HHsearch results for GI: 254780937 and protein with PDBid: 3lu0_E
>3lu0_E DNA-directed RNA polymerase subunit omega; E. coli RNA polymerase, nucleotidyltransferase, transcription, transferase; 11.20A {Escherichia coli} PDB: 3iyd_E*
Probab=99.96 E-value=1.4e-30 Score=191.28 Aligned_cols=64 Identities=47% Similarity=0.733 Sum_probs=60.8
Q ss_pred CCEEEHHHHHCCCCCHHHHHHHHHHHHHHHHCCC-CCCCCCCCCCCHHHHHHHHHCCCCCHHHHH
Q ss_conf 9600089985128789999999999999985788-776774468541156756540587999999
Q gi|254780937|r 1 MARTTVEDCIDKVDNRFLLVLLASHRTRHLSQGA-KPTVDVGKDKNTVVALREIASGTLSPDDLE 64 (122)
Q Consensus 1 MARvTvEdcl~kv~nrf~LVllAa~RArql~~G~-~~~v~~~ndK~~ViALREIa~gki~~~~l~ 64 (122)
||||||||||+||+|||.||++||||||||+.|+ +|+++.+||||+|+||||||+|||+++.+.
T Consensus 1 MARvtVEDcl~kv~nRy~LV~lAakRARql~~g~~~~~~~~~~~K~~viALrEIa~gki~~~~l~ 65 (91)
T 3lu0_E 1 MARVTVQDAVEKIGNRFDLVLVAARRARQMQVGGKDPLVPEENDKTTVIALREIEEGLINNQILD 65 (91)
T ss_dssp -CCTTHHHHHHHSSSHHHHHHHHHHHHHHHHHTCCCSCCSSSCCCSSCCSHHHHHSSSCEEESSS
T ss_pred CCEEEHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHCC
T ss_conf 97132999988547796999999999999984898886787689607899999990897677623