YP_001799563.1| hypothetical protein cur_0169 [Corynebacterium urealyticum DSM
           7109]
 gi|171851153|emb|CAQ04129.1| hypothetical protein cu0169 [Corynebacterium urealyticum DSM 7109]
          Length = 277

 Score = 37.7 bits (86), Expect = 0.72,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 42/117 (35%), Gaps = 19/117 (16%)

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG---LEHLVIFS 120
            P ++ L   GF V AK          +   +S +D ++ +D   +      L+ L++ S
Sbjct: 133 RPWVEALRNVGFAVFAKP---------KITEESDVDADM-LDLIRRRHSEGILDGLIVAS 182

Query: 121 GDG-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
            DG  F   +  L      VT++          +  L  +   F+DL  +       
Sbjct: 183 ADGQNFRETLEELSE-DIPVTVIGF----REHVAWVLGNEKLRFVDLEDIPGVFREP 234


>gi|329947325|ref|ZP_08294590.1| hypothetical protein HMPREF9056_02497 [Actinomyces sp. oral taxon
           170 str. F0386]
 gi|328525483|gb|EGF52529.1| hypothetical protein HMPREF9056_02497 [Actinomyces sp. oral taxon
           170 str. F0386]
          Length = 200

 Score = 37.7 bits (86), Expect = 0.73,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 50/150 (33%), Gaps = 16/150 (10%)

Query: 10  LFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYY---TTVVGDPEQQFSPLHPL 66
           L +DG N+ A+   LG  +  R+     R R   + AY     +    + E+  +     
Sbjct: 7   LLVDGENIDAT---LGMSVLGRRPEPEERPRWDRVLAYCDELSSADAAEGEEDEARALFF 63

Query: 67  LDWLHYNGFQVVAKVAKEFTENC-----GRKRVKSSMDVELAVDAFEQSEGLE-----HL 116
           L+    +      +                   +  +D+ +       +E  E     H+
Sbjct: 64  LNATSGHMPMSFIQALLAMDYRPVPLAGSGSNEEKVVDIGIQRTLEALAERAESGQEAHV 123

Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVL 146
           ++ S DG +   +  L +   +V I+    
Sbjct: 124 LLGSHDGDYIPQIERLLKAGAQVGILCFRE 153


>gi|326773081|ref|ZP_08232365.1| conserved hypothetical protein [Actinomyces viscosus C505]
 gi|326637713|gb|EGE38615.1| conserved hypothetical protein [Actinomyces viscosus C505]
          Length = 200

 Score = 37.7 bits (86), Expect = 0.79,   Method: Composition-based stats.
 Identities = 21/159 (13%), Positives = 44/159 (27%), Gaps = 34/159 (21%)

Query: 10  LFIDGANLYASSK--------ALGFDIDYRKLLKA---------FRSRAIVIRAYYYTTV 52
           L +DG N+ A+                 + ++L                   RA ++   
Sbjct: 7   LLVDGENIDATLGMSVLGRRPEPEERPRWDRVLAYCDELSSAGTAEGEGNEARALFFLNA 66

Query: 53  VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG 112
                         +  L    ++ V                +  +D+ +       +E 
Sbjct: 67  TSGHMP-----MSFIQALLAMDYRPVPL-------AGSGSNDEKVVDIGIQRTLEALAER 114

Query: 113 LE-----HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVL 146
            E     H+++ S DG +   +  L +   KV I+    
Sbjct: 115 AESGQEAHVLLGSHDGDYIPHIERLLQAGAKVGILCFRE 153


>gi|325066733|ref|ZP_08125406.1| hypothetical protein AoriK_02884 [Actinomyces oris K20]
          Length = 210

 Score = 37.7 bits (86), Expect = 0.80,   Method: Composition-based stats.
 Identities = 21/159 (13%), Positives = 44/159 (27%), Gaps = 34/159 (21%)

Query: 10  LFIDGANLYASSK--------ALGFDIDYRKLLKA---------FRSRAIVIRAYYYTTV 52
           L +DG N+ A+                 + ++L                   RA ++   
Sbjct: 17  LLVDGENIDATLGMSVLGRRPEPEERPRWDRVLAYCDELSSAGTAEGEGNEARALFFLNA 76

Query: 53  VGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEG 112
                         +  L    ++ V                +  +D+ +       +E 
Sbjct: 77  TSGHMP-----MSFIQALLAMDYRPVPL-------AGSGSNDEKVVDIGIQRTLEALAER 124

Query: 113 LE-----HLVIFSGDGCFTTLVAALQRKVKKVTIVSTVL 146
            E     H+++ S DG +   +  L +   KV I+    
Sbjct: 125 AESGQEAHVLLGSHDGDYIPHIERLLQAGAKVGILCFRE 163


>gi|222528190|ref|YP_002572072.1| 1-phosphofructokinase [Caldicellulosiruptor bescii DSM 6725]
 gi|222455037|gb|ACM59299.1| 1-phosphofructokinase [Caldicellulosiruptor bescii DSM 6725]
          Length = 315

 Score = 37.3 bits (85), Expect = 0.86,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 32/82 (39%), Gaps = 7/82 (8%)

Query: 66  LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG---- 121
           L+D L     ++V    K +T+           D+ L  D  ++    + + + SG    
Sbjct: 82  LVDGLTRTNIKIVETAQKVYTDLNQNGFEVKKKDINLLFDKIDRIAKTDDIFVLSGSLPP 141

Query: 122 --DGC-FTTLVAALQRKVKKVT 140
             D   +  L+  L+RK  KV 
Sbjct: 142 GTDEDVYVELIRMLKRKGAKVI 163


>gi|15240156|ref|NP_200926.1| unknown protein [Arabidopsis thaliana]
 gi|332010048|gb|AED97431.1| Putative endonuclease or glycosyl hydrolase [Arabidopsis thaliana]
          Length = 346

 Score = 37.3 bits (85), Expect = 0.87,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 54/162 (33%), Gaps = 16/162 (9%)

Query: 7   KIALFIDGAN--LYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTT---VVGDPEQQFS 61
           K +++ D  N  +       G     R +L        +   Y Y     +    +Q  S
Sbjct: 81  KTSVWWDIENCEVPKGCDPHGVAQSIRSVLSKSNFCGPLTI-YAYGDTNQIPSSVQQALS 139

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQS---EGLEHLVI 118
                L+ +      ++        +      VK   D +L VD    +   +   ++++
Sbjct: 140 STGVSLNHVPAVSNGLII--LYVLDDGEHLTGVKDGSDKKLLVDIMLWAMDNQAPANIML 197

Query: 119 FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160
            SGD  F+ L+  L  K   + +     + P  AS  L   A
Sbjct: 198 ISGDKDFSYLLHKLGMKRYNILL-----ARPEKASTPLIAAA 234


>gi|306837071|ref|ZP_07470013.1| conserved hypothetical protein [Corynebacterium accolens ATCC
           49726]
 gi|304567052|gb|EFM42675.1| conserved hypothetical protein [Corynebacterium accolens ATCC
           49726]
          Length = 197

 Score = 37.3 bits (85), Expect = 0.94,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 36/115 (31%), Gaps = 14/115 (12%)

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
           + P ++ +   GF V AK      ++     +             +  + L  +V+ S D
Sbjct: 67  IRPWVEAIRNVGFGVFAKPKIHEDDDVDPDMID---------HIEKLRDDLAGVVVASAD 117

Query: 123 G-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
           G  F  L+  L  +   VT++                    F+DL  +       
Sbjct: 118 GQNFQPLLEELIDEGLPVTVLGFHEHASWAVGHPEI----EFVDLEDIDGVFREP 168


>gi|115401736|ref|XP_001216456.1| predicted protein [Aspergillus terreus NIH2624]
 gi|114190397|gb|EAU32097.1| predicted protein [Aspergillus terreus NIH2624]
          Length = 280

 Score = 37.3 bits (85), Expect = 1.0,   Method: Composition-based stats.
 Identities = 22/162 (13%), Positives = 48/162 (29%), Gaps = 26/162 (16%)

Query: 8   IALFIDGANLYASSKALG-------------FDIDYRKLLKAFRSRAIV------IRAYY 48
           + ++ID  NL+   +                +  D  +L      +  +      ++   
Sbjct: 18  VCIYIDNTNLWIEGRKTYAKKKGLDTRTDPTWRFDVGRLKTTLLKKITLPSENVEVKTNL 77

Query: 49  YTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE 108
           Y +     +  +  +     ++H +           +T        + + D    V A  
Sbjct: 78  YGSRPPPVDTVWEAIKCHEVYIHTSKRST-------WTGGEKGVDQQPTADAAFQVSADY 130

Query: 109 QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS 150
            +E     +I SGD    + V  +      V + S   S  S
Sbjct: 131 YTEVSSEYIIVSGDRDLLSAVNKIADSGFPVHVWSWKDSLAS 172


>gi|317178073|dbj|BAJ55862.1| hypothetical protein HPF16_1265 [Helicobacter pylori F16]
          Length = 222

 Score = 37.3 bits (85), Expect = 1.0,   Method: Composition-based stats.
 Identities = 7/53 (13%), Positives = 22/53 (41%), Gaps = 2/53 (3%)

Query: 86  TENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136
            ++      +  +D+++ +D    +    ++ +V+ SGD  F       + + 
Sbjct: 136 NDDFIYHAKQKGVDIKIGLDIATLALKKLVQKIVLISGDSDFVPAAKLARVEG 188


>gi|227501911|ref|ZP_03931960.1| conserved hypothetical protein [Corynebacterium accolens ATCC
           49725]
 gi|227077405|gb|EEI15368.1| conserved hypothetical protein [Corynebacterium accolens ATCC
           49725]
          Length = 197

 Score = 37.3 bits (85), Expect = 1.0,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 36/115 (31%), Gaps = 14/115 (12%)

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGD 122
           + P ++ +   GF V AK      ++     +             +  + L  +V+ S D
Sbjct: 67  IRPWVEAIRNVGFGVFAKPKIHEDDDVDPDMID---------HIEKLRDDLAGVVVASAD 117

Query: 123 G-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
           G  F  L+  L  +   VT++                    F+DL  +       
Sbjct: 118 GQNFQPLLEELIDEGLPVTVLGFHEHASWAVGHPEID----FVDLEDIDGVFREP 168


>gi|227496350|ref|ZP_03926641.1| conserved hypothetical protein [Actinomyces urogenitalis DSM 15434]
 gi|226834126|gb|EEH66509.1| conserved hypothetical protein [Actinomyces urogenitalis DSM 15434]
          Length = 203

 Score = 37.3 bits (85), Expect = 1.0,   Method: Composition-based stats.
 Identities = 24/149 (16%), Positives = 51/149 (34%), Gaps = 15/149 (10%)

Query: 10  LFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDW 69
           L +DG N+ A+   LG  +  R+     R R   + ++  T    +   +    H L   
Sbjct: 11  LLVDGENIDAT---LGMSVLGRRPEPEERPRWDRVLSFCDTLSDQEAGGEDEDTHALFFL 67

Query: 70  LHYNGFQ-------VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLE-----HLV 117
              +G         ++A   +           +  +D+ +       +E +E      ++
Sbjct: 68  NATSGHMPMSFVQALLAMDYRPIPLAGSGNPEEKVVDIGIQRTLDALAERVESGLSAQVL 127

Query: 118 IFSGDGCFTTLVAALQRKVKKVTIVSTVL 146
           + S DG +   +  L     KV ++    
Sbjct: 128 LGSHDGDYIPQIERLLDAGAKVGVLCFKE 156


>gi|194289741|ref|YP_002005648.1| polysaccharide pyruvyl transferase [Cupriavidus taiwanensis LMG
           19424]
 gi|193223576|emb|CAQ69581.1| putative Polysaccharide pyruvyl transferase [Cupriavidus
           taiwanensis LMG 19424]
          Length = 409

 Score = 36.9 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 52/148 (35%), Gaps = 7/148 (4%)

Query: 14  GANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYN 73
           G N   +  ++G    + +L +   SR   + A  Y +V  +           L      
Sbjct: 127 GKNARVALVSVGVAAGWSRLGRYLVSRFFALAAPQYVSVRDE---SSRRNIVGLGAGEAC 183

Query: 74  GFQVVAKVAKEFTENCGRKRVKSSMDVELAV-DAFEQSEGLEHLVIF---SGDGCFTTLV 129
              ++   A           ++   DV + V D        + + +     G G F  LV
Sbjct: 184 DVAIIPDPAILSASLYAEHGLEKRWDVGICVSDVESLHYNADLVSVAEQGGGLGMFVELV 243

Query: 130 AALQRKVKKVTIVSTVLSDPSMASDQLR 157
             L++  ++V + +    + ++A+  +R
Sbjct: 244 HKLRQGGQRVVLFTNGAEEDNLAAAAVR 271


>gi|188528123|ref|YP_001910810.1| hypothetical protein HPSH_06900 [Helicobacter pylori Shi470]
 gi|188144363|gb|ACD48780.1| hypothetical protein HPSH_06900 [Helicobacter pylori Shi470]
          Length = 121

 Score = 36.9 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 7/53 (13%), Positives = 22/53 (41%), Gaps = 2/53 (3%)

Query: 86  TENCGRKRVKSSMDVELAVDAFEQSEG--LEHLVIFSGDGCFTTLVAALQRKV 136
            ++      +  +D+++ +D    +    ++ +V+ SGD  F       + + 
Sbjct: 34  NDDFIYHAKQKGVDIKIGLDIATLALKKLVQKIVLISGDSDFVPAAKLARVEG 86


>gi|255537067|ref|XP_002509600.1| nucleic acid binding protein, putative [Ricinus communis]
 gi|223549499|gb|EEF50987.1| nucleic acid binding protein, putative [Ricinus communis]
          Length = 375

 Score = 36.9 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 32/84 (38%), Gaps = 11/84 (13%)

Query: 97  SMDVEL---AVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMAS 153
           + DV L    VD  +     E LV+ S D  F  ++   + +  K  +V  +        
Sbjct: 219 AADVALREHIVDMMD-KRRAECLVLVSDDSDFVGVLKEAKLRCVKTVVVGDINDG----- 272

Query: 154 DQLRRQAD-YFMDLAYLKNEIARD 176
             L+R AD  F     L  +  ++
Sbjct: 273 -ALKRVADAEFSWQEILMGKAKKE 295


>gi|156553899|ref|XP_001601444.1| PREDICTED: similar to ENSANGP00000010457 [Nasonia vitripennis]
          Length = 390

 Score = 36.9 bits (84), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 42/134 (31%), Gaps = 9/134 (6%)

Query: 11  FIDG----ANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           FID      N            +Y KL +  + +  +I     T       +       L
Sbjct: 93  FIDTGQRPQNFIRDVGLADRFEEYPKLRELIKLKDDLI---SETATPPMYLKTDLFAQNL 149

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVK-SSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
            D        ++    +E+   CG   V+  + D  + +D  E +     + ++ G    
Sbjct: 150 KDLNCKFDVILIEPPLEEYQRTCGATNVQLWNWDQIMELDIGEVAANRSFVFLWCGSSDG 209

Query: 126 TTLVAA-LQRKVKK 138
             +    L++   +
Sbjct: 210 LDMGRFCLRKWGFR 223


>gi|256371062|ref|YP_003108886.1| hypothetical protein Afer_0244 [Acidimicrobium ferrooxidans DSM
           10331]
 gi|256007646|gb|ACU53213.1| conserved hypothetical protein [Acidimicrobium ferrooxidans DSM
           10331]
          Length = 189

 Score = 36.9 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 20/147 (13%), Positives = 38/147 (25%), Gaps = 20/147 (13%)

Query: 10  LFIDGANLYASSKA-LGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLD 68
           L +DG N+       LG   +  +            R  +            +PL     
Sbjct: 8   LLVDGENIDGVLGQILGHRPEPNE------------RPRWDRVAGAAASWGSAPLKSYFF 55

Query: 69  WLHYNGFQVVAKVAKEFTENCGRKRV-----KSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
               +G  ++     +   + G   V        +D  +     E       +V+ S D 
Sbjct: 56  INATSG--LIPGPFIQAIRSHGYTPVLLSGPGKVVDDAIVATLGEIGRRHGSVVLASHDA 113

Query: 124 CFTTLVAALQRKVKKVTIVSTVLSDPS 150
            F   +  L     +V +         
Sbjct: 114 DFAPALEQLLDHGHRVALACFTEYVAG 140


>gi|256833264|ref|YP_003161991.1| hypothetical protein Jden_2050 [Jonesia denitrificans DSM 20603]
 gi|256686795|gb|ACV09688.1| conserved hypothetical protein [Jonesia denitrificans DSM 20603]
          Length = 192

 Score = 36.9 bits (84), Expect = 1.3,   Method: Composition-based stats.
 Identities = 22/168 (13%), Positives = 49/168 (29%), Gaps = 24/168 (14%)

Query: 10  LFIDGANLYASS----KALGFDIDYRKLLKAFRSR-----AIVIRAYYYTTVVGDPEQQF 60
           L +DG N+ A+          + D R                 +   ++           
Sbjct: 14  LLVDGENIDATLGMNVLGHRPNPDERPRWDRISEFARELWGQSVTKLFFLNASSGQMP-- 71

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
               P +  L    ++ +             +  +  +D+ +        +    +++ S
Sbjct: 72  ---MPFVQALLAMDYRPIPL---------SGENHEKVVDMGIQRTLDAIRDRDADVLLAS 119

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
            DG F   + AL    +KV ++       +  +  L  +   F DL  
Sbjct: 120 HDGDFIPQIEALLDGTRKVGLLCFREFVNAQMAQ-LEDKGLTFYDLED 166


>gi|323439278|gb|EGA97003.1| hypothetical protein SAO11_1871 [Staphylococcus aureus O11]
 gi|323442519|gb|EGB00147.1| hypothetical protein SAO46_1439 [Staphylococcus aureus O46]
          Length = 78

 Score = 36.5 bits (83), Expect = 1.4,   Method: Composition-based stats.
 Identities = 9/65 (13%), Positives = 23/65 (35%), Gaps = 2/65 (3%)

Query: 100 VELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQL--R 157
           + L + +      ++ +++ +GD  F       + +     + S      +  S  +  R
Sbjct: 3   IGLDIASLSFKHQVDKIILIAGDSDFVPAAKLARTEGIDFVLDSLGADIRNNLSLHIDGR 62

Query: 158 RQADY 162
           R  D 
Sbjct: 63  RTCDE 67


>gi|224541746|ref|ZP_03682285.1| hypothetical protein CATMIT_00918 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525350|gb|EEF94455.1| hypothetical protein CATMIT_00918 [Catenibacterium mitsuokai DSM
           15897]
          Length = 716

 Score = 36.5 bits (83), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/140 (14%), Positives = 41/140 (29%), Gaps = 12/140 (8%)

Query: 26  FDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEF 85
             I+  K++         I   YY     D   +   L    +W    G++   K     
Sbjct: 457 KKINNMKMMPFAPLFRETIAPVYYRRKREDVLSELPELLENEEWCE-MGYEEQCKYYDSL 515

Query: 86  TENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTV 145
           ++                 +  + S  ++ L   S       ++   + + +KV + S  
Sbjct: 516 SKGGHNHH-----------EIRQVSWRVDDLHDSSKACRMLEIIQEAKEEGRKVIVFSFY 564

Query: 146 LSDPSMASDQLRRQADYFMD 165
           L      S  L  Q    ++
Sbjct: 565 LDTIRKISKLLGNQCTEIIN 584


>gi|329296618|ref|ZP_08253954.1| pyrimidine utilization protein B [Plautia stali symbiont]
          Length = 236

 Score = 36.5 bits (83), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/145 (14%), Positives = 44/145 (30%), Gaps = 9/145 (6%)

Query: 10  LFIDGANLYASSKAL----GFDIDYRK-LLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLH 64
           + +D  N YAS        GFD+   + ++          RA     +          + 
Sbjct: 34  IVVDMQNAYASQGGYLDLAGFDVSATQPVIARIHQAVTAARAAGMQIIWFQNGWDNQYVE 93

Query: 65  PLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGC 124
                          K  ++  E  G    K   D  L  +   Q+   + ++       
Sbjct: 94  ADDAGSPNFHKSNALKTMRQRPELHGTLLAKGGWDYALVDELVPQAG--DIVLPKPRYSG 151

Query: 125 F--TTLVAALQRKVKKVTIVSTVLS 147
           F  T L + L+ +  +  + + + +
Sbjct: 152 FFNTPLDSMLRSRGIRHLVFTGIAT 176


>gi|56476616|ref|YP_158205.1| hypothetical protein ebB63 [Aromatoleum aromaticum EbN1]
 gi|56312659|emb|CAI07304.1| hypothetical protein ebB63 [Aromatoleum aromaticum EbN1]
          Length = 90

 Score = 36.5 bits (83), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 28/79 (35%), Gaps = 12/79 (15%)

Query: 100 VELAVDA--FEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLR 157
           + + +D       +  + +V+ +GD  F       +R+  +  +           +D L 
Sbjct: 1   MRIGLDIASLTLKKQADTIVLVAGDSDFVPAAQLARREGMEFIL----DPLWQKVNDDL- 55

Query: 158 RQADYFMDLAYLKNEIARD 176
                F  +  L++ + R 
Sbjct: 56  -----FEHIDGLQSGLKRP 69


>gi|48138147|ref|XP_393391.1| PREDICTED: methyltransferase-like protein 14 homolog [Apis
           mellifera]
          Length = 390

 Score = 36.5 bits (83), Expect = 1.6,   Method: Composition-based stats.
 Identities = 19/134 (14%), Positives = 43/134 (32%), Gaps = 9/134 (6%)

Query: 11  FIDG----ANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           FID      N            +Y KL +  + +  +I     T       +     + L
Sbjct: 93  FIDTGQRPQNFIRDVGLADRFEEYPKLRELIKLKDDLI---AETATPPMYLKTDLLSYNL 149

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVK-SSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
            +        ++    +E+   CG   V+  + D  + +D  E +     + ++ G    
Sbjct: 150 KELNCKFDVILIEPPLEEYQRTCGATNVQLWNWDQIMELDIGEVAANRSFVFLWCGSSDG 209

Query: 126 TTLVAA-LQRKVKK 138
             +    L++   +
Sbjct: 210 LDMGRFCLRKWGFR 223


>gi|114563957|ref|YP_751471.1| NAD(+) kinase [Shewanella frigidimarina NCIMB 400]
 gi|122299140|sp|Q07ZD2|PPNK_SHEFN RecName: Full=Probable inorganic polyphosphate/ATP-NAD kinase;
           Short=Poly(P)/ATP NAD kinase
 gi|114335250|gb|ABI72632.1| NAD(+) kinase [Shewanella frigidimarina NCIMB 400]
          Length = 309

 Score = 36.5 bits (83), Expect = 1.6,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 29/77 (37%), Gaps = 10/77 (12%)

Query: 66  LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
           L  WL   GF+V+ +         GR   +   DV  ++D  E  E  +  ++  GDG  
Sbjct: 43  LHHWLSMQGFKVIVE---------GRVSAELGADVC-SMDLLEMGEHCDLAIVVGGDGNM 92

Query: 126 TTLVAALQRKVKKVTIV 142
                 L R    V  V
Sbjct: 93  LGAARVLARFNVAVIGV 109


>gi|302870855|ref|YP_003839491.1| 1-phosphofructokinase [Caldicellulosiruptor obsidiansis OB47]
 gi|302573714|gb|ADL41505.1| 1-phosphofructokinase [Caldicellulosiruptor obsidiansis OB47]
          Length = 311

 Score = 36.2 bits (82), Expect = 1.9,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 52/139 (37%), Gaps = 15/139 (10%)

Query: 25  GFDIDYRKLLKAFRSRAIVI------RAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVV 78
           G  I+  K++KA   ++I +         ++   + D +  F  +   +D L     ++V
Sbjct: 37  GKGINVSKVIKALGGQSIALGFLGNDNKDWFLKYLKDMQIDFDFI--FVDGLTRTNIKIV 94

Query: 79  AKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG------DGC-FTTLVAA 131
               K +T+           D+ L  +  ++    + + + SG      D   +  L+  
Sbjct: 95  ETAQKVYTDLNQNGFEVKKKDISLLFEKIDRIAKTDDIFVLSGSLPPGADEDVYVELIRM 154

Query: 132 LQRKVKKVTIVSTVLSDPS 150
           L++K  KV   +   +   
Sbjct: 155 LKQKGAKVIFDADGKALER 173


>gi|328956174|ref|YP_004373507.1| hypothetical protein Corgl_1593 [Coriobacterium glomerans PW2]
 gi|328456498|gb|AEB07692.1| hypothetical protein Corgl_1593 [Coriobacterium glomerans PW2]
          Length = 461

 Score = 36.2 bits (82), Expect = 1.9,   Method: Composition-based stats.
 Identities = 10/89 (11%), Positives = 20/89 (22%), Gaps = 14/89 (15%)

Query: 50  TTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQ 109
                     +     + +  H  G +             G      +  + + +D    
Sbjct: 84  FDWSAPNPAWWERARTMCEMAHDRGIRPALV-LIWCNYVPGTWASDMAASIGIEIDLMPI 142

Query: 110 S-------------EGLEHLVIFSGDGCF 125
           S                + + I SGD  F
Sbjct: 143 SEALRHIERVVHELGRFDPIYIVSGDTDF 171


>gi|224074705|ref|XP_002304433.1| predicted protein [Populus trichocarpa]
 gi|222841865|gb|EEE79412.1| predicted protein [Populus trichocarpa]
          Length = 300

 Score = 36.2 bits (82), Expect = 1.9,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 26/68 (38%), Gaps = 10/68 (14%)

Query: 97  SMDVEL---AVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMAS 153
           + DV L    VD  +     E  V+ S D  F  ++   + +  K  +V  V        
Sbjct: 134 AADVALKDHMVDMMD-KRRAECFVLVSDDSDFVHVLKEAKSRCLKTVVVGDVNDG----- 187

Query: 154 DQLRRQAD 161
             L+R AD
Sbjct: 188 -ALKRVAD 194


>gi|226947166|ref|YP_002802239.1| glucosamine--fructose-6-phosphate aminotransferase [Azotobacter
           vinelandii DJ]
 gi|226722093|gb|ACO81264.1| glucosamine--fructose-6-phosphate aminotransferase, isomerizing;
           GlmS [Azotobacter vinelandii DJ]
          Length = 611

 Score = 36.2 bits (82), Expect = 2.2,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 63/196 (32%), Gaps = 37/196 (18%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           +A+ ID A   A  +  G   +  + L+A      +  A+      G P ++ +  H   
Sbjct: 34  VAV-IDAAGQLARCRRSGKIAELEQALRAAPLAGRLGIAHTRWATHGAPLERNAHPHCSA 92

Query: 68  D--WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
               + +NG        +E  +  G +  +S  D E+ V                  G  
Sbjct: 93  GEVAVVHNGIIENYLQLRERLQGLGYRF-ESDTDTEVIVHLLHHKLQET--------GDL 143

Query: 126 TTLVAALQ-----RKVKKVT-----------------IVSTVLSDPSMASD--QLRRQAD 161
           TT + A+           V                  ++     +  +ASD   LR+  D
Sbjct: 144 TTALKAIIPELHGAYGLAVIGAGQPDRLLAARSGSPLVIGLGHGENFLASDQIALRQVTD 203

Query: 162 YFMDLAY-LKNEIARD 176
            F+ L      EI RD
Sbjct: 204 RFVYLEEGDIAEIRRD 219


>gi|296242346|ref|YP_003649833.1| hypothetical protein Tagg_0608 [Thermosphaera aggregans DSM 11486]
 gi|296094930|gb|ADG90881.1| hypothetical protein Tagg_0608 [Thermosphaera aggregans DSM 11486]
          Length = 302

 Score = 36.2 bits (82), Expect = 2.2,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 26/72 (36%), Gaps = 10/72 (13%)

Query: 114 EHLVI--FSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMD--LAYL 169
           + +VI   S D  FT     LQ      T+ +++       S   R   D F    L  L
Sbjct: 78  DTVVIEGVSEDMDFTVYCKILQ---VFYTVDTSIKVVCKGVS---RDICDKFFTPILDEL 131

Query: 170 KNEIARDPDEDK 181
           +  I + P E  
Sbjct: 132 REYIVKAPKEKP 143


>gi|332022437|gb|EGI62745.1| Methyltransferase-like protein 14-like protein [Acromyrmex
           echinatior]
          Length = 392

 Score = 35.8 bits (81), Expect = 2.4,   Method: Composition-based stats.
 Identities = 19/134 (14%), Positives = 43/134 (32%), Gaps = 9/134 (6%)

Query: 11  FIDG----ANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           FID      N            +Y KL +  + +  +I     T       +     + L
Sbjct: 95  FIDTGQRPQNFIRDVGLADRFEEYPKLRELIKLKDDLI---AETATPPMYLKTDLLSYNL 151

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVK-SSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
            +        ++    +E+   CG   V+  + D  + +D  E +     + ++ G    
Sbjct: 152 KELNCKFDVILIEPPLEEYQRTCGATNVQLWNWDQIMELDIGEVAANRSFVFLWCGSSDG 211

Query: 126 TTLVAA-LQRKVKK 138
             +    L++   +
Sbjct: 212 LDMGRFCLRKWGFR 225


>gi|297809527|ref|XP_002872647.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
 gi|297318484|gb|EFH48906.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 365

 Score = 35.8 bits (81), Expect = 2.5,   Method: Composition-based stats.
 Identities = 10/58 (17%), Positives = 23/58 (39%), Gaps = 7/58 (12%)

Query: 104 VDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
           VD  +    +E +V+ S D  +  ++   + +  +  ++             L+R AD
Sbjct: 217 VDMMD-KREVECVVLVSDDSDYAGILWEAKERCLRTVVIGDSNEG------ALKRVAD 267


>gi|156552882|ref|XP_001600832.1| PREDICTED: similar to limkain b1 [Nasonia vitripennis]
          Length = 1443

 Score = 35.8 bits (81), Expect = 2.6,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 56/173 (32%), Gaps = 20/173 (11%)

Query: 8   IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLL 67
           I +F D  N           +  R +   F +         +  V    ++    +  L 
Sbjct: 214 IGVFWDIENCQVPKGRSAMAVT-RVIRDKFFNGYK---EAEFIVVCDVQKENKQIVQELN 269

Query: 68  DWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTT 127
           D              K   +   R+ ++   D   +  A         +++ SGD  F  
Sbjct: 270 DAQVDLIHVSATC--KNAADEKLRQSIRRFADTHGSPAA---------IILISGDINFAG 318

Query: 128 LVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEI-ARDPDE 179
            ++ L+ + KK+ ++   L      S+ L   AD   D   L   + +R P +
Sbjct: 319 DLSDLRHR-KKIHVI---LLHKENTSEALILCADEHYDFTKLLQPLPSRTPSK 367


>gi|124004764|ref|ZP_01689608.1| hypothetical protein M23134_01476 [Microscilla marina ATCC 23134]
 gi|123989887|gb|EAY29416.1| hypothetical protein M23134_01476 [Microscilla marina ATCC 23134]
          Length = 55

 Score = 35.8 bits (81), Expect = 2.6,   Method: Composition-based stats.
 Identities = 8/50 (16%), Positives = 23/50 (46%)

Query: 8  IALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPE 57
            +FID  N++   ++ G+ +D+ K +   + +    +   +   + + E
Sbjct: 6  TVVFIDTQNVHLGIQSCGWLLDWAKFMTLLKDKFKADKVCMFLGYLSEYE 55


>gi|296446363|ref|ZP_06888308.1| Radical SAM domain protein [Methylosinus trichosporium OB3b]
 gi|296256136|gb|EFH03218.1| Radical SAM domain protein [Methylosinus trichosporium OB3b]
          Length = 517

 Score = 35.8 bits (81), Expect = 2.7,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 31/85 (36%), Gaps = 11/85 (12%)

Query: 97  SMDVELA------VDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPS 150
            +D+E+       VD    +E +      S       L    +R+ KKV I        S
Sbjct: 47  DLDIEICDEGVAPVDLDHPAEWIAITGKVSQRRRMIALADEFRRRGKKVII---GGPYAS 103

Query: 151 MASDQLRRQADYFM--DLAYLKNEI 173
           ++ D LR   D  +  +   +  EI
Sbjct: 104 LSPDHLRDHCDVLVCGEAEEIAGEI 128


>gi|50084811|ref|YP_046321.1| 2,4-dienoyl-CoA reductase [Acinetobacter sp. ADP1]
 gi|49530787|emb|CAG68499.1| 2,4-dienoyl-CoA reductase [Acinetobacter sp. ADP1]
          Length = 674

 Score = 35.8 bits (81), Expect = 2.7,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 34/91 (37%), Gaps = 4/91 (4%)

Query: 69  WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTL 128
           W+H  G +      K        K     + + +   A      ++++VI +G   +T +
Sbjct: 580 WIHRTGLKHRN--VKMIAGASYEKIDDQGLHIMIGDKATVL--EVDNVVICAGQESYTAM 635

Query: 129 VAALQRKVKKVTIVSTVLSDPSMASDQLRRQ 159
             AL+   K V ++        + + +  RQ
Sbjct: 636 YEALRESGKNVHLIGGAKEAGELDAKRAIRQ 666


>gi|326775720|ref|ZP_08234985.1| allantoinase [Streptomyces cf. griseus XylebKG-1]
 gi|326656053|gb|EGE40899.1| allantoinase [Streptomyces cf. griseus XylebKG-1]
          Length = 447

 Score = 35.8 bits (81), Expect = 2.8,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 3/63 (4%)

Query: 101 ELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160
            L   A   +  +  L + S D     L+AA +R+  +VT+ S      ++ ++++   A
Sbjct: 224 GLIAHAKRLNARVHVLHLSSSDA--LPLIAAAKREGVRVTVESCPHFL-TLTAEEVPDGA 280

Query: 161 DYF 163
             F
Sbjct: 281 TEF 283


>gi|291448775|ref|ZP_06588165.1| allantoinase [Streptomyces roseosporus NRRL 15998]
 gi|291351722|gb|EFE78626.1| allantoinase [Streptomyces roseosporus NRRL 15998]
          Length = 444

 Score = 35.8 bits (81), Expect = 2.8,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 3/63 (4%)

Query: 101 ELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160
            L   A   +  +  L + S D     L+AA +R+  +VT+ S      ++ ++++   A
Sbjct: 221 GLIAHAKRLNARVHVLHLSSSDA--LPLIAAAKREGVRVTVESCPHFL-TLTAEEVPDGA 277

Query: 161 DYF 163
             F
Sbjct: 278 TEF 280


>gi|239945313|ref|ZP_04697250.1| putative allantoinase [Streptomyces roseosporus NRRL 15998]
 gi|239991772|ref|ZP_04712436.1| putative allantoinase [Streptomyces roseosporus NRRL 11379]
          Length = 447

 Score = 35.8 bits (81), Expect = 2.8,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 3/63 (4%)

Query: 101 ELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160
            L   A   +  +  L + S D     L+AA +R+  +VT+ S      ++ ++++   A
Sbjct: 224 GLIAHAKRLNARVHVLHLSSSDA--LPLIAAAKREGVRVTVESCPHFL-TLTAEEVPDGA 280

Query: 161 DYF 163
             F
Sbjct: 281 TEF 283


>gi|182435082|ref|YP_001822801.1| putative allantoinase [Streptomyces griseus subsp. griseus NBRC
           13350]
 gi|178463598|dbj|BAG18118.1| putative allantoinase [Streptomyces griseus subsp. griseus NBRC
           13350]
          Length = 447

 Score = 35.8 bits (81), Expect = 2.8,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 3/63 (4%)

Query: 101 ELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160
            L   A   +  +  L + S D     L+AA +R+  +VT+ S      ++ ++++   A
Sbjct: 224 GLIAHAKRLNARVHVLHLSSSDA--LPLIAAAKREGVRVTVESCPHFL-TLTAEEVPDGA 280

Query: 161 DYF 163
             F
Sbjct: 281 TEF 283


>gi|84496671|ref|ZP_00995525.1| hypothetical protein JNB_04090 [Janibacter sp. HTCC2649]
 gi|84383439|gb|EAP99320.1| hypothetical protein JNB_04090 [Janibacter sp. HTCC2649]
          Length = 198

 Score = 35.8 bits (81), Expect = 2.8,   Method: Composition-based stats.
 Identities = 23/145 (15%), Positives = 44/145 (30%), Gaps = 22/145 (15%)

Query: 10  LFIDGANLYASSK--------ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
           + +DG N+ A+                 + +LL   R          +           S
Sbjct: 21  VLVDGENIDATLGTSILGRRPQPDERPRWDRLLSFARDTWDQDVKGLFFLNAST-----S 75

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
                +  L+  GF  V           G   VK  +DV +        +    +++ S 
Sbjct: 76  MPMSFIQALNALGFTPVPL--------SGDADVKV-VDVAIQKTLRAIRDRDADVMLVSH 126

Query: 122 DGCFTTLVAALQRKVKKVTIVSTVL 146
           DG F   +  L    ++V +++   
Sbjct: 127 DGDFLEEIEGLLDDDRRVGVMAFRE 151


>gi|302798865|ref|XP_002981192.1| hypothetical protein SELMODRAFT_113855 [Selaginella moellendorffii]
 gi|300151246|gb|EFJ17893.1| hypothetical protein SELMODRAFT_113855 [Selaginella moellendorffii]
          Length = 127

 Score = 35.4 bits (80), Expect = 3.1,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 45/140 (32%), Gaps = 27/140 (19%)

Query: 1   MFDPREKIALFIDGANLYASSKALGFDI--DYRKLLKAFRSRAIVIRAYYYTTVVGDPEQ 58
           M     K +++ D  N    +    F I  +   +L AF     +  + Y          
Sbjct: 5   MEASVAKTSVWWDIENCRPPADVNPFHIARNISNVLHAFNFFGPLTISAY--------GD 56

Query: 59  QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA---FEQSEGLEH 115
            +     + + L   G  +                  S+ D  + ++       +    +
Sbjct: 57  TYQLTRHVQNALTSTGISLNHIP--------------SASDKAILMNMAFWTSDNPPPAN 102

Query: 116 LVIFSGDGCFTTLVAALQRK 135
           +V+ SGD  F+ L+  LQ K
Sbjct: 103 VVLISGDQDFSPLLHRLQMK 122


>gi|237751636|ref|ZP_04582116.1| predicted protein [Helicobacter bilis ATCC 43879]
 gi|229373002|gb|EEO23393.1| predicted protein [Helicobacter bilis ATCC 43879]
          Length = 206

 Score = 35.4 bits (80), Expect = 3.1,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 48/165 (29%), Gaps = 34/165 (20%)

Query: 6   EKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHP 65
           + +ALFID   L A+   L    DY +          +     Y T              
Sbjct: 3   KNLALFIDCDRLEAAFMTL--IFDYLQ-----NEGYNICVKRAYITKDNLDLWYSQLDRH 55

Query: 66  LLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE--QSEGLEHLVIFSGDG 123
                  N                     +++ ++ L+VD  +   S   + + I S   
Sbjct: 56  YFRISIGN--------------------SQANNNMRLSVDVSKALYSGNYDSIAIASNYR 95

Query: 124 CFTTLVAALQRKVKKVTIVS-TVLSDPSMASDQLRRQADYFMDLA 167
            F  L + ++ K  +          + +     L+R  +   +L 
Sbjct: 96  EFGVLASEVRTKGLEALCFYQFSKGNEAF----LKRAYNIIYNLE 136


>gi|255324145|ref|ZP_05365269.1| conserved hypothetical protein [Corynebacterium tuberculostearicum
           SK141]
 gi|311740400|ref|ZP_07714229.1| conserved hypothetical protein [Corynebacterium pseudogenitalium
           ATCC 33035]
 gi|255298846|gb|EET78139.1| conserved hypothetical protein [Corynebacterium tuberculostearicum
           SK141]
 gi|311304584|gb|EFQ80658.1| conserved hypothetical protein [Corynebacterium pseudogenitalium
           ATCC 33035]
          Length = 197

 Score = 35.4 bits (80), Expect = 3.2,   Method: Composition-based stats.
 Identities = 30/180 (16%), Positives = 52/180 (28%), Gaps = 29/180 (16%)

Query: 10  LFIDGANLYASSKAL---------GFDID-YRKLLKAFRSRAIVI-RAYYYTTVVGDPEQ 58
           L  D  N+     +L             D   + L           RA  +T V      
Sbjct: 6   LVWDAPNMDMGLGSLLGGRPTAAHRPRFDAIGRWLVHLAQDVDAEPRADVFTNVTPGGAD 65

Query: 59  QFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVI 118
               + P ++ +   GF V AK      ++     +                E L  +++
Sbjct: 66  ---VIRPWVEAIRNVGFGVFAKPKIHEDDDVDPDMLD---------HIESLREDLAGVIV 113

Query: 119 FSGDG-CFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARDP 177
            S DG  F   +  L  +   VT++                    F+DL  ++    R+P
Sbjct: 114 ASADGQNFQEPLEELIAEGLPVTVLGFHEHAAWAVGHADIN----FVDLEDIEGVF-REP 168


>gi|262279291|ref|ZP_06057076.1| 2,4-dienoyl-CoA reductase [Acinetobacter calcoaceticus RUH2202]
 gi|262259642|gb|EEY78375.1| 2,4-dienoyl-CoA reductase [Acinetobacter calcoaceticus RUH2202]
          Length = 674

 Score = 35.4 bits (80), Expect = 3.2,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 25/59 (42%)

Query: 101 ELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQ 159
            + +D       ++H+VI +G   FT +   L+   K V ++        + + +  RQ
Sbjct: 608 HITIDGKPSVLEVDHVVICAGQESFTAMYEQLKEDGKNVHLIGGAKEAGELDAKRAIRQ 666


>gi|170020255|ref|YP_001725209.1| ATP-dependent RNA helicase HrpA [Escherichia coli ATCC 8739]
 gi|169755183|gb|ACA77882.1| ATP-dependent helicase HrpA [Escherichia coli ATCC 8739]
          Length = 1300

 Score = 35.4 bits (80), Expect = 3.4,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 41/120 (34%), Gaps = 4/120 (3%)

Query: 22  KALGFDIDYRKLLKAFRSRAIV-IRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAK 80
           ++L  D     L +    R  + I     T       + F+    +         +V  +
Sbjct: 202 RSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYR 261

Query: 81  VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVT 140
              E  ++  R ++++  D   AVD   Q    + L+  SG+        AL +   + T
Sbjct: 262 PIVEEADDTERDQLQAIFD---AVDELSQESHGDILIFMSGEREIRDTADALNKLNLRHT 318


>gi|315082256|gb|EFT54232.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL078PA1]
          Length = 497

 Score = 35.4 bits (80), Expect = 3.4,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 37/106 (34%), Gaps = 15/106 (14%)

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S L  LL   +  G++          +    K  ++ MDV    DA      LEH     
Sbjct: 78  SRLQMLLRGQNLLGYRHYNDEVV---DKFVEKSAENGMDVFRVFDALNDPRNLEH----- 129

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
                   +AA+++  K         + P    +   +QAD  +D+
Sbjct: 130 -------AMAAVKKTGKHAQGTICYTTSPIHTPESFVKQADRLIDM 168


>gi|314968745|gb|EFT12843.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL037PA1]
          Length = 497

 Score = 35.4 bits (80), Expect = 3.4,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 37/106 (34%), Gaps = 15/106 (14%)

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S L  LL   +  G++          +    K  ++ MDV    DA      LEH     
Sbjct: 78  SRLQMLLRGQNLLGYRHYNDEVV---DKFVEKSAENGMDVFRVFDALNDPRNLEH----- 129

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
                   +AA+++  K         + P    +   +QAD  +D+
Sbjct: 130 -------AMAAVKKTGKHAQGTICYTTSPIHTPESFVKQADRLIDM 168


>gi|313836417|gb|EFS74131.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL037PA2]
 gi|314928882|gb|EFS92713.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL044PA1]
 gi|314971240|gb|EFT15338.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL037PA3]
 gi|328906375|gb|EGG26150.1| HMGL-like protein [Propionibacterium sp. P08]
          Length = 497

 Score = 35.4 bits (80), Expect = 3.4,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 37/106 (34%), Gaps = 15/106 (14%)

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S L  LL   +  G++          +    K  ++ MDV    DA      LEH     
Sbjct: 78  SRLQMLLRGQNLLGYRHYNDEVV---DKFVEKSAENGMDVFRVFDALNDPRNLEH----- 129

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
                   +AA+++  K         + P    +   +QAD  +D+
Sbjct: 130 -------AMAAVKKTGKHAQGTICYTTSPIHTPESFVKQADRLIDM 168


>gi|313829830|gb|EFS67544.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL063PA2]
          Length = 497

 Score = 35.4 bits (80), Expect = 3.4,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 37/106 (34%), Gaps = 15/106 (14%)

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S L  LL   +  G++          +    K  ++ MDV    DA      LEH     
Sbjct: 78  SRLQMLLRGQNLLGYRHYNDEVV---DKFVEKSAENGMDVFRVFDALNDPRNLEH----- 129

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
                   +AA+++  K         + P    +   +QAD  +D+
Sbjct: 130 -------AMAAVKKTGKHAQGTICYTTSPIHTPESFVKQADRLIDM 168


>gi|282854788|ref|ZP_06264122.1| HMGL-like protein [Propionibacterium acnes J139]
 gi|289425765|ref|ZP_06427520.1| HMGL-like protein [Propionibacterium acnes SK187]
 gi|289428002|ref|ZP_06429706.1| HMGL-like protein [Propionibacterium acnes J165]
 gi|295131536|ref|YP_003582199.1| Methylmalonyl-CoA:Pyruvate transcarboxylase 5S subunit
           [Propionibacterium acnes SK137]
 gi|282581934|gb|EFB87317.1| HMGL-like protein [Propionibacterium acnes J139]
 gi|289153871|gb|EFD02577.1| HMGL-like protein [Propionibacterium acnes SK187]
 gi|289158885|gb|EFD07085.1| HMGL-like protein [Propionibacterium acnes J165]
 gi|291375313|gb|ADD99167.1| Methylmalonyl-CoA:Pyruvate transcarboxylase 5S subunit
           [Propionibacterium acnes SK137]
 gi|313763813|gb|EFS35177.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL013PA1]
 gi|313771676|gb|EFS37642.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL074PA1]
 gi|313793794|gb|EFS41825.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL110PA1]
 gi|313803108|gb|EFS44316.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL110PA2]
 gi|313808321|gb|EFS46792.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL087PA2]
 gi|313810499|gb|EFS48213.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL083PA1]
 gi|313813867|gb|EFS51581.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL025PA1]
 gi|313817024|gb|EFS54738.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL059PA1]
 gi|313818061|gb|EFS55775.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL046PA2]
 gi|313820920|gb|EFS58634.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL036PA1]
 gi|313824010|gb|EFS61724.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL036PA2]
 gi|313827056|gb|EFS64770.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL063PA1]
 gi|313831539|gb|EFS69253.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL007PA1]
 gi|313832526|gb|EFS70240.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL056PA1]
 gi|313839267|gb|EFS76981.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL086PA1]
 gi|314916593|gb|EFS80424.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL005PA4]
 gi|314918935|gb|EFS82766.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL050PA1]
 gi|314920956|gb|EFS84787.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL050PA3]
 gi|314924469|gb|EFS88300.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL001PA1]
 gi|314926947|gb|EFS90778.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL036PA3]
 gi|314932362|gb|EFS96193.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL067PA1]
 gi|314956671|gb|EFT00923.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL027PA1]
 gi|314961766|gb|EFT05867.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL002PA2]
 gi|314964750|gb|EFT08850.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL082PA1]
 gi|314967319|gb|EFT11418.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL082PA2]
 gi|314974891|gb|EFT18986.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL053PA1]
 gi|314978016|gb|EFT22110.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL045PA1]
 gi|314981710|gb|EFT25803.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL110PA3]
 gi|314984572|gb|EFT28664.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL005PA1]
 gi|314988232|gb|EFT32323.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL005PA2]
 gi|314990319|gb|EFT34410.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL005PA3]
 gi|315079281|gb|EFT51284.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL053PA2]
 gi|315087415|gb|EFT59391.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL002PA3]
 gi|315089831|gb|EFT61807.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL072PA1]
 gi|315092475|gb|EFT64451.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL110PA4]
 gi|315094719|gb|EFT66695.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL060PA1]
 gi|315095494|gb|EFT67470.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL038PA1]
 gi|315100133|gb|EFT72109.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL059PA2]
 gi|315102455|gb|EFT74431.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL046PA1]
 gi|315102879|gb|EFT74855.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL050PA2]
 gi|315109628|gb|EFT81604.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL030PA2]
 gi|327326505|gb|EGE68293.1| oxaloacetate decarboxylase, alpha subunit [Propionibacterium acnes
           HL096PA3]
 gi|327328565|gb|EGE70325.1| oxaloacetate decarboxylase, alpha subunit [Propionibacterium acnes
           HL103PA1]
 gi|327332772|gb|EGE74504.1| oxaloacetate decarboxylase, alpha subunit [Propionibacterium acnes
           HL096PA2]
 gi|327335164|gb|EGE76874.1| oxaloacetate decarboxylase, alpha subunit [Propionibacterium acnes
           HL097PA1]
 gi|327448392|gb|EGE95046.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL043PA2]
 gi|327448467|gb|EGE95121.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL043PA1]
 gi|327449674|gb|EGE96328.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL013PA2]
 gi|327455778|gb|EGF02433.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL087PA3]
 gi|327456126|gb|EGF02781.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL092PA1]
 gi|327457924|gb|EGF04579.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL083PA2]
 gi|328757094|gb|EGF70710.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL087PA1]
 gi|328757289|gb|EGF70905.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL020PA1]
 gi|328757472|gb|EGF71088.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL025PA2]
 gi|328762048|gb|EGF75553.1| oxaloacetate decarboxylase, alpha subunit [Propionibacterium acnes
           HL099PA1]
 gi|332676405|gb|AEE73221.1| methylmalonyl-CoA carboxyltransferase 5S subunit [Propionibacterium
           acnes 266]
          Length = 497

 Score = 35.4 bits (80), Expect = 3.4,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 37/106 (34%), Gaps = 15/106 (14%)

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S L  LL   +  G++          +    K  ++ MDV    DA      LEH     
Sbjct: 78  SRLQMLLRGQNLLGYRHYNDEVV---DKFVEKSAENGMDVFRVFDALNDPRNLEH----- 129

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
                   +AA+++  K         + P    +   +QAD  +D+
Sbjct: 130 -------AMAAVKKTGKHAQGTICYTTSPIHTPESFVKQADRLIDM 168


>gi|50843454|ref|YP_056681.1| oxaloacetate decarboxylase [Propionibacterium acnes KPA171202]
 gi|50841056|gb|AAT83723.1| methylmalonyl-CoA carboxyltransferase [Propionibacterium acnes
           KPA171202]
 gi|315107798|gb|EFT79774.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL030PA1]
          Length = 497

 Score = 35.4 bits (80), Expect = 3.4,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 37/106 (34%), Gaps = 15/106 (14%)

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S L  LL   +  G++          +    K  ++ MDV    DA      LEH     
Sbjct: 78  SRLQMLLRGQNLLGYRHYNDEVV---DKFVEKSAENGMDVFRVFDALNDPRNLEH----- 129

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
                   +AA+++  K         + P    +   +QAD  +D+
Sbjct: 130 -------AMAAVKKTGKHAQGTICYTTSPIHTPESFVKQADRLIDM 168


>gi|188495607|ref|ZP_03002877.1| ATP-dependent helicase HrpA [Escherichia coli 53638]
 gi|188490806|gb|EDU65909.1| ATP-dependent helicase HrpA [Escherichia coli 53638]
          Length = 1300

 Score = 35.4 bits (80), Expect = 3.4,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 41/120 (34%), Gaps = 4/120 (3%)

Query: 22  KALGFDIDYRKLLKAFRSRAIV-IRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAK 80
           ++L  D     L +    R  + I     T       + F+    +         +V  +
Sbjct: 202 RSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYR 261

Query: 81  VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVT 140
              E  ++  R ++++  D   AVD   Q    + L+  SG+        AL +   + T
Sbjct: 262 PIVEEADDTERDQLQAIFD---AVDELSQESHGDILIFMSGEREIRDTADALNKLNLRHT 318


>gi|307138062|ref|ZP_07497418.1| ATP-dependent RNA helicase HrpA [Escherichia coli H736]
 gi|331641987|ref|ZP_08343122.1| ATP-dependent helicase HrpA [Escherichia coli H736]
 gi|331038785|gb|EGI11005.1| ATP-dependent helicase HrpA [Escherichia coli H736]
          Length = 1300

 Score = 35.4 bits (80), Expect = 3.5,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 41/120 (34%), Gaps = 4/120 (3%)

Query: 22  KALGFDIDYRKLLKAFRSRAIV-IRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAK 80
           ++L  D     L +    R  + I     T       + F+    +         +V  +
Sbjct: 202 RSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYR 261

Query: 81  VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVT 140
              E  ++  R ++++  D   AVD   Q    + L+  SG+        AL +   + T
Sbjct: 262 PIVEEADDTERDQLQAIFD---AVDELSQESHGDILIFMSGEREIRDTADALNKLNLRHT 318


>gi|299769897|ref|YP_003731923.1| 2,4-dienoyl-CoA reductase [NADPH](2,4-dienoyl coenzymeA reductase)
           [Acinetobacter sp. DR1]
 gi|298699985|gb|ADI90550.1| 2,4-dienoyl-CoA reductase [NADPH](2,4-dienoyl coenzymeA reductase)
           [Acinetobacter sp. DR1]
          Length = 674

 Score = 35.4 bits (80), Expect = 3.5,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 26/59 (44%)

Query: 101 ELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQ 159
            + +D       ++H+VI +G   FT +   L+ + K V ++        + + +  RQ
Sbjct: 608 HITIDGQPSVLEVDHVVICAGQESFTAMYDQLKTEGKNVHLIGGAKEAGELDAKRAIRQ 666


>gi|145698255|ref|NP_415931.4| predicted ATP-dependent helicase [Escherichia coli str. K-12
           substr. MG1655]
 gi|170081089|ref|YP_001730409.1| ATP-dependent helicase [Escherichia coli str. K-12 substr. DH10B]
 gi|238900641|ref|YP_002926437.1| ATP-dependent helicase [Escherichia coli BW2952]
 gi|256022910|ref|ZP_05436775.1| ATP-dependent RNA helicase HrpA [Escherichia sp. 4_1_40B]
 gi|300950296|ref|ZP_07164231.1| ATP-dependent helicase HrpA [Escherichia coli MS 116-1]
 gi|300954073|ref|ZP_07166551.1| ATP-dependent helicase HrpA [Escherichia coli MS 175-1]
 gi|301017667|ref|ZP_07182340.1| ATP-dependent helicase HrpA [Escherichia coli MS 196-1]
 gi|301647118|ref|ZP_07246940.1| ATP-dependent helicase HrpA [Escherichia coli MS 146-1]
 gi|13638202|sp|P43329|HRPA_ECOLI RecName: Full=ATP-dependent RNA helicase hrpA
 gi|145693127|gb|AAC74495.2| predicted ATP-dependent helicase [Escherichia coli str. K-12
           substr. MG1655]
 gi|169888924|gb|ACB02631.1| ATP-dependent helicase [Escherichia coli str. K-12 substr. DH10B]
 gi|238860044|gb|ACR62042.1| ATP-dependent helicase [Escherichia coli BW2952]
 gi|260449458|gb|ACX39880.1| ATP-dependent helicase HrpA [Escherichia coli DH1]
 gi|299882705|gb|EFI90916.1| ATP-dependent helicase HrpA [Escherichia coli MS 196-1]
 gi|300318932|gb|EFJ68716.1| ATP-dependent helicase HrpA [Escherichia coli MS 175-1]
 gi|300450354|gb|EFK13974.1| ATP-dependent helicase HrpA [Escherichia coli MS 116-1]
 gi|301074707|gb|EFK89513.1| ATP-dependent helicase HrpA [Escherichia coli MS 146-1]
 gi|315136053|dbj|BAJ43212.1| ATP-dependent RNA helicase HrpA [Escherichia coli DH1]
 gi|323942174|gb|EGB38347.1| ATP-dependent helicase HrpA [Escherichia coli E482]
          Length = 1300

 Score = 35.4 bits (80), Expect = 3.5,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 41/120 (34%), Gaps = 4/120 (3%)

Query: 22  KALGFDIDYRKLLKAFRSRAIV-IRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAK 80
           ++L  D     L +    R  + I     T       + F+    +         +V  +
Sbjct: 202 RSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYR 261

Query: 81  VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVT 140
              E  ++  R ++++  D   AVD   Q    + L+  SG+        AL +   + T
Sbjct: 262 PIVEEADDTERDQLQAIFD---AVDELSQESHGDILIFMSGEREIRDTADALNKLNLRHT 318


>gi|157160891|ref|YP_001458209.1| ATP-dependent RNA helicase HrpA [Escherichia coli HS]
 gi|157066571|gb|ABV05826.1| ATP-dependent helicase HrpA [Escherichia coli HS]
          Length = 1300

 Score = 35.4 bits (80), Expect = 3.5,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 41/120 (34%), Gaps = 4/120 (3%)

Query: 22  KALGFDIDYRKLLKAFRSRAIV-IRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAK 80
           ++L  D     L +    R  + I     T       + F+    +         +V  +
Sbjct: 202 RSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYR 261

Query: 81  VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVT 140
              E  ++  R ++++  D   AVD   Q    + L+  SG+        AL +   + T
Sbjct: 262 PIVEEADDTERDQLQAIFD---AVDELSQESHGDILIFMSGEREIRDTADALNKLNLRHT 318


>gi|291545849|emb|CBL18957.1| Protein of unknown function DUF88 [Ruminococcus sp. SR1/5]
          Length = 78

 Score = 35.4 bits (80), Expect = 3.6,   Method: Composition-based stats.
 Identities = 12/92 (13%), Positives = 25/92 (27%), Gaps = 18/92 (19%)

Query: 2  FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
           D   +IA+ ID  N+  S K +   +D         +  I      Y          + 
Sbjct: 1  MDNELRIAILIDADNV--SDKYIKIIVD------EVANIGIATYKRIYGDWTSARLSSWK 52

Query: 62 PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKR 93
                        +      ++++   G+  
Sbjct: 53 K----------VLLEDSIIPIQQYSYTTGKTP 74


>gi|312971579|ref|ZP_07785754.1| ATP-dependent helicase HrpA [Escherichia coli 1827-70]
 gi|310336176|gb|EFQ01376.1| ATP-dependent helicase HrpA [Escherichia coli 1827-70]
          Length = 1281

 Score = 35.4 bits (80), Expect = 3.6,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 41/120 (34%), Gaps = 4/120 (3%)

Query: 22  KALGFDIDYRKLLKAFRSRAIV-IRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAK 80
           ++L  D     L +    R  + I     T       + F+    +         +V  +
Sbjct: 183 RSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYR 242

Query: 81  VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVT 140
              E  ++  R ++++  D   AVD   Q    + L+  SG+        AL +   + T
Sbjct: 243 PIVEEADDTERDQLQAIFD---AVDELSQESHGDILIFMSGEREIRDTADALNKLNLRHT 299


>gi|89108258|ref|AP_002038.1| ATP-dependent helicase [Escherichia coli str. K-12 substr. W3110]
 gi|1742304|dbj|BAA15029.1| ATP-dependent helicase [Escherichia coli str. K12 substr. W3110]
          Length = 1281

 Score = 35.4 bits (80), Expect = 3.6,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 41/120 (34%), Gaps = 4/120 (3%)

Query: 22  KALGFDIDYRKLLKAFRSRAIV-IRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAK 80
           ++L  D     L +    R  + I     T       + F+    +         +V  +
Sbjct: 183 RSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVRYR 242

Query: 81  VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVT 140
              E  ++  R ++++  D   AVD   Q    + L+  SG+        AL +   + T
Sbjct: 243 PIVEEADDTERDQLQAIFD---AVDELSQESHGDILIFMSGEREIRDTADALNKLNLRHT 299


>gi|117921344|ref|YP_870536.1| inorganic polyphosphate/ATP-NAD kinase [Shewanella sp. ANA-3]
 gi|189037393|sp|A0KZB1|PPNK_SHESA RecName: Full=Probable inorganic polyphosphate/ATP-NAD kinase;
           Short=Poly(P)/ATP NAD kinase
 gi|117613676|gb|ABK49130.1| ATP-NAD/AcoX kinase [Shewanella sp. ANA-3]
          Length = 309

 Score = 35.4 bits (80), Expect = 3.7,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 15/41 (36%)

Query: 102 LAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIV 142
           +AVD  E     +  ++  GDG        L R    V  V
Sbjct: 69  IAVDLLEIGARCDLAIVVGGDGNMLGAARVLARFDVGVIGV 109


>gi|312143592|ref|YP_003995038.1| RNA modification enzyme, MiaB family [Halanaerobium sp.
           'sapolanicus']
 gi|311904243|gb|ADQ14684.1| RNA modification enzyme, MiaB family [Halanaerobium sp.
           'sapolanicus']
          Length = 442

 Score = 35.4 bits (80), Expect = 3.9,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 55/168 (32%), Gaps = 14/168 (8%)

Query: 14  GANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQ-FSPLHPLLDWLHY 72
           G N+ +    L  +ID+  LL+       + R  + T+   D  ++    +  L     +
Sbjct: 203 GQNVNSYGNDLAEEIDFPLLLEELNKVDSLARIRFMTSHPRDFSEKLLLAIKNLEKVAKH 262

Query: 73  NGFQVVAKVAKEFTENCGRKRVKSSMDV--ELAVDAFEQSEGLEHLVIFSG--DGCFTTL 128
               + +   K   E       +  +D   E+     E +   + +V F G  D  F   
Sbjct: 263 IHLPIQSGSNKILKEMNRGYSREYYIDTVKEIQNKMPEAAISTDFIVGFPGESDEDFEQT 322

Query: 129 VAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNEIARD 176
           +  ++   +     + + S  S      R           +  E+ ++
Sbjct: 323 LKLVKEL-RFDMAYTFIYSPRSGTPAAKRE--------DQIAEEVKKE 361


>gi|328947706|ref|YP_004365043.1| glycoside hydrolase family 3 domain protein [Treponema
           succinifaciens DSM 2489]
 gi|328448030|gb|AEB13746.1| glycoside hydrolase family 3 domain protein [Treponema
           succinifaciens DSM 2489]
          Length = 561

 Score = 35.0 bits (79), Expect = 4.1,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 24/64 (37%)

Query: 85  FTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVST 144
           F  +   K   S+ D   A      ++  + ++I   D     +   L+   K+V I+S 
Sbjct: 454 FHFSYELKNDNSNFDNWNAASLVSVADSYDTIIICVYDKHTANIAKRLRYMDKRVVILSI 513

Query: 145 VLSD 148
           +   
Sbjct: 514 MSPV 517


>gi|322795286|gb|EFZ18091.1| hypothetical protein SINV_04947 [Solenopsis invicta]
          Length = 393

 Score = 35.0 bits (79), Expect = 4.1,   Method: Composition-based stats.
 Identities = 18/134 (13%), Positives = 43/134 (32%), Gaps = 9/134 (6%)

Query: 11  FIDG----ANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           FID      N            +Y KL +  + +  +I     T       +     + +
Sbjct: 96  FIDTGQRPQNFIRDVGLADRFEEYPKLRELIKLKDDLI---AETATPPMYLKTDLLSYNM 152

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVK-SSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
            +        ++    +E+   CG   V+  + D  + +D  E +     + ++ G    
Sbjct: 153 KELNCKFDVILIEPPLEEYQRTCGATNVQLWNWDQIMELDIGEVAANRSFVFLWCGSSDG 212

Query: 126 TTLVAA-LQRKVKK 138
             +    L++   +
Sbjct: 213 LDMGRFCLRKWGFR 226


>gi|325122448|gb|ADY81971.1| 2,4-dienoyl-CoA reductase [Acinetobacter calcoaceticus PHEA-2]
          Length = 690

 Score = 35.0 bits (79), Expect = 4.2,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 35/91 (38%), Gaps = 4/91 (4%)

Query: 69  WLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTL 128
           W+H  G  +  +  K F      K     +   + +D       ++H+VI +G   FT +
Sbjct: 596 WIHRTG--LKNRQVKMFAGVQYDKVDDQGL--HITIDGKPSVLEVDHVVICAGQESFTAM 651

Query: 129 VAALQRKVKKVTIVSTVLSDPSMASDQLRRQ 159
              L+   K V ++        + + +  RQ
Sbjct: 652 YDQLKTDGKNVHLIGGAKEAGELDAKRAIRQ 682


>gi|117928955|ref|YP_873506.1| hypothetical protein Acel_1748 [Acidothermus cellulolyticus 11B]
 gi|117649418|gb|ABK53520.1| hypothetical protein Acel_1748 [Acidothermus cellulolyticus 11B]
          Length = 284

 Score = 35.0 bits (79), Expect = 4.2,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 61/191 (31%), Gaps = 35/191 (18%)

Query: 11  FIDGANL-----YASSKALGF---DIDYRKLLKAFRSR------AIVIRAYYYTTVVGDP 56
            +DG  L     + ++   G     +DY  LL A   R        +    ++       
Sbjct: 2   LVDGGYLLGECAWRAAGRYGRSAIRVDYDMLLTAIADRVESFGAGELATVVWFDAAP--- 58

Query: 57  EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAV--DAFEQSEG-- 112
                P   L       G ++            GR   +    VELA+  +    S    
Sbjct: 59  --DAKPTPELERIAALEGVELRL----------GRLAGRRRRGVELAIYREMLALSRNPE 106

Query: 113 LEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY--LK 170
           ++ +V+ +G+      +  +++  K++ +              +R  AD  + L +  L 
Sbjct: 107 IDTIVLVAGNAELAIPIGDVRQLGKRIIVAQPGWDSDDEDVAAVRDAADETVVLPWPLLA 166

Query: 171 NEIARDPDEDK 181
           + I     E +
Sbjct: 167 DAIELPAAELR 177


>gi|288939863|ref|YP_003442103.1| hypothetical protein Alvin_0101 [Allochromatium vinosum DSM 180]
 gi|288895235|gb|ADC61071.1| hypothetical protein Alvin_0101 [Allochromatium vinosum DSM 180]
          Length = 330

 Score = 35.0 bits (79), Expect = 4.5,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 51/154 (33%), Gaps = 19/154 (12%)

Query: 2   FDPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
             P   +AL+IDG N   +            LL + R    +  +     V+   +   +
Sbjct: 67  LQPPRSVALYIDGDNQSPAIAH--------DLLASVRHDWGLEVSRV---VLAGNDHGHT 115

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDV--ELAVDAFEQSEGLEHLVIF 119
               L    +    +      +       RK   + + V  EL  +  +  +G + +V+ 
Sbjct: 116 VPRWLTALANEAVHEDRILALRV-----QRKPEAADLAVILELGANMEQHRQGPDLVVVV 170

Query: 120 SGDGCFTTLVAALQRKVKKVTI-VSTVLSDPSMA 152
           S D        A++ +  +V +  +   +  +  
Sbjct: 171 SRDEWLIGAAEAVRARGCRVWVAYAENEAVAAHT 204


>gi|314979678|gb|EFT23772.1| pyruvate carboxylase subunit B [Propionibacterium acnes HL072PA2]
          Length = 497

 Score = 35.0 bits (79), Expect = 4.6,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 37/106 (34%), Gaps = 15/106 (14%)

Query: 61  SPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFS 120
           S L  LL   +  G++          +    K  ++ MDV    DA      LEH     
Sbjct: 78  SRLQMLLRGQNLRGYRHYNDEVV---DKFVEKSAENGMDVFRVFDALNDPRNLEH----- 129

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDL 166
                   +AA+++  K         + P    +   +QAD  +D+
Sbjct: 130 -------AMAAVKKTGKHAQGTICYTTSPIHTPESFVKQADRLIDM 168


>gi|307215508|gb|EFN90160.1| Methyltransferase-like protein KIAA1627-like protein [Harpegnathos
           saltator]
          Length = 902

 Score = 35.0 bits (79), Expect = 4.6,   Method: Composition-based stats.
 Identities = 19/134 (14%), Positives = 43/134 (32%), Gaps = 9/134 (6%)

Query: 11  FIDG----ANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPL 66
           FID      N            +Y KL +  + +  +I     T       +     + L
Sbjct: 605 FIDTGQRPQNFIRDVGLADRFEEYPKLRELIKLKDDLI---AETATPPMYLKTDLLSYNL 661

Query: 67  LDWLHYNGFQVVAKVAKEFTENCGRKRVK-SSMDVELAVDAFEQSEGLEHLVIFSGDGCF 125
            +        ++    +E+   CG   V+  + D  + +D  E +     + ++ G    
Sbjct: 662 KELNCKFDVILIEPPLEEYQRTCGATNVQLWNWDQIMELDIGEVAANRSFVFLWCGSSDG 721

Query: 126 TTLVAA-LQRKVKK 138
             +    L++   +
Sbjct: 722 LDMGRFCLRKWGFR 735


>gi|255537065|ref|XP_002509599.1| nucleic acid binding protein, putative [Ricinus communis]
 gi|223549498|gb|EEF50986.1| nucleic acid binding protein, putative [Ricinus communis]
          Length = 294

 Score = 34.6 bits (78), Expect = 5.5,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 32/84 (38%), Gaps = 11/84 (13%)

Query: 97  SMDVEL---AVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMAS 153
           + DV L    VD  +     E LV+ S D  F  ++   + +  K  +V  +        
Sbjct: 138 AADVALREHIVDMMD-KRRAECLVLVSDDSDFVGVLKEAKLRCVKTVVVGDINDG----- 191

Query: 154 DQLRRQAD-YFMDLAYLKNEIARD 176
             L+R AD  F     L  +  ++
Sbjct: 192 -ALKRVADAEFSWQEILMGKAKKE 214


>gi|311279712|ref|YP_003941943.1| ATP-dependent helicase HrpA [Enterobacter cloacae SCF1]
 gi|308748907|gb|ADO48659.1| ATP-dependent helicase HrpA [Enterobacter cloacae SCF1]
          Length = 1300

 Score = 34.6 bits (78), Expect = 5.6,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 41/120 (34%), Gaps = 4/120 (3%)

Query: 22  KALGFDIDYRKLLKAFRSRAIV-IRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAK 80
           ++L  D     L +    R  + I     T       + F+    +         +V  +
Sbjct: 202 RSLNIDFLLGYLKELLPRRPDLKIIITSATIDPQRFSRHFNNAPVIEVSGRTYPVEVRYR 261

Query: 81  VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVT 140
              E  ++  R ++++  D   AVD        + L+  SG+        AL ++  + T
Sbjct: 262 PIVEDADDTERDQLQAIFD---AVDELNHEGPGDILIFMSGEREIRDTADALNKRDMRHT 318


>gi|56696704|ref|YP_167065.1| isochorismatase family protein [Ruegeria pomeroyi DSS-3]
 gi|56678441|gb|AAV95107.1| isochorismatase family protein [Ruegeria pomeroyi DSS-3]
          Length = 213

 Score = 34.6 bits (78), Expect = 5.7,   Method: Composition-based stats.
 Identities = 25/171 (14%), Positives = 52/171 (30%), Gaps = 27/171 (15%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
           P +   LFID  N   S+   G + D     +            +Y   +         +
Sbjct: 11  PAQSALLFIDVQNF--SAHRKGAEFDGLDPAEFDAKYG------WYFDQLDSRVIP--NM 60

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTEN----------CGRKRVKSSMDVELAVDAFEQSEGL 113
             +       G +V+    +  T +           G    K S D    +D  + +   
Sbjct: 61  QAVQAACRAAGVEVMYTTIESLTLDGRDRSLDYKITGFNVPKGSWD-GKVID--QIAPEG 117

Query: 114 EHLVIFSGDGCF---TTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQAD 161
           + +V+  G       T +   L+    +  ++S +++        +R   D
Sbjct: 118 DEIVLPKGSSSVFVSTHIDYVLRNLGVRQLVISGLIT-DQCVESAIRDACD 167


>gi|145631705|ref|ZP_01787467.1| hypothetical protein CGSHi22421_00912 [Haemophilus influenzae
           R3021]
 gi|144982648|gb|EDJ90190.1| hypothetical protein CGSHi22421_00912 [Haemophilus influenzae
           R3021]
          Length = 106

 Score = 34.6 bits (78), Expect = 5.7,   Method: Composition-based stats.
 Identities = 5/40 (12%), Positives = 15/40 (37%)

Query: 102 LAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTI 141
           + +      + ++ +V+ +GD  F       + K     +
Sbjct: 1   MDITILSYEKLVDVIVLIAGDSDFVPAAKQARIKGVDFIL 40


>gi|268608404|ref|ZP_06142131.1| hexosyltransferase [Ruminococcus flavefaciens FD-1]
          Length = 389

 Score = 34.6 bits (78), Expect = 5.8,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 55/173 (31%), Gaps = 20/173 (11%)

Query: 5   REKIALFIDGANLYASSKALGFDIDYRKLL-KAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
            ++IAL     N     +  G    Y +L+ +    +  V             +  ++  
Sbjct: 1   MKRIALV----NQRYGMEVNGGSEYYTRLIAERLAEKYQVDVITTKALDYTTWDNHYTAD 56

Query: 64  HPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDG 123
              ++ +H   F V    AK+F E  G+      +D E            E +      G
Sbjct: 57  EEDINGVHVLRFNVDKPRAKDFNEFNGKYLTSGKLDTE-----------TEKIWFEKQ-G 104

Query: 124 CFTT-LVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADY--FMDLAYLKNEI 173
            +    +  ++    K  +   V     +  + L   AD   F+  A+ +  I
Sbjct: 105 PYCPDAIRYIRENHDKYDVFIFVTYLYYLTVNGLPEAADKAVFIPTAHEEPFI 157


>gi|210611270|ref|ZP_03288825.1| hypothetical protein CLONEX_01015 [Clostridium nexile DSM 1787]
 gi|210152034|gb|EEA83041.1| hypothetical protein CLONEX_01015 [Clostridium nexile DSM 1787]
          Length = 490

 Score = 34.6 bits (78), Expect = 6.0,   Method: Composition-based stats.
 Identities = 24/168 (14%), Positives = 53/168 (31%), Gaps = 24/168 (14%)

Query: 3   DPREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSP 62
           +  EK+ + +D  N            D  KL    R+          + ++ D     S 
Sbjct: 267 ESSEKVVIVVDCEN-----------SDPYKLCATLRNLDRQYTKKISSIILFDDVHAASA 315

Query: 63  LHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDA--FEQSEGLEHLVIFS 120
              L  +       ++ +  K+          KS +DV L            ++  ++ S
Sbjct: 316 WRILESFTAIPVEHMMIERVKQ---------NKSLVDVMLISRTCQEHYKNNVDSFILVS 366

Query: 121 GDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAY 168
            D  +  L+++LQ    +  ++    S      + L     ++  +  
Sbjct: 367 SDSDYWGLISSLQDA--RFLVMIERESCGPDLKNALSDAGIFYCYIDD 412


>gi|229825138|ref|ZP_04451207.1| hypothetical protein GCWU000182_00489 [Abiotrophia defectiva ATCC
           49176]
 gi|229790510|gb|EEP26624.1| hypothetical protein GCWU000182_00489 [Abiotrophia defectiva ATCC
           49176]
          Length = 301

 Score = 34.6 bits (78), Expect = 6.1,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 49/139 (35%), Gaps = 15/139 (10%)

Query: 33  LLKAFRSRAIVIRAYY--YTTVVGDPEQQFSPLHPLLDWLHYNG--FQVVAKVAKEFTEN 88
           L+   +++  V+      Y + V +       +  L+ +L   G   +   K   E  + 
Sbjct: 140 LMTDLKNKGSVLYLDMEPYNSRVVNGYGNPKGMSELIYYLKQGGEKLKWKFKTLIEKEDV 199

Query: 89  CGRK---------RVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKV 139
            GR             +  DV+  +D  ++    + ++I  G    T     L +  K +
Sbjct: 200 SGRILPVSCPLDLSELTGEDVKELLDIVQRLNEYDFILINLGL--LTPATFELMKAGKHI 257

Query: 140 TIVSTVLSDPSMASDQLRR 158
            IV T  +    +++ L  
Sbjct: 258 EIVVTRKNGDRESAENLIN 276


>gi|109896470|ref|YP_659725.1| HAD family hydrolase [Pseudoalteromonas atlantica T6c]
 gi|109698751|gb|ABG38671.1| HAD-superfamily hydrolase, subfamily IA, variant 3
           [Pseudoalteromonas atlantica T6c]
          Length = 227

 Score = 34.6 bits (78), Expect = 6.1,   Method: Composition-based stats.
 Identities = 13/95 (13%), Positives = 31/95 (32%), Gaps = 3/95 (3%)

Query: 49  YTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFE 108
           +       E        +       G + +    ++         +    D +L +D  +
Sbjct: 24  HYDSHFWLEHLPKKYAGIKGISEEQGKEYMMAEYRQVFGTIDWYCLDYWAD-KLQLDIMQ 82

Query: 109 QSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS 143
               +EH  + S       L+ AL+   ++V +V+
Sbjct: 83  AKREVEH--LISMRDDTIPLLDALRESGREVILVT 115


>gi|298528011|ref|ZP_07015415.1| conserved hypothetical protein [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298511663|gb|EFI35565.1| conserved hypothetical protein [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 212

 Score = 34.6 bits (78), Expect = 6.2,   Method: Composition-based stats.
 Identities = 10/67 (14%), Positives = 29/67 (43%), Gaps = 7/67 (10%)

Query: 100 VELAVDAFEQSEGL--EHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLR 157
           V++A+D    +     +  V+ +        +  ++++  ++ +     +  +  S +L 
Sbjct: 142 VKMALDMTTLAARKAGDMFVLITDRSDLVPAMEMVRQEGVQICL----DNMHAPVSSELS 197

Query: 158 RQADYFM 164
            QAD F+
Sbjct: 198 EQAD-FI 203


>gi|91793924|ref|YP_563575.1| NAD(+) kinase [Shewanella denitrificans OS217]
 gi|123356621|sp|Q12L24|PPNK_SHEDO RecName: Full=Probable inorganic polyphosphate/ATP-NAD kinase;
           Short=Poly(P)/ATP NAD kinase
 gi|91715926|gb|ABE55852.1| NAD(+) kinase [Shewanella denitrificans OS217]
          Length = 309

 Score = 34.6 bits (78), Expect = 6.2,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 15/40 (37%)

Query: 103 AVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIV 142
           AVD  E  E  +  ++  GDG        L R    V  V
Sbjct: 70  AVDLVEIGERCDLAIVVGGDGNMLGAARVLARYDVAVIGV 109


>gi|255566227|ref|XP_002524101.1| calcium-dependent protein kinase, putative [Ricinus communis]
 gi|223536669|gb|EEF38311.1| calcium-dependent protein kinase, putative [Ricinus communis]
          Length = 584

 Score = 34.6 bits (78), Expect = 6.3,   Method: Composition-based stats.
 Identities = 12/82 (14%), Positives = 32/82 (39%), Gaps = 10/82 (12%)

Query: 104 VDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVS-----TVLSDPSMASDQLRR 158
           +D+  Q+  +++       G F   +  L +  K+  + +            +  D+L++
Sbjct: 479 IDSLMQAADIDNSGTIDY-GEFIAAMLHLNKIDKEDHLFAAFSYFDKDGSGYITQDELQQ 537

Query: 159 QADYF----MDLAYLKNEIARD 176
             D F    + +  +  E+ +D
Sbjct: 538 ACDQFGLGDIHIEDIIREVDQD 559


>gi|194771122|ref|XP_001967623.1| GF19970 [Drosophila ananassae]
 gi|190614490|gb|EDV30014.1| GF19970 [Drosophila ananassae]
          Length = 121

 Score = 34.6 bits (78), Expect = 6.4,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 31/90 (34%), Gaps = 1/90 (1%)

Query: 11  FIDGANL-YASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDW 69
           FID  +L Y     LG  +D+R ++     + I+I  ++       P   +      ++ 
Sbjct: 11  FIDVGSLTYGGISGLGEKMDHRVIMAHTTVQCILIPRFWLFEAAESPGNIWQRQRFYIEC 70

Query: 70  LHYNGFQVVAKVAKEFTENCGRKRVKSSMD 99
              + F+   K  K             + D
Sbjct: 71  TREDLFKDFLKTRKWEKFRHDYIESILNAD 100


>gi|312078871|ref|XP_003141928.1| hypothetical protein LOAG_06341 [Loa loa]
 gi|307762909|gb|EFO22143.1| hypothetical protein LOAG_06341 [Loa loa]
          Length = 577

 Score = 34.6 bits (78), Expect = 6.5,   Method: Composition-based stats.
 Identities = 16/166 (9%), Positives = 40/166 (24%), Gaps = 17/166 (10%)

Query: 21  SKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAK 80
            KA   +IDY+ +   +  R                    S L       +     +   
Sbjct: 210 LKAYKTEIDYQTIRDEYMKRYS---TSLNAAEHQRLFMNKSALKNFWRVFYREIILINDC 266

Query: 81  VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVT 140
             +    N   +  +         D       ++ + + +         + +  K + V 
Sbjct: 267 PIRVRLRNPNIQIPEE------ITDDLHLLANIDKIELPTFALECRPSASNVVDKGRAVE 320

Query: 141 IVSTVLSDPSMASD--------QLRRQADYFMDLAYLKNEIARDPD 178
               V       S         +++   D  ++    + +I     
Sbjct: 321 YPGVVAVLNGSTSKKPTMSLLEEVKEDYDRLLNSEKQREDIKNADR 366


>gi|225403120|ref|ZP_03760417.1| hypothetical protein CLOSTASPAR_04448 [Clostridium asparagiforme
           DSM 15981]
 gi|225043238|gb|EEG53484.1| hypothetical protein CLOSTASPAR_04448 [Clostridium asparagiforme
           DSM 15981]
          Length = 253

 Score = 34.6 bits (78), Expect = 6.5,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 24/53 (45%), Gaps = 5/53 (9%)

Query: 77  VVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLE-----HLVIFSGDGC 124
           VVA  AK   +  G    K+   V++ +DA E +  ++      +++ S D  
Sbjct: 126 VVAIDAKRRPDGSGWNIYKNGGRVDMGIDALEWARTVDRLGAGEILLTSMDCD 178


>gi|257070264|ref|YP_003156519.1| hypothetical protein Bfae_31700 [Brachybacterium faecium DSM 4810]
 gi|256561082|gb|ACU86929.1| hypothetical protein Bfae_31700 [Brachybacterium faecium DSM 4810]
          Length = 182

 Score = 34.6 bits (78), Expect = 6.8,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 50/180 (27%), Gaps = 31/180 (17%)

Query: 10  LFIDGANLYASSK--------ALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFS 61
           L +DG N+ A+                 + KLL    +         +   V D      
Sbjct: 8   LLVDGENIDATLGVSVLGRRPHPEERPRWNKLLHHAETSWQQPVTALFFLAVEDSLPSA- 66

Query: 62  PLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSG 121
                +  L   G++ V             +     +D+ +   A         +++ S 
Sbjct: 67  ----FVQALLAMGYKAVPL-----------RGEGKIVDIAIQRTAEALQSREADVMLVSH 111

Query: 122 DGCFTTLVAALQ-RKVKKVTIVSTVLSDPSMASDQLRRQA-DYFMDLA-YLKNEIARDPD 178
           D  F   +  L     ++  I+          +  L+      F DL   +    +R P 
Sbjct: 112 DKDFVPQMEDLAGTVDRRTAIIGF----REFMAADLQEIPGIEFHDLEYDVAAFTSRLPR 167


>gi|256374792|ref|YP_003098452.1| hydrolase, TatD family [Actinosynnema mirum DSM 43827]
 gi|255919095|gb|ACU34606.1| hydrolase, TatD family [Actinosynnema mirum DSM 43827]
          Length = 256

 Score = 34.2 bits (77), Expect = 7.2,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 36/115 (31%), Gaps = 8/115 (6%)

Query: 46  AYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVD 105
           A      VG+    +   +   D      F+   ++AK   +        +  DV  A+D
Sbjct: 84  ARPRVVAVGETGLDYYWDYAPRDAQQEA-FRWHIELAKRVGKPLMIHDRDAHADVLAALD 142

Query: 106 AFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQA 160
           A E +        FSGD  F            +  ++S         S  LR  A
Sbjct: 143 A-EGAPEKVVFHCFSGDLDFARACVE------RGFVLSFAGPVTFRNSSALREAA 190


>gi|119719251|ref|YP_919746.1| bis(5'nucleosyl)-tetraphosphatase, ApaH [Thermofilum pendens Hrk 5]
 gi|119524371|gb|ABL77743.1| bis(5'nucleosyl)-tetraphosphatase, ApaH [Thermofilum pendens Hrk 5]
          Length = 281

 Score = 34.2 bits (77), Expect = 7.9,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 14/38 (36%)

Query: 135 KVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYLKNE 172
           K K+V  V     D     +  R  AD ++ L    + 
Sbjct: 44  KGKRVLFVGDTHGDVESTINAFREAADVYVFLGDYVDR 81


>gi|119503370|ref|ZP_01625454.1| Outer membrane protein [marine gamma proteobacterium HTCC2080]
 gi|119461016|gb|EAW42107.1| Outer membrane protein [marine gamma proteobacterium HTCC2080]
          Length = 758

 Score = 34.2 bits (77), Expect = 8.0,   Method: Composition-based stats.
 Identities = 18/147 (12%), Positives = 43/147 (29%), Gaps = 22/147 (14%)

Query: 4   PREKIALFIDGANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPL 63
              K+ +F+DG  +  ++ AL    D   +      +  ++        V    ++    
Sbjct: 107 NDPKVGVFVDGIYVGYNAGALSSTFDLEAVEVLRGPQGTLLGRNVTGGAVLVKSKRPGNE 166

Query: 64  HPLLDWLH---------------YNGFQVVAKVAKEFTENCGRKRVKSS--MDVELAVDA 106
                 +                  G  V  KVA    +  G     +   +D+ +  D 
Sbjct: 167 FGFNAEVSVGNYGTTEFNASVEGPLGKNVFGKVAFVKMDRDGYFEDNNGGSIDLNIYPDG 226

Query: 107 FEQSEGLEHLVIFSGDGCFTTLVAALQ 133
              ++  + + +       T +   L+
Sbjct: 227 MPDTDTGDKVGM-----DLTIVRPMLR 248


>gi|300916253|ref|ZP_07133002.1| ATP-dependent helicase HrpA [Escherichia coli MS 115-1]
 gi|300416435|gb|EFJ99745.1| ATP-dependent helicase HrpA [Escherichia coli MS 115-1]
          Length = 1300

 Score = 34.2 bits (77), Expect = 8.1,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 41/120 (34%), Gaps = 4/120 (3%)

Query: 22  KALGFDIDYRKLLKAFRSRAIV-IRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAK 80
           ++L  D     L +    R  + I     T       + ++    +         +V  +
Sbjct: 202 RSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHYNNAPIIEVSGRTYPVEVRYR 261

Query: 81  VAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHLVIFSGDGCFTTLVAALQRKVKKVT 140
              E  ++  R ++++  D   AVD   Q    + L+  SG+        AL +   + T
Sbjct: 262 PIVEEADDTERDQLQAIFD---AVDELSQESPGDILIFMSGEREIRDTADALNKLNLRHT 318


>gi|291085305|ref|ZP_06352694.2| YcjR protein [Citrobacter youngae ATCC 29220]
 gi|291071559|gb|EFE09668.1| YcjR protein [Citrobacter youngae ATCC 29220]
          Length = 265

 Score = 34.2 bits (77), Expect = 8.1,   Method: Composition-based stats.
 Identities = 14/135 (10%), Positives = 32/135 (23%), Gaps = 4/135 (2%)

Query: 29  DYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHYNGFQVVAKVAKEFTEN 88
           D + +  +      V         +    +    +   L        +   K  +   + 
Sbjct: 124 DRKAVSDSLIYLDKVAERTGTVVYLEPLNRYQDHMINTLADARRYIVENNLKHVQIIGDF 183

Query: 89  CGRKRVKSSMDVELA--VDAFEQSEGLEHLVI--FSGDGCFTTLVAALQRKVKKVTIVST 144
                 +  M   L    D        ++      SG   F+ L   L+    +  +V  
Sbjct: 184 YHMNIEEDDMAQALHDNRDLLGHVHIADNHRYQPGSGTLDFSALFDQLREDNYQGYVVYE 243

Query: 145 VLSDPSMASDQLRRQ 159
                    +  R+ 
Sbjct: 244 GRVRAENLPEAYRQS 258


>gi|167756068|ref|ZP_02428195.1| hypothetical protein CLORAM_01588 [Clostridium ramosum DSM 1402]
 gi|237734054|ref|ZP_04564535.1| carbamoyl-phosphate synthase large subunit [Mollicutes bacterium
           D7]
 gi|167704060|gb|EDS18639.1| hypothetical protein CLORAM_01588 [Clostridium ramosum DSM 1402]
 gi|229382880|gb|EEO32971.1| carbamoyl-phosphate synthase large subunit [Coprobacillus sp. D7]
          Length = 1065

 Score = 34.2 bits (77), Expect = 8.3,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 23/72 (31%), Gaps = 2/72 (2%)

Query: 110 SEGLEHLVIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRRQADYFMDLAYL 169
            E +E   + SGD         +++ +K   +  T     ++    L      F+     
Sbjct: 771 MEHVERAGVHSGDSISVYPTQKIKQHIKDTIVEYTGRLAKALNVIGLINI--QFIVYEDQ 828

Query: 170 KNEIARDPDEDK 181
              I  +P   +
Sbjct: 829 VYVIEVNPRSSR 840


>gi|158424514|ref|YP_001525806.1| serine/threonine protein kinase [Azorhizobium caulinodans ORS 571]
 gi|158331403|dbj|BAF88888.1| putative serine/threonine protein kinase [Azorhizobium caulinodans
           ORS 571]
          Length = 367

 Score = 34.2 bits (77), Expect = 8.4,   Method: Composition-based stats.
 Identities = 22/162 (13%), Positives = 50/162 (30%), Gaps = 31/162 (19%)

Query: 15  ANLYASSKALGFDIDYRKLLKAFRSRAIVIRAYYYTTVVGDPEQQFSPLHPLLDWLHY-- 72
            N    +    + +D+ +L   F  R+ + R   Y  +    + + +     L       
Sbjct: 142 QNWLRGADGEAWLMDF-QLAMPFSRRSKIGRVLAYEDLRHLLKHKRTYCPEALTARERTM 200

Query: 73  ----------------NGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHL 116
                             ++ V +    +++  GR    + +   +A DA +    +  +
Sbjct: 201 LATKSLPTRIWMATGKRVYRFVTRNLMSYSDTEGRGPRVTQVAPRIA-DALKAHPAVADV 259

Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIVSTVLSDPSMASDQLRR 158
            +      F       Q    KV + + V     M ++ LR 
Sbjct: 260 HM----ADF-------QTLGGKVGLYAFVEPKAPMTAEALRE 290


>gi|257052060|ref|YP_003129893.1| nicotinate phosphoribosyltransferase [Halorhabdus utahensis DSM
           12940]
 gi|256690823|gb|ACV11160.1| Quinolinate phosphoribosyl transferase [Halorhabdus utahensis DSM
           12940]
          Length = 388

 Score = 34.2 bits (77), Expect = 8.8,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 27/74 (36%), Gaps = 7/74 (9%)

Query: 97  SMDVELAVDAFEQSEGLEHLVI---FSGDGCFTTLVAALQ----RKVKKVTIVSTVLSDP 149
           S +V+ A+ A E    L+ + +    S  G F  +V  ++     +      +       
Sbjct: 215 SDEVDEAIRAVEAVPDLDSIRLDTTSSRRGDFRRIVQEVRWELDARGHDDVGIFLSGGLD 274

Query: 150 SMASDQLRRQADYF 163
                +LR  AD F
Sbjct: 275 PTTLRELRDVADGF 288


>gi|268317081|ref|YP_003290800.1| ATP-NAD/AcoX kinase [Rhodothermus marinus DSM 4252]
 gi|262334615|gb|ACY48412.1| ATP-NAD/AcoX kinase [Rhodothermus marinus DSM 4252]
          Length = 290

 Score = 33.8 bits (76), Expect = 9.7,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 32/86 (37%), Gaps = 3/86 (3%)

Query: 57  EQQFSPLHPLLDWLHYNGFQVVAKVAKEFTENCGRKRVKSSMDVELAVDAFEQSEGLEHL 116
           EQ + P+  L+ W+   G +V               R   S D   A+ A + +  ++ L
Sbjct: 12  EQLWKPVGELIRWMARQGLEVRLHPDVAR---GLVARGLLSDDEAAALTAHDLAAEVDLL 68

Query: 117 VIFSGDGCFTTLVAALQRKVKKVTIV 142
           + F GDG          R+   V  V
Sbjct: 69  LSFGGDGTLLQSAHLAGRRGTPVLGV 94


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.311    0.138    0.374 

Lambda     K      H
   0.267   0.0428    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,497,378,442
Number of Sequences: 14124377
Number of extensions: 49367560
Number of successful extensions: 206978
Number of sequences better than 10.0: 1684
Number of HSP's better than 10.0 without gapping: 1202
Number of HSP's successfully gapped in prelim test: 482
Number of HSP's that attempted gapping in prelim test: 202673
Number of HSP's gapped (non-prelim): 1750
length of query: 182
length of database: 4,842,793,630
effective HSP length: 130
effective length of query: 52
effective length of database: 3,006,624,620
effective search space: 156344480240
effective search space used: 156344480240
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.2 bits)
S2: 77 (34.2 bits)