HHsearch alignment for GI: 254780939 and conserved domain: COG0681

Probab=99.80  E-value=3.5e-19  Score=140.50  Aligned_cols=91  Identities=44%  Similarity=0.799  Sum_probs=80.6

Q ss_pred             HHHHHHHHHHHHHHHHH--HHEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf             87899999999999988--7516898998786677643369889998400587664122115422221125553347046
Q gi|254780939|r   14 SDTLKSILQALFFAILI--RTFLFQPSVIPSGSMIPTLLVGDYIIVNKFSYGYSKYSFPFSYNLFNGRIFNNQPRRGDVV   91 (248)
Q Consensus        14 ~e~i~~l~~~i~i~~~i--r~fv~~~f~Ips~SM~PTL~~GD~i~VnK~~YG~~~~~~p~~~~~~~~~i~~~~p~RGDIV   91 (248)
T Consensus         8 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~V~s~SM~Ptl~~GD~v~v~k~~~~~~------------------~~~~~~~~   69 (166)
T COG0681           8 LELISSLLIAIILALIIGVRTFVFEPVVVPSGSMEPTLNVGDRVLVKKFSYGFG------------------KLKVPDII   69 (166)
T ss_pred             HHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCCCCCCCCCCEEEEECCCCCCC------------------CCCCCCEE
T ss_conf             999999999999999753204346889980898745677788999966556766------------------45654200


Q ss_pred             EEECCCCCHHHEEEEEEEECHHHEEECCCCEEE
Q ss_conf             640144200310000003042343200773245
Q gi|254780939|r   92 VFRYPKDPSIDYVKRVIGLPGDRISLEKGIIYI  124 (248)
Q Consensus        92 VF~~P~d~~~~yVKRvIGlPGDtV~i~~~~l~I  124 (248)
T Consensus        70 --~~~~~~~~~~~kr~~~~~GD~i~~~~~~~~~  100 (166)
T COG0681          70 --VLPAVVEGDLIKRVIGLRGDIVVFKDDRLYV  100 (166)
T ss_pred             --CCCCCCCCCCCCCCCCCCCCEEEECCCCCCC
T ss_conf             --1442233404032467998889976876310