HHSEARCH alignment of GI: 254780939 and SCOP domain: d1jhfa2

Alignment

Probab=97.34  E-value=0.00015  Score=45.60  Aligned_cols=49  Identities=33%  Similarity=0.334  Sum_probs=39.5

Q ss_pred             EEEECCCCCCCC-CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHEEEEEEEE
Q ss_conf             899878667764-33698899984005876641221154222211255533470466401442003100000030
Q gi|254780939|r   37 PSVIPSGSMIPT-LLVGDYIIVNKFSYGYSKYSFPFSYNLFNGRIFNNQPRRGDVVVFRYPKDPSIDYVKRVIGL  110 (248)
Q Consensus        37 ~f~Ips~SM~PT-L~~GD~i~VnK~~YG~~~~~~p~~~~~~~~~i~~~~p~RGDIVVF~~P~d~~~~yVKRvIGl  110 (248)
                      ..+|.++||+|+ +..||.|+|.+-                      .+++-|||||+..  + +..+|||+.=.
T Consensus        40 ~lrV~GdSM~~~~i~~gd~viv~~~----------------------~~~~~G~ivv~~~--~-ge~~vKrl~~~   89 (126)
T d1jhfa2          40 LLRVSGMSMKDIGIMDGDLLAVHKT----------------------QDVRNGQVVVARI--D-DEVTVKRLKKQ   89 (126)
T ss_dssp             EEECCSSTTGGGTCCTTCEEEEEEC----------------------SCCCTTSEEEEEE--T-TEEEEEEEEEE
T ss_pred             EEEECCCCCCCCCCCCCEEEEEECC----------------------CCCCCCCEEEEEE--C-CEEEEEEEEEC
T ss_conf             9999487666741479979997136----------------------4033998999999--9-99999999982

SCOP domain information

class: All beta proteins
fold: LexA/Signal peptidase
superfamily: LexA/Signal peptidase
family: LexA-related
domain: LexA C-terminal domain
species: Escherichia coli [TaxId: 562]