HHsearch results for GI: 254780940 and protein with PDBid: 2dmy_A
>2dmy_A Spermatid perinuclear RNA-binding protein; DSRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.50.1.1
Probab=99.40 E-value=1.5e-12 Score=95.88 Aligned_cols=68 Identities=29% Similarity=0.340 Sum_probs=60.5
Q ss_pred CCCCHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCEEEEEEEECCEEEEEEEECCHHHHHHHHHHHHHHHCCCC
Q ss_conf 13452588987532022333343101020778884599999999989999996898999999999999974889
Q gi|254780940|r 153 FRRDAKTELQEWAHAKFGVTPEYKVTFRSGPDHDPRFTVVVEISGLAPAQGMDCSKRAAEQVAAAEVLKREGIW 226 (227)
Q Consensus 153 ~~~dpK~~Lqe~~q~~~~~~P~Y~~~~~~g~~~~~~f~v~v~v~g~~~g~g~g~SkK~Ae~~AA~~AL~klgi~ 226 (227)
...||+.+|+|+ ...|+|+++.++||+|++.|+|.|.++|..+ +|.|+|||+||++||+.||++|+.-
T Consensus 17 ~~~np~~~L~el-----~~~~~Y~~~~~~G~~h~~~F~~~v~v~~~~~-~g~G~SKK~Aeq~AA~~aL~~L~~~ 84 (97)
T 2dmy_A 17 DLMNALMRLNQI-----RPGLQYKLLSQSGPVHAPVFTMSVDVDGTTY-EASGPSKKTAKLHVAVKVLQAMGYP 84 (97)
T ss_dssp SCTHHHHHHHHH-----SCSCCCEEEEEESCSSSCEEEEEEEETTEEE-EEEESSHHHHHHHHHHHHHHHHTCC
T ss_pred CCCCHHHHHHHC-----CCCCEEEEEEEECCCCCCEEEEEEEECCEEE-ECCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf 734999999853-----7898799977278998961999999999998-6278979999999999999994899