HHSEARCH alignment of GI: 254780940 and SCOP domain: d2dmya1

Alignment
>d2dmya1 d.50.1.1 (A:8-91) Spermatid perinuclear RNA-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.46  E-value=2e-13  Score=99.79  Aligned_cols=68  Identities=31%  Similarity=0.376  Sum_probs=60.3

Q ss_pred             CCCHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCEEEEEEEECCEEEEEEEECCHHHHHHHHHHHHHHHCCCCC
Q ss_conf             34525889875320223333431010207788845999999999899999968989999999999999748899
Q gi|254780940|r  154 RRDAKTELQEWAHAKFGVTPEYKVTFRSGPDHDPRFTVVVEISGLAPAQGMDCSKRAAEQVAAAEVLKREGIWT  227 (227)
Q Consensus       154 ~~dpK~~Lqe~~q~~~~~~P~Y~~~~~~g~~~~~~f~v~v~v~g~~~g~g~g~SkK~Ae~~AA~~AL~klgi~t  227 (227)
                      ..||+++|+|+.     ..|+|+++.++||+|++.|+|.|.++|..+ .|.|+|||+||+.||+.||++|++-|
T Consensus        11 ~~n~~~~L~e~~-----~~~~Y~~~~~~Gp~h~~~F~~~v~v~g~~~-~g~G~SKK~Aeq~AA~~aL~~L~~~~   78 (84)
T d2dmya1          11 LMNALMRLNQIR-----PGLQYKLLSQSGPVHAPVFTMSVDVDGTTY-EASGPSKKTAKLHVAVKVLQAMGYPT   78 (84)
T ss_dssp             CTHHHHHHHHHS-----CSCCCEEEEEESCSSSCEEEEEEEETTEEE-EEEESSHHHHHHHHHHHHHHHHTCCC
T ss_pred             CCCHHHHHHHHC-----CCCEEEEEEEECCCCCCEEEEEEEECCEEE-ECCCCCHHHHHHHHHHHHHHHHCCCC
T ss_conf             449999998707-----898699977068988975999999999999-85899989999999999999948899


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: dsRBD-like
superfamily: dsRNA-binding domain-like
family: Double-stranded RNA-binding domain (dsRBD)
domain: Spermatid perinuclear RNA-binding protein
species: Human (Homo sapiens) [TaxId: 9606]