HHsearch results for GI: 254780940 and protein with PDBid: 1x48_A

>1x48_A Interferon-induced, double-stranded RNA- activated protein kinase; structure genomics, DSRM domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.50.1.1

Probab=99.56  E-value=7.8e-15  Score=109.92  Aligned_cols=67  Identities=19%  Similarity=0.210  Sum_probs=61.3

Q ss_pred             CCHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCEEEEEEEECCEEEEEEEECCHHHHHHHHHHHHHHHC
Q ss_conf             452588987532022333343101020778884599999999989999996898999999999999974
Q gi|254780940|r  155 RDAKTELQEWAHAKFGVTPEYKVTFRSGPDHDPRFTVVVEISGLAPAQGMDCSKRAAEQVAAAEVLKRE  223 (227)
Q Consensus       155 ~dpK~~Lqe~~q~~~~~~P~Y~~~~~~g~~~~~~f~v~v~v~g~~~g~g~g~SkK~Ae~~AA~~AL~kl  223 (227)
                      .|||++||||||++... +.|.++ ++||+|++.|+|.|.|+|..+++|.|+|||+||+.||+.||++|
T Consensus         6 ~~Y~s~L~E~~Qk~~~~-~~~~~~-e~g~~h~~~F~~~v~i~~~~~~~g~G~sKK~Aeq~AA~~Al~~L   72 (88)
T 1x48_A            6 SGYIGLVNSFAQKKKLS-VNYEQC-EPNSELPQRFICKCKIGQTMYGTGSGVTKQEAKQLAAKEAYQKL   72 (88)
T ss_dssp             SCHHHHHHHHHHHTTCC-EEEEEC-CCSSSSSCCEEEEEEESSCEEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHCCC-CCEEEE-EECCCCCCCEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHH
T ss_conf             66999999999986899-883886-11799997489999994489712688757899999999999999