Query         gi|254780938|ref|YP_003065351.1| 4'-phosphopantetheinyl transferase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 132
No_of_seqs    121 out of 1825
Neff          6.6 
Searched_HMMs 23785
Date          Tue May 31 23:46:10 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 254780938.hhm -d /home/congqian_1/database/pdb/pdb70.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3h88_A Holo-[acyl-carrier-prot 100.0       0       0  293.9  12.1  125    1-129     4-128 (129)
  2 2bdd_A ACP-synthase; structura 100.0 1.8E-44       0  273.0   8.2  123    1-128    23-163 (182)
  3 2wds_A Holo-[acyl-carrier-prot 100.0 2.7E-44       0  272.2   8.8  122    1-129    22-143 (143)
  4 2qg8_A Acyl carrier protein sy 100.0 2.5E-44       0  272.3   8.3  124    1-129     4-145 (163)
  5 3hyk_A Holo-[acyl-carrier-prot 100.0 6.5E-43       0  264.2   7.6  114    1-129     4-119 (122)
  6 3ne9_A Phosphopantethiene prot 100.0   5E-42       0  259.1   9.7  125    1-129     6-151 (153)
  7 3f09_A Holo-[acyl-carrier-prot 100.0 7.2E-42       0  258.2   7.6  113    1-129    25-140 (143)
  8 1fth_A ACPS, acyl carrier prot 100.0 1.7E-41 1.4E-45  256.1   9.1  114    1-129     3-118 (122)
  9 1f7l_A Holo-(acyl carrier prot 100.0 3.8E-41 1.4E-45  254.1   9.1  117    2-131     2-120 (121)
 10 2was_A 3-oxoacyl-[acyl-carrier 100.0 2.1E-41 1.4E-45  255.5   5.7  119    3-129     2-121 (122)
 11 3gwm_A Holo-[acyl-carrier-prot 100.0 3.1E-41 1.4E-45  254.6   6.2  120    2-129     2-128 (129)
 12 2uv9_A Fatty acid synthase alp  99.6 2.2E-17 9.4E-22  118.5   0.0  119    3-129  1759-1878(1878)
 13 2uv8_A Fatty acid synthase sub  99.5 3.7E-15 1.5E-19  105.9   0.0  118    4-129  1768-1886(1887)
 14 1qr0_A 4'-phosphopantetheinyl   98.8 9.3E-10 3.9E-14   75.0   2.1  103    4-127   103-207 (228)
 15 2c43_A Aminoadipate-semialdehy  98.7 1.3E-10 5.4E-15   79.9  -5.9  109    4-126   135-255 (323)
 16 2c43_A Aminoadipate-semialdehy  98.2 4.8E-07   2E-11   59.6   2.3   84   25-125    44-130 (323)
 17 1qr0_A 4'-phosphopantetheinyl   97.9 1.5E-06 6.4E-11   56.7   0.5   78   24-124    18-98  (228)

No 1  
>3h88_A Holo-[acyl-carrier-protein] synthase; alpha-beta structure, structural genomics of infectious diseases, cytoplasm, fatty acid biosynthesis; HET: COA; 1.85A {Vibrio cholerae}
Probab=100.00  E-value=0  Score=293.92  Aligned_cols=125  Identities=40%  Similarity=0.616  Sum_probs=121.1

Q ss_pred             CEEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEEEECCCEEEEECCCCCCCCCCCEEEEEE
Q ss_conf             96799765445899999997422768987519788999840368742001112312112346406678987431079998
Q gi|254780938|r    1 MIIGIGSDIVSIQRISRLLQSFNRKFESRCFSSLEQDVCDLSCNRVASYAKRFAAKEAFSKAIGTGISKGVSWKDIEVCH   80 (132)
Q Consensus         1 MI~GIG~Div~i~Ri~~~l~~~~~~f~~ri~t~~E~~~~~~~~~~~~~lAgrfAaKEA~~KAlg~g~~~~~~~~dIeI~~   80 (132)
                      ||+|||||||+++||++++++++++|++|+||+.|+++|..++++.++||||||||||++||||+|++.+++|+||||++
T Consensus         4 MI~GIGiDiv~i~Ri~~~l~~~~~~f~~rift~~E~~~~~~~~~~~~~lAgRfAaKEAv~KAlg~g~~~~~~~~dIeI~~   83 (129)
T 3h88_A            4 MIVGLGTDIAEIERVEKALARSGENFARRILTDSELEQFHASKQQGRFLAKRFAAKEAASKALGTGIAQGVTFHDFTISH   83 (129)
T ss_dssp             CEEEEEEEEEEHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHTTSCSCTTCCGGGEEEEE
T ss_pred             CEEEEEEEEEEHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEE
T ss_conf             68998168238799999998637889997799999999884678388999999999999998365677998660999999


Q ss_pred             CCCCCEEEEECHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEEEE
Q ss_conf             8888749999758999999614677712899998717976899999873
Q gi|254780938|r   81 FPGGKPYISISGRASDVLSSLVPKGYKPVVHLTISDDFPFAQAFVVIES  129 (132)
Q Consensus        81 ~~~G~P~i~l~~~~~~~~~~~~~~~~~~~i~iSiSHd~~~A~A~vIlE~  129 (132)
                      |++|+|.+.++|.+.+.++.++..    .+|||||||++||+|+||+|+
T Consensus        84 ~~~G~P~v~l~g~~~~~~~~~~~~----~i~vSISH~~~~AiA~vile~  128 (129)
T 3h88_A           84 DKLGKPLLILSGQAAELASQLQVE----NIHLSISDERHYAMATVILER  128 (129)
T ss_dssp             CTTSCEEEEECHHHHHHHHHTTCC----EEEEEEEECSSEEEEEEEEEC
T ss_pred             CCCCCEEEEECHHHHHHHHHCCCC----EEEEEEECCCCCEEEEEEEEE
T ss_conf             999990689786999999975998----399988589981999999998


No 2  
>2bdd_A ACP-synthase; structural genomics, structural genomics consortium, SGC, transferase; 2.28A {Plasmodium yoelii yoelii}
Probab=100.00  E-value=1.8e-44  Score=273.04  Aligned_cols=123  Identities=33%  Similarity=0.462  Sum_probs=113.1

Q ss_pred             CEEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC--------------CCCCCCCEEEECCCEEEEECCC
Q ss_conf             96799765445899999997422768987519788999840368--------------7420011123121123464066
Q gi|254780938|r    1 MIIGIGSDIVSIQRISRLLQSFNRKFESRCFSSLEQDVCDLSCN--------------RVASYAKRFAAKEAFSKAIGTG   66 (132)
Q Consensus         1 MI~GIG~Div~i~Ri~~~l~~~~~~f~~ri~t~~E~~~~~~~~~--------------~~~~lAgrfAaKEA~~KAlg~g   66 (132)
                      ||+|||||||+++||++++++ +++|++|+||+.|+.+|..+.+              +.++||||||||||++||||+|
T Consensus        23 MI~GIGiDIV~I~Ri~~ll~r-~~rFl~RIft~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~LAgRFAAKEAv~KALGtG  101 (182)
T 2bdd_A           23 HIIGIGTDILCVNRIYKILEK-NINFIKKVLNPFELAEFETQKKKLNEKINKSNELKKLAIYVSKKFAAKEAILKSMGRG  101 (182)
T ss_dssp             EEEEEEEEEEEHHHHHHHHHH-CTTHHHHHSCHHHHHHHHTC-----------CHHHHHHHHHHHHHHHHHHHHHHTTC-
T ss_pred             EEEEEEEEEEEHHHHHHHHHH-CHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             389995660287999999986-8348988299999999997312014444210000007899999999999999874356


Q ss_pred             CCC----CCCCCEEEEEECCCCCEEEEECHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEEE
Q ss_conf             789----87431079998888874999975899999961467771289999871797689999987
Q gi|254780938|r   67 ISK----GVSWKDIEVCHFPGGKPYISISGRASDVLSSLVPKGYKPVVHLTISDDFPFAQAFVVIE  128 (132)
Q Consensus        67 ~~~----~~~~~dIeI~~~~~G~P~i~l~~~~~~~~~~~~~~~~~~~i~iSiSHd~~~A~A~vIlE  128 (132)
                      ++.    +++|+||||+++++|+|++.|+|.+++++.+++..    .+|||||||++||+|++++.
T Consensus       102 ~~~~~~~gi~~~DIeV~~~~~GkP~l~l~g~a~~~~~~~gi~----~i~lSISHek~~a~a~~~~~  163 (182)
T 2bdd_A          102 LSSISKYGLSMNDIEIKNDKYGKPHVYLYGKAKKVAYEMGIV----KIFLSISDEKIINSQTNNIS  163 (182)
T ss_dssp             --------CCGGGEEEEECTTSCEEEEECHHHHHHHHHHTCC----EEEEEEEEEC----------
T ss_pred             CCCCCCCCCCEEEEEEEECCCCCEEEEECHHHHHHHHHCCCC----EEEEEEECCCCCHHHCCCCC
T ss_conf             555566884404899998899990899898999999986998----69998506883111105501


No 3  
>2wds_A Holo-[acyl-carrier-protein] synthase; phosphopantetheine ARM, fatty acid biosynthesis, lipid synthesis, transferase, polyketides; HET: COA; 1.35A {Streptomyces coelicolor} PDB: 2wdo_A* 2jca_A 2jbz_A* 2wdy_A*
Probab=100.00  E-value=2.7e-44  Score=272.16  Aligned_cols=122  Identities=34%  Similarity=0.481  Sum_probs=115.2

Q ss_pred             CEEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEEEECCCEEEEECCCCCCCCCCCEEEEEE
Q ss_conf             96799765445899999997422768987519788999840368742001112312112346406678987431079998
Q gi|254780938|r    1 MIIGIGSDIVSIQRISRLLQSFNRKFESRCFSSLEQDVCDLSCNRVASYAKRFAAKEAFSKAIGTGISKGVSWKDIEVCH   80 (132)
Q Consensus         1 MI~GIG~Div~i~Ri~~~l~~~~~~f~~ri~t~~E~~~~~~~~~~~~~lAgrfAaKEA~~KAlg~g~~~~~~~~dIeI~~   80 (132)
                      +|+|||||||+++||+++++++ ++|++|+||+.|+++|.+++++.++||+|||||||++||||+|  .+++|+||||++
T Consensus        22 ~I~GIGiDIv~i~Ri~~~l~r~-~~f~~Rift~~E~~~~~~~~~~~~~lA~rfAaKEAv~KAlG~g--~gi~~~dIeI~~   98 (143)
T 2wds_A           22 SIIGVGIDVAEVERFGAALERT-PALAGRLFLESELLLPGGERRGVASLAARFAAKEALAKALGAP--AGLLWTDAEVWV   98 (143)
T ss_dssp             CEEEEEEEEEEHHHHHHHHHHC-TTHHHHHCCGGGGBCTTSSBCCHHHHHHHHHHHHHHHHHTTCC--TTCCGGGEEEEE
T ss_pred             EEEEEEEEEEEHHHHHHHHHHC-HHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC--CCCCCEEEEEEE
T ss_conf             8889948833769999999867-5688884999999998845781889999999999999761765--688836999998


Q ss_pred             CCCCCEEEEECHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEEEE
Q ss_conf             8888749999758999999614677712899998717976899999873
Q gi|254780938|r   81 FPGGKPYISISGRASDVLSSLVPKGYKPVVHLTISDDFPFAQAFVVIES  129 (132)
Q Consensus        81 ~~~G~P~i~l~~~~~~~~~~~~~~~~~~~i~iSiSHd~~~A~A~vIlE~  129 (132)
                      +++|+|++.++|.+++++++++..    .+|||||||++||+|+||+|-
T Consensus        99 ~~~G~P~v~l~g~~~~~~~~~~~~----~i~vSISHd~~~AiA~VI~Eg  143 (143)
T 2wds_A           99 EAGGRPRLRVTGTVAARAAELGVA----SWHVSLSADAGIASAVVIAEG  143 (143)
T ss_dssp             CTTSCEEEEECHHHHHHHHHHTCC----EEEEEEEEETTEEEEEEEEEC
T ss_pred             CCCCCCEEEECHHHHHHHHHCCCC----EEEEEEECCCCEEEEEEEEEC
T ss_conf             989993589887999999986999----799989568880999999939


No 4  
>2qg8_A Acyl carrier protein synthase PY06285; malaria, 3'5'ADP, SGC, structural genomics consortium, transferase; HET: A3P; 2.00A {Plasmodium yoelii yoelii}
Probab=100.00  E-value=2.5e-44  Score=272.27  Aligned_cols=124  Identities=32%  Similarity=0.459  Sum_probs=113.5

Q ss_pred             CEEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCC--------------CCCCCCEEEECCCEEEEECCC
Q ss_conf             967997654458999999974227689875197889998403687--------------420011123121123464066
Q gi|254780938|r    1 MIIGIGSDIVSIQRISRLLQSFNRKFESRCFSSLEQDVCDLSCNR--------------VASYAKRFAAKEAFSKAIGTG   66 (132)
Q Consensus         1 MI~GIG~Div~i~Ri~~~l~~~~~~f~~ri~t~~E~~~~~~~~~~--------------~~~lAgrfAaKEA~~KAlg~g   66 (132)
                      ||+|||+|||+++||+++++++ ++|++|+||+.|+++|..+.++              .+|||||||||||++||||||
T Consensus         4 mI~GIGiDIV~i~Ri~~ll~r~-~~fl~Rift~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~lAgRfAAKEAv~KAlGtg   82 (163)
T 2qg8_A            4 HIIGIGTDILCVNRIYKILEKN-INFIKKVLNPFELAEFETQKKKLNEKINKSNELKKLAIYVSKKFAAKEAILKSMGRG   82 (163)
T ss_dssp             EEEEEEEEEEEHHHHHHHHHHC-GGGHHHHSCHHHHHHHHHTC-------CHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             EEEEEEEEEEEHHHHHHHHHHC-HHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             7999957724769999999868-448988589999999997302024444220001017999999999999999875356


Q ss_pred             CCC----CCCCCEEEEEECCCCCEEEEECHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEEEE
Q ss_conf             789----874310799988888749999758999999614677712899998717976899999873
Q gi|254780938|r   67 ISK----GVSWKDIEVCHFPGGKPYISISGRASDVLSSLVPKGYKPVVHLTISDDFPFAQAFVVIES  129 (132)
Q Consensus        67 ~~~----~~~~~dIeI~~~~~G~P~i~l~~~~~~~~~~~~~~~~~~~i~iSiSHd~~~A~A~vIlE~  129 (132)
                      ++.    +++|+||||.++++|+|++.|+|.+++++++++..    .+|||||||++||+|+|+++.
T Consensus        83 ~~~~~~~gi~~~dIeI~~~~~G~P~l~l~g~a~~~~~~~gi~----~i~lSISHdk~~~~~~~~~~~  145 (163)
T 2qg8_A           83 LSSISKYGLSMNDIEIKNDKYGKPHVYLYGKAKKVAYEMGIV----KIFLSISDEKIINSQTNNISS  145 (163)
T ss_dssp             BC-----CBCGGGEEEEECTTSCEEEEECHHHHHHHHHTTCC----EEEEEEEEEEC----------
T ss_pred             CCCCCCCCCCEEEEEEEECCCCCCEEEECHHHHHHHHHCCCC----EEEEEECCCCCCHHHCCCCCC
T ss_conf             654567885315899998899992899898999999986998----699973167811211124221


No 5  
>3hyk_A Holo-[acyl-carrier-protein] synthase; structural genomics, infectious diseases, center for structural genomics of infectious diseases; HET: MSE A3P; 2.31A {Bacillus anthracis}
Probab=100.00  E-value=6.5e-43  Score=264.19  Aligned_cols=114  Identities=46%  Similarity=0.623  Sum_probs=105.4

Q ss_pred             CEEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC--CCCCCCCCEEEECCCEEEEECCCCCCCCCCCEEEE
Q ss_conf             9679976544589999999742276898751978899984036--87420011123121123464066789874310799
Q gi|254780938|r    1 MIIGIGSDIVSIQRISRLLQSFNRKFESRCFSSLEQDVCDLSC--NRVASYAKRFAAKEAFSKAIGTGISKGVSWKDIEV   78 (132)
Q Consensus         1 MI~GIG~Div~i~Ri~~~l~~~~~~f~~ri~t~~E~~~~~~~~--~~~~~lAgrfAaKEA~~KAlg~g~~~~~~~~dIeI   78 (132)
                      ||+|||+|||+++||++++++ +++|++|+||+.|++||...+  ++.++||||||||||++||||+|++.+++|+||||
T Consensus         4 MI~GIGiDiv~i~Ri~~~l~~-~~~f~~rift~~E~~~~~~~~~~~~~~~lAgrfAaKEAv~Kalg~g~~~~~~~~dieI   82 (122)
T 3hyk_A            4 MIVGIGIDIIELNRIEKMLDG-KLKFMERILTENERNVAKGLKGSRLTEFVAGRFAAKEAYSKAVGTGIGKEVSFLDIEV   82 (122)
T ss_dssp             SEEEEEEEEEEHHHHHHHHC----CHHHHHSCHHHHHHHTTCCTHHHHHHHHHHHHHHHHHHHHHTSCSSSSCCGGGCEE
T ss_pred             CEEEEEEEEEEHHHHHHHHHC-CHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE
T ss_conf             689995785688999999863-7439988588889999986320028999999999999999985647788843002899


Q ss_pred             EECCCCCEEEEECHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEEEE
Q ss_conf             988888749999758999999614677712899998717976899999873
Q gi|254780938|r   79 CHFPGGKPYISISGRASDVLSSLVPKGYKPVVHLTISDDFPFAQAFVVIES  129 (132)
Q Consensus        79 ~~~~~G~P~i~l~~~~~~~~~~~~~~~~~~~i~iSiSHd~~~A~A~vIlE~  129 (132)
                      ++|++|+|++.+++.              ..+|||||||++||+|+||+|+
T Consensus        83 ~~~~~G~P~~~~~~~--------------~~i~vSISH~~~~AvA~vi~E~  119 (122)
T 3hyk_A           83 RNDDRGKPILITSTE--------------HIVHLSISHSKEFAVAQVVLES  119 (122)
T ss_dssp             EECTTSCEEEECSCS--------------SEEEEEEEECSSEEEEEEEEEC
T ss_pred             EECCCCCCEEEECCC--------------EEEEEEEECCCCCEEEEEEEEE
T ss_conf             989999958997898--------------4899999479986999999997


No 6  
>3ne9_A Phosphopantethiene protein transferase, PPT1P; acyl carrier protein synthase, acyl carrier protein, fatty A synthase, ACPS; 2.50A {Corynebacterium ammoniagenes}
Probab=100.00  E-value=5e-42  Score=259.15  Aligned_cols=125  Identities=27%  Similarity=0.350  Sum_probs=110.7

Q ss_pred             CEEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCC-------------CCCCCCEEEECCCEEEEECCCC
Q ss_conf             967997654458999999974227689875197889998403687-------------4200111231211234640667
Q gi|254780938|r    1 MIIGIGSDIVSIQRISRLLQSFNRKFESRCFSSLEQDVCDLSCNR-------------VASYAKRFAAKEAFSKAIGTGI   67 (132)
Q Consensus         1 MI~GIG~Div~i~Ri~~~l~~~~~~f~~ri~t~~E~~~~~~~~~~-------------~~~lAgrfAaKEA~~KAlg~g~   67 (132)
                      |++|||||||+++||+++++++++.| +|+||+.|+++|..+.++             .+|||||||||||++||||+|+
T Consensus         6 ~~lgIG~DIv~i~Ri~~~l~r~~~~~-~Ri~t~~E~~~~~~~~~~~~~~~~~~~~~~~~~~lAgrwAaKEA~~KAlg~g~   84 (153)
T 3ne9_A            6 EAMTVGVDLVHIPGFAEQLSRPGSTF-EQVFSPLERRHAQTRRSAAADATNSSLAGSRTEHLAGRWAAKEAFIKAWSQAI   84 (153)
T ss_dssp             EEEEEEEEEEEHHHHHHHHHSTTCGG-GTTSCHHHHHHHTSCC-----------CCHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEEEEEEHHHHHHHHHHCHHHH-HHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             61588885778599999987671688-87579999999874557044444321135677899998999989998842001


Q ss_pred             C--------CCCCCCEEEEEECCCCCEEEEECHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEEEE
Q ss_conf             8--------9874310799988888749999758999999614677712899998717976899999873
Q gi|254780938|r   68 S--------KGVSWKDIEVCHFPGGKPYISISGRASDVLSSLVPKGYKPVVHLTISDDFPFAQAFVVIES  129 (132)
Q Consensus        68 ~--------~~~~~~dIeI~~~~~G~P~i~l~~~~~~~~~~~~~~~~~~~i~iSiSHd~~~A~A~vIlE~  129 (132)
                      .        .+++|+||||+++++|+|++.|+|+..+.+.+...   ...+|||||||++||+|+||+|.
T Consensus        85 ~~~~~~~~~~~~~~~diei~~~~~G~P~l~l~g~~~~~~~~~~~---~~~i~lSISHd~~yaiA~vIle~  151 (153)
T 3ne9_A           85 YGKPPVIEPDLVNFAEIEVLPDRWGRVALQLKGEVAAKLQESIG---DVELALSISHDGDYATALCLLRY  151 (153)
T ss_dssp             TTSCCSSCGGGCCGGGEEEEECTTCCEEEEECHHHHHHHHHHTC---CEEEEEEEEEETTEEEEEEEEEE
T ss_pred             CCCCCCCCCCCCEEEEEEEEECCCCCCEEEECHHHHHHHHHHCC---CCEEEEEEECCCCCEEEEEEEEE
T ss_conf             12455456776204689999899999279989899999998649---98399988279884999999997


No 7  
>3f09_A Holo-[acyl-carrier-protein] synthase; structural genomics, infectious deseases, cytoplasm, fatty acid biosynthesis, lipid synthesis; 1.82A {Staphylococcus aureus subsp}
Probab=100.00  E-value=7.2e-42  Score=258.23  Aligned_cols=113  Identities=40%  Similarity=0.577  Sum_probs=104.8

Q ss_pred             CEEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC---CCCCCCCEEEECCCEEEEECCCCCCCCCCCEEE
Q ss_conf             96799765445899999997422768987519788999840368---742001112312112346406678987431079
Q gi|254780938|r    1 MIIGIGSDIVSIQRISRLLQSFNRKFESRCFSSLEQDVCDLSCN---RVASYAKRFAAKEAFSKAIGTGISKGVSWKDIE   77 (132)
Q Consensus         1 MI~GIG~Div~i~Ri~~~l~~~~~~f~~ri~t~~E~~~~~~~~~---~~~~lAgrfAaKEA~~KAlg~g~~~~~~~~dIe   77 (132)
                      ||+|||||||+++||++++++ +++|++|+||+.|+.+|....+   +.++||||||||||++||||+|++.++.|+|||
T Consensus        25 MI~GIGiDIv~i~Ri~~ll~~-~~~f~~Rilt~~E~~~~~~~~~~~r~~~~LAgRwAaKEAv~KAlg~g~~~~i~~~dIe  103 (143)
T 3f09_A           25 MIHGIGVDLIEIDRIQALYSK-QPKLVERILTKNEQHKFNNFTHEQRKIEFLAGRFATKEAFSKALGTGLGKHVAFNDID  103 (143)
T ss_dssp             SEEEEEEEEEEHHHHHHHHHT-CGGGHHHHSCHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHHC------CCGGGCC
T ss_pred             CEEEEEEEEEEHHHHHHHHHH-CHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
T ss_conf             678980670067999999870-9338888699999999985101000799999999999999997465776787741789


Q ss_pred             EEECCCCCEEEEECHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEEEE
Q ss_conf             9988888749999758999999614677712899998717976899999873
Q gi|254780938|r   78 VCHFPGGKPYISISGRASDVLSSLVPKGYKPVVHLTISDDFPFAQAFVVIES  129 (132)
Q Consensus        78 I~~~~~G~P~i~l~~~~~~~~~~~~~~~~~~~i~iSiSHd~~~A~A~vIlE~  129 (132)
                      |.++++|+|++.++|               ..++||||||++||+|+||+|+
T Consensus       104 I~~~~~G~P~l~l~g---------------~~i~vSISH~~~yAiA~vIlEk  140 (143)
T 3f09_A          104 CYNDELGKPKIDYEG---------------FIVHVSISHTEHYAMSQVVLEK  140 (143)
T ss_dssp             EEEC--CCEEECCTT---------------EEEEEEEEECSSEEEEEEEEEE
T ss_pred             EEECCCCCCEEEECC---------------CEEEEEEECCCCCEEEEEEEEE
T ss_conf             998989993899789---------------8899998789997999999983


No 8  
>1fth_A ACPS, acyl carrier protein synthase; bacterial fatty acid biosynthesis, acyl carrier synthase, coenzyme A, X-RAY crystallography; HET: A3P; 1.90A {Streptococcus pneumoniae} SCOP: d.150.1.2 PDB: 1fte_A 1ftf_A*
Probab=100.00  E-value=1.7e-41  Score=256.08  Aligned_cols=114  Identities=35%  Similarity=0.514  Sum_probs=104.6

Q ss_pred             CEEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC--CCCCCCCEEEECCCEEEEECCCCCCCCCCCEEEE
Q ss_conf             96799765445899999997422768987519788999840368--7420011123121123464066789874310799
Q gi|254780938|r    1 MIIGIGSDIVSIQRISRLLQSFNRKFESRCFSSLEQDVCDLSCN--RVASYAKRFAAKEAFSKAIGTGISKGVSWKDIEV   78 (132)
Q Consensus         1 MI~GIG~Div~i~Ri~~~l~~~~~~f~~ri~t~~E~~~~~~~~~--~~~~lAgrfAaKEA~~KAlg~g~~~~~~~~dIeI   78 (132)
                      ||+|||||||+++||+++++++ ++|++|+||+.|+++|...++  +.++||||||||||++||||+|++ +++|+||||
T Consensus         3 MI~GiGiDiv~i~Ri~~~l~~~-~~f~~rift~~E~~~~~~~~~~~~~~~lAgrfAaKEAv~KAlg~g~~-~~~~~dieI   80 (122)
T 1fth_A            3 MIVGHGIDIEELASIESAVTRH-EGFAKRVLTALEMERFTSLKGRRQIEYLAGRWSAKEAFSKAMGTGIS-KLGFQDLEV   80 (122)
T ss_dssp             CEEEEEEEEEEHHHHHHHHHTT-SSHHHHHSCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHTSCSS-SSCGGGCEE
T ss_pred             EEEEEEEEEEEHHHHHHHHHHC-HHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC-CCCCCEEEE
T ss_conf             3899827545869999999877-66898738887888875204430799999999999999998626877-787428999


Q ss_pred             EECCCCCEEEEECHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEEEE
Q ss_conf             988888749999758999999614677712899998717976899999873
Q gi|254780938|r   79 CHFPGGKPYISISGRASDVLSSLVPKGYKPVVHLTISDDFPFAQAFVVIES  129 (132)
Q Consensus        79 ~~~~~G~P~i~l~~~~~~~~~~~~~~~~~~~i~iSiSHd~~~A~A~vIlE~  129 (132)
                      +|+++|+|++.+++.             ...++||||||++||+|+||+|.
T Consensus        81 ~~~~~G~P~l~~~~~-------------~~~~~lSISH~~~~aiA~vi~e~  118 (122)
T 1fth_A           81 LNNERGAPYFSQAPF-------------SGKIWLSISHTDQFVTASVILEE  118 (122)
T ss_dssp             EECTTSCEEEEECSC-------------CSEEEEEEEECSSEEEEEEEEEC
T ss_pred             EECCCCCEEEEECCC-------------CCEEEEEEECCCCCEEEEEEEEE
T ss_conf             999999969998899-------------79799999379997999999996


No 9  
>1f7l_A Holo-(acyl carrier protein) synthase; 9-strand pseudo beta barrel protein, COA complex protein, coenzyme A complex, transferase; HET: COA; 1.50A {Bacillus subtilis} SCOP: d.150.1.2 PDB: 1f7t_A 1f80_A*
Probab=100.00  E-value=3.8e-41  Score=254.13  Aligned_cols=117  Identities=40%  Similarity=0.556  Sum_probs=106.2

Q ss_pred             EEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC--CCCCCCCCEEEECCCEEEEECCCCCCCCCCCEEEEE
Q ss_conf             679976544589999999742276898751978899984036--874200111231211234640667898743107999
Q gi|254780938|r    2 IIGIGSDIVSIQRISRLLQSFNRKFESRCFSSLEQDVCDLSC--NRVASYAKRFAAKEAFSKAIGTGISKGVSWKDIEVC   79 (132)
Q Consensus         2 I~GIG~Div~i~Ri~~~l~~~~~~f~~ri~t~~E~~~~~~~~--~~~~~lAgrfAaKEA~~KAlg~g~~~~~~~~dIeI~   79 (132)
                      |+|||+|||+++||+++++++ ++|++|+||+.|+++|...+  ++.++||||||||||++||||+|++.++.|+||||+
T Consensus         2 I~GIGiDiv~i~Ri~~~~~~~-~~f~~rift~~E~~~~~~~~~~~~~~~lAgrfAaKEAv~Kalg~g~~~~~~~~dIeI~   80 (121)
T 1f7l_A            2 IYGIGLDITELKRIASMAGRQ-KRFAERILTRSELDQYYELSEKRKNEFLAGRFAAKEAFSKAFGTGIGRQLSFQDIEIR   80 (121)
T ss_dssp             EEEEEEEEEEHHHHHHHHHHC-TTHHHHHCCHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHTSCSBTTBCGGGCEEE
T ss_pred             EEEEEEEEEEHHHHHHHHHHC-HHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEE
T ss_conf             389998666779999998726-4699984699999999985201279999999999999998635676889875299999


Q ss_pred             ECCCCCEEEEECHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEEEECC
Q ss_conf             8888874999975899999961467771289999871797689999987302
Q gi|254780938|r   80 HFPGGKPYISISGRASDVLSSLVPKGYKPVVHLTISDDFPFAQAFVVIESLL  131 (132)
Q Consensus        80 ~~~~G~P~i~l~~~~~~~~~~~~~~~~~~~i~iSiSHd~~~A~A~vIlE~l~  131 (132)
                      +|++|+|.+.+++.            ....+|||||||++||+|+||+|+|+
T Consensus        81 ~~~~G~P~v~~~~~------------~~~~i~lSISH~~~~A~A~vi~e~~~  120 (121)
T 1f7l_A           81 KDQNGKPYIICTKL------------SPAAVHVSITHTKEYAAAQVVIERLS  120 (121)
T ss_dssp             ECTTSCEEEEETTT------------EEEEEEEEEEECSSEEEEEEEEEC--
T ss_pred             ECCCCCCEEEECCC------------CCCEEEEEEECCCCCEEEEEEEEECC
T ss_conf             89999969998468------------78679999908998699888889856


No 10 
>2was_A 3-oxoacyl-[acyl-carrier-protein] synthase; COA, FAS, PPT, NAD, NADP, transferase, phosphoprotein, oxidoreductase, lipid synthesis; 1.90A {Saccharomyces cerevisiae} PDB: 2wat_A* 2was_B
Probab=100.00  E-value=2.1e-41  Score=255.54  Aligned_cols=119  Identities=29%  Similarity=0.379  Sum_probs=112.1

Q ss_pred             EEEEEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEEEECCCEEEEECC-CCCCCCCCCEEEEEEC
Q ss_conf             799765445899999997422768987519788999840368742001112312112346406-6789874310799988
Q gi|254780938|r    3 IGIGSDIVSIQRISRLLQSFNRKFESRCFSSLEQDVCDLSCNRVASYAKRFAAKEAFSKAIGT-GISKGVSWKDIEVCHF   81 (132)
Q Consensus         3 ~GIG~Div~i~Ri~~~l~~~~~~f~~ri~t~~E~~~~~~~~~~~~~lAgrfAaKEA~~KAlg~-g~~~~~~~~dIeI~~~   81 (132)
                      .|||+|||+++||+    +++++|++|+||+.|++||..++++.++||||||||||++||||+ +++.+++|+||||+++
T Consensus         2 ~GIGiDiv~i~ri~----~~~~~Fl~rift~~E~~~~~~~~~~~~~lA~rfAAKEA~~KAlg~~~~~~~~~~~dIeI~~~   77 (122)
T 2was_A            2 GGVGVDVELITSIN----VENDTFIERNFTPQEIEYCSAQPSVQSSFAGTWSAKEAVFKSLGVKSLGGGAALKDIEIVRV   77 (122)
T ss_dssp             CCEEEEEEEGGGCC----SSCHHHHHHHSCHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHCC-------CCTTEEEEEE
T ss_pred             CEEEECCCEEHHHH----HHCHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEC
T ss_conf             80626232308877----77868898759999999988279828889999999999997626776668875466999999


Q ss_pred             CCCCEEEEECHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEEEE
Q ss_conf             888749999758999999614677712899998717976899999873
Q gi|254780938|r   82 PGGKPYISISGRASDVLSSLVPKGYKPVVHLTISDDFPFAQAFVVIES  129 (132)
Q Consensus        82 ~~G~P~i~l~~~~~~~~~~~~~~~~~~~i~iSiSHd~~~A~A~vIlE~  129 (132)
                      ++|+|++.++|.+.+.++.++..    .+|||||||++||+|+||+|+
T Consensus        78 ~~G~P~v~l~g~~~~~~~~~~~~----~~~lSISH~~~~avA~vi~ek  121 (122)
T 2was_A           78 NKNAPAVELHGNAKKAAEEAGVT----DVKVSISHDDLQAVAVAVSTK  121 (122)
T ss_dssp             TTEEEEEEECHHHHHHHHTTTCC----EEEEEEEECSSEEEEEEEEEC
T ss_pred             CCCCCEEEECHHHHHHHHHCCCC----EEEEEEECCCCCEEEEEEEEE
T ss_conf             99993899997999999976998----699999879996999999997


No 11 
>3gwm_A Holo-[acyl-carrier-protein] synthase; HOMO-trimer, 9-stand pseudo beta barrel protein, cytoplasm, fatty acid biosynthesis; 1.70A {Mycobacterium smegmatis} PDB: 3h7q_A* 3ne3_B 3ne1_A 3hqj_A*
Probab=100.00  E-value=3.1e-41  Score=254.64  Aligned_cols=120  Identities=29%  Similarity=0.389  Sum_probs=103.4

Q ss_pred             EEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHH-HCCCCCCCCCCCEEEECCCEEEEECCCCCCCC------CCC
Q ss_conf             67997654458999999974227689875197889998-40368742001112312112346406678987------431
Q gi|254780938|r    2 IIGIGSDIVSIQRISRLLQSFNRKFESRCFSSLEQDVC-DLSCNRVASYAKRFAAKEAFSKAIGTGISKGV------SWK   74 (132)
Q Consensus         2 I~GIG~Div~i~Ri~~~l~~~~~~f~~ri~t~~E~~~~-~~~~~~~~~lAgrfAaKEA~~KAlg~g~~~~~------~~~   74 (132)
                      |+|||||||+++||++++++++++|. |+||+.|+.+| ....++.+|||||||||||++||||+|+....      .|+
T Consensus         2 I~GIG~Div~i~Ri~~~l~r~~~~f~-r~~~~~E~~~~~~~~~~~~~~lA~rfAaKEA~~KAlg~g~~~~~~~~~~~~~~   80 (129)
T 3gwm_A            2 IVGVGIDLVSIPDFAEQVDRPGTVFA-ETFTPGERRDAADKSSSAARHLAARWAAKEAVIKAWSSSRFSKRPALPEGIHR   80 (129)
T ss_dssp             EEEEEEEEEEHHHHHHHHTSCCHHHH-TTSCHHHHHHHTSTTSHHHHHHHHHHHHHHHHHHHHHTSTTCCSSSCCTTHHH
T ss_pred             EEEEEEEEEEHHHHHHHHHHCHHHHH-HHHCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCE
T ss_conf             78995434476999999865436899-98198999999763564489999999999999986402201355555665410


Q ss_pred             EEEEEECCCCCEEEEECHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEEEE
Q ss_conf             0799988888749999758999999614677712899998717976899999873
Q gi|254780938|r   75 DIEVCHFPGGKPYISISGRASDVLSSLVPKGYKPVVHLTISDDFPFAQAFVVIES  129 (132)
Q Consensus        75 dIeI~~~~~G~P~i~l~~~~~~~~~~~~~~~~~~~i~iSiSHd~~~A~A~vIlE~  129 (132)
                      ||||+|+++|+|++.|+|.+.+.+..       ..+|||||||++||+|+||+|+
T Consensus        81 dIei~~~~~G~P~v~l~g~~~~~~~~-------~~i~lSiSH~~~~A~A~vi~E~  128 (129)
T 3gwm_A           81 DIEVVTDMWGRPKVRLSGEIAKHLED-------VTIHVSLTHEDQTAAAVAIIEE  128 (129)
T ss_dssp             HEEEEECTTSCEEEEECHHHHHHTTT-------CEEEEEEEEETTEEEEEEEEEC
T ss_pred             EEEEEECCCCCEEEEECHHHHHHHCC-------CCEEEEECCCCCCEEEEEEEEE
T ss_conf             14999898998599999899998388-------9789978279986999999972


No 12 
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*
Probab=99.62  E-value=2.2e-17  Score=118.52  Aligned_cols=119  Identities=32%  Similarity=0.415  Sum_probs=100.9

Q ss_pred             EEEEEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEEEECCCEEEEECCCC-CCCCCCCEEEEEEC
Q ss_conf             79976544589999999742276898751978899984036874200111231211234640667-89874310799988
Q gi|254780938|r    3 IGIGSDIVSIQRISRLLQSFNRKFESRCFSSLEQDVCDLSCNRVASYAKRFAAKEAFSKAIGTGI-SKGVSWKDIEVCHF   81 (132)
Q Consensus         3 ~GIG~Div~i~Ri~~~l~~~~~~f~~ri~t~~E~~~~~~~~~~~~~lAgrfAaKEA~~KAlg~g~-~~~~~~~dIeI~~~   81 (132)
                      .|+|+|+..++-+    .-.++-|+.|.||..|++||....+|...|++||++|||++|+|+..- +.+-.++||||..+
T Consensus      1759 ~~mG~d~Eli~s~----~~~~~~F~~Rnft~~e~~~C~~a~~p~~sf~~~Ws~~Eavfk~l~v~~~gaga~L~~iei~qp 1834 (1878)
T 2uv9_A         1759 SRVGVDVESVDSI----NIDNEEFISRNFTEREQAYCRRAPNPRASFAGRWTAKEAIFKSLGVASKGAGAAMREIEVIND 1834 (1878)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             CCCCHHHHHHHHC----CCCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEECC
T ss_conf             4432658887522----445737776224499999998447865333457547998754015556677887565256567


Q ss_pred             CCCCEEEEECHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEEEE
Q ss_conf             888749999758999999614677712899998717976899999873
Q gi|254780938|r   82 PGGKPYISISGRASDVLSSLVPKGYKPVVHLTISDDFPFAQAFVVIES  129 (132)
Q Consensus        82 ~~G~P~i~l~~~~~~~~~~~~~~~~~~~i~iSiSHd~~~A~A~vIlE~  129 (132)
                      ..|.|.|.|++.+++.....++..    ..|||+|+..-++|.+|.++
T Consensus      1835 ~~~A~~V~L~g~aa~~~~~~GV~p----~aVsigHS~ge~aA~~vA~~ 1878 (1878)
T 2uv9_A         1835 ANGAPEVHLHGAAAEAAKQAGVKT----VNVSISHGDLQAVAVAVSRT 1878 (1878)
T ss_dssp             ------------------------------------------------
T ss_pred             CCEEEEEEECHHHHHHHHHCCCCC----CEEEECCCHHHHHHHHCCCC
T ss_conf             873048872789999999829936----72784765536888310069


No 13 
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*
Probab=99.46  E-value=3.7e-15  Score=105.88  Aligned_cols=118  Identities=29%  Similarity=0.398  Sum_probs=98.4

Q ss_pred             EEEEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEEEECCCEEEEECCC-CCCCCCCCEEEEEECC
Q ss_conf             997654458999999974227689875197889998403687420011123121123464066-7898743107999888
Q gi|254780938|r    4 GIGSDIVSIQRISRLLQSFNRKFESRCFSSLEQDVCDLSCNRVASYAKRFAAKEAFSKAIGTG-ISKGVSWKDIEVCHFP   82 (132)
Q Consensus         4 GIG~Div~i~Ri~~~l~~~~~~f~~ri~t~~E~~~~~~~~~~~~~lAgrfAaKEA~~KAlg~g-~~~~~~~~dIeI~~~~   82 (132)
                      ++|+|...+..+    .-+++-|+.|.||..|++||....++...|+++|++||+++|++|+- .+.+-.++||||..+.
T Consensus      1768 ~vGm~~el~~s~----~~~~~~F~~Rn~t~~~~~~c~~a~~p~~~f~~~Ws~~E~v~ks~~~~s~ga~a~l~~iei~qp~ 1843 (1887)
T 2uv8_A         1768 GVGVDVELITSI----NVENDTFIERNFTPQEIEYCSAQPSVQSSFAGTWSAKEAVFKSLGVKSLGGGAALKDIEIVRVN 1843 (1887)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             CCCCCHHHHHCC----CCCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEECCC
T ss_conf             566349998504----5447377752144999999985368543545676689997512366666777766653265778


Q ss_pred             CCCEEEEECHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEEEE
Q ss_conf             88749999758999999614677712899998717976899999873
Q gi|254780938|r   83 GGKPYISISGRASDVLSSLVPKGYKPVVHLTISDDFPFAQAFVVIES  129 (132)
Q Consensus        83 ~G~P~i~l~~~~~~~~~~~~~~~~~~~i~iSiSHd~~~A~A~vIlE~  129 (132)
                      .|.|.|.|++.+++.....+++.    ..|||+|...-++|.+|.++
T Consensus      1844 ~~A~~V~L~ga~a~~~~~~GV~p----~aVsIgHS~gEiaA~~vA~r 1886 (1887)
T 2uv8_A         1844 KNAPAVELHGNAKKAAEEAGVTD----VKVSISHDDLQAVAVAVSTK 1886 (1887)
T ss_dssp             -----------------------------------------------
T ss_pred             CCCEEEEECHHHHHHHHHCCCCC----CEEEECCCHHHHHHHHHHCC
T ss_conf             61117872789999999819926----72774775459999845267


No 14 
>1qr0_A 4'-phosphopantetheinyl transferase SFP; protein-coenzyme A complex; HET: COA; 1.90A {Bacillus subtilis} SCOP: d.150.1.1 d.150.1.1
Probab=98.81  E-value=9.3e-10  Score=75.04  Aligned_cols=103  Identities=20%  Similarity=0.190  Sum_probs=74.0

Q ss_pred             EEEEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCC--CCCCCCCEEEECCCEEEEECCCCCCCCCCCEEEEEEC
Q ss_conf             99765445899999997422768987519788999840368--7420011123121123464066789874310799988
Q gi|254780938|r    4 GIGSDIVSIQRISRLLQSFNRKFESRCFSSLEQDVCDLSCN--RVASYAKRFAAKEAFSKAIGTGISKGVSWKDIEVCHF   81 (132)
Q Consensus         4 GIG~Div~i~Ri~~~l~~~~~~f~~ri~t~~E~~~~~~~~~--~~~~lAgrfAaKEA~~KAlg~g~~~~~~~~dIeI~~~   81 (132)
                      .||+||..+.+       ....+.+++||+.|+++....+.  +...|..-|++|||++||+|.|+..  .++.+++..+
T Consensus       103 ~vGIDiE~~~~-------~~~~~~~~~f~~~E~~~l~~~~~~~~~~~f~~~Wt~KEA~~K~~G~GL~~--~l~~~~v~~~  173 (228)
T 1qr0_A          103 PIGIDIEKTKP-------ISLEIAKRFFSKTEYSDLLAKDKDEQTDYFYHLWSMKESFIKQEGKGLSL--PLDSFSVRLH  173 (228)
T ss_dssp             CCEEEEEECCC-------CCHHHHSSSSCHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHCSTTSC--CSSCCEEEEC
T ss_pred             CCCCCEEECCC-------CHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC--CCCEEEEECC
T ss_conf             87650475062-------17999884389999999984997899999999999999999873887677--9744899647


Q ss_pred             CCCCEEEEECHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEE
Q ss_conf             8887499997589999996146777128999987179768999998
Q gi|254780938|r   82 PGGKPYISISGRASDVLSSLVPKGYKPVVHLTISDDFPFAQAFVVI  127 (132)
Q Consensus        82 ~~G~P~i~l~~~~~~~~~~~~~~~~~~~i~iSiSHd~~~A~A~vIl  127 (132)
                      +.+.+.+.....         ...  +. ..+..-+.+|.+|++.-
T Consensus       174 ~~~~~~~~~~~~---------~~~--~~-~~~~~~~~~y~~Av~~~  207 (228)
T 1qr0_A          174 QDGQVSIELPDS---------HSP--CY-IKTYEVDPGYKMAVCAA  207 (228)
T ss_dssp             GGGCEEEECSCT---------TSC--CE-EEEECSCTTEEEEEEES
T ss_pred             CCCCEEEEECCC---------CCC--EE-EEEEECCCCEEEEEEEC
T ss_conf             877425650688---------887--59-99987599879999985


No 15 
>2c43_A Aminoadipate-semialdehyde dehydrogenase- phosphopantetheinyl transferase; fatty acid biosynthesis, phosphopantetheine transferase, coenzyme A; HET: COA; 1.93A {Homo sapiens} PDB: 2byd_A* 2cg5_A*
Probab=98.67  E-value=1.3e-10  Score=79.93  Aligned_cols=109  Identities=20%  Similarity=0.236  Sum_probs=69.2

Q ss_pred             EEEEEEEEHHHHHH-HHHHHHHHHHHHHCCHHHHHHHHCCCCC---CCCCCCEEEECCCEEEEECCCCCCCCCCCEEEEE
Q ss_conf             99765445899999-9974227689875197889998403687---4200111231211234640667898743107999
Q gi|254780938|r    4 GIGSDIVSIQRISR-LLQSFNRKFESRCFSSLEQDVCDLSCNR---VASYAKRFAAKEAFSKAIGTGISKGVSWKDIEVC   79 (132)
Q Consensus         4 GIG~Div~i~Ri~~-~l~~~~~~f~~ri~t~~E~~~~~~~~~~---~~~lAgrfAaKEA~~KAlg~g~~~~~~~~dIeI~   79 (132)
                      .|||||..+.|..+ ....+ ..+.+++||+.|+++....++.   ...|.-.|+.|||++||+|+|+..  .++.+++.
T Consensus       135 ~VGVDIE~i~~~~~~~~~~~-~~l~~~~fs~~E~~~l~~~~~~~~~~~~F~~~WtlKEAyiKA~G~GL~~--~L~~~~f~  211 (323)
T 2c43_A          135 QVGIDIMKTSFPGRGSIPEF-FHIMKRKFTNKEWETIRSFKDEWTQLDMFYRNWALKESFIKAIGVGLGF--ELQRLEFD  211 (323)
T ss_dssp             EEEEEEEECCCCSSSCHHHH-HHHTGGGSCHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHHHHHTCCSCC--CGGGEEEE
T ss_pred             CCCCCEEEECCCCCCCHHHH-HHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC--CCCEEEEE
T ss_conf             85532277213345554679-9999972999999999857986788999999999999999760888688--97227998


Q ss_pred             ECCCC----C----EEEEECHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEE
Q ss_conf             88888----7----49999758999999614677712899998717976899999
Q gi|254780938|r   80 HFPGG----K----PYISISGRASDVLSSLVPKGYKPVVHLTISDDFPFAQAFVV  126 (132)
Q Consensus        80 ~~~~G----~----P~i~l~~~~~~~~~~~~~~~~~~~i~iSiSHd~~~A~A~vI  126 (132)
                      -++..    +    ..+.+.+.          ....+.++.. .-+.+|.+|+++
T Consensus       212 ~~~~~~~~~~~~~~~~l~~d~~----------~~~~W~f~~~-~l~~~h~vAVa~  255 (323)
T 2c43_A          212 LSPLNLDIGQVYKETRLFLDGE----------EEKEWAFEES-KIDEHHFVAVAL  255 (323)
T ss_dssp             CCSSCCCTTCCBCCCEEEETTE----------ECTTEEEEEE-EEETTEEEEEEE
T ss_pred             ECCCCCCCCCCCCCCEEEECCC----------CCCCEEEEEE-ECCCCEEEEEEE
T ss_conf             1676655343555516874588----------7886499998-169997999998


No 16 
>2c43_A Aminoadipate-semialdehyde dehydrogenase- phosphopantetheinyl transferase; fatty acid biosynthesis, phosphopantetheine transferase, coenzyme A; HET: COA; 1.93A {Homo sapiens} PDB: 2byd_A* 2cg5_A*
Probab=98.18  E-value=4.8e-07  Score=59.56  Aligned_cols=84  Identities=17%  Similarity=0.269  Sum_probs=63.2

Q ss_pred             HHHHHHCCHHHHHHHHCCC---CCCCCCCCEEEECCCEEEEECCCCCCCCCCCEEEEEECCCCCEEEEECHHHHHHHHHH
Q ss_conf             6898751978899984036---8742001112312112346406678987431079998888874999975899999961
Q gi|254780938|r   25 KFESRCFSSLEQDVCDLSC---NRVASYAKRFAAKEAFSKAIGTGISKGVSWKDIEVCHFPGGKPYISISGRASDVLSSL  101 (132)
Q Consensus        25 ~f~~ri~t~~E~~~~~~~~---~~~~~lAgrfAaKEA~~KAlg~g~~~~~~~~dIeI~~~~~G~P~i~l~~~~~~~~~~~  101 (132)
                      .++-++++++|++......   ++.++|+||...+.++.+.+|      +.|.+|.+.+++.|||++.-..         
T Consensus        44 ~~al~lL~~eE~~R~~rf~~~~Dr~~~L~gRlLlR~~L~~~lg------i~~~~i~~~~~~~GKP~L~~~~---------  108 (323)
T 2c43_A           44 LLAVRSIQPEEKERIGQFVFARDAKAAMAGRLMIRKLVAEKLN------IPWNHIRLQRTAKGKPVLAKDS---------  108 (323)
T ss_dssp             HHHHHTSCHHHHHHHHTCSBHHHHHHHHHHHHHHHHHHHHHSC------CCGGGCCEEECTTSCEEECCC----------
T ss_pred             HHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC------CCHHHEEEEECCCCCCEEECCC---------
T ss_conf             9999639999999998537899999999999999999999969------7879957863859881760887---------


Q ss_pred             CCCCCCEEEEEEEECCCCEEEEEE
Q ss_conf             467771289999871797689999
Q gi|254780938|r  102 VPKGYKPVVHLTISDDFPFAQAFV  125 (132)
Q Consensus       102 ~~~~~~~~i~iSiSHd~~~A~A~v  125 (132)
                      .  .....++.||||+++|++..+
T Consensus       109 ~--~~~~~l~FNISHsg~~vv~a~  130 (323)
T 2c43_A          109 S--NPYPNFNFNISHQGDYAVLAA  130 (323)
T ss_dssp             ---CCSSSCEEEEEEETTEEEEEE
T ss_pred             C--CCCCCCEEEEECCCCEEEEEE
T ss_conf             7--778875587606658089999


No 17 
>1qr0_A 4'-phosphopantetheinyl transferase SFP; protein-coenzyme A complex; HET: COA; 1.90A {Bacillus subtilis} SCOP: d.150.1.1 d.150.1.1
Probab=97.91  E-value=1.5e-06  Score=56.73  Aligned_cols=78  Identities=18%  Similarity=0.234  Sum_probs=59.2

Q ss_pred             HHHHHHHCCHHHHHHHHCCCC---CCCCCCCEEEECCCEEEEECCCCCCCCCCCEEEEEECCCCCEEEEECHHHHHHHHH
Q ss_conf             768987519788999840368---74200111231211234640667898743107999888887499997589999996
Q gi|254780938|r   24 RKFESRCFSSLEQDVCDLSCN---RVASYAKRFAAKEAFSKAIGTGISKGVSWKDIEVCHFPGGKPYISISGRASDVLSS  100 (132)
Q Consensus        24 ~~f~~ri~t~~E~~~~~~~~~---~~~~lAgrfAaKEA~~KAlg~g~~~~~~~~dIeI~~~~~G~P~i~l~~~~~~~~~~  100 (132)
                      ++++ .+++++|++.......   +.+++++|...+.++.+-+|      +.+.++++.++++|+|++.  +        
T Consensus        18 ~~~~-~~Ls~~e~~r~~~~~~~~dr~~~l~~r~llr~~l~~~~~------~~~~~i~~~~~~~GkP~l~--~--------   80 (228)
T 1qr0_A           18 ERFM-TFISPEKREKCRRFYHKEDAHRTLLGDVLVRSVISRQYQ------LDKSDIRFSTQEYGKPCIP--D--------   80 (228)
T ss_dssp             HHHH-TTSCHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHHTT------CCGGGCCCEECTTSCEECT--T--------
T ss_pred             HHHH-HHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC------CCHHHCEEECCCCCCCEEC--C--------
T ss_conf             9998-559999999998538999999999999999999999979------4879927852979898705--9--------


Q ss_pred             HCCCCCCEEEEEEEECCCCEEEEE
Q ss_conf             146777128999987179768999
Q gi|254780938|r  101 LVPKGYKPVVHLTISDDFPFAQAF  124 (132)
Q Consensus       101 ~~~~~~~~~i~iSiSHd~~~A~A~  124 (132)
                        .    ..+++||||+++++++.
T Consensus        81 --~----~~~~fsiSHs~~~v~~a   98 (228)
T 1qr0_A           81 --L----PDAHFNISHSGRWVIGA   98 (228)
T ss_dssp             --C----TTCEEEEEEETTEEEEE
T ss_pred             --C----CCCEEEECCCCCCEEEE
T ss_conf             --9----99869866768807999


Done!