HHsearch alignment for GI: 254780937 and conserved domain: PRK02128

>PRK02128 DNA-directed RNA polymerase subunit omega; Provisional.
Probab=99.97  E-value=2.8e-31  Score=196.49  Aligned_cols=65  Identities=51%  Similarity=0.793  Sum_probs=62.6

Q ss_pred             CCEEEHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHH
Q ss_conf             960008998512878999999999999998578877677446854115675654058799999999
Q gi|254780937|r    1 MARTTVEDCIDKVDNRFLLVLLASHRTRHLSQGAKPTVDVGKDKNTVVALREIASGTLSPDDLEED   66 (122)
Q Consensus         1 MARvTvEdcl~kv~nrf~LVllAa~RArql~~G~~~~v~~~ndK~~ViALREIa~gki~~~~l~e~   66 (122)
T Consensus         1 MARvTVEDCl~~i~NRF~Lvl~A~~Rarql~~G~~~~ve-~~dK~tViALREIa~g~v~~e~L~e~   65 (67)
T PRK02128          1 MARITVEDCLKQIPNRFELALAATYRARQLAQGHTPKIE-SRDKPTVVALREIAAGQVGLEMLKKV   65 (67)
T ss_pred             CCEEEHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCC-CCCCCCCHHHHHHHHCCCCHHHHHHC
T ss_conf             982539998872798999999999999999669988656-68986221158878179799998417