HHsearch alignment for GI: 254780941 and conserved domain: COG0378
>COG0378 HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription].
Probab=98.92 E-value=5.6e-09 Score=77.94 Aligned_cols=147 Identities=19% Similarity=0.276 Sum_probs=84.9
Q ss_pred EEEEEECCCCCCHHHHHHHHHCC-----CEEEECCCCCCE----------EEEEEEEEEECCE-----------------
Q ss_conf 18998338998688999998689-----202105888860----------2127899973994-----------------
Q gi|254780941|r 23 GCVALVGATNAGKSTLVNRFVGA-----KVSIVTHKVQTT----------RSIVRGIVSEKES----------------- 70 (311)
Q Consensus 23 g~VaivG~pN~GKSTL~N~l~g~-----~vsivS~k~~TT----------r~~i~gi~~~~~~----------------- 70 (311)
T Consensus 14 ~~i~v~Gp~GSGKTaLie~~~~~L~~~~~~aVI~~Di~t~~Da~~l~~~~g~~i~~v~TG~~CH~da~m~~~ai~~l~~~ 93 (202)
T COG0378 14 LRIGVGGPPGSGKTALIEKTLRALKDEYKIAVITGDIYTKEDADRLRKLPGEPIIGVETGKGCHLDASMNLEAIEELVLD 93 (202)
T ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHHCCEEEEECEEECHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHC
T ss_conf 89996179986789999999999975277689964040065599997377980687403876588678899999998631
Q ss_pred ----EEEEEECCC-CHHHCCCCCCCCCCHHHHHHHHHH-HHCCCCHHHHHHHCCHHHHHHHHHHCCCCCEEEEEECCCHH
Q ss_conf ----899998798-401012357532100234555532-10011000010000000122345442872025787211010
Q gi|254780941|r 71 ----QIVFLDTPG-IFNAKDSYHKLMIRLSWSTIKHAD-IVCLVVDSHRELKVNIHDLLKEIAKRSSRLILILNKIDCVK 144 (311)
Q Consensus 71 ----qiifvDTPG-~~~~~~~l~~~~~~~~~~~l~~aD-iil~VvDa~~~~~~~~~~il~~l~~~~~p~IiVlNKiDlv~ 144 (311)
T Consensus 94 ~~~~Dll~iEs~GNL~~~-------------~sp~L~d~~~v~VidvteGe~~P-~K~gP~i~~a---DllVInK~DLa~ 156 (202)
T COG0378 94 FPDLDLLFIESVGNLVCP-------------FSPDLGDHLRVVVIDVTEGEDIP-RKGGPGIFKA---DLLVINKTDLAP 156 (202)
T ss_pred CCCCCEEEEECCCCEECC-------------CCCCHHHCEEEEEEECCCCCCCC-CCCCCCEEEE---EEEEEEHHHHHH
T ss_conf 776778999237643244-------------68041304699999878888876-5579964674---189985677387
Q ss_pred HHH--HHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 434--578888641001233431100013874267899999836
Q gi|254780941|r 145 PER--LLEQAEIANKLVFIEKTFMVSATKGHGCDDVLNYLCSTL 186 (311)
Q Consensus 145 ~~~--l~~~~~~~~~~~~~~~i~~ISAk~g~Gid~L~~~L~~~l 186 (311)
T Consensus 157 ~v~~dlevm~~da~~~np~~~ii~~n~ktg~G~~~~~~~i~~~~ 200 (202)
T COG0378 157 YVGADLEVMARDAKEVNPEAPIIFTNLKTGEGLDEWLRFIEPQA 200 (202)
T ss_pred HHCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHC
T ss_conf 72866999999999849999889984787868999999987640