HHSEARCH alignment of GI: 254780940 and SCOP domain: d1whna_

Alignment
>d1whna_ d.50.1.1 (A:) tRNA-dihydrouridine synthase 2-like, Dus2l (2310016k04Rik) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.62  E-value=5.9e-16  Score=115.35  Aligned_cols=83  Identities=25%  Similarity=0.207  Sum_probs=68.4

Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCEEEEEEEECCEEEEEEEE-CCHHHHHHHHHHHH
Q ss_conf             02564311100013452588987532022333343101020778884599999999989999996-89899999999999
Q gi|254780940|r  141 KYWKQRALKSGKFRRDAKTELQEWAHAKFGVTPEYKVTFRSGPDHDPRFTVVVEISGLAPAQGMD-CSKRAAEQVAAAEV  219 (227)
Q Consensus       141 ~~~~~~~~~~~~~~~dpK~~Lqe~~q~~~~~~P~Y~~~~~~g~~~~~~f~v~v~v~g~~~g~g~g-~SkK~Ae~~AA~~A  219 (227)
                      .++............|||+.||||||+++..+|.|.++.+   .|++.|++.|.|+|..++.+.| +|||+||+.||+.|
T Consensus        12 ~~~~~~~r~~~p~~~~pKs~LqE~~Qk~~~~~P~Y~~~~~---~~~~~F~~~V~v~g~~~~s~~g~~SKK~AEq~AA~~A   88 (128)
T d1whna_          12 KMAIRFDRRAYPPQITPKMCLLEWCRREKLPQPVYETVQR---TIDRMFCSVVTVAEQKYQSTLWDKSKKLAEQTAAIVC   88 (128)
T ss_dssp             EECCCCCGGGSCTTCCHHHHHHHHHHHTTCCCCCCCEEEC---SSSCCEEEEEEETTEEEEESSCBSSHHHHHHHHHHHH
T ss_pred             EEEHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEC---CCCCCCEEEEEECCEEEECCCCCCCHHHHHHHHHHHH
T ss_conf             4237555301788998789999999863999976887622---5577777999988847651677453899999999999


Q ss_pred             HHHCCCC
Q ss_conf             9974889
Q gi|254780940|r  220 LKREGIW  226 (227)
Q Consensus       220 L~klgi~  226 (227)
                      |++||+-
T Consensus        89 L~~Lg~~   95 (128)
T d1whna_          89 LRSQGLP   95 (128)
T ss_dssp             HHHHTCS
T ss_pred             HHHHCCC
T ss_conf             9983898


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: dsRBD-like
superfamily: dsRNA-binding domain-like
family: Double-stranded RNA-binding domain (dsRBD)
domain: tRNA-dihydrouridine synthase 2-like, Dus2l (2310016k04Rik)
species: Mouse (Mus musculus) [TaxId: 10090]