HHsearch alignment for GI: 254780941 and conserved domain: COG1162
>COG1162 Predicted GTPases [General function prediction only].
Probab=97.02 E-value=0.00082 Score=44.54 Aligned_cols=87 Identities=18% Similarity=0.212 Sum_probs=54.9
Q ss_pred HHHHHHHCCCCHHHHHH-HC-CHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHH-HHHHHHHCCCCCCCCCCCCCCCCCH
Q ss_conf 55532100110000100-00-000122345442872025787211010434578-8886410012334311000138742
Q gi|254780941|r 99 IKHADIVCLVVDSHREL-KV-NIHDLLKEIAKRSSRLILILNKIDCVKPERLLE-QAEIANKLVFIEKTFMVSATKGHGC 175 (311)
Q Consensus 99 l~~aDiil~VvDa~~~~-~~-~~~~il~~l~~~~~p~IiVlNKiDlv~~~~l~~-~~~~~~~~~~~~~i~~ISAk~g~Gi 175 (311)
T Consensus 77 v~n~d~~iiIvs~~~P~~~~~~ldR~Lv~ae~~gi~pvIvlnK~DL~~~~~~~~~~~~~~y~~~g-y~v~~~s~~~~~~~ 155 (301)
T COG1162 77 VANNDQAIIVVSLVDPDFNTNLLDRYLVLAEAGGIEPVIVLNKIDLLDDEEAAVKELLREYEDIG-YPVLFVSAKNGDGL 155 (301)
T ss_pred CCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCC-EEEEEECCCCCCCH
T ss_conf 26655199999626899898899999999977699579999753367616778999999998679-35999537676558
Q ss_pred HHHHHHHHHHC
Q ss_conf 67899999836
Q gi|254780941|r 176 DDVLNYLCSTL 186 (311)
Q Consensus 176 d~L~~~L~~~l 186 (311)
T Consensus 156 ~~l~~~l~~~~ 166 (301)
T COG1162 156 EELAELLAGKI 166 (301)
T ss_pred HHHHHHHCCCE
T ss_conf 99999755884