HHSEARCH alignment of GI: 254780940 and SCOP domain: d1ekza_

Alignment

Probab=99.54  E-value=1.1e-15  Score=113.65  Aligned_cols=71  Identities=17%  Similarity=0.246  Sum_probs=65.2

Q ss_pred             CCCCCHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCEEEEEEEECCEEEEEEEECCHHHHHHHHHHHHHHHCC
Q ss_conf             0134525889875320223333431010207788845999999999899999968989999999999999748
Q gi|254780940|r  152 KFRRDAKTELQEWAHAKFGVTPEYKVTFRSGPDHDPRFTVVVEISGLAPAQGMDCSKRAAEQVAAAEVLKREG  224 (227)
Q Consensus       152 ~~~~dpK~~Lqe~~q~~~~~~P~Y~~~~~~g~~~~~~f~v~v~v~g~~~g~g~g~SkK~Ae~~AA~~AL~klg  224 (227)
                      ...+||++.||||||+++.. |.|.++..+||+|++.|+|.|.+++. .++|.|+|||+||+.||+.||++|.
T Consensus         4 ~~~k~Pvs~L~E~~q~~~~~-~~y~~~~~~G~~h~~~F~~~v~v~~~-~~~g~G~SKK~Aeq~AA~~al~~L~   74 (76)
T d1ekza_           4 GDKKSPISQVHEIGIKRNMT-VHFKVLREEGPAHMKNFITACIVGSI-VTEGEGNGKKVSKKRAAEKMLVELQ   74 (76)
T ss_dssp             CCCSCHHHHHHHHHHHTTCC-CEEEESSSCCSSSCSCSSEEEEETTE-EEEECCCSTTSSSHHHHHHHHHHHT
T ss_pred             CCCCCHHHHHHHHHHHCCCC-CEEEEEEEECCCCCEEEEEEEEEEEE-EEEECCCCHHHHHHHHHHHHHHHHH
T ss_conf             77889899999999967989-70899971379887089999998214-7660567699999999999999987

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: dsRBD-like
superfamily: dsRNA-binding domain-like
family: Double-stranded RNA-binding domain (dsRBD)
domain: Staufen, domain III
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]