HHsearch results for GI: 254780940 and protein with PDBid: 2kou_A
>2kou_A Dicer-like protein 4; ATP-binding, endonuclease, helicase, hydrolase, nuclease, nucleotide-binding, nucleus, RNA- binding; NMR {Arabidopsis thaliana}
Probab=90.94 E-value=0.59 Score=24.51 Aligned_cols=69 Identities=12% Similarity=0.082 Sum_probs=45.0
Q ss_pred CCHHHHHHHHHHCCCC-----CCCCCCEECCCCCCCCCEEEEEEEECC-----EEEEEEEECCHHHHHHHHHHHH---HH
Q ss_conf 4525889875320223-----333431010207788845999999999-----8999999689899999999999---99
Q gi|254780940|r 155 RDAKTELQEWAHAKFG-----VTPEYKVTFRSGPDHDPRFTVVVEISG-----LAPAQGMDCSKRAAEQVAAAEV---LK 221 (227)
Q Consensus 155 ~dpK~~Lqe~~q~~~~-----~~P~Y~~~~~~g~~~~~~f~v~v~v~g-----~~~g~g~g~SkK~Ae~~AA~~A---L~ 221 (227)
.+..+.|+.||++--. ..|.|.+...+. .+.|.|.|.+.- ...|. .-.||+.|++.||-+| |.
T Consensus 4 ~sAv~ll~~yCs~Lp~d~f~~~~P~~~~~~~~~---~~~~~c~v~LP~~splr~i~g~-~~~sk~~AK~sAAf~Ac~~L~ 79 (102)
T 2kou_A 4 GSSISMMYKYCSRLPHDEFFQPKPEFQFKPVDE---FGGTICRITLPANAPISEIESS-LLPSTEAAKKDACLKAVHELH 79 (102)
T ss_dssp SHHHHHHHHHHTTSSSCTTCCSSCEEEEEECCG---GGCEEEEEECCTTCSSCCEEEE-EESSHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHCCCCCCCCCCCCEEEEEEECC---CCCEEEEEECCCCCCCCEEECC-CCCCHHHHHHHHHHHHHHHHH
T ss_conf 039999999970489875566785499998568---8828999987899975768756-430089999999999999999
Q ss_pred HCCCCC
Q ss_conf 748899
Q gi|254780940|r 222 REGIWT 227 (227)
Q Consensus 222 klgi~t 227 (227)
++|.++
T Consensus 80 ~~G~Ld 85 (102)
T 2kou_A 80 NLGVLN 85 (102)
T ss_dssp HHCSCT
T ss_pred HCCCCC
T ss_conf 859987