HHsearch alignment for GI: 254780939 and conserved domain: COG2932
>COG2932 Predicted transcriptional regulator [Transcription].
Probab=98.04 E-value=9e-06 Score=56.14 Aligned_cols=57 Identities=33% Similarity=0.442 Sum_probs=42.8
Q ss_pred EEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHEEEEEEEECHHHEE
Q ss_conf 89987866776433698899984005876641221154222211255533470466401442003100000030423432
Q gi|254780939|r 37 PSVIPSGSMIPTLLVGDYIIVNKFSYGYSKYSFPFSYNLFNGRIFNNQPRRGDVVVFRYPKDPSIDYVKRVIGLPGDRIS 116 (248)
Q Consensus 37 ~f~Ips~SM~PTL~~GD~i~VnK~~YG~~~~~~p~~~~~~~~~i~~~~p~RGDIVVF~~P~d~~~~yVKRvIGlPGDtV~ 116 (248)
T Consensus 125 ~i~V~GDSMeP~~~~Gd~ilVd~----------------------~~~~~~gd~v~v~~--~g~~~~VK~l~~~~~~~~~ 180 (214)
T COG2932 125 ALRVTGDSMEPTYEDGDTLLVDP----------------------GVNTRRGDRVYVET--DGGELYVKKLQREPGGLLR 180 (214)
T ss_pred EEEEECCCCCCCCCCCCEEEEEC----------------------CCCEEECCEEEEEE--ECCEEEEEEEEEECCCEEE
T ss_conf 99996776663015999999978----------------------98425199999999--5994889999995798799
Q ss_pred E
Q ss_conf 0
Q gi|254780939|r 117 L 117 (248)
Q Consensus 117 i 117 (248)
T Consensus 181 l 181 (214)
T COG2932 181 L 181 (214)
T ss_pred E
T ss_conf 9