HHSEARCH alignment of GI: 254780940 and SCOP domain: d1t4oa_

Alignment

Probab=99.56  E-value=1.4e-15  Score=113.02  Aligned_cols=74  Identities=16%  Similarity=0.117  Sum_probs=62.5

Q ss_pred             CCCCCCHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCEEEEEEEE-CCEEEEEEEECCHHHHHHHHHHHHHHHCCCC
Q ss_conf             001345258898753202233334310102077888459999999-9989999996898999999999999974889
Q gi|254780940|r  151 GKFRRDAKTELQEWAHAKFGVTPEYKVTFRSGPDHDPRFTVVVEI-SGLAPAQGMDCSKRAAEQVAAAEVLKREGIW  226 (227)
Q Consensus       151 ~~~~~dpK~~Lqe~~q~~~~~~P~Y~~~~~~g~~~~~~f~v~v~v-~g~~~g~g~g~SkK~Ae~~AA~~AL~klgi~  226 (227)
                      +.++.|+|++||+|||+.+. .|.|+++...||+|.+ |.|.|.+ ++..++.|.|+|||.||++||+.||+++++|
T Consensus         2 ~~id~~~K~~L~e~~~~~g~-~P~Y~~~~~~~~~~~~-f~v~~~v~~~~~~~~g~g~SKK~AEq~AA~~aL~~~~~l   76 (81)
T d1t4oa_           2 DKLDMNAKRQLYSLIGYASL-RLHYVTVKKPTAVDPN-SIVECRVGDGTVLGTGVGRNIKIAGIRAAENALRDKKML   76 (81)
T ss_dssp             CCCCTTHHHHHHHHHCCGGG-CCEEEEEECCCSSCCC-EEEEEECTTCCEEEEEEESSHHHHHHHHHHHHHHCHHHH
T ss_pred             CCCCCCHHHHHHHHHHCCCC-CCEEEEECCCCCCCCC-EEEEEEEECCCEEEECCCCHHHHHHHHHHHHHHHHCCHH
T ss_conf             85556899999999830899-8579970147878898-899999966825876453301089999999999832288

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: dsRBD-like
superfamily: dsRNA-binding domain-like
family: Double-stranded RNA-binding domain (dsRBD)
domain: RNase III, C-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]