Query gi|254780938|ref|YP_003065351.1| 4'-phosphopantetheinyl transferase [Candidatus Liberibacter asiaticus str. psy62] Match_columns 132 No_of_seqs 121 out of 1825 Neff 6.6 Searched_HMMs 23785 Date Tue May 31 23:46:10 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i 254780938.hhm -d /home/congqian_1/database/pdb/pdb70.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 3h88_A Holo-[acyl-carrier-prot 100.0 0 0 293.9 12.1 125 1-129 4-128 (129) 2 2bdd_A ACP-synthase; structura 100.0 1.8E-44 0 273.0 8.2 123 1-128 23-163 (182) 3 2wds_A Holo-[acyl-carrier-prot 100.0 2.7E-44 0 272.2 8.8 122 1-129 22-143 (143) 4 2qg8_A Acyl carrier protein sy 100.0 2.5E-44 0 272.3 8.3 124 1-129 4-145 (163) 5 3hyk_A Holo-[acyl-carrier-prot 100.0 6.5E-43 0 264.2 7.6 114 1-129 4-119 (122) 6 3ne9_A Phosphopantethiene prot 100.0 5E-42 0 259.1 9.7 125 1-129 6-151 (153) 7 3f09_A Holo-[acyl-carrier-prot 100.0 7.2E-42 0 258.2 7.6 113 1-129 25-140 (143) 8 1fth_A ACPS, acyl carrier prot 100.0 1.7E-41 1.4E-45 256.1 9.1 114 1-129 3-118 (122) 9 1f7l_A Holo-(acyl carrier prot 100.0 3.8E-41 1.4E-45 254.1 9.1 117 2-131 2-120 (121) 10 2was_A 3-oxoacyl-[acyl-carrier 100.0 2.1E-41 1.4E-45 255.5 5.7 119 3-129 2-121 (122) 11 3gwm_A Holo-[acyl-carrier-prot 100.0 3.1E-41 1.4E-45 254.6 6.2 120 2-129 2-128 (129) 12 2uv9_A Fatty acid synthase alp 99.6 2.2E-17 9.4E-22 118.5 0.0 119 3-129 1759-1878(1878) 13 2uv8_A Fatty acid synthase sub 99.5 3.7E-15 1.5E-19 105.9 0.0 118 4-129 1768-1886(1887) 14 1qr0_A 4'-phosphopantetheinyl 98.8 9.3E-10 3.9E-14 75.0 2.1 103 4-127 103-207 (228) 15 2c43_A Aminoadipate-semialdehy 98.7 1.3E-10 5.4E-15 79.9 -5.9 109 4-126 135-255 (323) 16 2c43_A Aminoadipate-semialdehy 98.2 4.8E-07 2E-11 59.6 2.3 84 25-125 44-130 (323) 17 1qr0_A 4'-phosphopantetheinyl 97.9 1.5E-06 6.4E-11 56.7 0.5 78 24-124 18-98 (228) No 1 >3h88_A Holo-[acyl-carrier-protein] synthase; alpha-beta structure, structural genomics of infectious diseases, cytoplasm, fatty acid biosynthesis; HET: COA; 1.85A {Vibrio cholerae} Probab=100.00 E-value=0 Score=293.92 Aligned_cols=125 Identities=40% Similarity=0.616 Sum_probs=121.1 Q ss_pred CEEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEEEECCCEEEEECCCCCCCCCCCEEEEEE Q ss_conf 96799765445899999997422768987519788999840368742001112312112346406678987431079998 Q gi|254780938|r 1 MIIGIGSDIVSIQRISRLLQSFNRKFESRCFSSLEQDVCDLSCNRVASYAKRFAAKEAFSKAIGTGISKGVSWKDIEVCH 80 (132) Q Consensus 1 MI~GIG~Div~i~Ri~~~l~~~~~~f~~ri~t~~E~~~~~~~~~~~~~lAgrfAaKEA~~KAlg~g~~~~~~~~dIeI~~ 80 (132) ||+|||||||+++||++++++++++|++|+||+.|+++|..++++.++||||||||||++||||+|++.+++|+||||++ T Consensus 4 MI~GIGiDiv~i~Ri~~~l~~~~~~f~~rift~~E~~~~~~~~~~~~~lAgRfAaKEAv~KAlg~g~~~~~~~~dIeI~~ 83 (129) T 3h88_A 4 MIVGLGTDIAEIERVEKALARSGENFARRILTDSELEQFHASKQQGRFLAKRFAAKEAASKALGTGIAQGVTFHDFTISH 83 (129) T ss_dssp CEEEEEEEEEEHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHTTSCSCTTCCGGGEEEEE T ss_pred CEEEEEEEEEEHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEE T ss_conf 68998168238799999998637889997799999999884678388999999999999998365677998660999999 Q ss_pred CCCCCEEEEECHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEEEE Q ss_conf 8888749999758999999614677712899998717976899999873 Q gi|254780938|r 81 FPGGKPYISISGRASDVLSSLVPKGYKPVVHLTISDDFPFAQAFVVIES 129 (132) Q Consensus 81 ~~~G~P~i~l~~~~~~~~~~~~~~~~~~~i~iSiSHd~~~A~A~vIlE~ 129 (132) |++|+|.+.++|.+.+.++.++.. .+|||||||++||+|+||+|+ T Consensus 84 ~~~G~P~v~l~g~~~~~~~~~~~~----~i~vSISH~~~~AiA~vile~ 128 (129) T 3h88_A 84 DKLGKPLLILSGQAAELASQLQVE----NIHLSISDERHYAMATVILER 128 (129) T ss_dssp CTTSCEEEEECHHHHHHHHHTTCC----EEEEEEEECSSEEEEEEEEEC T ss_pred CCCCCEEEEECHHHHHHHHHCCCC----EEEEEEECCCCCEEEEEEEEE T ss_conf 999990689786999999975998----399988589981999999998 No 2 >2bdd_A ACP-synthase; structural genomics, structural genomics consortium, SGC, transferase; 2.28A {Plasmodium yoelii yoelii} Probab=100.00 E-value=1.8e-44 Score=273.04 Aligned_cols=123 Identities=33% Similarity=0.462 Sum_probs=113.1 Q ss_pred CEEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC--------------CCCCCCCEEEECCCEEEEECCC Q ss_conf 96799765445899999997422768987519788999840368--------------7420011123121123464066 Q gi|254780938|r 1 MIIGIGSDIVSIQRISRLLQSFNRKFESRCFSSLEQDVCDLSCN--------------RVASYAKRFAAKEAFSKAIGTG 66 (132) Q Consensus 1 MI~GIG~Div~i~Ri~~~l~~~~~~f~~ri~t~~E~~~~~~~~~--------------~~~~lAgrfAaKEA~~KAlg~g 66 (132) ||+|||||||+++||++++++ +++|++|+||+.|+.+|..+.+ +.++||||||||||++||||+| T Consensus 23 MI~GIGiDIV~I~Ri~~ll~r-~~rFl~RIft~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~LAgRFAAKEAv~KALGtG 101 (182) T 2bdd_A 23 HIIGIGTDILCVNRIYKILEK-NINFIKKVLNPFELAEFETQKKKLNEKINKSNELKKLAIYVSKKFAAKEAILKSMGRG 101 (182) T ss_dssp EEEEEEEEEEEHHHHHHHHHH-CTTHHHHHSCHHHHHHHHTC-----------CHHHHHHHHHHHHHHHHHHHHHHTTC- T ss_pred EEEEEEEEEEEHHHHHHHHHH-CHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC T ss_conf 389995660287999999986-8348988299999999997312014444210000007899999999999999874356 Q ss_pred CCC----CCCCCEEEEEECCCCCEEEEECHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEEE Q ss_conf 789----87431079998888874999975899999961467771289999871797689999987 Q gi|254780938|r 67 ISK----GVSWKDIEVCHFPGGKPYISISGRASDVLSSLVPKGYKPVVHLTISDDFPFAQAFVVIE 128 (132) Q Consensus 67 ~~~----~~~~~dIeI~~~~~G~P~i~l~~~~~~~~~~~~~~~~~~~i~iSiSHd~~~A~A~vIlE 128 (132) ++. +++|+||||+++++|+|++.|+|.+++++.+++.. .+|||||||++||+|++++. T Consensus 102 ~~~~~~~gi~~~DIeV~~~~~GkP~l~l~g~a~~~~~~~gi~----~i~lSISHek~~a~a~~~~~ 163 (182) T 2bdd_A 102 LSSISKYGLSMNDIEIKNDKYGKPHVYLYGKAKKVAYEMGIV----KIFLSISDEKIINSQTNNIS 163 (182) T ss_dssp --------CCGGGEEEEECTTSCEEEEECHHHHHHHHHHTCC----EEEEEEEEEC---------- T ss_pred CCCCCCCCCCEEEEEEEECCCCCEEEEECHHHHHHHHHCCCC----EEEEEEECCCCCHHHCCCCC T ss_conf 555566884404899998899990899898999999986998----69998506883111105501 No 3 >2wds_A Holo-[acyl-carrier-protein] synthase; phosphopantetheine ARM, fatty acid biosynthesis, lipid synthesis, transferase, polyketides; HET: COA; 1.35A {Streptomyces coelicolor} PDB: 2wdo_A* 2jca_A 2jbz_A* 2wdy_A* Probab=100.00 E-value=2.7e-44 Score=272.16 Aligned_cols=122 Identities=34% Similarity=0.481 Sum_probs=115.2 Q ss_pred CEEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEEEECCCEEEEECCCCCCCCCCCEEEEEE Q ss_conf 96799765445899999997422768987519788999840368742001112312112346406678987431079998 Q gi|254780938|r 1 MIIGIGSDIVSIQRISRLLQSFNRKFESRCFSSLEQDVCDLSCNRVASYAKRFAAKEAFSKAIGTGISKGVSWKDIEVCH 80 (132) Q Consensus 1 MI~GIG~Div~i~Ri~~~l~~~~~~f~~ri~t~~E~~~~~~~~~~~~~lAgrfAaKEA~~KAlg~g~~~~~~~~dIeI~~ 80 (132) +|+|||||||+++||+++++++ ++|++|+||+.|+++|.+++++.++||+|||||||++||||+| .+++|+||||++ T Consensus 22 ~I~GIGiDIv~i~Ri~~~l~r~-~~f~~Rift~~E~~~~~~~~~~~~~lA~rfAaKEAv~KAlG~g--~gi~~~dIeI~~ 98 (143) T 2wds_A 22 SIIGVGIDVAEVERFGAALERT-PALAGRLFLESELLLPGGERRGVASLAARFAAKEALAKALGAP--AGLLWTDAEVWV 98 (143) T ss_dssp CEEEEEEEEEEHHHHHHHHHHC-TTHHHHHCCGGGGBCTTSSBCCHHHHHHHHHHHHHHHHHTTCC--TTCCGGGEEEEE T ss_pred EEEEEEEEEEEHHHHHHHHHHC-HHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC--CCCCCEEEEEEE T ss_conf 8889948833769999999867-5688884999999998845781889999999999999761765--688836999998 Q ss_pred CCCCCEEEEECHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEEEE Q ss_conf 8888749999758999999614677712899998717976899999873 Q gi|254780938|r 81 FPGGKPYISISGRASDVLSSLVPKGYKPVVHLTISDDFPFAQAFVVIES 129 (132) Q Consensus 81 ~~~G~P~i~l~~~~~~~~~~~~~~~~~~~i~iSiSHd~~~A~A~vIlE~ 129 (132) +++|+|++.++|.+++++++++.. .+|||||||++||+|+||+|- T Consensus 99 ~~~G~P~v~l~g~~~~~~~~~~~~----~i~vSISHd~~~AiA~VI~Eg 143 (143) T 2wds_A 99 EAGGRPRLRVTGTVAARAAELGVA----SWHVSLSADAGIASAVVIAEG 143 (143) T ss_dssp CTTSCEEEEECHHHHHHHHHHTCC----EEEEEEEEETTEEEEEEEEEC T ss_pred CCCCCCEEEECHHHHHHHHHCCCC----EEEEEEECCCCEEEEEEEEEC T ss_conf 989993589887999999986999----799989568880999999939 No 4 >2qg8_A Acyl carrier protein synthase PY06285; malaria, 3'5'ADP, SGC, structural genomics consortium, transferase; HET: A3P; 2.00A {Plasmodium yoelii yoelii} Probab=100.00 E-value=2.5e-44 Score=272.27 Aligned_cols=124 Identities=32% Similarity=0.459 Sum_probs=113.5 Q ss_pred CEEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCC--------------CCCCCCEEEECCCEEEEECCC Q ss_conf 967997654458999999974227689875197889998403687--------------420011123121123464066 Q gi|254780938|r 1 MIIGIGSDIVSIQRISRLLQSFNRKFESRCFSSLEQDVCDLSCNR--------------VASYAKRFAAKEAFSKAIGTG 66 (132) Q Consensus 1 MI~GIG~Div~i~Ri~~~l~~~~~~f~~ri~t~~E~~~~~~~~~~--------------~~~lAgrfAaKEA~~KAlg~g 66 (132) ||+|||+|||+++||+++++++ ++|++|+||+.|+++|..+.++ .+|||||||||||++|||||| T Consensus 4 mI~GIGiDIV~i~Ri~~ll~r~-~~fl~Rift~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~lAgRfAAKEAv~KAlGtg 82 (163) T 2qg8_A 4 HIIGIGTDILCVNRIYKILEKN-INFIKKVLNPFELAEFETQKKKLNEKINKSNELKKLAIYVSKKFAAKEAILKSMGRG 82 (163) T ss_dssp EEEEEEEEEEEHHHHHHHHHHC-GGGHHHHSCHHHHHHHHHTC-------CHHHHHHHHHHHHHHHHHHHHHHHHHTTCC T ss_pred EEEEEEEEEEEHHHHHHHHHHC-HHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC T ss_conf 7999957724769999999868-448988589999999997302024444220001017999999999999999875356 Q ss_pred CCC----CCCCCEEEEEECCCCCEEEEECHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEEEE Q ss_conf 789----874310799988888749999758999999614677712899998717976899999873 Q gi|254780938|r 67 ISK----GVSWKDIEVCHFPGGKPYISISGRASDVLSSLVPKGYKPVVHLTISDDFPFAQAFVVIES 129 (132) Q Consensus 67 ~~~----~~~~~dIeI~~~~~G~P~i~l~~~~~~~~~~~~~~~~~~~i~iSiSHd~~~A~A~vIlE~ 129 (132) ++. +++|+||||.++++|+|++.|+|.+++++++++.. .+|||||||++||+|+|+++. T Consensus 83 ~~~~~~~gi~~~dIeI~~~~~G~P~l~l~g~a~~~~~~~gi~----~i~lSISHdk~~~~~~~~~~~ 145 (163) T 2qg8_A 83 LSSISKYGLSMNDIEIKNDKYGKPHVYLYGKAKKVAYEMGIV----KIFLSISDEKIINSQTNNISS 145 (163) T ss_dssp BC-----CBCGGGEEEEECTTSCEEEEECHHHHHHHHHTTCC----EEEEEEEEEEC---------- T ss_pred CCCCCCCCCCEEEEEEEECCCCCCEEEECHHHHHHHHHCCCC----EEEEEECCCCCCHHHCCCCCC T ss_conf 654567885315899998899992899898999999986998----699973167811211124221 No 5 >3hyk_A Holo-[acyl-carrier-protein] synthase; structural genomics, infectious diseases, center for structural genomics of infectious diseases; HET: MSE A3P; 2.31A {Bacillus anthracis} Probab=100.00 E-value=6.5e-43 Score=264.19 Aligned_cols=114 Identities=46% Similarity=0.623 Sum_probs=105.4 Q ss_pred CEEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC--CCCCCCCCEEEECCCEEEEECCCCCCCCCCCEEEE Q ss_conf 9679976544589999999742276898751978899984036--87420011123121123464066789874310799 Q gi|254780938|r 1 MIIGIGSDIVSIQRISRLLQSFNRKFESRCFSSLEQDVCDLSC--NRVASYAKRFAAKEAFSKAIGTGISKGVSWKDIEV 78 (132) Q Consensus 1 MI~GIG~Div~i~Ri~~~l~~~~~~f~~ri~t~~E~~~~~~~~--~~~~~lAgrfAaKEA~~KAlg~g~~~~~~~~dIeI 78 (132) ||+|||+|||+++||++++++ +++|++|+||+.|++||...+ ++.++||||||||||++||||+|++.+++|+|||| T Consensus 4 MI~GIGiDiv~i~Ri~~~l~~-~~~f~~rift~~E~~~~~~~~~~~~~~~lAgrfAaKEAv~Kalg~g~~~~~~~~dieI 82 (122) T 3hyk_A 4 MIVGIGIDIIELNRIEKMLDG-KLKFMERILTENERNVAKGLKGSRLTEFVAGRFAAKEAYSKAVGTGIGKEVSFLDIEV 82 (122) T ss_dssp SEEEEEEEEEEHHHHHHHHC----CHHHHHSCHHHHHHHTTCCTHHHHHHHHHHHHHHHHHHHHHTSCSSSSCCGGGCEE T ss_pred CEEEEEEEEEEHHHHHHHHHC-CHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE T ss_conf 689995785688999999863-7439988588889999986320028999999999999999985647788843002899 Q ss_pred EECCCCCEEEEECHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEEEE Q ss_conf 988888749999758999999614677712899998717976899999873 Q gi|254780938|r 79 CHFPGGKPYISISGRASDVLSSLVPKGYKPVVHLTISDDFPFAQAFVVIES 129 (132) Q Consensus 79 ~~~~~G~P~i~l~~~~~~~~~~~~~~~~~~~i~iSiSHd~~~A~A~vIlE~ 129 (132) ++|++|+|++.+++. ..+|||||||++||+|+||+|+ T Consensus 83 ~~~~~G~P~~~~~~~--------------~~i~vSISH~~~~AvA~vi~E~ 119 (122) T 3hyk_A 83 RNDDRGKPILITSTE--------------HIVHLSISHSKEFAVAQVVLES 119 (122) T ss_dssp EECTTSCEEEECSCS--------------SEEEEEEEECSSEEEEEEEEEC T ss_pred EECCCCCCEEEECCC--------------EEEEEEEECCCCCEEEEEEEEE T ss_conf 989999958997898--------------4899999479986999999997 No 6 >3ne9_A Phosphopantethiene protein transferase, PPT1P; acyl carrier protein synthase, acyl carrier protein, fatty A synthase, ACPS; 2.50A {Corynebacterium ammoniagenes} Probab=100.00 E-value=5e-42 Score=259.15 Aligned_cols=125 Identities=27% Similarity=0.350 Sum_probs=110.7 Q ss_pred CEEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCC-------------CCCCCCEEEECCCEEEEECCCC Q ss_conf 967997654458999999974227689875197889998403687-------------4200111231211234640667 Q gi|254780938|r 1 MIIGIGSDIVSIQRISRLLQSFNRKFESRCFSSLEQDVCDLSCNR-------------VASYAKRFAAKEAFSKAIGTGI 67 (132) Q Consensus 1 MI~GIG~Div~i~Ri~~~l~~~~~~f~~ri~t~~E~~~~~~~~~~-------------~~~lAgrfAaKEA~~KAlg~g~ 67 (132) |++|||||||+++||+++++++++.| +|+||+.|+++|..+.++ .+|||||||||||++||||+|+ T Consensus 6 ~~lgIG~DIv~i~Ri~~~l~r~~~~~-~Ri~t~~E~~~~~~~~~~~~~~~~~~~~~~~~~~lAgrwAaKEA~~KAlg~g~ 84 (153) T 3ne9_A 6 EAMTVGVDLVHIPGFAEQLSRPGSTF-EQVFSPLERRHAQTRRSAAADATNSSLAGSRTEHLAGRWAAKEAFIKAWSQAI 84 (153) T ss_dssp EEEEEEEEEEEHHHHHHHHHSTTCGG-GTTSCHHHHHHHTSCC-----------CCHHHHHHHHHHHHHHHHHHHHHHHT T ss_pred CCEEEEEEEEEHHHHHHHHHHCHHHH-HHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC T ss_conf 61588885778599999987671688-87579999999874557044444321135677899998999989998842001 Q ss_pred C--------CCCCCCEEEEEECCCCCEEEEECHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEEEE Q ss_conf 8--------9874310799988888749999758999999614677712899998717976899999873 Q gi|254780938|r 68 S--------KGVSWKDIEVCHFPGGKPYISISGRASDVLSSLVPKGYKPVVHLTISDDFPFAQAFVVIES 129 (132) Q Consensus 68 ~--------~~~~~~dIeI~~~~~G~P~i~l~~~~~~~~~~~~~~~~~~~i~iSiSHd~~~A~A~vIlE~ 129 (132) . .+++|+||||+++++|+|++.|+|+..+.+.+... ...+|||||||++||+|+||+|. T Consensus 85 ~~~~~~~~~~~~~~~diei~~~~~G~P~l~l~g~~~~~~~~~~~---~~~i~lSISHd~~yaiA~vIle~ 151 (153) T 3ne9_A 85 YGKPPVIEPDLVNFAEIEVLPDRWGRVALQLKGEVAAKLQESIG---DVELALSISHDGDYATALCLLRY 151 (153) T ss_dssp TTSCCSSCGGGCCGGGEEEEECTTCCEEEEECHHHHHHHHHHTC---CEEEEEEEEEETTEEEEEEEEEE T ss_pred CCCCCCCCCCCCEEEEEEEEECCCCCCEEEECHHHHHHHHHHCC---CCEEEEEEECCCCCEEEEEEEEE T ss_conf 12455456776204689999899999279989899999998649---98399988279884999999997 No 7 >3f09_A Holo-[acyl-carrier-protein] synthase; structural genomics, infectious deseases, cytoplasm, fatty acid biosynthesis, lipid synthesis; 1.82A {Staphylococcus aureus subsp} Probab=100.00 E-value=7.2e-42 Score=258.23 Aligned_cols=113 Identities=40% Similarity=0.577 Sum_probs=104.8 Q ss_pred CEEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC---CCCCCCCEEEECCCEEEEECCCCCCCCCCCEEE Q ss_conf 96799765445899999997422768987519788999840368---742001112312112346406678987431079 Q gi|254780938|r 1 MIIGIGSDIVSIQRISRLLQSFNRKFESRCFSSLEQDVCDLSCN---RVASYAKRFAAKEAFSKAIGTGISKGVSWKDIE 77 (132) Q Consensus 1 MI~GIG~Div~i~Ri~~~l~~~~~~f~~ri~t~~E~~~~~~~~~---~~~~lAgrfAaKEA~~KAlg~g~~~~~~~~dIe 77 (132) ||+|||||||+++||++++++ +++|++|+||+.|+.+|....+ +.++||||||||||++||||+|++.++.|+||| T Consensus 25 MI~GIGiDIv~i~Ri~~ll~~-~~~f~~Rilt~~E~~~~~~~~~~~r~~~~LAgRwAaKEAv~KAlg~g~~~~i~~~dIe 103 (143) T 3f09_A 25 MIHGIGVDLIEIDRIQALYSK-QPKLVERILTKNEQHKFNNFTHEQRKIEFLAGRFATKEAFSKALGTGLGKHVAFNDID 103 (143) T ss_dssp SEEEEEEEEEEHHHHHHHHHT-CGGGHHHHSCHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHHC------CCGGGCC T ss_pred CEEEEEEEEEEHHHHHHHHHH-CHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE T ss_conf 678980670067999999870-9338888699999999985101000799999999999999997465776787741789 Q ss_pred EEECCCCCEEEEECHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEEEE Q ss_conf 9988888749999758999999614677712899998717976899999873 Q gi|254780938|r 78 VCHFPGGKPYISISGRASDVLSSLVPKGYKPVVHLTISDDFPFAQAFVVIES 129 (132) Q Consensus 78 I~~~~~G~P~i~l~~~~~~~~~~~~~~~~~~~i~iSiSHd~~~A~A~vIlE~ 129 (132) |.++++|+|++.++| ..++||||||++||+|+||+|+ T Consensus 104 I~~~~~G~P~l~l~g---------------~~i~vSISH~~~yAiA~vIlEk 140 (143) T 3f09_A 104 CYNDELGKPKIDYEG---------------FIVHVSISHTEHYAMSQVVLEK 140 (143) T ss_dssp EEEC--CCEEECCTT---------------EEEEEEEEECSSEEEEEEEEEE T ss_pred EEECCCCCCEEEECC---------------CEEEEEEECCCCCEEEEEEEEE T ss_conf 998989993899789---------------8899998789997999999983 No 8 >1fth_A ACPS, acyl carrier protein synthase; bacterial fatty acid biosynthesis, acyl carrier synthase, coenzyme A, X-RAY crystallography; HET: A3P; 1.90A {Streptococcus pneumoniae} SCOP: d.150.1.2 PDB: 1fte_A 1ftf_A* Probab=100.00 E-value=1.7e-41 Score=256.08 Aligned_cols=114 Identities=35% Similarity=0.514 Sum_probs=104.6 Q ss_pred CEEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC--CCCCCCCEEEECCCEEEEECCCCCCCCCCCEEEE Q ss_conf 96799765445899999997422768987519788999840368--7420011123121123464066789874310799 Q gi|254780938|r 1 MIIGIGSDIVSIQRISRLLQSFNRKFESRCFSSLEQDVCDLSCN--RVASYAKRFAAKEAFSKAIGTGISKGVSWKDIEV 78 (132) Q Consensus 1 MI~GIG~Div~i~Ri~~~l~~~~~~f~~ri~t~~E~~~~~~~~~--~~~~lAgrfAaKEA~~KAlg~g~~~~~~~~dIeI 78 (132) ||+|||||||+++||+++++++ ++|++|+||+.|+++|...++ +.++||||||||||++||||+|++ +++|+|||| T Consensus 3 MI~GiGiDiv~i~Ri~~~l~~~-~~f~~rift~~E~~~~~~~~~~~~~~~lAgrfAaKEAv~KAlg~g~~-~~~~~dieI 80 (122) T 1fth_A 3 MIVGHGIDIEELASIESAVTRH-EGFAKRVLTALEMERFTSLKGRRQIEYLAGRWSAKEAFSKAMGTGIS-KLGFQDLEV 80 (122) T ss_dssp CEEEEEEEEEEHHHHHHHHHTT-SSHHHHHSCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHTSCSS-SSCGGGCEE T ss_pred EEEEEEEEEEEHHHHHHHHHHC-HHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC-CCCCCEEEE T ss_conf 3899827545869999999877-66898738887888875204430799999999999999998626877-787428999 Q ss_pred EECCCCCEEEEECHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEEEE Q ss_conf 988888749999758999999614677712899998717976899999873 Q gi|254780938|r 79 CHFPGGKPYISISGRASDVLSSLVPKGYKPVVHLTISDDFPFAQAFVVIES 129 (132) Q Consensus 79 ~~~~~G~P~i~l~~~~~~~~~~~~~~~~~~~i~iSiSHd~~~A~A~vIlE~ 129 (132) +|+++|+|++.+++. ...++||||||++||+|+||+|. T Consensus 81 ~~~~~G~P~l~~~~~-------------~~~~~lSISH~~~~aiA~vi~e~ 118 (122) T 1fth_A 81 LNNERGAPYFSQAPF-------------SGKIWLSISHTDQFVTASVILEE 118 (122) T ss_dssp EECTTSCEEEEECSC-------------CSEEEEEEEECSSEEEEEEEEEC T ss_pred EECCCCCEEEEECCC-------------CCEEEEEEECCCCCEEEEEEEEE T ss_conf 999999969998899-------------79799999379997999999996 No 9 >1f7l_A Holo-(acyl carrier protein) synthase; 9-strand pseudo beta barrel protein, COA complex protein, coenzyme A complex, transferase; HET: COA; 1.50A {Bacillus subtilis} SCOP: d.150.1.2 PDB: 1f7t_A 1f80_A* Probab=100.00 E-value=3.8e-41 Score=254.13 Aligned_cols=117 Identities=40% Similarity=0.556 Sum_probs=106.2 Q ss_pred EEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC--CCCCCCCCEEEECCCEEEEECCCCCCCCCCCEEEEE Q ss_conf 679976544589999999742276898751978899984036--874200111231211234640667898743107999 Q gi|254780938|r 2 IIGIGSDIVSIQRISRLLQSFNRKFESRCFSSLEQDVCDLSC--NRVASYAKRFAAKEAFSKAIGTGISKGVSWKDIEVC 79 (132) Q Consensus 2 I~GIG~Div~i~Ri~~~l~~~~~~f~~ri~t~~E~~~~~~~~--~~~~~lAgrfAaKEA~~KAlg~g~~~~~~~~dIeI~ 79 (132) |+|||+|||+++||+++++++ ++|++|+||+.|+++|...+ ++.++||||||||||++||||+|++.++.|+||||+ T Consensus 2 I~GIGiDiv~i~Ri~~~~~~~-~~f~~rift~~E~~~~~~~~~~~~~~~lAgrfAaKEAv~Kalg~g~~~~~~~~dIeI~ 80 (121) T 1f7l_A 2 IYGIGLDITELKRIASMAGRQ-KRFAERILTRSELDQYYELSEKRKNEFLAGRFAAKEAFSKAFGTGIGRQLSFQDIEIR 80 (121) T ss_dssp EEEEEEEEEEHHHHHHHHHHC-TTHHHHHCCHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHTSCSBTTBCGGGCEEE T ss_pred EEEEEEEEEEHHHHHHHHHHC-HHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEE T ss_conf 389998666779999998726-4699984699999999985201279999999999999998635676889875299999 Q ss_pred ECCCCCEEEEECHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEEEECC Q ss_conf 8888874999975899999961467771289999871797689999987302 Q gi|254780938|r 80 HFPGGKPYISISGRASDVLSSLVPKGYKPVVHLTISDDFPFAQAFVVIESLL 131 (132) Q Consensus 80 ~~~~G~P~i~l~~~~~~~~~~~~~~~~~~~i~iSiSHd~~~A~A~vIlE~l~ 131 (132) +|++|+|.+.+++. ....+|||||||++||+|+||+|+|+ T Consensus 81 ~~~~G~P~v~~~~~------------~~~~i~lSISH~~~~A~A~vi~e~~~ 120 (121) T 1f7l_A 81 KDQNGKPYIICTKL------------SPAAVHVSITHTKEYAAAQVVIERLS 120 (121) T ss_dssp ECTTSCEEEEETTT------------EEEEEEEEEEECSSEEEEEEEEEC-- T ss_pred ECCCCCCEEEECCC------------CCCEEEEEEECCCCCEEEEEEEEECC T ss_conf 89999969998468------------78679999908998699888889856 No 10 >2was_A 3-oxoacyl-[acyl-carrier-protein] synthase; COA, FAS, PPT, NAD, NADP, transferase, phosphoprotein, oxidoreductase, lipid synthesis; 1.90A {Saccharomyces cerevisiae} PDB: 2wat_A* 2was_B Probab=100.00 E-value=2.1e-41 Score=255.54 Aligned_cols=119 Identities=29% Similarity=0.379 Sum_probs=112.1 Q ss_pred EEEEEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEEEECCCEEEEECC-CCCCCCCCCEEEEEEC Q ss_conf 799765445899999997422768987519788999840368742001112312112346406-6789874310799988 Q gi|254780938|r 3 IGIGSDIVSIQRISRLLQSFNRKFESRCFSSLEQDVCDLSCNRVASYAKRFAAKEAFSKAIGT-GISKGVSWKDIEVCHF 81 (132) Q Consensus 3 ~GIG~Div~i~Ri~~~l~~~~~~f~~ri~t~~E~~~~~~~~~~~~~lAgrfAaKEA~~KAlg~-g~~~~~~~~dIeI~~~ 81 (132) .|||+|||+++||+ +++++|++|+||+.|++||..++++.++||||||||||++||||+ +++.+++|+||||+++ T Consensus 2 ~GIGiDiv~i~ri~----~~~~~Fl~rift~~E~~~~~~~~~~~~~lA~rfAAKEA~~KAlg~~~~~~~~~~~dIeI~~~ 77 (122) T 2was_A 2 GGVGVDVELITSIN----VENDTFIERNFTPQEIEYCSAQPSVQSSFAGTWSAKEAVFKSLGVKSLGGGAALKDIEIVRV 77 (122) T ss_dssp CCEEEEEEEGGGCC----SSCHHHHHHHSCHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHCC-------CCTTEEEEEE T ss_pred CEEEECCCEEHHHH----HHCHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEC T ss_conf 80626232308877----77868898759999999988279828889999999999997626776668875466999999 Q ss_pred CCCCEEEEECHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEEEE Q ss_conf 888749999758999999614677712899998717976899999873 Q gi|254780938|r 82 PGGKPYISISGRASDVLSSLVPKGYKPVVHLTISDDFPFAQAFVVIES 129 (132) Q Consensus 82 ~~G~P~i~l~~~~~~~~~~~~~~~~~~~i~iSiSHd~~~A~A~vIlE~ 129 (132) ++|+|++.++|.+.+.++.++.. .+|||||||++||+|+||+|+ T Consensus 78 ~~G~P~v~l~g~~~~~~~~~~~~----~~~lSISH~~~~avA~vi~ek 121 (122) T 2was_A 78 NKNAPAVELHGNAKKAAEEAGVT----DVKVSISHDDLQAVAVAVSTK 121 (122) T ss_dssp TTEEEEEEECHHHHHHHHTTTCC----EEEEEEEECSSEEEEEEEEEC T ss_pred CCCCCEEEECHHHHHHHHHCCCC----EEEEEEECCCCCEEEEEEEEE T ss_conf 99993899997999999976998----699999879996999999997 No 11 >3gwm_A Holo-[acyl-carrier-protein] synthase; HOMO-trimer, 9-stand pseudo beta barrel protein, cytoplasm, fatty acid biosynthesis; 1.70A {Mycobacterium smegmatis} PDB: 3h7q_A* 3ne3_B 3ne1_A 3hqj_A* Probab=100.00 E-value=3.1e-41 Score=254.64 Aligned_cols=120 Identities=29% Similarity=0.389 Sum_probs=103.4 Q ss_pred EEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHH-HCCCCCCCCCCCEEEECCCEEEEECCCCCCCC------CCC Q ss_conf 67997654458999999974227689875197889998-40368742001112312112346406678987------431 Q gi|254780938|r 2 IIGIGSDIVSIQRISRLLQSFNRKFESRCFSSLEQDVC-DLSCNRVASYAKRFAAKEAFSKAIGTGISKGV------SWK 74 (132) Q Consensus 2 I~GIG~Div~i~Ri~~~l~~~~~~f~~ri~t~~E~~~~-~~~~~~~~~lAgrfAaKEA~~KAlg~g~~~~~------~~~ 74 (132) |+|||||||+++||++++++++++|. |+||+.|+.+| ....++.+|||||||||||++||||+|+.... .|+ T Consensus 2 I~GIG~Div~i~Ri~~~l~r~~~~f~-r~~~~~E~~~~~~~~~~~~~~lA~rfAaKEA~~KAlg~g~~~~~~~~~~~~~~ 80 (129) T 3gwm_A 2 IVGVGIDLVSIPDFAEQVDRPGTVFA-ETFTPGERRDAADKSSSAARHLAARWAAKEAVIKAWSSSRFSKRPALPEGIHR 80 (129) T ss_dssp EEEEEEEEEEHHHHHHHHTSCCHHHH-TTSCHHHHHHHTSTTSHHHHHHHHHHHHHHHHHHHHHTSTTCCSSSCCTTHHH T ss_pred EEEEEEEEEEHHHHHHHHHHCHHHHH-HHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCE T ss_conf 78995434476999999865436899-98198999999763564489999999999999986402201355555665410 Q ss_pred EEEEEECCCCCEEEEECHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEEEE Q ss_conf 0799988888749999758999999614677712899998717976899999873 Q gi|254780938|r 75 DIEVCHFPGGKPYISISGRASDVLSSLVPKGYKPVVHLTISDDFPFAQAFVVIES 129 (132) Q Consensus 75 dIeI~~~~~G~P~i~l~~~~~~~~~~~~~~~~~~~i~iSiSHd~~~A~A~vIlE~ 129 (132) ||||+|+++|+|++.|+|.+.+.+.. ..+|||||||++||+|+||+|+ T Consensus 81 dIei~~~~~G~P~v~l~g~~~~~~~~-------~~i~lSiSH~~~~A~A~vi~E~ 128 (129) T 3gwm_A 81 DIEVVTDMWGRPKVRLSGEIAKHLED-------VTIHVSLTHEDQTAAAVAIIEE 128 (129) T ss_dssp HEEEEECTTSCEEEEECHHHHHHTTT-------CEEEEEEEEETTEEEEEEEEEC T ss_pred EEEEEECCCCCEEEEECHHHHHHHCC-------CCEEEEECCCCCCEEEEEEEEE T ss_conf 14999898998599999899998388-------9789978279986999999972 No 12 >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* Probab=99.62 E-value=2.2e-17 Score=118.52 Aligned_cols=119 Identities=32% Similarity=0.415 Sum_probs=100.9 Q ss_pred EEEEEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEEEECCCEEEEECCCC-CCCCCCCEEEEEEC Q ss_conf 79976544589999999742276898751978899984036874200111231211234640667-89874310799988 Q gi|254780938|r 3 IGIGSDIVSIQRISRLLQSFNRKFESRCFSSLEQDVCDLSCNRVASYAKRFAAKEAFSKAIGTGI-SKGVSWKDIEVCHF 81 (132) Q Consensus 3 ~GIG~Div~i~Ri~~~l~~~~~~f~~ri~t~~E~~~~~~~~~~~~~lAgrfAaKEA~~KAlg~g~-~~~~~~~dIeI~~~ 81 (132) .|+|+|+..++-+ .-.++-|+.|.||..|++||....+|...|++||++|||++|+|+..- +.+-.++||||..+ T Consensus 1759 ~~mG~d~Eli~s~----~~~~~~F~~Rnft~~e~~~C~~a~~p~~sf~~~Ws~~Eavfk~l~v~~~gaga~L~~iei~qp 1834 (1878) T 2uv9_A 1759 SRVGVDVESVDSI----NIDNEEFISRNFTEREQAYCRRAPNPRASFAGRWTAKEAIFKSLGVASKGAGAAMREIEVIND 1834 (1878) T ss_dssp -------------------------------------------------------------------------------- T ss_pred CCCCHHHHHHHHC----CCCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEECC T ss_conf 4432658887522----445737776224499999998447865333457547998754015556677887565256567 Q ss_pred CCCCEEEEECHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEEEE Q ss_conf 888749999758999999614677712899998717976899999873 Q gi|254780938|r 82 PGGKPYISISGRASDVLSSLVPKGYKPVVHLTISDDFPFAQAFVVIES 129 (132) Q Consensus 82 ~~G~P~i~l~~~~~~~~~~~~~~~~~~~i~iSiSHd~~~A~A~vIlE~ 129 (132) ..|.|.|.|++.+++.....++.. ..|||+|+..-++|.+|.++ T Consensus 1835 ~~~A~~V~L~g~aa~~~~~~GV~p----~aVsigHS~ge~aA~~vA~~ 1878 (1878) T 2uv9_A 1835 ANGAPEVHLHGAAAEAAKQAGVKT----VNVSISHGDLQAVAVAVSRT 1878 (1878) T ss_dssp ------------------------------------------------ T ss_pred CCEEEEEEECHHHHHHHHHCCCCC----CEEEECCCHHHHHHHHCCCC T ss_conf 873048872789999999829936----72784765536888310069 No 13 >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* Probab=99.46 E-value=3.7e-15 Score=105.88 Aligned_cols=118 Identities=29% Similarity=0.398 Sum_probs=98.4 Q ss_pred EEEEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEEEECCCEEEEECCC-CCCCCCCCEEEEEECC Q ss_conf 997654458999999974227689875197889998403687420011123121123464066-7898743107999888 Q gi|254780938|r 4 GIGSDIVSIQRISRLLQSFNRKFESRCFSSLEQDVCDLSCNRVASYAKRFAAKEAFSKAIGTG-ISKGVSWKDIEVCHFP 82 (132) Q Consensus 4 GIG~Div~i~Ri~~~l~~~~~~f~~ri~t~~E~~~~~~~~~~~~~lAgrfAaKEA~~KAlg~g-~~~~~~~~dIeI~~~~ 82 (132) ++|+|...+..+ .-+++-|+.|.||..|++||....++...|+++|++||+++|++|+- .+.+-.++||||..+. T Consensus 1768 ~vGm~~el~~s~----~~~~~~F~~Rn~t~~~~~~c~~a~~p~~~f~~~Ws~~E~v~ks~~~~s~ga~a~l~~iei~qp~ 1843 (1887) T 2uv8_A 1768 GVGVDVELITSI----NVENDTFIERNFTPQEIEYCSAQPSVQSSFAGTWSAKEAVFKSLGVKSLGGGAALKDIEIVRVN 1843 (1887) T ss_dssp -------------------------------------------------------------------------------- T ss_pred CCCCCHHHHHCC----CCCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEECCC T ss_conf 566349998504----5447377752144999999985368543545676689997512366666777766653265778 Q ss_pred CCCEEEEECHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEEEE Q ss_conf 88749999758999999614677712899998717976899999873 Q gi|254780938|r 83 GGKPYISISGRASDVLSSLVPKGYKPVVHLTISDDFPFAQAFVVIES 129 (132) Q Consensus 83 ~G~P~i~l~~~~~~~~~~~~~~~~~~~i~iSiSHd~~~A~A~vIlE~ 129 (132) .|.|.|.|++.+++.....+++. ..|||+|...-++|.+|.++ T Consensus 1844 ~~A~~V~L~ga~a~~~~~~GV~p----~aVsIgHS~gEiaA~~vA~r 1886 (1887) T 2uv8_A 1844 KNAPAVELHGNAKKAAEEAGVTD----VKVSISHDDLQAVAVAVSTK 1886 (1887) T ss_dssp ----------------------------------------------- T ss_pred CCCEEEEECHHHHHHHHHCCCCC----CEEEECCCHHHHHHHHHHCC T ss_conf 61117872789999999819926----72774775459999845267 No 14 >1qr0_A 4'-phosphopantetheinyl transferase SFP; protein-coenzyme A complex; HET: COA; 1.90A {Bacillus subtilis} SCOP: d.150.1.1 d.150.1.1 Probab=98.81 E-value=9.3e-10 Score=75.04 Aligned_cols=103 Identities=20% Similarity=0.190 Sum_probs=74.0 Q ss_pred EEEEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC--CCCCCCCEEEECCCEEEEECCCCCCCCCCCEEEEEEC Q ss_conf 99765445899999997422768987519788999840368--7420011123121123464066789874310799988 Q gi|254780938|r 4 GIGSDIVSIQRISRLLQSFNRKFESRCFSSLEQDVCDLSCN--RVASYAKRFAAKEAFSKAIGTGISKGVSWKDIEVCHF 81 (132) Q Consensus 4 GIG~Div~i~Ri~~~l~~~~~~f~~ri~t~~E~~~~~~~~~--~~~~lAgrfAaKEA~~KAlg~g~~~~~~~~dIeI~~~ 81 (132) .||+||..+.+ ....+.+++||+.|+++....+. +...|..-|++|||++||+|.|+.. .++.+++..+ T Consensus 103 ~vGIDiE~~~~-------~~~~~~~~~f~~~E~~~l~~~~~~~~~~~f~~~Wt~KEA~~K~~G~GL~~--~l~~~~v~~~ 173 (228) T 1qr0_A 103 PIGIDIEKTKP-------ISLEIAKRFFSKTEYSDLLAKDKDEQTDYFYHLWSMKESFIKQEGKGLSL--PLDSFSVRLH 173 (228) T ss_dssp CCEEEEEECCC-------CCHHHHSSSSCHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHCSTTSC--CSSCCEEEEC T ss_pred CCCCCEEECCC-------CHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC--CCCEEEEECC T ss_conf 87650475062-------17999884389999999984997899999999999999999873887677--9744899647 Q ss_pred CCCCEEEEECHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEE Q ss_conf 8887499997589999996146777128999987179768999998 Q gi|254780938|r 82 PGGKPYISISGRASDVLSSLVPKGYKPVVHLTISDDFPFAQAFVVI 127 (132) Q Consensus 82 ~~G~P~i~l~~~~~~~~~~~~~~~~~~~i~iSiSHd~~~A~A~vIl 127 (132) +.+.+.+..... ... +. ..+..-+.+|.+|++.- T Consensus 174 ~~~~~~~~~~~~---------~~~--~~-~~~~~~~~~y~~Av~~~ 207 (228) T 1qr0_A 174 QDGQVSIELPDS---------HSP--CY-IKTYEVDPGYKMAVCAA 207 (228) T ss_dssp GGGCEEEECSCT---------TSC--CE-EEEECSCTTEEEEEEES T ss_pred CCCCEEEEECCC---------CCC--EE-EEEEECCCCEEEEEEEC T ss_conf 877425650688---------887--59-99987599879999985 No 15 >2c43_A Aminoadipate-semialdehyde dehydrogenase- phosphopantetheinyl transferase; fatty acid biosynthesis, phosphopantetheine transferase, coenzyme A; HET: COA; 1.93A {Homo sapiens} PDB: 2byd_A* 2cg5_A* Probab=98.67 E-value=1.3e-10 Score=79.93 Aligned_cols=109 Identities=20% Similarity=0.236 Sum_probs=69.2 Q ss_pred EEEEEEEEHHHHHH-HHHHHHHHHHHHHCCHHHHHHHHCCCCC---CCCCCCEEEECCCEEEEECCCCCCCCCCCEEEEE Q ss_conf 99765445899999-9974227689875197889998403687---4200111231211234640667898743107999 Q gi|254780938|r 4 GIGSDIVSIQRISR-LLQSFNRKFESRCFSSLEQDVCDLSCNR---VASYAKRFAAKEAFSKAIGTGISKGVSWKDIEVC 79 (132) Q Consensus 4 GIG~Div~i~Ri~~-~l~~~~~~f~~ri~t~~E~~~~~~~~~~---~~~lAgrfAaKEA~~KAlg~g~~~~~~~~dIeI~ 79 (132) .|||||..+.|..+ ....+ ..+.+++||+.|+++....++. ...|.-.|+.|||++||+|+|+.. .++.+++. T Consensus 135 ~VGVDIE~i~~~~~~~~~~~-~~l~~~~fs~~E~~~l~~~~~~~~~~~~F~~~WtlKEAyiKA~G~GL~~--~L~~~~f~ 211 (323) T 2c43_A 135 QVGIDIMKTSFPGRGSIPEF-FHIMKRKFTNKEWETIRSFKDEWTQLDMFYRNWALKESFIKAIGVGLGF--ELQRLEFD 211 (323) T ss_dssp EEEEEEEECCCCSSSCHHHH-HHHTGGGSCHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHHHHHTCCSCC--CGGGEEEE T ss_pred CCCCCEEEECCCCCCCHHHH-HHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC--CCCEEEEE T ss_conf 85532277213345554679-9999972999999999857986788999999999999999760888688--97227998 Q ss_pred ECCCC----C----EEEEECHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEE Q ss_conf 88888----7----49999758999999614677712899998717976899999 Q gi|254780938|r 80 HFPGG----K----PYISISGRASDVLSSLVPKGYKPVVHLTISDDFPFAQAFVV 126 (132) Q Consensus 80 ~~~~G----~----P~i~l~~~~~~~~~~~~~~~~~~~i~iSiSHd~~~A~A~vI 126 (132) -++.. + ..+.+.+. ....+.++.. .-+.+|.+|+++ T Consensus 212 ~~~~~~~~~~~~~~~~l~~d~~----------~~~~W~f~~~-~l~~~h~vAVa~ 255 (323) T 2c43_A 212 LSPLNLDIGQVYKETRLFLDGE----------EEKEWAFEES-KIDEHHFVAVAL 255 (323) T ss_dssp CCSSCCCTTCCBCCCEEEETTE----------ECTTEEEEEE-EEETTEEEEEEE T ss_pred ECCCCCCCCCCCCCCEEEECCC----------CCCCEEEEEE-ECCCCEEEEEEE T ss_conf 1676655343555516874588----------7886499998-169997999998 No 16 >2c43_A Aminoadipate-semialdehyde dehydrogenase- phosphopantetheinyl transferase; fatty acid biosynthesis, phosphopantetheine transferase, coenzyme A; HET: COA; 1.93A {Homo sapiens} PDB: 2byd_A* 2cg5_A* Probab=98.18 E-value=4.8e-07 Score=59.56 Aligned_cols=84 Identities=17% Similarity=0.269 Sum_probs=63.2 Q ss_pred HHHHHHCCHHHHHHHHCCC---CCCCCCCCEEEECCCEEEEECCCCCCCCCCCEEEEEECCCCCEEEEECHHHHHHHHHH Q ss_conf 6898751978899984036---8742001112312112346406678987431079998888874999975899999961 Q gi|254780938|r 25 KFESRCFSSLEQDVCDLSC---NRVASYAKRFAAKEAFSKAIGTGISKGVSWKDIEVCHFPGGKPYISISGRASDVLSSL 101 (132) Q Consensus 25 ~f~~ri~t~~E~~~~~~~~---~~~~~lAgrfAaKEA~~KAlg~g~~~~~~~~dIeI~~~~~G~P~i~l~~~~~~~~~~~ 101 (132) .++-++++++|++...... ++.++|+||...+.++.+.+| +.|.+|.+.+++.|||++.-.. T Consensus 44 ~~al~lL~~eE~~R~~rf~~~~Dr~~~L~gRlLlR~~L~~~lg------i~~~~i~~~~~~~GKP~L~~~~--------- 108 (323) T 2c43_A 44 LLAVRSIQPEEKERIGQFVFARDAKAAMAGRLMIRKLVAEKLN------IPWNHIRLQRTAKGKPVLAKDS--------- 108 (323) T ss_dssp HHHHHTSCHHHHHHHHTCSBHHHHHHHHHHHHHHHHHHHHHSC------CCGGGCCEEECTTSCEEECCC---------- T ss_pred HHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC------CCHHHEEEEECCCCCCEEECCC--------- T ss_conf 9999639999999998537899999999999999999999969------7879957863859881760887--------- Q ss_pred CCCCCCEEEEEEEECCCCEEEEEE Q ss_conf 467771289999871797689999 Q gi|254780938|r 102 VPKGYKPVVHLTISDDFPFAQAFV 125 (132) Q Consensus 102 ~~~~~~~~i~iSiSHd~~~A~A~v 125 (132) . .....++.||||+++|++..+ T Consensus 109 ~--~~~~~l~FNISHsg~~vv~a~ 130 (323) T 2c43_A 109 S--NPYPNFNFNISHQGDYAVLAA 130 (323) T ss_dssp ---CCSSSCEEEEEEETTEEEEEE T ss_pred C--CCCCCCEEEEECCCCEEEEEE T ss_conf 7--778875587606658089999 No 17 >1qr0_A 4'-phosphopantetheinyl transferase SFP; protein-coenzyme A complex; HET: COA; 1.90A {Bacillus subtilis} SCOP: d.150.1.1 d.150.1.1 Probab=97.91 E-value=1.5e-06 Score=56.73 Aligned_cols=78 Identities=18% Similarity=0.234 Sum_probs=59.2 Q ss_pred HHHHHHHCCHHHHHHHHCCCC---CCCCCCCEEEECCCEEEEECCCCCCCCCCCEEEEEECCCCCEEEEECHHHHHHHHH Q ss_conf 768987519788999840368---74200111231211234640667898743107999888887499997589999996 Q gi|254780938|r 24 RKFESRCFSSLEQDVCDLSCN---RVASYAKRFAAKEAFSKAIGTGISKGVSWKDIEVCHFPGGKPYISISGRASDVLSS 100 (132) Q Consensus 24 ~~f~~ri~t~~E~~~~~~~~~---~~~~lAgrfAaKEA~~KAlg~g~~~~~~~~dIeI~~~~~G~P~i~l~~~~~~~~~~ 100 (132) ++++ .+++++|++....... +.+++++|...+.++.+-+| +.+.++++.++++|+|++. + T Consensus 18 ~~~~-~~Ls~~e~~r~~~~~~~~dr~~~l~~r~llr~~l~~~~~------~~~~~i~~~~~~~GkP~l~--~-------- 80 (228) T 1qr0_A 18 ERFM-TFISPEKREKCRRFYHKEDAHRTLLGDVLVRSVISRQYQ------LDKSDIRFSTQEYGKPCIP--D-------- 80 (228) T ss_dssp HHHH-TTSCHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHHTT------CCGGGCCCEECTTSCEECT--T-------- T ss_pred HHHH-HHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC------CCHHHCEEECCCCCCCEEC--C-------- T ss_conf 9998-559999999998538999999999999999999999979------4879927852979898705--9-------- Q ss_pred HCCCCCCEEEEEEEECCCCEEEEE Q ss_conf 146777128999987179768999 Q gi|254780938|r 101 LVPKGYKPVVHLTISDDFPFAQAF 124 (132) Q Consensus 101 ~~~~~~~~~i~iSiSHd~~~A~A~ 124 (132) . ..+++||||+++++++. T Consensus 81 --~----~~~~fsiSHs~~~v~~a 98 (228) T 1qr0_A 81 --L----PDAHFNISHSGRWVIGA 98 (228) T ss_dssp --C----TTCEEEEEEETTEEEEE T ss_pred --C----CCCEEEECCCCCCEEEE T ss_conf --9----99869866768807999 Done!