HHsearch results for GI: 254780937 and protein with PDBid: 2waq_K

>2waq_K DNA-directed RNA polymerase RPO6 subunit; multi-subunit, transcription; 3.35A {Sulfolobus shibatae} PDB: 2wb1_I 2pmz_K 3hkz_K
Probab=97.14  E-value=0.00058  Score=41.43  Aligned_cols=47  Identities=23%  Similarity=0.335  Sum_probs=39.2

Q ss_pred             CCHHHHHHHHHHHHHHHHCCCCCCCCCCCC--CCH-HHHHHHHHCCCCCH
Q ss_conf             789999999999999985788776774468--541-15675654058799
Q gi|254780937|r   14 DNRFLLVLLASHRTRHLSQGAKPTVDVGKD--KNT-VVALREIASGTLSP   60 (122)
Q Consensus        14 ~nrf~LVllAa~RArql~~G~~~~v~~~nd--K~~-ViALREIa~gki~~   60 (122)
                      =++|+..-+-+-||.||+.|++|+|+..+.  -++ .||.+|.-.|++-+
T Consensus        27 LTKYE~aRIIG~Ra~QLs~GA~p~I~~~~~~~~d~~~IA~~EL~~~kiPf   76 (95)
T 2waq_K           27 LTRYEIARVISARALQLAMGAPALIDINNLSSTDVISIAEEEFRRGVLPI   76 (95)
T ss_dssp             CCHHHHHHHHHHHHHHHTTTCCCTTCCCSSSCCSSSHHHHHHHHTTCSCE
T ss_pred             CCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCE
T ss_conf             06989999998999999779985786788788799999999998399887