HHSEARCH alignment of GI: 254780940 and SCOP domain: d1di2a_

Alignment

Probab=99.63  E-value=3.7e-16  Score=116.61  Aligned_cols=67  Identities=34%  Similarity=0.439  Sum_probs=63.9

Q ss_pred             HHHHHHHHHHCCCCCCCCCCEECCCCCCCCCEEEEEEEECCEEEEEEEECCHHHHHHHHHHHHHHHCC
Q ss_conf             25889875320223333431010207788845999999999899999968989999999999999748
Q gi|254780940|r  157 AKTELQEWAHAKFGVTPEYKVTFRSGPDHDPRFTVVVEISGLAPAQGMDCSKRAAEQVAAAEVLKREG  224 (227)
Q Consensus       157 pK~~Lqe~~q~~~~~~P~Y~~~~~~g~~~~~~f~v~v~v~g~~~g~g~g~SkK~Ae~~AA~~AL~klg  224 (227)
                      |++.|||+||+++..+|.|+++.++||+|++.|.|.|.+++.. ++|.|+|||+||+.||+.||++|.
T Consensus         2 Pv~~LqE~~q~~~~~~P~Y~~~~~~G~~h~~~F~~~v~v~~~~-~~g~g~sKK~Aeq~AA~~aL~~L~   68 (69)
T d1di2a_           2 PVGSLQELAVQKGWRLPEYTVAQESGPPHKREFTITCRVETFV-ETGSGTSKQVAKRVAAEKLLTKFK   68 (69)
T ss_dssp             HHHHHHHHHHHHTCCCCEEEEEEEESCGGGCEEEEEEEETTEE-EEEEESSHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCEEEEEEEEEEE-EECCCCCHHHHHHHHHHHHHHHHC
T ss_conf             8389999999759999838999843787774168999986678-763767299999999999999845

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: dsRBD-like
superfamily: dsRNA-binding domain-like
family: Double-stranded RNA-binding domain (dsRBD)
domain: Double-stranded RNA-binding protein A, second dsRBD
species: Xenopus laevis [TaxId: 8355]