HHsearch alignment for GI: 254780941 and conserved domain: CHL00071
>CHL00071 tufA elongation factor Tu.
Probab=99.66 E-value=1e-15 Score=121.53 Aligned_cols=158 Identities=18% Similarity=0.147 Sum_probs=107.3
Q ss_pred CEEEEEECCCCCCHHHHHHHHHCCCEEE----------E-----CCCCCCEEEEEEEEEEECCEEEEEEECCCCHHHCCC
Q ss_conf 2189983389986889999986892021----------0-----588886021278999739948999987984010123
Q gi|254780941|r 22 SGCVALVGATNAGKSTLVNRFVGAKVSI----------V-----THKVQTTRSIVRGIVSEKESQIVFLDTPGIFNAKDS 86 (311)
Q Consensus 22 sg~VaivG~pN~GKSTL~N~l~g~~vsi----------v-----S~k~~TTr~~i~gi~~~~~~qiifvDTPG~~~~~~~ 86 (311)
T Consensus 12 ~vni~~~GHVD~GKSTL~g~L~~~~~~~~~~~~~~~~~~D~~~eEr~rGiTid~~~~~~et~~~~~~~iD~PG------- 84 (409)
T CHL00071 12 HVNIGTIGHVDHGKTTLTAAITMTLAANGGAKGKKYDEIDSAPEEKARGITINTAHVEYETENRHYAHVDCPG------- 84 (409)
T ss_pred EEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHCCCEEEECEEEEECCCEEEEEEECCC-------
T ss_conf 6999999545883999999986453004513343155323797687369448802489962875999986796-------
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHCCCCCEEE-EEECCCHHHHHHHHHHH-HHHH---CCCC
Q ss_conf 57532100234555532100110000100000001223454428720257-87211010434578888-6410---0123
Q gi|254780941|r 87 YHKLMIRLSWSTIKHADIVCLVVDSHRELKVNIHDLLKEIAKRSSRLILI-LNKIDCVKPERLLEQAE-IANK---LVFI 161 (311)
Q Consensus 87 l~~~~~~~~~~~l~~aDiil~VvDa~~~~~~~~~~il~~l~~~~~p~IiV-lNKiDlv~~~~l~~~~~-~~~~---~~~~ 161 (311)
T Consensus 85 -H~~fv~nmi~Gas~aD~alLVV~A~~G~~~QTkEHl~l~~~lgV~~~IVavnKmD~v~~~~~~e~i~~~i~~~l~~~g~ 163 (409)
T CHL00071 85 -HADYVKNMITGAAQMDGAILVVSAADGPMPQTKEHILLAKQVGVPNIVVFLNKEDQVDDEELLELVELEVRELLDKYDF 163 (409)
T ss_pred -HHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf -7899999875230158128999868788500499999999739993655555679854899999999999999997399
Q ss_pred ----CCCCCCCCCCCC------------------CHHHHHHHHHHHCC
Q ss_conf ----343110001387------------------42678999998366
Q gi|254780941|r 162 ----EKTFMVSATKGH------------------GCDDVLNYLCSTLP 187 (311)
Q Consensus 162 ----~~i~~ISAk~g~------------------Gid~L~~~L~~~lp 187 (311)
T Consensus 164 ~~~~i~~vp~sa~~~~~~~~~~~~~~~~~~~w~~~~~~Ll~~l~~~~p 211 (409)
T CHL00071 164 PGDEIPIVAGSALLALEALIENPKIKRGENKWVDKIYNLMDAVDSYIP 211 (409)
T ss_pred CCCCCEEEECCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 845560896521332343125875455656124479999998872377