HHSEARCH alignment of GI: 254780940 and SCOP domain: d1u61a_

Alignment
>d1u61a_ a.149.1.1 (A:) Hypothetical protein BC0111 {Bacillus cereus [TaxId: 1396]}
Probab=99.89  E-value=2.1e-24  Score=167.39  Aligned_cols=107  Identities=21%  Similarity=0.163  Sum_probs=88.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC--------CCCCCCC
Q ss_conf             66547788745868864547877641046887899888888874433454543138772001036--------6312375
Q gi|254780940|r   37 QESYERLEFLGDRILGLLISTLLFNHFDSAKEGELSVRFNSLVSAETCSQVARELDLASFIRVSS--------DLRKDVC  108 (227)
Q Consensus        37 ~~~~erLEflGDavL~~~v~~~l~~~~p~~~eG~lt~lr~~lV~n~~La~~a~~lgl~~~l~~~~--------~~~~~~~  108 (227)
                      .-|...|||||||||+++|++|||.+|| .+||+||++|+.+||+++|+.++..+++++|+..+.        +......
T Consensus         5 ~~~~~~LefLGDAVl~l~v~~~L~~~~p-~~eg~Lt~~r~~lV~~~~la~~a~~l~l~~~l~~~e~~~~~~Grn~~~~~~   83 (127)
T d1u61a_           5 QLNSLALAYMGDAVYEQYIRYHLLQKGK-VRPNQLHRLGTSFVSAKAQAKVVYHLLETAFLTEEEEAVLRRGRNANSGTV   83 (127)
T ss_dssp             TSCHHHHHHHHHHHHHHHHHHHHHHHCC-SCGGGHHHHHHHHHSHHHHHHHHHHHHHTTCSCHHHHHHHHHHTCCCSSCC
T ss_pred             HCCHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf             4484778987899999999999997189-990179999999924999999999907677764033431016775547777


Q ss_pred             C----CCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCC
Q ss_conf             3----13333326699999999641554220012210256
Q gi|254780940|r  109 S----FMTSIQADVVESLIAALYLDGGIEVAGTFVDKYWK  144 (227)
Q Consensus       109 ~----~~~~ilad~fEA~iGAiy~d~G~~~~~~~i~~~~~  144 (227)
                      +    ...+++||+|||+|||+|+|+|++.++.|+.+.+.
T Consensus        84 ~k~~~~~~y~lad~fEAliGalYLd~~~e~~~~~i~~~~~  123 (127)
T d1u61a_          84 PKNTDVQTYRHSTAFEALIGYHHLLNNRERLDEIVYKAIA  123 (127)
T ss_dssp             CTTCCHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf             7666514777605999999999991888999999999998


SCOP domain information

class: All alpha proteins
fold: RNase III domain-like
superfamily: RNase III domain-like
family: RNase III catalytic domain-like
domain: Hypothetical protein BC0111
species: Bacillus cereus [TaxId: 1396]