HHSEARCH alignment of GI: 254780940 and SCOP domain: d1x47a1

Alignment

Probab=99.61  E-value=1.2e-15  Score=113.46  Aligned_cols=71  Identities=24%  Similarity=0.290  Sum_probs=64.1

Q ss_pred             CCCCCCHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCEEEEEEEECCEEEEEEEECCHHHHHHHHHHHHHHHC
Q ss_conf             0013452588987532022333343101020778884599999999989999996898999999999999974
Q gi|254780940|r  151 GKFRRDAKTELQEWAHAKFGVTPEYKVTFRSGPDHDPRFTVVVEISGLAPAQGMDCSKRAAEQVAAAEVLKRE  223 (227)
Q Consensus       151 ~~~~~dpK~~Lqe~~q~~~~~~P~Y~~~~~~g~~~~~~f~v~v~v~g~~~g~g~g~SkK~Ae~~AA~~AL~kl  223 (227)
                      .+..+|||+.||||||+.+..+|.|.++..+|++  +.|.|.|.++|..+++|.|+|||.||+.||+.||++|
T Consensus         5 n~~~K~p~s~LqE~~Qk~~~~~p~Y~~~~~~g~~--~~F~~~v~i~g~~~~~g~G~sKK~Aeq~AA~~AL~~L   75 (85)
T d1x47a1           5 NPNGKSEVCILHEYMQRVLKVRPVYNFFECENPS--EPFGASVTIDGVTYGSGTASSKKLAKNKAARATLEIL   75 (85)
T ss_dssp             CTTCCCHHHHHHHHHHHHTCSCCEEEEEECSSSS--CCEEEEEEETTEEEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCC--CCEEEEEEECCEEEECCCCCHHHHHHHHHHHHHHHHH
T ss_conf             8899598899999999829999973787547898--8889999999999744784129999999999999999

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: dsRBD-like
superfamily: dsRNA-binding domain-like
family: Double-stranded RNA-binding domain (dsRBD)
domain: Dgcr8 protein
species: Human (Homo sapiens) [TaxId: 9606]