HHsearch alignment for GI: 254780941 and conserved domain: CHL00189
>CHL00189 infB translation initiation factor 2; Provisional.
Probab=99.84 E-value=1.5e-20 Score=152.88 Aligned_cols=157 Identities=23% Similarity=0.314 Sum_probs=116.4
Q ss_pred CCCCEEEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCEEEEEEEEEEE------CCEEEEEEECCCCHHHCCCCCCCCC
Q ss_conf 8512189983389986889999986892021058888602127899973------9948999987984010123575321
Q gi|254780941|r 19 NSRSGCVALVGATNAGKSTLVNRFVGAKVSIVTHKVQTTRSIVRGIVSE------KESQIVFLDTPGIFNAKDSYHKLMI 92 (311)
Q Consensus 19 ~~ksg~VaivG~pN~GKSTL~N~l~g~~vsivS~k~~TTr~~i~gi~~~------~~~qiifvDTPG~~~~~~~l~~~~~ 92 (311)
T Consensus 269 ~~RpPVVTIMGHVDHGKTsLLD~iR~t~Va~~-EaGGITQh--IGAy~V~~~~~~~~~~ITFlDTPGH-e-------AFt 337 (770)
T CHL00189 269 IRRPPIVTILGHVDHGKTTLLDAIRKTNIAQK-EAGGITQK--IGAYEVEVPYKDQNQKIVFLDTPGH-E-------AFS 337 (770)
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHCCCCCCC-CCCCCCCE--ECEEEEEECCCCCCCEEEEECCCCH-H-------HHH
T ss_conf 77899899857725772037888852885134-56765550--3529997515788975899559946-8-------899
Q ss_pred CHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHCCCCCEEEEEECCCHH--HHHHHHHHH----HHHHCCCCCCCCC
Q ss_conf 0023455553210011000010000000122345442872025787211010--434578888----6410012334311
Q gi|254780941|r 93 RLSWSTIKHADIVCLVVDSHRELKVNIHDLLKEIAKRSSRLILILNKIDCVK--PERLLEQAE----IANKLVFIEKTFM 166 (311)
Q Consensus 93 ~~~~~~l~~aDiil~VvDa~~~~~~~~~~il~~l~~~~~p~IiVlNKiDlv~--~~~l~~~~~----~~~~~~~~~~i~~ 166 (311)
T Consensus 338 ~MRaRGA~vTDIvILVVAADDGVmPQTiEAI~hakaA~VPiIVAINKiDkp~an~~rVk~eL~e~gli~EewGGd~~~V~ 417 (770)
T CHL00189 338 SMRSRGANVTDIAILIVAADDGVKPQTIEAINHIQAANVPIIVAINKIDKENANIDRVKQELSKYNLISEKWGGQTPMIP 417 (770)
T ss_pred HHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCHHHCCCCEEEEE
T ss_conf 99862786666799999657885672799999998769988999877458998857899999986955222379559999
Q ss_pred CCCCCCCCHHHHHHHHHHHC
Q ss_conf 00013874267899999836
Q gi|254780941|r 167 VSATKGHGCDDVLNYLCSTL 186 (311)
Q Consensus 167 ISAk~g~Gid~L~~~L~~~l 186 (311)
T Consensus 418 ISAktg~gId~LLE~IlL~A 437 (770)
T CHL00189 418 ISALQGTNIDKLLEMILLLA 437 (770)
T ss_pred EEECCCCCHHHHHHHHHHHH
T ss_conf 66167988799999999998