RPSBLAST alignment of GI: 254780940 and SCOP domain: d1o0wa1

Alignment

 Score =  107 bits (268), Expect = 7e-25
 Identities = 46/145 (31%), Positives = 75/145 (51%), Gaps = 7/145 (4%)

Query: 9   LEKRIGYAFANRSLLEKALTHSSISHSYQ-------ESYERLEFLGDRILGLLISTLLFN 61
            +K  G  F N  LL +AL HSS ++          ES E+LEFLGD +L L +  +L+ 
Sbjct: 14  FQKETGINFKNEELLFRALCHSSYANEQNQAGRKDVESNEKLEFLGDAVLELFVCEILYK 73

Query: 62  HFDSAKEGELSVRFNSLVSAETCSQVARELDLASFIRVSSDLRKDVCSFMTSIQADVVES 121
            +  A+ G+L+   ++  S E  + V+R+++L  F+ +     K       SI AD  E+
Sbjct: 74  KYPEAEVGDLARVKSAAASEEVLAMVSRKMNLGKFLFLGKGEEKTGGRDRDSILADAFEA 133

Query: 122 LIAALYLDGGIEVAGTFVDKYWKQR 146
           L+AA+YLD G E      ++ ++  
Sbjct: 134 LLAAIYLDQGYEKIKELFEQEFEFY 158

SCOP domain information

class: All alpha proteins
fold: RNase III domain-like
superfamily: RNase III domain-like
family: RNase III catalytic domain-like
domain: RNase III endonuclease catalytic domain
species: Thermotoga maritima [TaxId: 2336]