HHsearch alignment for GI: 254780941 and conserved domain: COG5256

>COG5256 TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis].
Probab=99.54  E-value=6.6e-14  Score=109.86  Aligned_cols=156  Identities=24%  Similarity=0.309  Sum_probs=100.5

Q ss_pred             EEEEEECCCCCCHHHHHHHHHCC------------------------CEEEECCCC------CCEEEEEEEEEEECCEEE
Q ss_conf             18998338998688999998689------------------------202105888------860212789997399489
Q gi|254780941|r   23 GCVALVGATNAGKSTLVNRFVGA------------------------KVSIVTHKV------QTTRSIVRGIVSEKESQI   72 (311)
Q Consensus        23 g~VaivG~pN~GKSTL~N~l~g~------------------------~vsivS~k~------~TTr~~i~gi~~~~~~qi   72 (311)
T Consensus         8 ~nl~~iGHVD~GKSTl~GrLly~~G~id~~tmeK~~~ea~~~gK~sf~fawvlD~tkeERerGvTi~~~~~~fet~k~~~   87 (428)
T COG5256           8 LNLVFIGHVDAGKSTLVGRLLYDLGEIDKRTMEKLEKEAKELGKESFKFAWVLDKTKEERERGVTIDVAHSKFETDKYNF   87 (428)
T ss_pred             EEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHCCEEEEEEEEEEECCCCEE
T ss_conf             28999837878703445565777379798999999999986197716899985388667866668997778864377058


Q ss_pred             EEEECCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHH-------HHCCHHHHHHHHHHCCCC-CEEEEEECCCHH
Q ss_conf             999879840101235753210023455553210011000010-------000000122345442872-025787211010
Q gi|254780941|r   73 VFLDTPGIFNAKDSYHKLMIRLSWSTIKHADIVCLVVDSHRE-------LKVNIHDLLKEIAKRSSR-LILILNKIDCVK  144 (311)
Q Consensus        73 ifvDTPG~~~~~~~l~~~~~~~~~~~l~~aDiil~VvDa~~~-------~~~~~~~il~~l~~~~~p-~IiVlNKiDlv~  144 (311)
T Consensus        88 tIiDaPG-H-------rdFvknmItGasqAD~aVLVV~a~~~efE~g~~~~gQtrEH~~La~tlGi~~lIVavNKMD~v~  159 (428)
T COG5256          88 TIIDAPG-H-------RDFVKNMITGASQADVAVLVVDARDGEFEAGFGVGGQTREHAFLARTLGIKQLIVAVNKMDLVS  159 (428)
T ss_pred             EEEECCC-H-------HHHHHHHHCCHHHCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCC
T ss_conf             9960784-6-------7789876313313367999998889831014365875167899998569756999997156666


Q ss_pred             H--HH---HHHHHHHHHHCCCCC----CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC
Q ss_conf             4--34---578888641001233----4311000138742678999998366223568
Q gi|254780941|r  145 P--ER---LLEQAEIANKLVFIE----KTFMVSATKGHGCDDVLNYLCSTLPLAPWVY  193 (311)
Q Consensus       145 ~--~~---l~~~~~~~~~~~~~~----~i~~ISAk~g~Gid~L~~~L~~~lpe~~~~y  193 (311)
T Consensus       160 wde~rf~ei~~~v~~l~k~~G~~~~~v~FIPiSg~~G~Nl~~~s-------~~~pWY~  210 (428)
T COG5256         160 WDEERFEEIVSEVSKLLKMVGYNPKDVPFIPISGFKGDNLTKKS-------ENMPWYK  210 (428)
T ss_pred             CCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCC-------CCCCCCC
T ss_conf             27999999999999999971998667707962244677633267-------6786724