HHsearch alignment for GI: 254780940 and conserved domain: cd00048

>cd00048 DSRM Double-stranded RNA binding motif. Binding is not sequence specific but is highly specific for double stranded RNA. Found in a variety of proteins including dsRNA dependent protein kinase PKR, RNA helicases, Drosophila staufen protein, E. coli RNase III, RNases H1, and dsRNA dependent adenosine deaminases.
Probab=99.64  E-value=5.2e-16  Score=118.51  Aligned_cols=68  Identities=40%  Similarity=0.581  Sum_probs=65.7

Q ss_pred             CHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCEEEEEEEECCEEEEEEEECCHHHHHHHHHHHHHHHC
Q ss_conf             52588987532022333343101020778884599999999989999996898999999999999974
Q gi|254780940|r  156 DAKTELQEWAHAKFGVTPEYKVTFRSGPDHDPRFTVVVEISGLAPAQGMDCSKRAAEQVAAAEVLKRE  223 (227)
Q Consensus       156 dpK~~Lqe~~q~~~~~~P~Y~~~~~~g~~~~~~f~v~v~v~g~~~g~g~g~SkK~Ae~~AA~~AL~kl  223 (227)
T Consensus         1 ~pks~LqE~~q~~~~~~p~Y~~~~~~g~~h~~~F~~~v~i~~~~~~~g~g~sKK~Aeq~AA~~aL~~L   68 (68)
T cd00048           1 NPKSLLQELAQKRGKPLPEYELVEEEGPDHAPRFTVEVTVGGKITGEGEGSSKKEAKQNAAEAALRKL   68 (68)
T ss_pred             CCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCEEEEEEEECCEEEECCCCCCHHHHHHHHHHHHHHHC
T ss_conf             95789999999749999979616540898773499999999988615777769999999999999849