HHsearch alignment for GI: 254780939 and conserved domain: PRK10276
>PRK10276 DNA polymerase V subunit UmuD; Provisional.
Probab=96.24 E-value=0.0088 Score=37.34 Aligned_cols=45 Identities=27% Similarity=0.298 Sum_probs=36.3
Q ss_pred EEECCCCC-CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHEEEEE
Q ss_conf 99878667-76433698899984005876641221154222211255533470466401442003100000
Q gi|254780939|r 38 SVIPSGSM-IPTLLVGDYIIVNKFSYGYSKYSFPFSYNLFNGRIFNNQPRRGDVVVFRYPKDPSIDYVKRV 107 (248)
Q Consensus 38 f~Ips~SM-~PTL~~GD~i~VnK~~YG~~~~~~p~~~~~~~~~i~~~~p~RGDIVVF~~P~d~~~~yVKRv 107 (248)
T Consensus 54 lrV~GdSMi~agI~dGDiliVdr~----------------------~~~~~GdIVva~i--d-ge~tvKrl 99 (139)
T PRK10276 54 VKASGDSMIDAGISDGDLLIVDSS----------------------ITASHGDIVIAAV--D-GEFTVKKL 99 (139)
T ss_pred EEEECCCCCCCCCCCCCEEEEEEC----------------------CCCCCCCEEEEEE--C-CEEEEEEE
T ss_conf 997268734488899899999405----------------------9877899999998--9-98899999