HHsearch results for GI: 254780939 and protein with PDBid: 1b12_A
>1b12_A Signal peptidase I; serine proteinase, serine-dependant hydrolase, signal peptide processing, protein translocation; HET: 1PN; 1.95A {Escherichia coli BL21} SCOP: b.87.1.2 PDB: 1t7d_A* 3iiq_A* 1kn9_A*
Probab=100.00 E-value=0 Score=387.68 Aligned_cols=204 Identities=39% Similarity=0.723 Sum_probs=148.1
Q ss_pred HHHEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHEEEEEEE
Q ss_conf 87516898998786677643369889998400587664122115422221125553347046640144200310000003
Q gi|254780939|r 30 IRTFLFQPSVIPSGSMIPTLLVGDYIIVNKFSYGYSKYSFPFSYNLFNGRIFNNQPRRGDVVVFRYPKDPSIDYVKRVIG 109 (248)
Q Consensus 30 ir~fv~~~f~Ips~SM~PTL~~GD~i~VnK~~YG~~~~~~p~~~~~~~~~i~~~~p~RGDIVVF~~P~d~~~~yVKRvIG 109 (248)
||+|++|+|+|||+||+|||+.||+|||||++||+|.|..... .+....|+|||||||++|.+++..|||||||
T Consensus 1 Ir~fv~~~f~IPs~SMePTL~~GD~l~V~K~~Yg~r~P~~~~~------i~~~~~~~~gdivvf~~p~~~~~~~vKR~ig 74 (248)
T 1b12_A 1 VRSFIYEPFQIPSGSMMPTLLIGDFILVEKFAYGIKDPIYQKT------LIETGHPKRGDIVVFKYPEDPKLDYIKRAVG 74 (248)
T ss_dssp -CBCCEEEEECCSCTTTTTSCTTEEEEEEESEEEEECGGGSCE------EEEECCCCTTCEEEEECTTCTTSEEEEEEEE
T ss_pred CEEEEEEEEEECCCCCHHHHCCCCEEEEEECCCCCCCCCCCCE------EEECCCCCCCCEEEECCCCCCCCCEEECCCC
T ss_conf 9499999689286036203206999999934258677875866------4004898528999986788888652223567
Q ss_pred ECHHHEEECCC--CEEECCCCCCCCCCCCCEEEC-----------------CCC---------------CCEEEEEECCC
Q ss_conf 04234320077--324535312245446400221-----------------478---------------62012210221
Q gi|254780939|r 110 LPGDRISLEKG--IIYINGAPVVRHMEGYFSYHY-----------------KED---------------WSSNVPIFQEK 155 (248)
Q Consensus 110 lPGDtV~i~~~--~l~INg~~i~~~~~~~~~~~~-----------------~~~---------------~~~~~~~~~e~ 155 (248)
+|||+|++++. .+++|+............... ... .........|+
T Consensus 75 ~pGD~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (248)
T 1b12_A 75 LPGDKVTYDPVSKELTIQPGCSSGQACENALPVTYSNVEPSDFVQTFSRRNGGEATSGFFEVPKNETKENGIRLSERKET 154 (248)
T ss_dssp CTTCEEEEETTTTEEEEETTCCSSCCCCCCCCEEECCCEEEEEEEEEECGGGSCEEEEEEECCTTCCCTTEEEEEEEEEE
T ss_pred CCCCEEEEECCCCEEEECCCCCCCEEEECCEEEECCCCCCCHHHHEECCCCCCCCCCCEEECCCCCCCCCCEEEEEEEEC
T ss_conf 89877787446531786225556636523255202434741211000002676124530431455435575683023321
Q ss_pred CCCCCCCCEE---------ECCCCCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCCCCCCCHHHEEEEEEEEEEECCCC
Q ss_conf 4678500022---------1245578874530232446499971788777644536530260888253389999743788
Q gi|254780939|r 156 LSNGVLYNVL---------SQDFLAPSSNISEFLVPKGHYFMMGDNRDKSKDSRWVEVGFVPEENLVGRASFVLFSIGGD 226 (248)
Q Consensus 156 l~~~~~~~~~---------~~~~~~~~~~~~~~~VP~g~yfvlGDNRdnS~DSR~~~~G~Vp~~~IvGka~~i~~S~d~~ 226 (248)
+++ ..+..+ ......+.++.++++||+||||||||||+||+|||| ||+||+++|+|||+++|||+|..
T Consensus 155 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Vp~~~yfvmGDNR~nS~DSR~--~G~Vp~~~I~Gka~~i~~p~~~~ 231 (248)
T 1b12_A 155 LGD-VTHRILTVPIAQDQVGMYYQQPGQQLATWIVPPGQYFMMGDNRDNSADSRY--WGFVPEANLVGRATAIWMSFDKQ 231 (248)
T ss_dssp ETT-EEEEEEECTTCCCCGGGSCCCTTCCTTEEECCTTEEEEECSBTTSCCCHHH--HCCEEGGGEEEEEEEEEEEBC--
T ss_pred CCC-CEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCCCCCC--CCCCCHHHEEEEEEEEEEECCCC
T ss_conf 587-202566414420011100037765452089628849997179886640155--57776899588889999988887
Q ss_pred CCCCCCCCCCCCCCHHHCCCC
Q ss_conf 775435554567013342232
Q gi|254780939|r 227 TPFSKVWLWIPNMRWDRLFKI 247 (248)
Q Consensus 227 ~~~~~~~~~~~~iRw~R~f~~ 247 (248)
.. .|+.++||+||++.
T Consensus 232 ~~-----~~~~~~R~~Rig~i 247 (248)
T 1b12_A 232 EG-----EWPTGLRLSRIGGI 247 (248)
T ss_dssp -----------CBCGGGCBCC
T ss_pred CC-----CCCCCCCCCCCCCC
T ss_conf 68-----68777663016127