HHsearch results for GI: 254780940 and protein with PDBid: 1ekz_A

>1ekz_A DSRBDIII, maternal effect protein (staufen); structure, protein/RNA, protein DSRBD, RNA hairpin; NMR {Drosophila melanogaster} SCOP: d.50.1.1 PDB: 1stu_A

Probab=99.51  E-value=3.8e-15  Score=111.86  Aligned_cols=71  Identities=17%  Similarity=0.246  Sum_probs=65.1

Q ss_pred             CCCCCHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCEEEEEEEECCEEEEEEEECCHHHHHHHHHHHHHHHCC
Q ss_conf             0134525889875320223333431010207788845999999999899999968989999999999999748
Q gi|254780940|r  152 KFRRDAKTELQEWAHAKFGVTPEYKVTFRSGPDHDPRFTVVVEISGLAPAQGMDCSKRAAEQVAAAEVLKREG  224 (227)
Q Consensus       152 ~~~~dpK~~Lqe~~q~~~~~~P~Y~~~~~~g~~~~~~f~v~v~v~g~~~g~g~g~SkK~Ae~~AA~~AL~klg  224 (227)
                      ...+||++.||||||+++.. |.|.++.++||+|++.|+|.|.+++. .++|.|+|||+||+.||+.||++|.
T Consensus         4 ~~~k~pvs~L~E~~qk~~~~-~~y~~v~~~G~~h~~~F~~~v~~~~~-~~~g~g~sKK~A~~~AA~~al~~L~   74 (76)
T 1ekz_A            4 GDKKSPISQVHEIGIKRNMT-VHFKVLREEGPAHMKNFITACIVGSI-VTEGEGNGKKVSKKRAAEKMLVELQ   74 (76)
T ss_dssp             CCCSCHHHHHHHHHHHTTCC-CEEEESSSCCSSSCSCSSEEEEETTE-EEEECCCSTTSSSHHHHHHHHHHHT
T ss_pred             CCCCCHHHHHHHHHHHCCCC-CEEEEEEEECCCCCCEEEEEEEECCE-EEECCCCHHHHHHHHHHHHHHHHHH
T ss_conf             77889779999999967989-73899863179888379999998989-7524646199999999999999997