HHsearch alignment for GI: 254780941 and conserved domain: COG1162

Probab=98.87  E-value=3.1e-09  Score=79.63  Aligned_cols=58  Identities=28%  Similarity=0.393  Sum_probs=34.5

Q ss_pred             CCEEEEEECCCCCCHHHHHHHHHCC---CEEEECCC----CCCEEEEEEEEEEE-CCEEEEEEECCCCHH
Q ss_conf             1218998338998688999998689---20210588----88602127899973-994899998798401
Q gi|254780941|r   21 RSGCVALVGATNAGKSTLVNRFVGA---KVSIVTHK----VQTTRSIVRGIVSE-KESQIVFLDTPGIFN   82 (311)
Q Consensus        21 ksg~VaivG~pN~GKSTL~N~l~g~---~vsivS~k----~~TTr~~i~gi~~~-~~~qiifvDTPG~~~   82 (311)
T Consensus       163 ~~~~svl~GqSGVGKSSLiN~L~p~~~~~t~eIS~~~~rGkHTTt~~~l--~~l~~gG~--iiDTPGf~~  228 (301)
T COG1162         163 AGKITVLLGQSGVGKSTLINALLPELNQKTGEISEKLGRGRHTTTHVEL--FPLPGGGW--IIDTPGFRS  228 (301)
T ss_pred             CCCEEEEECCCCCCHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCEEEE--EECCCCCE--EEECCCCCC
T ss_conf             5884999888877699988741721211344210447898876324899--98389988--972899771