HHsearch alignment for GI: 254780941 and conserved domain: COG1419

Probab=97.97  E-value=9.1e-06  Score=57.19  Aligned_cols=118  Identities=22%  Similarity=0.297  Sum_probs=65.0

Q ss_pred             CCEEEEEECCCCCCHHHHHHHHHCC--------CEEEECCCCCCEEE---------------EEEEEE----------EE
Q ss_conf             1218998338998688999998689--------20210588886021---------------278999----------73
Q gi|254780941|r   21 RSGCVALVGATNAGKSTLVNRFVGA--------KVSIVTHKVQTTRS---------------IVRGIV----------SE   67 (311)
Q Consensus        21 ksg~VaivG~pN~GKSTL~N~l~g~--------~vsivS~k~~TTr~---------------~i~gi~----------~~   67 (311)
T Consensus       202 ~~~vi~LVGPTGVGKTTTlAKLAar~~~~~~~~kVaiITt--DtYRIGA~EQLk~Ya~im~vp~~vv~~~~el~~ai~~l  279 (407)
T COG1419         202 QKRVIALVGPTGVGKTTTLAKLAARYVMLKKKKKVAIITT--DTYRIGAVEQLKTYADIMGVPLEVVYSPKELAEAIEAL  279 (407)
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEE--CCCHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHH
T ss_conf             6857999899887588799999999975325760689971--44115289999999998699559963999999999985


Q ss_pred             CCEEEEEEECCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHCCCCCEEEEEECCCHH
Q ss_conf             99489999879840101235753210023455553210011000010000000122345442872025787211010
Q gi|254780941|r   68 KESQIVFLDTPGIFNAKDSYHKLMIRLSWSTIKHADIVCLVVDSHRELKVNIHDLLKEIAKRSSRLILILNKIDCVK  144 (311)
Q Consensus        68 ~~~qiifvDTPG~~~~~~~l~~~~~~~~~~~l~~aDiil~VvDa~~~~~~~~~~il~~l~~~~~p~IiVlNKiDlv~  144 (311)
T Consensus       280 ~~~d~ILVDTaGrs-~~D~~~i~el~~~~~~~~~-i~~~Lvlsat~K-~~dlkei~~~f~~~~i-~~~I~TKlDET~  352 (407)
T COG1419         280 RDCDVILVDTAGRS-QYDKEKIEELKELIDVSHS-IEVYLVLSATTK-YEDLKEIIKQFSLFPI-DGLIFTKLDETT  352 (407)
T ss_pred             HCCCEEEEECCCCC-CCCHHHHHHHHHHHHCCCC-CEEEEEEECCCC-HHHHHHHHHHHCCCCC-CEEEEECCCCCC
T ss_conf             31888999689988-3378999999999703566-217999845764-6889999997245886-616897133567