HHsearch results for GI: 254780939 and protein with PDBid: 1kca_A

>1kca_A Repressor protein CI; gene regulation, DNA-binding, lambda repressor, protein oligomerization, DNA-looping; 2.91A {Enterobacteria phage lambda} SCOP: b.87.1.1
Probab=96.95  E-value=0.0017  Score=40.51  Aligned_cols=48  Identities=23%  Similarity=0.283  Sum_probs=36.8

Q ss_pred             EEECCCCC------CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHEEEEEEE
Q ss_conf             99878667------7643369889998400587664122115422221125553347046640144200310000003
Q gi|254780939|r   38 SVIPSGSM------IPTLLVGDYIIVNKFSYGYSKYSFPFSYNLFNGRIFNNQPRRGDVVVFRYPKDPSIDYVKRVIG  109 (248)
Q Consensus        38 f~Ips~SM------~PTL~~GD~i~VnK~~YG~~~~~~p~~~~~~~~~i~~~~p~RGDIVVF~~P~d~~~~yVKRvIG  109 (248)
                      .+|.++||      +|++..||.|+|++                      ..+|+-||+|+..-..  ....+||+.-
T Consensus        16 l~V~GdSM~~~~g~ep~i~~GdiviVd~----------------------~~~~~~G~ivva~~~~--~~~~~Krl~~   69 (109)
T 1kca_A           16 LEVEGNSMTAPTGSKPSFPDGMLILVDP----------------------EQAVEPGDFCIARLGG--DEFTFKKLIR   69 (109)
T ss_dssp             EECCSSTTCCCTTCSSCCCTTCEEEEET----------------------TSCCCTTCEEEEECST--TCEEEEEEEE
T ss_pred             EEEECCCCCCCCCCCCCCCCCCEEEEEC----------------------CCCCCCCCEEEEEECC--CEEEEEEEEE
T ss_conf             9997866788866789639999999982----------------------5866789999999969--9999999999