HHSEARCH alignment of GI: 254780940 and SCOP domain: d1uhza_

Alignment
>d1uhza_ d.50.1.1 (A:) staufen homolog 2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.68  E-value=7.7e-17  Score=120.79  Aligned_cols=71  Identities=21%  Similarity=0.288  Sum_probs=67.6

Q ss_pred             CCCHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCEEEEEEEECCEEEEEEEECCHHHHHHHHHHHHHHHCCC
Q ss_conf             345258898753202233334310102077888459999999998999999689899999999999997488
Q gi|254780940|r  154 RRDAKTELQEWAHAKFGVTPEYKVTFRSGPDHDPRFTVVVEISGLAPAQGMDCSKRAAEQVAAAEVLKREGI  225 (227)
Q Consensus       154 ~~dpK~~Lqe~~q~~~~~~P~Y~~~~~~g~~~~~~f~v~v~v~g~~~g~g~g~SkK~Ae~~AA~~AL~klgi  225 (227)
                      ..||+++||||||++...+|+|+++.++||+|++.|+|.|.+++.. .+|.|+|||+||+.||+.||++||.
T Consensus         5 ~~~P~s~LqE~~Q~~~~~~P~Y~~~~~~g~~h~~~F~~~v~v~~~~-~~g~g~SKK~Ae~~AA~~aL~~l~~   75 (89)
T d1uhza_           5 SSGPISRLAQIQQARKEKEPDYILLSERGMPRRREFVMQVKVGNEV-ATGTGPNKKIAKKNAAEAMLLQLGY   75 (89)
T ss_dssp             SSCHHHHHHHHHHHTTSCCCEEEEEEEESCSTTCEEEEEEEETTEE-EEEEESSHHHHHHHHHHHHHHHHTS
T ss_pred             CCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEEEEEEEEEE-CCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf             8881999999999649999979850244567750699999996564-0232037899999999999999676


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: dsRBD-like
superfamily: dsRNA-binding domain-like
family: Double-stranded RNA-binding domain (dsRBD)
domain: staufen homolog 2
species: Mouse (Mus musculus) [TaxId: 10090]