HHsearch alignment for GI: 254780937 and conserved domain: PRK01814

>PRK01814 rpoZ DNA-directed RNA polymerase subunit omega; Validated.
Probab=99.44  E-value=4e-14  Score=99.86  Aligned_cols=59  Identities=25%  Similarity=0.350  Sum_probs=52.1

Q ss_pred             EEHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC-CCCHHHHHHHHHCCCCCHHH
Q ss_conf             008998512878999999999999998578877677446-85411567565405879999
Q gi|254780937|r    4 TTVEDCIDKVDNRFLLVLLASHRTRHLSQGAKPTVDVGK-DKNTVVALREIASGTLSPDD   62 (122)
Q Consensus         4 vTvEdcl~kv~nrf~LVllAa~RArql~~G~~~~v~~~n-dK~~ViALREIa~gki~~~~   62 (122)
T Consensus         4 PSiD~Ll~kvdSkYsLV~~AaKRAreL~~~~~~~l~~~~S~K~Vg~ALEEI~ag~lt~~p   63 (67)
T PRK01814          4 PSIDSLLTKIDSKYTLVTVAAKRAREMQLANNCVVEKPVSHKCVGKALEEIDAEALSYVP   63 (67)
T ss_pred             CCHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECC
T ss_conf             779999986278413313777788997618854233576667099999999849536257