HHsearch alignment for GI: 254780941 and conserved domain: COG0012
>COG0012 Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis].
Probab=99.69 E-value=8.7e-17 Score=128.46 Aligned_cols=88 Identities=23% Similarity=0.265 Sum_probs=71.9
Q ss_pred EEEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCEEEEEEEEEEECCE------------------EEEEEECCCCHHHC
Q ss_conf 189983389986889999986892021058888602127899973994------------------89999879840101
Q gi|254780941|r 23 GCVALVGATNAGKSTLVNRFVGAKVSIVTHKVQTTRSIVRGIVSEKES------------------QIVFLDTPGIFNAK 84 (311)
Q Consensus 23 g~VaivG~pN~GKSTL~N~l~g~~vsivS~k~~TTr~~i~gi~~~~~~------------------qiifvDTPG~~~~~ 84 (311)
T Consensus 3 l~~GIVGlPNVGKSTlFnAlT~~~-a~~aNYPF~TIePN~Giv~v~d~rl~~L~~~~~c~~k~~~~~ve~vDIAGLV~GA 81 (372)
T COG0012 3 LKIGIVGLPNVGKSTLFNALTKAG-AEIANYPFCTIEPNVGVVYVPDCRLDELAEIVKCPPKIRPAPVEFVDIAGLVKGA 81 (372)
T ss_pred CEEEEECCCCCCHHHHHHHHHCCC-CCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCC
T ss_conf 426774189885888999997489-6424898542657732796473678999875389974776104899824537885
Q ss_pred CCCCCCCCCHHHHHHHHHHHHCCCCHHH
Q ss_conf 2357532100234555532100110000
Q gi|254780941|r 85 DSYHKLMIRLSWSTIKHADIVCLVVDSH 112 (311)
Q Consensus 85 ~~l~~~~~~~~~~~l~~aDiil~VvDa~ 112 (311)
T Consensus 82 s~-GeGLGNkFL~~IRevdaI~hVVr~f 108 (372)
T COG0012 82 SK-GEGLGNKFLDNIREVDAIIHVVRCF 108 (372)
T ss_pred CC-CCCCCHHHHHHHHHCCEEEEEEEEC
T ss_conf 46-8886478787655148589999853