HHsearch results for GI: 254780940 and protein with PDBid: 2a11_A
>2a11_A Ribonuclease III, RNAse III; nuclease domain, structural genomics, PSI, protein structure initiative; 2.10A {Mycobacterium tuberculosis}
Probab=100.00 E-value=0 Score=395.05 Aligned_cols=220 Identities=33% Similarity=0.385 Sum_probs=200.7
Q ss_pred CHHHHHHHHCCCCCCHHHHHHHCCCHHHCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Q ss_conf 8899999836965898999984246121266--76654778874586886454787764104688789988888887443
Q gi|254780940|r 5 RYSTLEKRIGYAFANRSLLEKALTHSSISHS--YQESYERLEFLGDRILGLLISTLLFNHFDSAKEGELSVRFNSLVSAE 82 (227)
Q Consensus 5 ~~~~l~~~lgy~f~~~~ll~~A~th~S~~~~--~~~~~erLEflGDavL~~~v~~~l~~~~p~~~eG~lt~lr~~lV~n~ 82 (227)
...+|+++|||.|+| +||.+||||+||.++ ...|||||||||||||+++|++|||.+||+++||.||.+|+.+|||+
T Consensus 6 ~~~~l~~~lg~~~~~-~Ll~~AlTH~S~~~~~~~~~~~ErLEfLGDavL~~~v~~~l~~~~p~~~~g~lt~lr~~lv~~~ 84 (242)
T 2a11_A 6 SRQPLLDALGVDLPD-ELLSLALTHRSYAYENGGLPTNERLEFLGDAVLGLTITDALFHRHPDRSEGDLAKLRASVVNTQ 84 (242)
T ss_dssp CCHHHHHHHTSCCCH-HHHHHHTBCHHHHHHTTSCCCTHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHSHH
T ss_pred HHHHHHHHHCCCCCH-HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
T ss_conf 499999996898798-9999854787853458998760788757899999999999998789998347599999982378
Q ss_pred HHHHHHHHCCCCC---EEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCC--CCCCCCH
Q ss_conf 3454543138772---0010366312375313333326699999999641554220012210256431110--0013452
Q gi|254780940|r 83 TCSQVARELDLAS---FIRVSSDLRKDVCSFMTSIQADVVESLIAALYLDGGIEVAGTFVDKYWKQRALKS--GKFRRDA 157 (227)
Q Consensus 83 ~La~~a~~lgl~~---~l~~~~~~~~~~~~~~~~ilad~fEA~iGAiy~d~G~~~~~~~i~~~~~~~~~~~--~~~~~dp 157 (227)
+|+.+|.++|+++ |+++++++.....+.++++++|+|||+|||||+|+|++.++.|+.++|.+.+... .....||
T Consensus 85 ~La~~A~~lgl~~~~~~~~~~~~~~~~~~~~~~kilaD~fEAliGAiylD~g~~~~~~~v~~l~~~~l~~~~~~~~~~d~ 164 (242)
T 2a11_A 85 ALADVARRLCAEGLGVHVLLGRGEANTGGADKSSILADGMESLLGAIYLQHGMEKAREVILRLFGPLLDAAPTLGAGLDW 164 (242)
T ss_dssp HHHHHHHHHSSSCSGGGCBCCHHHHHTTGGGCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHTHHHHHHTTC-------
T ss_pred HHHHHHHHHCCCCCCCEEEECCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99999998385545515660462121488663028999999998896202205889999999999999754420234782
Q ss_pred HHHHHHHHHCCCCCCCCCCEECCCCCCCCCEEEEEEEECCEEEEEEEECCHHHHHHHHHHHHHHHCCCC
Q ss_conf 588987532022333343101020778884599999999989999996898999999999999974889
Q gi|254780940|r 158 KTELQEWAHAKFGVTPEYKVTFRSGPDHDPRFTVVVEISGLAPAQGMDCSKRAAEQVAAAEVLKREGIW 226 (227)
Q Consensus 158 K~~Lqe~~q~~~~~~P~Y~~~~~~g~~~~~~f~v~v~v~g~~~g~g~g~SkK~Ae~~AA~~AL~klgi~ 226 (227)
|+.||||||+.+...|.|. +.++||+|++.|+|+|+++|+.+|+|+|+|||+|||+||+.||++|.++
T Consensus 165 K~~L~e~~q~~~~~~p~Y~-~~~~g~~~~~~F~v~v~i~~~~~g~G~g~skK~AEq~Aa~~alk~L~~l 232 (242)
T 2a11_A 165 KTSLQELTAARGLGAPSYL-VTSTGPDHDKEFTAVVVVMDSEYGSGVGRSKKEAEQKAAAAAWKALEVL 232 (242)
T ss_dssp ---------------------------------------------------------------------
T ss_pred HHHHHHHHHHHCCCCCEEE-EEEECCCCCCCEEEEEEECCEEEEEEEECCHHHHHHCCCHHHHHHHHHH
T ss_conf 0399999886078997699-9866699998289999999969999985889999728017799999864